Multiple sequence alignment - TraesCS5B01G088800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G088800 chr5B 100.000 2677 0 0 1 2677 114126099 114123423 0.000000e+00 4944.0
1 TraesCS5B01G088800 chr5A 93.502 1739 76 18 646 2363 107446340 107444618 0.000000e+00 2551.0
2 TraesCS5B01G088800 chr5A 88.672 256 27 2 2283 2538 107444623 107444370 7.200000e-81 311.0
3 TraesCS5B01G088800 chr5A 80.833 360 34 13 327 654 107451725 107451369 1.590000e-62 250.0
4 TraesCS5B01G088800 chr5D 93.588 1544 55 18 436 1948 104481255 104479725 0.000000e+00 2263.0
5 TraesCS5B01G088800 chr5D 92.484 306 17 6 20 324 430510521 430510221 1.470000e-117 433.0
6 TraesCS5B01G088800 chr3B 95.470 287 12 1 41 326 17350287 17350573 8.730000e-125 457.0
7 TraesCS5B01G088800 chr3B 88.889 54 6 0 346 399 205931091 205931038 1.720000e-07 67.6
8 TraesCS5B01G088800 chr2B 95.470 287 12 1 41 326 91176750 91177036 8.730000e-125 457.0
9 TraesCS5B01G088800 chr2B 94.810 289 13 2 43 330 774874620 774874333 1.460000e-122 449.0
10 TraesCS5B01G088800 chr2B 90.909 154 11 2 2524 2677 229650786 229650936 1.260000e-48 204.0
11 TraesCS5B01G088800 chr4B 94.539 293 13 3 38 328 115097880 115097589 1.460000e-122 449.0
12 TraesCS5B01G088800 chr4B 95.000 140 6 1 2539 2677 355770078 355770217 4.490000e-53 219.0
13 TraesCS5B01G088800 chr4A 94.810 289 14 1 41 328 619765762 619765474 1.460000e-122 449.0
14 TraesCS5B01G088800 chr1B 94.502 291 14 2 41 329 625144203 625144493 5.260000e-122 448.0
15 TraesCS5B01G088800 chr1B 94.245 139 8 0 2539 2677 411553235 411553373 2.090000e-51 213.0
16 TraesCS5B01G088800 chr6B 94.774 287 13 2 43 327 149443371 149443085 1.890000e-121 446.0
17 TraesCS5B01G088800 chr6B 94.203 138 8 0 2540 2677 153523217 153523080 7.510000e-51 211.0
18 TraesCS5B01G088800 chr2D 94.198 293 15 2 39 329 590369244 590369536 1.890000e-121 446.0
19 TraesCS5B01G088800 chr7D 94.964 139 7 0 2539 2677 459000337 459000199 4.490000e-53 219.0
20 TraesCS5B01G088800 chrUn 94.161 137 8 0 2539 2675 281108609 281108745 2.700000e-50 209.0
21 TraesCS5B01G088800 chrUn 92.958 142 10 0 2536 2677 269924773 269924914 9.710000e-50 207.0
22 TraesCS5B01G088800 chrUn 92.958 142 10 0 2536 2677 269933115 269933256 9.710000e-50 207.0
23 TraesCS5B01G088800 chrUn 92.958 142 10 0 2536 2677 292219906 292219765 9.710000e-50 207.0
24 TraesCS5B01G088800 chr3A 76.510 298 60 8 2139 2430 303458359 303458652 1.280000e-33 154.0
25 TraesCS5B01G088800 chr7A 74.747 297 69 5 2142 2434 639231699 639231405 7.780000e-26 128.0
26 TraesCS5B01G088800 chr7A 90.741 54 5 0 346 399 187228593 187228646 3.700000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G088800 chr5B 114123423 114126099 2676 True 4944 4944 100.000 1 2677 1 chr5B.!!$R1 2676
1 TraesCS5B01G088800 chr5A 107444370 107446340 1970 True 1431 2551 91.087 646 2538 2 chr5A.!!$R2 1892
2 TraesCS5B01G088800 chr5D 104479725 104481255 1530 True 2263 2263 93.588 436 1948 1 chr5D.!!$R1 1512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
386 387 0.321298 AATGACACCCGAAAGTCCCG 60.321 55.0 0.0 0.0 33.89 5.14 F
995 1028 0.323178 ATGAGCTGAGCTTTGGGTGG 60.323 55.0 9.0 0.0 39.88 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1656 1695 0.105658 CAATACGGGGAGGAGGAGGA 60.106 60.0 0.0 0.0 0.0 3.71 R
2496 2614 0.034574 TGGTGGCTATTGTTGGCGAT 60.035 50.0 0.0 0.0 0.0 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 8.534333 TGTACTAACTCAGCAACAATTAAGAG 57.466 34.615 0.00 0.00 0.00 2.85
46 47 7.602644 TGTACTAACTCAGCAACAATTAAGAGG 59.397 37.037 0.00 0.00 0.00 3.69
47 48 5.940470 ACTAACTCAGCAACAATTAAGAGGG 59.060 40.000 0.00 0.00 0.00 4.30
48 49 4.373156 ACTCAGCAACAATTAAGAGGGT 57.627 40.909 0.00 0.00 0.00 4.34
49 50 4.074970 ACTCAGCAACAATTAAGAGGGTG 58.925 43.478 0.00 0.00 0.00 4.61
50 51 4.074970 CTCAGCAACAATTAAGAGGGTGT 58.925 43.478 0.00 0.00 0.00 4.16
51 52 4.469657 TCAGCAACAATTAAGAGGGTGTT 58.530 39.130 0.00 0.00 34.60 3.32
52 53 4.892934 TCAGCAACAATTAAGAGGGTGTTT 59.107 37.500 0.00 0.00 31.98 2.83
53 54 4.984161 CAGCAACAATTAAGAGGGTGTTTG 59.016 41.667 0.00 0.00 31.98 2.93
54 55 4.649218 AGCAACAATTAAGAGGGTGTTTGT 59.351 37.500 0.00 0.00 31.98 2.83
55 56 5.128663 AGCAACAATTAAGAGGGTGTTTGTT 59.871 36.000 0.00 0.00 37.68 2.83
56 57 5.815222 GCAACAATTAAGAGGGTGTTTGTTT 59.185 36.000 0.00 0.00 35.70 2.83
57 58 6.019075 GCAACAATTAAGAGGGTGTTTGTTTC 60.019 38.462 0.00 0.00 35.70 2.78
58 59 6.156748 ACAATTAAGAGGGTGTTTGTTTCC 57.843 37.500 0.00 0.00 0.00 3.13
59 60 5.659079 ACAATTAAGAGGGTGTTTGTTTCCA 59.341 36.000 0.00 0.00 0.00 3.53
60 61 6.183360 ACAATTAAGAGGGTGTTTGTTTCCAG 60.183 38.462 0.00 0.00 0.00 3.86
61 62 2.364972 AGAGGGTGTTTGTTTCCAGG 57.635 50.000 0.00 0.00 0.00 4.45
62 63 1.133482 AGAGGGTGTTTGTTTCCAGGG 60.133 52.381 0.00 0.00 0.00 4.45
63 64 0.930726 AGGGTGTTTGTTTCCAGGGA 59.069 50.000 0.00 0.00 0.00 4.20
64 65 1.037493 GGGTGTTTGTTTCCAGGGAC 58.963 55.000 0.00 0.00 0.00 4.46
65 66 1.411074 GGGTGTTTGTTTCCAGGGACT 60.411 52.381 0.00 0.00 43.88 3.85
66 67 2.384828 GGTGTTTGTTTCCAGGGACTT 58.615 47.619 0.00 0.00 34.60 3.01
67 68 3.558033 GGTGTTTGTTTCCAGGGACTTA 58.442 45.455 0.00 0.00 34.60 2.24
68 69 4.149598 GGTGTTTGTTTCCAGGGACTTAT 58.850 43.478 0.00 0.00 34.60 1.73
69 70 4.587262 GGTGTTTGTTTCCAGGGACTTATT 59.413 41.667 0.00 0.00 34.60 1.40
70 71 5.508994 GGTGTTTGTTTCCAGGGACTTATTG 60.509 44.000 0.00 0.00 34.60 1.90
71 72 4.586841 TGTTTGTTTCCAGGGACTTATTGG 59.413 41.667 0.00 0.00 34.60 3.16
72 73 2.802719 TGTTTCCAGGGACTTATTGGC 58.197 47.619 0.00 0.00 34.60 4.52
73 74 2.378547 TGTTTCCAGGGACTTATTGGCT 59.621 45.455 0.00 0.00 34.60 4.75
74 75 3.181423 TGTTTCCAGGGACTTATTGGCTT 60.181 43.478 0.00 0.00 34.60 4.35
75 76 4.043561 TGTTTCCAGGGACTTATTGGCTTA 59.956 41.667 0.00 0.00 34.60 3.09
76 77 4.503714 TTCCAGGGACTTATTGGCTTAG 57.496 45.455 0.00 0.00 34.60 2.18
77 78 2.777692 TCCAGGGACTTATTGGCTTAGG 59.222 50.000 0.00 0.00 34.60 2.69
78 79 2.158608 CCAGGGACTTATTGGCTTAGGG 60.159 54.545 0.00 0.00 34.60 3.53
79 80 2.777692 CAGGGACTTATTGGCTTAGGGA 59.222 50.000 0.00 0.00 34.60 4.20
80 81 2.778270 AGGGACTTATTGGCTTAGGGAC 59.222 50.000 0.00 0.00 27.25 4.46
81 82 2.778270 GGGACTTATTGGCTTAGGGACT 59.222 50.000 0.00 0.00 46.37 3.85
82 83 3.202373 GGGACTTATTGGCTTAGGGACTT 59.798 47.826 0.00 0.00 41.75 3.01
83 84 4.411212 GGGACTTATTGGCTTAGGGACTTA 59.589 45.833 0.00 0.00 41.75 2.24
84 85 5.104235 GGGACTTATTGGCTTAGGGACTTAA 60.104 44.000 0.00 0.00 41.75 1.85
85 86 6.420638 GGACTTATTGGCTTAGGGACTTAAA 58.579 40.000 0.00 0.00 41.75 1.52
86 87 6.888088 GGACTTATTGGCTTAGGGACTTAAAA 59.112 38.462 0.00 0.00 41.75 1.52
87 88 7.395206 GGACTTATTGGCTTAGGGACTTAAAAA 59.605 37.037 0.00 0.00 41.75 1.94
113 114 8.798975 AATCTCTATAAGTCCCATCTAAACCA 57.201 34.615 0.00 0.00 0.00 3.67
114 115 8.798975 ATCTCTATAAGTCCCATCTAAACCAA 57.201 34.615 0.00 0.00 0.00 3.67
115 116 8.618240 TCTCTATAAGTCCCATCTAAACCAAA 57.382 34.615 0.00 0.00 0.00 3.28
116 117 8.483758 TCTCTATAAGTCCCATCTAAACCAAAC 58.516 37.037 0.00 0.00 0.00 2.93
117 118 8.153221 TCTATAAGTCCCATCTAAACCAAACA 57.847 34.615 0.00 0.00 0.00 2.83
118 119 8.265055 TCTATAAGTCCCATCTAAACCAAACAG 58.735 37.037 0.00 0.00 0.00 3.16
119 120 4.993705 AGTCCCATCTAAACCAAACAGA 57.006 40.909 0.00 0.00 0.00 3.41
120 121 5.319043 AGTCCCATCTAAACCAAACAGAA 57.681 39.130 0.00 0.00 0.00 3.02
121 122 5.316987 AGTCCCATCTAAACCAAACAGAAG 58.683 41.667 0.00 0.00 0.00 2.85
122 123 4.459337 GTCCCATCTAAACCAAACAGAAGG 59.541 45.833 0.00 0.00 0.00 3.46
123 124 4.352595 TCCCATCTAAACCAAACAGAAGGA 59.647 41.667 0.00 0.00 30.43 3.36
124 125 4.459337 CCCATCTAAACCAAACAGAAGGAC 59.541 45.833 0.00 0.00 30.43 3.85
125 126 5.316987 CCATCTAAACCAAACAGAAGGACT 58.683 41.667 0.00 0.00 30.43 3.85
126 127 5.770162 CCATCTAAACCAAACAGAAGGACTT 59.230 40.000 0.00 0.00 30.43 3.01
127 128 6.940298 CCATCTAAACCAAACAGAAGGACTTA 59.060 38.462 0.00 0.00 30.43 2.24
128 129 7.611855 CCATCTAAACCAAACAGAAGGACTTAT 59.388 37.037 0.00 0.00 30.43 1.73
129 130 9.667107 CATCTAAACCAAACAGAAGGACTTATA 57.333 33.333 0.00 0.00 0.00 0.98
130 131 9.892130 ATCTAAACCAAACAGAAGGACTTATAG 57.108 33.333 0.00 0.00 0.00 1.31
131 132 8.319146 TCTAAACCAAACAGAAGGACTTATAGG 58.681 37.037 0.00 0.00 0.00 2.57
132 133 5.437191 ACCAAACAGAAGGACTTATAGGG 57.563 43.478 0.00 0.00 0.00 3.53
133 134 5.098663 ACCAAACAGAAGGACTTATAGGGA 58.901 41.667 0.00 0.00 0.00 4.20
134 135 5.045797 ACCAAACAGAAGGACTTATAGGGAC 60.046 44.000 0.00 0.00 0.00 4.46
135 136 5.189934 CCAAACAGAAGGACTTATAGGGACT 59.810 44.000 0.00 0.00 46.37 3.85
136 137 6.296489 CCAAACAGAAGGACTTATAGGGACTT 60.296 42.308 0.00 0.00 41.75 3.01
137 138 7.093024 CCAAACAGAAGGACTTATAGGGACTTA 60.093 40.741 0.00 0.00 41.75 2.24
138 139 8.319146 CAAACAGAAGGACTTATAGGGACTTAA 58.681 37.037 0.00 0.00 41.75 1.85
139 140 8.445361 AACAGAAGGACTTATAGGGACTTAAA 57.555 34.615 0.00 0.00 41.75 1.52
140 141 8.080363 ACAGAAGGACTTATAGGGACTTAAAG 57.920 38.462 0.00 0.00 41.75 1.85
141 142 7.679025 ACAGAAGGACTTATAGGGACTTAAAGT 59.321 37.037 0.00 0.00 42.31 2.66
142 143 7.982354 CAGAAGGACTTATAGGGACTTAAAGTG 59.018 40.741 0.00 0.00 40.60 3.16
143 144 6.809976 AGGACTTATAGGGACTTAAAGTGG 57.190 41.667 0.00 0.00 40.60 4.00
144 145 5.666265 AGGACTTATAGGGACTTAAAGTGGG 59.334 44.000 0.00 0.00 40.60 4.61
145 146 5.366460 GACTTATAGGGACTTAAAGTGGGC 58.634 45.833 0.00 0.00 40.60 5.36
146 147 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
147 148 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
148 149 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
149 150 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
150 151 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
151 152 2.233676 GGGACTTAAAGTGGGCATTTGG 59.766 50.000 0.00 0.00 0.00 3.28
152 153 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
153 154 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
154 155 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
155 156 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
156 157 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
157 158 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
158 159 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
159 160 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
160 161 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
161 162 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
162 163 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
163 164 4.162131 GTGGGCATTTGGGACTTATGAAAT 59.838 41.667 0.00 0.00 0.00 2.17
164 165 5.362430 GTGGGCATTTGGGACTTATGAAATA 59.638 40.000 0.00 0.00 0.00 1.40
165 166 5.960811 TGGGCATTTGGGACTTATGAAATAA 59.039 36.000 0.00 0.00 36.20 1.40
180 181 5.683876 TGAAATAAGACTCTCAAGGAGGG 57.316 43.478 0.00 0.00 45.83 4.30
181 182 5.342017 TGAAATAAGACTCTCAAGGAGGGA 58.658 41.667 0.00 0.00 45.83 4.20
182 183 5.966935 TGAAATAAGACTCTCAAGGAGGGAT 59.033 40.000 0.00 0.00 45.83 3.85
183 184 6.445139 TGAAATAAGACTCTCAAGGAGGGATT 59.555 38.462 0.00 0.00 45.83 3.01
184 185 6.899892 AATAAGACTCTCAAGGAGGGATTT 57.100 37.500 0.00 0.00 45.83 2.17
185 186 7.996758 AATAAGACTCTCAAGGAGGGATTTA 57.003 36.000 0.00 0.00 45.83 1.40
186 187 8.574309 AATAAGACTCTCAAGGAGGGATTTAT 57.426 34.615 0.00 1.62 45.83 1.40
187 188 9.676129 AATAAGACTCTCAAGGAGGGATTTATA 57.324 33.333 0.00 0.00 45.83 0.98
188 189 7.610580 AAGACTCTCAAGGAGGGATTTATAG 57.389 40.000 0.00 0.00 45.83 1.31
189 190 6.081356 AGACTCTCAAGGAGGGATTTATAGG 58.919 44.000 0.00 0.00 45.83 2.57
190 191 5.158889 ACTCTCAAGGAGGGATTTATAGGG 58.841 45.833 0.00 0.00 45.83 3.53
191 192 5.102609 ACTCTCAAGGAGGGATTTATAGGGA 60.103 44.000 0.00 0.00 45.83 4.20
192 193 5.155905 TCTCAAGGAGGGATTTATAGGGAC 58.844 45.833 0.00 0.00 0.00 4.46
193 194 5.102609 TCTCAAGGAGGGATTTATAGGGACT 60.103 44.000 0.00 0.00 46.37 3.85
194 195 5.548573 TCAAGGAGGGATTTATAGGGACTT 58.451 41.667 0.00 0.00 41.75 3.01
195 196 6.699688 TCAAGGAGGGATTTATAGGGACTTA 58.300 40.000 0.00 0.00 41.75 2.24
196 197 7.321530 TCAAGGAGGGATTTATAGGGACTTAT 58.678 38.462 0.00 0.00 41.75 1.73
197 198 8.470109 TCAAGGAGGGATTTATAGGGACTTATA 58.530 37.037 0.00 0.00 41.75 0.98
198 199 9.285359 CAAGGAGGGATTTATAGGGACTTATAT 57.715 37.037 0.00 0.00 41.75 0.86
199 200 9.875725 AAGGAGGGATTTATAGGGACTTATATT 57.124 33.333 0.00 0.00 41.75 1.28
200 201 9.875725 AGGAGGGATTTATAGGGACTTATATTT 57.124 33.333 0.00 0.00 41.75 1.40
201 202 9.907229 GGAGGGATTTATAGGGACTTATATTTG 57.093 37.037 0.00 0.00 41.75 2.32
243 244 8.037382 GGACTTATAAGTACCAAGAACCAAAC 57.963 38.462 18.03 0.93 39.88 2.93
244 245 7.662669 GGACTTATAAGTACCAAGAACCAAACA 59.337 37.037 18.03 0.00 39.88 2.83
245 246 8.617290 ACTTATAAGTACCAAGAACCAAACAG 57.383 34.615 16.60 0.00 37.52 3.16
246 247 7.664318 ACTTATAAGTACCAAGAACCAAACAGG 59.336 37.037 16.60 0.00 39.72 4.00
262 263 6.120220 CCAAACAGGTAGGGACTTTATAAGG 58.880 44.000 0.00 0.00 41.75 2.69
263 264 6.069847 CCAAACAGGTAGGGACTTTATAAGGA 60.070 42.308 0.98 0.00 41.75 3.36
264 265 6.556974 AACAGGTAGGGACTTTATAAGGAC 57.443 41.667 0.98 0.00 41.75 3.85
265 266 5.851418 ACAGGTAGGGACTTTATAAGGACT 58.149 41.667 0.98 0.02 41.75 3.85
266 267 6.269974 ACAGGTAGGGACTTTATAAGGACTT 58.730 40.000 0.98 0.00 41.75 3.01
267 268 6.156429 ACAGGTAGGGACTTTATAAGGACTTG 59.844 42.308 0.98 0.00 41.75 3.16
268 269 5.666265 AGGTAGGGACTTTATAAGGACTTGG 59.334 44.000 0.98 0.00 41.75 3.61
269 270 5.163227 GGTAGGGACTTTATAAGGACTTGGG 60.163 48.000 0.98 0.00 41.75 4.12
270 271 4.706616 AGGGACTTTATAAGGACTTGGGA 58.293 43.478 0.98 0.00 27.25 4.37
271 272 4.473922 AGGGACTTTATAAGGACTTGGGAC 59.526 45.833 0.98 0.00 27.25 4.46
272 273 4.473922 GGGACTTTATAAGGACTTGGGACT 59.526 45.833 0.98 0.00 0.00 3.85
273 274 5.045066 GGGACTTTATAAGGACTTGGGACTT 60.045 44.000 0.98 0.00 0.00 3.01
274 275 6.157471 GGGACTTTATAAGGACTTGGGACTTA 59.843 42.308 0.98 0.00 0.00 2.24
275 276 7.147355 GGGACTTTATAAGGACTTGGGACTTAT 60.147 40.741 0.98 0.00 39.80 1.73
276 277 8.931568 GGACTTTATAAGGACTTGGGACTTATA 58.068 37.037 0.98 0.00 38.16 0.98
282 283 5.437191 AGGACTTGGGACTTATAAGTTGG 57.563 43.478 18.96 10.07 39.88 3.77
283 284 4.227527 AGGACTTGGGACTTATAAGTTGGG 59.772 45.833 18.96 10.37 39.88 4.12
284 285 4.226620 GGACTTGGGACTTATAAGTTGGGA 59.773 45.833 18.96 6.15 39.88 4.37
285 286 5.175388 ACTTGGGACTTATAAGTTGGGAC 57.825 43.478 18.96 6.19 39.88 4.46
286 287 4.850386 ACTTGGGACTTATAAGTTGGGACT 59.150 41.667 18.96 0.00 39.88 3.85
287 288 6.027482 ACTTGGGACTTATAAGTTGGGACTA 58.973 40.000 18.96 3.96 39.88 2.59
288 289 6.502863 ACTTGGGACTTATAAGTTGGGACTAA 59.497 38.462 18.96 10.32 39.88 2.24
289 290 6.956102 TGGGACTTATAAGTTGGGACTAAA 57.044 37.500 18.96 0.00 39.88 1.85
290 291 7.332433 TGGGACTTATAAGTTGGGACTAAAA 57.668 36.000 18.96 0.00 39.88 1.52
291 292 7.757611 TGGGACTTATAAGTTGGGACTAAAAA 58.242 34.615 18.96 0.00 39.88 1.94
318 319 7.365840 GTCCTAAGACTTATGAACCAAACAG 57.634 40.000 2.20 0.00 40.10 3.16
319 320 6.371825 GTCCTAAGACTTATGAACCAAACAGG 59.628 42.308 2.20 0.00 40.95 4.00
320 321 5.648092 CCTAAGACTTATGAACCAAACAGGG 59.352 44.000 0.00 0.00 43.89 4.45
321 322 3.421844 AGACTTATGAACCAAACAGGGC 58.578 45.455 0.00 0.00 43.89 5.19
322 323 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
323 324 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
324 325 3.332485 ACTTATGAACCAAACAGGGCCTA 59.668 43.478 5.28 0.00 43.89 3.93
325 326 2.990740 ATGAACCAAACAGGGCCTAA 57.009 45.000 5.28 0.00 43.89 2.69
326 327 2.990740 TGAACCAAACAGGGCCTAAT 57.009 45.000 5.28 0.00 43.89 1.73
327 328 4.601406 ATGAACCAAACAGGGCCTAATA 57.399 40.909 5.28 0.00 43.89 0.98
328 329 4.601406 TGAACCAAACAGGGCCTAATAT 57.399 40.909 5.28 0.00 43.89 1.28
329 330 4.277476 TGAACCAAACAGGGCCTAATATG 58.723 43.478 5.28 3.09 43.89 1.78
330 331 4.017958 TGAACCAAACAGGGCCTAATATGA 60.018 41.667 5.28 0.00 43.89 2.15
331 332 4.601406 ACCAAACAGGGCCTAATATGAA 57.399 40.909 5.28 0.00 43.89 2.57
332 333 5.142806 ACCAAACAGGGCCTAATATGAAT 57.857 39.130 5.28 0.00 43.89 2.57
333 334 5.528337 ACCAAACAGGGCCTAATATGAATT 58.472 37.500 5.28 0.00 43.89 2.17
334 335 5.963865 ACCAAACAGGGCCTAATATGAATTT 59.036 36.000 5.28 0.00 43.89 1.82
335 336 6.127083 ACCAAACAGGGCCTAATATGAATTTG 60.127 38.462 5.28 7.14 43.89 2.32
336 337 6.127083 CCAAACAGGGCCTAATATGAATTTGT 60.127 38.462 5.28 0.00 0.00 2.83
337 338 6.469782 AACAGGGCCTAATATGAATTTGTG 57.530 37.500 5.28 0.00 0.00 3.33
338 339 4.895297 ACAGGGCCTAATATGAATTTGTGG 59.105 41.667 5.28 0.00 0.00 4.17
339 340 5.139727 CAGGGCCTAATATGAATTTGTGGA 58.860 41.667 5.28 0.00 0.00 4.02
340 341 5.598005 CAGGGCCTAATATGAATTTGTGGAA 59.402 40.000 5.28 0.00 0.00 3.53
341 342 5.835280 AGGGCCTAATATGAATTTGTGGAAG 59.165 40.000 2.82 0.00 0.00 3.46
342 343 5.598417 GGGCCTAATATGAATTTGTGGAAGT 59.402 40.000 0.84 0.00 0.00 3.01
343 344 6.775629 GGGCCTAATATGAATTTGTGGAAGTA 59.224 38.462 0.84 0.00 0.00 2.24
344 345 7.451566 GGGCCTAATATGAATTTGTGGAAGTAT 59.548 37.037 0.84 0.00 0.00 2.12
345 346 8.515414 GGCCTAATATGAATTTGTGGAAGTATC 58.485 37.037 0.00 0.00 0.00 2.24
346 347 9.289782 GCCTAATATGAATTTGTGGAAGTATCT 57.710 33.333 0.00 0.00 0.00 1.98
350 351 9.799106 AATATGAATTTGTGGAAGTATCTAGGG 57.201 33.333 0.00 0.00 0.00 3.53
351 352 6.884472 TGAATTTGTGGAAGTATCTAGGGA 57.116 37.500 0.00 0.00 0.00 4.20
352 353 7.451731 TGAATTTGTGGAAGTATCTAGGGAT 57.548 36.000 0.00 0.00 36.07 3.85
353 354 7.282585 TGAATTTGTGGAAGTATCTAGGGATG 58.717 38.462 0.00 0.00 33.71 3.51
354 355 6.831664 ATTTGTGGAAGTATCTAGGGATGT 57.168 37.500 0.00 0.00 33.71 3.06
355 356 7.931015 ATTTGTGGAAGTATCTAGGGATGTA 57.069 36.000 0.00 0.00 33.71 2.29
356 357 7.743116 TTTGTGGAAGTATCTAGGGATGTAA 57.257 36.000 0.00 0.00 33.71 2.41
357 358 7.743116 TTGTGGAAGTATCTAGGGATGTAAA 57.257 36.000 0.00 0.00 33.71 2.01
358 359 7.931015 TGTGGAAGTATCTAGGGATGTAAAT 57.069 36.000 0.00 0.00 33.71 1.40
359 360 7.735917 TGTGGAAGTATCTAGGGATGTAAATG 58.264 38.462 0.00 0.00 33.71 2.32
360 361 7.162082 GTGGAAGTATCTAGGGATGTAAATGG 58.838 42.308 0.00 0.00 33.71 3.16
361 362 6.174049 GGAAGTATCTAGGGATGTAAATGGC 58.826 44.000 0.00 0.00 33.71 4.40
362 363 6.239887 GGAAGTATCTAGGGATGTAAATGGCA 60.240 42.308 0.00 0.00 33.71 4.92
363 364 6.763715 AGTATCTAGGGATGTAAATGGCAA 57.236 37.500 0.00 0.00 33.71 4.52
364 365 7.149202 AGTATCTAGGGATGTAAATGGCAAA 57.851 36.000 0.00 0.00 33.71 3.68
365 366 7.759607 AGTATCTAGGGATGTAAATGGCAAAT 58.240 34.615 0.00 0.00 33.71 2.32
366 367 8.890472 AGTATCTAGGGATGTAAATGGCAAATA 58.110 33.333 0.00 0.00 33.71 1.40
367 368 9.515226 GTATCTAGGGATGTAAATGGCAAATAA 57.485 33.333 0.00 0.00 33.71 1.40
369 370 9.605951 ATCTAGGGATGTAAATGGCAAATAAAT 57.394 29.630 0.00 0.00 0.00 1.40
370 371 8.859090 TCTAGGGATGTAAATGGCAAATAAATG 58.141 33.333 0.00 0.00 0.00 2.32
371 372 7.673641 AGGGATGTAAATGGCAAATAAATGA 57.326 32.000 0.00 0.00 0.00 2.57
372 373 7.500141 AGGGATGTAAATGGCAAATAAATGAC 58.500 34.615 0.00 0.00 0.00 3.06
373 374 7.125507 AGGGATGTAAATGGCAAATAAATGACA 59.874 33.333 0.00 0.00 43.89 3.58
374 375 7.224557 GGGATGTAAATGGCAAATAAATGACAC 59.775 37.037 0.00 0.00 42.20 3.67
375 376 7.224557 GGATGTAAATGGCAAATAAATGACACC 59.775 37.037 0.00 0.00 42.20 4.16
376 377 6.402222 TGTAAATGGCAAATAAATGACACCC 58.598 36.000 0.00 0.00 42.20 4.61
377 378 3.799281 ATGGCAAATAAATGACACCCG 57.201 42.857 0.00 0.00 42.20 5.28
378 379 2.796557 TGGCAAATAAATGACACCCGA 58.203 42.857 0.00 0.00 32.00 5.14
379 380 3.157881 TGGCAAATAAATGACACCCGAA 58.842 40.909 0.00 0.00 32.00 4.30
380 381 3.574396 TGGCAAATAAATGACACCCGAAA 59.426 39.130 0.00 0.00 32.00 3.46
381 382 4.173256 GGCAAATAAATGACACCCGAAAG 58.827 43.478 0.00 0.00 0.00 2.62
382 383 4.321675 GGCAAATAAATGACACCCGAAAGT 60.322 41.667 0.00 0.00 0.00 2.66
383 384 4.857037 GCAAATAAATGACACCCGAAAGTC 59.143 41.667 0.00 0.00 35.37 3.01
384 385 5.399013 CAAATAAATGACACCCGAAAGTCC 58.601 41.667 0.00 0.00 33.89 3.85
385 386 1.905637 AAATGACACCCGAAAGTCCC 58.094 50.000 0.00 0.00 33.89 4.46
386 387 0.321298 AATGACACCCGAAAGTCCCG 60.321 55.000 0.00 0.00 33.89 5.14
387 388 1.477685 ATGACACCCGAAAGTCCCGT 61.478 55.000 0.00 0.00 33.89 5.28
388 389 1.070275 GACACCCGAAAGTCCCGTT 59.930 57.895 0.00 0.00 0.00 4.44
389 390 0.533531 GACACCCGAAAGTCCCGTTT 60.534 55.000 0.00 0.00 0.00 3.60
390 391 0.758123 ACACCCGAAAGTCCCGTTTA 59.242 50.000 0.00 0.00 0.00 2.01
391 392 1.270465 ACACCCGAAAGTCCCGTTTAG 60.270 52.381 0.00 0.00 0.00 1.85
392 393 1.051008 ACCCGAAAGTCCCGTTTAGT 58.949 50.000 0.00 0.00 0.00 2.24
393 394 1.417517 ACCCGAAAGTCCCGTTTAGTT 59.582 47.619 0.00 0.00 0.00 2.24
394 395 2.632512 ACCCGAAAGTCCCGTTTAGTTA 59.367 45.455 0.00 0.00 0.00 2.24
395 396 3.256558 CCCGAAAGTCCCGTTTAGTTAG 58.743 50.000 0.00 0.00 0.00 2.34
396 397 3.306294 CCCGAAAGTCCCGTTTAGTTAGT 60.306 47.826 0.00 0.00 0.00 2.24
397 398 4.309933 CCGAAAGTCCCGTTTAGTTAGTT 58.690 43.478 0.00 0.00 0.00 2.24
398 399 4.751600 CCGAAAGTCCCGTTTAGTTAGTTT 59.248 41.667 0.00 0.00 0.00 2.66
399 400 5.333568 CCGAAAGTCCCGTTTAGTTAGTTTG 60.334 44.000 0.00 0.00 0.00 2.93
400 401 5.463061 CGAAAGTCCCGTTTAGTTAGTTTGA 59.537 40.000 0.00 0.00 0.00 2.69
401 402 6.146673 CGAAAGTCCCGTTTAGTTAGTTTGAT 59.853 38.462 0.00 0.00 0.00 2.57
402 403 7.329226 CGAAAGTCCCGTTTAGTTAGTTTGATA 59.671 37.037 0.00 0.00 0.00 2.15
403 404 8.543862 AAAGTCCCGTTTAGTTAGTTTGATAG 57.456 34.615 0.00 0.00 0.00 2.08
404 405 7.237209 AGTCCCGTTTAGTTAGTTTGATAGT 57.763 36.000 0.00 0.00 0.00 2.12
405 406 7.674120 AGTCCCGTTTAGTTAGTTTGATAGTT 58.326 34.615 0.00 0.00 0.00 2.24
406 407 7.816513 AGTCCCGTTTAGTTAGTTTGATAGTTC 59.183 37.037 0.00 0.00 0.00 3.01
407 408 7.599998 GTCCCGTTTAGTTAGTTTGATAGTTCA 59.400 37.037 0.00 0.00 0.00 3.18
408 409 8.316214 TCCCGTTTAGTTAGTTTGATAGTTCAT 58.684 33.333 0.00 0.00 0.00 2.57
409 410 8.943002 CCCGTTTAGTTAGTTTGATAGTTCATT 58.057 33.333 0.00 0.00 0.00 2.57
479 480 5.949952 AGTGGATTTAAGCGGGATTTAAACT 59.050 36.000 0.00 0.00 34.04 2.66
481 482 5.712917 TGGATTTAAGCGGGATTTAAACTGT 59.287 36.000 0.00 0.00 34.04 3.55
497 505 5.743636 AAACTGTACCCGGTTTACATAGA 57.256 39.130 12.33 0.00 46.01 1.98
516 524 8.693120 ACATAGAATCTCAATTTCATGCATCT 57.307 30.769 0.00 0.00 0.00 2.90
530 538 8.523523 TTTCATGCATCTTGTCTTTATTTGTG 57.476 30.769 0.00 0.00 0.00 3.33
541 549 6.966021 TGTCTTTATTTGTGTGCTTTAGGAC 58.034 36.000 0.00 0.00 36.87 3.85
565 586 4.384056 AGGATGCTTATCAACAATCTCCG 58.616 43.478 0.00 0.00 0.00 4.63
579 600 5.497474 ACAATCTCCGTAATTTTACAGCCT 58.503 37.500 1.76 0.00 33.28 4.58
605 628 1.024271 CACGGGATTTCGGCATGAAT 58.976 50.000 0.00 0.00 36.22 2.57
620 643 2.363306 TGAATGTCAGGCAAACCAGT 57.637 45.000 0.00 0.00 39.06 4.00
794 817 2.288825 ACTCACATGTCCACACCTAACG 60.289 50.000 0.00 0.00 0.00 3.18
893 926 4.077184 CCACGTAGGCGCCCAAGA 62.077 66.667 26.15 2.71 42.83 3.02
918 951 2.765807 CTCCCGTGATCCCAGGCT 60.766 66.667 0.00 0.00 0.00 4.58
948 981 4.208686 GGGAGGAGGCTACGTGCG 62.209 72.222 0.00 0.00 44.05 5.34
949 982 3.138798 GGAGGAGGCTACGTGCGA 61.139 66.667 0.00 0.00 44.05 5.10
988 1021 0.392193 CCGTTGGATGAGCTGAGCTT 60.392 55.000 9.00 0.00 39.88 3.74
989 1022 1.446907 CGTTGGATGAGCTGAGCTTT 58.553 50.000 9.00 0.00 39.88 3.51
995 1028 0.323178 ATGAGCTGAGCTTTGGGTGG 60.323 55.000 9.00 0.00 39.88 4.61
1086 1125 4.694233 CTCCTGCTGGTGCTGCGT 62.694 66.667 9.73 0.00 40.48 5.24
1373 1412 3.188773 GTCGATCGACCACACACAA 57.811 52.632 33.06 0.00 39.08 3.33
1385 1424 4.700700 ACCACACACAAGGAGTTAGTTAC 58.299 43.478 0.00 0.00 0.00 2.50
1744 1784 1.482621 CGTGCGATGAACTGATCGGG 61.483 60.000 6.47 0.00 44.45 5.14
1849 1890 7.394641 TGATTAGCTCGACACTATTAGATGGAT 59.605 37.037 0.00 0.00 0.00 3.41
1850 1891 5.384063 AGCTCGACACTATTAGATGGATG 57.616 43.478 0.00 0.00 0.00 3.51
1948 1992 7.953005 TTCATTTTGGGTTTGCTATATCTGA 57.047 32.000 0.00 0.00 0.00 3.27
2002 2047 2.495669 TGGGGATTTTTGCCGAGAATTC 59.504 45.455 0.00 0.00 0.00 2.17
2015 2060 2.743183 CGAGAATTCGGGGAGCTTCATT 60.743 50.000 0.00 0.00 43.05 2.57
2016 2061 3.492656 CGAGAATTCGGGGAGCTTCATTA 60.493 47.826 0.00 0.00 43.05 1.90
2017 2062 3.809905 AGAATTCGGGGAGCTTCATTAC 58.190 45.455 0.00 0.00 0.00 1.89
2018 2063 3.456277 AGAATTCGGGGAGCTTCATTACT 59.544 43.478 0.00 0.00 0.00 2.24
2019 2064 3.933861 ATTCGGGGAGCTTCATTACTT 57.066 42.857 0.00 0.00 0.00 2.24
2024 2069 6.488769 TCGGGGAGCTTCATTACTTTAATA 57.511 37.500 0.00 0.00 0.00 0.98
2058 2103 3.914426 ACTACCCCTGAAGCTGTAATG 57.086 47.619 0.00 0.00 0.00 1.90
2075 2120 6.348540 GCTGTAATGAGAAAGGATGAACGTTT 60.349 38.462 0.46 0.00 38.93 3.60
2086 2131 0.678366 TGAACGTTTGTGTGGCCAGT 60.678 50.000 5.11 0.00 0.00 4.00
2088 2133 1.263217 GAACGTTTGTGTGGCCAGTAG 59.737 52.381 5.11 0.00 0.00 2.57
2089 2134 0.179468 ACGTTTGTGTGGCCAGTAGT 59.821 50.000 5.11 0.00 0.00 2.73
2091 2136 1.540363 CGTTTGTGTGGCCAGTAGTCT 60.540 52.381 5.11 0.00 0.00 3.24
2092 2137 1.873591 GTTTGTGTGGCCAGTAGTCTG 59.126 52.381 5.11 0.00 41.01 3.51
2094 2139 1.419381 TGTGTGGCCAGTAGTCTGAA 58.581 50.000 5.11 0.00 43.76 3.02
2095 2140 1.765904 TGTGTGGCCAGTAGTCTGAAA 59.234 47.619 5.11 0.00 43.76 2.69
2096 2141 2.143925 GTGTGGCCAGTAGTCTGAAAC 58.856 52.381 5.11 0.00 43.76 2.78
2105 2150 4.444306 CCAGTAGTCTGAAACCAAGGAACA 60.444 45.833 0.00 0.00 43.76 3.18
2128 2173 2.359214 GCCTGCTTAGCATAAAGTTCCC 59.641 50.000 7.58 0.00 38.13 3.97
2137 2182 1.818674 CATAAAGTTCCCCCACACTGC 59.181 52.381 0.00 0.00 0.00 4.40
2180 2225 7.971722 TGTCTAACAGAAAAACTAAAACTTGCC 59.028 33.333 0.00 0.00 0.00 4.52
2181 2226 8.188799 GTCTAACAGAAAAACTAAAACTTGCCT 58.811 33.333 0.00 0.00 0.00 4.75
2200 2245 7.503902 ACTTGCCTATTTTCCCTCTATTTCATC 59.496 37.037 0.00 0.00 0.00 2.92
2213 2258 7.122055 CCCTCTATTTCATCTAAGATAGACGCT 59.878 40.741 0.00 0.00 37.69 5.07
2246 2291 7.827819 TCAAGAATTATAACACGAAGACCAG 57.172 36.000 0.00 0.00 0.00 4.00
2256 2301 3.243771 ACACGAAGACCAGAGGTTAACAG 60.244 47.826 8.10 0.00 35.25 3.16
2275 2320 2.941720 CAGCCTCTAAGCAATCCACTTC 59.058 50.000 0.00 0.00 34.23 3.01
2288 2333 0.250295 CCACTTCCATCACCACGTGT 60.250 55.000 15.65 0.00 34.79 4.49
2317 2435 6.199937 AGCCTCATAGTTAGTGCAAAAATG 57.800 37.500 0.00 0.00 0.00 2.32
2319 2437 6.604795 AGCCTCATAGTTAGTGCAAAAATGAT 59.395 34.615 0.00 0.00 0.00 2.45
2327 2445 4.612264 AGTGCAAAAATGATGCCTTCTT 57.388 36.364 0.00 0.00 43.16 2.52
2328 2446 4.312443 AGTGCAAAAATGATGCCTTCTTG 58.688 39.130 0.00 0.00 43.16 3.02
2329 2447 3.434299 GTGCAAAAATGATGCCTTCTTGG 59.566 43.478 0.00 0.00 43.16 3.61
2339 2457 1.318158 GCCTTCTTGGAGTGCCATGG 61.318 60.000 7.63 7.63 45.46 3.66
2344 2462 0.245539 CTTGGAGTGCCATGGCTTTG 59.754 55.000 35.53 15.39 45.46 2.77
2354 2472 2.896168 CCATGGCTTTGGCAATAACTG 58.104 47.619 0.00 0.00 42.43 3.16
2357 2475 1.892474 TGGCTTTGGCAATAACTGGAC 59.108 47.619 0.00 0.00 40.87 4.02
2370 2488 0.772124 ACTGGACCAGTGACCCCATT 60.772 55.000 26.61 0.00 43.63 3.16
2392 2510 3.394606 TGAAGGGTTTACTCCAAGCTTCT 59.605 43.478 0.00 0.00 30.31 2.85
2393 2511 4.595781 TGAAGGGTTTACTCCAAGCTTCTA 59.404 41.667 0.00 0.00 30.31 2.10
2401 2519 4.479786 ACTCCAAGCTTCTATGAAGGAC 57.520 45.455 0.00 0.00 0.00 3.85
2423 2541 2.668550 GGGACCGAGTTGCACCAC 60.669 66.667 0.00 0.00 0.00 4.16
2430 2548 1.374758 GAGTTGCACCACCTCCTCG 60.375 63.158 0.00 0.00 0.00 4.63
2433 2551 2.879233 TTGCACCACCTCCTCGTCC 61.879 63.158 0.00 0.00 0.00 4.79
2466 2584 1.093972 TCAATGTTGATTGCGCCGAT 58.906 45.000 4.18 0.00 39.16 4.18
2471 2589 0.931662 GTTGATTGCGCCGATGATGC 60.932 55.000 4.18 0.00 0.00 3.91
2493 2611 8.618702 ATGCTGATTTTCTATCTAACATCTGG 57.381 34.615 0.00 0.00 0.00 3.86
2495 2613 7.930325 TGCTGATTTTCTATCTAACATCTGGAG 59.070 37.037 0.00 0.00 0.00 3.86
2496 2614 8.147058 GCTGATTTTCTATCTAACATCTGGAGA 58.853 37.037 0.00 0.00 0.00 3.71
2506 2624 1.278985 ACATCTGGAGATCGCCAACAA 59.721 47.619 19.39 8.32 37.52 2.83
2513 2631 1.599542 GAGATCGCCAACAATAGCCAC 59.400 52.381 0.00 0.00 0.00 5.01
2538 2656 0.899717 ATGCCGCATTGGGACTTTGT 60.900 50.000 0.00 0.00 43.03 2.83
2539 2657 1.080569 GCCGCATTGGGACTTTGTG 60.081 57.895 1.69 0.00 38.63 3.33
2540 2658 1.523154 GCCGCATTGGGACTTTGTGA 61.523 55.000 1.69 0.00 38.63 3.58
2541 2659 0.958091 CCGCATTGGGACTTTGTGAA 59.042 50.000 1.69 0.00 0.00 3.18
2542 2660 1.339610 CCGCATTGGGACTTTGTGAAA 59.660 47.619 1.69 0.00 0.00 2.69
2543 2661 2.607771 CCGCATTGGGACTTTGTGAAAG 60.608 50.000 1.69 0.00 44.10 2.62
2544 2662 2.407090 GCATTGGGACTTTGTGAAAGC 58.593 47.619 0.00 0.00 42.27 3.51
2545 2663 2.224018 GCATTGGGACTTTGTGAAAGCA 60.224 45.455 0.00 0.00 42.27 3.91
2546 2664 3.383761 CATTGGGACTTTGTGAAAGCAC 58.616 45.455 0.00 0.00 45.35 4.40
2561 2679 4.850193 CACAAATGCTCCCTGGGT 57.150 55.556 13.56 0.00 0.00 4.51
2562 2680 2.269978 CACAAATGCTCCCTGGGTG 58.730 57.895 13.56 11.90 0.00 4.61
2563 2681 0.251297 CACAAATGCTCCCTGGGTGA 60.251 55.000 18.68 4.42 0.00 4.02
2564 2682 0.706433 ACAAATGCTCCCTGGGTGAT 59.294 50.000 18.68 6.47 0.00 3.06
2565 2683 1.077663 ACAAATGCTCCCTGGGTGATT 59.922 47.619 18.68 11.55 0.00 2.57
2566 2684 2.181975 CAAATGCTCCCTGGGTGATTT 58.818 47.619 18.68 15.89 0.00 2.17
2567 2685 2.568509 CAAATGCTCCCTGGGTGATTTT 59.431 45.455 18.68 12.79 0.00 1.82
2568 2686 1.856629 ATGCTCCCTGGGTGATTTTG 58.143 50.000 18.68 0.65 0.00 2.44
2569 2687 0.251742 TGCTCCCTGGGTGATTTTGG 60.252 55.000 18.68 0.00 0.00 3.28
2570 2688 0.251787 GCTCCCTGGGTGATTTTGGT 60.252 55.000 18.68 0.00 0.00 3.67
2571 2689 1.005450 GCTCCCTGGGTGATTTTGGTA 59.995 52.381 18.68 0.00 0.00 3.25
2572 2690 2.556559 GCTCCCTGGGTGATTTTGGTAA 60.557 50.000 18.68 0.00 0.00 2.85
2573 2691 3.881713 GCTCCCTGGGTGATTTTGGTAAT 60.882 47.826 18.68 0.00 0.00 1.89
2574 2692 3.954258 CTCCCTGGGTGATTTTGGTAATC 59.046 47.826 13.56 0.00 0.00 1.75
2575 2693 3.335183 TCCCTGGGTGATTTTGGTAATCA 59.665 43.478 13.56 0.00 34.56 2.57
2576 2694 4.093011 CCCTGGGTGATTTTGGTAATCAA 58.907 43.478 3.97 0.00 38.27 2.57
2577 2695 4.716287 CCCTGGGTGATTTTGGTAATCAAT 59.284 41.667 3.97 0.00 38.27 2.57
2578 2696 5.395546 CCCTGGGTGATTTTGGTAATCAATG 60.396 44.000 3.97 0.00 38.27 2.82
2579 2697 5.421693 CCTGGGTGATTTTGGTAATCAATGA 59.578 40.000 2.06 0.00 38.27 2.57
2580 2698 6.279513 TGGGTGATTTTGGTAATCAATGAC 57.720 37.500 2.06 0.00 38.27 3.06
2581 2699 5.777223 TGGGTGATTTTGGTAATCAATGACA 59.223 36.000 2.06 0.00 38.27 3.58
2582 2700 6.268617 TGGGTGATTTTGGTAATCAATGACAA 59.731 34.615 2.06 0.00 38.27 3.18
2583 2701 6.589907 GGGTGATTTTGGTAATCAATGACAAC 59.410 38.462 2.06 0.00 38.27 3.32
2584 2702 7.151308 GGTGATTTTGGTAATCAATGACAACA 58.849 34.615 2.06 0.00 38.27 3.33
2585 2703 7.818930 GGTGATTTTGGTAATCAATGACAACAT 59.181 33.333 2.06 0.00 38.27 2.71
2586 2704 9.853555 GTGATTTTGGTAATCAATGACAACATA 57.146 29.630 2.06 0.00 38.27 2.29
2643 2761 7.678947 ACTTTAGATGAGTTCAACAATGGAG 57.321 36.000 0.00 0.00 0.00 3.86
2644 2762 7.227156 ACTTTAGATGAGTTCAACAATGGAGT 58.773 34.615 0.00 0.00 0.00 3.85
2645 2763 7.173907 ACTTTAGATGAGTTCAACAATGGAGTG 59.826 37.037 0.00 0.00 0.00 3.51
2646 2764 4.330250 AGATGAGTTCAACAATGGAGTGG 58.670 43.478 0.00 0.00 0.00 4.00
2647 2765 3.576078 TGAGTTCAACAATGGAGTGGT 57.424 42.857 0.00 0.00 0.00 4.16
2648 2766 4.698201 TGAGTTCAACAATGGAGTGGTA 57.302 40.909 0.00 0.00 0.00 3.25
2649 2767 5.042463 TGAGTTCAACAATGGAGTGGTAA 57.958 39.130 0.00 0.00 0.00 2.85
2650 2768 5.063204 TGAGTTCAACAATGGAGTGGTAAG 58.937 41.667 0.00 0.00 0.00 2.34
2651 2769 4.398319 AGTTCAACAATGGAGTGGTAAGG 58.602 43.478 0.00 0.00 0.00 2.69
2652 2770 4.104102 AGTTCAACAATGGAGTGGTAAGGA 59.896 41.667 0.00 0.00 0.00 3.36
2653 2771 4.015872 TCAACAATGGAGTGGTAAGGAC 57.984 45.455 0.00 0.00 0.00 3.85
2654 2772 3.392947 TCAACAATGGAGTGGTAAGGACA 59.607 43.478 0.00 0.00 0.00 4.02
2655 2773 4.141287 CAACAATGGAGTGGTAAGGACAA 58.859 43.478 0.00 0.00 0.00 3.18
2656 2774 4.021102 ACAATGGAGTGGTAAGGACAAG 57.979 45.455 0.00 0.00 0.00 3.16
2657 2775 3.650942 ACAATGGAGTGGTAAGGACAAGA 59.349 43.478 0.00 0.00 0.00 3.02
2658 2776 4.256920 CAATGGAGTGGTAAGGACAAGAG 58.743 47.826 0.00 0.00 0.00 2.85
2659 2777 2.257207 TGGAGTGGTAAGGACAAGAGG 58.743 52.381 0.00 0.00 0.00 3.69
2660 2778 2.158219 TGGAGTGGTAAGGACAAGAGGA 60.158 50.000 0.00 0.00 0.00 3.71
2661 2779 3.108376 GGAGTGGTAAGGACAAGAGGAT 58.892 50.000 0.00 0.00 0.00 3.24
2662 2780 3.118592 GGAGTGGTAAGGACAAGAGGATG 60.119 52.174 0.00 0.00 0.00 3.51
2663 2781 3.515901 GAGTGGTAAGGACAAGAGGATGT 59.484 47.826 0.00 0.00 35.90 3.06
2664 2782 3.261897 AGTGGTAAGGACAAGAGGATGTG 59.738 47.826 0.00 0.00 32.57 3.21
2665 2783 2.571653 TGGTAAGGACAAGAGGATGTGG 59.428 50.000 0.00 0.00 32.57 4.17
2666 2784 2.838202 GGTAAGGACAAGAGGATGTGGA 59.162 50.000 0.00 0.00 32.57 4.02
2667 2785 3.263425 GGTAAGGACAAGAGGATGTGGAA 59.737 47.826 0.00 0.00 32.57 3.53
2668 2786 3.425162 AAGGACAAGAGGATGTGGAAC 57.575 47.619 0.00 0.00 32.57 3.62
2669 2787 1.630878 AGGACAAGAGGATGTGGAACC 59.369 52.381 0.00 0.00 34.36 3.62
2670 2788 1.340114 GGACAAGAGGATGTGGAACCC 60.340 57.143 0.00 0.00 34.36 4.11
2671 2789 0.698818 ACAAGAGGATGTGGAACCCC 59.301 55.000 0.00 0.00 34.36 4.95
2672 2790 0.995024 CAAGAGGATGTGGAACCCCT 59.005 55.000 0.00 0.00 40.84 4.79
2673 2791 1.355720 CAAGAGGATGTGGAACCCCTT 59.644 52.381 0.00 0.00 38.71 3.95
2674 2792 1.290134 AGAGGATGTGGAACCCCTTC 58.710 55.000 0.00 0.00 38.71 3.46
2675 2793 0.991920 GAGGATGTGGAACCCCTTCA 59.008 55.000 0.00 0.00 38.71 3.02
2676 2794 1.354368 GAGGATGTGGAACCCCTTCAA 59.646 52.381 0.00 0.00 38.71 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.155975 CTCTTAATTGTTGCTGAGTTAGTACAT 57.844 33.333 0.00 0.00 0.00 2.29
20 21 7.602644 CCTCTTAATTGTTGCTGAGTTAGTACA 59.397 37.037 0.00 0.00 0.00 2.90
21 22 7.064728 CCCTCTTAATTGTTGCTGAGTTAGTAC 59.935 40.741 0.00 0.00 0.00 2.73
22 23 7.103641 CCCTCTTAATTGTTGCTGAGTTAGTA 58.896 38.462 0.00 0.00 0.00 1.82
23 24 5.940470 CCCTCTTAATTGTTGCTGAGTTAGT 59.060 40.000 0.00 0.00 0.00 2.24
24 25 5.940470 ACCCTCTTAATTGTTGCTGAGTTAG 59.060 40.000 0.00 0.00 0.00 2.34
25 26 5.705441 CACCCTCTTAATTGTTGCTGAGTTA 59.295 40.000 0.00 0.00 0.00 2.24
26 27 4.520492 CACCCTCTTAATTGTTGCTGAGTT 59.480 41.667 0.00 0.00 0.00 3.01
27 28 4.074970 CACCCTCTTAATTGTTGCTGAGT 58.925 43.478 0.00 0.00 0.00 3.41
28 29 4.074970 ACACCCTCTTAATTGTTGCTGAG 58.925 43.478 0.00 0.00 0.00 3.35
29 30 4.098914 ACACCCTCTTAATTGTTGCTGA 57.901 40.909 0.00 0.00 0.00 4.26
30 31 4.853924 AACACCCTCTTAATTGTTGCTG 57.146 40.909 0.00 0.00 30.99 4.41
31 32 4.649218 ACAAACACCCTCTTAATTGTTGCT 59.351 37.500 0.00 0.00 32.54 3.91
32 33 4.944048 ACAAACACCCTCTTAATTGTTGC 58.056 39.130 0.00 0.00 32.54 4.17
33 34 6.478673 GGAAACAAACACCCTCTTAATTGTTG 59.521 38.462 2.84 0.00 39.94 3.33
34 35 6.155393 TGGAAACAAACACCCTCTTAATTGTT 59.845 34.615 0.00 0.00 41.30 2.83
35 36 5.659079 TGGAAACAAACACCCTCTTAATTGT 59.341 36.000 0.00 0.00 37.44 2.71
36 37 6.155475 TGGAAACAAACACCCTCTTAATTG 57.845 37.500 0.00 0.00 37.44 2.32
37 38 5.304357 CCTGGAAACAAACACCCTCTTAATT 59.696 40.000 0.00 0.00 42.06 1.40
38 39 4.832823 CCTGGAAACAAACACCCTCTTAAT 59.167 41.667 0.00 0.00 42.06 1.40
39 40 4.211920 CCTGGAAACAAACACCCTCTTAA 58.788 43.478 0.00 0.00 42.06 1.85
40 41 3.435890 CCCTGGAAACAAACACCCTCTTA 60.436 47.826 0.00 0.00 42.06 2.10
41 42 2.666317 CCTGGAAACAAACACCCTCTT 58.334 47.619 0.00 0.00 42.06 2.85
42 43 1.133482 CCCTGGAAACAAACACCCTCT 60.133 52.381 0.00 0.00 42.06 3.69
43 44 1.133606 TCCCTGGAAACAAACACCCTC 60.134 52.381 0.00 0.00 42.06 4.30
44 45 0.930726 TCCCTGGAAACAAACACCCT 59.069 50.000 0.00 0.00 42.06 4.34
45 46 1.037493 GTCCCTGGAAACAAACACCC 58.963 55.000 0.00 0.00 42.06 4.61
46 47 2.067365 AGTCCCTGGAAACAAACACC 57.933 50.000 0.00 0.00 42.06 4.16
47 48 5.508994 CCAATAAGTCCCTGGAAACAAACAC 60.509 44.000 0.00 0.00 42.06 3.32
48 49 4.586841 CCAATAAGTCCCTGGAAACAAACA 59.413 41.667 0.00 0.00 42.06 2.83
49 50 4.560716 GCCAATAAGTCCCTGGAAACAAAC 60.561 45.833 0.00 0.00 42.06 2.93
50 51 3.576550 GCCAATAAGTCCCTGGAAACAAA 59.423 43.478 0.00 0.00 42.06 2.83
51 52 3.161866 GCCAATAAGTCCCTGGAAACAA 58.838 45.455 0.00 0.00 42.06 2.83
52 53 2.378547 AGCCAATAAGTCCCTGGAAACA 59.621 45.455 0.00 0.00 39.59 2.83
53 54 3.087370 AGCCAATAAGTCCCTGGAAAC 57.913 47.619 0.00 0.00 31.38 2.78
54 55 3.825908 AAGCCAATAAGTCCCTGGAAA 57.174 42.857 0.00 0.00 31.38 3.13
55 56 3.202151 CCTAAGCCAATAAGTCCCTGGAA 59.798 47.826 0.00 0.00 31.38 3.53
56 57 2.777692 CCTAAGCCAATAAGTCCCTGGA 59.222 50.000 0.00 0.00 31.38 3.86
57 58 2.158608 CCCTAAGCCAATAAGTCCCTGG 60.159 54.545 0.00 0.00 0.00 4.45
58 59 2.777692 TCCCTAAGCCAATAAGTCCCTG 59.222 50.000 0.00 0.00 0.00 4.45
59 60 2.778270 GTCCCTAAGCCAATAAGTCCCT 59.222 50.000 0.00 0.00 0.00 4.20
60 61 2.778270 AGTCCCTAAGCCAATAAGTCCC 59.222 50.000 0.00 0.00 0.00 4.46
61 62 4.505324 AAGTCCCTAAGCCAATAAGTCC 57.495 45.455 0.00 0.00 0.00 3.85
62 63 7.933215 TTTTAAGTCCCTAAGCCAATAAGTC 57.067 36.000 0.00 0.00 0.00 3.01
87 88 9.225682 TGGTTTAGATGGGACTTATAGAGATTT 57.774 33.333 0.00 0.00 0.00 2.17
88 89 8.798975 TGGTTTAGATGGGACTTATAGAGATT 57.201 34.615 0.00 0.00 0.00 2.40
89 90 8.798975 TTGGTTTAGATGGGACTTATAGAGAT 57.201 34.615 0.00 0.00 0.00 2.75
90 91 8.483758 GTTTGGTTTAGATGGGACTTATAGAGA 58.516 37.037 0.00 0.00 0.00 3.10
91 92 8.265055 TGTTTGGTTTAGATGGGACTTATAGAG 58.735 37.037 0.00 0.00 0.00 2.43
92 93 8.153221 TGTTTGGTTTAGATGGGACTTATAGA 57.847 34.615 0.00 0.00 0.00 1.98
93 94 8.265055 TCTGTTTGGTTTAGATGGGACTTATAG 58.735 37.037 0.00 0.00 0.00 1.31
94 95 8.153221 TCTGTTTGGTTTAGATGGGACTTATA 57.847 34.615 0.00 0.00 0.00 0.98
95 96 7.027874 TCTGTTTGGTTTAGATGGGACTTAT 57.972 36.000 0.00 0.00 0.00 1.73
96 97 6.442541 TCTGTTTGGTTTAGATGGGACTTA 57.557 37.500 0.00 0.00 0.00 2.24
97 98 5.319043 TCTGTTTGGTTTAGATGGGACTT 57.681 39.130 0.00 0.00 0.00 3.01
98 99 4.993705 TCTGTTTGGTTTAGATGGGACT 57.006 40.909 0.00 0.00 0.00 3.85
99 100 4.459337 CCTTCTGTTTGGTTTAGATGGGAC 59.541 45.833 0.00 0.00 34.09 4.46
100 101 4.352595 TCCTTCTGTTTGGTTTAGATGGGA 59.647 41.667 0.00 0.00 36.76 4.37
101 102 4.459337 GTCCTTCTGTTTGGTTTAGATGGG 59.541 45.833 0.00 0.00 36.76 4.00
102 103 5.316987 AGTCCTTCTGTTTGGTTTAGATGG 58.683 41.667 0.00 0.00 37.20 3.51
103 104 6.884280 AAGTCCTTCTGTTTGGTTTAGATG 57.116 37.500 0.00 0.00 0.00 2.90
104 105 9.892130 CTATAAGTCCTTCTGTTTGGTTTAGAT 57.108 33.333 0.00 0.00 0.00 1.98
105 106 8.319146 CCTATAAGTCCTTCTGTTTGGTTTAGA 58.681 37.037 0.00 0.00 0.00 2.10
106 107 7.553044 CCCTATAAGTCCTTCTGTTTGGTTTAG 59.447 40.741 0.00 0.00 0.00 1.85
107 108 7.238096 TCCCTATAAGTCCTTCTGTTTGGTTTA 59.762 37.037 0.00 0.00 0.00 2.01
108 109 6.045106 TCCCTATAAGTCCTTCTGTTTGGTTT 59.955 38.462 0.00 0.00 0.00 3.27
109 110 5.550403 TCCCTATAAGTCCTTCTGTTTGGTT 59.450 40.000 0.00 0.00 0.00 3.67
110 111 5.045797 GTCCCTATAAGTCCTTCTGTTTGGT 60.046 44.000 0.00 0.00 0.00 3.67
111 112 5.189934 AGTCCCTATAAGTCCTTCTGTTTGG 59.810 44.000 0.00 0.00 0.00 3.28
112 113 6.301169 AGTCCCTATAAGTCCTTCTGTTTG 57.699 41.667 0.00 0.00 0.00 2.93
113 114 6.954352 AAGTCCCTATAAGTCCTTCTGTTT 57.046 37.500 0.00 0.00 0.00 2.83
114 115 8.445361 TTTAAGTCCCTATAAGTCCTTCTGTT 57.555 34.615 0.00 0.00 0.00 3.16
115 116 7.679025 ACTTTAAGTCCCTATAAGTCCTTCTGT 59.321 37.037 0.00 0.00 0.00 3.41
116 117 7.982354 CACTTTAAGTCCCTATAAGTCCTTCTG 59.018 40.741 0.00 0.00 0.00 3.02
117 118 7.125963 CCACTTTAAGTCCCTATAAGTCCTTCT 59.874 40.741 0.00 0.00 0.00 2.85
118 119 7.273712 CCACTTTAAGTCCCTATAAGTCCTTC 58.726 42.308 0.00 0.00 0.00 3.46
119 120 6.158169 CCCACTTTAAGTCCCTATAAGTCCTT 59.842 42.308 0.00 0.00 0.00 3.36
120 121 5.666265 CCCACTTTAAGTCCCTATAAGTCCT 59.334 44.000 0.00 0.00 0.00 3.85
121 122 5.686913 GCCCACTTTAAGTCCCTATAAGTCC 60.687 48.000 0.00 0.00 0.00 3.85
122 123 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
123 124 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
124 125 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
125 126 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
126 127 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
127 128 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
128 129 4.340617 CAAATGCCCACTTTAAGTCCCTA 58.659 43.478 0.00 0.00 0.00 3.53
129 130 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
130 131 2.233676 CCAAATGCCCACTTTAAGTCCC 59.766 50.000 0.00 0.00 0.00 4.46
131 132 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
132 133 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
133 134 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
134 135 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
135 136 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
136 137 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
137 138 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
138 139 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
139 140 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
140 141 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
141 142 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
142 143 6.323739 TCTTATTTCATAAGTCCCAAATGCCC 59.676 38.462 3.93 0.00 42.21 5.36
143 144 7.068716 AGTCTTATTTCATAAGTCCCAAATGCC 59.931 37.037 3.93 0.00 42.21 4.40
144 145 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
145 146 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
146 147 9.620259 GAGAGTCTTATTTCATAAGTCCCAAAT 57.380 33.333 0.00 0.00 42.21 2.32
147 148 8.602424 TGAGAGTCTTATTTCATAAGTCCCAAA 58.398 33.333 0.00 0.00 42.21 3.28
148 149 8.146053 TGAGAGTCTTATTTCATAAGTCCCAA 57.854 34.615 0.00 0.00 42.21 4.12
149 150 7.733773 TGAGAGTCTTATTTCATAAGTCCCA 57.266 36.000 0.00 0.00 42.21 4.37
150 151 7.713073 CCTTGAGAGTCTTATTTCATAAGTCCC 59.287 40.741 0.00 0.00 42.21 4.46
151 152 8.478877 TCCTTGAGAGTCTTATTTCATAAGTCC 58.521 37.037 0.00 0.00 42.21 3.85
152 153 9.528018 CTCCTTGAGAGTCTTATTTCATAAGTC 57.472 37.037 0.00 0.00 37.60 3.01
153 154 8.482128 CCTCCTTGAGAGTCTTATTTCATAAGT 58.518 37.037 0.00 0.00 41.47 2.24
154 155 7.930865 CCCTCCTTGAGAGTCTTATTTCATAAG 59.069 40.741 0.00 0.00 41.47 1.73
155 156 7.623677 TCCCTCCTTGAGAGTCTTATTTCATAA 59.376 37.037 0.00 0.00 41.47 1.90
156 157 7.132805 TCCCTCCTTGAGAGTCTTATTTCATA 58.867 38.462 0.00 0.00 41.47 2.15
157 158 5.966935 TCCCTCCTTGAGAGTCTTATTTCAT 59.033 40.000 0.00 0.00 41.47 2.57
158 159 5.342017 TCCCTCCTTGAGAGTCTTATTTCA 58.658 41.667 0.00 0.00 41.47 2.69
159 160 5.941555 TCCCTCCTTGAGAGTCTTATTTC 57.058 43.478 0.00 0.00 41.47 2.17
160 161 6.899892 AATCCCTCCTTGAGAGTCTTATTT 57.100 37.500 0.00 0.00 41.47 1.40
161 162 6.899892 AAATCCCTCCTTGAGAGTCTTATT 57.100 37.500 0.00 0.00 41.47 1.40
162 163 9.320295 CTATAAATCCCTCCTTGAGAGTCTTAT 57.680 37.037 0.00 0.00 41.47 1.73
163 164 7.730784 CCTATAAATCCCTCCTTGAGAGTCTTA 59.269 40.741 0.00 0.00 41.47 2.10
164 165 6.556874 CCTATAAATCCCTCCTTGAGAGTCTT 59.443 42.308 0.00 0.00 41.47 3.01
165 166 6.081356 CCTATAAATCCCTCCTTGAGAGTCT 58.919 44.000 0.00 0.00 41.47 3.24
166 167 5.247337 CCCTATAAATCCCTCCTTGAGAGTC 59.753 48.000 0.00 0.00 41.47 3.36
167 168 5.102609 TCCCTATAAATCCCTCCTTGAGAGT 60.103 44.000 0.00 0.00 41.47 3.24
168 169 5.247337 GTCCCTATAAATCCCTCCTTGAGAG 59.753 48.000 0.00 0.00 42.83 3.20
169 170 5.102609 AGTCCCTATAAATCCCTCCTTGAGA 60.103 44.000 0.00 0.00 0.00 3.27
170 171 5.158889 AGTCCCTATAAATCCCTCCTTGAG 58.841 45.833 0.00 0.00 0.00 3.02
171 172 5.171541 AGTCCCTATAAATCCCTCCTTGA 57.828 43.478 0.00 0.00 0.00 3.02
172 173 5.913946 AAGTCCCTATAAATCCCTCCTTG 57.086 43.478 0.00 0.00 0.00 3.61
173 174 9.875725 AATATAAGTCCCTATAAATCCCTCCTT 57.124 33.333 0.00 0.00 0.00 3.36
174 175 9.875725 AAATATAAGTCCCTATAAATCCCTCCT 57.124 33.333 0.00 0.00 0.00 3.69
175 176 9.907229 CAAATATAAGTCCCTATAAATCCCTCC 57.093 37.037 0.00 0.00 0.00 4.30
206 207 9.544579 GGTACTTATAAGTCCCTATAAGACCAT 57.455 37.037 21.25 0.00 41.46 3.55
207 208 8.513658 TGGTACTTATAAGTCCCTATAAGACCA 58.486 37.037 23.30 21.47 41.46 4.02
208 209 8.946797 TGGTACTTATAAGTCCCTATAAGACC 57.053 38.462 23.30 19.64 41.46 3.85
213 214 9.372189 GGTTCTTGGTACTTATAAGTCCCTATA 57.628 37.037 23.30 9.82 40.37 1.31
214 215 7.847848 TGGTTCTTGGTACTTATAAGTCCCTAT 59.152 37.037 23.30 3.08 40.37 2.57
215 216 7.191210 TGGTTCTTGGTACTTATAAGTCCCTA 58.809 38.462 23.30 16.84 40.37 3.53
216 217 6.027482 TGGTTCTTGGTACTTATAAGTCCCT 58.973 40.000 23.30 4.06 40.37 4.20
217 218 6.303903 TGGTTCTTGGTACTTATAAGTCCC 57.696 41.667 21.25 19.48 40.37 4.46
218 219 7.662669 TGTTTGGTTCTTGGTACTTATAAGTCC 59.337 37.037 21.25 20.04 40.37 3.85
219 220 8.611654 TGTTTGGTTCTTGGTACTTATAAGTC 57.388 34.615 21.25 12.66 40.37 3.01
220 221 7.664318 CCTGTTTGGTTCTTGGTACTTATAAGT 59.336 37.037 21.35 21.35 42.91 2.24
221 222 8.040716 CCTGTTTGGTTCTTGGTACTTATAAG 57.959 38.462 11.05 11.05 0.00 1.73
222 223 7.989416 CCTGTTTGGTTCTTGGTACTTATAA 57.011 36.000 0.00 0.00 0.00 0.98
238 239 6.069847 TCCTTATAAAGTCCCTACCTGTTTGG 60.070 42.308 0.00 0.00 42.93 3.28
239 240 6.822170 GTCCTTATAAAGTCCCTACCTGTTTG 59.178 42.308 0.00 0.00 0.00 2.93
240 241 6.734281 AGTCCTTATAAAGTCCCTACCTGTTT 59.266 38.462 0.00 0.00 0.00 2.83
241 242 6.269974 AGTCCTTATAAAGTCCCTACCTGTT 58.730 40.000 0.00 0.00 0.00 3.16
242 243 5.851418 AGTCCTTATAAAGTCCCTACCTGT 58.149 41.667 0.00 0.00 0.00 4.00
243 244 6.408206 CCAAGTCCTTATAAAGTCCCTACCTG 60.408 46.154 0.00 0.00 0.00 4.00
244 245 5.666265 CCAAGTCCTTATAAAGTCCCTACCT 59.334 44.000 0.00 0.00 0.00 3.08
245 246 5.163227 CCCAAGTCCTTATAAAGTCCCTACC 60.163 48.000 0.00 0.00 0.00 3.18
246 247 5.664457 TCCCAAGTCCTTATAAAGTCCCTAC 59.336 44.000 0.00 0.00 0.00 3.18
247 248 5.664457 GTCCCAAGTCCTTATAAAGTCCCTA 59.336 44.000 0.00 0.00 0.00 3.53
248 249 4.473922 GTCCCAAGTCCTTATAAAGTCCCT 59.526 45.833 0.00 0.00 0.00 4.20
249 250 4.473922 AGTCCCAAGTCCTTATAAAGTCCC 59.526 45.833 0.00 0.00 0.00 4.46
250 251 5.695424 AGTCCCAAGTCCTTATAAAGTCC 57.305 43.478 0.00 0.00 0.00 3.85
256 257 8.711170 CCAACTTATAAGTCCCAAGTCCTTATA 58.289 37.037 18.28 0.00 38.57 0.98
257 258 7.366551 CCCAACTTATAAGTCCCAAGTCCTTAT 60.367 40.741 18.28 0.00 38.57 1.73
258 259 6.069847 CCCAACTTATAAGTCCCAAGTCCTTA 60.070 42.308 18.28 0.00 38.57 2.69
259 260 5.281037 CCCAACTTATAAGTCCCAAGTCCTT 60.281 44.000 18.28 0.00 38.57 3.36
260 261 4.227527 CCCAACTTATAAGTCCCAAGTCCT 59.772 45.833 18.28 0.00 38.57 3.85
261 262 4.226620 TCCCAACTTATAAGTCCCAAGTCC 59.773 45.833 18.28 0.00 38.57 3.85
262 263 5.045797 AGTCCCAACTTATAAGTCCCAAGTC 60.046 44.000 18.28 6.78 38.57 3.01
263 264 4.850386 AGTCCCAACTTATAAGTCCCAAGT 59.150 41.667 18.28 5.74 38.57 3.16
264 265 5.437191 AGTCCCAACTTATAAGTCCCAAG 57.563 43.478 18.28 6.66 38.57 3.61
265 266 6.956102 TTAGTCCCAACTTATAAGTCCCAA 57.044 37.500 18.28 3.05 38.57 4.12
266 267 6.956102 TTTAGTCCCAACTTATAAGTCCCA 57.044 37.500 18.28 1.06 38.57 4.37
294 295 6.371825 CCTGTTTGGTTCATAAGTCTTAGGAC 59.628 42.308 6.47 0.00 42.41 3.85
295 296 6.472887 CCTGTTTGGTTCATAAGTCTTAGGA 58.527 40.000 2.85 2.85 0.00 2.94
296 297 5.648092 CCCTGTTTGGTTCATAAGTCTTAGG 59.352 44.000 0.00 0.00 0.00 2.69
297 298 5.123979 GCCCTGTTTGGTTCATAAGTCTTAG 59.876 44.000 0.00 0.00 0.00 2.18
298 299 5.007682 GCCCTGTTTGGTTCATAAGTCTTA 58.992 41.667 0.00 0.00 0.00 2.10
299 300 3.826729 GCCCTGTTTGGTTCATAAGTCTT 59.173 43.478 0.00 0.00 0.00 3.01
300 301 3.421844 GCCCTGTTTGGTTCATAAGTCT 58.578 45.455 0.00 0.00 0.00 3.24
301 302 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
302 303 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
303 304 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
304 305 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
305 306 4.601406 ATTAGGCCCTGTTTGGTTCATA 57.399 40.909 0.00 0.00 0.00 2.15
306 307 2.990740 TTAGGCCCTGTTTGGTTCAT 57.009 45.000 0.00 0.00 0.00 2.57
307 308 2.990740 ATTAGGCCCTGTTTGGTTCA 57.009 45.000 0.00 0.00 0.00 3.18
308 309 4.532834 TCATATTAGGCCCTGTTTGGTTC 58.467 43.478 0.00 0.00 0.00 3.62
309 310 4.601406 TCATATTAGGCCCTGTTTGGTT 57.399 40.909 0.00 0.00 0.00 3.67
310 311 4.601406 TTCATATTAGGCCCTGTTTGGT 57.399 40.909 0.00 0.00 0.00 3.67
311 312 6.127083 ACAAATTCATATTAGGCCCTGTTTGG 60.127 38.462 0.00 0.00 0.00 3.28
312 313 6.757947 CACAAATTCATATTAGGCCCTGTTTG 59.242 38.462 0.00 1.34 0.00 2.93
313 314 6.127083 CCACAAATTCATATTAGGCCCTGTTT 60.127 38.462 0.00 0.00 0.00 2.83
314 315 5.363580 CCACAAATTCATATTAGGCCCTGTT 59.636 40.000 0.00 0.00 0.00 3.16
315 316 4.895297 CCACAAATTCATATTAGGCCCTGT 59.105 41.667 0.00 0.00 0.00 4.00
316 317 5.139727 TCCACAAATTCATATTAGGCCCTG 58.860 41.667 0.00 0.00 0.00 4.45
317 318 5.402054 TCCACAAATTCATATTAGGCCCT 57.598 39.130 0.00 0.00 0.00 5.19
318 319 5.598417 ACTTCCACAAATTCATATTAGGCCC 59.402 40.000 0.00 0.00 0.00 5.80
319 320 6.715347 ACTTCCACAAATTCATATTAGGCC 57.285 37.500 0.00 0.00 0.00 5.19
320 321 9.289782 AGATACTTCCACAAATTCATATTAGGC 57.710 33.333 0.00 0.00 0.00 3.93
324 325 9.799106 CCCTAGATACTTCCACAAATTCATATT 57.201 33.333 0.00 0.00 0.00 1.28
325 326 9.170890 TCCCTAGATACTTCCACAAATTCATAT 57.829 33.333 0.00 0.00 0.00 1.78
326 327 8.561536 TCCCTAGATACTTCCACAAATTCATA 57.438 34.615 0.00 0.00 0.00 2.15
327 328 7.451731 TCCCTAGATACTTCCACAAATTCAT 57.548 36.000 0.00 0.00 0.00 2.57
328 329 6.884472 TCCCTAGATACTTCCACAAATTCA 57.116 37.500 0.00 0.00 0.00 2.57
329 330 7.283329 ACATCCCTAGATACTTCCACAAATTC 58.717 38.462 0.00 0.00 0.00 2.17
330 331 7.213178 ACATCCCTAGATACTTCCACAAATT 57.787 36.000 0.00 0.00 0.00 1.82
331 332 6.831664 ACATCCCTAGATACTTCCACAAAT 57.168 37.500 0.00 0.00 0.00 2.32
332 333 7.743116 TTACATCCCTAGATACTTCCACAAA 57.257 36.000 0.00 0.00 0.00 2.83
333 334 7.743116 TTTACATCCCTAGATACTTCCACAA 57.257 36.000 0.00 0.00 0.00 3.33
334 335 7.202093 CCATTTACATCCCTAGATACTTCCACA 60.202 40.741 0.00 0.00 0.00 4.17
335 336 7.162082 CCATTTACATCCCTAGATACTTCCAC 58.838 42.308 0.00 0.00 0.00 4.02
336 337 6.239887 GCCATTTACATCCCTAGATACTTCCA 60.240 42.308 0.00 0.00 0.00 3.53
337 338 6.174049 GCCATTTACATCCCTAGATACTTCC 58.826 44.000 0.00 0.00 0.00 3.46
338 339 6.769512 TGCCATTTACATCCCTAGATACTTC 58.230 40.000 0.00 0.00 0.00 3.01
339 340 6.763715 TGCCATTTACATCCCTAGATACTT 57.236 37.500 0.00 0.00 0.00 2.24
340 341 6.763715 TTGCCATTTACATCCCTAGATACT 57.236 37.500 0.00 0.00 0.00 2.12
341 342 9.515226 TTATTTGCCATTTACATCCCTAGATAC 57.485 33.333 0.00 0.00 0.00 2.24
343 344 9.605951 ATTTATTTGCCATTTACATCCCTAGAT 57.394 29.630 0.00 0.00 0.00 1.98
344 345 8.859090 CATTTATTTGCCATTTACATCCCTAGA 58.141 33.333 0.00 0.00 0.00 2.43
345 346 8.859090 TCATTTATTTGCCATTTACATCCCTAG 58.141 33.333 0.00 0.00 0.00 3.02
346 347 8.637986 GTCATTTATTTGCCATTTACATCCCTA 58.362 33.333 0.00 0.00 0.00 3.53
347 348 7.125507 TGTCATTTATTTGCCATTTACATCCCT 59.874 33.333 0.00 0.00 0.00 4.20
348 349 7.224557 GTGTCATTTATTTGCCATTTACATCCC 59.775 37.037 0.00 0.00 0.00 3.85
349 350 7.224557 GGTGTCATTTATTTGCCATTTACATCC 59.775 37.037 0.00 0.00 0.00 3.51
350 351 7.224557 GGGTGTCATTTATTTGCCATTTACATC 59.775 37.037 0.00 0.00 0.00 3.06
351 352 7.047271 GGGTGTCATTTATTTGCCATTTACAT 58.953 34.615 0.00 0.00 0.00 2.29
352 353 6.402222 GGGTGTCATTTATTTGCCATTTACA 58.598 36.000 0.00 0.00 0.00 2.41
353 354 5.518487 CGGGTGTCATTTATTTGCCATTTAC 59.482 40.000 0.00 0.00 0.00 2.01
354 355 5.419155 TCGGGTGTCATTTATTTGCCATTTA 59.581 36.000 0.00 0.00 0.00 1.40
355 356 4.221703 TCGGGTGTCATTTATTTGCCATTT 59.778 37.500 0.00 0.00 0.00 2.32
356 357 3.766591 TCGGGTGTCATTTATTTGCCATT 59.233 39.130 0.00 0.00 0.00 3.16
357 358 3.360867 TCGGGTGTCATTTATTTGCCAT 58.639 40.909 0.00 0.00 0.00 4.40
358 359 2.796557 TCGGGTGTCATTTATTTGCCA 58.203 42.857 0.00 0.00 0.00 4.92
359 360 3.859411 TTCGGGTGTCATTTATTTGCC 57.141 42.857 0.00 0.00 0.00 4.52
360 361 4.805219 ACTTTCGGGTGTCATTTATTTGC 58.195 39.130 0.00 0.00 0.00 3.68
361 362 5.399013 GGACTTTCGGGTGTCATTTATTTG 58.601 41.667 0.00 0.00 35.11 2.32
362 363 4.461431 GGGACTTTCGGGTGTCATTTATTT 59.539 41.667 0.00 0.00 35.11 1.40
363 364 4.014406 GGGACTTTCGGGTGTCATTTATT 58.986 43.478 0.00 0.00 35.11 1.40
364 365 3.617284 GGGACTTTCGGGTGTCATTTAT 58.383 45.455 0.00 0.00 35.11 1.40
365 366 2.613474 CGGGACTTTCGGGTGTCATTTA 60.613 50.000 0.00 0.00 35.11 1.40
366 367 1.880646 CGGGACTTTCGGGTGTCATTT 60.881 52.381 0.00 0.00 35.11 2.32
367 368 0.321298 CGGGACTTTCGGGTGTCATT 60.321 55.000 0.00 0.00 35.11 2.57
368 369 1.295423 CGGGACTTTCGGGTGTCAT 59.705 57.895 0.00 0.00 35.11 3.06
369 370 1.688269 AACGGGACTTTCGGGTGTCA 61.688 55.000 0.00 0.00 35.11 3.58
370 371 0.533531 AAACGGGACTTTCGGGTGTC 60.534 55.000 0.00 0.00 0.00 3.67
371 372 0.758123 TAAACGGGACTTTCGGGTGT 59.242 50.000 0.00 0.00 0.00 4.16
372 373 1.270465 ACTAAACGGGACTTTCGGGTG 60.270 52.381 0.00 0.00 0.00 4.61
373 374 1.051008 ACTAAACGGGACTTTCGGGT 58.949 50.000 0.00 0.00 0.00 5.28
374 375 2.174363 AACTAAACGGGACTTTCGGG 57.826 50.000 0.00 0.00 0.00 5.14
375 376 3.917988 ACTAACTAAACGGGACTTTCGG 58.082 45.455 0.00 0.00 0.00 4.30
376 377 5.463061 TCAAACTAACTAAACGGGACTTTCG 59.537 40.000 0.00 0.00 0.00 3.46
377 378 6.849588 TCAAACTAACTAAACGGGACTTTC 57.150 37.500 0.00 0.00 0.00 2.62
378 379 8.152898 ACTATCAAACTAACTAAACGGGACTTT 58.847 33.333 0.00 0.00 0.00 2.66
379 380 7.674120 ACTATCAAACTAACTAAACGGGACTT 58.326 34.615 0.00 0.00 0.00 3.01
380 381 7.237209 ACTATCAAACTAACTAAACGGGACT 57.763 36.000 0.00 0.00 0.00 3.85
381 382 7.599998 TGAACTATCAAACTAACTAAACGGGAC 59.400 37.037 0.00 0.00 30.99 4.46
382 383 7.669427 TGAACTATCAAACTAACTAAACGGGA 58.331 34.615 0.00 0.00 30.99 5.14
383 384 7.894376 TGAACTATCAAACTAACTAAACGGG 57.106 36.000 0.00 0.00 30.99 5.28
450 451 9.629878 TTAAATCCCGCTTAAATCCACTTATTA 57.370 29.630 0.00 0.00 0.00 0.98
459 460 7.191551 GGTACAGTTTAAATCCCGCTTAAATC 58.808 38.462 0.00 0.00 32.45 2.17
460 461 6.095860 GGGTACAGTTTAAATCCCGCTTAAAT 59.904 38.462 0.00 0.00 32.45 1.40
461 462 5.415389 GGGTACAGTTTAAATCCCGCTTAAA 59.585 40.000 0.00 0.00 0.00 1.52
479 480 5.657745 TGAGATTCTATGTAAACCGGGTACA 59.342 40.000 19.10 19.10 35.98 2.90
481 482 6.795144 TTGAGATTCTATGTAAACCGGGTA 57.205 37.500 6.32 0.00 0.00 3.69
497 505 7.406031 AGACAAGATGCATGAAATTGAGATT 57.594 32.000 2.46 0.00 0.00 2.40
514 522 7.500892 TCCTAAAGCACACAAATAAAGACAAGA 59.499 33.333 0.00 0.00 0.00 3.02
515 523 7.591426 GTCCTAAAGCACACAAATAAAGACAAG 59.409 37.037 0.00 0.00 0.00 3.16
516 524 7.067615 TGTCCTAAAGCACACAAATAAAGACAA 59.932 33.333 0.00 0.00 0.00 3.18
530 538 2.716217 AGCATCCTTGTCCTAAAGCAC 58.284 47.619 0.00 0.00 0.00 4.40
541 549 5.277683 CGGAGATTGTTGATAAGCATCCTTG 60.278 44.000 0.00 0.00 32.47 3.61
543 551 4.141620 ACGGAGATTGTTGATAAGCATCCT 60.142 41.667 0.00 0.00 0.00 3.24
544 552 4.130118 ACGGAGATTGTTGATAAGCATCC 58.870 43.478 0.00 0.00 0.00 3.51
546 554 7.807977 AATTACGGAGATTGTTGATAAGCAT 57.192 32.000 0.00 0.00 0.00 3.79
565 586 7.486870 CCCGTGAAATTTAGGCTGTAAAATTAC 59.513 37.037 6.84 3.11 34.93 1.89
579 600 3.082548 TGCCGAAATCCCGTGAAATTTA 58.917 40.909 0.00 0.00 0.00 1.40
605 628 0.107410 ACGAACTGGTTTGCCTGACA 60.107 50.000 0.00 0.00 37.43 3.58
620 643 5.529430 TCTTCACTTTCCATAGCAAAACGAA 59.471 36.000 0.00 0.00 0.00 3.85
889 922 2.344203 ACGGGAGAGGCGAGTCTTG 61.344 63.158 0.00 0.00 0.00 3.02
893 926 2.043852 ATCACGGGAGAGGCGAGT 60.044 61.111 0.00 0.00 0.00 4.18
918 951 2.317040 CTCCTCCCGGCTTTATAGACA 58.683 52.381 0.00 0.00 0.00 3.41
948 981 0.036858 GACTGGGTGTCCTGAGCTTC 60.037 60.000 0.00 0.00 39.69 3.86
949 982 0.764369 TGACTGGGTGTCCTGAGCTT 60.764 55.000 0.00 0.00 44.75 3.74
960 993 1.125093 TCATCCAACGGTGACTGGGT 61.125 55.000 0.00 0.00 33.19 4.51
973 1006 0.034767 CCCAAAGCTCAGCTCATCCA 60.035 55.000 0.00 0.00 38.25 3.41
988 1021 4.402528 CGCCATCCGACCACCCAA 62.403 66.667 0.00 0.00 40.02 4.12
1038 1077 1.077644 CCTCGACTCCTTCCTCCGA 60.078 63.158 0.00 0.00 0.00 4.55
1308 1347 2.940410 GCAAGTAGGCGCTGGTTAATTA 59.060 45.455 7.64 0.00 0.00 1.40
1385 1424 7.385778 TCAAATTAACAACTCCGGAATTAGG 57.614 36.000 5.23 0.00 0.00 2.69
1653 1692 3.756783 CGGGGAGGAGGAGGAGGT 61.757 72.222 0.00 0.00 0.00 3.85
1654 1693 1.731324 ATACGGGGAGGAGGAGGAGG 61.731 65.000 0.00 0.00 0.00 4.30
1655 1694 0.188834 AATACGGGGAGGAGGAGGAG 59.811 60.000 0.00 0.00 0.00 3.69
1656 1695 0.105658 CAATACGGGGAGGAGGAGGA 60.106 60.000 0.00 0.00 0.00 3.71
1657 1696 0.105658 TCAATACGGGGAGGAGGAGG 60.106 60.000 0.00 0.00 0.00 4.30
1658 1697 1.041437 GTCAATACGGGGAGGAGGAG 58.959 60.000 0.00 0.00 0.00 3.69
1659 1698 0.398098 GGTCAATACGGGGAGGAGGA 60.398 60.000 0.00 0.00 0.00 3.71
1837 1878 6.988580 ACATCACACACACATCCATCTAATAG 59.011 38.462 0.00 0.00 0.00 1.73
1849 1890 1.213491 GCGTACACATCACACACACA 58.787 50.000 0.00 0.00 0.00 3.72
1850 1891 1.213491 TGCGTACACATCACACACAC 58.787 50.000 0.00 0.00 0.00 3.82
1979 2023 0.695924 TCTCGGCAAAAATCCCCAGA 59.304 50.000 0.00 0.00 0.00 3.86
1980 2024 1.544724 TTCTCGGCAAAAATCCCCAG 58.455 50.000 0.00 0.00 0.00 4.45
1981 2025 2.230130 ATTCTCGGCAAAAATCCCCA 57.770 45.000 0.00 0.00 0.00 4.96
2002 2047 6.540914 TGTTATTAAAGTAATGAAGCTCCCCG 59.459 38.462 0.00 0.00 0.00 5.73
2019 2064 9.328845 GGGGTAGTTGTAATCGAATGTTATTAA 57.671 33.333 0.00 0.00 0.00 1.40
2024 2069 5.046159 TCAGGGGTAGTTGTAATCGAATGTT 60.046 40.000 0.00 0.00 0.00 2.71
2039 2084 3.706594 TCTCATTACAGCTTCAGGGGTAG 59.293 47.826 0.00 0.00 0.00 3.18
2042 2087 3.634397 TTCTCATTACAGCTTCAGGGG 57.366 47.619 0.00 0.00 0.00 4.79
2058 2103 4.527564 CACACAAACGTTCATCCTTTCTC 58.472 43.478 0.00 0.00 0.00 2.87
2075 2120 1.419381 TTCAGACTACTGGCCACACA 58.581 50.000 0.00 0.00 43.60 3.72
2086 2131 4.072131 GCATGTTCCTTGGTTTCAGACTA 58.928 43.478 0.00 0.00 0.00 2.59
2088 2133 2.029918 GGCATGTTCCTTGGTTTCAGAC 60.030 50.000 0.00 0.00 0.00 3.51
2089 2134 2.158475 AGGCATGTTCCTTGGTTTCAGA 60.158 45.455 0.00 0.00 30.82 3.27
2091 2136 1.962807 CAGGCATGTTCCTTGGTTTCA 59.037 47.619 0.00 0.00 33.25 2.69
2092 2137 1.337167 GCAGGCATGTTCCTTGGTTTC 60.337 52.381 0.00 0.00 33.25 2.78
2094 2139 0.178953 AGCAGGCATGTTCCTTGGTT 60.179 50.000 0.00 0.00 33.25 3.67
2095 2140 0.178953 AAGCAGGCATGTTCCTTGGT 60.179 50.000 0.00 0.00 33.25 3.67
2096 2141 1.747355 CTAAGCAGGCATGTTCCTTGG 59.253 52.381 0.00 0.00 33.25 3.61
2119 2164 1.145571 AGCAGTGTGGGGGAACTTTA 58.854 50.000 0.00 0.00 0.00 1.85
2128 2173 0.620556 AAGGATGGTAGCAGTGTGGG 59.379 55.000 0.00 0.00 0.00 4.61
2137 2182 2.774234 AGACATGTCCCAAGGATGGTAG 59.226 50.000 22.21 0.00 46.01 3.18
2200 2245 8.803201 TTGATCAATTGTAGCGTCTATCTTAG 57.197 34.615 3.38 0.00 0.00 2.18
2236 2281 2.288886 GCTGTTAACCTCTGGTCTTCGT 60.289 50.000 2.48 0.00 33.12 3.85
2256 2301 2.293170 GGAAGTGGATTGCTTAGAGGC 58.707 52.381 0.00 0.00 0.00 4.70
2306 2424 4.312443 CAAGAAGGCATCATTTTTGCACT 58.688 39.130 0.00 0.00 41.95 4.40
2317 2435 0.322816 TGGCACTCCAAGAAGGCATC 60.323 55.000 0.00 0.00 39.99 3.91
2319 2437 3.249805 TGGCACTCCAAGAAGGCA 58.750 55.556 0.00 0.00 39.99 4.75
2328 2446 3.291611 CCAAAGCCATGGCACTCC 58.708 61.111 37.18 8.97 44.88 3.85
2339 2457 1.892474 TGGTCCAGTTATTGCCAAAGC 59.108 47.619 0.00 0.00 40.48 3.51
2344 2462 2.084546 GTCACTGGTCCAGTTATTGCC 58.915 52.381 22.52 0.00 42.59 4.52
2354 2472 0.404040 TTCAATGGGGTCACTGGTCC 59.596 55.000 0.00 0.00 0.00 4.46
2357 2475 0.323725 CCCTTCAATGGGGTCACTGG 60.324 60.000 0.00 0.00 43.45 4.00
2370 2488 3.394606 AGAAGCTTGGAGTAAACCCTTCA 59.605 43.478 2.10 0.00 32.29 3.02
2392 2510 2.039418 CGGTCCCATCTGTCCTTCATA 58.961 52.381 0.00 0.00 0.00 2.15
2393 2511 0.833287 CGGTCCCATCTGTCCTTCAT 59.167 55.000 0.00 0.00 0.00 2.57
2401 2519 1.021390 GTGCAACTCGGTCCCATCTG 61.021 60.000 0.00 0.00 0.00 2.90
2423 2541 2.352032 GGTGTGGAGGACGAGGAGG 61.352 68.421 0.00 0.00 0.00 4.30
2430 2548 1.079750 GAAGCTCGGTGTGGAGGAC 60.080 63.158 0.00 0.00 34.56 3.85
2433 2551 1.081892 CATTGAAGCTCGGTGTGGAG 58.918 55.000 0.00 0.00 37.11 3.86
2466 2584 9.269453 CAGATGTTAGATAGAAAATCAGCATCA 57.731 33.333 0.00 0.00 33.57 3.07
2491 2609 1.475034 GGCTATTGTTGGCGATCTCCA 60.475 52.381 0.00 0.00 0.00 3.86
2493 2611 1.599542 GTGGCTATTGTTGGCGATCTC 59.400 52.381 0.00 0.00 0.00 2.75
2495 2613 0.663153 GGTGGCTATTGTTGGCGATC 59.337 55.000 0.00 0.00 0.00 3.69
2496 2614 0.034574 TGGTGGCTATTGTTGGCGAT 60.035 50.000 0.00 0.00 0.00 4.58
2506 2624 2.822637 CGGCATCCCTGGTGGCTAT 61.823 63.158 8.82 0.00 39.73 2.97
2513 2631 3.221389 CCAATGCGGCATCCCTGG 61.221 66.667 16.98 16.17 0.00 4.45
2525 2643 3.383761 GTGCTTTCACAAAGTCCCAATG 58.616 45.455 0.00 0.00 42.66 2.82
2526 2644 3.733443 GTGCTTTCACAAAGTCCCAAT 57.267 42.857 0.00 0.00 42.66 3.16
2538 2656 1.614903 CAGGGAGCATTTGTGCTTTCA 59.385 47.619 4.24 0.00 46.36 2.69
2539 2657 1.067354 CCAGGGAGCATTTGTGCTTTC 60.067 52.381 4.24 1.03 46.36 2.62
2540 2658 0.971386 CCAGGGAGCATTTGTGCTTT 59.029 50.000 4.24 0.00 46.36 3.51
2541 2659 0.901580 CCCAGGGAGCATTTGTGCTT 60.902 55.000 0.00 0.00 46.36 3.91
2543 2661 1.607467 ACCCAGGGAGCATTTGTGC 60.607 57.895 14.54 0.00 0.00 4.57
2544 2662 0.251297 TCACCCAGGGAGCATTTGTG 60.251 55.000 14.54 0.00 0.00 3.33
2545 2663 0.706433 ATCACCCAGGGAGCATTTGT 59.294 50.000 14.54 0.00 0.00 2.83
2546 2664 1.856629 AATCACCCAGGGAGCATTTG 58.143 50.000 14.54 0.00 0.00 2.32
2547 2665 2.568509 CAAAATCACCCAGGGAGCATTT 59.431 45.455 14.54 10.12 0.00 2.32
2548 2666 2.181975 CAAAATCACCCAGGGAGCATT 58.818 47.619 14.54 3.92 0.00 3.56
2549 2667 1.620524 CCAAAATCACCCAGGGAGCAT 60.621 52.381 14.54 0.00 0.00 3.79
2550 2668 0.251742 CCAAAATCACCCAGGGAGCA 60.252 55.000 14.54 0.00 0.00 4.26
2551 2669 0.251787 ACCAAAATCACCCAGGGAGC 60.252 55.000 14.54 0.00 0.00 4.70
2552 2670 3.449746 TTACCAAAATCACCCAGGGAG 57.550 47.619 14.54 3.89 0.00 4.30
2553 2671 3.335183 TGATTACCAAAATCACCCAGGGA 59.665 43.478 14.54 0.00 32.21 4.20
2554 2672 3.707316 TGATTACCAAAATCACCCAGGG 58.293 45.455 2.85 2.85 32.21 4.45
2555 2673 5.421693 TCATTGATTACCAAAATCACCCAGG 59.578 40.000 0.06 0.00 38.43 4.45
2556 2674 6.071447 TGTCATTGATTACCAAAATCACCCAG 60.071 38.462 0.06 0.00 38.43 4.45
2557 2675 5.777223 TGTCATTGATTACCAAAATCACCCA 59.223 36.000 0.06 0.00 38.43 4.51
2558 2676 6.279513 TGTCATTGATTACCAAAATCACCC 57.720 37.500 0.06 0.00 38.43 4.61
2559 2677 7.151308 TGTTGTCATTGATTACCAAAATCACC 58.849 34.615 0.06 0.00 38.43 4.02
2560 2678 8.761575 ATGTTGTCATTGATTACCAAAATCAC 57.238 30.769 0.06 0.00 38.43 3.06
2617 2735 9.388506 CTCCATTGTTGAACTCATCTAAAGTAT 57.611 33.333 0.00 0.00 0.00 2.12
2618 2736 8.375506 ACTCCATTGTTGAACTCATCTAAAGTA 58.624 33.333 0.00 0.00 0.00 2.24
2619 2737 7.173907 CACTCCATTGTTGAACTCATCTAAAGT 59.826 37.037 0.00 0.00 0.00 2.66
2620 2738 7.361542 CCACTCCATTGTTGAACTCATCTAAAG 60.362 40.741 0.00 0.00 0.00 1.85
2621 2739 6.430925 CCACTCCATTGTTGAACTCATCTAAA 59.569 38.462 0.00 0.00 0.00 1.85
2622 2740 5.939883 CCACTCCATTGTTGAACTCATCTAA 59.060 40.000 0.00 0.00 0.00 2.10
2623 2741 5.013079 ACCACTCCATTGTTGAACTCATCTA 59.987 40.000 0.00 0.00 0.00 1.98
2624 2742 4.202503 ACCACTCCATTGTTGAACTCATCT 60.203 41.667 0.00 0.00 0.00 2.90
2625 2743 4.074970 ACCACTCCATTGTTGAACTCATC 58.925 43.478 0.00 0.00 0.00 2.92
2626 2744 4.104383 ACCACTCCATTGTTGAACTCAT 57.896 40.909 0.00 0.00 0.00 2.90
2627 2745 3.576078 ACCACTCCATTGTTGAACTCA 57.424 42.857 0.00 0.00 0.00 3.41
2628 2746 4.455877 CCTTACCACTCCATTGTTGAACTC 59.544 45.833 0.00 0.00 0.00 3.01
2629 2747 4.104102 TCCTTACCACTCCATTGTTGAACT 59.896 41.667 0.00 0.00 0.00 3.01
2630 2748 4.215613 GTCCTTACCACTCCATTGTTGAAC 59.784 45.833 0.00 0.00 0.00 3.18
2631 2749 4.141367 TGTCCTTACCACTCCATTGTTGAA 60.141 41.667 0.00 0.00 0.00 2.69
2632 2750 3.392947 TGTCCTTACCACTCCATTGTTGA 59.607 43.478 0.00 0.00 0.00 3.18
2633 2751 3.750371 TGTCCTTACCACTCCATTGTTG 58.250 45.455 0.00 0.00 0.00 3.33
2634 2752 4.104102 TCTTGTCCTTACCACTCCATTGTT 59.896 41.667 0.00 0.00 0.00 2.83
2635 2753 3.650942 TCTTGTCCTTACCACTCCATTGT 59.349 43.478 0.00 0.00 0.00 2.71
2636 2754 4.256920 CTCTTGTCCTTACCACTCCATTG 58.743 47.826 0.00 0.00 0.00 2.82
2637 2755 3.264450 CCTCTTGTCCTTACCACTCCATT 59.736 47.826 0.00 0.00 0.00 3.16
2638 2756 2.840651 CCTCTTGTCCTTACCACTCCAT 59.159 50.000 0.00 0.00 0.00 3.41
2639 2757 2.158219 TCCTCTTGTCCTTACCACTCCA 60.158 50.000 0.00 0.00 0.00 3.86
2640 2758 2.537143 TCCTCTTGTCCTTACCACTCC 58.463 52.381 0.00 0.00 0.00 3.85
2641 2759 3.515901 ACATCCTCTTGTCCTTACCACTC 59.484 47.826 0.00 0.00 0.00 3.51
2642 2760 3.261897 CACATCCTCTTGTCCTTACCACT 59.738 47.826 0.00 0.00 0.00 4.00
2643 2761 3.600388 CACATCCTCTTGTCCTTACCAC 58.400 50.000 0.00 0.00 0.00 4.16
2644 2762 2.571653 CCACATCCTCTTGTCCTTACCA 59.428 50.000 0.00 0.00 0.00 3.25
2645 2763 2.838202 TCCACATCCTCTTGTCCTTACC 59.162 50.000 0.00 0.00 0.00 2.85
2646 2764 4.254492 GTTCCACATCCTCTTGTCCTTAC 58.746 47.826 0.00 0.00 0.00 2.34
2647 2765 3.263425 GGTTCCACATCCTCTTGTCCTTA 59.737 47.826 0.00 0.00 0.00 2.69
2648 2766 2.040412 GGTTCCACATCCTCTTGTCCTT 59.960 50.000 0.00 0.00 0.00 3.36
2649 2767 1.630878 GGTTCCACATCCTCTTGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
2650 2768 1.340114 GGGTTCCACATCCTCTTGTCC 60.340 57.143 0.00 0.00 0.00 4.02
2651 2769 1.340114 GGGGTTCCACATCCTCTTGTC 60.340 57.143 0.00 0.00 0.00 3.18
2652 2770 0.698818 GGGGTTCCACATCCTCTTGT 59.301 55.000 0.00 0.00 0.00 3.16
2653 2771 0.995024 AGGGGTTCCACATCCTCTTG 59.005 55.000 0.00 0.00 28.96 3.02
2654 2772 1.636003 GAAGGGGTTCCACATCCTCTT 59.364 52.381 0.00 0.00 45.92 2.85
2655 2773 1.290134 GAAGGGGTTCCACATCCTCT 58.710 55.000 0.00 0.00 35.87 3.69
2656 2774 0.991920 TGAAGGGGTTCCACATCCTC 59.008 55.000 0.00 0.00 34.83 3.71
2657 2775 1.455822 TTGAAGGGGTTCCACATCCT 58.544 50.000 0.00 0.00 34.83 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.