Multiple sequence alignment - TraesCS5B01G084400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G084400 chr5B 100.000 4387 0 0 1 4387 106960339 106955953 0.000000e+00 8102
1 TraesCS5B01G084400 chr5B 95.590 2086 41 13 1001 3062 105533399 105535457 0.000000e+00 3295
2 TraesCS5B01G084400 chr5B 91.797 829 47 11 1 816 105529774 105530594 0.000000e+00 1134
3 TraesCS5B01G084400 chr5B 90.714 280 18 5 3421 3697 105535757 105536031 2.490000e-97 366
4 TraesCS5B01G084400 chr5B 96.629 178 6 0 3236 3413 105535462 105535639 3.320000e-76 296
5 TraesCS5B01G084400 chr5B 95.833 96 4 0 540 635 105530459 105530554 5.870000e-34 156
6 TraesCS5B01G084400 chr5B 91.667 108 5 4 697 803 575518740 575518844 3.540000e-31 147
7 TraesCS5B01G084400 chr5B 93.814 97 5 1 546 642 286699925 286699830 1.270000e-30 145
8 TraesCS5B01G084400 chr5D 89.460 1499 105 30 1611 3078 97583315 97581839 0.000000e+00 1844
9 TraesCS5B01G084400 chr5D 90.143 842 45 12 1 816 97588466 97587637 0.000000e+00 1061
10 TraesCS5B01G084400 chr5D 88.123 261 20 5 958 1211 97587578 97587322 2.560000e-77 300
11 TraesCS5B01G084400 chr5D 86.029 272 25 9 1223 1491 97583692 97583431 3.340000e-71 279
12 TraesCS5B01G084400 chr5D 90.517 116 6 5 689 803 468686590 468686701 9.830000e-32 148
13 TraesCS5B01G084400 chr5D 93.939 99 4 2 524 622 486160805 486160709 9.830000e-32 148
14 TraesCS5B01G084400 chr5D 93.939 99 3 3 688 785 97587912 97587816 3.540000e-31 147
15 TraesCS5B01G084400 chr5D 73.291 468 78 30 2199 2645 97583178 97582737 1.280000e-25 128
16 TraesCS5B01G084400 chr5A 89.437 1420 110 23 1687 3075 106147033 106148443 0.000000e+00 1755
17 TraesCS5B01G084400 chr5A 91.957 746 37 14 1 736 106145133 106145865 0.000000e+00 1024
18 TraesCS5B01G084400 chr5A 87.113 388 34 11 828 1211 106146018 106146393 4.060000e-115 425
19 TraesCS5B01G084400 chr5A 80.047 426 57 21 3845 4244 106149139 106149562 1.540000e-74 291
20 TraesCS5B01G084400 chr5A 85.274 292 27 10 1207 1492 106146441 106146722 2.000000e-73 287
21 TraesCS5B01G084400 chr5A 89.062 192 13 7 632 816 106145872 106146062 9.490000e-57 231
22 TraesCS5B01G084400 chr2D 96.471 170 6 0 3069 3238 632423579 632423748 9.290000e-72 281
23 TraesCS5B01G084400 chr2D 95.882 170 7 0 3069 3238 632685870 632686039 4.320000e-70 276
24 TraesCS5B01G084400 chr2D 93.750 96 5 1 536 630 386708812 386708907 4.570000e-30 143
25 TraesCS5B01G084400 chr4D 96.471 170 5 1 3072 3241 31719825 31719993 3.340000e-71 279
26 TraesCS5B01G084400 chr4A 96.429 168 6 0 3071 3238 101750114 101750281 1.200000e-70 278
27 TraesCS5B01G084400 chr4A 93.407 182 10 2 3061 3241 582530154 582529974 7.230000e-68 268
28 TraesCS5B01G084400 chr1D 93.651 189 7 4 3057 3243 490423332 490423147 1.200000e-70 278
29 TraesCS5B01G084400 chr1D 94.565 92 4 1 689 780 427630750 427630660 1.640000e-29 141
30 TraesCS5B01G084400 chr7B 95.402 174 7 1 3067 3240 412800308 412800480 4.320000e-70 276
31 TraesCS5B01G084400 chr3A 94.413 179 7 3 3061 3238 217823192 217823368 5.590000e-69 272
32 TraesCS5B01G084400 chr3A 97.561 82 1 1 689 770 520963732 520963812 5.920000e-29 139
33 TraesCS5B01G084400 chr1B 91.710 193 12 2 3074 3266 628050851 628050663 9.360000e-67 265
34 TraesCS5B01G084400 chr1B 93.939 99 2 3 549 647 22073981 22073887 3.540000e-31 147
35 TraesCS5B01G084400 chr1B 93.939 99 3 3 541 637 653876097 653876000 3.540000e-31 147
36 TraesCS5B01G084400 chr3B 89.565 115 9 3 689 802 526684573 526684685 4.570000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G084400 chr5B 106955953 106960339 4386 True 8102.000000 8102 100.000000 1 4387 1 chr5B.!!$R1 4386
1 TraesCS5B01G084400 chr5B 105529774 105536031 6257 False 1049.400000 3295 94.112600 1 3697 5 chr5B.!!$F2 3696
2 TraesCS5B01G084400 chr5D 97581839 97588466 6627 True 626.500000 1844 86.830833 1 3078 6 chr5D.!!$R2 3077
3 TraesCS5B01G084400 chr5A 106145133 106149562 4429 False 668.833333 1755 87.148333 1 4244 6 chr5A.!!$F1 4243

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
921 1449 0.040425 CGGAGTCGCAACCCAAAAAG 60.040 55.0 0.00 0.0 0.00 2.27 F
927 1455 0.102120 CGCAACCCAAAAAGAGTGCA 59.898 50.0 0.00 0.0 0.00 4.57 F
1505 7937 0.614415 CTCTGTCCTCCTGGCAGACT 60.614 60.0 17.94 0.0 39.65 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2117 8744 3.188667 GGTTCCTCTTTTAGGCAAGAACG 59.811 47.826 0.0 0.0 46.10 3.95 R
2909 9557 3.281727 TGTCCATTGTTGCCCTATCTC 57.718 47.619 0.0 0.0 0.00 2.75 R
3456 10236 0.991146 TGGCTTGCACCATCCTCTTA 59.009 50.000 0.0 0.0 33.75 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 1.976045 GCGTCGGTAAATTGCAAGTTG 59.024 47.619 21.57 5.79 0.00 3.16
96 109 3.490759 CACGCACGCATGGAGTCC 61.491 66.667 0.73 0.73 0.00 3.85
302 330 1.606531 GCCATTGCCACCTCTCTCT 59.393 57.895 0.00 0.00 0.00 3.10
328 356 1.832912 GTCGATGGATCCCCTGCTT 59.167 57.895 9.90 0.00 0.00 3.91
333 361 0.337428 ATGGATCCCCTGCTTTGCTT 59.663 50.000 9.90 0.00 0.00 3.91
347 375 3.578688 CTTTGCTTGGTAATGGTTCAGC 58.421 45.455 0.00 0.00 0.00 4.26
348 376 1.544724 TGCTTGGTAATGGTTCAGCC 58.455 50.000 0.00 0.00 37.90 4.85
349 377 0.451783 GCTTGGTAATGGTTCAGCCG 59.548 55.000 0.00 0.00 41.21 5.52
350 378 1.821216 CTTGGTAATGGTTCAGCCGT 58.179 50.000 0.00 0.00 41.21 5.68
374 402 2.251371 GCGACGTGCAAACCTTCC 59.749 61.111 0.00 0.00 45.45 3.46
382 411 2.039418 GTGCAAACCTTCCTCCCTTTT 58.961 47.619 0.00 0.00 0.00 2.27
630 659 0.460311 AGCGGAGTCGTATCCCTTTG 59.540 55.000 3.57 0.00 35.82 2.77
649 791 8.087750 TCCCTTTGTTTTGCTCTTTATTATGTG 58.912 33.333 0.00 0.00 0.00 3.21
654 796 2.917933 TGCTCTTTATTATGTGCGGCT 58.082 42.857 0.00 0.00 0.00 5.52
659 801 4.257731 TCTTTATTATGTGCGGCTCAACA 58.742 39.130 8.95 1.19 0.00 3.33
660 802 4.094294 TCTTTATTATGTGCGGCTCAACAC 59.906 41.667 8.95 0.00 37.31 3.32
672 814 4.669197 GCGGCTCAACACAATTGTAGTTAG 60.669 45.833 11.53 14.48 33.55 2.34
796 945 7.094420 GCTATTTTTGCTTTTCCTCTCTTCTCT 60.094 37.037 0.00 0.00 0.00 3.10
821 970 3.402628 TTCCCCTTCTCTTTTGAGTCG 57.597 47.619 0.00 0.00 46.30 4.18
822 971 1.623811 TCCCCTTCTCTTTTGAGTCGG 59.376 52.381 0.00 0.00 46.30 4.79
823 972 1.339151 CCCCTTCTCTTTTGAGTCGGG 60.339 57.143 12.14 12.14 46.56 5.14
824 973 1.443802 CCTTCTCTTTTGAGTCGGGC 58.556 55.000 0.00 0.00 46.30 6.13
825 974 1.002544 CCTTCTCTTTTGAGTCGGGCT 59.997 52.381 0.00 0.00 46.30 5.19
826 975 2.233922 CCTTCTCTTTTGAGTCGGGCTA 59.766 50.000 0.00 0.00 46.30 3.93
849 1377 7.094420 GCTATTTTTGCTTTTCCTCTCTTCTCT 60.094 37.037 0.00 0.00 0.00 3.10
921 1449 0.040425 CGGAGTCGCAACCCAAAAAG 60.040 55.000 0.00 0.00 0.00 2.27
922 1450 1.314730 GGAGTCGCAACCCAAAAAGA 58.685 50.000 0.00 0.00 0.00 2.52
924 1452 1.947456 GAGTCGCAACCCAAAAAGAGT 59.053 47.619 0.00 0.00 0.00 3.24
926 1454 0.383949 TCGCAACCCAAAAAGAGTGC 59.616 50.000 0.00 0.00 0.00 4.40
927 1455 0.102120 CGCAACCCAAAAAGAGTGCA 59.898 50.000 0.00 0.00 0.00 4.57
928 1456 1.470632 CGCAACCCAAAAAGAGTGCAA 60.471 47.619 0.00 0.00 0.00 4.08
931 1460 3.063861 GCAACCCAAAAAGAGTGCAAAAG 59.936 43.478 0.00 0.00 0.00 2.27
990 1519 1.205417 ACATAACACGTAACCCTCCGG 59.795 52.381 0.00 0.00 0.00 5.14
1033 3799 5.507650 CCCTAACTAACCAGATAGAACTCGC 60.508 48.000 0.00 0.00 30.60 5.03
1034 3800 3.694535 ACTAACCAGATAGAACTCGCG 57.305 47.619 0.00 0.00 0.00 5.87
1075 3847 2.753009 AAAGAGCAGACATGGCGGCA 62.753 55.000 25.96 16.34 36.08 5.69
1076 3848 3.200593 GAGCAGACATGGCGGCAG 61.201 66.667 25.96 12.11 36.08 4.85
1080 3852 4.393155 AGACATGGCGGCAGCGAA 62.393 61.111 19.29 0.00 46.35 4.70
1081 3853 3.869272 GACATGGCGGCAGCGAAG 61.869 66.667 19.29 7.18 46.35 3.79
1166 3947 3.430098 GGTCAACTATGTCAGCCTCTCTG 60.430 52.174 0.00 0.00 44.21 3.35
1211 3993 5.991328 ATTTATGTGTCGCCTACTCATTG 57.009 39.130 6.70 0.00 41.39 2.82
1212 3994 1.656652 ATGTGTCGCCTACTCATTGC 58.343 50.000 0.00 0.00 38.80 3.56
1237 7666 9.113838 GCTGATGTGGAATTACTATATTATGGG 57.886 37.037 0.00 0.00 0.00 4.00
1256 7685 4.043200 GTCCGGTTTGCTGCCTGC 62.043 66.667 0.00 0.00 43.25 4.85
1301 7730 4.770010 TGGAATTTGGATGGTTAGGTTGTC 59.230 41.667 0.00 0.00 0.00 3.18
1499 7931 1.272425 ACTCTGACTCTGTCCTCCTGG 60.272 57.143 0.00 0.00 0.00 4.45
1505 7937 0.614415 CTCTGTCCTCCTGGCAGACT 60.614 60.000 17.94 0.00 39.65 3.24
1507 7939 0.614415 CTGTCCTCCTGGCAGACTCT 60.614 60.000 17.94 0.00 38.72 3.24
1575 8013 9.804758 GCTTGTTATCAGTTTAGACTAGTGTAT 57.195 33.333 0.00 0.00 33.90 2.29
1608 8190 3.555956 GGTGAGACTATAATGTGGCGTTG 59.444 47.826 0.00 0.00 0.00 4.10
1957 8582 1.446907 CCTGCAGTGATCCTGTTGAC 58.553 55.000 13.81 0.00 43.55 3.18
1982 8607 5.241403 TCTAAATTTCTGCCTGAGAACCA 57.759 39.130 0.00 0.00 40.60 3.67
1998 8623 4.441792 AGAACCAATGTTTTTCTGTTGGC 58.558 39.130 3.08 0.00 43.79 4.52
2000 8625 2.134346 CCAATGTTTTTCTGTTGGCGG 58.866 47.619 0.00 0.00 35.21 6.13
2045 8671 3.808726 TGACATTGAATTTTTGCACTGGC 59.191 39.130 0.00 0.00 41.68 4.85
2058 8685 1.133790 GCACTGGCTGATCATGTTTCC 59.866 52.381 0.00 0.00 36.96 3.13
2355 8982 7.057149 TGAATCGCTTACTTTAGTTACTTGC 57.943 36.000 0.00 0.00 0.00 4.01
2385 9012 7.043565 CGCTTAGTTTAGTTACTTATCCCCAA 58.956 38.462 0.00 0.00 0.00 4.12
2568 9211 7.226441 TGTCTGGCAGCTGAACATTTATATAT 58.774 34.615 20.43 0.00 0.00 0.86
3062 9710 4.261614 GGTAATAATGGCAGCCAAAGTAGC 60.262 45.833 20.84 18.00 36.95 3.58
3066 9714 0.890542 TGGCAGCCAAAGTAGCACTG 60.891 55.000 13.33 0.00 0.00 3.66
3075 9723 6.201044 CAGCCAAAGTAGCACTGTATATGTAC 59.799 42.308 0.00 0.00 0.00 2.90
3076 9724 6.098409 AGCCAAAGTAGCACTGTATATGTACT 59.902 38.462 1.08 0.00 0.00 2.73
3077 9725 6.421202 GCCAAAGTAGCACTGTATATGTACTC 59.579 42.308 1.08 0.00 0.00 2.59
3078 9726 6.924060 CCAAAGTAGCACTGTATATGTACTCC 59.076 42.308 1.08 0.00 0.00 3.85
3079 9727 6.651975 AAGTAGCACTGTATATGTACTCCC 57.348 41.667 1.08 0.00 0.00 4.30
3080 9728 5.954757 AGTAGCACTGTATATGTACTCCCT 58.045 41.667 1.08 0.00 0.00 4.20
3081 9729 6.005198 AGTAGCACTGTATATGTACTCCCTC 58.995 44.000 1.08 0.00 0.00 4.30
3082 9730 4.153411 AGCACTGTATATGTACTCCCTCC 58.847 47.826 1.08 0.00 0.00 4.30
3083 9731 3.057456 GCACTGTATATGTACTCCCTCCG 60.057 52.174 1.08 0.00 0.00 4.63
3084 9732 4.142790 CACTGTATATGTACTCCCTCCGT 58.857 47.826 1.08 0.00 0.00 4.69
3085 9733 4.583489 CACTGTATATGTACTCCCTCCGTT 59.417 45.833 1.08 0.00 0.00 4.44
3086 9734 4.826183 ACTGTATATGTACTCCCTCCGTTC 59.174 45.833 1.08 0.00 0.00 3.95
3087 9735 4.147321 TGTATATGTACTCCCTCCGTTCC 58.853 47.826 1.08 0.00 0.00 3.62
3088 9736 1.683943 TATGTACTCCCTCCGTTCCG 58.316 55.000 0.00 0.00 0.00 4.30
3089 9737 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
3090 9738 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3091 9739 0.890683 GTACTCCCTCCGTTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
3092 9740 1.479730 GTACTCCCTCCGTTCCGAAAT 59.520 52.381 0.00 0.00 0.00 2.17
3093 9741 1.856629 ACTCCCTCCGTTCCGAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3094 9742 2.395619 ACTCCCTCCGTTCCGAAATAT 58.604 47.619 0.00 0.00 0.00 1.28
3095 9743 2.770232 ACTCCCTCCGTTCCGAAATATT 59.230 45.455 0.00 0.00 0.00 1.28
3096 9744 3.199289 ACTCCCTCCGTTCCGAAATATTT 59.801 43.478 0.00 0.00 0.00 1.40
3097 9745 3.537580 TCCCTCCGTTCCGAAATATTTG 58.462 45.455 5.17 0.00 0.00 2.32
3098 9746 3.054948 TCCCTCCGTTCCGAAATATTTGT 60.055 43.478 5.17 0.00 0.00 2.83
3099 9747 3.311596 CCCTCCGTTCCGAAATATTTGTC 59.688 47.826 5.17 0.00 0.00 3.18
3100 9748 4.189231 CCTCCGTTCCGAAATATTTGTCT 58.811 43.478 5.17 0.00 0.00 3.41
3101 9749 4.634443 CCTCCGTTCCGAAATATTTGTCTT 59.366 41.667 5.17 0.00 0.00 3.01
3102 9750 5.123344 CCTCCGTTCCGAAATATTTGTCTTT 59.877 40.000 5.17 0.00 0.00 2.52
3103 9751 6.173191 TCCGTTCCGAAATATTTGTCTTTC 57.827 37.500 5.17 0.00 0.00 2.62
3104 9752 5.935789 TCCGTTCCGAAATATTTGTCTTTCT 59.064 36.000 5.17 0.00 30.80 2.52
3105 9753 7.098477 TCCGTTCCGAAATATTTGTCTTTCTA 58.902 34.615 5.17 0.00 30.80 2.10
3106 9754 7.277098 TCCGTTCCGAAATATTTGTCTTTCTAG 59.723 37.037 5.17 0.00 30.80 2.43
3107 9755 7.277098 CCGTTCCGAAATATTTGTCTTTCTAGA 59.723 37.037 5.17 0.00 30.80 2.43
3108 9756 8.321716 CGTTCCGAAATATTTGTCTTTCTAGAG 58.678 37.037 5.17 0.00 30.80 2.43
3109 9757 9.367444 GTTCCGAAATATTTGTCTTTCTAGAGA 57.633 33.333 5.17 0.00 30.80 3.10
3120 9768 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3121 9769 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
3122 9770 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
3123 9771 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
3124 9772 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
3125 9773 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
3126 9774 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3127 9775 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3128 9776 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3130 9778 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3131 9779 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3132 9780 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
3133 9781 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3134 9782 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3135 9783 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3136 9784 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3137 9785 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3138 9786 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3139 9787 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3140 9788 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3141 9789 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3142 9790 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3143 9791 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3144 9792 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3145 9793 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3146 9794 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3147 9795 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3148 9796 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3149 9797 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3150 9798 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3151 9799 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3152 9800 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3153 9801 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3154 9802 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3196 9844 9.639601 CATACATCCGTATGTGATAGTACATTT 57.360 33.333 3.56 0.00 46.70 2.32
3197 9845 7.946655 ACATCCGTATGTGATAGTACATTTG 57.053 36.000 0.00 0.00 44.79 2.32
3198 9846 7.722363 ACATCCGTATGTGATAGTACATTTGA 58.278 34.615 0.00 0.00 44.79 2.69
3199 9847 8.201464 ACATCCGTATGTGATAGTACATTTGAA 58.799 33.333 0.00 0.00 44.79 2.69
3200 9848 9.040939 CATCCGTATGTGATAGTACATTTGAAA 57.959 33.333 0.00 0.00 41.31 2.69
3201 9849 9.778741 ATCCGTATGTGATAGTACATTTGAAAT 57.221 29.630 0.00 0.00 41.31 2.17
3202 9850 9.040939 TCCGTATGTGATAGTACATTTGAAATG 57.959 33.333 15.82 15.82 41.31 2.32
3203 9851 8.826710 CCGTATGTGATAGTACATTTGAAATGT 58.173 33.333 24.78 24.78 41.31 2.71
3204 9852 9.849607 CGTATGTGATAGTACATTTGAAATGTC 57.150 33.333 25.09 16.64 41.31 3.06
3229 9877 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3230 9878 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3231 9879 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3232 9880 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3233 9881 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3234 9882 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3333 9984 0.739112 GTCTTCTTGAGCTCTGCCCG 60.739 60.000 16.19 1.00 0.00 6.13
3354 10005 2.357009 GCCAGTTCATGCAGTGGATTAG 59.643 50.000 21.75 0.00 39.40 1.73
3370 10021 6.321690 AGTGGATTAGGCCGATGATACTATAC 59.678 42.308 0.00 0.00 0.00 1.47
3456 10236 5.047164 TGCCTGTGCAAATAATCAGTTTGAT 60.047 36.000 0.00 0.00 46.66 2.57
3510 10362 6.547283 TGCATTCGTTTATTCGCTCAAAATA 58.453 32.000 0.00 0.00 0.00 1.40
3531 10383 1.596260 AGCGTGATTTGCGAGATCATG 59.404 47.619 10.11 10.11 41.36 3.07
3568 10420 5.301551 AGTGTAGGCTGTGAGAGATTATGAG 59.698 44.000 0.00 0.00 0.00 2.90
3577 10429 3.056304 GAGAGATTATGAGCGGACTTGC 58.944 50.000 0.00 0.00 0.00 4.01
3649 10504 2.106187 TAGGCGGCCCCTAAAATAGA 57.894 50.000 17.02 0.00 44.08 1.98
3650 10505 1.446016 AGGCGGCCCCTAAAATAGAT 58.554 50.000 17.02 0.00 44.08 1.98
3663 10518 8.956446 CCCTAAAATAGATGGGGAATGTTTAT 57.044 34.615 0.00 0.00 39.42 1.40
3664 10519 8.806146 CCCTAAAATAGATGGGGAATGTTTATG 58.194 37.037 0.00 0.00 39.42 1.90
3702 10557 3.371063 GCTCGGTCGGTCACCTCA 61.371 66.667 0.00 0.00 44.21 3.86
3706 10561 1.030488 TCGGTCGGTCACCTCATCTC 61.030 60.000 0.00 0.00 44.21 2.75
3707 10562 1.313091 CGGTCGGTCACCTCATCTCA 61.313 60.000 0.00 0.00 44.21 3.27
3709 10564 1.202463 GGTCGGTCACCTCATCTCATG 60.202 57.143 0.00 0.00 42.84 3.07
3712 10567 1.661341 GGTCACCTCATCTCATGCAC 58.339 55.000 0.00 0.00 0.00 4.57
3713 10568 1.284657 GTCACCTCATCTCATGCACG 58.715 55.000 0.00 0.00 0.00 5.34
3714 10569 0.460811 TCACCTCATCTCATGCACGC 60.461 55.000 0.00 0.00 0.00 5.34
3715 10570 1.520120 ACCTCATCTCATGCACGCG 60.520 57.895 3.53 3.53 0.00 6.01
3716 10571 1.520120 CCTCATCTCATGCACGCGT 60.520 57.895 5.58 5.58 0.00 6.01
3718 10573 1.485838 CTCATCTCATGCACGCGTCC 61.486 60.000 9.86 0.00 0.00 4.79
3719 10574 2.202932 ATCTCATGCACGCGTCCC 60.203 61.111 9.86 3.70 0.00 4.46
3720 10575 2.725312 ATCTCATGCACGCGTCCCT 61.725 57.895 9.86 0.00 0.00 4.20
3721 10576 1.391933 ATCTCATGCACGCGTCCCTA 61.392 55.000 9.86 0.00 0.00 3.53
3722 10577 1.068083 CTCATGCACGCGTCCCTAT 59.932 57.895 9.86 0.00 0.00 2.57
3723 10578 1.217585 CTCATGCACGCGTCCCTATG 61.218 60.000 9.86 11.75 0.00 2.23
3724 10579 2.108976 ATGCACGCGTCCCTATGG 59.891 61.111 9.86 0.00 0.00 2.74
3725 10580 3.460672 ATGCACGCGTCCCTATGGG 62.461 63.158 9.86 0.00 46.11 4.00
3750 10605 4.436998 CCTGACCCGACGCTCCAC 62.437 72.222 0.00 0.00 0.00 4.02
3751 10606 4.436998 CTGACCCGACGCTCCACC 62.437 72.222 0.00 0.00 0.00 4.61
3756 10611 4.452733 CCGACGCTCCACCCCTTC 62.453 72.222 0.00 0.00 0.00 3.46
3757 10612 4.452733 CGACGCTCCACCCCTTCC 62.453 72.222 0.00 0.00 0.00 3.46
3758 10613 3.003763 GACGCTCCACCCCTTCCT 61.004 66.667 0.00 0.00 0.00 3.36
3759 10614 3.003763 ACGCTCCACCCCTTCCTC 61.004 66.667 0.00 0.00 0.00 3.71
3760 10615 2.685380 CGCTCCACCCCTTCCTCT 60.685 66.667 0.00 0.00 0.00 3.69
3761 10616 2.294078 CGCTCCACCCCTTCCTCTT 61.294 63.158 0.00 0.00 0.00 2.85
3762 10617 1.301293 GCTCCACCCCTTCCTCTTG 59.699 63.158 0.00 0.00 0.00 3.02
3763 10618 1.492993 GCTCCACCCCTTCCTCTTGT 61.493 60.000 0.00 0.00 0.00 3.16
3764 10619 0.615850 CTCCACCCCTTCCTCTTGTC 59.384 60.000 0.00 0.00 0.00 3.18
3765 10620 0.840722 TCCACCCCTTCCTCTTGTCC 60.841 60.000 0.00 0.00 0.00 4.02
3766 10621 1.133809 CCACCCCTTCCTCTTGTCCA 61.134 60.000 0.00 0.00 0.00 4.02
3767 10622 0.036875 CACCCCTTCCTCTTGTCCAC 59.963 60.000 0.00 0.00 0.00 4.02
3768 10623 0.401395 ACCCCTTCCTCTTGTCCACA 60.401 55.000 0.00 0.00 0.00 4.17
3769 10624 0.995024 CCCCTTCCTCTTGTCCACAT 59.005 55.000 0.00 0.00 0.00 3.21
3770 10625 1.065126 CCCCTTCCTCTTGTCCACATC 60.065 57.143 0.00 0.00 0.00 3.06
3771 10626 1.912043 CCCTTCCTCTTGTCCACATCT 59.088 52.381 0.00 0.00 0.00 2.90
3772 10627 2.307098 CCCTTCCTCTTGTCCACATCTT 59.693 50.000 0.00 0.00 0.00 2.40
3773 10628 3.245052 CCCTTCCTCTTGTCCACATCTTT 60.245 47.826 0.00 0.00 0.00 2.52
3774 10629 4.006319 CCTTCCTCTTGTCCACATCTTTC 58.994 47.826 0.00 0.00 0.00 2.62
3775 10630 4.263243 CCTTCCTCTTGTCCACATCTTTCT 60.263 45.833 0.00 0.00 0.00 2.52
3776 10631 4.543590 TCCTCTTGTCCACATCTTTCTC 57.456 45.455 0.00 0.00 0.00 2.87
3777 10632 3.056536 TCCTCTTGTCCACATCTTTCTCG 60.057 47.826 0.00 0.00 0.00 4.04
3778 10633 3.056536 CCTCTTGTCCACATCTTTCTCGA 60.057 47.826 0.00 0.00 0.00 4.04
3779 10634 4.172505 CTCTTGTCCACATCTTTCTCGAG 58.827 47.826 5.93 5.93 0.00 4.04
3780 10635 2.370281 TGTCCACATCTTTCTCGAGC 57.630 50.000 7.81 0.00 0.00 5.03
3781 10636 1.618343 TGTCCACATCTTTCTCGAGCA 59.382 47.619 7.81 0.00 0.00 4.26
3782 10637 2.037121 TGTCCACATCTTTCTCGAGCAA 59.963 45.455 7.81 1.59 0.00 3.91
3783 10638 3.265791 GTCCACATCTTTCTCGAGCAAT 58.734 45.455 7.81 0.00 0.00 3.56
3784 10639 3.686726 GTCCACATCTTTCTCGAGCAATT 59.313 43.478 7.81 0.00 0.00 2.32
3785 10640 3.935203 TCCACATCTTTCTCGAGCAATTC 59.065 43.478 7.81 0.00 0.00 2.17
3798 10653 2.534231 GCAATTCGCTTCCTCACTTC 57.466 50.000 0.00 0.00 37.77 3.01
3799 10654 1.131315 GCAATTCGCTTCCTCACTTCC 59.869 52.381 0.00 0.00 37.77 3.46
3800 10655 1.740025 CAATTCGCTTCCTCACTTCCC 59.260 52.381 0.00 0.00 0.00 3.97
3801 10656 1.280457 ATTCGCTTCCTCACTTCCCT 58.720 50.000 0.00 0.00 0.00 4.20
3802 10657 0.608640 TTCGCTTCCTCACTTCCCTC 59.391 55.000 0.00 0.00 0.00 4.30
3803 10658 0.541998 TCGCTTCCTCACTTCCCTCA 60.542 55.000 0.00 0.00 0.00 3.86
3804 10659 0.390472 CGCTTCCTCACTTCCCTCAC 60.390 60.000 0.00 0.00 0.00 3.51
3810 10665 1.065854 CCTCACTTCCCTCACATGTCC 60.066 57.143 0.00 0.00 0.00 4.02
3813 10668 1.194781 ACTTCCCTCACATGTCCGCT 61.195 55.000 0.00 0.00 0.00 5.52
3833 10688 2.432628 CGCCACTCAACTCGTCCC 60.433 66.667 0.00 0.00 0.00 4.46
3834 10689 2.932234 CGCCACTCAACTCGTCCCT 61.932 63.158 0.00 0.00 0.00 4.20
3835 10690 1.371558 GCCACTCAACTCGTCCCTT 59.628 57.895 0.00 0.00 0.00 3.95
3836 10691 0.951040 GCCACTCAACTCGTCCCTTG 60.951 60.000 0.00 0.00 0.00 3.61
3837 10692 0.320771 CCACTCAACTCGTCCCTTGG 60.321 60.000 0.00 0.00 0.00 3.61
3838 10693 0.951040 CACTCAACTCGTCCCTTGGC 60.951 60.000 0.00 0.00 0.00 4.52
3839 10694 1.371183 CTCAACTCGTCCCTTGGCA 59.629 57.895 0.00 0.00 0.00 4.92
3840 10695 0.036010 CTCAACTCGTCCCTTGGCAT 60.036 55.000 0.00 0.00 0.00 4.40
3841 10696 0.321564 TCAACTCGTCCCTTGGCATG 60.322 55.000 0.00 0.00 0.00 4.06
3842 10697 0.606401 CAACTCGTCCCTTGGCATGT 60.606 55.000 0.00 0.00 0.00 3.21
3843 10698 0.110486 AACTCGTCCCTTGGCATGTT 59.890 50.000 0.00 0.00 0.00 2.71
3854 10709 3.589579 GCATGTTGCCGACCATCA 58.410 55.556 0.00 0.00 37.42 3.07
3861 10716 2.045926 GCCGACCATCAACCTGCT 60.046 61.111 0.00 0.00 0.00 4.24
3872 10727 3.806949 TCAACCTGCTCTAAACCCAAT 57.193 42.857 0.00 0.00 0.00 3.16
3911 10766 2.136728 CAGATGCTATGCTGTGAGCTC 58.863 52.381 6.82 6.82 42.97 4.09
3916 10771 1.837648 CTATGCTGTGAGCTCGTGAG 58.162 55.000 9.64 5.68 42.97 3.51
3917 10772 1.403323 CTATGCTGTGAGCTCGTGAGA 59.597 52.381 9.64 0.00 42.97 3.27
3918 10773 0.822811 ATGCTGTGAGCTCGTGAGAT 59.177 50.000 9.64 0.00 42.97 2.75
3919 10774 0.605083 TGCTGTGAGCTCGTGAGATT 59.395 50.000 9.64 0.00 42.97 2.40
3920 10775 1.276415 GCTGTGAGCTCGTGAGATTC 58.724 55.000 9.64 0.00 40.84 2.52
3921 10776 1.403382 GCTGTGAGCTCGTGAGATTCA 60.403 52.381 9.64 1.07 40.84 2.57
3922 10777 2.257894 CTGTGAGCTCGTGAGATTCAC 58.742 52.381 19.53 19.53 46.31 3.18
3930 10785 2.654939 GTGAGATTCACGACGGAGC 58.345 57.895 0.00 0.00 37.67 4.70
3931 10786 1.134530 GTGAGATTCACGACGGAGCG 61.135 60.000 0.00 0.00 37.67 5.03
3932 10787 1.136984 GAGATTCACGACGGAGCGT 59.863 57.895 0.00 0.00 46.88 5.07
3945 10800 0.951040 GGAGCGTAGTGTTGCAAGCT 60.951 55.000 8.21 8.21 37.69 3.74
3984 10858 1.331756 GTGTTGTTGTGAGCAGAGGTG 59.668 52.381 0.00 0.00 0.00 4.00
3999 10873 2.233431 AGAGGTGCTTGTTGTTGCAAAA 59.767 40.909 0.00 0.00 41.10 2.44
4005 10879 1.328374 CTTGTTGTTGCAAAAGCCAGC 59.672 47.619 0.00 0.00 0.00 4.85
4064 10939 2.180159 AATGGGCGGTGCTACGACTT 62.180 55.000 6.43 0.00 42.77 3.01
4071 10946 1.335810 CGGTGCTACGACTTAGGCATA 59.664 52.381 0.00 0.00 37.05 3.14
4073 10948 3.552273 CGGTGCTACGACTTAGGCATATT 60.552 47.826 0.00 0.00 37.05 1.28
4075 10950 4.448060 GGTGCTACGACTTAGGCATATTTC 59.552 45.833 0.00 0.00 37.05 2.17
4080 10955 4.510571 ACGACTTAGGCATATTTCCGTTT 58.489 39.130 0.00 0.00 0.00 3.60
4083 10958 3.380320 ACTTAGGCATATTTCCGTTTGGC 59.620 43.478 0.00 0.00 34.14 4.52
4102 10977 4.112341 ACTCGCGGTGCTACGACC 62.112 66.667 6.13 0.00 34.08 4.79
4126 11001 2.326550 GCGGGTTGTTGTGTGTCG 59.673 61.111 0.00 0.00 0.00 4.35
4128 11003 1.639534 CGGGTTGTTGTGTGTCGAC 59.360 57.895 9.11 9.11 0.00 4.20
4130 11005 0.745128 GGGTTGTTGTGTGTCGACCA 60.745 55.000 14.12 7.88 39.24 4.02
4133 11008 0.722282 TTGTTGTGTGTCGACCAACG 59.278 50.000 22.61 0.00 40.97 4.10
4150 11025 1.080501 CGATGGTGTGACGAGCTGT 60.081 57.895 0.00 0.00 0.00 4.40
4176 11051 3.345808 CGACGGCTTGTGGTGTGG 61.346 66.667 0.00 0.00 0.00 4.17
4178 11053 2.515991 ACGGCTTGTGGTGTGGTG 60.516 61.111 0.00 0.00 0.00 4.17
4179 11054 2.203139 CGGCTTGTGGTGTGGTGA 60.203 61.111 0.00 0.00 0.00 4.02
4180 11055 2.542907 CGGCTTGTGGTGTGGTGAC 61.543 63.158 0.00 0.00 0.00 3.67
4182 11057 1.453015 GCTTGTGGTGTGGTGACCA 60.453 57.895 0.00 0.00 44.09 4.02
4183 11058 1.447317 GCTTGTGGTGTGGTGACCAG 61.447 60.000 3.58 0.00 46.96 4.00
4184 11059 0.107214 CTTGTGGTGTGGTGACCAGT 60.107 55.000 3.58 0.00 46.96 4.00
4185 11060 0.393673 TTGTGGTGTGGTGACCAGTG 60.394 55.000 3.58 0.00 46.96 3.66
4186 11061 1.223487 GTGGTGTGGTGACCAGTGT 59.777 57.895 3.58 0.00 46.96 3.55
4191 11078 0.461163 TGTGGTGACCAGTGTTGTCG 60.461 55.000 3.58 0.00 35.46 4.35
4223 11110 1.194896 GAGACGCGATGTGCTACGAC 61.195 60.000 15.93 0.00 43.27 4.34
4244 11131 2.672996 GGCGGTGGTGCTTGTCAT 60.673 61.111 0.00 0.00 34.52 3.06
4245 11132 2.690778 GGCGGTGGTGCTTGTCATC 61.691 63.158 0.00 0.00 34.52 2.92
4246 11133 3.027170 GCGGTGGTGCTTGTCATCG 62.027 63.158 0.00 0.00 40.12 3.84
4247 11134 1.667830 CGGTGGTGCTTGTCATCGT 60.668 57.895 0.00 0.00 33.36 3.73
4248 11135 1.626654 CGGTGGTGCTTGTCATCGTC 61.627 60.000 0.00 0.00 33.36 4.20
4249 11136 1.626654 GGTGGTGCTTGTCATCGTCG 61.627 60.000 0.00 0.00 0.00 5.12
4250 11137 2.027073 TGGTGCTTGTCATCGTCGC 61.027 57.895 0.00 0.00 0.00 5.19
4251 11138 2.027073 GGTGCTTGTCATCGTCGCA 61.027 57.895 0.00 0.00 0.00 5.10
4252 11139 1.361668 GGTGCTTGTCATCGTCGCAT 61.362 55.000 0.00 0.00 32.75 4.73
4253 11140 0.025513 GTGCTTGTCATCGTCGCATC 59.974 55.000 0.00 0.00 32.75 3.91
4254 11141 1.083806 TGCTTGTCATCGTCGCATCC 61.084 55.000 0.00 0.00 0.00 3.51
4255 11142 1.083806 GCTTGTCATCGTCGCATCCA 61.084 55.000 0.00 0.00 0.00 3.41
4256 11143 0.926155 CTTGTCATCGTCGCATCCAG 59.074 55.000 0.00 0.00 0.00 3.86
4257 11144 0.530288 TTGTCATCGTCGCATCCAGA 59.470 50.000 0.00 0.00 0.00 3.86
4258 11145 0.101219 TGTCATCGTCGCATCCAGAG 59.899 55.000 0.00 0.00 0.00 3.35
4259 11146 0.382158 GTCATCGTCGCATCCAGAGA 59.618 55.000 0.00 0.00 0.00 3.10
4260 11147 0.382158 TCATCGTCGCATCCAGAGAC 59.618 55.000 0.00 0.00 42.79 3.36
4261 11148 0.101219 CATCGTCGCATCCAGAGACA 59.899 55.000 0.00 0.00 46.03 3.41
4262 11149 0.101399 ATCGTCGCATCCAGAGACAC 59.899 55.000 0.00 0.00 46.03 3.67
4263 11150 1.869574 CGTCGCATCCAGAGACACG 60.870 63.158 0.00 0.00 46.03 4.49
4264 11151 1.506718 GTCGCATCCAGAGACACGA 59.493 57.895 0.00 0.00 45.19 4.35
4265 11152 0.798771 GTCGCATCCAGAGACACGAC 60.799 60.000 0.00 0.00 45.19 4.34
4266 11153 1.869574 CGCATCCAGAGACACGACG 60.870 63.158 0.00 0.00 0.00 5.12
4267 11154 1.506718 GCATCCAGAGACACGACGA 59.493 57.895 0.00 0.00 0.00 4.20
4268 11155 0.524392 GCATCCAGAGACACGACGAG 60.524 60.000 0.00 0.00 0.00 4.18
4269 11156 0.524392 CATCCAGAGACACGACGAGC 60.524 60.000 0.00 0.00 0.00 5.03
4270 11157 0.678366 ATCCAGAGACACGACGAGCT 60.678 55.000 0.00 0.00 0.00 4.09
4271 11158 0.036671 TCCAGAGACACGACGAGCTA 60.037 55.000 0.00 0.00 0.00 3.32
4272 11159 0.097325 CCAGAGACACGACGAGCTAC 59.903 60.000 0.00 0.00 0.00 3.58
4274 11161 0.389556 AGAGACACGACGAGCTACGA 60.390 55.000 0.00 0.00 45.77 3.43
4275 11162 0.247223 GAGACACGACGAGCTACGAC 60.247 60.000 0.00 6.29 45.77 4.34
4280 11167 4.053067 GACGAGCTACGACGGTTG 57.947 61.111 11.64 0.00 45.77 3.77
4281 11168 1.499056 GACGAGCTACGACGGTTGA 59.501 57.895 11.64 0.00 45.77 3.18
4282 11169 0.520827 GACGAGCTACGACGGTTGAG 60.521 60.000 11.64 0.00 45.77 3.02
4283 11170 1.226323 CGAGCTACGACGGTTGAGG 60.226 63.158 1.53 0.00 45.77 3.86
4284 11171 1.881602 GAGCTACGACGGTTGAGGT 59.118 57.895 1.53 1.21 0.00 3.85
4285 11172 0.179169 GAGCTACGACGGTTGAGGTC 60.179 60.000 1.53 6.79 0.00 3.85
4286 11173 0.892358 AGCTACGACGGTTGAGGTCA 60.892 55.000 1.53 0.00 34.04 4.02
4287 11174 0.456312 GCTACGACGGTTGAGGTCAG 60.456 60.000 1.53 0.00 34.04 3.51
4288 11175 0.879765 CTACGACGGTTGAGGTCAGT 59.120 55.000 1.53 0.00 34.04 3.41
4289 11176 0.594602 TACGACGGTTGAGGTCAGTG 59.405 55.000 1.53 0.00 34.04 3.66
4290 11177 2.022129 CGACGGTTGAGGTCAGTGC 61.022 63.158 0.00 0.00 34.04 4.40
4291 11178 2.022129 GACGGTTGAGGTCAGTGCG 61.022 63.158 0.00 0.00 34.56 5.34
4292 11179 2.738521 CGGTTGAGGTCAGTGCGG 60.739 66.667 0.00 0.00 0.00 5.69
4293 11180 3.050275 GGTTGAGGTCAGTGCGGC 61.050 66.667 0.00 0.00 0.00 6.53
4294 11181 3.414700 GTTGAGGTCAGTGCGGCG 61.415 66.667 0.51 0.51 0.00 6.46
4295 11182 3.611674 TTGAGGTCAGTGCGGCGA 61.612 61.111 12.98 0.00 0.00 5.54
4296 11183 3.158537 TTGAGGTCAGTGCGGCGAA 62.159 57.895 12.98 0.00 0.00 4.70
4297 11184 2.357034 GAGGTCAGTGCGGCGAAA 60.357 61.111 12.98 0.00 0.00 3.46
4298 11185 2.357517 AGGTCAGTGCGGCGAAAG 60.358 61.111 12.98 0.00 0.00 2.62
4299 11186 2.357034 GGTCAGTGCGGCGAAAGA 60.357 61.111 12.98 0.00 0.00 2.52
4300 11187 2.668280 GGTCAGTGCGGCGAAAGAC 61.668 63.158 12.98 12.38 0.00 3.01
4308 11195 2.251371 GGCGAAAGACGTGCAACC 59.749 61.111 0.00 0.00 44.60 3.77
4309 11196 2.127758 GCGAAAGACGTGCAACCG 60.128 61.111 0.00 0.00 44.60 4.44
4310 11197 2.127758 CGAAAGACGTGCAACCGC 60.128 61.111 0.00 0.00 37.22 5.68
4319 11206 4.053526 TGCAACCGCGCTACCGTA 62.054 61.111 5.56 0.00 42.97 4.02
4320 11207 3.548231 GCAACCGCGCTACCGTAC 61.548 66.667 5.56 0.00 36.67 3.67
4321 11208 2.180017 CAACCGCGCTACCGTACT 59.820 61.111 5.56 0.00 36.67 2.73
4322 11209 1.444895 CAACCGCGCTACCGTACTT 60.445 57.895 5.56 0.00 36.67 2.24
4323 11210 1.153958 AACCGCGCTACCGTACTTC 60.154 57.895 5.56 0.00 36.67 3.01
4324 11211 1.865788 AACCGCGCTACCGTACTTCA 61.866 55.000 5.56 0.00 36.67 3.02
4325 11212 1.153978 CCGCGCTACCGTACTTCAA 60.154 57.895 5.56 0.00 36.67 2.69
4326 11213 1.138047 CCGCGCTACCGTACTTCAAG 61.138 60.000 5.56 0.00 36.67 3.02
4327 11214 0.179181 CGCGCTACCGTACTTCAAGA 60.179 55.000 5.56 0.00 36.67 3.02
4328 11215 1.533338 CGCGCTACCGTACTTCAAGAT 60.533 52.381 5.56 0.00 36.67 2.40
4329 11216 1.852895 GCGCTACCGTACTTCAAGATG 59.147 52.381 0.00 0.00 36.67 2.90
4330 11217 2.460918 CGCTACCGTACTTCAAGATGG 58.539 52.381 0.00 0.00 0.00 3.51
4331 11218 2.159282 CGCTACCGTACTTCAAGATGGT 60.159 50.000 0.00 0.00 0.00 3.55
4332 11219 3.187700 GCTACCGTACTTCAAGATGGTG 58.812 50.000 9.35 3.04 0.00 4.17
4333 11220 2.094762 ACCGTACTTCAAGATGGTGC 57.905 50.000 0.00 0.00 0.00 5.01
4334 11221 1.346395 ACCGTACTTCAAGATGGTGCA 59.654 47.619 0.00 0.00 0.00 4.57
4335 11222 2.027192 ACCGTACTTCAAGATGGTGCAT 60.027 45.455 0.00 0.00 0.00 3.96
4336 11223 2.609459 CCGTACTTCAAGATGGTGCATC 59.391 50.000 0.00 0.00 40.80 3.91
4337 11224 2.282555 CGTACTTCAAGATGGTGCATCG 59.717 50.000 0.00 0.00 44.67 3.84
4338 11225 1.742761 ACTTCAAGATGGTGCATCGG 58.257 50.000 0.00 0.00 44.67 4.18
4339 11226 1.003580 ACTTCAAGATGGTGCATCGGT 59.996 47.619 0.00 0.00 44.67 4.69
4340 11227 1.399440 CTTCAAGATGGTGCATCGGTG 59.601 52.381 0.00 0.00 44.67 4.94
4341 11228 0.392863 TCAAGATGGTGCATCGGTGG 60.393 55.000 0.00 0.00 44.67 4.61
4342 11229 1.750399 AAGATGGTGCATCGGTGGC 60.750 57.895 0.00 0.00 44.67 5.01
4343 11230 3.576356 GATGGTGCATCGGTGGCG 61.576 66.667 0.00 0.00 31.01 5.69
4348 11235 3.457263 TGCATCGGTGGCGCTCTA 61.457 61.111 7.64 0.00 0.00 2.43
4349 11236 2.659897 GCATCGGTGGCGCTCTAG 60.660 66.667 7.64 0.00 0.00 2.43
4350 11237 3.120105 CATCGGTGGCGCTCTAGA 58.880 61.111 7.64 2.73 0.00 2.43
4351 11238 1.007964 CATCGGTGGCGCTCTAGAG 60.008 63.158 15.85 15.85 0.00 2.43
4352 11239 2.196925 ATCGGTGGCGCTCTAGAGG 61.197 63.158 21.23 12.11 0.00 3.69
4353 11240 3.905678 CGGTGGCGCTCTAGAGGG 61.906 72.222 27.80 27.80 43.38 4.30
4354 11241 3.541713 GGTGGCGCTCTAGAGGGG 61.542 72.222 31.22 17.06 41.16 4.79
4355 11242 3.541713 GTGGCGCTCTAGAGGGGG 61.542 72.222 31.22 13.94 41.16 5.40
4377 11264 8.413309 GGGGGTTTAGACTAGTTGTAAAATTT 57.587 34.615 11.12 0.00 0.00 1.82
4378 11265 9.519191 GGGGGTTTAGACTAGTTGTAAAATTTA 57.481 33.333 11.12 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.643485 CAATTTACCGACGCGCGC 60.643 61.111 32.58 23.91 39.11 6.86
46 47 2.643485 GCAATTTACCGACGCGCG 60.643 61.111 30.96 30.96 40.47 6.86
96 109 4.787563 GCGCTGTCAATCTATTTCCATGTG 60.788 45.833 0.00 0.00 0.00 3.21
266 289 2.876645 GTCGCTTCTGTCGCCGAG 60.877 66.667 0.00 0.00 0.00 4.63
302 330 1.298116 GATCCATCGACGACGCGAA 60.298 57.895 15.93 3.51 44.22 4.70
328 356 1.892474 GGCTGAACCATTACCAAGCAA 59.108 47.619 0.00 0.00 38.86 3.91
333 361 0.687920 TCACGGCTGAACCATTACCA 59.312 50.000 0.00 0.00 39.03 3.25
347 375 3.403057 CACGTCGCCAAGTCACGG 61.403 66.667 0.00 0.00 37.86 4.94
348 376 4.059459 GCACGTCGCCAAGTCACG 62.059 66.667 0.00 0.00 39.48 4.35
349 377 2.042520 TTTGCACGTCGCCAAGTCAC 62.043 55.000 7.38 0.00 41.33 3.67
350 378 1.815840 TTTGCACGTCGCCAAGTCA 60.816 52.632 7.38 0.00 41.33 3.41
374 402 0.250727 TCCACCGAAGCAAAAGGGAG 60.251 55.000 0.00 0.00 0.00 4.30
382 411 1.116536 TACACCACTCCACCGAAGCA 61.117 55.000 0.00 0.00 0.00 3.91
630 659 4.265320 GCCGCACATAATAAAGAGCAAAAC 59.735 41.667 0.00 0.00 0.00 2.43
649 791 1.535462 ACTACAATTGTGTTGAGCCGC 59.465 47.619 21.42 0.00 39.30 6.53
654 796 6.016610 GGGCTTTCTAACTACAATTGTGTTGA 60.017 38.462 21.42 16.67 39.30 3.18
659 801 6.969993 TTTGGGCTTTCTAACTACAATTGT 57.030 33.333 16.68 16.68 0.00 2.71
660 802 7.433680 ACTTTTGGGCTTTCTAACTACAATTG 58.566 34.615 3.24 3.24 0.00 2.32
672 814 6.482973 TCAATTGATGAAACTTTTGGGCTTTC 59.517 34.615 3.38 0.00 34.30 2.62
771 913 8.334263 AGAGAAGAGAGGAAAAGCAAAAATAG 57.666 34.615 0.00 0.00 0.00 1.73
772 914 8.697507 AAGAGAAGAGAGGAAAAGCAAAAATA 57.302 30.769 0.00 0.00 0.00 1.40
773 915 7.594351 AAGAGAAGAGAGGAAAAGCAAAAAT 57.406 32.000 0.00 0.00 0.00 1.82
803 952 1.339151 CCCGACTCAAAAGAGAAGGGG 60.339 57.143 16.42 11.48 38.10 4.79
816 965 3.850122 AAAGCAAAAATAGCCCGACTC 57.150 42.857 0.00 0.00 0.00 3.36
817 966 3.056821 GGAAAAGCAAAAATAGCCCGACT 60.057 43.478 0.00 0.00 0.00 4.18
818 967 3.056821 AGGAAAAGCAAAAATAGCCCGAC 60.057 43.478 0.00 0.00 0.00 4.79
820 969 3.193479 AGAGGAAAAGCAAAAATAGCCCG 59.807 43.478 0.00 0.00 0.00 6.13
821 970 4.464244 AGAGAGGAAAAGCAAAAATAGCCC 59.536 41.667 0.00 0.00 0.00 5.19
822 971 5.651387 AGAGAGGAAAAGCAAAAATAGCC 57.349 39.130 0.00 0.00 0.00 3.93
823 972 6.918626 AGAAGAGAGGAAAAGCAAAAATAGC 58.081 36.000 0.00 0.00 0.00 2.97
824 973 8.334263 AGAGAAGAGAGGAAAAGCAAAAATAG 57.666 34.615 0.00 0.00 0.00 1.73
825 974 8.697507 AAGAGAAGAGAGGAAAAGCAAAAATA 57.302 30.769 0.00 0.00 0.00 1.40
826 975 7.594351 AAGAGAAGAGAGGAAAAGCAAAAAT 57.406 32.000 0.00 0.00 0.00 1.82
921 1449 2.164422 GTCTATTGGGCCTTTTGCACTC 59.836 50.000 4.53 0.00 46.54 3.51
922 1450 2.171003 GTCTATTGGGCCTTTTGCACT 58.829 47.619 4.53 0.00 46.54 4.40
924 1452 1.555967 GGTCTATTGGGCCTTTTGCA 58.444 50.000 4.53 0.00 43.89 4.08
926 1454 2.230130 TGGGTCTATTGGGCCTTTTG 57.770 50.000 4.53 0.00 0.00 2.44
927 1455 4.832560 ATATGGGTCTATTGGGCCTTTT 57.167 40.909 4.53 0.00 0.00 2.27
928 1456 5.170198 TCTATATGGGTCTATTGGGCCTTT 58.830 41.667 4.53 0.00 0.00 3.11
931 1460 4.362677 TCTCTATATGGGTCTATTGGGCC 58.637 47.826 0.00 0.00 0.00 5.80
1008 1537 5.507650 CGAGTTCTATCTGGTTAGTTAGGGC 60.508 48.000 0.00 0.00 30.49 5.19
1009 1538 5.507650 GCGAGTTCTATCTGGTTAGTTAGGG 60.508 48.000 0.00 0.00 30.49 3.53
1034 3800 2.956077 ATCTCCTCCCGCTCCTTCCC 62.956 65.000 0.00 0.00 0.00 3.97
1077 3849 4.735132 TCTCCAACGCCGCCTTCG 62.735 66.667 0.00 0.00 0.00 3.79
1078 3850 2.358247 TTCTCCAACGCCGCCTTC 60.358 61.111 0.00 0.00 0.00 3.46
1079 3851 2.185310 ATCTTCTCCAACGCCGCCTT 62.185 55.000 0.00 0.00 0.00 4.35
1080 3852 2.660064 ATCTTCTCCAACGCCGCCT 61.660 57.895 0.00 0.00 0.00 5.52
1081 3853 2.125106 ATCTTCTCCAACGCCGCC 60.125 61.111 0.00 0.00 0.00 6.13
1082 3854 1.424493 CTCATCTTCTCCAACGCCGC 61.424 60.000 0.00 0.00 0.00 6.53
1083 3855 0.807667 CCTCATCTTCTCCAACGCCG 60.808 60.000 0.00 0.00 0.00 6.46
1088 3860 0.984230 AACGCCCTCATCTTCTCCAA 59.016 50.000 0.00 0.00 0.00 3.53
1166 3947 2.223618 ACTAGATCGAAGCGAGAAAGGC 60.224 50.000 0.00 0.00 39.91 4.35
1211 3993 9.113838 CCCATAATATAGTAATTCCACATCAGC 57.886 37.037 0.00 0.00 0.00 4.26
1237 7666 2.032681 AGGCAGCAAACCGGACTC 59.967 61.111 9.46 0.00 0.00 3.36
1301 7730 1.238439 ACACATCAAAAGGTCAGCGG 58.762 50.000 0.00 0.00 0.00 5.52
1499 7931 0.962855 GCCCCCAAGAAAGAGTCTGC 60.963 60.000 0.00 0.00 36.40 4.26
1505 7937 1.499007 AGAAACTGCCCCCAAGAAAGA 59.501 47.619 0.00 0.00 0.00 2.52
1507 7939 1.817740 CGAGAAACTGCCCCCAAGAAA 60.818 52.381 0.00 0.00 0.00 2.52
1575 8013 0.107410 AGTCTCACCAACGCCACAAA 60.107 50.000 0.00 0.00 0.00 2.83
1633 8246 2.221169 TGTGCAGAACCTAGCAAGTTG 58.779 47.619 0.00 0.00 43.20 3.16
1926 8551 4.614555 TCACTGCAGGCATAATTTAACG 57.385 40.909 19.93 0.00 0.00 3.18
1957 8582 5.124617 GGTTCTCAGGCAGAAATTTAGAAGG 59.875 44.000 0.00 0.00 43.10 3.46
1982 8607 3.306019 GGATCCGCCAACAGAAAAACATT 60.306 43.478 0.00 0.00 36.34 2.71
1998 8623 5.124776 TGCATAACTTAAAGTTTGGGATCCG 59.875 40.000 5.45 0.00 39.51 4.18
2000 8625 7.702348 GTCATGCATAACTTAAAGTTTGGGATC 59.298 37.037 0.00 0.00 39.51 3.36
2045 8671 9.655769 CTAAAAATACATCGGAAACATGATCAG 57.344 33.333 0.00 0.00 0.00 2.90
2117 8744 3.188667 GGTTCCTCTTTTAGGCAAGAACG 59.811 47.826 0.00 0.00 46.10 3.95
2355 8982 8.689069 GGATAAGTAACTAAACTAAGCGATTCG 58.311 37.037 0.62 0.62 0.00 3.34
2490 9133 6.922957 GCAAAGTTTCAATGTCAAGGATAACA 59.077 34.615 0.00 0.00 0.00 2.41
2909 9557 3.281727 TGTCCATTGTTGCCCTATCTC 57.718 47.619 0.00 0.00 0.00 2.75
3062 9710 4.142790 ACGGAGGGAGTACATATACAGTG 58.857 47.826 0.00 0.00 33.30 3.66
3066 9714 4.780275 GGAACGGAGGGAGTACATATAC 57.220 50.000 0.00 0.00 0.00 1.47
3083 9731 9.367444 TCTCTAGAAAGACAAATATTTCGGAAC 57.633 33.333 0.00 0.00 40.33 3.62
3094 9742 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
3095 9743 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
3096 9744 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
3097 9745 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
3098 9746 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
3099 9747 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
3100 9748 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3101 9749 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3102 9750 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3103 9751 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3104 9752 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3105 9753 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3106 9754 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
3107 9755 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
3108 9756 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
3109 9757 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3110 9758 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3111 9759 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3112 9760 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3113 9761 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3114 9762 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3115 9763 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3116 9764 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3117 9765 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3118 9766 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3119 9767 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3120 9768 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3121 9769 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3122 9770 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3123 9771 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3124 9772 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3125 9773 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3126 9774 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3127 9775 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3128 9776 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3129 9777 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3130 9778 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3131 9779 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3132 9780 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3133 9781 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
3134 9782 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
3171 9819 9.639601 CAAATGTACTATCACATACGGATGTAT 57.360 33.333 14.23 10.02 44.82 2.29
3172 9820 8.852135 TCAAATGTACTATCACATACGGATGTA 58.148 33.333 14.23 2.61 44.82 2.29
3174 9822 8.587952 TTCAAATGTACTATCACATACGGATG 57.412 34.615 5.94 5.94 38.19 3.51
3175 9823 9.778741 ATTTCAAATGTACTATCACATACGGAT 57.221 29.630 0.00 0.00 38.19 4.18
3176 9824 9.040939 CATTTCAAATGTACTATCACATACGGA 57.959 33.333 1.53 0.00 38.19 4.69
3177 9825 8.826710 ACATTTCAAATGTACTATCACATACGG 58.173 33.333 14.37 0.00 38.19 4.02
3178 9826 9.849607 GACATTTCAAATGTACTATCACATACG 57.150 33.333 15.91 0.00 38.19 3.06
3203 9851 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3204 9852 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3205 9853 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3206 9854 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3207 9855 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3208 9856 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3209 9857 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3210 9858 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3211 9859 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3212 9860 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3213 9861 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3214 9862 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3215 9863 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
3216 9864 7.179872 GGTAATACTCCCTCCGTTCCTAAATAT 59.820 40.741 0.00 0.00 0.00 1.28
3217 9865 6.494835 GGTAATACTCCCTCCGTTCCTAAATA 59.505 42.308 0.00 0.00 0.00 1.40
3218 9866 5.306419 GGTAATACTCCCTCCGTTCCTAAAT 59.694 44.000 0.00 0.00 0.00 1.40
3219 9867 4.651045 GGTAATACTCCCTCCGTTCCTAAA 59.349 45.833 0.00 0.00 0.00 1.85
3220 9868 4.078980 AGGTAATACTCCCTCCGTTCCTAA 60.079 45.833 0.00 0.00 0.00 2.69
3221 9869 3.464833 AGGTAATACTCCCTCCGTTCCTA 59.535 47.826 0.00 0.00 0.00 2.94
3222 9870 2.246849 AGGTAATACTCCCTCCGTTCCT 59.753 50.000 0.00 0.00 0.00 3.36
3223 9871 2.675583 AGGTAATACTCCCTCCGTTCC 58.324 52.381 0.00 0.00 0.00 3.62
3224 9872 5.537674 TGATAAGGTAATACTCCCTCCGTTC 59.462 44.000 0.00 0.00 0.00 3.95
3225 9873 5.461327 TGATAAGGTAATACTCCCTCCGTT 58.539 41.667 0.00 0.00 0.00 4.44
3226 9874 5.070823 TGATAAGGTAATACTCCCTCCGT 57.929 43.478 0.00 0.00 0.00 4.69
3227 9875 4.463186 CCTGATAAGGTAATACTCCCTCCG 59.537 50.000 0.00 0.00 0.00 4.63
3228 9876 5.246429 CACCTGATAAGGTAATACTCCCTCC 59.754 48.000 0.00 0.00 40.85 4.30
3229 9877 5.839606 ACACCTGATAAGGTAATACTCCCTC 59.160 44.000 0.00 0.00 40.85 4.30
3230 9878 5.789535 ACACCTGATAAGGTAATACTCCCT 58.210 41.667 0.00 0.00 40.85 4.20
3231 9879 6.496144 AACACCTGATAAGGTAATACTCCC 57.504 41.667 0.00 0.00 40.85 4.30
3232 9880 6.214399 CGAACACCTGATAAGGTAATACTCC 58.786 44.000 0.00 0.00 40.85 3.85
3233 9881 5.690857 GCGAACACCTGATAAGGTAATACTC 59.309 44.000 0.00 0.00 40.85 2.59
3234 9882 5.363005 AGCGAACACCTGATAAGGTAATACT 59.637 40.000 0.00 0.00 40.85 2.12
3333 9984 1.180029 AATCCACTGCATGAACTGGC 58.820 50.000 0.00 0.00 0.00 4.85
3354 10005 3.193691 ACAGCAGTATAGTATCATCGGCC 59.806 47.826 0.00 0.00 0.00 6.13
3370 10021 6.910972 CAGCAAGACATAAATATTCACAGCAG 59.089 38.462 0.00 0.00 0.00 4.24
3392 10044 2.157738 ACTGAACCAGCAGAAATCAGC 58.842 47.619 0.00 0.00 40.86 4.26
3456 10236 0.991146 TGGCTTGCACCATCCTCTTA 59.009 50.000 0.00 0.00 33.75 2.10
3510 10362 1.725641 TGATCTCGCAAATCACGCTT 58.274 45.000 0.00 0.00 0.00 4.68
3531 10383 4.092091 CAGCCTACACTCGTTCAATTCTTC 59.908 45.833 0.00 0.00 0.00 2.87
3568 10420 3.854045 GCATCTAGTAGTAGCAAGTCCGC 60.854 52.174 10.38 0.00 0.00 5.54
3577 10429 6.590677 TGTAGCATAGTCGCATCTAGTAGTAG 59.409 42.308 0.00 0.00 0.00 2.57
3578 10430 6.461640 TGTAGCATAGTCGCATCTAGTAGTA 58.538 40.000 0.00 0.00 0.00 1.82
3579 10431 5.306394 TGTAGCATAGTCGCATCTAGTAGT 58.694 41.667 0.00 0.00 0.00 2.73
3647 10502 4.507335 CCCGATCATAAACATTCCCCATCT 60.507 45.833 0.00 0.00 0.00 2.90
3649 10504 3.766545 CCCGATCATAAACATTCCCCAT 58.233 45.455 0.00 0.00 0.00 4.00
3650 10505 2.751479 GCCCGATCATAAACATTCCCCA 60.751 50.000 0.00 0.00 0.00 4.96
3702 10557 1.391933 TAGGGACGCGTGCATGAGAT 61.392 55.000 31.68 12.24 0.00 2.75
3706 10561 2.246739 CCATAGGGACGCGTGCATG 61.247 63.158 31.68 25.00 35.59 4.06
3707 10562 2.108976 CCATAGGGACGCGTGCAT 59.891 61.111 31.68 27.74 35.59 3.96
3733 10588 4.436998 GTGGAGCGTCGGGTCAGG 62.437 72.222 0.00 0.00 42.46 3.86
3734 10589 4.436998 GGTGGAGCGTCGGGTCAG 62.437 72.222 0.00 0.00 42.46 3.51
3739 10594 4.452733 GAAGGGGTGGAGCGTCGG 62.453 72.222 0.00 0.00 0.00 4.79
3740 10595 4.452733 GGAAGGGGTGGAGCGTCG 62.453 72.222 0.00 0.00 0.00 5.12
3741 10596 3.003763 AGGAAGGGGTGGAGCGTC 61.004 66.667 0.00 0.00 0.00 5.19
3742 10597 3.003763 GAGGAAGGGGTGGAGCGT 61.004 66.667 0.00 0.00 0.00 5.07
3743 10598 2.294078 AAGAGGAAGGGGTGGAGCG 61.294 63.158 0.00 0.00 0.00 5.03
3744 10599 1.301293 CAAGAGGAAGGGGTGGAGC 59.699 63.158 0.00 0.00 0.00 4.70
3745 10600 0.615850 GACAAGAGGAAGGGGTGGAG 59.384 60.000 0.00 0.00 0.00 3.86
3746 10601 0.840722 GGACAAGAGGAAGGGGTGGA 60.841 60.000 0.00 0.00 0.00 4.02
3747 10602 1.133809 TGGACAAGAGGAAGGGGTGG 61.134 60.000 0.00 0.00 0.00 4.61
3748 10603 0.036875 GTGGACAAGAGGAAGGGGTG 59.963 60.000 0.00 0.00 0.00 4.61
3749 10604 0.401395 TGTGGACAAGAGGAAGGGGT 60.401 55.000 0.00 0.00 0.00 4.95
3750 10605 0.995024 ATGTGGACAAGAGGAAGGGG 59.005 55.000 0.00 0.00 0.00 4.79
3751 10606 1.912043 AGATGTGGACAAGAGGAAGGG 59.088 52.381 0.00 0.00 0.00 3.95
3752 10607 3.710209 AAGATGTGGACAAGAGGAAGG 57.290 47.619 0.00 0.00 0.00 3.46
3753 10608 4.904241 AGAAAGATGTGGACAAGAGGAAG 58.096 43.478 0.00 0.00 0.00 3.46
3754 10609 4.561530 CGAGAAAGATGTGGACAAGAGGAA 60.562 45.833 0.00 0.00 0.00 3.36
3755 10610 3.056536 CGAGAAAGATGTGGACAAGAGGA 60.057 47.826 0.00 0.00 0.00 3.71
3756 10611 3.056536 TCGAGAAAGATGTGGACAAGAGG 60.057 47.826 0.00 0.00 0.00 3.69
3757 10612 4.172505 CTCGAGAAAGATGTGGACAAGAG 58.827 47.826 6.58 0.00 0.00 2.85
3758 10613 3.615110 GCTCGAGAAAGATGTGGACAAGA 60.615 47.826 18.75 0.00 0.00 3.02
3759 10614 2.670414 GCTCGAGAAAGATGTGGACAAG 59.330 50.000 18.75 0.00 0.00 3.16
3760 10615 2.037121 TGCTCGAGAAAGATGTGGACAA 59.963 45.455 18.75 0.00 0.00 3.18
3761 10616 1.618343 TGCTCGAGAAAGATGTGGACA 59.382 47.619 18.75 0.00 0.00 4.02
3762 10617 2.370281 TGCTCGAGAAAGATGTGGAC 57.630 50.000 18.75 0.00 0.00 4.02
3763 10618 3.616956 ATTGCTCGAGAAAGATGTGGA 57.383 42.857 18.75 0.00 0.00 4.02
3764 10619 4.270178 GAATTGCTCGAGAAAGATGTGG 57.730 45.455 18.75 0.00 0.00 4.17
3779 10634 1.131315 GGAAGTGAGGAAGCGAATTGC 59.869 52.381 0.00 0.00 46.98 3.56
3780 10635 1.740025 GGGAAGTGAGGAAGCGAATTG 59.260 52.381 0.00 0.00 0.00 2.32
3781 10636 1.630878 AGGGAAGTGAGGAAGCGAATT 59.369 47.619 0.00 0.00 0.00 2.17
3782 10637 1.208293 GAGGGAAGTGAGGAAGCGAAT 59.792 52.381 0.00 0.00 0.00 3.34
3783 10638 0.608640 GAGGGAAGTGAGGAAGCGAA 59.391 55.000 0.00 0.00 0.00 4.70
3784 10639 0.541998 TGAGGGAAGTGAGGAAGCGA 60.542 55.000 0.00 0.00 0.00 4.93
3785 10640 0.390472 GTGAGGGAAGTGAGGAAGCG 60.390 60.000 0.00 0.00 0.00 4.68
3786 10641 0.687354 TGTGAGGGAAGTGAGGAAGC 59.313 55.000 0.00 0.00 0.00 3.86
3787 10642 2.304180 ACATGTGAGGGAAGTGAGGAAG 59.696 50.000 0.00 0.00 0.00 3.46
3788 10643 2.303022 GACATGTGAGGGAAGTGAGGAA 59.697 50.000 1.15 0.00 0.00 3.36
3789 10644 1.902508 GACATGTGAGGGAAGTGAGGA 59.097 52.381 1.15 0.00 0.00 3.71
3790 10645 1.065854 GGACATGTGAGGGAAGTGAGG 60.066 57.143 1.15 0.00 0.00 3.86
3791 10646 1.404717 CGGACATGTGAGGGAAGTGAG 60.405 57.143 1.15 0.00 0.00 3.51
3792 10647 0.608130 CGGACATGTGAGGGAAGTGA 59.392 55.000 1.15 0.00 0.00 3.41
3793 10648 1.021390 GCGGACATGTGAGGGAAGTG 61.021 60.000 1.15 0.00 0.00 3.16
3794 10649 1.194781 AGCGGACATGTGAGGGAAGT 61.195 55.000 1.15 0.00 0.00 3.01
3795 10650 0.460987 GAGCGGACATGTGAGGGAAG 60.461 60.000 1.15 0.00 0.00 3.46
3796 10651 1.596934 GAGCGGACATGTGAGGGAA 59.403 57.895 1.15 0.00 0.00 3.97
3797 10652 2.710902 CGAGCGGACATGTGAGGGA 61.711 63.158 1.15 0.00 0.00 4.20
3798 10653 2.202797 CGAGCGGACATGTGAGGG 60.203 66.667 1.15 0.00 0.00 4.30
3799 10654 2.887568 GCGAGCGGACATGTGAGG 60.888 66.667 1.15 0.00 0.00 3.86
3800 10655 3.250323 CGCGAGCGGACATGTGAG 61.250 66.667 1.15 0.00 35.56 3.51
3813 10668 3.891586 GACGAGTTGAGTGGCGCGA 62.892 63.158 12.10 0.00 0.00 5.87
3837 10692 0.456653 GTTGATGGTCGGCAACATGC 60.457 55.000 0.00 0.00 42.86 4.06
3838 10693 0.171007 GGTTGATGGTCGGCAACATG 59.829 55.000 0.00 0.00 44.59 3.21
3839 10694 0.038166 AGGTTGATGGTCGGCAACAT 59.962 50.000 0.00 0.00 44.59 2.71
3840 10695 0.888736 CAGGTTGATGGTCGGCAACA 60.889 55.000 0.00 0.00 44.59 3.33
3841 10696 1.875963 CAGGTTGATGGTCGGCAAC 59.124 57.895 0.00 0.00 42.67 4.17
3842 10697 1.971167 GCAGGTTGATGGTCGGCAA 60.971 57.895 0.00 0.00 0.00 4.52
3843 10698 2.359850 GCAGGTTGATGGTCGGCA 60.360 61.111 0.00 0.00 0.00 5.69
3854 10709 3.181434 TGTGATTGGGTTTAGAGCAGGTT 60.181 43.478 0.00 0.00 0.00 3.50
3872 10727 1.383799 CCCTTTCAGCCCCATGTGA 59.616 57.895 0.00 0.00 0.00 3.58
3880 10735 0.107017 TAGCATCTGCCCTTTCAGCC 60.107 55.000 0.00 0.00 43.38 4.85
3881 10736 1.607628 CATAGCATCTGCCCTTTCAGC 59.392 52.381 0.00 0.00 43.38 4.26
3882 10737 1.607628 GCATAGCATCTGCCCTTTCAG 59.392 52.381 0.00 0.00 43.38 3.02
3883 10738 1.213678 AGCATAGCATCTGCCCTTTCA 59.786 47.619 0.00 0.00 43.38 2.69
3884 10739 1.607628 CAGCATAGCATCTGCCCTTTC 59.392 52.381 0.00 0.00 43.38 2.62
3916 10771 0.098376 ACTACGCTCCGTCGTGAATC 59.902 55.000 5.12 0.00 43.21 2.52
3917 10772 2.177950 ACTACGCTCCGTCGTGAAT 58.822 52.632 5.12 0.00 43.21 2.57
3918 10773 3.659334 ACTACGCTCCGTCGTGAA 58.341 55.556 5.12 0.00 43.21 3.18
3921 10776 1.081641 CAACACTACGCTCCGTCGT 60.082 57.895 0.00 0.00 45.49 4.34
3922 10777 2.434134 GCAACACTACGCTCCGTCG 61.434 63.158 0.00 0.00 41.54 5.12
3924 10779 0.944311 CTTGCAACACTACGCTCCGT 60.944 55.000 0.00 0.00 44.35 4.69
3925 10780 1.781555 CTTGCAACACTACGCTCCG 59.218 57.895 0.00 0.00 0.00 4.63
3926 10781 0.951040 AGCTTGCAACACTACGCTCC 60.951 55.000 0.00 0.00 0.00 4.70
3927 10782 1.390463 GTAGCTTGCAACACTACGCTC 59.610 52.381 11.41 2.03 0.00 5.03
3928 10783 1.429463 GTAGCTTGCAACACTACGCT 58.571 50.000 15.52 14.12 0.00 5.07
3929 10784 3.949313 GTAGCTTGCAACACTACGC 57.051 52.632 15.52 8.22 0.00 4.42
3931 10786 1.993370 CTCCGTAGCTTGCAACACTAC 59.007 52.381 18.69 18.69 34.29 2.73
3932 10787 1.616865 ACTCCGTAGCTTGCAACACTA 59.383 47.619 0.00 0.00 0.00 2.74
3945 10800 2.104859 CGTCCGCTCTGACTCCGTA 61.105 63.158 0.00 0.00 32.97 4.02
4030 10904 4.435436 ATTGCCGAGCTCGACGCA 62.435 61.111 36.59 32.10 43.02 5.24
4031 10905 3.918220 CATTGCCGAGCTCGACGC 61.918 66.667 36.59 29.99 43.02 5.19
4032 10906 3.257561 CCATTGCCGAGCTCGACG 61.258 66.667 36.59 21.81 43.02 5.12
4033 10907 2.892425 CCCATTGCCGAGCTCGAC 60.892 66.667 36.59 26.91 43.02 4.20
4034 10908 4.838152 GCCCATTGCCGAGCTCGA 62.838 66.667 36.59 18.24 43.02 4.04
4064 10939 1.944024 CGCCAAACGGAAATATGCCTA 59.056 47.619 0.00 0.00 38.44 3.93
4071 10946 2.159181 CGAGTCGCCAAACGGAAAT 58.841 52.632 0.00 0.00 43.89 2.17
4083 10958 4.156622 TCGTAGCACCGCGAGTCG 62.157 66.667 8.23 8.54 38.08 4.18
4102 10977 2.314647 ACAACAACCCGCGATGTCG 61.315 57.895 8.23 1.41 43.27 4.35
4103 10978 1.206578 CACAACAACCCGCGATGTC 59.793 57.895 8.23 0.00 0.00 3.06
4112 10987 1.088306 TTGGTCGACACACAACAACC 58.912 50.000 18.91 0.00 0.00 3.77
4114 10989 0.722282 CGTTGGTCGACACACAACAA 59.278 50.000 25.56 14.81 43.38 2.83
4130 11005 0.667487 CAGCTCGTCACACCATCGTT 60.667 55.000 0.00 0.00 0.00 3.85
4133 11008 0.038251 TCACAGCTCGTCACACCATC 60.038 55.000 0.00 0.00 0.00 3.51
4160 11035 2.203153 ACCACACCACAAGCCGTC 60.203 61.111 0.00 0.00 0.00 4.79
4167 11042 1.223211 CACTGGTCACCACACCACA 59.777 57.895 0.00 0.00 41.84 4.17
4173 11048 1.157870 CCGACAACACTGGTCACCAC 61.158 60.000 0.00 0.00 34.97 4.16
4174 11049 1.145156 CCGACAACACTGGTCACCA 59.855 57.895 0.00 0.00 34.97 4.17
4176 11051 1.772063 GCACCGACAACACTGGTCAC 61.772 60.000 0.00 0.00 34.97 3.67
4178 11053 1.227556 AGCACCGACAACACTGGTC 60.228 57.895 0.00 0.00 32.48 4.02
4179 11054 1.523711 CAGCACCGACAACACTGGT 60.524 57.895 0.00 0.00 36.10 4.00
4180 11055 2.896801 GCAGCACCGACAACACTGG 61.897 63.158 0.00 0.00 0.00 4.00
4182 11057 1.451207 TTGCAGCACCGACAACACT 60.451 52.632 0.00 0.00 0.00 3.55
4183 11058 1.298339 GTTGCAGCACCGACAACAC 60.298 57.895 0.00 0.00 42.50 3.32
4184 11059 2.477176 GGTTGCAGCACCGACAACA 61.477 57.895 2.05 0.00 44.27 3.33
4185 11060 2.331451 GGTTGCAGCACCGACAAC 59.669 61.111 2.05 0.00 42.28 3.32
4191 11078 3.050275 GTCTCCGGTTGCAGCACC 61.050 66.667 0.00 0.00 0.00 5.01
4244 11131 1.506718 GTGTCTCTGGATGCGACGA 59.493 57.895 0.00 0.00 33.40 4.20
4245 11132 1.869574 CGTGTCTCTGGATGCGACG 60.870 63.158 0.00 0.00 33.40 5.12
4246 11133 0.798771 GTCGTGTCTCTGGATGCGAC 60.799 60.000 0.00 0.00 40.76 5.19
4247 11134 1.506718 GTCGTGTCTCTGGATGCGA 59.493 57.895 0.00 0.00 0.00 5.10
4248 11135 1.869574 CGTCGTGTCTCTGGATGCG 60.870 63.158 0.00 0.00 0.00 4.73
4249 11136 0.524392 CTCGTCGTGTCTCTGGATGC 60.524 60.000 0.00 0.00 0.00 3.91
4250 11137 0.524392 GCTCGTCGTGTCTCTGGATG 60.524 60.000 0.00 0.00 0.00 3.51
4251 11138 0.678366 AGCTCGTCGTGTCTCTGGAT 60.678 55.000 0.00 0.00 0.00 3.41
4252 11139 0.036671 TAGCTCGTCGTGTCTCTGGA 60.037 55.000 0.00 0.00 0.00 3.86
4253 11140 0.097325 GTAGCTCGTCGTGTCTCTGG 59.903 60.000 0.00 0.00 0.00 3.86
4254 11141 0.247340 CGTAGCTCGTCGTGTCTCTG 60.247 60.000 0.00 0.00 34.52 3.35
4255 11142 0.389556 TCGTAGCTCGTCGTGTCTCT 60.390 55.000 0.00 0.00 40.80 3.10
4256 11143 0.247223 GTCGTAGCTCGTCGTGTCTC 60.247 60.000 0.00 0.00 40.80 3.36
4257 11144 1.786582 GTCGTAGCTCGTCGTGTCT 59.213 57.895 0.00 0.00 40.80 3.41
4258 11145 1.577117 CGTCGTAGCTCGTCGTGTC 60.577 63.158 13.56 4.13 43.43 3.67
4259 11146 2.473378 CGTCGTAGCTCGTCGTGT 59.527 61.111 13.56 0.00 43.43 4.49
4260 11147 2.276493 CCGTCGTAGCTCGTCGTG 60.276 66.667 17.71 9.82 45.89 4.35
4261 11148 2.320587 AACCGTCGTAGCTCGTCGT 61.321 57.895 17.71 8.37 45.89 4.34
4262 11149 1.862147 CAACCGTCGTAGCTCGTCG 60.862 63.158 14.37 14.37 46.59 5.12
4263 11150 0.520827 CTCAACCGTCGTAGCTCGTC 60.521 60.000 0.00 0.00 40.80 4.20
4264 11151 1.500844 CTCAACCGTCGTAGCTCGT 59.499 57.895 0.00 0.00 40.80 4.18
4265 11152 1.226323 CCTCAACCGTCGTAGCTCG 60.226 63.158 0.00 0.00 41.41 5.03
4266 11153 0.179169 GACCTCAACCGTCGTAGCTC 60.179 60.000 0.00 0.00 0.00 4.09
4267 11154 0.892358 TGACCTCAACCGTCGTAGCT 60.892 55.000 0.00 0.00 32.68 3.32
4268 11155 0.456312 CTGACCTCAACCGTCGTAGC 60.456 60.000 0.00 0.00 32.68 3.58
4269 11156 0.879765 ACTGACCTCAACCGTCGTAG 59.120 55.000 0.00 0.00 32.68 3.51
4270 11157 0.594602 CACTGACCTCAACCGTCGTA 59.405 55.000 0.00 0.00 32.68 3.43
4271 11158 1.362717 CACTGACCTCAACCGTCGT 59.637 57.895 0.00 0.00 32.68 4.34
4272 11159 2.022129 GCACTGACCTCAACCGTCG 61.022 63.158 0.00 0.00 32.68 5.12
4273 11160 2.022129 CGCACTGACCTCAACCGTC 61.022 63.158 0.00 0.00 0.00 4.79
4274 11161 2.029073 CGCACTGACCTCAACCGT 59.971 61.111 0.00 0.00 0.00 4.83
4275 11162 2.738521 CCGCACTGACCTCAACCG 60.739 66.667 0.00 0.00 0.00 4.44
4276 11163 3.050275 GCCGCACTGACCTCAACC 61.050 66.667 0.00 0.00 0.00 3.77
4277 11164 3.414700 CGCCGCACTGACCTCAAC 61.415 66.667 0.00 0.00 0.00 3.18
4278 11165 2.652382 TTTCGCCGCACTGACCTCAA 62.652 55.000 0.00 0.00 0.00 3.02
4279 11166 3.158537 TTTCGCCGCACTGACCTCA 62.159 57.895 0.00 0.00 0.00 3.86
4280 11167 2.357034 TTTCGCCGCACTGACCTC 60.357 61.111 0.00 0.00 0.00 3.85
4281 11168 2.357517 CTTTCGCCGCACTGACCT 60.358 61.111 0.00 0.00 0.00 3.85
4282 11169 2.357034 TCTTTCGCCGCACTGACC 60.357 61.111 0.00 0.00 0.00 4.02
4283 11170 2.853914 GTCTTTCGCCGCACTGAC 59.146 61.111 0.00 0.00 0.00 3.51
4284 11171 2.733218 CGTCTTTCGCCGCACTGA 60.733 61.111 0.00 0.00 0.00 3.41
4285 11172 3.036084 ACGTCTTTCGCCGCACTG 61.036 61.111 0.00 0.00 44.19 3.66
4286 11173 3.036084 CACGTCTTTCGCCGCACT 61.036 61.111 0.00 0.00 44.19 4.40
4287 11174 4.719616 GCACGTCTTTCGCCGCAC 62.720 66.667 0.00 0.00 44.19 5.34
4289 11176 4.007940 TTGCACGTCTTTCGCCGC 62.008 61.111 0.00 0.00 44.19 6.53
4290 11177 2.127758 GTTGCACGTCTTTCGCCG 60.128 61.111 0.00 0.00 44.19 6.46
4291 11178 2.251371 GGTTGCACGTCTTTCGCC 59.749 61.111 0.00 0.00 44.19 5.54
4292 11179 2.127758 CGGTTGCACGTCTTTCGC 60.128 61.111 0.00 0.00 44.19 4.70
4293 11180 2.127758 GCGGTTGCACGTCTTTCG 60.128 61.111 0.00 0.00 46.00 3.46
4294 11181 2.127758 CGCGGTTGCACGTCTTTC 60.128 61.111 0.00 0.00 42.97 2.62
4295 11182 4.307908 GCGCGGTTGCACGTCTTT 62.308 61.111 8.83 0.00 42.97 2.52
4296 11183 3.851845 TAGCGCGGTTGCACGTCTT 62.852 57.895 19.09 0.00 42.97 3.01
4297 11184 4.351938 TAGCGCGGTTGCACGTCT 62.352 61.111 19.09 0.00 42.97 4.18
4298 11185 4.130281 GTAGCGCGGTTGCACGTC 62.130 66.667 19.09 0.00 42.97 4.34
4302 11189 4.053526 TACGGTAGCGCGGTTGCA 62.054 61.111 19.09 0.00 42.97 4.08
4303 11190 3.548231 GTACGGTAGCGCGGTTGC 61.548 66.667 19.09 10.24 37.91 4.17
4304 11191 1.408474 GAAGTACGGTAGCGCGGTTG 61.408 60.000 19.09 9.86 32.68 3.77
4305 11192 1.153958 GAAGTACGGTAGCGCGGTT 60.154 57.895 19.09 0.00 32.68 4.44
4306 11193 1.865788 TTGAAGTACGGTAGCGCGGT 61.866 55.000 17.70 17.70 34.85 5.68
4307 11194 1.138047 CTTGAAGTACGGTAGCGCGG 61.138 60.000 15.35 0.00 0.00 6.46
4308 11195 0.179181 TCTTGAAGTACGGTAGCGCG 60.179 55.000 15.35 0.00 0.00 6.86
4309 11196 1.852895 CATCTTGAAGTACGGTAGCGC 59.147 52.381 15.35 0.00 0.00 5.92
4310 11197 2.159282 ACCATCTTGAAGTACGGTAGCG 60.159 50.000 13.69 13.69 0.00 4.26
4311 11198 3.187700 CACCATCTTGAAGTACGGTAGC 58.812 50.000 3.40 0.00 0.00 3.58
4312 11199 3.187700 GCACCATCTTGAAGTACGGTAG 58.812 50.000 3.40 1.44 0.00 3.18
4313 11200 2.563620 TGCACCATCTTGAAGTACGGTA 59.436 45.455 3.40 0.00 0.00 4.02
4314 11201 1.346395 TGCACCATCTTGAAGTACGGT 59.654 47.619 0.00 0.00 0.00 4.83
4315 11202 2.093306 TGCACCATCTTGAAGTACGG 57.907 50.000 0.00 0.00 0.00 4.02
4316 11203 2.282555 CGATGCACCATCTTGAAGTACG 59.717 50.000 0.00 0.00 38.59 3.67
4317 11204 2.609459 CCGATGCACCATCTTGAAGTAC 59.391 50.000 0.00 0.00 38.59 2.73
4318 11205 2.236146 ACCGATGCACCATCTTGAAGTA 59.764 45.455 0.00 0.00 38.59 2.24
4319 11206 1.003580 ACCGATGCACCATCTTGAAGT 59.996 47.619 0.00 0.00 38.59 3.01
4320 11207 1.399440 CACCGATGCACCATCTTGAAG 59.601 52.381 0.00 0.00 38.59 3.02
4321 11208 1.452110 CACCGATGCACCATCTTGAA 58.548 50.000 0.00 0.00 38.59 2.69
4322 11209 0.392863 CCACCGATGCACCATCTTGA 60.393 55.000 0.00 0.00 38.59 3.02
4323 11210 1.996786 GCCACCGATGCACCATCTTG 61.997 60.000 0.00 1.54 38.59 3.02
4324 11211 1.750399 GCCACCGATGCACCATCTT 60.750 57.895 0.00 0.00 38.59 2.40
4325 11212 2.124570 GCCACCGATGCACCATCT 60.125 61.111 0.00 0.00 38.59 2.90
4326 11213 3.576356 CGCCACCGATGCACCATC 61.576 66.667 0.00 0.00 37.50 3.51
4330 11217 3.716539 TAGAGCGCCACCGATGCAC 62.717 63.158 2.29 0.00 36.29 4.57
4331 11218 3.430565 CTAGAGCGCCACCGATGCA 62.431 63.158 2.29 0.00 36.29 3.96
4332 11219 2.659897 CTAGAGCGCCACCGATGC 60.660 66.667 2.29 0.00 36.29 3.91
4333 11220 1.007964 CTCTAGAGCGCCACCGATG 60.008 63.158 6.86 0.00 36.29 3.84
4334 11221 2.196925 CCTCTAGAGCGCCACCGAT 61.197 63.158 14.73 0.00 36.29 4.18
4335 11222 2.829003 CCTCTAGAGCGCCACCGA 60.829 66.667 14.73 0.00 36.29 4.69
4336 11223 3.905678 CCCTCTAGAGCGCCACCG 61.906 72.222 14.73 0.00 37.57 4.94
4337 11224 3.541713 CCCCTCTAGAGCGCCACC 61.542 72.222 14.73 0.00 0.00 4.61
4338 11225 3.541713 CCCCCTCTAGAGCGCCAC 61.542 72.222 14.73 0.00 0.00 5.01
4352 11239 8.413309 AAATTTTACAACTAGTCTAAACCCCC 57.587 34.615 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.