Multiple sequence alignment - TraesCS5B01G084300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G084300 chr5B 100.000 3161 0 0 1 3161 106949598 106952758 0.000000e+00 5838.0
1 TraesCS5B01G084300 chr5B 95.753 2661 71 15 517 3161 105540952 105538318 0.000000e+00 4250.0
2 TraesCS5B01G084300 chr5B 100.000 1467 0 0 3456 4922 106953053 106954519 0.000000e+00 2710.0
3 TraesCS5B01G084300 chr5B 89.198 1185 76 12 1999 3161 678317260 678316106 0.000000e+00 1432.0
4 TraesCS5B01G084300 chr5B 90.153 782 27 12 3456 4204 105538244 105537480 0.000000e+00 972.0
5 TraesCS5B01G084300 chr5B 96.360 522 18 1 1 522 243096646 243096126 0.000000e+00 857.0
6 TraesCS5B01G084300 chr5B 96.532 519 16 1 1 517 309800362 309799844 0.000000e+00 857.0
7 TraesCS5B01G084300 chr5B 95.825 527 20 2 1 527 213262023 213262547 0.000000e+00 850.0
8 TraesCS5B01G084300 chr5B 96.139 518 17 3 1 516 653754961 653755477 0.000000e+00 843.0
9 TraesCS5B01G084300 chr5B 89.482 637 33 16 3456 4070 678316035 678315411 0.000000e+00 774.0
10 TraesCS5B01G084300 chr5B 89.358 545 42 9 936 1469 678318165 678317626 0.000000e+00 671.0
11 TraesCS5B01G084300 chr5B 91.818 110 7 2 4371 4478 678314971 678314862 8.530000e-33 152.0
12 TraesCS5B01G084300 chr5B 84.259 108 12 4 4202 4307 678315196 678315092 3.130000e-17 100.0
13 TraesCS5B01G084300 chr5D 95.297 2360 73 12 819 3161 97576151 97578489 0.000000e+00 3709.0
14 TraesCS5B01G084300 chr5D 87.997 1183 63 25 1994 3161 537660150 537659032 0.000000e+00 1325.0
15 TraesCS5B01G084300 chr5D 93.653 772 25 6 3456 4204 97578685 97579455 0.000000e+00 1133.0
16 TraesCS5B01G084300 chr5D 93.456 596 25 6 3456 4050 537658961 537658379 0.000000e+00 872.0
17 TraesCS5B01G084300 chr5D 90.614 554 35 8 920 1471 537661142 537660604 0.000000e+00 719.0
18 TraesCS5B01G084300 chr5D 94.681 94 3 1 713 804 97576070 97576163 1.430000e-30 145.0
19 TraesCS5B01G084300 chr5D 93.151 73 5 0 4536 4608 428386509 428386581 1.870000e-19 108.0
20 TraesCS5B01G084300 chr5D 87.931 58 7 0 4280 4337 289743798 289743741 8.840000e-08 69.4
21 TraesCS5B01G084300 chr5A 94.147 2392 78 21 787 3161 106167525 106165179 0.000000e+00 3585.0
22 TraesCS5B01G084300 chr5A 91.655 707 32 6 3456 4136 106164821 106164116 0.000000e+00 953.0
23 TraesCS5B01G084300 chr5A 91.228 57 5 0 4281 4337 367133167 367133223 1.470000e-10 78.7
24 TraesCS5B01G084300 chr4A 90.717 1185 68 18 1999 3161 631903848 631902684 0.000000e+00 1541.0
25 TraesCS5B01G084300 chr4A 87.697 1081 80 23 1808 2876 58788132 58787093 0.000000e+00 1210.0
26 TraesCS5B01G084300 chr4A 96.132 517 18 2 1 517 742418533 742418019 0.000000e+00 843.0
27 TraesCS5B01G084300 chr4A 91.100 618 29 9 3459 4072 631902611 631902016 0.000000e+00 813.0
28 TraesCS5B01G084300 chr4A 90.822 523 39 3 947 1469 631904748 631904235 0.000000e+00 691.0
29 TraesCS5B01G084300 chr4A 83.834 699 80 13 927 1611 58789132 58788453 6.950000e-178 634.0
30 TraesCS5B01G084300 chr4A 91.818 110 7 2 4371 4478 631901644 631901535 8.530000e-33 152.0
31 TraesCS5B01G084300 chr4A 87.200 125 12 3 2899 3019 58787097 58786973 6.640000e-29 139.0
32 TraesCS5B01G084300 chr4A 91.176 68 4 2 4207 4272 631901761 631901694 1.890000e-14 91.6
33 TraesCS5B01G084300 chr2B 88.840 1138 74 22 1808 2933 10727090 10728186 0.000000e+00 1349.0
34 TraesCS5B01G084300 chr2B 95.265 528 21 4 1 527 361585494 361586018 0.000000e+00 833.0
35 TraesCS5B01G084300 chr2B 88.281 512 39 8 916 1421 10726127 10726623 1.180000e-165 593.0
36 TraesCS5B01G084300 chr2B 90.588 85 7 1 530 613 419950531 419950447 1.450000e-20 111.0
37 TraesCS5B01G084300 chr2B 93.333 75 3 1 4537 4609 395535802 395535876 5.210000e-20 110.0
38 TraesCS5B01G084300 chr2B 88.060 67 4 4 4552 4616 600792585 600792521 5.280000e-10 76.8
39 TraesCS5B01G084300 chr6B 96.132 517 19 1 1 516 686994735 686995251 0.000000e+00 843.0
40 TraesCS5B01G084300 chr6B 90.244 82 6 2 4537 4616 163967922 163967841 6.740000e-19 106.0
41 TraesCS5B01G084300 chr6B 93.750 48 3 0 4286 4333 309684597 309684550 6.830000e-09 73.1
42 TraesCS5B01G084300 chr6B 93.182 44 3 0 4280 4323 672368234 672368191 1.140000e-06 65.8
43 TraesCS5B01G084300 chr4B 96.132 517 18 2 1 516 94797494 94798009 0.000000e+00 843.0
44 TraesCS5B01G084300 chr4B 91.667 156 5 2 2017 2172 191712245 191712098 4.990000e-50 209.0
45 TraesCS5B01G084300 chr4B 91.358 81 4 3 4537 4616 364668474 364668396 1.870000e-19 108.0
46 TraesCS5B01G084300 chr4B 78.378 148 28 4 4661 4807 582291827 582291683 5.250000e-15 93.5
47 TraesCS5B01G084300 chr4B 85.714 84 10 2 4655 4737 575329822 575329740 2.440000e-13 87.9
48 TraesCS5B01G084300 chr7B 95.437 526 22 2 1 525 387776684 387776160 0.000000e+00 837.0
49 TraesCS5B01G084300 chr7B 100.000 32 0 0 4505 4536 534043350 534043319 5.320000e-05 60.2
50 TraesCS5B01G084300 chr3A 87.967 241 28 1 1232 1471 115126167 115126407 2.900000e-72 283.0
51 TraesCS5B01G084300 chr3A 90.090 111 11 0 4659 4769 681060021 681060131 1.430000e-30 145.0
52 TraesCS5B01G084300 chr3A 84.685 111 17 0 4662 4772 550658538 550658648 1.450000e-20 111.0
53 TraesCS5B01G084300 chr3A 100.000 29 0 0 4508 4536 551699533 551699505 2.000000e-03 54.7
54 TraesCS5B01G084300 chr7D 85.663 279 27 10 1200 1471 366418252 366417980 1.040000e-71 281.0
55 TraesCS5B01G084300 chr7D 95.455 44 2 0 4281 4324 564142008 564141965 2.460000e-08 71.3
56 TraesCS5B01G084300 chr7D 100.000 30 0 0 4281 4310 13081702 13081731 6.880000e-04 56.5
57 TraesCS5B01G084300 chr7A 87.137 241 30 1 1232 1471 19982491 19982731 6.280000e-69 272.0
58 TraesCS5B01G084300 chr7A 90.909 99 7 1 517 613 549102939 549103037 1.110000e-26 132.0
59 TraesCS5B01G084300 chr7A 94.521 73 3 1 4537 4609 290616063 290616134 1.450000e-20 111.0
60 TraesCS5B01G084300 chr7A 91.358 81 2 5 4538 4616 153377881 153377804 6.740000e-19 106.0
61 TraesCS5B01G084300 chr1B 90.000 170 4 6 2004 2172 30503034 30503191 1.800000e-49 207.0
62 TraesCS5B01G084300 chr2A 89.744 156 5 3 2017 2172 62214736 62214592 6.500000e-44 189.0
63 TraesCS5B01G084300 chr2A 83.654 104 11 3 517 614 90213393 90213496 5.250000e-15 93.5
64 TraesCS5B01G084300 chr4D 94.444 72 4 0 4537 4608 303843482 303843553 1.450000e-20 111.0
65 TraesCS5B01G084300 chr2D 92.308 78 3 3 4537 4612 24451820 24451744 1.870000e-19 108.0
66 TraesCS5B01G084300 chr1A 92.208 77 3 2 4536 4611 250197802 250197876 6.740000e-19 106.0
67 TraesCS5B01G084300 chr3D 82.645 121 11 7 4691 4804 574292928 574293045 1.130000e-16 99.0
68 TraesCS5B01G084300 chr6A 86.420 81 7 4 4659 4737 101839981 101840059 8.780000e-13 86.1
69 TraesCS5B01G084300 chr3B 89.552 67 3 4 4552 4616 66419264 66419200 1.140000e-11 82.4
70 TraesCS5B01G084300 chr3B 78.030 132 21 8 4494 4623 341179069 341178944 5.280000e-10 76.8
71 TraesCS5B01G084300 chr3B 86.765 68 7 2 4553 4619 45277058 45276992 1.900000e-09 75.0
72 TraesCS5B01G084300 chr3B 92.308 52 2 2 4560 4609 144942350 144942401 6.830000e-09 73.1
73 TraesCS5B01G084300 chr6D 86.364 66 8 1 526 591 444512859 444512795 2.460000e-08 71.3
74 TraesCS5B01G084300 chrUn 89.130 46 3 2 4493 4536 47688172 47688217 6.880000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G084300 chr5B 106949598 106954519 4921 False 4274.000000 5838 100.000000 1 4922 2 chr5B.!!$F3 4921
1 TraesCS5B01G084300 chr5B 105537480 105540952 3472 True 2611.000000 4250 92.953000 517 4204 2 chr5B.!!$R3 3687
2 TraesCS5B01G084300 chr5B 243096126 243096646 520 True 857.000000 857 96.360000 1 522 1 chr5B.!!$R1 521
3 TraesCS5B01G084300 chr5B 309799844 309800362 518 True 857.000000 857 96.532000 1 517 1 chr5B.!!$R2 516
4 TraesCS5B01G084300 chr5B 213262023 213262547 524 False 850.000000 850 95.825000 1 527 1 chr5B.!!$F1 526
5 TraesCS5B01G084300 chr5B 653754961 653755477 516 False 843.000000 843 96.139000 1 516 1 chr5B.!!$F2 515
6 TraesCS5B01G084300 chr5B 678314862 678318165 3303 True 625.800000 1432 88.823000 936 4478 5 chr5B.!!$R4 3542
7 TraesCS5B01G084300 chr5D 97576070 97579455 3385 False 1662.333333 3709 94.543667 713 4204 3 chr5D.!!$F2 3491
8 TraesCS5B01G084300 chr5D 537658379 537661142 2763 True 972.000000 1325 90.689000 920 4050 3 chr5D.!!$R2 3130
9 TraesCS5B01G084300 chr5A 106164116 106167525 3409 True 2269.000000 3585 92.901000 787 4136 2 chr5A.!!$R1 3349
10 TraesCS5B01G084300 chr4A 742418019 742418533 514 True 843.000000 843 96.132000 1 517 1 chr4A.!!$R1 516
11 TraesCS5B01G084300 chr4A 58786973 58789132 2159 True 661.000000 1210 86.243667 927 3019 3 chr4A.!!$R2 2092
12 TraesCS5B01G084300 chr4A 631901535 631904748 3213 True 657.720000 1541 91.126600 947 4478 5 chr4A.!!$R3 3531
13 TraesCS5B01G084300 chr2B 10726127 10728186 2059 False 971.000000 1349 88.560500 916 2933 2 chr2B.!!$F3 2017
14 TraesCS5B01G084300 chr2B 361585494 361586018 524 False 833.000000 833 95.265000 1 527 1 chr2B.!!$F1 526
15 TraesCS5B01G084300 chr6B 686994735 686995251 516 False 843.000000 843 96.132000 1 516 1 chr6B.!!$F1 515
16 TraesCS5B01G084300 chr4B 94797494 94798009 515 False 843.000000 843 96.132000 1 516 1 chr4B.!!$F1 515
17 TraesCS5B01G084300 chr7B 387776160 387776684 524 True 837.000000 837 95.437000 1 525 1 chr7B.!!$R1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
608 614 1.153429 CGGAGGCCTTCCCGTAAAG 60.153 63.158 21.84 0.0 43.63 1.85 F
1248 1271 0.252239 GGGGCTTCTTCCATTTGGGT 60.252 55.000 0.00 0.0 38.11 4.51 F
2124 2465 0.178967 TGCAGAAGGTTGATGGCCAA 60.179 50.000 10.96 0.0 0.00 4.52 F
2125 2466 1.188863 GCAGAAGGTTGATGGCCAAT 58.811 50.000 10.96 0.0 37.08 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 1528 0.179032 TGACCTGACGGTGCAACAAT 60.179 50.000 0.98 0.00 45.73 2.71 R
2986 3336 3.503748 GCCACCAGCCTGCTAAATAATAG 59.496 47.826 0.00 0.00 34.35 1.73 R
3882 4339 0.250513 GATTCTTCACTCCCGCACCT 59.749 55.000 0.00 0.00 0.00 4.00 R
3952 4409 2.997303 GCGGTTCCAAAACACTGTTTTT 59.003 40.909 15.83 1.35 37.10 1.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
469 474 3.004002 CGTTGCTATGCATCACCATGATT 59.996 43.478 0.19 0.00 38.76 2.57
526 532 4.722700 CCCAACAGGAGGCACCCG 62.723 72.222 0.00 0.00 40.05 5.28
608 614 1.153429 CGGAGGCCTTCCCGTAAAG 60.153 63.158 21.84 0.00 43.63 1.85
693 699 7.885297 TCTTTTCATTTTTATCTCTGTGTGGG 58.115 34.615 0.00 0.00 0.00 4.61
694 700 5.643379 TTCATTTTTATCTCTGTGTGGGC 57.357 39.130 0.00 0.00 0.00 5.36
698 704 5.705609 TTTTTATCTCTGTGTGGGCTTTC 57.294 39.130 0.00 0.00 0.00 2.62
776 784 6.995511 TTTTCTCCGAGAAAAGAAAAGACA 57.004 33.333 25.79 7.02 45.99 3.41
1248 1271 0.252239 GGGGCTTCTTCCATTTGGGT 60.252 55.000 0.00 0.00 38.11 4.51
1267 1295 2.552155 GGTTGGTGGCTGATTGTAGTGA 60.552 50.000 0.00 0.00 0.00 3.41
1274 1302 2.924290 GGCTGATTGTAGTGAGTTCGTC 59.076 50.000 0.00 0.00 0.00 4.20
1444 1472 1.081840 GCTCAAAGGTGAACAGCGC 60.082 57.895 0.00 0.00 31.88 5.92
1487 1515 0.445436 GGTGTGCAGAATCAGCGAAG 59.555 55.000 0.00 0.00 33.85 3.79
1540 1577 5.004448 TCAATTGATTGCCATGTTTTGCAT 58.996 33.333 3.38 0.00 37.33 3.96
1562 1599 5.540400 TTGGAACTCCGGAATTACGATAT 57.460 39.130 12.83 0.00 39.43 1.63
1704 1745 2.674852 CACTCTGATCCATTGTTCGGTG 59.325 50.000 0.00 0.00 0.00 4.94
1718 1761 1.323412 TCGGTGGGATGGTTTGTTTG 58.677 50.000 0.00 0.00 0.00 2.93
1719 1762 1.036707 CGGTGGGATGGTTTGTTTGT 58.963 50.000 0.00 0.00 0.00 2.83
1720 1763 1.410882 CGGTGGGATGGTTTGTTTGTT 59.589 47.619 0.00 0.00 0.00 2.83
1721 1764 2.159028 CGGTGGGATGGTTTGTTTGTTT 60.159 45.455 0.00 0.00 0.00 2.83
1767 1822 1.191489 TCGGTCCTGTTCTGGCATGA 61.191 55.000 0.00 0.00 0.00 3.07
1828 2087 0.512518 TTGCTGAATTCGCTGTCACG 59.487 50.000 18.44 0.00 0.00 4.35
1932 2194 3.325293 AACATGAGGTGCTCAGTAGTG 57.675 47.619 0.00 0.00 44.08 2.74
1942 2204 2.825532 TGCTCAGTAGTGCTATGTGTCA 59.174 45.455 0.00 0.00 35.37 3.58
1988 2250 4.094146 GCCAAGATCTGCAAAAGACTAGAC 59.906 45.833 0.00 0.00 37.88 2.59
1991 2253 5.083533 AGATCTGCAAAAGACTAGACAGG 57.916 43.478 0.00 0.00 37.88 4.00
2012 2351 7.955918 ACAGGAAATAATTCTTTTGTTCTGCT 58.044 30.769 0.00 0.00 35.79 4.24
2124 2465 0.178967 TGCAGAAGGTTGATGGCCAA 60.179 50.000 10.96 0.00 0.00 4.52
2125 2466 1.188863 GCAGAAGGTTGATGGCCAAT 58.811 50.000 10.96 0.00 37.08 3.16
2126 2467 1.551883 GCAGAAGGTTGATGGCCAATT 59.448 47.619 10.96 0.00 37.08 2.32
2127 2468 2.675889 GCAGAAGGTTGATGGCCAATTG 60.676 50.000 10.96 0.00 37.08 2.32
2128 2469 2.093869 CAGAAGGTTGATGGCCAATTGG 60.094 50.000 20.81 20.81 37.08 3.16
2143 2484 5.850557 CCAATTGGCCATCACTGTTATTA 57.149 39.130 12.53 0.00 0.00 0.98
2439 2781 5.970612 TGTTTCGTGATTTCTGTTGACATTG 59.029 36.000 0.00 0.00 0.00 2.82
2717 3066 2.237392 GCTGTTATCTCCTGGTGTCCTT 59.763 50.000 0.00 0.00 0.00 3.36
2975 3324 2.604046 ACGCATCAGGTCTGGTATTC 57.396 50.000 0.00 0.00 0.00 1.75
2977 3327 1.414181 CGCATCAGGTCTGGTATTCCT 59.586 52.381 0.00 0.00 34.23 3.36
2982 3332 5.749462 CATCAGGTCTGGTATTCCTTTCTT 58.251 41.667 0.00 0.00 34.23 2.52
2983 3333 6.632672 GCATCAGGTCTGGTATTCCTTTCTTA 60.633 42.308 0.00 0.00 34.23 2.10
2985 3335 8.651389 CATCAGGTCTGGTATTCCTTTCTTATA 58.349 37.037 0.00 0.00 34.23 0.98
2986 3336 8.019656 TCAGGTCTGGTATTCCTTTCTTATAC 57.980 38.462 0.00 0.00 34.23 1.47
3021 3391 4.586001 AGGCTGGTGGCAGATATTTTTATG 59.414 41.667 0.00 0.00 44.01 1.90
3064 3434 5.755409 TTTCTTTACATGCCTCTCCTACA 57.245 39.130 0.00 0.00 0.00 2.74
3080 3450 7.055667 TCTCCTACAATTCATGATCACTACC 57.944 40.000 0.00 0.00 0.00 3.18
3081 3451 6.042093 TCTCCTACAATTCATGATCACTACCC 59.958 42.308 0.00 0.00 0.00 3.69
3085 3455 6.770286 ACAATTCATGATCACTACCCCTAT 57.230 37.500 0.00 0.00 0.00 2.57
3479 3922 5.353123 TCCATTGTATTAACTCGAAAGCCAC 59.647 40.000 0.00 0.00 0.00 5.01
3536 3979 3.316868 TGAACATAGCATGCATGGATGTG 59.683 43.478 27.34 18.82 31.29 3.21
3537 3980 3.217681 ACATAGCATGCATGGATGTGA 57.782 42.857 27.34 15.50 29.75 3.58
3583 4026 4.137543 CAAGTTCTTCTGCCAACCTAGTT 58.862 43.478 0.00 0.00 0.00 2.24
3869 4326 1.333619 CCCAAACTCAAACACGGTCAG 59.666 52.381 0.00 0.00 0.00 3.51
3882 4339 5.204409 ACACGGTCAGTCTAAAATGTGTA 57.796 39.130 0.00 0.00 37.53 2.90
4076 4598 8.685257 ATCATATTATCATGTACCCTCCTGAA 57.315 34.615 0.00 0.00 0.00 3.02
4115 4669 5.125097 AGCTTTCCATTTGAGATCACACATC 59.875 40.000 0.00 0.00 0.00 3.06
4144 4705 4.219070 TGCGTTTACTTCTTACTAGCCTGA 59.781 41.667 0.00 0.00 0.00 3.86
4151 4712 6.360370 ACTTCTTACTAGCCTGAAACATCA 57.640 37.500 0.00 0.00 0.00 3.07
4167 4728 4.292186 ACATCAAGCAACCTGTGACTAT 57.708 40.909 0.00 0.00 0.00 2.12
4184 4745 3.332919 ACTATGAATCGAGCATGCCATC 58.667 45.455 15.66 5.36 0.00 3.51
4200 4765 2.477863 GCCATCATACGTGTCAAAAGGC 60.478 50.000 0.00 0.00 0.00 4.35
4217 4818 3.767902 AGGCCTAGCAAGAAGATCATC 57.232 47.619 1.29 0.00 0.00 2.92
4226 4827 7.760794 CCTAGCAAGAAGATCATCTGATATCAC 59.239 40.741 0.00 0.00 34.37 3.06
4269 4872 4.410228 ACTCCATGCTCACCTAACACATAT 59.590 41.667 0.00 0.00 0.00 1.78
4272 4875 6.288294 TCCATGCTCACCTAACACATATTAC 58.712 40.000 0.00 0.00 0.00 1.89
4273 4876 5.470098 CCATGCTCACCTAACACATATTACC 59.530 44.000 0.00 0.00 0.00 2.85
4275 4878 5.914033 TGCTCACCTAACACATATTACCTC 58.086 41.667 0.00 0.00 0.00 3.85
4276 4879 5.163343 TGCTCACCTAACACATATTACCTCC 60.163 44.000 0.00 0.00 0.00 4.30
4277 4880 5.163343 GCTCACCTAACACATATTACCTCCA 60.163 44.000 0.00 0.00 0.00 3.86
4282 4885 8.375506 CACCTAACACATATTACCTCCACATAT 58.624 37.037 0.00 0.00 0.00 1.78
4290 4893 7.962003 ACATATTACCTCCACATATTACCTCCT 59.038 37.037 0.00 0.00 0.00 3.69
4292 4895 6.742559 TTACCTCCACATATTACCTCCTTC 57.257 41.667 0.00 0.00 0.00 3.46
4294 4897 3.328050 CCTCCACATATTACCTCCTTCCC 59.672 52.174 0.00 0.00 0.00 3.97
4295 4898 3.973973 CTCCACATATTACCTCCTTCCCA 59.026 47.826 0.00 0.00 0.00 4.37
4307 4910 4.354087 ACCTCCTTCCCAAATTACTTGTCT 59.646 41.667 0.00 0.00 32.65 3.41
4308 4911 5.162980 ACCTCCTTCCCAAATTACTTGTCTT 60.163 40.000 0.00 0.00 32.65 3.01
4310 4913 6.374613 CCTCCTTCCCAAATTACTTGTCTTAC 59.625 42.308 0.00 0.00 32.65 2.34
4312 4915 7.466804 TCCTTCCCAAATTACTTGTCTTACAT 58.533 34.615 0.00 0.00 32.65 2.29
4313 4916 7.947890 TCCTTCCCAAATTACTTGTCTTACATT 59.052 33.333 0.00 0.00 32.65 2.71
4319 4945 9.965824 CCAAATTACTTGTCTTACATTTGTCTT 57.034 29.630 0.00 0.00 32.65 3.01
4326 4952 6.961359 TGTCTTACATTTGTCTTGATACGG 57.039 37.500 0.00 0.00 0.00 4.02
4327 4953 6.693466 TGTCTTACATTTGTCTTGATACGGA 58.307 36.000 0.00 0.00 0.00 4.69
4328 4954 7.327975 TGTCTTACATTTGTCTTGATACGGAT 58.672 34.615 0.00 0.00 0.00 4.18
4329 4955 7.277760 TGTCTTACATTTGTCTTGATACGGATG 59.722 37.037 0.00 0.00 0.00 3.51
4331 4957 8.471609 TCTTACATTTGTCTTGATACGGATGTA 58.528 33.333 0.00 0.00 32.86 2.29
4359 4985 5.538877 AGATAAGTTATTCAGGACAGGGGA 58.461 41.667 0.00 0.00 0.00 4.81
4360 4986 5.604650 AGATAAGTTATTCAGGACAGGGGAG 59.395 44.000 0.00 0.00 0.00 4.30
4361 4987 3.491766 AGTTATTCAGGACAGGGGAGA 57.508 47.619 0.00 0.00 0.00 3.71
4362 4988 3.108376 AGTTATTCAGGACAGGGGAGAC 58.892 50.000 0.00 0.00 0.00 3.36
4365 4991 0.545309 TTCAGGACAGGGGAGACAGG 60.545 60.000 0.00 0.00 0.00 4.00
4366 4992 1.992277 CAGGACAGGGGAGACAGGG 60.992 68.421 0.00 0.00 0.00 4.45
4368 4994 1.687493 GGACAGGGGAGACAGGGAG 60.687 68.421 0.00 0.00 0.00 4.30
4369 4995 1.079438 GACAGGGGAGACAGGGAGT 59.921 63.158 0.00 0.00 0.00 3.85
4403 5066 6.597280 GCACAAAAATATCTGTCTTCTCTCCT 59.403 38.462 0.00 0.00 0.00 3.69
4409 5072 4.591321 ATCTGTCTTCTCTCCTCTCTGT 57.409 45.455 0.00 0.00 0.00 3.41
4447 5110 9.971922 CATCTCTGTACACAAGTGAATATCATA 57.028 33.333 7.28 0.00 0.00 2.15
4501 5164 8.007821 CATGGATGCTACGTTACTATTACTTG 57.992 38.462 0.00 0.00 0.00 3.16
4502 5165 5.981315 TGGATGCTACGTTACTATTACTTGC 59.019 40.000 0.00 0.00 0.00 4.01
4503 5166 5.981315 GGATGCTACGTTACTATTACTTGCA 59.019 40.000 0.00 0.00 0.00 4.08
4504 5167 6.477688 GGATGCTACGTTACTATTACTTGCAA 59.522 38.462 0.00 0.00 0.00 4.08
4505 5168 7.170998 GGATGCTACGTTACTATTACTTGCAAT 59.829 37.037 0.00 0.00 0.00 3.56
4506 5169 9.188588 GATGCTACGTTACTATTACTTGCAATA 57.811 33.333 0.00 0.00 0.00 1.90
4507 5170 9.706691 ATGCTACGTTACTATTACTTGCAATAT 57.293 29.630 0.00 0.00 0.00 1.28
4517 5180 9.988815 ACTATTACTTGCAATATACTTCCTCTG 57.011 33.333 0.00 0.00 0.00 3.35
4518 5181 9.988815 CTATTACTTGCAATATACTTCCTCTGT 57.011 33.333 0.00 0.00 0.00 3.41
4520 5183 9.686683 ATTACTTGCAATATACTTCCTCTGTTT 57.313 29.630 0.00 0.00 0.00 2.83
4521 5184 7.617041 ACTTGCAATATACTTCCTCTGTTTC 57.383 36.000 0.00 0.00 0.00 2.78
4522 5185 7.398024 ACTTGCAATATACTTCCTCTGTTTCT 58.602 34.615 0.00 0.00 0.00 2.52
4523 5186 8.540388 ACTTGCAATATACTTCCTCTGTTTCTA 58.460 33.333 0.00 0.00 0.00 2.10
4524 5187 9.383519 CTTGCAATATACTTCCTCTGTTTCTAA 57.616 33.333 0.00 0.00 0.00 2.10
4525 5188 9.733556 TTGCAATATACTTCCTCTGTTTCTAAA 57.266 29.630 0.00 0.00 0.00 1.85
4526 5189 9.905713 TGCAATATACTTCCTCTGTTTCTAAAT 57.094 29.630 0.00 0.00 0.00 1.40
4555 5218 8.697507 AATCTTCCAAAATAAGTGTCTCAACT 57.302 30.769 0.00 0.00 0.00 3.16
4556 5219 7.730364 TCTTCCAAAATAAGTGTCTCAACTC 57.270 36.000 0.00 0.00 0.00 3.01
4557 5220 7.509546 TCTTCCAAAATAAGTGTCTCAACTCT 58.490 34.615 0.00 0.00 0.00 3.24
4558 5221 8.647796 TCTTCCAAAATAAGTGTCTCAACTCTA 58.352 33.333 0.00 0.00 0.00 2.43
4559 5222 8.833231 TTCCAAAATAAGTGTCTCAACTCTAG 57.167 34.615 0.00 0.00 0.00 2.43
4560 5223 7.963532 TCCAAAATAAGTGTCTCAACTCTAGT 58.036 34.615 0.00 0.00 0.00 2.57
4561 5224 9.085645 TCCAAAATAAGTGTCTCAACTCTAGTA 57.914 33.333 0.00 0.00 0.00 1.82
4562 5225 9.141400 CCAAAATAAGTGTCTCAACTCTAGTAC 57.859 37.037 0.00 0.00 0.00 2.73
4563 5226 9.692749 CAAAATAAGTGTCTCAACTCTAGTACA 57.307 33.333 0.00 0.00 0.00 2.90
4565 5228 9.915629 AAATAAGTGTCTCAACTCTAGTACAAG 57.084 33.333 0.00 0.00 0.00 3.16
4566 5229 6.963083 AAGTGTCTCAACTCTAGTACAAGT 57.037 37.500 0.00 0.00 0.00 3.16
4567 5230 6.963083 AGTGTCTCAACTCTAGTACAAGTT 57.037 37.500 0.00 0.00 36.16 2.66
4568 5231 8.461249 AAGTGTCTCAACTCTAGTACAAGTTA 57.539 34.615 7.67 0.00 34.05 2.24
4569 5232 8.101654 AGTGTCTCAACTCTAGTACAAGTTAG 57.898 38.462 7.67 6.84 34.05 2.34
4570 5233 7.720515 AGTGTCTCAACTCTAGTACAAGTTAGT 59.279 37.037 7.67 0.00 34.05 2.24
4571 5234 8.997323 GTGTCTCAACTCTAGTACAAGTTAGTA 58.003 37.037 7.67 0.00 34.05 1.82
4572 5235 8.997323 TGTCTCAACTCTAGTACAAGTTAGTAC 58.003 37.037 7.67 0.00 43.61 2.73
4573 5236 8.997323 GTCTCAACTCTAGTACAAGTTAGTACA 58.003 37.037 14.14 4.38 45.25 2.90
4574 5237 9.565090 TCTCAACTCTAGTACAAGTTAGTACAA 57.435 33.333 14.14 0.00 45.25 2.41
4577 5240 9.962783 CAACTCTAGTACAAGTTAGTACAAAGT 57.037 33.333 14.14 11.44 45.25 2.66
4579 5242 9.962783 ACTCTAGTACAAGTTAGTACAAAGTTG 57.037 33.333 14.14 3.28 45.25 3.16
4583 5246 8.868635 AGTACAAGTTAGTACAAAGTTGAGAC 57.131 34.615 10.30 7.92 45.25 3.36
4584 5247 8.472413 AGTACAAGTTAGTACAAAGTTGAGACA 58.528 33.333 10.30 0.00 45.25 3.41
4585 5248 7.535489 ACAAGTTAGTACAAAGTTGAGACAC 57.465 36.000 10.30 0.00 40.66 3.67
4586 5249 7.328737 ACAAGTTAGTACAAAGTTGAGACACT 58.671 34.615 10.30 0.00 40.66 3.55
4587 5250 7.822822 ACAAGTTAGTACAAAGTTGAGACACTT 59.177 33.333 10.30 0.98 40.66 3.16
4588 5251 9.309516 CAAGTTAGTACAAAGTTGAGACACTTA 57.690 33.333 0.00 0.00 40.66 2.24
4594 5257 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4595 5258 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4596 5259 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4597 5260 7.287696 ACAAAGTTGAGACACTTATTTTGGGAT 59.712 33.333 0.00 0.00 35.87 3.85
4598 5261 6.824305 AGTTGAGACACTTATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
4599 5262 5.711976 AGTTGAGACACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 0.00 3.51
4600 5263 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
4601 5264 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
4602 5265 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
4603 5266 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
4604 5267 3.596046 ACACTTATTTTGGGATGGAGGGA 59.404 43.478 0.00 0.00 0.00 4.20
4605 5268 4.210331 CACTTATTTTGGGATGGAGGGAG 58.790 47.826 0.00 0.00 0.00 4.30
4606 5269 3.858638 ACTTATTTTGGGATGGAGGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
4607 5270 5.043762 ACTTATTTTGGGATGGAGGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
4608 5271 5.676811 ACTTATTTTGGGATGGAGGGAGTAT 59.323 40.000 0.00 0.00 0.00 2.12
4609 5272 3.951563 TTTTGGGATGGAGGGAGTATG 57.048 47.619 0.00 0.00 0.00 2.39
4610 5273 2.587060 TTGGGATGGAGGGAGTATGT 57.413 50.000 0.00 0.00 0.00 2.29
4611 5274 3.717507 TTGGGATGGAGGGAGTATGTA 57.282 47.619 0.00 0.00 0.00 2.29
4612 5275 2.972348 TGGGATGGAGGGAGTATGTAC 58.028 52.381 0.00 0.00 0.00 2.90
4613 5276 2.522705 TGGGATGGAGGGAGTATGTACT 59.477 50.000 0.00 0.00 39.71 2.73
4614 5277 3.051341 TGGGATGGAGGGAGTATGTACTT 60.051 47.826 0.00 0.00 36.50 2.24
4615 5278 3.974642 GGGATGGAGGGAGTATGTACTTT 59.025 47.826 0.00 0.00 36.50 2.66
4616 5279 4.040584 GGGATGGAGGGAGTATGTACTTTC 59.959 50.000 0.00 0.00 36.50 2.62
4617 5280 4.040584 GGATGGAGGGAGTATGTACTTTCC 59.959 50.000 0.00 10.13 36.50 3.13
4618 5281 4.069312 TGGAGGGAGTATGTACTTTCCA 57.931 45.455 13.43 13.43 38.30 3.53
4619 5282 4.631234 TGGAGGGAGTATGTACTTTCCAT 58.369 43.478 13.43 2.98 37.03 3.41
4620 5283 5.036916 TGGAGGGAGTATGTACTTTCCATT 58.963 41.667 13.43 0.00 37.03 3.16
4621 5284 5.104527 TGGAGGGAGTATGTACTTTCCATTG 60.105 44.000 13.43 0.00 37.03 2.82
4622 5285 4.781934 AGGGAGTATGTACTTTCCATTGC 58.218 43.478 12.69 0.00 36.50 3.56
4623 5286 3.883489 GGGAGTATGTACTTTCCATTGCC 59.117 47.826 0.00 0.00 36.50 4.52
4624 5287 4.385310 GGGAGTATGTACTTTCCATTGCCT 60.385 45.833 0.00 0.00 36.50 4.75
4625 5288 4.576463 GGAGTATGTACTTTCCATTGCCTG 59.424 45.833 0.00 0.00 36.50 4.85
4626 5289 5.179452 AGTATGTACTTTCCATTGCCTGT 57.821 39.130 0.00 0.00 31.13 4.00
4627 5290 6.308015 AGTATGTACTTTCCATTGCCTGTA 57.692 37.500 0.00 0.00 31.13 2.74
4628 5291 6.113411 AGTATGTACTTTCCATTGCCTGTAC 58.887 40.000 0.00 0.00 31.13 2.90
4629 5292 4.634012 TGTACTTTCCATTGCCTGTACT 57.366 40.909 0.00 0.00 33.59 2.73
4630 5293 4.575885 TGTACTTTCCATTGCCTGTACTC 58.424 43.478 0.00 0.00 33.59 2.59
4631 5294 4.286032 TGTACTTTCCATTGCCTGTACTCT 59.714 41.667 0.00 0.00 33.59 3.24
4632 5295 5.482526 TGTACTTTCCATTGCCTGTACTCTA 59.517 40.000 0.00 0.00 33.59 2.43
4633 5296 5.499004 ACTTTCCATTGCCTGTACTCTAA 57.501 39.130 0.00 0.00 0.00 2.10
4634 5297 5.876357 ACTTTCCATTGCCTGTACTCTAAA 58.124 37.500 0.00 0.00 0.00 1.85
4635 5298 6.303839 ACTTTCCATTGCCTGTACTCTAAAA 58.696 36.000 0.00 0.00 0.00 1.52
4636 5299 6.948309 ACTTTCCATTGCCTGTACTCTAAAAT 59.052 34.615 0.00 0.00 0.00 1.82
4637 5300 7.451566 ACTTTCCATTGCCTGTACTCTAAAATT 59.548 33.333 0.00 0.00 0.00 1.82
4638 5301 6.757897 TCCATTGCCTGTACTCTAAAATTG 57.242 37.500 0.00 0.00 0.00 2.32
4639 5302 5.125417 TCCATTGCCTGTACTCTAAAATTGC 59.875 40.000 0.00 0.00 0.00 3.56
4640 5303 5.105797 CCATTGCCTGTACTCTAAAATTGCA 60.106 40.000 0.00 0.00 0.00 4.08
4641 5304 6.406177 CCATTGCCTGTACTCTAAAATTGCAT 60.406 38.462 0.00 0.00 0.00 3.96
4642 5305 5.565592 TGCCTGTACTCTAAAATTGCATG 57.434 39.130 0.00 0.00 0.00 4.06
4643 5306 5.009631 TGCCTGTACTCTAAAATTGCATGT 58.990 37.500 0.00 0.00 0.00 3.21
4644 5307 5.106197 TGCCTGTACTCTAAAATTGCATGTG 60.106 40.000 0.00 0.00 0.00 3.21
4645 5308 5.106157 GCCTGTACTCTAAAATTGCATGTGT 60.106 40.000 0.00 0.00 0.00 3.72
4646 5309 6.093495 GCCTGTACTCTAAAATTGCATGTGTA 59.907 38.462 0.00 0.00 0.00 2.90
4647 5310 7.677276 GCCTGTACTCTAAAATTGCATGTGTAG 60.677 40.741 0.00 0.00 0.00 2.74
4648 5311 7.201644 CCTGTACTCTAAAATTGCATGTGTAGG 60.202 40.741 0.00 0.00 0.00 3.18
4649 5312 6.597672 TGTACTCTAAAATTGCATGTGTAGGG 59.402 38.462 0.00 0.00 0.00 3.53
4650 5313 5.570320 ACTCTAAAATTGCATGTGTAGGGT 58.430 37.500 0.00 0.00 0.00 4.34
4651 5314 5.415701 ACTCTAAAATTGCATGTGTAGGGTG 59.584 40.000 0.13 0.00 0.00 4.61
4652 5315 5.321102 TCTAAAATTGCATGTGTAGGGTGT 58.679 37.500 0.00 0.00 0.00 4.16
4653 5316 4.953940 AAAATTGCATGTGTAGGGTGTT 57.046 36.364 0.00 0.00 0.00 3.32
4654 5317 6.943146 TCTAAAATTGCATGTGTAGGGTGTTA 59.057 34.615 0.00 0.00 0.00 2.41
4655 5318 6.603940 AAAATTGCATGTGTAGGGTGTTAT 57.396 33.333 0.00 0.00 0.00 1.89
4656 5319 5.581126 AATTGCATGTGTAGGGTGTTATG 57.419 39.130 0.00 0.00 0.00 1.90
4657 5320 3.712016 TGCATGTGTAGGGTGTTATGT 57.288 42.857 0.00 0.00 0.00 2.29
4658 5321 3.342719 TGCATGTGTAGGGTGTTATGTG 58.657 45.455 0.00 0.00 0.00 3.21
4659 5322 3.008485 TGCATGTGTAGGGTGTTATGTGA 59.992 43.478 0.00 0.00 0.00 3.58
4660 5323 3.374058 GCATGTGTAGGGTGTTATGTGAC 59.626 47.826 0.00 0.00 0.00 3.67
4661 5324 3.306917 TGTGTAGGGTGTTATGTGACG 57.693 47.619 0.00 0.00 0.00 4.35
4662 5325 2.892215 TGTGTAGGGTGTTATGTGACGA 59.108 45.455 0.00 0.00 0.00 4.20
4663 5326 3.057104 TGTGTAGGGTGTTATGTGACGAG 60.057 47.826 0.00 0.00 0.00 4.18
4664 5327 3.192001 GTGTAGGGTGTTATGTGACGAGA 59.808 47.826 0.00 0.00 0.00 4.04
4665 5328 3.442625 TGTAGGGTGTTATGTGACGAGAG 59.557 47.826 0.00 0.00 0.00 3.20
4666 5329 1.204941 AGGGTGTTATGTGACGAGAGC 59.795 52.381 0.00 0.00 0.00 4.09
4667 5330 1.269166 GGTGTTATGTGACGAGAGCG 58.731 55.000 0.00 0.00 44.79 5.03
4668 5331 1.269166 GTGTTATGTGACGAGAGCGG 58.731 55.000 0.00 0.00 43.17 5.52
4675 5338 4.117661 GACGAGAGCGGCCGTTCT 62.118 66.667 39.93 39.93 40.51 3.01
4676 5339 4.421479 ACGAGAGCGGCCGTTCTG 62.421 66.667 43.39 33.87 43.17 3.02
4678 5341 3.760035 GAGAGCGGCCGTTCTGGA 61.760 66.667 43.39 0.00 42.00 3.86
4679 5342 3.991536 GAGAGCGGCCGTTCTGGAC 62.992 68.421 43.39 27.52 45.45 4.02
4701 5364 4.827087 CGGCAGCTGGACGCAGAT 62.827 66.667 17.12 0.00 43.96 2.90
4702 5365 2.501128 GGCAGCTGGACGCAGATA 59.499 61.111 17.12 0.00 42.61 1.98
4703 5366 1.070445 GGCAGCTGGACGCAGATAT 59.930 57.895 17.12 0.00 42.61 1.63
4704 5367 0.948141 GGCAGCTGGACGCAGATATC 60.948 60.000 17.12 0.00 42.61 1.63
4705 5368 0.948141 GCAGCTGGACGCAGATATCC 60.948 60.000 17.12 0.00 42.61 2.59
4706 5369 0.390492 CAGCTGGACGCAGATATCCA 59.610 55.000 5.57 0.00 42.88 3.41
4709 5372 1.748403 TGGACGCAGATATCCAGCC 59.252 57.895 11.02 2.48 40.17 4.85
4710 5373 1.373497 GGACGCAGATATCCAGCCG 60.373 63.158 11.02 9.07 34.87 5.52
4711 5374 2.024319 GACGCAGATATCCAGCCGC 61.024 63.158 11.02 1.59 0.00 6.53
4712 5375 2.740055 CGCAGATATCCAGCCGCC 60.740 66.667 11.02 0.00 0.00 6.13
4713 5376 2.359230 GCAGATATCCAGCCGCCC 60.359 66.667 0.00 0.00 0.00 6.13
4714 5377 2.047844 CAGATATCCAGCCGCCCG 60.048 66.667 0.00 0.00 0.00 6.13
4715 5378 4.008933 AGATATCCAGCCGCCCGC 62.009 66.667 0.00 0.00 37.98 6.13
4737 5400 2.512286 CCGAGGTGATGCGTGCAT 60.512 61.111 7.12 7.12 39.69 3.96
4738 5401 1.227234 CCGAGGTGATGCGTGCATA 60.227 57.895 7.42 0.00 36.70 3.14
4739 5402 1.217585 CCGAGGTGATGCGTGCATAG 61.218 60.000 7.42 0.00 36.70 2.23
4740 5403 0.249031 CGAGGTGATGCGTGCATAGA 60.249 55.000 7.42 0.00 36.70 1.98
4741 5404 1.802508 CGAGGTGATGCGTGCATAGAA 60.803 52.381 7.42 0.00 36.70 2.10
4742 5405 2.487934 GAGGTGATGCGTGCATAGAAT 58.512 47.619 7.42 0.00 36.70 2.40
4743 5406 3.653344 GAGGTGATGCGTGCATAGAATA 58.347 45.455 7.42 0.00 36.70 1.75
4744 5407 3.657634 AGGTGATGCGTGCATAGAATAG 58.342 45.455 7.42 0.00 36.70 1.73
4745 5408 2.738846 GGTGATGCGTGCATAGAATAGG 59.261 50.000 7.42 0.00 36.70 2.57
4746 5409 3.393800 GTGATGCGTGCATAGAATAGGT 58.606 45.455 7.42 0.00 36.70 3.08
4747 5410 3.185188 GTGATGCGTGCATAGAATAGGTG 59.815 47.826 7.42 0.00 36.70 4.00
4748 5411 2.238942 TGCGTGCATAGAATAGGTGG 57.761 50.000 0.00 0.00 0.00 4.61
4749 5412 1.202639 TGCGTGCATAGAATAGGTGGG 60.203 52.381 0.00 0.00 0.00 4.61
4750 5413 1.070134 GCGTGCATAGAATAGGTGGGA 59.930 52.381 0.00 0.00 0.00 4.37
4751 5414 2.484770 GCGTGCATAGAATAGGTGGGAA 60.485 50.000 0.00 0.00 0.00 3.97
4752 5415 3.804036 CGTGCATAGAATAGGTGGGAAA 58.196 45.455 0.00 0.00 0.00 3.13
4753 5416 4.196193 CGTGCATAGAATAGGTGGGAAAA 58.804 43.478 0.00 0.00 0.00 2.29
4754 5417 4.821805 CGTGCATAGAATAGGTGGGAAAAT 59.178 41.667 0.00 0.00 0.00 1.82
4755 5418 5.049405 CGTGCATAGAATAGGTGGGAAAATC 60.049 44.000 0.00 0.00 0.00 2.17
4756 5419 5.827797 GTGCATAGAATAGGTGGGAAAATCA 59.172 40.000 0.00 0.00 0.00 2.57
4757 5420 5.827797 TGCATAGAATAGGTGGGAAAATCAC 59.172 40.000 0.00 0.00 34.61 3.06
4758 5421 5.827797 GCATAGAATAGGTGGGAAAATCACA 59.172 40.000 0.00 0.00 36.90 3.58
4759 5422 6.321181 GCATAGAATAGGTGGGAAAATCACAA 59.679 38.462 0.00 0.00 36.90 3.33
4760 5423 7.014615 GCATAGAATAGGTGGGAAAATCACAAT 59.985 37.037 0.00 0.00 36.90 2.71
4761 5424 8.571336 CATAGAATAGGTGGGAAAATCACAATC 58.429 37.037 0.00 0.00 36.90 2.67
4762 5425 5.590259 AGAATAGGTGGGAAAATCACAATCG 59.410 40.000 0.00 0.00 36.90 3.34
4763 5426 3.433306 AGGTGGGAAAATCACAATCGA 57.567 42.857 0.00 0.00 36.90 3.59
4764 5427 3.968265 AGGTGGGAAAATCACAATCGAT 58.032 40.909 0.00 0.00 36.90 3.59
4765 5428 3.696051 AGGTGGGAAAATCACAATCGATG 59.304 43.478 0.00 0.00 36.90 3.84
4766 5429 3.438360 GTGGGAAAATCACAATCGATGC 58.562 45.455 0.00 0.00 27.62 3.91
4767 5430 3.087781 TGGGAAAATCACAATCGATGCA 58.912 40.909 0.00 0.00 0.00 3.96
4768 5431 3.700539 TGGGAAAATCACAATCGATGCAT 59.299 39.130 0.00 0.00 0.00 3.96
4769 5432 4.886489 TGGGAAAATCACAATCGATGCATA 59.114 37.500 0.00 0.00 0.00 3.14
4770 5433 5.215160 GGGAAAATCACAATCGATGCATAC 58.785 41.667 0.00 0.00 0.00 2.39
4771 5434 5.221028 GGGAAAATCACAATCGATGCATACA 60.221 40.000 0.00 0.00 0.00 2.29
4772 5435 6.441274 GGAAAATCACAATCGATGCATACAT 58.559 36.000 0.00 0.00 39.98 2.29
4773 5436 6.919662 GGAAAATCACAATCGATGCATACATT 59.080 34.615 0.00 0.00 36.35 2.71
4774 5437 8.075574 GGAAAATCACAATCGATGCATACATTA 58.924 33.333 0.00 0.00 36.35 1.90
4775 5438 9.110617 GAAAATCACAATCGATGCATACATTAG 57.889 33.333 0.00 0.00 36.35 1.73
4776 5439 5.596268 TCACAATCGATGCATACATTAGC 57.404 39.130 0.00 0.00 36.35 3.09
4777 5440 4.452114 TCACAATCGATGCATACATTAGCC 59.548 41.667 0.00 0.00 36.35 3.93
4778 5441 3.433274 ACAATCGATGCATACATTAGCCG 59.567 43.478 0.00 0.00 36.35 5.52
4779 5442 2.812358 TCGATGCATACATTAGCCGT 57.188 45.000 0.00 0.00 36.35 5.68
4780 5443 3.926821 TCGATGCATACATTAGCCGTA 57.073 42.857 0.00 0.00 36.35 4.02
4781 5444 4.450082 TCGATGCATACATTAGCCGTAT 57.550 40.909 0.00 0.00 36.35 3.06
4782 5445 5.570234 TCGATGCATACATTAGCCGTATA 57.430 39.130 0.00 0.00 36.35 1.47
4783 5446 5.337554 TCGATGCATACATTAGCCGTATAC 58.662 41.667 0.00 0.00 36.35 1.47
4784 5447 5.099575 CGATGCATACATTAGCCGTATACA 58.900 41.667 0.00 0.00 36.35 2.29
4785 5448 5.575218 CGATGCATACATTAGCCGTATACAA 59.425 40.000 0.00 0.00 36.35 2.41
4786 5449 6.255670 CGATGCATACATTAGCCGTATACAAT 59.744 38.462 0.00 0.00 36.35 2.71
4787 5450 6.961359 TGCATACATTAGCCGTATACAATC 57.039 37.500 3.32 0.00 0.00 2.67
4788 5451 6.459923 TGCATACATTAGCCGTATACAATCA 58.540 36.000 3.32 0.00 0.00 2.57
4789 5452 6.931840 TGCATACATTAGCCGTATACAATCAA 59.068 34.615 3.32 0.00 0.00 2.57
4790 5453 7.606073 TGCATACATTAGCCGTATACAATCAAT 59.394 33.333 3.32 0.00 0.00 2.57
4791 5454 9.093970 GCATACATTAGCCGTATACAATCAATA 57.906 33.333 3.32 0.00 0.00 1.90
4795 5458 9.635520 ACATTAGCCGTATACAATCAATACTAC 57.364 33.333 3.32 0.00 0.00 2.73
4796 5459 9.856488 CATTAGCCGTATACAATCAATACTACT 57.144 33.333 3.32 0.00 0.00 2.57
4797 5460 9.856488 ATTAGCCGTATACAATCAATACTACTG 57.144 33.333 3.32 0.00 0.00 2.74
4798 5461 6.688578 AGCCGTATACAATCAATACTACTGG 58.311 40.000 3.32 0.00 0.00 4.00
4799 5462 5.347907 GCCGTATACAATCAATACTACTGGC 59.652 44.000 3.32 0.00 30.63 4.85
4800 5463 5.867716 CCGTATACAATCAATACTACTGGCC 59.132 44.000 3.32 0.00 0.00 5.36
4801 5464 6.452242 CGTATACAATCAATACTACTGGCCA 58.548 40.000 4.71 4.71 0.00 5.36
4802 5465 6.365247 CGTATACAATCAATACTACTGGCCAC 59.635 42.308 0.00 0.00 0.00 5.01
4803 5466 3.531538 ACAATCAATACTACTGGCCACG 58.468 45.455 0.00 0.00 0.00 4.94
4804 5467 2.240493 ATCAATACTACTGGCCACGC 57.760 50.000 0.00 0.00 0.00 5.34
4805 5468 1.191535 TCAATACTACTGGCCACGCT 58.808 50.000 0.00 0.00 0.00 5.07
4806 5469 1.134818 TCAATACTACTGGCCACGCTG 60.135 52.381 0.00 0.00 0.00 5.18
4807 5470 1.134818 CAATACTACTGGCCACGCTGA 60.135 52.381 0.00 0.00 0.00 4.26
4808 5471 0.460311 ATACTACTGGCCACGCTGAC 59.540 55.000 0.00 0.00 0.00 3.51
4809 5472 0.896479 TACTACTGGCCACGCTGACA 60.896 55.000 0.00 0.00 0.00 3.58
4810 5473 1.738099 CTACTGGCCACGCTGACAC 60.738 63.158 0.00 0.00 0.00 3.67
4811 5474 2.434658 CTACTGGCCACGCTGACACA 62.435 60.000 0.00 0.00 0.00 3.72
4812 5475 2.034048 TACTGGCCACGCTGACACAA 62.034 55.000 0.00 0.00 0.00 3.33
4813 5476 2.591429 TGGCCACGCTGACACAAG 60.591 61.111 0.00 0.00 0.00 3.16
4814 5477 3.357079 GGCCACGCTGACACAAGG 61.357 66.667 0.00 0.00 0.00 3.61
4815 5478 2.280797 GCCACGCTGACACAAGGA 60.281 61.111 0.00 0.00 0.00 3.36
4816 5479 2.607892 GCCACGCTGACACAAGGAC 61.608 63.158 0.00 0.00 0.00 3.85
4817 5480 1.961277 CCACGCTGACACAAGGACC 60.961 63.158 0.00 0.00 0.00 4.46
4818 5481 1.227527 CACGCTGACACAAGGACCA 60.228 57.895 0.00 0.00 0.00 4.02
4819 5482 1.069765 ACGCTGACACAAGGACCAG 59.930 57.895 0.00 0.00 0.00 4.00
4820 5483 2.320587 CGCTGACACAAGGACCAGC 61.321 63.158 0.00 0.00 46.05 4.85
4822 5485 2.621763 CTGACACAAGGACCAGCAC 58.378 57.895 0.00 0.00 0.00 4.40
4823 5486 0.886490 CTGACACAAGGACCAGCACC 60.886 60.000 0.00 0.00 0.00 5.01
4824 5487 1.961277 GACACAAGGACCAGCACCG 60.961 63.158 0.00 0.00 0.00 4.94
4825 5488 3.357079 CACAAGGACCAGCACCGC 61.357 66.667 0.00 0.00 0.00 5.68
4826 5489 3.872603 ACAAGGACCAGCACCGCA 61.873 61.111 0.00 0.00 0.00 5.69
4827 5490 3.052082 CAAGGACCAGCACCGCAG 61.052 66.667 0.00 0.00 0.00 5.18
4846 5509 3.766432 GCACGGTGGCCCTTTTTA 58.234 55.556 10.60 0.00 0.00 1.52
4847 5510 1.287815 GCACGGTGGCCCTTTTTAC 59.712 57.895 10.60 0.00 0.00 2.01
4848 5511 1.176619 GCACGGTGGCCCTTTTTACT 61.177 55.000 10.60 0.00 0.00 2.24
4849 5512 1.883209 GCACGGTGGCCCTTTTTACTA 60.883 52.381 10.60 0.00 0.00 1.82
4850 5513 1.808343 CACGGTGGCCCTTTTTACTAC 59.192 52.381 0.00 0.00 0.00 2.73
4851 5514 1.701292 ACGGTGGCCCTTTTTACTACT 59.299 47.619 0.00 0.00 0.00 2.57
4852 5515 2.081462 CGGTGGCCCTTTTTACTACTG 58.919 52.381 0.00 0.00 0.00 2.74
4853 5516 2.551504 CGGTGGCCCTTTTTACTACTGT 60.552 50.000 0.00 0.00 0.00 3.55
4854 5517 3.493334 GGTGGCCCTTTTTACTACTGTT 58.507 45.455 0.00 0.00 0.00 3.16
4855 5518 3.893200 GGTGGCCCTTTTTACTACTGTTT 59.107 43.478 0.00 0.00 0.00 2.83
4856 5519 4.022589 GGTGGCCCTTTTTACTACTGTTTC 60.023 45.833 0.00 0.00 0.00 2.78
4857 5520 4.581409 GTGGCCCTTTTTACTACTGTTTCA 59.419 41.667 0.00 0.00 0.00 2.69
4858 5521 5.243060 GTGGCCCTTTTTACTACTGTTTCAT 59.757 40.000 0.00 0.00 0.00 2.57
4859 5522 5.475564 TGGCCCTTTTTACTACTGTTTCATC 59.524 40.000 0.00 0.00 0.00 2.92
4860 5523 5.710567 GGCCCTTTTTACTACTGTTTCATCT 59.289 40.000 0.00 0.00 0.00 2.90
4861 5524 6.882678 GGCCCTTTTTACTACTGTTTCATCTA 59.117 38.462 0.00 0.00 0.00 1.98
4862 5525 7.148289 GGCCCTTTTTACTACTGTTTCATCTAC 60.148 40.741 0.00 0.00 0.00 2.59
4863 5526 7.412672 GCCCTTTTTACTACTGTTTCATCTACG 60.413 40.741 0.00 0.00 0.00 3.51
4864 5527 7.064253 CCCTTTTTACTACTGTTTCATCTACGG 59.936 40.741 0.00 0.00 0.00 4.02
4865 5528 6.956299 TTTTACTACTGTTTCATCTACGGC 57.044 37.500 0.00 0.00 0.00 5.68
4866 5529 3.146618 ACTACTGTTTCATCTACGGCG 57.853 47.619 4.80 4.80 0.00 6.46
4867 5530 2.490903 ACTACTGTTTCATCTACGGCGT 59.509 45.455 19.64 19.64 0.00 5.68
4868 5531 1.992170 ACTGTTTCATCTACGGCGTC 58.008 50.000 19.21 0.00 0.00 5.19
4869 5532 1.271379 ACTGTTTCATCTACGGCGTCA 59.729 47.619 19.21 4.58 0.00 4.35
4870 5533 2.094182 ACTGTTTCATCTACGGCGTCAT 60.094 45.455 19.21 7.27 0.00 3.06
4871 5534 2.930040 CTGTTTCATCTACGGCGTCATT 59.070 45.455 19.21 0.00 0.00 2.57
4872 5535 2.670905 TGTTTCATCTACGGCGTCATTG 59.329 45.455 19.21 12.74 0.00 2.82
4873 5536 1.934589 TTCATCTACGGCGTCATTGG 58.065 50.000 19.21 3.85 0.00 3.16
4874 5537 0.104120 TCATCTACGGCGTCATTGGG 59.896 55.000 19.21 2.63 0.00 4.12
4875 5538 0.880278 CATCTACGGCGTCATTGGGG 60.880 60.000 19.21 0.00 0.00 4.96
4876 5539 2.660258 ATCTACGGCGTCATTGGGGC 62.660 60.000 19.21 0.00 0.00 5.80
4877 5540 3.385749 CTACGGCGTCATTGGGGCT 62.386 63.158 19.21 0.00 0.00 5.19
4878 5541 3.379865 TACGGCGTCATTGGGGCTC 62.380 63.158 19.21 0.00 0.00 4.70
4882 5545 3.197790 CGTCATTGGGGCTCGCTG 61.198 66.667 0.00 0.00 0.00 5.18
4883 5546 2.045926 GTCATTGGGGCTCGCTGT 60.046 61.111 0.00 0.00 0.00 4.40
4884 5547 1.220749 GTCATTGGGGCTCGCTGTA 59.779 57.895 0.00 0.00 0.00 2.74
4885 5548 0.392461 GTCATTGGGGCTCGCTGTAA 60.392 55.000 0.00 0.00 0.00 2.41
4886 5549 0.546122 TCATTGGGGCTCGCTGTAAT 59.454 50.000 0.00 0.00 0.00 1.89
4887 5550 1.064758 TCATTGGGGCTCGCTGTAATT 60.065 47.619 0.00 0.00 0.00 1.40
4888 5551 2.171659 TCATTGGGGCTCGCTGTAATTA 59.828 45.455 0.00 0.00 0.00 1.40
4889 5552 2.791347 TTGGGGCTCGCTGTAATTAA 57.209 45.000 0.00 0.00 0.00 1.40
4890 5553 3.290948 TTGGGGCTCGCTGTAATTAAT 57.709 42.857 0.00 0.00 0.00 1.40
4891 5554 3.290948 TGGGGCTCGCTGTAATTAATT 57.709 42.857 5.89 5.89 0.00 1.40
4892 5555 2.948979 TGGGGCTCGCTGTAATTAATTG 59.051 45.455 11.05 0.00 0.00 2.32
4893 5556 2.949644 GGGGCTCGCTGTAATTAATTGT 59.050 45.455 11.05 0.00 0.00 2.71
4894 5557 3.243068 GGGGCTCGCTGTAATTAATTGTG 60.243 47.826 11.05 1.47 0.00 3.33
4895 5558 3.377172 GGGCTCGCTGTAATTAATTGTGT 59.623 43.478 11.05 0.00 0.00 3.72
4896 5559 4.342772 GGCTCGCTGTAATTAATTGTGTG 58.657 43.478 11.05 7.36 0.00 3.82
4897 5560 4.142687 GGCTCGCTGTAATTAATTGTGTGT 60.143 41.667 11.05 0.00 0.00 3.72
4898 5561 5.064198 GGCTCGCTGTAATTAATTGTGTGTA 59.936 40.000 11.05 0.00 0.00 2.90
4899 5562 5.957796 GCTCGCTGTAATTAATTGTGTGTAC 59.042 40.000 11.05 0.60 0.00 2.90
4900 5563 6.085121 TCGCTGTAATTAATTGTGTGTACG 57.915 37.500 11.05 5.86 0.00 3.67
4901 5564 5.062433 TCGCTGTAATTAATTGTGTGTACGG 59.938 40.000 11.05 6.05 0.00 4.02
4902 5565 5.025826 GCTGTAATTAATTGTGTGTACGGC 58.974 41.667 11.05 11.79 36.87 5.68
4903 5566 5.163794 GCTGTAATTAATTGTGTGTACGGCT 60.164 40.000 17.39 0.00 39.59 5.52
4904 5567 6.171932 TGTAATTAATTGTGTGTACGGCTG 57.828 37.500 11.05 0.00 0.00 4.85
4905 5568 3.757745 ATTAATTGTGTGTACGGCTGC 57.242 42.857 0.00 0.00 0.00 5.25
4906 5569 2.171341 TAATTGTGTGTACGGCTGCA 57.829 45.000 0.50 0.00 0.00 4.41
4907 5570 0.591170 AATTGTGTGTACGGCTGCAC 59.409 50.000 0.50 0.00 36.26 4.57
4908 5571 1.234615 ATTGTGTGTACGGCTGCACC 61.235 55.000 0.50 0.00 34.94 5.01
4918 5581 4.643387 GCTGCACCGGTGGGACTT 62.643 66.667 34.58 0.00 36.97 3.01
4919 5582 2.113139 CTGCACCGGTGGGACTTT 59.887 61.111 34.58 0.00 36.97 2.66
4920 5583 2.203280 TGCACCGGTGGGACTTTG 60.203 61.111 34.58 8.47 36.97 2.77
4921 5584 2.983592 GCACCGGTGGGACTTTGG 60.984 66.667 34.58 7.61 36.97 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.695606 GTGCGCCTGGAGGAGTCA 61.696 66.667 4.18 0.00 37.33 3.41
60 61 1.340502 ATAAAGGAGGGAGGGGGAGA 58.659 55.000 0.00 0.00 0.00 3.71
104 107 2.794910 ACGAAGATCAACTTGTGTGTCG 59.205 45.455 0.00 0.00 39.13 4.35
254 259 0.686441 CAGGGTGTCGGGGATGAGTA 60.686 60.000 0.00 0.00 0.00 2.59
346 351 2.051256 CACGATCCGACCGATCCG 60.051 66.667 0.00 0.00 44.07 4.18
426 431 1.056660 GAGGGGAGAGTGTTGTCCAA 58.943 55.000 0.00 0.00 38.50 3.53
469 474 1.231221 AATTCCTACGCACACGCAAA 58.769 45.000 0.00 0.00 45.53 3.68
596 602 4.234574 GCAATGTTTTCTTTACGGGAAGG 58.765 43.478 0.00 0.00 0.00 3.46
608 614 3.942539 AAAAAGTGGCGCAATGTTTTC 57.057 38.095 10.83 0.00 0.00 2.29
678 684 4.640771 AGAAAGCCCACACAGAGATAAA 57.359 40.909 0.00 0.00 0.00 1.40
704 710 5.189736 ACAGCCCACACATAGATTCTTCTAA 59.810 40.000 0.00 0.00 37.97 2.10
705 711 4.716784 ACAGCCCACACATAGATTCTTCTA 59.283 41.667 0.00 0.00 38.79 2.10
776 784 3.119637 GCTTGTACCAAACTGTGTGTGTT 60.120 43.478 0.00 0.00 0.00 3.32
1248 1271 2.371841 ACTCACTACAATCAGCCACCAA 59.628 45.455 0.00 0.00 0.00 3.67
1267 1295 4.003788 CCTGCCCACGGACGAACT 62.004 66.667 0.00 0.00 0.00 3.01
1274 1302 4.760047 CTTCGTCCCTGCCCACGG 62.760 72.222 0.00 0.00 36.64 4.94
1444 1472 4.023450 TCAAGCAGAAACAAGATGAGCAAG 60.023 41.667 0.00 0.00 0.00 4.01
1487 1515 2.550606 TGCAACAATAGTCACCCGAAAC 59.449 45.455 0.00 0.00 0.00 2.78
1500 1528 0.179032 TGACCTGACGGTGCAACAAT 60.179 50.000 0.98 0.00 45.73 2.71
1540 1577 3.899052 ATCGTAATTCCGGAGTTCCAA 57.101 42.857 16.35 3.02 35.14 3.53
1562 1599 3.118038 ACACAACCTCTGCCTGAACTAAA 60.118 43.478 0.00 0.00 0.00 1.85
1615 1652 6.270156 TGCAATGAACAATGAAGCAGATTA 57.730 33.333 0.00 0.00 0.00 1.75
1704 1745 5.008514 CCAATTGAAACAAACAAACCATCCC 59.991 40.000 7.12 0.00 0.00 3.85
1718 1761 6.266168 TGATCCACATACACCAATTGAAAC 57.734 37.500 7.12 0.00 0.00 2.78
1719 1762 6.627731 GCATGATCCACATACACCAATTGAAA 60.628 38.462 7.12 0.00 37.46 2.69
1720 1763 5.163530 GCATGATCCACATACACCAATTGAA 60.164 40.000 7.12 0.00 37.46 2.69
1721 1764 4.338964 GCATGATCCACATACACCAATTGA 59.661 41.667 7.12 0.00 37.46 2.57
1767 1822 8.800370 ATAAAACCACCTTTGTCAAAACAATT 57.200 26.923 0.00 0.00 44.59 2.32
1828 2087 6.350103 AGAGCTAATAAGGTTTGCTTACTCC 58.650 40.000 0.00 0.00 33.83 3.85
1932 2194 2.807967 TGTGAAGCTTGTGACACATAGC 59.192 45.455 23.72 23.72 38.14 2.97
1988 2250 8.084073 TGAGCAGAACAAAAGAATTATTTCCTG 58.916 33.333 0.00 5.88 31.84 3.86
2004 2343 3.306225 GGCCATCAATTTTGAGCAGAACA 60.306 43.478 0.00 0.00 41.08 3.18
2012 2351 4.970711 ACAACAATGGCCATCAATTTTGA 58.029 34.783 21.08 0.00 42.14 2.69
2124 2465 7.844493 ATGATTAATAACAGTGATGGCCAAT 57.156 32.000 10.96 0.00 0.00 3.16
2125 2466 7.777440 TGTATGATTAATAACAGTGATGGCCAA 59.223 33.333 10.96 0.00 0.00 4.52
2126 2467 7.286313 TGTATGATTAATAACAGTGATGGCCA 58.714 34.615 8.56 8.56 0.00 5.36
2127 2468 7.445402 ACTGTATGATTAATAACAGTGATGGCC 59.555 37.037 21.17 0.00 34.54 5.36
2128 2469 8.285394 CACTGTATGATTAATAACAGTGATGGC 58.715 37.037 31.21 4.59 43.95 4.40
2129 2470 9.330063 ACACTGTATGATTAATAACAGTGATGG 57.670 33.333 35.84 23.32 43.95 3.51
2143 2484 6.712095 TCAGAAGCAAAAGACACTGTATGATT 59.288 34.615 0.00 0.00 0.00 2.57
2189 2531 7.920151 CGTGATTCCTAAAAATAATGGCATCAA 59.080 33.333 0.00 0.00 34.93 2.57
2439 2781 6.531594 GCAAAAACACTTGATATTAGAAGGGC 59.468 38.462 0.00 0.00 0.00 5.19
2736 3085 4.201990 GCTGACCTGCCAAAAGATGAATAG 60.202 45.833 0.00 0.00 0.00 1.73
2958 3307 3.567478 AAGGAATACCAGACCTGATGC 57.433 47.619 0.00 0.00 38.94 3.91
2982 3332 7.620880 CCACCAGCCTGCTAAATAATAGTATA 58.379 38.462 0.00 0.00 0.00 1.47
2983 3333 6.476378 CCACCAGCCTGCTAAATAATAGTAT 58.524 40.000 0.00 0.00 0.00 2.12
2985 3335 4.718961 CCACCAGCCTGCTAAATAATAGT 58.281 43.478 0.00 0.00 0.00 2.12
2986 3336 3.503748 GCCACCAGCCTGCTAAATAATAG 59.496 47.826 0.00 0.00 34.35 1.73
3021 3391 6.701400 AGAAAACACAAATTATCAGCCACAAC 59.299 34.615 0.00 0.00 0.00 3.32
3064 3434 7.000472 CACAATAGGGGTAGTGATCATGAATT 59.000 38.462 0.00 0.00 33.99 2.17
3455 3832 5.353123 GTGGCTTTCGAGTTAATACAATGGA 59.647 40.000 0.00 0.00 0.00 3.41
3456 3833 5.448632 GGTGGCTTTCGAGTTAATACAATGG 60.449 44.000 0.00 0.00 0.00 3.16
3457 3834 5.448632 GGGTGGCTTTCGAGTTAATACAATG 60.449 44.000 0.00 0.00 0.00 2.82
3458 3835 4.638865 GGGTGGCTTTCGAGTTAATACAAT 59.361 41.667 0.00 0.00 0.00 2.71
3459 3836 4.004982 GGGTGGCTTTCGAGTTAATACAA 58.995 43.478 0.00 0.00 0.00 2.41
3460 3837 3.008157 TGGGTGGCTTTCGAGTTAATACA 59.992 43.478 0.00 0.00 0.00 2.29
3461 3838 3.602483 TGGGTGGCTTTCGAGTTAATAC 58.398 45.455 0.00 0.00 0.00 1.89
3464 3907 2.039216 TCATGGGTGGCTTTCGAGTTAA 59.961 45.455 0.00 0.00 0.00 2.01
3471 3914 1.067354 CAGCTTTCATGGGTGGCTTTC 60.067 52.381 0.00 0.00 0.00 2.62
3479 3922 7.587037 TTAATTCTTATCCAGCTTTCATGGG 57.413 36.000 0.00 0.00 38.44 4.00
3536 3979 7.010023 GCATAAAACGATCATTCTAACGGATC 58.990 38.462 0.00 0.00 35.28 3.36
3537 3980 6.481976 TGCATAAAACGATCATTCTAACGGAT 59.518 34.615 0.00 0.00 0.00 4.18
3583 4026 6.662865 TTATCTTGCCAAAATGAACCAAGA 57.337 33.333 4.15 4.15 43.94 3.02
3869 4326 2.676342 CCCGCACCTACACATTTTAGAC 59.324 50.000 0.00 0.00 0.00 2.59
3882 4339 0.250513 GATTCTTCACTCCCGCACCT 59.749 55.000 0.00 0.00 0.00 4.00
3952 4409 2.997303 GCGGTTCCAAAACACTGTTTTT 59.003 40.909 15.83 1.35 37.10 1.94
4076 4598 3.181466 GGAAAGCTCACACCCATGTTTTT 60.181 43.478 0.00 0.00 36.72 1.94
4115 4669 6.237595 GCTAGTAAGAAGTAAACGCACATCAG 60.238 42.308 0.00 0.00 0.00 2.90
4124 4678 7.958053 TGTTTCAGGCTAGTAAGAAGTAAAC 57.042 36.000 0.00 0.00 0.00 2.01
4144 4705 3.290710 AGTCACAGGTTGCTTGATGTTT 58.709 40.909 0.00 0.00 0.00 2.83
4151 4712 3.935203 CGATTCATAGTCACAGGTTGCTT 59.065 43.478 0.00 0.00 0.00 3.91
4167 4728 2.265589 ATGATGGCATGCTCGATTCA 57.734 45.000 18.92 13.22 32.31 2.57
4184 4745 2.351726 GCTAGGCCTTTTGACACGTATG 59.648 50.000 12.58 0.00 0.00 2.39
4200 4765 7.760794 GTGATATCAGATGATCTTCTTGCTAGG 59.239 40.741 5.42 0.00 36.05 3.02
4269 4872 5.605488 GGAAGGAGGTAATATGTGGAGGTAA 59.395 44.000 0.00 0.00 0.00 2.85
4272 4875 3.328050 GGGAAGGAGGTAATATGTGGAGG 59.672 52.174 0.00 0.00 0.00 4.30
4273 4876 3.973973 TGGGAAGGAGGTAATATGTGGAG 59.026 47.826 0.00 0.00 0.00 3.86
4275 4878 4.788925 TTGGGAAGGAGGTAATATGTGG 57.211 45.455 0.00 0.00 0.00 4.17
4276 4879 7.998964 AGTAATTTGGGAAGGAGGTAATATGTG 59.001 37.037 0.00 0.00 0.00 3.21
4277 4880 8.114301 AGTAATTTGGGAAGGAGGTAATATGT 57.886 34.615 0.00 0.00 0.00 2.29
4282 4885 6.045106 AGACAAGTAATTTGGGAAGGAGGTAA 59.955 38.462 0.00 0.00 41.25 2.85
4284 4887 4.354087 AGACAAGTAATTTGGGAAGGAGGT 59.646 41.667 0.00 0.00 41.25 3.85
4290 4893 8.919145 ACAAATGTAAGACAAGTAATTTGGGAA 58.081 29.630 9.85 0.00 41.25 3.97
4292 4895 8.576442 AGACAAATGTAAGACAAGTAATTTGGG 58.424 33.333 9.85 0.00 41.25 4.12
4333 4959 7.794683 TCCCCTGTCCTGAATAACTTATCTTAT 59.205 37.037 0.00 0.00 0.00 1.73
4334 4960 7.136885 TCCCCTGTCCTGAATAACTTATCTTA 58.863 38.462 0.00 0.00 0.00 2.10
4335 4961 5.970640 TCCCCTGTCCTGAATAACTTATCTT 59.029 40.000 0.00 0.00 0.00 2.40
4339 4965 4.715297 GTCTCCCCTGTCCTGAATAACTTA 59.285 45.833 0.00 0.00 0.00 2.24
4344 4970 2.626950 CCTGTCTCCCCTGTCCTGAATA 60.627 54.545 0.00 0.00 0.00 1.75
4349 4975 2.174876 CTCCCTGTCTCCCCTGTCCT 62.175 65.000 0.00 0.00 0.00 3.85
4351 4977 0.335361 TACTCCCTGTCTCCCCTGTC 59.665 60.000 0.00 0.00 0.00 3.51
4354 4980 0.041386 GTGTACTCCCTGTCTCCCCT 59.959 60.000 0.00 0.00 0.00 4.79
4356 4982 0.896226 GTGTGTACTCCCTGTCTCCC 59.104 60.000 0.00 0.00 0.00 4.30
4359 4985 1.633774 CCTGTGTGTACTCCCTGTCT 58.366 55.000 0.00 0.00 0.00 3.41
4360 4986 0.037232 GCCTGTGTGTACTCCCTGTC 60.037 60.000 0.00 0.00 0.00 3.51
4361 4987 0.762842 TGCCTGTGTGTACTCCCTGT 60.763 55.000 0.00 0.00 0.00 4.00
4362 4988 0.320771 GTGCCTGTGTGTACTCCCTG 60.321 60.000 0.00 0.00 0.00 4.45
4365 4991 1.961793 TTTGTGCCTGTGTGTACTCC 58.038 50.000 0.00 0.00 0.00 3.85
4366 4992 4.568152 ATTTTTGTGCCTGTGTGTACTC 57.432 40.909 0.00 0.00 0.00 2.59
4368 4994 6.086222 CAGATATTTTTGTGCCTGTGTGTAC 58.914 40.000 0.00 0.00 0.00 2.90
4369 4995 5.767665 ACAGATATTTTTGTGCCTGTGTGTA 59.232 36.000 0.00 0.00 34.08 2.90
4403 5066 9.152327 ACAGAGATGGATAAATGAATACAGAGA 57.848 33.333 0.00 0.00 0.00 3.10
4447 5110 5.049129 GCTGCTGTGTTCTTCTCTTGTTTAT 60.049 40.000 0.00 0.00 0.00 1.40
4449 5112 3.065925 GCTGCTGTGTTCTTCTCTTGTTT 59.934 43.478 0.00 0.00 0.00 2.83
4467 5130 4.925576 GCATCCATGCGCTGCTGC 62.926 66.667 9.73 5.34 44.67 5.25
4476 5139 7.359264 GCAAGTAATAGTAACGTAGCATCCATG 60.359 40.741 0.00 0.00 0.00 3.66
4477 5140 6.645415 GCAAGTAATAGTAACGTAGCATCCAT 59.355 38.462 0.00 0.00 0.00 3.41
4478 5141 5.981315 GCAAGTAATAGTAACGTAGCATCCA 59.019 40.000 0.00 0.00 0.00 3.41
4479 5142 5.981315 TGCAAGTAATAGTAACGTAGCATCC 59.019 40.000 0.00 0.00 0.00 3.51
4480 5143 7.459394 TTGCAAGTAATAGTAACGTAGCATC 57.541 36.000 0.00 0.00 0.00 3.91
4481 5144 9.706691 ATATTGCAAGTAATAGTAACGTAGCAT 57.293 29.630 4.94 0.00 0.00 3.79
4491 5154 9.988815 CAGAGGAAGTATATTGCAAGTAATAGT 57.011 33.333 4.94 3.29 0.00 2.12
4492 5155 9.988815 ACAGAGGAAGTATATTGCAAGTAATAG 57.011 33.333 4.94 0.00 0.00 1.73
4494 5157 9.686683 AAACAGAGGAAGTATATTGCAAGTAAT 57.313 29.630 4.94 1.07 0.00 1.89
4495 5158 9.162764 GAAACAGAGGAAGTATATTGCAAGTAA 57.837 33.333 4.94 0.00 0.00 2.24
4496 5159 8.540388 AGAAACAGAGGAAGTATATTGCAAGTA 58.460 33.333 4.94 0.00 0.00 2.24
4497 5160 7.398024 AGAAACAGAGGAAGTATATTGCAAGT 58.602 34.615 4.94 0.00 0.00 3.16
4498 5161 7.856145 AGAAACAGAGGAAGTATATTGCAAG 57.144 36.000 4.94 0.00 0.00 4.01
4499 5162 9.733556 TTTAGAAACAGAGGAAGTATATTGCAA 57.266 29.630 0.00 0.00 0.00 4.08
4500 5163 9.905713 ATTTAGAAACAGAGGAAGTATATTGCA 57.094 29.630 0.00 0.00 0.00 4.08
4529 5192 9.136323 AGTTGAGACACTTATTTTGGAAGATTT 57.864 29.630 0.00 0.00 0.00 2.17
4530 5193 8.697507 AGTTGAGACACTTATTTTGGAAGATT 57.302 30.769 0.00 0.00 0.00 2.40
4531 5194 8.160106 AGAGTTGAGACACTTATTTTGGAAGAT 58.840 33.333 0.00 0.00 0.00 2.40
4532 5195 7.509546 AGAGTTGAGACACTTATTTTGGAAGA 58.490 34.615 0.00 0.00 0.00 2.87
4533 5196 7.736447 AGAGTTGAGACACTTATTTTGGAAG 57.264 36.000 0.00 0.00 0.00 3.46
4534 5197 8.429641 ACTAGAGTTGAGACACTTATTTTGGAA 58.570 33.333 0.00 0.00 0.00 3.53
4535 5198 7.963532 ACTAGAGTTGAGACACTTATTTTGGA 58.036 34.615 0.00 0.00 0.00 3.53
4536 5199 9.141400 GTACTAGAGTTGAGACACTTATTTTGG 57.859 37.037 0.00 0.00 0.00 3.28
4537 5200 9.692749 TGTACTAGAGTTGAGACACTTATTTTG 57.307 33.333 0.00 0.00 0.00 2.44
4539 5202 9.915629 CTTGTACTAGAGTTGAGACACTTATTT 57.084 33.333 0.00 0.00 0.00 1.40
4540 5203 9.080097 ACTTGTACTAGAGTTGAGACACTTATT 57.920 33.333 11.43 0.00 0.00 1.40
4541 5204 8.638629 ACTTGTACTAGAGTTGAGACACTTAT 57.361 34.615 11.43 0.00 0.00 1.73
4542 5205 8.461249 AACTTGTACTAGAGTTGAGACACTTA 57.539 34.615 11.43 0.00 34.96 2.24
4543 5206 6.963083 ACTTGTACTAGAGTTGAGACACTT 57.037 37.500 11.43 0.00 0.00 3.16
4544 5207 6.963083 AACTTGTACTAGAGTTGAGACACT 57.037 37.500 11.43 0.00 34.96 3.55
4545 5208 7.873910 ACTAACTTGTACTAGAGTTGAGACAC 58.126 38.462 11.43 0.00 36.79 3.67
4546 5209 8.997323 GTACTAACTTGTACTAGAGTTGAGACA 58.003 37.037 11.43 0.00 39.55 3.41
4547 5210 8.997323 TGTACTAACTTGTACTAGAGTTGAGAC 58.003 37.037 11.43 9.51 42.22 3.36
4548 5211 9.565090 TTGTACTAACTTGTACTAGAGTTGAGA 57.435 33.333 11.43 0.00 42.22 3.27
4551 5214 9.962783 ACTTTGTACTAACTTGTACTAGAGTTG 57.037 33.333 11.43 7.80 42.22 3.16
4553 5216 9.962783 CAACTTTGTACTAACTTGTACTAGAGT 57.037 33.333 11.43 7.49 42.22 3.24
4557 5220 9.956720 GTCTCAACTTTGTACTAACTTGTACTA 57.043 33.333 6.41 0.00 42.22 1.82
4558 5221 8.472413 TGTCTCAACTTTGTACTAACTTGTACT 58.528 33.333 6.41 0.00 42.22 2.73
4559 5222 8.538039 GTGTCTCAACTTTGTACTAACTTGTAC 58.462 37.037 8.43 0.00 42.10 2.90
4560 5223 8.472413 AGTGTCTCAACTTTGTACTAACTTGTA 58.528 33.333 8.43 0.00 0.00 2.41
4561 5224 7.328737 AGTGTCTCAACTTTGTACTAACTTGT 58.671 34.615 8.43 0.00 0.00 3.16
4562 5225 7.772332 AGTGTCTCAACTTTGTACTAACTTG 57.228 36.000 0.00 0.00 0.00 3.16
4568 5231 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4569 5232 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4570 5233 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4571 5234 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4572 5235 7.038154 TCCCAAAATAAGTGTCTCAACTTTG 57.962 36.000 0.00 0.00 40.77 2.77
4573 5236 7.255942 CCATCCCAAAATAAGTGTCTCAACTTT 60.256 37.037 0.00 0.00 40.77 2.66
4574 5237 6.209391 CCATCCCAAAATAAGTGTCTCAACTT 59.791 38.462 0.00 0.00 42.89 2.66
4575 5238 5.711976 CCATCCCAAAATAAGTGTCTCAACT 59.288 40.000 0.00 0.00 0.00 3.16
4576 5239 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
4577 5240 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
4578 5241 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
4579 5242 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
4580 5243 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
4581 5244 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
4582 5245 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
4583 5246 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
4584 5247 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
4585 5248 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
4586 5249 5.435041 ACATACTCCCTCCATCCCAAAATAA 59.565 40.000 0.00 0.00 0.00 1.40
4587 5250 4.981647 ACATACTCCCTCCATCCCAAAATA 59.018 41.667 0.00 0.00 0.00 1.40
4588 5251 3.793827 ACATACTCCCTCCATCCCAAAAT 59.206 43.478 0.00 0.00 0.00 1.82
4589 5252 3.197983 ACATACTCCCTCCATCCCAAAA 58.802 45.455 0.00 0.00 0.00 2.44
4590 5253 2.858644 ACATACTCCCTCCATCCCAAA 58.141 47.619 0.00 0.00 0.00 3.28
4591 5254 2.587060 ACATACTCCCTCCATCCCAA 57.413 50.000 0.00 0.00 0.00 4.12
4592 5255 2.522705 AGTACATACTCCCTCCATCCCA 59.477 50.000 0.00 0.00 0.00 4.37
4593 5256 3.261818 AGTACATACTCCCTCCATCCC 57.738 52.381 0.00 0.00 0.00 3.85
4594 5257 4.040584 GGAAAGTACATACTCCCTCCATCC 59.959 50.000 0.00 0.00 34.99 3.51
4595 5258 4.654262 TGGAAAGTACATACTCCCTCCATC 59.346 45.833 10.99 0.00 35.91 3.51
4596 5259 4.631234 TGGAAAGTACATACTCCCTCCAT 58.369 43.478 10.99 0.00 35.91 3.41
4597 5260 4.069312 TGGAAAGTACATACTCCCTCCA 57.931 45.455 10.99 10.99 37.24 3.86
4598 5261 5.368989 CAATGGAAAGTACATACTCCCTCC 58.631 45.833 0.00 8.78 34.99 4.30
4599 5262 4.816925 GCAATGGAAAGTACATACTCCCTC 59.183 45.833 0.00 1.69 34.99 4.30
4600 5263 4.385310 GGCAATGGAAAGTACATACTCCCT 60.385 45.833 0.00 0.00 34.99 4.20
4601 5264 3.883489 GGCAATGGAAAGTACATACTCCC 59.117 47.826 0.00 0.00 34.99 4.30
4602 5265 4.576463 CAGGCAATGGAAAGTACATACTCC 59.424 45.833 0.00 0.00 34.99 3.85
4603 5266 5.186198 ACAGGCAATGGAAAGTACATACTC 58.814 41.667 0.00 0.00 34.99 2.59
4604 5267 5.179452 ACAGGCAATGGAAAGTACATACT 57.821 39.130 0.00 0.00 38.39 2.12
4605 5268 6.113411 AGTACAGGCAATGGAAAGTACATAC 58.887 40.000 0.00 0.00 35.51 2.39
4606 5269 6.156256 AGAGTACAGGCAATGGAAAGTACATA 59.844 38.462 0.00 0.00 35.51 2.29
4607 5270 5.045578 AGAGTACAGGCAATGGAAAGTACAT 60.046 40.000 0.00 0.00 35.51 2.29
4608 5271 4.286032 AGAGTACAGGCAATGGAAAGTACA 59.714 41.667 0.00 0.00 35.51 2.90
4609 5272 4.833390 AGAGTACAGGCAATGGAAAGTAC 58.167 43.478 0.00 0.00 33.80 2.73
4610 5273 6.614694 TTAGAGTACAGGCAATGGAAAGTA 57.385 37.500 0.00 0.00 0.00 2.24
4611 5274 5.499004 TTAGAGTACAGGCAATGGAAAGT 57.501 39.130 0.00 0.00 0.00 2.66
4612 5275 6.817765 TTTTAGAGTACAGGCAATGGAAAG 57.182 37.500 0.00 0.00 0.00 2.62
4613 5276 7.601856 CAATTTTAGAGTACAGGCAATGGAAA 58.398 34.615 0.00 0.00 0.00 3.13
4614 5277 6.350110 GCAATTTTAGAGTACAGGCAATGGAA 60.350 38.462 0.00 0.00 0.00 3.53
4615 5278 5.125417 GCAATTTTAGAGTACAGGCAATGGA 59.875 40.000 0.00 0.00 0.00 3.41
4616 5279 5.105797 TGCAATTTTAGAGTACAGGCAATGG 60.106 40.000 0.00 0.00 0.00 3.16
4617 5280 5.953183 TGCAATTTTAGAGTACAGGCAATG 58.047 37.500 0.00 0.00 0.00 2.82
4618 5281 6.153340 ACATGCAATTTTAGAGTACAGGCAAT 59.847 34.615 0.00 0.00 32.00 3.56
4619 5282 5.476599 ACATGCAATTTTAGAGTACAGGCAA 59.523 36.000 0.00 0.00 32.00 4.52
4620 5283 5.009631 ACATGCAATTTTAGAGTACAGGCA 58.990 37.500 0.00 0.00 0.00 4.75
4621 5284 5.106157 ACACATGCAATTTTAGAGTACAGGC 60.106 40.000 0.00 0.00 0.00 4.85
4622 5285 6.500684 ACACATGCAATTTTAGAGTACAGG 57.499 37.500 0.00 0.00 0.00 4.00
4623 5286 7.201644 CCCTACACATGCAATTTTAGAGTACAG 60.202 40.741 0.00 0.00 0.00 2.74
4624 5287 6.597672 CCCTACACATGCAATTTTAGAGTACA 59.402 38.462 0.00 0.00 0.00 2.90
4625 5288 6.598064 ACCCTACACATGCAATTTTAGAGTAC 59.402 38.462 0.00 0.00 0.00 2.73
4626 5289 6.597672 CACCCTACACATGCAATTTTAGAGTA 59.402 38.462 0.00 0.00 0.00 2.59
4627 5290 5.415701 CACCCTACACATGCAATTTTAGAGT 59.584 40.000 0.00 0.00 0.00 3.24
4628 5291 5.415701 ACACCCTACACATGCAATTTTAGAG 59.584 40.000 0.00 0.00 0.00 2.43
4629 5292 5.321102 ACACCCTACACATGCAATTTTAGA 58.679 37.500 0.00 0.00 0.00 2.10
4630 5293 5.643379 ACACCCTACACATGCAATTTTAG 57.357 39.130 0.00 0.00 0.00 1.85
4631 5294 7.177568 ACATAACACCCTACACATGCAATTTTA 59.822 33.333 0.00 0.00 0.00 1.52
4632 5295 4.953940 AACACCCTACACATGCAATTTT 57.046 36.364 0.00 0.00 0.00 1.82
4633 5296 5.480073 ACATAACACCCTACACATGCAATTT 59.520 36.000 0.00 0.00 0.00 1.82
4634 5297 5.016173 ACATAACACCCTACACATGCAATT 58.984 37.500 0.00 0.00 0.00 2.32
4635 5298 4.398988 CACATAACACCCTACACATGCAAT 59.601 41.667 0.00 0.00 0.00 3.56
4636 5299 3.755905 CACATAACACCCTACACATGCAA 59.244 43.478 0.00 0.00 0.00 4.08
4637 5300 3.008485 TCACATAACACCCTACACATGCA 59.992 43.478 0.00 0.00 0.00 3.96
4638 5301 3.374058 GTCACATAACACCCTACACATGC 59.626 47.826 0.00 0.00 0.00 4.06
4639 5302 3.616821 CGTCACATAACACCCTACACATG 59.383 47.826 0.00 0.00 0.00 3.21
4640 5303 3.512329 TCGTCACATAACACCCTACACAT 59.488 43.478 0.00 0.00 0.00 3.21
4641 5304 2.892215 TCGTCACATAACACCCTACACA 59.108 45.455 0.00 0.00 0.00 3.72
4642 5305 3.192001 TCTCGTCACATAACACCCTACAC 59.808 47.826 0.00 0.00 0.00 2.90
4643 5306 3.423749 TCTCGTCACATAACACCCTACA 58.576 45.455 0.00 0.00 0.00 2.74
4644 5307 3.734293 GCTCTCGTCACATAACACCCTAC 60.734 52.174 0.00 0.00 0.00 3.18
4645 5308 2.426024 GCTCTCGTCACATAACACCCTA 59.574 50.000 0.00 0.00 0.00 3.53
4646 5309 1.204941 GCTCTCGTCACATAACACCCT 59.795 52.381 0.00 0.00 0.00 4.34
4647 5310 1.641577 GCTCTCGTCACATAACACCC 58.358 55.000 0.00 0.00 0.00 4.61
4648 5311 1.269166 CGCTCTCGTCACATAACACC 58.731 55.000 0.00 0.00 0.00 4.16
4649 5312 1.269166 CCGCTCTCGTCACATAACAC 58.731 55.000 0.00 0.00 0.00 3.32
4650 5313 0.457853 GCCGCTCTCGTCACATAACA 60.458 55.000 0.00 0.00 0.00 2.41
4651 5314 1.146358 GGCCGCTCTCGTCACATAAC 61.146 60.000 0.00 0.00 0.00 1.89
4652 5315 1.141019 GGCCGCTCTCGTCACATAA 59.859 57.895 0.00 0.00 0.00 1.90
4653 5316 2.805546 GGCCGCTCTCGTCACATA 59.194 61.111 0.00 0.00 0.00 2.29
4654 5317 4.498520 CGGCCGCTCTCGTCACAT 62.499 66.667 14.67 0.00 0.00 3.21
4656 5319 4.719369 AACGGCCGCTCTCGTCAC 62.719 66.667 28.58 0.00 38.78 3.67
4657 5320 4.415332 GAACGGCCGCTCTCGTCA 62.415 66.667 28.58 0.00 38.78 4.35
4658 5321 4.117661 AGAACGGCCGCTCTCGTC 62.118 66.667 25.03 12.58 38.78 4.20
4659 5322 4.421479 CAGAACGGCCGCTCTCGT 62.421 66.667 27.62 5.46 41.71 4.18
4661 5324 3.760035 TCCAGAACGGCCGCTCTC 61.760 66.667 27.62 19.85 33.14 3.20
4662 5325 4.070552 GTCCAGAACGGCCGCTCT 62.071 66.667 25.03 25.03 33.14 4.09
4691 5354 1.748403 GGCTGGATATCTGCGTCCA 59.252 57.895 2.05 0.00 42.03 4.02
4692 5355 1.373497 CGGCTGGATATCTGCGTCC 60.373 63.158 2.05 0.00 40.65 4.79
4693 5356 2.024319 GCGGCTGGATATCTGCGTC 61.024 63.158 2.05 0.44 40.65 5.19
4694 5357 2.029666 GCGGCTGGATATCTGCGT 59.970 61.111 2.05 0.00 40.65 5.24
4695 5358 2.740055 GGCGGCTGGATATCTGCG 60.740 66.667 0.00 5.91 40.65 5.18
4696 5359 2.359230 GGGCGGCTGGATATCTGC 60.359 66.667 9.56 7.59 39.26 4.26
4697 5360 2.047844 CGGGCGGCTGGATATCTG 60.048 66.667 10.55 0.00 0.00 2.90
4698 5361 4.008933 GCGGGCGGCTGGATATCT 62.009 66.667 20.56 0.00 39.11 1.98
4720 5383 1.217585 CTATGCACGCATCACCTCGG 61.218 60.000 7.99 0.00 37.82 4.63
4721 5384 0.249031 TCTATGCACGCATCACCTCG 60.249 55.000 7.99 0.00 37.82 4.63
4722 5385 1.939974 TTCTATGCACGCATCACCTC 58.060 50.000 7.99 0.00 37.82 3.85
4723 5386 2.627515 ATTCTATGCACGCATCACCT 57.372 45.000 7.99 0.00 37.82 4.00
4724 5387 2.738846 CCTATTCTATGCACGCATCACC 59.261 50.000 7.99 0.00 37.82 4.02
4725 5388 3.185188 CACCTATTCTATGCACGCATCAC 59.815 47.826 7.99 0.00 37.82 3.06
4726 5389 3.392882 CACCTATTCTATGCACGCATCA 58.607 45.455 7.99 0.00 37.82 3.07
4727 5390 2.738846 CCACCTATTCTATGCACGCATC 59.261 50.000 7.99 0.00 37.82 3.91
4728 5391 2.550855 CCCACCTATTCTATGCACGCAT 60.551 50.000 9.82 9.82 40.19 4.73
4729 5392 1.202639 CCCACCTATTCTATGCACGCA 60.203 52.381 0.00 0.00 0.00 5.24
4730 5393 1.070134 TCCCACCTATTCTATGCACGC 59.930 52.381 0.00 0.00 0.00 5.34
4731 5394 3.469008 TTCCCACCTATTCTATGCACG 57.531 47.619 0.00 0.00 0.00 5.34
4732 5395 5.827797 TGATTTTCCCACCTATTCTATGCAC 59.172 40.000 0.00 0.00 0.00 4.57
4733 5396 5.827797 GTGATTTTCCCACCTATTCTATGCA 59.172 40.000 0.00 0.00 0.00 3.96
4734 5397 5.827797 TGTGATTTTCCCACCTATTCTATGC 59.172 40.000 0.00 0.00 33.80 3.14
4735 5398 7.880160 TTGTGATTTTCCCACCTATTCTATG 57.120 36.000 0.00 0.00 33.80 2.23
4736 5399 7.445402 CGATTGTGATTTTCCCACCTATTCTAT 59.555 37.037 0.00 0.00 33.80 1.98
4737 5400 6.765989 CGATTGTGATTTTCCCACCTATTCTA 59.234 38.462 0.00 0.00 33.80 2.10
4738 5401 5.590259 CGATTGTGATTTTCCCACCTATTCT 59.410 40.000 0.00 0.00 33.80 2.40
4739 5402 5.588648 TCGATTGTGATTTTCCCACCTATTC 59.411 40.000 0.00 0.00 33.80 1.75
4740 5403 5.505780 TCGATTGTGATTTTCCCACCTATT 58.494 37.500 0.00 0.00 33.80 1.73
4741 5404 5.110814 TCGATTGTGATTTTCCCACCTAT 57.889 39.130 0.00 0.00 33.80 2.57
4742 5405 4.561500 TCGATTGTGATTTTCCCACCTA 57.438 40.909 0.00 0.00 33.80 3.08
4743 5406 3.433306 TCGATTGTGATTTTCCCACCT 57.567 42.857 0.00 0.00 33.80 4.00
4744 5407 3.734902 GCATCGATTGTGATTTTCCCACC 60.735 47.826 0.00 0.00 33.80 4.61
4745 5408 3.119531 TGCATCGATTGTGATTTTCCCAC 60.120 43.478 0.00 0.00 35.23 4.61
4746 5409 3.087781 TGCATCGATTGTGATTTTCCCA 58.912 40.909 0.00 0.00 0.00 4.37
4747 5410 3.781079 TGCATCGATTGTGATTTTCCC 57.219 42.857 0.00 0.00 0.00 3.97
4748 5411 5.820131 TGTATGCATCGATTGTGATTTTCC 58.180 37.500 0.19 0.00 0.00 3.13
4749 5412 7.919313 AATGTATGCATCGATTGTGATTTTC 57.081 32.000 0.19 0.00 33.50 2.29
4750 5413 7.592533 GCTAATGTATGCATCGATTGTGATTTT 59.407 33.333 0.19 0.00 33.50 1.82
4751 5414 7.080099 GCTAATGTATGCATCGATTGTGATTT 58.920 34.615 0.19 0.00 33.50 2.17
4752 5415 6.348786 GGCTAATGTATGCATCGATTGTGATT 60.349 38.462 0.19 0.00 33.50 2.57
4753 5416 5.122869 GGCTAATGTATGCATCGATTGTGAT 59.877 40.000 0.19 0.00 33.50 3.06
4754 5417 4.452114 GGCTAATGTATGCATCGATTGTGA 59.548 41.667 0.19 0.00 33.50 3.58
4755 5418 4.667415 CGGCTAATGTATGCATCGATTGTG 60.667 45.833 0.19 2.42 33.50 3.33
4756 5419 3.433274 CGGCTAATGTATGCATCGATTGT 59.567 43.478 0.19 0.00 33.50 2.71
4757 5420 3.433274 ACGGCTAATGTATGCATCGATTG 59.567 43.478 0.19 0.01 33.50 2.67
4758 5421 3.664107 ACGGCTAATGTATGCATCGATT 58.336 40.909 0.19 5.38 33.50 3.34
4759 5422 3.319137 ACGGCTAATGTATGCATCGAT 57.681 42.857 0.19 0.00 33.50 3.59
4760 5423 2.812358 ACGGCTAATGTATGCATCGA 57.188 45.000 0.19 0.00 33.50 3.59
4761 5424 5.099575 TGTATACGGCTAATGTATGCATCG 58.900 41.667 0.19 0.00 39.12 3.84
4762 5425 6.961359 TTGTATACGGCTAATGTATGCATC 57.039 37.500 0.19 0.00 42.05 3.91
4763 5426 7.102993 TGATTGTATACGGCTAATGTATGCAT 58.897 34.615 3.79 3.79 42.05 3.96
4764 5427 6.459923 TGATTGTATACGGCTAATGTATGCA 58.540 36.000 0.00 0.00 41.22 3.96
4765 5428 6.961359 TGATTGTATACGGCTAATGTATGC 57.039 37.500 0.00 0.00 36.03 3.14
4769 5432 9.635520 GTAGTATTGATTGTATACGGCTAATGT 57.364 33.333 0.00 0.00 34.43 2.71
4770 5433 9.856488 AGTAGTATTGATTGTATACGGCTAATG 57.144 33.333 0.00 0.00 34.43 1.90
4771 5434 9.856488 CAGTAGTATTGATTGTATACGGCTAAT 57.144 33.333 0.00 0.33 34.43 1.73
4772 5435 8.301720 CCAGTAGTATTGATTGTATACGGCTAA 58.698 37.037 0.00 0.00 34.43 3.09
4773 5436 7.576287 GCCAGTAGTATTGATTGTATACGGCTA 60.576 40.741 0.00 0.00 34.43 3.93
4774 5437 6.688578 CCAGTAGTATTGATTGTATACGGCT 58.311 40.000 0.00 0.00 34.43 5.52
4775 5438 5.347907 GCCAGTAGTATTGATTGTATACGGC 59.652 44.000 0.00 0.00 34.43 5.68
4776 5439 5.867716 GGCCAGTAGTATTGATTGTATACGG 59.132 44.000 0.00 0.00 34.43 4.02
4777 5440 6.365247 GTGGCCAGTAGTATTGATTGTATACG 59.635 42.308 5.11 0.00 34.43 3.06
4778 5441 6.365247 CGTGGCCAGTAGTATTGATTGTATAC 59.635 42.308 5.11 0.00 0.00 1.47
4779 5442 6.452242 CGTGGCCAGTAGTATTGATTGTATA 58.548 40.000 5.11 0.00 0.00 1.47
4780 5443 5.297547 CGTGGCCAGTAGTATTGATTGTAT 58.702 41.667 5.11 0.00 0.00 2.29
4781 5444 4.689071 CGTGGCCAGTAGTATTGATTGTA 58.311 43.478 5.11 0.00 0.00 2.41
4782 5445 3.531538 CGTGGCCAGTAGTATTGATTGT 58.468 45.455 5.11 0.00 0.00 2.71
4783 5446 2.287915 GCGTGGCCAGTAGTATTGATTG 59.712 50.000 5.11 0.00 0.00 2.67
4784 5447 2.170607 AGCGTGGCCAGTAGTATTGATT 59.829 45.455 5.11 0.00 0.00 2.57
4785 5448 1.762957 AGCGTGGCCAGTAGTATTGAT 59.237 47.619 5.11 0.00 0.00 2.57
4786 5449 1.134818 CAGCGTGGCCAGTAGTATTGA 60.135 52.381 5.11 0.00 0.00 2.57
4787 5450 1.134818 TCAGCGTGGCCAGTAGTATTG 60.135 52.381 5.11 0.00 0.00 1.90
4788 5451 1.134788 GTCAGCGTGGCCAGTAGTATT 60.135 52.381 5.11 0.00 0.00 1.89
4789 5452 0.460311 GTCAGCGTGGCCAGTAGTAT 59.540 55.000 5.11 0.00 0.00 2.12
4790 5453 0.896479 TGTCAGCGTGGCCAGTAGTA 60.896 55.000 5.11 0.00 0.00 1.82
4791 5454 2.207229 TGTCAGCGTGGCCAGTAGT 61.207 57.895 5.11 0.00 0.00 2.73
4792 5455 1.738099 GTGTCAGCGTGGCCAGTAG 60.738 63.158 5.11 1.12 0.00 2.57
4793 5456 2.034048 TTGTGTCAGCGTGGCCAGTA 62.034 55.000 5.11 0.00 0.00 2.74
4794 5457 3.399105 TTGTGTCAGCGTGGCCAGT 62.399 57.895 5.11 0.00 0.00 4.00
4795 5458 2.591429 TTGTGTCAGCGTGGCCAG 60.591 61.111 5.11 0.84 0.00 4.85
4796 5459 2.591429 CTTGTGTCAGCGTGGCCA 60.591 61.111 0.00 0.00 0.00 5.36
4797 5460 3.357079 CCTTGTGTCAGCGTGGCC 61.357 66.667 0.00 0.00 0.00 5.36
4798 5461 2.280797 TCCTTGTGTCAGCGTGGC 60.281 61.111 0.00 0.00 0.00 5.01
4799 5462 1.961277 GGTCCTTGTGTCAGCGTGG 60.961 63.158 0.00 0.00 0.00 4.94
4800 5463 1.224069 CTGGTCCTTGTGTCAGCGTG 61.224 60.000 0.00 0.00 0.00 5.34
4801 5464 1.069765 CTGGTCCTTGTGTCAGCGT 59.930 57.895 0.00 0.00 0.00 5.07
4802 5465 2.320587 GCTGGTCCTTGTGTCAGCG 61.321 63.158 0.00 0.00 42.24 5.18
4803 5466 3.660621 GCTGGTCCTTGTGTCAGC 58.339 61.111 0.00 0.00 44.34 4.26
4804 5467 0.886490 GGTGCTGGTCCTTGTGTCAG 60.886 60.000 0.00 0.00 0.00 3.51
4805 5468 1.148273 GGTGCTGGTCCTTGTGTCA 59.852 57.895 0.00 0.00 0.00 3.58
4806 5469 1.961277 CGGTGCTGGTCCTTGTGTC 60.961 63.158 0.00 0.00 0.00 3.67
4807 5470 2.111043 CGGTGCTGGTCCTTGTGT 59.889 61.111 0.00 0.00 0.00 3.72
4808 5471 3.357079 GCGGTGCTGGTCCTTGTG 61.357 66.667 0.00 0.00 0.00 3.33
4809 5472 3.832237 CTGCGGTGCTGGTCCTTGT 62.832 63.158 0.00 0.00 0.00 3.16
4810 5473 3.052082 CTGCGGTGCTGGTCCTTG 61.052 66.667 0.00 0.00 0.00 3.61
4811 5474 4.335647 CCTGCGGTGCTGGTCCTT 62.336 66.667 6.55 0.00 41.68 3.36
4829 5492 1.176619 AGTAAAAAGGGCCACCGTGC 61.177 55.000 6.18 0.00 43.47 5.34
4830 5493 1.808343 GTAGTAAAAAGGGCCACCGTG 59.192 52.381 6.18 0.00 43.47 4.94
4831 5494 1.701292 AGTAGTAAAAAGGGCCACCGT 59.299 47.619 6.18 0.00 43.47 4.83
4832 5495 2.081462 CAGTAGTAAAAAGGGCCACCG 58.919 52.381 6.18 0.00 43.47 4.94
4833 5496 3.150458 ACAGTAGTAAAAAGGGCCACC 57.850 47.619 6.18 0.00 0.00 4.61
4834 5497 4.581409 TGAAACAGTAGTAAAAAGGGCCAC 59.419 41.667 6.18 0.00 0.00 5.01
4835 5498 4.794334 TGAAACAGTAGTAAAAAGGGCCA 58.206 39.130 6.18 0.00 0.00 5.36
4836 5499 5.710567 AGATGAAACAGTAGTAAAAAGGGCC 59.289 40.000 0.00 0.00 0.00 5.80
4837 5500 6.819397 AGATGAAACAGTAGTAAAAAGGGC 57.181 37.500 0.00 0.00 0.00 5.19
4838 5501 7.064253 CCGTAGATGAAACAGTAGTAAAAAGGG 59.936 40.741 0.00 0.00 0.00 3.95
4839 5502 7.412672 GCCGTAGATGAAACAGTAGTAAAAAGG 60.413 40.741 0.00 0.00 0.00 3.11
4840 5503 7.453838 GCCGTAGATGAAACAGTAGTAAAAAG 58.546 38.462 0.00 0.00 0.00 2.27
4841 5504 6.089820 CGCCGTAGATGAAACAGTAGTAAAAA 59.910 38.462 0.00 0.00 0.00 1.94
4842 5505 5.574055 CGCCGTAGATGAAACAGTAGTAAAA 59.426 40.000 0.00 0.00 0.00 1.52
4843 5506 5.097529 CGCCGTAGATGAAACAGTAGTAAA 58.902 41.667 0.00 0.00 0.00 2.01
4844 5507 4.156556 ACGCCGTAGATGAAACAGTAGTAA 59.843 41.667 0.00 0.00 0.00 2.24
4845 5508 3.691118 ACGCCGTAGATGAAACAGTAGTA 59.309 43.478 0.00 0.00 0.00 1.82
4846 5509 2.490903 ACGCCGTAGATGAAACAGTAGT 59.509 45.455 0.00 0.00 0.00 2.73
4847 5510 3.106672 GACGCCGTAGATGAAACAGTAG 58.893 50.000 0.00 0.00 0.00 2.57
4848 5511 2.488937 TGACGCCGTAGATGAAACAGTA 59.511 45.455 0.00 0.00 0.00 2.74
4849 5512 1.271379 TGACGCCGTAGATGAAACAGT 59.729 47.619 0.00 0.00 0.00 3.55
4850 5513 1.990799 TGACGCCGTAGATGAAACAG 58.009 50.000 0.00 0.00 0.00 3.16
4851 5514 2.665649 ATGACGCCGTAGATGAAACA 57.334 45.000 0.00 0.00 0.00 2.83
4852 5515 2.030457 CCAATGACGCCGTAGATGAAAC 59.970 50.000 0.00 0.00 0.00 2.78
4853 5516 2.276201 CCAATGACGCCGTAGATGAAA 58.724 47.619 0.00 0.00 0.00 2.69
4854 5517 1.472552 CCCAATGACGCCGTAGATGAA 60.473 52.381 0.00 0.00 0.00 2.57
4855 5518 0.104120 CCCAATGACGCCGTAGATGA 59.896 55.000 0.00 0.00 0.00 2.92
4856 5519 0.880278 CCCCAATGACGCCGTAGATG 60.880 60.000 0.00 0.00 0.00 2.90
4857 5520 1.445942 CCCCAATGACGCCGTAGAT 59.554 57.895 0.00 0.00 0.00 1.98
4858 5521 2.897207 CCCCAATGACGCCGTAGA 59.103 61.111 0.00 0.00 0.00 2.59
4859 5522 2.895372 GCCCCAATGACGCCGTAG 60.895 66.667 0.00 0.00 0.00 3.51
4860 5523 3.379865 GAGCCCCAATGACGCCGTA 62.380 63.158 0.00 0.00 0.00 4.02
4861 5524 4.778143 GAGCCCCAATGACGCCGT 62.778 66.667 0.00 0.00 0.00 5.68
4865 5528 2.572095 TACAGCGAGCCCCAATGACG 62.572 60.000 0.00 0.00 0.00 4.35
4866 5529 0.392461 TTACAGCGAGCCCCAATGAC 60.392 55.000 0.00 0.00 0.00 3.06
4867 5530 0.546122 ATTACAGCGAGCCCCAATGA 59.454 50.000 0.00 0.00 0.00 2.57
4868 5531 1.392589 AATTACAGCGAGCCCCAATG 58.607 50.000 0.00 0.00 0.00 2.82
4869 5532 3.290948 TTAATTACAGCGAGCCCCAAT 57.709 42.857 0.00 0.00 0.00 3.16
4870 5533 2.791347 TTAATTACAGCGAGCCCCAA 57.209 45.000 0.00 0.00 0.00 4.12
4871 5534 2.948979 CAATTAATTACAGCGAGCCCCA 59.051 45.455 0.00 0.00 0.00 4.96
4872 5535 2.949644 ACAATTAATTACAGCGAGCCCC 59.050 45.455 0.00 0.00 0.00 5.80
4873 5536 3.377172 ACACAATTAATTACAGCGAGCCC 59.623 43.478 0.00 0.00 0.00 5.19
4874 5537 4.142687 ACACACAATTAATTACAGCGAGCC 60.143 41.667 0.00 0.00 0.00 4.70
4875 5538 4.969816 ACACACAATTAATTACAGCGAGC 58.030 39.130 0.00 0.00 0.00 5.03
4876 5539 6.175770 CGTACACACAATTAATTACAGCGAG 58.824 40.000 0.00 0.00 0.00 5.03
4877 5540 5.062433 CCGTACACACAATTAATTACAGCGA 59.938 40.000 0.00 0.00 0.00 4.93
4878 5541 5.252583 CCGTACACACAATTAATTACAGCG 58.747 41.667 0.00 0.61 0.00 5.18
4879 5542 5.025826 GCCGTACACACAATTAATTACAGC 58.974 41.667 0.00 0.00 0.00 4.40
4880 5543 6.247903 CAGCCGTACACACAATTAATTACAG 58.752 40.000 0.00 0.00 0.00 2.74
4881 5544 5.391097 GCAGCCGTACACACAATTAATTACA 60.391 40.000 0.00 0.00 0.00 2.41
4882 5545 5.025826 GCAGCCGTACACACAATTAATTAC 58.974 41.667 0.00 0.00 0.00 1.89
4883 5546 4.695928 TGCAGCCGTACACACAATTAATTA 59.304 37.500 0.00 0.00 0.00 1.40
4884 5547 3.504134 TGCAGCCGTACACACAATTAATT 59.496 39.130 0.00 0.00 0.00 1.40
4885 5548 3.078097 TGCAGCCGTACACACAATTAAT 58.922 40.909 0.00 0.00 0.00 1.40
4886 5549 2.224549 GTGCAGCCGTACACACAATTAA 59.775 45.455 0.00 0.00 36.77 1.40
4887 5550 1.801771 GTGCAGCCGTACACACAATTA 59.198 47.619 0.00 0.00 36.77 1.40
4888 5551 0.591170 GTGCAGCCGTACACACAATT 59.409 50.000 0.00 0.00 36.77 2.32
4889 5552 1.234615 GGTGCAGCCGTACACACAAT 61.235 55.000 4.03 0.00 38.57 2.71
4890 5553 1.890041 GGTGCAGCCGTACACACAA 60.890 57.895 4.03 0.00 38.57 3.33
4891 5554 2.280524 GGTGCAGCCGTACACACA 60.281 61.111 4.03 0.00 38.57 3.72
4901 5564 4.643387 AAGTCCCACCGGTGCAGC 62.643 66.667 29.75 19.05 0.00 5.25
4902 5565 2.113139 AAAGTCCCACCGGTGCAG 59.887 61.111 29.75 21.54 0.00 4.41
4903 5566 2.203280 CAAAGTCCCACCGGTGCA 60.203 61.111 29.75 14.81 0.00 4.57
4904 5567 2.983592 CCAAAGTCCCACCGGTGC 60.984 66.667 29.75 15.79 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.