Multiple sequence alignment - TraesCS5B01G077800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G077800 chr5B 100.000 6014 0 0 1 6014 94045106 94039093 0.000000e+00 11106.0
1 TraesCS5B01G077800 chr5B 91.857 1314 104 2 2994 4304 283931397 283930084 0.000000e+00 1831.0
2 TraesCS5B01G077800 chr5B 79.653 806 137 19 1106 1905 93827778 93828562 6.810000e-154 555.0
3 TraesCS5B01G077800 chr5B 96.337 273 9 1 2569 2840 639761628 639761356 1.190000e-121 448.0
4 TraesCS5B01G077800 chr5B 95.539 269 12 0 2569 2837 578439911 578440179 1.200000e-116 431.0
5 TraesCS5B01G077800 chr5B 94.231 104 5 1 2904 3006 623152548 623152445 2.240000e-34 158.0
6 TraesCS5B01G077800 chr5B 83.333 102 15 2 1 101 81019147 81019247 6.420000e-15 93.5
7 TraesCS5B01G077800 chr5B 81.373 102 17 2 1 101 80962565 80962665 1.390000e-11 82.4
8 TraesCS5B01G077800 chr5D 95.590 2154 66 11 1 2149 88461991 88459862 0.000000e+00 3424.0
9 TraesCS5B01G077800 chr5D 95.224 1717 76 3 4301 6014 88459312 88457599 0.000000e+00 2712.0
10 TraesCS5B01G077800 chr5D 91.045 1340 92 13 2991 4303 561944247 561945585 0.000000e+00 1784.0
11 TraesCS5B01G077800 chr5D 94.271 384 12 4 2192 2568 88459677 88459297 4.040000e-161 579.0
12 TraesCS5B01G077800 chr5D 78.436 946 152 32 1122 2035 88363315 88364240 2.430000e-158 569.0
13 TraesCS5B01G077800 chr2B 93.025 1319 85 3 2991 4302 720586443 720585125 0.000000e+00 1919.0
14 TraesCS5B01G077800 chr2B 92.553 1316 93 4 2991 4302 757294242 757295556 0.000000e+00 1882.0
15 TraesCS5B01G077800 chr2B 94.118 102 5 1 2905 3005 720586573 720586472 2.900000e-33 154.0
16 TraesCS5B01G077800 chr3B 92.009 1314 94 9 2993 4303 825637302 825635997 0.000000e+00 1834.0
17 TraesCS5B01G077800 chr3B 94.585 277 13 2 2568 2842 195352796 195352520 1.550000e-115 427.0
18 TraesCS5B01G077800 chr3B 94.118 102 5 1 2905 3005 771329040 771329141 2.900000e-33 154.0
19 TraesCS5B01G077800 chr1D 90.738 1328 101 17 2991 4307 476403240 476401924 0.000000e+00 1751.0
20 TraesCS5B01G077800 chr1D 98.889 90 1 0 2903 2992 391098200 391098111 1.730000e-35 161.0
21 TraesCS5B01G077800 chr1D 94.231 104 5 1 2903 3005 101104524 101104627 2.240000e-34 158.0
22 TraesCS5B01G077800 chr1D 93.269 104 6 1 2903 3005 31410793 31410896 1.040000e-32 152.0
23 TraesCS5B01G077800 chr7B 90.545 1322 114 7 2991 4302 70867977 70866657 0.000000e+00 1738.0
24 TraesCS5B01G077800 chr7B 88.290 649 64 10 5372 6013 110556908 110556265 0.000000e+00 767.0
25 TraesCS5B01G077800 chr7B 87.152 646 73 8 5371 6011 244777471 244778111 0.000000e+00 725.0
26 TraesCS5B01G077800 chr7B 96.679 271 9 0 2569 2839 727918533 727918263 9.190000e-123 451.0
27 TraesCS5B01G077800 chr6D 90.401 1323 97 10 2994 4302 419281401 419280095 0.000000e+00 1712.0
28 TraesCS5B01G077800 chr6D 82.008 239 30 12 2906 3132 78768671 78768908 2.210000e-44 191.0
29 TraesCS5B01G077800 chr1B 89.827 1327 112 13 2991 4302 16777516 16778834 0.000000e+00 1681.0
30 TraesCS5B01G077800 chr1B 87.309 654 72 5 5371 6014 269509821 269510473 0.000000e+00 737.0
31 TraesCS5B01G077800 chr1B 95.238 273 13 0 2567 2839 47918993 47918721 3.330000e-117 433.0
32 TraesCS5B01G077800 chr1B 93.750 48 3 0 2841 2888 625080056 625080009 8.360000e-09 73.1
33 TraesCS5B01G077800 chr1B 95.455 44 2 0 2845 2888 625142330 625142287 3.010000e-08 71.3
34 TraesCS5B01G077800 chr4B 87.462 654 69 9 5371 6014 451457164 451457814 0.000000e+00 741.0
35 TraesCS5B01G077800 chr3D 87.442 645 75 6 5372 6014 279208715 279208075 0.000000e+00 737.0
36 TraesCS5B01G077800 chrUn 87.156 654 69 11 5371 6014 103097928 103097280 0.000000e+00 728.0
37 TraesCS5B01G077800 chr2D 87.043 656 68 10 5371 6014 331663057 331663707 0.000000e+00 725.0
38 TraesCS5B01G077800 chr2D 94.059 101 5 1 2906 3005 579763650 579763750 1.040000e-32 152.0
39 TraesCS5B01G077800 chr4D 86.983 653 69 13 5371 6013 41286411 41287057 0.000000e+00 721.0
40 TraesCS5B01G077800 chr5A 79.294 821 142 17 1106 1921 81499735 81500532 3.170000e-152 549.0
41 TraesCS5B01G077800 chr5A 86.139 101 13 1 1 101 382297195 382297294 2.290000e-19 108.0
42 TraesCS5B01G077800 chr6B 94.681 282 13 2 2567 2846 144769977 144770258 2.570000e-118 436.0
43 TraesCS5B01G077800 chr6B 94.928 276 13 1 2568 2842 124390324 124390049 1.200000e-116 431.0
44 TraesCS5B01G077800 chr6B 95.185 270 13 0 2568 2837 526022724 526022993 1.550000e-115 427.0
45 TraesCS5B01G077800 chr6A 93.793 290 15 2 2551 2837 49764975 49765264 3.330000e-117 433.0
46 TraesCS5B01G077800 chr7D 89.256 121 7 5 2888 3005 68909323 68909206 4.860000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G077800 chr5B 94039093 94045106 6013 True 11106.000000 11106 100.000000 1 6014 1 chr5B.!!$R1 6013
1 TraesCS5B01G077800 chr5B 283930084 283931397 1313 True 1831.000000 1831 91.857000 2994 4304 1 chr5B.!!$R2 1310
2 TraesCS5B01G077800 chr5B 93827778 93828562 784 False 555.000000 555 79.653000 1106 1905 1 chr5B.!!$F3 799
3 TraesCS5B01G077800 chr5D 88457599 88461991 4392 True 2238.333333 3424 95.028333 1 6014 3 chr5D.!!$R1 6013
4 TraesCS5B01G077800 chr5D 561944247 561945585 1338 False 1784.000000 1784 91.045000 2991 4303 1 chr5D.!!$F2 1312
5 TraesCS5B01G077800 chr5D 88363315 88364240 925 False 569.000000 569 78.436000 1122 2035 1 chr5D.!!$F1 913
6 TraesCS5B01G077800 chr2B 757294242 757295556 1314 False 1882.000000 1882 92.553000 2991 4302 1 chr2B.!!$F1 1311
7 TraesCS5B01G077800 chr2B 720585125 720586573 1448 True 1036.500000 1919 93.571500 2905 4302 2 chr2B.!!$R1 1397
8 TraesCS5B01G077800 chr3B 825635997 825637302 1305 True 1834.000000 1834 92.009000 2993 4303 1 chr3B.!!$R2 1310
9 TraesCS5B01G077800 chr1D 476401924 476403240 1316 True 1751.000000 1751 90.738000 2991 4307 1 chr1D.!!$R2 1316
10 TraesCS5B01G077800 chr7B 70866657 70867977 1320 True 1738.000000 1738 90.545000 2991 4302 1 chr7B.!!$R1 1311
11 TraesCS5B01G077800 chr7B 110556265 110556908 643 True 767.000000 767 88.290000 5372 6013 1 chr7B.!!$R2 641
12 TraesCS5B01G077800 chr7B 244777471 244778111 640 False 725.000000 725 87.152000 5371 6011 1 chr7B.!!$F1 640
13 TraesCS5B01G077800 chr6D 419280095 419281401 1306 True 1712.000000 1712 90.401000 2994 4302 1 chr6D.!!$R1 1308
14 TraesCS5B01G077800 chr1B 16777516 16778834 1318 False 1681.000000 1681 89.827000 2991 4302 1 chr1B.!!$F1 1311
15 TraesCS5B01G077800 chr1B 269509821 269510473 652 False 737.000000 737 87.309000 5371 6014 1 chr1B.!!$F2 643
16 TraesCS5B01G077800 chr4B 451457164 451457814 650 False 741.000000 741 87.462000 5371 6014 1 chr4B.!!$F1 643
17 TraesCS5B01G077800 chr3D 279208075 279208715 640 True 737.000000 737 87.442000 5372 6014 1 chr3D.!!$R1 642
18 TraesCS5B01G077800 chrUn 103097280 103097928 648 True 728.000000 728 87.156000 5371 6014 1 chrUn.!!$R1 643
19 TraesCS5B01G077800 chr2D 331663057 331663707 650 False 725.000000 725 87.043000 5371 6014 1 chr2D.!!$F1 643
20 TraesCS5B01G077800 chr4D 41286411 41287057 646 False 721.000000 721 86.983000 5371 6013 1 chr4D.!!$F1 642
21 TraesCS5B01G077800 chr5A 81499735 81500532 797 False 549.000000 549 79.294000 1106 1921 1 chr5A.!!$F1 815

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 292 0.951558 CTGGACCGGGTTTTGTTCAG 59.048 55.0 6.32 0.0 32.07 3.02 F
1498 1507 0.172803 CGCCTTGTCTAACTACGGCT 59.827 55.0 0.00 0.0 35.46 5.52 F
2582 2768 0.035881 TGGTTGCAGAGAGAGCCTTG 59.964 55.0 0.00 0.0 0.00 3.61 F
2624 2810 0.032815 TGTGCAATCCAACGACTCGA 59.967 50.0 5.20 0.0 0.00 4.04 F
3808 4084 0.108138 GCGGTGCTTCATCCTACACT 60.108 55.0 0.00 0.0 33.53 3.55 F
3933 4209 0.323816 TCGATGGCAGAGAGACCTGT 60.324 55.0 0.00 0.0 36.57 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1588 1597 1.495584 CGCTTTACCATGGCGCGTAT 61.496 55.0 22.43 0.00 42.28 3.06 R
2605 2791 0.032815 TCGAGTCGTTGGATTGCACA 59.967 50.0 13.12 0.00 0.00 4.57 R
3808 4084 0.249868 CAAGATCCGGCGCCATTAGA 60.250 55.0 28.98 17.34 0.00 2.10 R
4575 4852 0.260816 TGGGTGCGAGAGGGTATAGT 59.739 55.0 0.00 0.00 0.00 2.12 R
4971 5248 0.033504 CCATATCTTGACGGGGTCGG 59.966 60.0 0.00 0.00 41.39 4.79 R
5046 5323 0.955919 GCTTCGCTACCCTTGCAAGT 60.956 55.0 24.35 10.95 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 127 7.661536 TGACTCTTATAGCACCACTTCTAAT 57.338 36.000 0.00 0.00 0.00 1.73
173 175 3.804786 TGATCGTATTTGGCGAACCTA 57.195 42.857 0.00 0.00 41.84 3.08
218 220 6.538263 AGCACTCCTAATTATGGGAATCTTC 58.462 40.000 0.00 0.00 35.52 2.87
290 292 0.951558 CTGGACCGGGTTTTGTTCAG 59.048 55.000 6.32 0.00 32.07 3.02
535 540 2.287909 CCGGCGAACTTTTTCAAATCCA 60.288 45.455 9.30 0.00 0.00 3.41
557 562 8.070034 TCCATGAGCTTTTTGAATACATGAAT 57.930 30.769 0.00 0.00 36.70 2.57
587 592 8.655651 TTCAAAATCCGCAAACTTTTCTTAAT 57.344 26.923 0.00 0.00 0.00 1.40
739 744 2.555325 TGGCTCAAATGCTCACTTTCAG 59.445 45.455 0.00 0.00 0.00 3.02
744 749 4.847633 TCAAATGCTCACTTTCAGTTTCG 58.152 39.130 0.00 0.00 0.00 3.46
754 759 5.463392 TCACTTTCAGTTTCGTGAAGAGATG 59.537 40.000 0.00 0.00 37.72 2.90
759 764 2.300152 AGTTTCGTGAAGAGATGAGGCA 59.700 45.455 0.00 0.00 0.00 4.75
909 915 3.081804 ACTATCCACCCGCAAGAAAAAG 58.918 45.455 0.00 0.00 43.02 2.27
962 968 1.271597 GGCTGAAGTTGTGGAGTGGAT 60.272 52.381 0.00 0.00 0.00 3.41
1103 1109 5.369833 TGCTAAGCACAAAGGTACTTTACA 58.630 37.500 0.00 0.00 45.82 2.41
1165 1171 6.498538 TCTCTTCTCCTCCTCTTGTATTTCT 58.501 40.000 0.00 0.00 0.00 2.52
1224 1230 2.122768 CTCAAGAGTATCCCAAGCCCT 58.877 52.381 0.00 0.00 33.66 5.19
1498 1507 0.172803 CGCCTTGTCTAACTACGGCT 59.827 55.000 0.00 0.00 35.46 5.52
1616 1625 1.108776 ATGGTAAAGCGCCTCTACGA 58.891 50.000 2.29 0.64 34.06 3.43
1707 1716 1.142465 GTGATCATGGCCATGGTCTCT 59.858 52.381 43.60 25.49 46.44 3.10
1764 1773 4.681978 GCGTTGACGGAGGCTGGT 62.682 66.667 5.62 0.00 40.23 4.00
1878 1887 1.961277 CAAGGAGCGCCGTGACTTT 60.961 57.895 17.08 0.00 45.22 2.66
1908 1917 1.298413 CATCGACGAGTACAGGCGG 60.298 63.158 15.08 0.00 0.00 6.13
1926 1935 4.760047 CTCAACCCCCGTGGCGAG 62.760 72.222 0.00 0.00 37.83 5.03
2037 2073 0.325933 CCCTCTGCATGGTGAGTTGA 59.674 55.000 0.00 0.00 0.00 3.18
2068 2104 1.695893 CGCATGCGTCAGGTAGTTGG 61.696 60.000 31.33 0.00 34.35 3.77
2080 2116 5.242393 GTCAGGTAGTTGGTACACTGACTAA 59.758 44.000 13.57 0.00 45.33 2.24
2159 2237 1.893544 GCTACCAGCATGCATCTCAT 58.106 50.000 21.98 1.24 41.89 2.90
2160 2238 1.805345 GCTACCAGCATGCATCTCATC 59.195 52.381 21.98 0.00 41.89 2.92
2163 2241 1.204312 CAGCATGCATCTCATCGCG 59.796 57.895 21.98 0.00 35.67 5.87
2201 2380 9.710818 AGGAGACCTACTAACTAATTAATGTGA 57.289 33.333 0.00 0.00 28.47 3.58
2292 2472 8.371770 TCATACAAATTTTAAAAAGTGGGTGC 57.628 30.769 4.44 0.00 0.00 5.01
2293 2473 7.987458 TCATACAAATTTTAAAAAGTGGGTGCA 59.013 29.630 4.44 0.00 0.00 4.57
2295 2475 6.176896 ACAAATTTTAAAAAGTGGGTGCAGT 58.823 32.000 4.44 0.00 0.00 4.40
2303 2489 2.841442 AGTGGGTGCAGTTCTAGTTC 57.159 50.000 0.00 0.00 0.00 3.01
2377 2563 4.858140 TGACGTGTACGGTGTATAACATTG 59.142 41.667 9.40 0.00 44.95 2.82
2378 2564 3.613737 ACGTGTACGGTGTATAACATTGC 59.386 43.478 9.40 0.00 44.95 3.56
2412 2598 3.539019 GCTAACGTCGAACGACAATAAGC 60.539 47.826 23.37 20.13 46.05 3.09
2450 2636 4.780324 GCGAGCAAGAAACTAATGTCGATG 60.780 45.833 0.00 0.00 0.00 3.84
2468 2654 3.056322 CGATGGCTATGATCCACTCATCA 60.056 47.826 0.00 0.00 43.70 3.07
2469 2655 4.382793 CGATGGCTATGATCCACTCATCAT 60.383 45.833 0.00 1.76 43.70 2.45
2545 2731 6.531594 TGCTAATTGATCTAGTTGAGTTGACG 59.468 38.462 0.00 0.00 0.00 4.35
2546 2732 6.752351 GCTAATTGATCTAGTTGAGTTGACGA 59.248 38.462 0.00 0.00 0.00 4.20
2547 2733 7.436673 GCTAATTGATCTAGTTGAGTTGACGAT 59.563 37.037 0.00 0.00 0.00 3.73
2548 2734 9.952188 CTAATTGATCTAGTTGAGTTGACGATA 57.048 33.333 0.00 0.00 0.00 2.92
2550 2736 8.809159 ATTGATCTAGTTGAGTTGACGATATG 57.191 34.615 0.00 0.00 0.00 1.78
2551 2737 6.209361 TGATCTAGTTGAGTTGACGATATGC 58.791 40.000 0.00 0.00 0.00 3.14
2552 2738 5.576447 TCTAGTTGAGTTGACGATATGCA 57.424 39.130 0.00 0.00 0.00 3.96
2553 2739 5.961272 TCTAGTTGAGTTGACGATATGCAA 58.039 37.500 0.00 0.00 0.00 4.08
2554 2740 4.928661 AGTTGAGTTGACGATATGCAAC 57.071 40.909 0.00 0.00 43.48 4.17
2564 2750 8.261628 GTTGACGATATGCAACTAATTGATTG 57.738 34.615 0.00 0.00 40.79 2.67
2565 2751 6.958255 TGACGATATGCAACTAATTGATTGG 58.042 36.000 0.00 0.00 38.15 3.16
2566 2752 6.542005 TGACGATATGCAACTAATTGATTGGT 59.458 34.615 0.00 0.00 38.15 3.67
2567 2753 7.066887 TGACGATATGCAACTAATTGATTGGTT 59.933 33.333 0.00 0.29 41.31 3.67
2574 2760 6.258230 CAACTAATTGATTGGTTGCAGAGA 57.742 37.500 16.47 0.00 46.83 3.10
2575 2761 6.320171 CAACTAATTGATTGGTTGCAGAGAG 58.680 40.000 16.47 0.00 46.83 3.20
2576 2762 5.809001 ACTAATTGATTGGTTGCAGAGAGA 58.191 37.500 0.00 0.00 0.00 3.10
2577 2763 5.879223 ACTAATTGATTGGTTGCAGAGAGAG 59.121 40.000 0.00 0.00 0.00 3.20
2578 2764 2.105006 TGATTGGTTGCAGAGAGAGC 57.895 50.000 0.00 0.00 0.00 4.09
2579 2765 1.339438 TGATTGGTTGCAGAGAGAGCC 60.339 52.381 0.00 0.00 0.00 4.70
2580 2766 0.990374 ATTGGTTGCAGAGAGAGCCT 59.010 50.000 0.00 0.00 0.00 4.58
2581 2767 0.767375 TTGGTTGCAGAGAGAGCCTT 59.233 50.000 0.00 0.00 0.00 4.35
2582 2768 0.035881 TGGTTGCAGAGAGAGCCTTG 59.964 55.000 0.00 0.00 0.00 3.61
2583 2769 0.676151 GGTTGCAGAGAGAGCCTTGG 60.676 60.000 0.00 0.00 0.00 3.61
2584 2770 1.002868 TTGCAGAGAGAGCCTTGGC 60.003 57.895 2.97 2.97 0.00 4.52
2585 2771 1.486997 TTGCAGAGAGAGCCTTGGCT 61.487 55.000 14.69 14.69 0.00 4.75
2586 2772 1.153389 GCAGAGAGAGCCTTGGCTC 60.153 63.158 28.67 28.67 37.11 4.70
2587 2773 1.897225 GCAGAGAGAGCCTTGGCTCA 61.897 60.000 34.40 0.00 39.13 4.26
2588 2774 0.176219 CAGAGAGAGCCTTGGCTCAG 59.824 60.000 34.40 18.91 39.13 3.35
2589 2775 0.252193 AGAGAGAGCCTTGGCTCAGT 60.252 55.000 34.40 24.13 39.13 3.41
2590 2776 0.108233 GAGAGAGCCTTGGCTCAGTG 60.108 60.000 34.40 0.00 39.13 3.66
2591 2777 1.078567 GAGAGCCTTGGCTCAGTGG 60.079 63.158 34.40 0.00 39.13 4.00
2592 2778 1.835927 GAGAGCCTTGGCTCAGTGGT 61.836 60.000 34.40 19.17 39.13 4.16
2593 2779 1.073897 GAGCCTTGGCTCAGTGGTT 59.926 57.895 30.25 1.25 36.86 3.67
2594 2780 1.228367 AGCCTTGGCTCAGTGGTTG 60.228 57.895 8.56 0.00 0.00 3.77
2595 2781 2.270986 GCCTTGGCTCAGTGGTTGG 61.271 63.158 4.11 0.00 0.00 3.77
2596 2782 1.604593 CCTTGGCTCAGTGGTTGGG 60.605 63.158 0.00 0.00 0.00 4.12
2597 2783 1.151450 CTTGGCTCAGTGGTTGGGT 59.849 57.895 0.00 0.00 0.00 4.51
2598 2784 0.400213 CTTGGCTCAGTGGTTGGGTA 59.600 55.000 0.00 0.00 0.00 3.69
2599 2785 1.004745 CTTGGCTCAGTGGTTGGGTAT 59.995 52.381 0.00 0.00 0.00 2.73
2600 2786 0.327924 TGGCTCAGTGGTTGGGTATG 59.672 55.000 0.00 0.00 0.00 2.39
2601 2787 0.328258 GGCTCAGTGGTTGGGTATGT 59.672 55.000 0.00 0.00 0.00 2.29
2602 2788 1.453155 GCTCAGTGGTTGGGTATGTG 58.547 55.000 0.00 0.00 0.00 3.21
2603 2789 1.950484 GCTCAGTGGTTGGGTATGTGG 60.950 57.143 0.00 0.00 0.00 4.17
2604 2790 1.351017 CTCAGTGGTTGGGTATGTGGT 59.649 52.381 0.00 0.00 0.00 4.16
2605 2791 1.777878 TCAGTGGTTGGGTATGTGGTT 59.222 47.619 0.00 0.00 0.00 3.67
2606 2792 1.885887 CAGTGGTTGGGTATGTGGTTG 59.114 52.381 0.00 0.00 0.00 3.77
2607 2793 1.497286 AGTGGTTGGGTATGTGGTTGT 59.503 47.619 0.00 0.00 0.00 3.32
2608 2794 1.611491 GTGGTTGGGTATGTGGTTGTG 59.389 52.381 0.00 0.00 0.00 3.33
2609 2795 0.601057 GGTTGGGTATGTGGTTGTGC 59.399 55.000 0.00 0.00 0.00 4.57
2610 2796 1.323412 GTTGGGTATGTGGTTGTGCA 58.677 50.000 0.00 0.00 0.00 4.57
2611 2797 1.683917 GTTGGGTATGTGGTTGTGCAA 59.316 47.619 0.00 0.00 0.00 4.08
2612 2798 2.298729 GTTGGGTATGTGGTTGTGCAAT 59.701 45.455 0.00 0.00 0.00 3.56
2613 2799 2.166829 TGGGTATGTGGTTGTGCAATC 58.833 47.619 0.00 0.00 0.00 2.67
2614 2800 1.476488 GGGTATGTGGTTGTGCAATCC 59.524 52.381 0.00 0.00 0.00 3.01
2615 2801 2.166829 GGTATGTGGTTGTGCAATCCA 58.833 47.619 0.00 0.00 0.00 3.41
2616 2802 2.560542 GGTATGTGGTTGTGCAATCCAA 59.439 45.455 7.23 0.00 32.82 3.53
2617 2803 2.818130 ATGTGGTTGTGCAATCCAAC 57.182 45.000 9.56 9.56 41.11 3.77
2618 2804 0.383590 TGTGGTTGTGCAATCCAACG 59.616 50.000 11.28 0.00 42.42 4.10
2619 2805 0.665835 GTGGTTGTGCAATCCAACGA 59.334 50.000 11.28 6.05 42.42 3.85
2620 2806 0.665835 TGGTTGTGCAATCCAACGAC 59.334 50.000 11.28 0.00 42.42 4.34
2621 2807 0.951558 GGTTGTGCAATCCAACGACT 59.048 50.000 11.28 0.00 42.42 4.18
2622 2808 1.069227 GGTTGTGCAATCCAACGACTC 60.069 52.381 11.28 0.00 42.42 3.36
2623 2809 0.865111 TTGTGCAATCCAACGACTCG 59.135 50.000 0.00 0.00 0.00 4.18
2624 2810 0.032815 TGTGCAATCCAACGACTCGA 59.967 50.000 5.20 0.00 0.00 4.04
2625 2811 0.716108 GTGCAATCCAACGACTCGAG 59.284 55.000 11.84 11.84 0.00 4.04
2626 2812 0.317160 TGCAATCCAACGACTCGAGT 59.683 50.000 20.18 20.18 0.00 4.18
2627 2813 1.270094 TGCAATCCAACGACTCGAGTT 60.270 47.619 21.08 0.77 0.00 3.01
2628 2814 1.390463 GCAATCCAACGACTCGAGTTC 59.610 52.381 21.08 11.81 0.00 3.01
2629 2815 2.672714 CAATCCAACGACTCGAGTTCA 58.327 47.619 21.08 0.61 0.00 3.18
2630 2816 3.057019 CAATCCAACGACTCGAGTTCAA 58.943 45.455 21.08 3.13 0.00 2.69
2631 2817 3.594603 ATCCAACGACTCGAGTTCAAT 57.405 42.857 21.08 3.89 0.00 2.57
2632 2818 3.380479 TCCAACGACTCGAGTTCAATT 57.620 42.857 21.08 8.95 0.00 2.32
2633 2819 3.314553 TCCAACGACTCGAGTTCAATTC 58.685 45.455 21.08 4.47 0.00 2.17
2634 2820 3.005472 TCCAACGACTCGAGTTCAATTCT 59.995 43.478 21.08 0.00 0.00 2.40
2635 2821 3.365220 CCAACGACTCGAGTTCAATTCTC 59.635 47.826 21.08 2.89 0.00 2.87
2645 2831 5.862924 GAGTTCAATTCTCGGAATTGACA 57.137 39.130 27.33 19.85 43.81 3.58
2646 2832 5.862811 GAGTTCAATTCTCGGAATTGACAG 58.137 41.667 27.33 11.82 43.81 3.51
2647 2833 4.697352 AGTTCAATTCTCGGAATTGACAGG 59.303 41.667 27.33 11.57 43.81 4.00
2648 2834 4.286297 TCAATTCTCGGAATTGACAGGT 57.714 40.909 25.36 0.66 40.53 4.00
2649 2835 4.002982 TCAATTCTCGGAATTGACAGGTG 58.997 43.478 25.36 10.04 40.53 4.00
2650 2836 3.981071 ATTCTCGGAATTGACAGGTGA 57.019 42.857 0.00 0.00 0.00 4.02
2651 2837 3.981071 TTCTCGGAATTGACAGGTGAT 57.019 42.857 0.00 0.00 0.00 3.06
2652 2838 3.251479 TCTCGGAATTGACAGGTGATG 57.749 47.619 0.00 0.00 0.00 3.07
2653 2839 1.667724 CTCGGAATTGACAGGTGATGC 59.332 52.381 0.00 0.00 0.00 3.91
2654 2840 1.003003 TCGGAATTGACAGGTGATGCA 59.997 47.619 0.00 0.00 0.00 3.96
2655 2841 1.131126 CGGAATTGACAGGTGATGCAC 59.869 52.381 0.00 0.00 0.00 4.57
2656 2842 2.161855 GGAATTGACAGGTGATGCACA 58.838 47.619 0.00 0.00 35.86 4.57
2657 2843 2.163010 GGAATTGACAGGTGATGCACAG 59.837 50.000 0.00 0.00 35.86 3.66
2658 2844 1.830279 ATTGACAGGTGATGCACAGG 58.170 50.000 0.00 0.00 35.86 4.00
2659 2845 0.250858 TTGACAGGTGATGCACAGGG 60.251 55.000 0.00 0.00 35.86 4.45
2660 2846 1.377725 GACAGGTGATGCACAGGGG 60.378 63.158 0.00 0.00 35.86 4.79
2661 2847 2.129555 GACAGGTGATGCACAGGGGT 62.130 60.000 0.00 0.00 35.86 4.95
2662 2848 1.075482 CAGGTGATGCACAGGGGTT 59.925 57.895 0.00 0.00 35.86 4.11
2663 2849 0.540365 CAGGTGATGCACAGGGGTTT 60.540 55.000 0.00 0.00 35.86 3.27
2664 2850 0.188342 AGGTGATGCACAGGGGTTTT 59.812 50.000 0.00 0.00 35.86 2.43
2665 2851 0.603065 GGTGATGCACAGGGGTTTTC 59.397 55.000 0.00 0.00 35.86 2.29
2666 2852 1.620822 GTGATGCACAGGGGTTTTCT 58.379 50.000 0.00 0.00 34.08 2.52
2667 2853 1.541588 GTGATGCACAGGGGTTTTCTC 59.458 52.381 0.00 0.00 34.08 2.87
2668 2854 1.177401 GATGCACAGGGGTTTTCTCC 58.823 55.000 0.00 0.00 41.79 3.71
2669 2855 0.251787 ATGCACAGGGGTTTTCTCCC 60.252 55.000 0.00 0.00 42.67 4.30
2679 2865 4.696899 GGGTTTTCTCCCGTTTATTGAG 57.303 45.455 0.00 0.00 37.93 3.02
2680 2866 3.442625 GGGTTTTCTCCCGTTTATTGAGG 59.557 47.826 0.00 0.00 37.93 3.86
2681 2867 4.329392 GGTTTTCTCCCGTTTATTGAGGA 58.671 43.478 0.00 0.00 0.00 3.71
2682 2868 4.948004 GGTTTTCTCCCGTTTATTGAGGAT 59.052 41.667 0.00 0.00 0.00 3.24
2683 2869 5.066117 GGTTTTCTCCCGTTTATTGAGGATC 59.934 44.000 0.00 0.00 0.00 3.36
2696 2882 3.708403 TGAGGATCAAGCTTGATGTGT 57.292 42.857 39.54 25.29 45.97 3.72
2697 2883 3.340928 TGAGGATCAAGCTTGATGTGTG 58.659 45.455 39.54 9.89 45.97 3.82
2698 2884 3.871074 TGAGGATCAAGCTTGATGTGTGG 60.871 47.826 39.54 8.23 45.97 4.17
2699 2885 6.331880 TGAGGATCAAGCTTGATGTGTGGT 62.332 45.833 39.54 19.99 45.97 4.16
2701 2887 1.608055 TCAAGCTTGATGTGTGGTGG 58.392 50.000 25.16 0.00 31.01 4.61
2702 2888 1.142667 TCAAGCTTGATGTGTGGTGGA 59.857 47.619 25.16 0.00 31.01 4.02
2703 2889 1.955778 CAAGCTTGATGTGTGGTGGAA 59.044 47.619 22.31 0.00 0.00 3.53
2704 2890 1.609208 AGCTTGATGTGTGGTGGAAC 58.391 50.000 0.00 0.00 0.00 3.62
2722 2908 7.020914 GTGGAACCACTCATCAAGAAATATC 57.979 40.000 15.69 0.00 43.12 1.63
2723 2909 6.825721 GTGGAACCACTCATCAAGAAATATCT 59.174 38.462 15.69 0.00 43.12 1.98
2724 2910 7.337942 GTGGAACCACTCATCAAGAAATATCTT 59.662 37.037 15.69 0.00 43.57 2.40
2764 2950 9.492973 AAAATTTTGAGGACCATGTTTATCTTG 57.507 29.630 1.75 0.00 0.00 3.02
2765 2951 8.421249 AATTTTGAGGACCATGTTTATCTTGA 57.579 30.769 0.00 0.00 0.00 3.02
2766 2952 8.599624 ATTTTGAGGACCATGTTTATCTTGAT 57.400 30.769 0.00 0.00 0.00 2.57
2767 2953 9.699410 ATTTTGAGGACCATGTTTATCTTGATA 57.301 29.630 0.00 0.00 0.00 2.15
2768 2954 8.506168 TTTGAGGACCATGTTTATCTTGATAC 57.494 34.615 0.00 0.00 0.00 2.24
2769 2955 7.437713 TGAGGACCATGTTTATCTTGATACT 57.562 36.000 0.00 0.00 0.00 2.12
2770 2956 7.500992 TGAGGACCATGTTTATCTTGATACTC 58.499 38.462 0.00 0.00 0.00 2.59
2771 2957 7.125659 TGAGGACCATGTTTATCTTGATACTCA 59.874 37.037 0.00 0.00 0.00 3.41
2772 2958 8.038862 AGGACCATGTTTATCTTGATACTCAT 57.961 34.615 0.00 0.00 0.00 2.90
2773 2959 9.159254 AGGACCATGTTTATCTTGATACTCATA 57.841 33.333 0.00 0.00 0.00 2.15
2774 2960 9.209175 GGACCATGTTTATCTTGATACTCATAC 57.791 37.037 0.00 0.00 0.00 2.39
2775 2961 9.988815 GACCATGTTTATCTTGATACTCATACT 57.011 33.333 0.00 0.00 0.00 2.12
2784 2970 8.854614 ATCTTGATACTCATACTAAAATGGCC 57.145 34.615 0.00 0.00 0.00 5.36
2785 2971 6.929049 TCTTGATACTCATACTAAAATGGCCG 59.071 38.462 0.00 0.00 0.00 6.13
2786 2972 6.169557 TGATACTCATACTAAAATGGCCGT 57.830 37.500 0.00 0.00 0.00 5.68
2787 2973 7.292713 TGATACTCATACTAAAATGGCCGTA 57.707 36.000 0.00 0.00 0.00 4.02
2788 2974 7.903145 TGATACTCATACTAAAATGGCCGTAT 58.097 34.615 0.00 0.00 0.00 3.06
2789 2975 7.817478 TGATACTCATACTAAAATGGCCGTATG 59.183 37.037 16.02 16.02 40.13 2.39
2790 2976 4.755123 ACTCATACTAAAATGGCCGTATGC 59.245 41.667 16.90 0.00 39.17 3.14
2791 2977 4.709250 TCATACTAAAATGGCCGTATGCA 58.291 39.130 16.90 0.00 43.89 3.96
2792 2978 5.312895 TCATACTAAAATGGCCGTATGCAT 58.687 37.500 16.90 3.79 43.89 3.96
2793 2979 5.411361 TCATACTAAAATGGCCGTATGCATC 59.589 40.000 16.90 0.00 43.89 3.91
2794 2980 3.820557 ACTAAAATGGCCGTATGCATCT 58.179 40.909 0.19 0.00 43.89 2.90
2795 2981 4.207165 ACTAAAATGGCCGTATGCATCTT 58.793 39.130 0.19 0.00 43.89 2.40
2796 2982 4.644685 ACTAAAATGGCCGTATGCATCTTT 59.355 37.500 0.19 0.00 43.89 2.52
2797 2983 5.825679 ACTAAAATGGCCGTATGCATCTTTA 59.174 36.000 0.19 0.00 43.89 1.85
2798 2984 4.836125 AAATGGCCGTATGCATCTTTAG 57.164 40.909 0.19 0.00 43.89 1.85
2799 2985 3.492102 ATGGCCGTATGCATCTTTAGT 57.508 42.857 0.19 0.00 43.89 2.24
2800 2986 3.275617 TGGCCGTATGCATCTTTAGTT 57.724 42.857 0.19 0.00 43.89 2.24
2801 2987 2.942376 TGGCCGTATGCATCTTTAGTTG 59.058 45.455 0.19 0.00 43.89 3.16
2802 2988 2.290641 GGCCGTATGCATCTTTAGTTGG 59.709 50.000 0.19 0.00 43.89 3.77
2803 2989 2.943033 GCCGTATGCATCTTTAGTTGGT 59.057 45.455 0.19 0.00 40.77 3.67
2804 2990 3.242739 GCCGTATGCATCTTTAGTTGGTG 60.243 47.826 0.19 0.00 40.77 4.17
2805 2991 3.242739 CCGTATGCATCTTTAGTTGGTGC 60.243 47.826 0.19 0.00 36.39 5.01
2808 2994 3.138884 TGCATCTTTAGTTGGTGCAGA 57.861 42.857 0.00 0.00 40.51 4.26
2809 2995 3.689347 TGCATCTTTAGTTGGTGCAGAT 58.311 40.909 0.00 0.00 40.51 2.90
2810 2996 3.441222 TGCATCTTTAGTTGGTGCAGATG 59.559 43.478 0.00 3.55 42.54 2.90
2811 2997 4.025015 CATCTTTAGTTGGTGCAGATGC 57.975 45.455 0.00 0.00 35.70 3.91
2812 2998 2.436417 TCTTTAGTTGGTGCAGATGCC 58.564 47.619 1.72 0.00 41.18 4.40
2813 2999 1.131126 CTTTAGTTGGTGCAGATGCCG 59.869 52.381 1.72 0.00 41.18 5.69
2814 3000 0.676466 TTAGTTGGTGCAGATGCCGG 60.676 55.000 0.00 0.00 41.18 6.13
2815 3001 2.535485 TAGTTGGTGCAGATGCCGGG 62.535 60.000 2.18 0.00 41.18 5.73
2816 3002 3.645660 TTGGTGCAGATGCCGGGA 61.646 61.111 2.18 0.00 41.18 5.14
2817 3003 3.203086 TTGGTGCAGATGCCGGGAA 62.203 57.895 0.00 0.00 41.18 3.97
2818 3004 2.825836 GGTGCAGATGCCGGGAAG 60.826 66.667 0.00 0.00 41.18 3.46
2819 3005 2.045926 GTGCAGATGCCGGGAAGT 60.046 61.111 0.00 0.00 41.18 3.01
2820 3006 2.046023 TGCAGATGCCGGGAAGTG 60.046 61.111 0.00 0.70 41.18 3.16
2821 3007 2.268920 GCAGATGCCGGGAAGTGA 59.731 61.111 0.00 0.00 34.31 3.41
2822 3008 1.377202 GCAGATGCCGGGAAGTGAA 60.377 57.895 0.00 0.00 34.31 3.18
2823 3009 0.960364 GCAGATGCCGGGAAGTGAAA 60.960 55.000 0.00 0.00 34.31 2.69
2824 3010 1.533625 CAGATGCCGGGAAGTGAAAA 58.466 50.000 0.00 0.00 0.00 2.29
2825 3011 2.094675 CAGATGCCGGGAAGTGAAAAT 58.905 47.619 0.00 0.00 0.00 1.82
2826 3012 2.098117 CAGATGCCGGGAAGTGAAAATC 59.902 50.000 0.00 0.00 0.00 2.17
2827 3013 2.025887 AGATGCCGGGAAGTGAAAATCT 60.026 45.455 0.00 0.00 0.00 2.40
2828 3014 1.821216 TGCCGGGAAGTGAAAATCTC 58.179 50.000 2.18 0.00 0.00 2.75
2829 3015 1.095600 GCCGGGAAGTGAAAATCTCC 58.904 55.000 2.18 0.00 0.00 3.71
2830 3016 1.751437 CCGGGAAGTGAAAATCTCCC 58.249 55.000 0.00 0.00 0.00 4.30
2831 3017 1.682087 CCGGGAAGTGAAAATCTCCCC 60.682 57.143 0.00 0.00 34.05 4.81
2832 3018 1.004277 CGGGAAGTGAAAATCTCCCCA 59.996 52.381 0.00 0.00 34.05 4.96
2833 3019 2.357154 CGGGAAGTGAAAATCTCCCCAT 60.357 50.000 0.00 0.00 34.05 4.00
2834 3020 3.713003 GGGAAGTGAAAATCTCCCCATT 58.287 45.455 0.00 0.00 32.77 3.16
2835 3021 4.096681 GGGAAGTGAAAATCTCCCCATTT 58.903 43.478 0.00 0.00 32.77 2.32
2836 3022 4.532126 GGGAAGTGAAAATCTCCCCATTTT 59.468 41.667 0.00 0.00 38.43 1.82
2837 3023 5.719563 GGGAAGTGAAAATCTCCCCATTTTA 59.280 40.000 0.00 0.00 36.33 1.52
2838 3024 6.212589 GGGAAGTGAAAATCTCCCCATTTTAA 59.787 38.462 0.00 0.00 36.33 1.52
2839 3025 7.323420 GGAAGTGAAAATCTCCCCATTTTAAG 58.677 38.462 0.00 0.00 36.33 1.85
2840 3026 6.857437 AGTGAAAATCTCCCCATTTTAAGG 57.143 37.500 0.00 0.00 36.33 2.69
2841 3027 6.322931 AGTGAAAATCTCCCCATTTTAAGGT 58.677 36.000 0.00 0.00 36.33 3.50
2842 3028 6.211384 AGTGAAAATCTCCCCATTTTAAGGTG 59.789 38.462 0.00 0.00 36.33 4.00
2843 3029 5.483583 TGAAAATCTCCCCATTTTAAGGTGG 59.516 40.000 2.12 2.12 36.33 4.61
2849 3035 2.230130 CCATTTTAAGGTGGGGAGCA 57.770 50.000 1.31 0.00 0.00 4.26
2850 3036 2.102578 CCATTTTAAGGTGGGGAGCAG 58.897 52.381 1.31 0.00 0.00 4.24
2851 3037 2.102578 CATTTTAAGGTGGGGAGCAGG 58.897 52.381 0.00 0.00 0.00 4.85
2852 3038 0.251608 TTTTAAGGTGGGGAGCAGGC 60.252 55.000 0.00 0.00 0.00 4.85
2853 3039 1.431195 TTTAAGGTGGGGAGCAGGCA 61.431 55.000 0.00 0.00 0.00 4.75
2854 3040 1.852157 TTAAGGTGGGGAGCAGGCAG 61.852 60.000 0.00 0.00 0.00 4.85
2855 3041 4.990910 AGGTGGGGAGCAGGCAGT 62.991 66.667 0.00 0.00 0.00 4.40
2856 3042 3.009115 GGTGGGGAGCAGGCAGTA 61.009 66.667 0.00 0.00 0.00 2.74
2857 3043 2.586792 GTGGGGAGCAGGCAGTAG 59.413 66.667 0.00 0.00 0.00 2.57
2858 3044 1.990060 GTGGGGAGCAGGCAGTAGA 60.990 63.158 0.00 0.00 0.00 2.59
2859 3045 1.687146 TGGGGAGCAGGCAGTAGAG 60.687 63.158 0.00 0.00 0.00 2.43
2860 3046 1.687493 GGGGAGCAGGCAGTAGAGT 60.687 63.158 0.00 0.00 0.00 3.24
2861 3047 0.397254 GGGGAGCAGGCAGTAGAGTA 60.397 60.000 0.00 0.00 0.00 2.59
2862 3048 1.486211 GGGAGCAGGCAGTAGAGTAA 58.514 55.000 0.00 0.00 0.00 2.24
2863 3049 2.043227 GGGAGCAGGCAGTAGAGTAAT 58.957 52.381 0.00 0.00 0.00 1.89
2864 3050 2.436173 GGGAGCAGGCAGTAGAGTAATT 59.564 50.000 0.00 0.00 0.00 1.40
2865 3051 3.462021 GGAGCAGGCAGTAGAGTAATTG 58.538 50.000 0.00 0.00 0.00 2.32
2866 3052 2.869192 GAGCAGGCAGTAGAGTAATTGC 59.131 50.000 0.00 0.00 35.87 3.56
2872 3058 3.861840 GCAGTAGAGTAATTGCCACAGA 58.138 45.455 0.00 0.00 0.00 3.41
2873 3059 3.619038 GCAGTAGAGTAATTGCCACAGAC 59.381 47.826 0.00 0.00 0.00 3.51
2874 3060 4.184629 CAGTAGAGTAATTGCCACAGACC 58.815 47.826 0.00 0.00 0.00 3.85
2875 3061 3.838317 AGTAGAGTAATTGCCACAGACCA 59.162 43.478 0.00 0.00 0.00 4.02
2876 3062 3.059352 AGAGTAATTGCCACAGACCAC 57.941 47.619 0.00 0.00 0.00 4.16
2877 3063 1.732259 GAGTAATTGCCACAGACCACG 59.268 52.381 0.00 0.00 0.00 4.94
2878 3064 1.346395 AGTAATTGCCACAGACCACGA 59.654 47.619 0.00 0.00 0.00 4.35
2879 3065 1.463444 GTAATTGCCACAGACCACGAC 59.537 52.381 0.00 0.00 0.00 4.34
2880 3066 0.108585 AATTGCCACAGACCACGACT 59.891 50.000 0.00 0.00 0.00 4.18
2881 3067 0.108585 ATTGCCACAGACCACGACTT 59.891 50.000 0.00 0.00 0.00 3.01
2882 3068 0.813610 TTGCCACAGACCACGACTTG 60.814 55.000 0.00 0.00 0.00 3.16
2891 3077 2.031012 CACGACTTGGAGCAGGCA 59.969 61.111 0.00 0.00 0.00 4.75
2892 3078 2.031516 CACGACTTGGAGCAGGCAG 61.032 63.158 0.00 0.00 0.00 4.85
2893 3079 2.345244 CGACTTGGAGCAGGCAGT 59.655 61.111 0.00 0.00 0.00 4.40
2894 3080 1.185618 ACGACTTGGAGCAGGCAGTA 61.186 55.000 0.00 0.00 0.00 2.74
2895 3081 0.459237 CGACTTGGAGCAGGCAGTAG 60.459 60.000 0.00 0.00 0.00 2.57
2896 3082 0.898320 GACTTGGAGCAGGCAGTAGA 59.102 55.000 0.00 0.00 0.00 2.59
2897 3083 0.901124 ACTTGGAGCAGGCAGTAGAG 59.099 55.000 0.00 0.00 0.00 2.43
2898 3084 0.901124 CTTGGAGCAGGCAGTAGAGT 59.099 55.000 0.00 0.00 0.00 3.24
2899 3085 2.103373 CTTGGAGCAGGCAGTAGAGTA 58.897 52.381 0.00 0.00 0.00 2.59
2900 3086 2.231716 TGGAGCAGGCAGTAGAGTAA 57.768 50.000 0.00 0.00 0.00 2.24
2901 3087 2.752030 TGGAGCAGGCAGTAGAGTAAT 58.248 47.619 0.00 0.00 0.00 1.89
2902 3088 3.107601 TGGAGCAGGCAGTAGAGTAATT 58.892 45.455 0.00 0.00 0.00 1.40
2903 3089 3.133003 TGGAGCAGGCAGTAGAGTAATTC 59.867 47.826 0.00 0.00 0.00 2.17
2957 3143 2.335369 CGGAACCCTAGATCGCCG 59.665 66.667 0.00 0.00 0.00 6.46
2959 3145 2.499827 GGAACCCTAGATCGCCGCT 61.500 63.158 0.00 0.00 0.00 5.52
3306 3570 3.423154 GGCGGTTGGCTTCGTCAG 61.423 66.667 0.00 0.00 42.94 3.51
3547 3812 0.528684 GAGTTGGATCCCTTCGAGCG 60.529 60.000 9.90 0.00 0.00 5.03
3572 3837 1.029681 GGGTGAAAACTTGCCTTCGT 58.970 50.000 0.00 0.00 0.00 3.85
3630 3895 3.253432 GTCGTTTCCTTCTTGAAGGCATT 59.747 43.478 21.16 0.00 39.80 3.56
3664 3929 2.534042 TAAGGCCACTCTCTGCTACT 57.466 50.000 5.01 0.00 0.00 2.57
3721 3997 1.371558 GGCTCTGGTGTCGTTCCTT 59.628 57.895 0.00 0.00 0.00 3.36
3771 4047 1.342474 ACATGATCGAGGGACCAGAGT 60.342 52.381 0.00 0.00 0.00 3.24
3808 4084 0.108138 GCGGTGCTTCATCCTACACT 60.108 55.000 0.00 0.00 33.53 3.55
3818 4094 2.035961 TCATCCTACACTCTAATGGCGC 59.964 50.000 0.00 0.00 0.00 6.53
3857 4133 1.160137 GCAGTGCAGATTCGGAGTTT 58.840 50.000 11.09 0.00 0.00 2.66
3910 4186 4.657824 CTGTCGGGCGTCGTGGTT 62.658 66.667 0.00 0.00 40.32 3.67
3933 4209 0.323816 TCGATGGCAGAGAGACCTGT 60.324 55.000 0.00 0.00 36.57 4.00
3949 4225 0.438445 CTGTCACGGTACATGCAACG 59.562 55.000 0.73 0.73 0.00 4.10
4011 4287 3.385749 CTCATACCCGGCAGGCGTT 62.386 63.158 16.17 4.25 40.58 4.84
4125 4401 4.188462 CGATGTCTGTTTGGTATTAGGCA 58.812 43.478 0.00 0.00 0.00 4.75
4199 4476 4.381292 GCTTAGACGGTGGCTTTAGTCTTA 60.381 45.833 9.79 2.50 42.99 2.10
4250 4527 6.856426 GTGAGAATAATTAATAAAGTGGCCGC 59.144 38.462 8.71 8.71 0.00 6.53
4277 4554 3.473647 CCAGATGCAGAGGCCGGA 61.474 66.667 5.05 0.00 40.13 5.14
4329 4606 8.845413 AATTGCTTGGTTAGATAATTTTTGCA 57.155 26.923 0.00 0.00 0.00 4.08
4378 4655 8.806146 ACTAATCTTATTTCAACTTTGGTGCAT 58.194 29.630 0.00 0.00 0.00 3.96
4422 4699 2.398498 GACACATCATCTAGCGCGATT 58.602 47.619 12.10 0.00 0.00 3.34
4462 4739 0.727398 GCTCAATAACCCAGACGTGC 59.273 55.000 0.00 0.00 0.00 5.34
4477 4754 3.952508 TGCTGGCCAAGGCGAAGA 61.953 61.111 7.01 0.00 43.06 2.87
4489 4766 0.452184 GGCGAAGACTGAGATCGACA 59.548 55.000 10.20 0.00 43.91 4.35
4539 4816 0.972883 AGAGTGACCTGGAAGTGCTC 59.027 55.000 0.00 0.83 0.00 4.26
4563 4840 1.126488 ACCTCCGATGCATCATCACT 58.874 50.000 25.70 2.60 40.54 3.41
4575 4852 0.331616 TCATCACTGAGACCCTCCGA 59.668 55.000 0.00 0.00 0.00 4.55
4605 4882 2.433664 GCACCCAACCTCGTACCG 60.434 66.667 0.00 0.00 0.00 4.02
4630 4907 3.756677 CGTCGCGTGACTGCACAG 61.757 66.667 25.28 6.31 45.41 3.66
4671 4948 1.451337 TTGCACGTGGAACCATGGTG 61.451 55.000 20.60 7.99 37.27 4.17
4707 4984 1.451387 CATACAACGGGACCCTGCC 60.451 63.158 9.41 0.00 0.00 4.85
4743 5020 2.093075 AGACATGTTCATGCCAGAGAGG 60.093 50.000 12.00 0.00 41.84 3.69
4766 5043 0.749649 GTGGGTGGCAATGTTTGTGA 59.250 50.000 0.00 0.00 0.00 3.58
4806 5083 2.770130 ATGCCGTTTGGGATGGGT 59.230 55.556 0.00 0.00 45.83 4.51
4857 5134 0.399233 GGAGGATGGTGGGAGTAGCT 60.399 60.000 0.00 0.00 0.00 3.32
4929 5206 1.153349 GGACATGAGCGAGGGTTCC 60.153 63.158 0.00 0.00 0.00 3.62
4949 5226 1.660560 GGGCTCACCATGCACATGTC 61.661 60.000 9.63 0.00 39.85 3.06
4971 5248 1.208614 GCAGCTAGTTGCAGTGTGC 59.791 57.895 24.76 0.00 45.94 4.57
4977 5254 2.725203 TAGTTGCAGTGTGCCGACCC 62.725 60.000 0.00 0.00 44.23 4.46
5046 5323 4.688879 CCTTAAGCGTTGTGAGTTGATACA 59.311 41.667 0.00 0.00 0.00 2.29
5129 5406 6.469782 AAGTGACCTTTTGAACATTGACAT 57.530 33.333 0.00 0.00 0.00 3.06
5158 5435 9.485206 TCTTCAAGATGTAACTTTACCACTAAC 57.515 33.333 0.00 0.00 32.72 2.34
5251 5528 7.415206 GCCATAAAGTTTTGTGATCCGAGTTAT 60.415 37.037 0.00 0.00 31.84 1.89
5252 5529 7.910162 CCATAAAGTTTTGTGATCCGAGTTATG 59.090 37.037 0.00 0.00 31.84 1.90
5261 5538 9.451002 TTTGTGATCCGAGTTATGGTTAATTAA 57.549 29.630 0.00 0.00 0.00 1.40
5327 5607 9.760077 AATATATATAAACCGGCCGATTCTAAG 57.240 33.333 30.73 10.69 0.00 2.18
5350 5630 0.397187 TAGCCCAACTAAACGCACCA 59.603 50.000 0.00 0.00 0.00 4.17
5446 5730 4.093408 GCTATACCACATCATATGCAACCG 59.907 45.833 0.00 0.00 0.00 4.44
5580 5866 7.817418 TCTTGTTGCTAGATTAACTTTTGGT 57.183 32.000 0.00 0.00 0.00 3.67
5692 5980 0.107017 ATTGCCCTCTTGCGTATGCT 60.107 50.000 8.69 0.00 43.34 3.79
5694 5982 0.104855 TGCCCTCTTGCGTATGCTAG 59.895 55.000 11.61 11.61 44.04 3.42
5722 6010 9.593134 GTTCACTATTCTTGACTATGATGAAGT 57.407 33.333 0.00 0.00 0.00 3.01
5818 6107 3.323243 CGTTAATGAACTGAACCGGAGT 58.677 45.455 9.46 0.00 33.01 3.85
5935 6224 3.323243 CCACTGTTGGGAAACGTAGTAG 58.677 50.000 0.00 0.00 38.81 2.57
5987 6284 8.829746 AGGAACAATATGAAGATGCATATAGGA 58.170 33.333 0.00 0.00 39.80 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 7.143514 ACATACGAACCCGCTTTTTAAAATA 57.856 32.000 0.55 0.00 39.95 1.40
153 155 2.684001 AGGTTCGCCAAATACGATCA 57.316 45.000 0.00 0.00 39.65 2.92
173 175 4.088421 CGCGAAGTCGTGCCTTAT 57.912 55.556 0.00 0.00 43.06 1.73
519 524 7.719778 AAAGCTCATGGATTTGAAAAAGTTC 57.280 32.000 0.00 0.00 31.85 3.01
667 672 9.100554 TCACGAACATAGAAAGTTTGAAAGTTA 57.899 29.630 0.00 0.00 35.00 2.24
668 673 7.981142 TCACGAACATAGAAAGTTTGAAAGTT 58.019 30.769 0.00 0.00 35.00 2.66
669 674 7.548196 TCACGAACATAGAAAGTTTGAAAGT 57.452 32.000 0.00 0.00 35.00 2.66
670 675 6.575201 GCTCACGAACATAGAAAGTTTGAAAG 59.425 38.462 0.00 0.00 35.00 2.62
686 691 7.803189 TCATAAATTTCAAAAGAGCTCACGAAC 59.197 33.333 17.77 0.00 0.00 3.95
739 744 2.670414 CTGCCTCATCTCTTCACGAAAC 59.330 50.000 0.00 0.00 0.00 2.78
744 749 3.688673 CCTTTTCTGCCTCATCTCTTCAC 59.311 47.826 0.00 0.00 0.00 3.18
754 759 2.416893 CGCTTTCTACCTTTTCTGCCTC 59.583 50.000 0.00 0.00 0.00 4.70
759 764 4.452455 CACACATCGCTTTCTACCTTTTCT 59.548 41.667 0.00 0.00 0.00 2.52
962 968 5.570205 TTATTGGAGTGTGTTGGGACTAA 57.430 39.130 0.00 0.00 0.00 2.24
1165 1171 2.584673 CCTTGCGAGGAGAGGAGAA 58.415 57.895 15.76 0.00 46.74 2.87
1326 1332 1.984570 CCGAAGGCTGAGGAGACCA 60.985 63.158 2.63 0.00 46.14 4.02
1458 1464 4.436998 CTGGGGCACTCGTCCGTC 62.437 72.222 0.00 0.00 38.02 4.79
1498 1507 3.134792 GAGGTCGCGCCAGAGAGA 61.135 66.667 19.30 0.00 40.61 3.10
1588 1597 1.495584 CGCTTTACCATGGCGCGTAT 61.496 55.000 22.43 0.00 42.28 3.06
1661 1670 2.936007 CGAACTCGTACGCCGTCG 60.936 66.667 11.24 14.29 37.94 5.12
1764 1773 4.903010 GATCCCGCCGCCGCTAAA 62.903 66.667 0.00 0.00 0.00 1.85
2037 2073 1.721487 GCATGCGACTTTGGCGTAT 59.279 52.632 0.00 0.00 34.46 3.06
2163 2241 2.610859 TCTCCTTCCAGCCCACCC 60.611 66.667 0.00 0.00 0.00 4.61
2175 2253 9.710818 TCACATTAATTAGTTAGTAGGTCTCCT 57.289 33.333 0.00 0.00 37.71 3.69
2241 2420 2.741122 TCACCGTGCTTAAACAAACG 57.259 45.000 0.00 0.00 35.85 3.60
2275 2455 6.233905 AGAACTGCACCCACTTTTTAAAAT 57.766 33.333 0.55 0.00 0.00 1.82
2378 2564 0.887933 ACGTTAGCCAAGCAAATGGG 59.112 50.000 5.50 0.00 41.01 4.00
2412 2598 2.033424 TGCTCGCTACAGCATACACTAG 59.967 50.000 1.61 0.00 44.73 2.57
2486 2672 9.309516 TGTTAACAATAGTTGTGCTATACTAGC 57.690 33.333 5.64 0.00 44.59 3.42
2551 2737 6.149973 TCTCTCTGCAACCAATCAATTAGTTG 59.850 38.462 8.95 8.95 40.66 3.16
2552 2738 6.240894 TCTCTCTGCAACCAATCAATTAGTT 58.759 36.000 0.00 0.00 0.00 2.24
2553 2739 5.809001 TCTCTCTGCAACCAATCAATTAGT 58.191 37.500 0.00 0.00 0.00 2.24
2554 2740 5.220815 GCTCTCTCTGCAACCAATCAATTAG 60.221 44.000 0.00 0.00 0.00 1.73
2555 2741 4.637534 GCTCTCTCTGCAACCAATCAATTA 59.362 41.667 0.00 0.00 0.00 1.40
2556 2742 3.442977 GCTCTCTCTGCAACCAATCAATT 59.557 43.478 0.00 0.00 0.00 2.32
2557 2743 3.015327 GCTCTCTCTGCAACCAATCAAT 58.985 45.455 0.00 0.00 0.00 2.57
2558 2744 2.430465 GCTCTCTCTGCAACCAATCAA 58.570 47.619 0.00 0.00 0.00 2.57
2559 2745 1.339438 GGCTCTCTCTGCAACCAATCA 60.339 52.381 0.00 0.00 0.00 2.57
2560 2746 1.065564 AGGCTCTCTCTGCAACCAATC 60.066 52.381 0.00 0.00 0.00 2.67
2561 2747 0.990374 AGGCTCTCTCTGCAACCAAT 59.010 50.000 0.00 0.00 0.00 3.16
2562 2748 0.767375 AAGGCTCTCTCTGCAACCAA 59.233 50.000 0.00 0.00 0.00 3.67
2563 2749 0.035881 CAAGGCTCTCTCTGCAACCA 59.964 55.000 0.00 0.00 0.00 3.67
2564 2750 0.676151 CCAAGGCTCTCTCTGCAACC 60.676 60.000 0.00 0.00 0.00 3.77
2565 2751 1.304509 GCCAAGGCTCTCTCTGCAAC 61.305 60.000 3.29 0.00 38.26 4.17
2566 2752 1.002868 GCCAAGGCTCTCTCTGCAA 60.003 57.895 3.29 0.00 38.26 4.08
2567 2753 2.667418 GCCAAGGCTCTCTCTGCA 59.333 61.111 3.29 0.00 38.26 4.41
2577 2763 2.270986 CCAACCACTGAGCCAAGGC 61.271 63.158 2.02 2.02 42.33 4.35
2578 2764 1.604593 CCCAACCACTGAGCCAAGG 60.605 63.158 0.00 0.00 0.00 3.61
2579 2765 0.400213 TACCCAACCACTGAGCCAAG 59.600 55.000 0.00 0.00 0.00 3.61
2580 2766 1.072266 ATACCCAACCACTGAGCCAA 58.928 50.000 0.00 0.00 0.00 4.52
2581 2767 0.327924 CATACCCAACCACTGAGCCA 59.672 55.000 0.00 0.00 0.00 4.75
2582 2768 0.328258 ACATACCCAACCACTGAGCC 59.672 55.000 0.00 0.00 0.00 4.70
2583 2769 1.453155 CACATACCCAACCACTGAGC 58.547 55.000 0.00 0.00 0.00 4.26
2584 2770 1.351017 ACCACATACCCAACCACTGAG 59.649 52.381 0.00 0.00 0.00 3.35
2585 2771 1.440618 ACCACATACCCAACCACTGA 58.559 50.000 0.00 0.00 0.00 3.41
2586 2772 1.885887 CAACCACATACCCAACCACTG 59.114 52.381 0.00 0.00 0.00 3.66
2587 2773 1.497286 ACAACCACATACCCAACCACT 59.503 47.619 0.00 0.00 0.00 4.00
2588 2774 1.611491 CACAACCACATACCCAACCAC 59.389 52.381 0.00 0.00 0.00 4.16
2589 2775 1.988293 CACAACCACATACCCAACCA 58.012 50.000 0.00 0.00 0.00 3.67
2590 2776 0.601057 GCACAACCACATACCCAACC 59.399 55.000 0.00 0.00 0.00 3.77
2591 2777 1.323412 TGCACAACCACATACCCAAC 58.677 50.000 0.00 0.00 0.00 3.77
2592 2778 2.073252 TTGCACAACCACATACCCAA 57.927 45.000 0.00 0.00 0.00 4.12
2593 2779 2.166829 GATTGCACAACCACATACCCA 58.833 47.619 0.00 0.00 0.00 4.51
2594 2780 1.476488 GGATTGCACAACCACATACCC 59.524 52.381 0.00 0.00 0.00 3.69
2595 2781 2.166829 TGGATTGCACAACCACATACC 58.833 47.619 2.15 0.00 0.00 2.73
2596 2782 3.574614 GTTGGATTGCACAACCACATAC 58.425 45.455 7.29 0.54 41.70 2.39
2597 2783 2.227626 CGTTGGATTGCACAACCACATA 59.772 45.455 11.74 0.00 43.95 2.29
2598 2784 1.000385 CGTTGGATTGCACAACCACAT 60.000 47.619 11.74 0.00 43.95 3.21
2599 2785 0.383590 CGTTGGATTGCACAACCACA 59.616 50.000 11.74 0.53 43.95 4.17
2600 2786 0.665835 TCGTTGGATTGCACAACCAC 59.334 50.000 11.74 4.99 43.95 4.16
2601 2787 0.665835 GTCGTTGGATTGCACAACCA 59.334 50.000 11.74 7.22 43.95 3.67
2602 2788 0.951558 AGTCGTTGGATTGCACAACC 59.048 50.000 11.74 4.89 43.95 3.77
2603 2789 1.398451 CGAGTCGTTGGATTGCACAAC 60.398 52.381 3.82 8.27 43.52 3.32
2604 2790 0.865111 CGAGTCGTTGGATTGCACAA 59.135 50.000 3.82 0.00 0.00 3.33
2605 2791 0.032815 TCGAGTCGTTGGATTGCACA 59.967 50.000 13.12 0.00 0.00 4.57
2606 2792 0.716108 CTCGAGTCGTTGGATTGCAC 59.284 55.000 13.12 0.00 0.00 4.57
2607 2793 0.317160 ACTCGAGTCGTTGGATTGCA 59.683 50.000 13.58 0.00 0.00 4.08
2608 2794 1.390463 GAACTCGAGTCGTTGGATTGC 59.610 52.381 20.33 0.00 0.00 3.56
2609 2795 2.672714 TGAACTCGAGTCGTTGGATTG 58.327 47.619 20.33 0.00 0.00 2.67
2610 2796 3.380479 TTGAACTCGAGTCGTTGGATT 57.620 42.857 20.33 0.00 0.00 3.01
2611 2797 3.594603 ATTGAACTCGAGTCGTTGGAT 57.405 42.857 20.33 0.00 0.00 3.41
2612 2798 3.005472 AGAATTGAACTCGAGTCGTTGGA 59.995 43.478 20.33 2.61 30.20 3.53
2613 2799 3.318017 AGAATTGAACTCGAGTCGTTGG 58.682 45.455 20.33 6.88 30.20 3.77
2614 2800 4.554162 GAGAATTGAACTCGAGTCGTTG 57.446 45.455 20.33 9.38 30.20 4.10
2623 2809 5.163814 CCTGTCAATTCCGAGAATTGAACTC 60.164 44.000 28.27 21.08 45.06 3.01
2624 2810 4.697352 CCTGTCAATTCCGAGAATTGAACT 59.303 41.667 28.27 3.85 45.06 3.01
2625 2811 4.455877 ACCTGTCAATTCCGAGAATTGAAC 59.544 41.667 28.27 23.55 45.06 3.18
2626 2812 4.455533 CACCTGTCAATTCCGAGAATTGAA 59.544 41.667 28.27 20.97 45.06 2.69
2627 2813 4.002982 CACCTGTCAATTCCGAGAATTGA 58.997 43.478 25.36 25.36 42.44 2.57
2628 2814 4.002982 TCACCTGTCAATTCCGAGAATTG 58.997 43.478 22.82 22.82 38.60 2.32
2629 2815 4.286297 TCACCTGTCAATTCCGAGAATT 57.714 40.909 6.17 6.17 0.00 2.17
2630 2816 3.981071 TCACCTGTCAATTCCGAGAAT 57.019 42.857 0.00 0.00 0.00 2.40
2631 2817 3.599343 CATCACCTGTCAATTCCGAGAA 58.401 45.455 0.00 0.00 0.00 2.87
2632 2818 2.677902 GCATCACCTGTCAATTCCGAGA 60.678 50.000 0.00 0.00 0.00 4.04
2633 2819 1.667724 GCATCACCTGTCAATTCCGAG 59.332 52.381 0.00 0.00 0.00 4.63
2634 2820 1.003003 TGCATCACCTGTCAATTCCGA 59.997 47.619 0.00 0.00 0.00 4.55
2635 2821 1.131126 GTGCATCACCTGTCAATTCCG 59.869 52.381 0.00 0.00 0.00 4.30
2636 2822 2.161855 TGTGCATCACCTGTCAATTCC 58.838 47.619 0.00 0.00 32.73 3.01
2637 2823 2.163010 CCTGTGCATCACCTGTCAATTC 59.837 50.000 0.00 0.00 32.73 2.17
2638 2824 2.165167 CCTGTGCATCACCTGTCAATT 58.835 47.619 0.00 0.00 32.73 2.32
2639 2825 1.615116 CCCTGTGCATCACCTGTCAAT 60.615 52.381 0.00 0.00 32.73 2.57
2640 2826 0.250858 CCCTGTGCATCACCTGTCAA 60.251 55.000 0.00 0.00 32.73 3.18
2641 2827 1.376086 CCCTGTGCATCACCTGTCA 59.624 57.895 0.00 0.00 32.73 3.58
2642 2828 1.377725 CCCCTGTGCATCACCTGTC 60.378 63.158 0.00 0.00 32.73 3.51
2643 2829 1.719063 AACCCCTGTGCATCACCTGT 61.719 55.000 0.00 0.00 32.73 4.00
2644 2830 0.540365 AAACCCCTGTGCATCACCTG 60.540 55.000 0.00 0.00 32.73 4.00
2645 2831 0.188342 AAAACCCCTGTGCATCACCT 59.812 50.000 0.00 0.00 32.73 4.00
2646 2832 0.603065 GAAAACCCCTGTGCATCACC 59.397 55.000 0.00 0.00 32.73 4.02
2647 2833 1.541588 GAGAAAACCCCTGTGCATCAC 59.458 52.381 0.00 0.00 34.56 3.06
2648 2834 1.547675 GGAGAAAACCCCTGTGCATCA 60.548 52.381 0.00 0.00 0.00 3.07
2649 2835 1.177401 GGAGAAAACCCCTGTGCATC 58.823 55.000 0.00 0.00 0.00 3.91
2650 2836 0.251787 GGGAGAAAACCCCTGTGCAT 60.252 55.000 0.00 0.00 43.81 3.96
2651 2837 1.152830 GGGAGAAAACCCCTGTGCA 59.847 57.895 0.00 0.00 43.81 4.57
2652 2838 1.971695 CGGGAGAAAACCCCTGTGC 60.972 63.158 0.00 0.00 46.62 4.57
2653 2839 0.179001 AACGGGAGAAAACCCCTGTG 60.179 55.000 0.00 0.00 46.62 3.66
2654 2840 0.554305 AAACGGGAGAAAACCCCTGT 59.446 50.000 0.00 0.00 46.62 4.00
2655 2841 2.572209 TAAACGGGAGAAAACCCCTG 57.428 50.000 0.00 0.00 46.62 4.45
2656 2842 3.074836 TCAATAAACGGGAGAAAACCCCT 59.925 43.478 0.00 0.00 46.62 4.79
2657 2843 3.423749 TCAATAAACGGGAGAAAACCCC 58.576 45.455 0.00 0.00 46.62 4.95
2658 2844 3.442625 CCTCAATAAACGGGAGAAAACCC 59.557 47.826 0.00 0.00 45.92 4.11
2659 2845 4.329392 TCCTCAATAAACGGGAGAAAACC 58.671 43.478 0.00 0.00 0.00 3.27
2660 2846 5.646360 TGATCCTCAATAAACGGGAGAAAAC 59.354 40.000 0.00 0.00 0.00 2.43
2661 2847 5.811190 TGATCCTCAATAAACGGGAGAAAA 58.189 37.500 0.00 0.00 0.00 2.29
2662 2848 5.429681 TGATCCTCAATAAACGGGAGAAA 57.570 39.130 0.00 0.00 0.00 2.52
2663 2849 5.428253 CTTGATCCTCAATAAACGGGAGAA 58.572 41.667 0.00 0.00 35.59 2.87
2664 2850 4.683400 GCTTGATCCTCAATAAACGGGAGA 60.683 45.833 0.00 0.00 35.59 3.71
2665 2851 3.561725 GCTTGATCCTCAATAAACGGGAG 59.438 47.826 0.00 0.00 35.59 4.30
2666 2852 3.199946 AGCTTGATCCTCAATAAACGGGA 59.800 43.478 0.00 0.00 35.59 5.14
2667 2853 3.545703 AGCTTGATCCTCAATAAACGGG 58.454 45.455 0.00 0.00 35.59 5.28
2668 2854 4.635765 TCAAGCTTGATCCTCAATAAACGG 59.364 41.667 25.16 0.00 35.59 4.44
2669 2855 5.801350 TCAAGCTTGATCCTCAATAAACG 57.199 39.130 25.16 0.00 35.59 3.60
2670 2856 6.971184 CACATCAAGCTTGATCCTCAATAAAC 59.029 38.462 33.95 0.00 45.62 2.01
2671 2857 6.660521 ACACATCAAGCTTGATCCTCAATAAA 59.339 34.615 33.95 8.63 45.62 1.40
2672 2858 6.094464 CACACATCAAGCTTGATCCTCAATAA 59.906 38.462 33.95 9.15 45.62 1.40
2673 2859 5.587443 CACACATCAAGCTTGATCCTCAATA 59.413 40.000 33.95 9.89 45.62 1.90
2674 2860 4.398358 CACACATCAAGCTTGATCCTCAAT 59.602 41.667 33.95 14.18 45.62 2.57
2675 2861 3.754850 CACACATCAAGCTTGATCCTCAA 59.245 43.478 33.95 11.36 45.62 3.02
2676 2862 3.340928 CACACATCAAGCTTGATCCTCA 58.659 45.455 33.95 12.10 45.62 3.86
2677 2863 2.681848 CCACACATCAAGCTTGATCCTC 59.318 50.000 33.95 0.00 45.62 3.71
2678 2864 2.040813 ACCACACATCAAGCTTGATCCT 59.959 45.455 33.95 21.20 45.62 3.24
2679 2865 2.163010 CACCACACATCAAGCTTGATCC 59.837 50.000 33.95 0.00 45.62 3.36
2680 2866 2.163010 CCACCACACATCAAGCTTGATC 59.837 50.000 33.95 0.00 45.62 2.92
2682 2868 1.142667 TCCACCACACATCAAGCTTGA 59.857 47.619 30.23 30.23 42.14 3.02
2683 2869 1.608055 TCCACCACACATCAAGCTTG 58.392 50.000 20.81 20.81 0.00 4.01
2684 2870 1.956477 GTTCCACCACACATCAAGCTT 59.044 47.619 0.00 0.00 0.00 3.74
2685 2871 1.609208 GTTCCACCACACATCAAGCT 58.391 50.000 0.00 0.00 0.00 3.74
2686 2872 0.598065 GGTTCCACCACACATCAAGC 59.402 55.000 0.00 0.00 38.42 4.01
2687 2873 1.979855 TGGTTCCACCACACATCAAG 58.020 50.000 0.00 0.00 44.79 3.02
2697 2883 2.859165 TCTTGATGAGTGGTTCCACC 57.141 50.000 17.06 10.07 37.65 4.61
2698 2884 6.825721 AGATATTTCTTGATGAGTGGTTCCAC 59.174 38.462 13.45 13.45 37.23 4.02
2699 2885 6.962182 AGATATTTCTTGATGAGTGGTTCCA 58.038 36.000 0.00 0.00 0.00 3.53
2700 2886 7.872113 AAGATATTTCTTGATGAGTGGTTCC 57.128 36.000 0.00 0.00 40.74 3.62
2738 2924 9.492973 CAAGATAAACATGGTCCTCAAAATTTT 57.507 29.630 0.00 0.00 0.00 1.82
2739 2925 8.869109 TCAAGATAAACATGGTCCTCAAAATTT 58.131 29.630 0.00 0.00 0.00 1.82
2740 2926 8.421249 TCAAGATAAACATGGTCCTCAAAATT 57.579 30.769 0.00 0.00 0.00 1.82
2741 2927 8.599624 ATCAAGATAAACATGGTCCTCAAAAT 57.400 30.769 0.00 0.00 0.00 1.82
2742 2928 8.956426 GTATCAAGATAAACATGGTCCTCAAAA 58.044 33.333 0.00 0.00 0.00 2.44
2743 2929 8.328758 AGTATCAAGATAAACATGGTCCTCAAA 58.671 33.333 0.00 0.00 0.00 2.69
2744 2930 7.861629 AGTATCAAGATAAACATGGTCCTCAA 58.138 34.615 0.00 0.00 0.00 3.02
2745 2931 7.125659 TGAGTATCAAGATAAACATGGTCCTCA 59.874 37.037 0.00 0.00 45.97 3.86
2746 2932 7.500992 TGAGTATCAAGATAAACATGGTCCTC 58.499 38.462 0.00 0.00 45.97 3.71
2747 2933 7.437713 TGAGTATCAAGATAAACATGGTCCT 57.562 36.000 0.00 0.00 45.97 3.85
2764 2950 7.201530 GCATACGGCCATTTTAGTATGAGTATC 60.202 40.741 22.80 7.37 45.38 2.24
2765 2951 6.594159 GCATACGGCCATTTTAGTATGAGTAT 59.406 38.462 22.80 7.56 45.38 2.12
2766 2952 5.929992 GCATACGGCCATTTTAGTATGAGTA 59.070 40.000 22.80 5.76 45.38 2.59
2767 2953 4.755123 GCATACGGCCATTTTAGTATGAGT 59.245 41.667 22.80 3.85 45.38 3.41
2768 2954 4.754618 TGCATACGGCCATTTTAGTATGAG 59.245 41.667 22.80 5.28 45.38 2.90
2769 2955 4.709250 TGCATACGGCCATTTTAGTATGA 58.291 39.130 22.80 10.38 45.38 2.15
2770 2956 5.412594 AGATGCATACGGCCATTTTAGTATG 59.587 40.000 17.22 17.22 45.34 2.39
2771 2957 5.560724 AGATGCATACGGCCATTTTAGTAT 58.439 37.500 2.24 0.00 43.89 2.12
2772 2958 4.968259 AGATGCATACGGCCATTTTAGTA 58.032 39.130 2.24 0.00 43.89 1.82
2773 2959 3.820557 AGATGCATACGGCCATTTTAGT 58.179 40.909 2.24 0.00 43.89 2.24
2774 2960 4.836125 AAGATGCATACGGCCATTTTAG 57.164 40.909 2.24 0.00 43.89 1.85
2775 2961 5.825679 ACTAAAGATGCATACGGCCATTTTA 59.174 36.000 2.24 0.00 43.89 1.52
2776 2962 4.644685 ACTAAAGATGCATACGGCCATTTT 59.355 37.500 2.24 0.00 43.89 1.82
2777 2963 4.207165 ACTAAAGATGCATACGGCCATTT 58.793 39.130 2.24 0.00 43.89 2.32
2778 2964 3.820557 ACTAAAGATGCATACGGCCATT 58.179 40.909 2.24 0.00 43.89 3.16
2779 2965 3.492102 ACTAAAGATGCATACGGCCAT 57.508 42.857 2.24 0.00 43.89 4.40
2780 2966 2.942376 CAACTAAAGATGCATACGGCCA 59.058 45.455 2.24 0.00 43.89 5.36
2781 2967 2.290641 CCAACTAAAGATGCATACGGCC 59.709 50.000 0.00 0.00 43.89 6.13
2782 2968 2.943033 ACCAACTAAAGATGCATACGGC 59.057 45.455 0.00 0.00 45.13 5.68
2783 2969 3.242739 GCACCAACTAAAGATGCATACGG 60.243 47.826 0.00 0.00 36.30 4.02
2784 2970 3.373748 TGCACCAACTAAAGATGCATACG 59.626 43.478 0.00 0.00 41.18 3.06
2785 2971 4.635765 TCTGCACCAACTAAAGATGCATAC 59.364 41.667 0.00 0.00 44.73 2.39
2786 2972 4.842574 TCTGCACCAACTAAAGATGCATA 58.157 39.130 0.00 0.00 44.73 3.14
2787 2973 3.689347 TCTGCACCAACTAAAGATGCAT 58.311 40.909 0.00 0.00 44.73 3.96
2788 2974 3.138884 TCTGCACCAACTAAAGATGCA 57.861 42.857 0.00 0.00 43.70 3.96
2789 2975 4.025015 CATCTGCACCAACTAAAGATGC 57.975 45.455 0.00 0.00 38.24 3.91
2790 2976 3.181493 GGCATCTGCACCAACTAAAGATG 60.181 47.826 4.33 6.60 44.55 2.90
2791 2977 3.019564 GGCATCTGCACCAACTAAAGAT 58.980 45.455 4.33 0.00 44.36 2.40
2792 2978 2.436417 GGCATCTGCACCAACTAAAGA 58.564 47.619 4.33 0.00 44.36 2.52
2793 2979 1.131126 CGGCATCTGCACCAACTAAAG 59.869 52.381 4.33 0.00 44.36 1.85
2794 2980 1.164411 CGGCATCTGCACCAACTAAA 58.836 50.000 4.33 0.00 44.36 1.85
2795 2981 0.676466 CCGGCATCTGCACCAACTAA 60.676 55.000 4.33 0.00 44.36 2.24
2796 2982 1.078497 CCGGCATCTGCACCAACTA 60.078 57.895 4.33 0.00 44.36 2.24
2797 2983 2.360350 CCGGCATCTGCACCAACT 60.360 61.111 4.33 0.00 44.36 3.16
2798 2984 3.443045 CCCGGCATCTGCACCAAC 61.443 66.667 0.00 0.00 44.36 3.77
2799 2985 3.203086 TTCCCGGCATCTGCACCAA 62.203 57.895 0.00 0.00 44.36 3.67
2800 2986 3.626996 CTTCCCGGCATCTGCACCA 62.627 63.158 0.00 0.00 44.36 4.17
2801 2987 2.825836 CTTCCCGGCATCTGCACC 60.826 66.667 0.00 0.00 44.36 5.01
2802 2988 2.045926 ACTTCCCGGCATCTGCAC 60.046 61.111 0.00 0.00 44.36 4.57
2803 2989 2.046023 CACTTCCCGGCATCTGCA 60.046 61.111 0.00 0.00 44.36 4.41
2804 2990 0.960364 TTTCACTTCCCGGCATCTGC 60.960 55.000 0.00 0.00 41.14 4.26
2805 2991 1.533625 TTTTCACTTCCCGGCATCTG 58.466 50.000 0.00 0.00 0.00 2.90
2806 2992 2.025887 AGATTTTCACTTCCCGGCATCT 60.026 45.455 0.00 0.00 0.00 2.90
2807 2993 2.356069 GAGATTTTCACTTCCCGGCATC 59.644 50.000 0.00 0.00 0.00 3.91
2808 2994 2.369394 GAGATTTTCACTTCCCGGCAT 58.631 47.619 0.00 0.00 0.00 4.40
2809 2995 1.613255 GGAGATTTTCACTTCCCGGCA 60.613 52.381 0.00 0.00 0.00 5.69
2810 2996 1.095600 GGAGATTTTCACTTCCCGGC 58.904 55.000 0.00 0.00 0.00 6.13
2811 2997 1.682087 GGGGAGATTTTCACTTCCCGG 60.682 57.143 0.00 0.00 42.52 5.73
2812 2998 1.751437 GGGGAGATTTTCACTTCCCG 58.249 55.000 0.00 0.00 42.52 5.14
2814 3000 5.745312 AAAATGGGGAGATTTTCACTTCC 57.255 39.130 0.00 0.00 31.21 3.46
2815 3001 7.039011 ACCTTAAAATGGGGAGATTTTCACTTC 60.039 37.037 0.00 0.00 36.94 3.01
2816 3002 6.787458 ACCTTAAAATGGGGAGATTTTCACTT 59.213 34.615 0.00 0.00 36.94 3.16
2817 3003 6.211384 CACCTTAAAATGGGGAGATTTTCACT 59.789 38.462 0.00 0.00 36.94 3.41
2818 3004 6.398095 CACCTTAAAATGGGGAGATTTTCAC 58.602 40.000 0.00 0.00 36.94 3.18
2819 3005 5.483583 CCACCTTAAAATGGGGAGATTTTCA 59.516 40.000 0.00 0.00 36.94 2.69
2820 3006 5.977635 CCACCTTAAAATGGGGAGATTTTC 58.022 41.667 0.00 0.00 36.94 2.29
2830 3016 2.102578 CTGCTCCCCACCTTAAAATGG 58.897 52.381 0.00 0.00 35.59 3.16
2831 3017 2.102578 CCTGCTCCCCACCTTAAAATG 58.897 52.381 0.00 0.00 0.00 2.32
2832 3018 1.619704 GCCTGCTCCCCACCTTAAAAT 60.620 52.381 0.00 0.00 0.00 1.82
2833 3019 0.251608 GCCTGCTCCCCACCTTAAAA 60.252 55.000 0.00 0.00 0.00 1.52
2834 3020 1.382629 GCCTGCTCCCCACCTTAAA 59.617 57.895 0.00 0.00 0.00 1.52
2835 3021 1.850289 TGCCTGCTCCCCACCTTAA 60.850 57.895 0.00 0.00 0.00 1.85
2836 3022 2.204074 TGCCTGCTCCCCACCTTA 60.204 61.111 0.00 0.00 0.00 2.69
2837 3023 3.655211 CTGCCTGCTCCCCACCTT 61.655 66.667 0.00 0.00 0.00 3.50
2838 3024 3.562681 TACTGCCTGCTCCCCACCT 62.563 63.158 0.00 0.00 0.00 4.00
2839 3025 3.009115 TACTGCCTGCTCCCCACC 61.009 66.667 0.00 0.00 0.00 4.61
2840 3026 1.965754 CTCTACTGCCTGCTCCCCAC 61.966 65.000 0.00 0.00 0.00 4.61
2841 3027 1.687146 CTCTACTGCCTGCTCCCCA 60.687 63.158 0.00 0.00 0.00 4.96
2842 3028 0.397254 TACTCTACTGCCTGCTCCCC 60.397 60.000 0.00 0.00 0.00 4.81
2843 3029 1.486211 TTACTCTACTGCCTGCTCCC 58.514 55.000 0.00 0.00 0.00 4.30
2844 3030 3.462021 CAATTACTCTACTGCCTGCTCC 58.538 50.000 0.00 0.00 0.00 4.70
2845 3031 2.869192 GCAATTACTCTACTGCCTGCTC 59.131 50.000 0.00 0.00 0.00 4.26
2846 3032 2.911484 GCAATTACTCTACTGCCTGCT 58.089 47.619 0.00 0.00 0.00 4.24
2851 3037 3.619038 GTCTGTGGCAATTACTCTACTGC 59.381 47.826 0.00 0.00 0.00 4.40
2852 3038 4.184629 GGTCTGTGGCAATTACTCTACTG 58.815 47.826 0.00 0.00 0.00 2.74
2853 3039 3.838317 TGGTCTGTGGCAATTACTCTACT 59.162 43.478 0.00 0.00 0.00 2.57
2854 3040 3.933332 GTGGTCTGTGGCAATTACTCTAC 59.067 47.826 0.00 0.00 0.00 2.59
2855 3041 3.368013 CGTGGTCTGTGGCAATTACTCTA 60.368 47.826 0.00 0.00 0.00 2.43
2856 3042 2.612972 CGTGGTCTGTGGCAATTACTCT 60.613 50.000 0.00 0.00 0.00 3.24
2857 3043 1.732259 CGTGGTCTGTGGCAATTACTC 59.268 52.381 0.00 0.00 0.00 2.59
2858 3044 1.346395 TCGTGGTCTGTGGCAATTACT 59.654 47.619 0.00 0.00 0.00 2.24
2859 3045 1.463444 GTCGTGGTCTGTGGCAATTAC 59.537 52.381 0.00 0.00 0.00 1.89
2860 3046 1.346395 AGTCGTGGTCTGTGGCAATTA 59.654 47.619 0.00 0.00 0.00 1.40
2861 3047 0.108585 AGTCGTGGTCTGTGGCAATT 59.891 50.000 0.00 0.00 0.00 2.32
2862 3048 0.108585 AAGTCGTGGTCTGTGGCAAT 59.891 50.000 0.00 0.00 0.00 3.56
2863 3049 0.813610 CAAGTCGTGGTCTGTGGCAA 60.814 55.000 0.00 0.00 0.00 4.52
2864 3050 1.227527 CAAGTCGTGGTCTGTGGCA 60.228 57.895 0.00 0.00 0.00 4.92
2865 3051 1.961277 CCAAGTCGTGGTCTGTGGC 60.961 63.158 0.00 0.00 43.20 5.01
2866 3052 4.361253 CCAAGTCGTGGTCTGTGG 57.639 61.111 0.00 0.00 43.20 4.17
2874 3060 2.031012 TGCCTGCTCCAAGTCGTG 59.969 61.111 0.00 0.00 0.00 4.35
2875 3061 1.185618 TACTGCCTGCTCCAAGTCGT 61.186 55.000 0.00 0.00 0.00 4.34
2876 3062 0.459237 CTACTGCCTGCTCCAAGTCG 60.459 60.000 0.00 0.00 0.00 4.18
2877 3063 0.898320 TCTACTGCCTGCTCCAAGTC 59.102 55.000 0.00 0.00 0.00 3.01
2878 3064 0.901124 CTCTACTGCCTGCTCCAAGT 59.099 55.000 0.00 0.00 0.00 3.16
2879 3065 0.901124 ACTCTACTGCCTGCTCCAAG 59.099 55.000 0.00 0.00 0.00 3.61
2880 3066 2.231716 TACTCTACTGCCTGCTCCAA 57.768 50.000 0.00 0.00 0.00 3.53
2881 3067 2.231716 TTACTCTACTGCCTGCTCCA 57.768 50.000 0.00 0.00 0.00 3.86
2882 3068 3.493524 GGAATTACTCTACTGCCTGCTCC 60.494 52.174 0.00 0.00 0.00 4.70
2883 3069 3.493524 GGGAATTACTCTACTGCCTGCTC 60.494 52.174 0.00 0.00 0.00 4.26
2884 3070 2.436173 GGGAATTACTCTACTGCCTGCT 59.564 50.000 0.00 0.00 0.00 4.24
2885 3071 2.485657 GGGGAATTACTCTACTGCCTGC 60.486 54.545 0.00 0.00 0.00 4.85
2886 3072 2.104963 GGGGGAATTACTCTACTGCCTG 59.895 54.545 0.00 0.00 0.00 4.85
2887 3073 2.409570 GGGGGAATTACTCTACTGCCT 58.590 52.381 0.00 0.00 0.00 4.75
2888 3074 1.070289 CGGGGGAATTACTCTACTGCC 59.930 57.143 0.00 0.00 0.00 4.85
2889 3075 1.761198 ACGGGGGAATTACTCTACTGC 59.239 52.381 0.00 0.00 0.00 4.40
2890 3076 2.364647 GGACGGGGGAATTACTCTACTG 59.635 54.545 0.00 0.00 0.00 2.74
2891 3077 2.675583 GGACGGGGGAATTACTCTACT 58.324 52.381 0.00 0.00 0.00 2.57
2892 3078 1.690893 GGGACGGGGGAATTACTCTAC 59.309 57.143 0.00 0.00 0.00 2.59
2893 3079 1.413517 GGGGACGGGGGAATTACTCTA 60.414 57.143 0.00 0.00 0.00 2.43
2894 3080 0.693430 GGGGACGGGGGAATTACTCT 60.693 60.000 0.00 0.00 0.00 3.24
2895 3081 1.703014 GGGGGACGGGGGAATTACTC 61.703 65.000 0.00 0.00 0.00 2.59
2896 3082 1.695239 GGGGGACGGGGGAATTACT 60.695 63.158 0.00 0.00 0.00 2.24
2897 3083 2.921435 GGGGGACGGGGGAATTAC 59.079 66.667 0.00 0.00 0.00 1.89
2898 3084 2.769195 CGGGGGACGGGGGAATTA 60.769 66.667 0.00 0.00 39.42 1.40
2957 3143 4.416738 AGAAAGGGGAGCGGCAGC 62.417 66.667 0.00 0.00 45.58 5.25
2959 3145 4.082523 CGAGAAAGGGGAGCGGCA 62.083 66.667 1.45 0.00 0.00 5.69
3170 3424 2.663188 GCGCCATCAGATCGGGAC 60.663 66.667 0.00 0.00 0.00 4.46
3547 3812 1.546029 GGCAAGTTTTCACCCAGATCC 59.454 52.381 0.00 0.00 0.00 3.36
3630 3895 1.880646 GCCTTAAACTTCTCCACGGCA 60.881 52.381 0.00 0.00 36.37 5.69
3721 3997 1.497309 AAGAATGACGCCCCCAAGGA 61.497 55.000 0.00 0.00 38.24 3.36
3771 4047 2.343101 CGCTCCACCAAAGAATTCGTA 58.657 47.619 0.00 0.00 0.00 3.43
3808 4084 0.249868 CAAGATCCGGCGCCATTAGA 60.250 55.000 28.98 17.34 0.00 2.10
3818 4094 2.885644 CACGCCGTCAAGATCCGG 60.886 66.667 0.00 0.00 46.90 5.14
3857 4133 1.229625 AGTCCATCCTCCCACAGCA 60.230 57.895 0.00 0.00 0.00 4.41
3910 4186 2.046285 TCTCTCTGCCATCGACGCA 61.046 57.895 8.58 8.58 34.41 5.24
3933 4209 0.602060 TACCGTTGCATGTACCGTGA 59.398 50.000 0.00 0.00 0.00 4.35
3949 4225 4.878397 CCAATCCATCTTCAGAGTTGTACC 59.122 45.833 0.00 0.00 0.00 3.34
4011 4287 2.343758 GCGCACTCCTCAACCAGA 59.656 61.111 0.30 0.00 0.00 3.86
4082 4358 3.063997 CGCAGCCAAACCTAAACATCTAG 59.936 47.826 0.00 0.00 0.00 2.43
4125 4401 0.978146 AAGGGGCGCAGATAGTCTGT 60.978 55.000 10.83 0.00 45.94 3.41
4199 4476 3.071479 CCGTACAAAGCCATACAACAGT 58.929 45.455 0.00 0.00 0.00 3.55
4422 4699 2.803155 GAAGTGCCATCGCCCACTCA 62.803 60.000 0.00 0.00 41.16 3.41
4462 4739 2.037136 CAGTCTTCGCCTTGGCCAG 61.037 63.158 5.11 0.00 0.00 4.85
4522 4799 2.062070 GGAGCACTTCCAGGTCACT 58.938 57.895 0.00 0.00 46.01 3.41
4539 4816 0.758734 TGATGCATCGGAGGTAAGGG 59.241 55.000 21.34 0.00 0.00 3.95
4563 4840 1.144503 GGGTATAGTCGGAGGGTCTCA 59.855 57.143 0.00 0.00 31.08 3.27
4575 4852 0.260816 TGGGTGCGAGAGGGTATAGT 59.739 55.000 0.00 0.00 0.00 2.12
4629 4906 3.774766 TGATGTATTGCCCACTAGTGACT 59.225 43.478 24.68 6.20 0.00 3.41
4630 4907 4.137116 TGATGTATTGCCCACTAGTGAC 57.863 45.455 24.68 15.64 0.00 3.67
4671 4948 3.754188 ATGGAGTACACGTCGACTAAC 57.246 47.619 14.70 6.20 0.00 2.34
4707 4984 1.114627 TGTCTGGATCATCCCACGAG 58.885 55.000 0.00 0.00 35.03 4.18
4743 5020 0.387565 AAACATTGCCACCCACGAAC 59.612 50.000 0.00 0.00 0.00 3.95
4766 5043 2.582052 TCATTCGCTTTCCACCTTGTT 58.418 42.857 0.00 0.00 0.00 2.83
4834 5111 0.178861 ACTCCCACCATCCTCCAAGT 60.179 55.000 0.00 0.00 0.00 3.16
4844 5121 1.378762 GCCAAAGCTACTCCCACCA 59.621 57.895 0.00 0.00 35.50 4.17
4857 5134 1.190833 ATTGCAACATCCCCGCCAAA 61.191 50.000 0.00 0.00 0.00 3.28
4929 5206 2.438975 ATGTGCATGGTGAGCCCG 60.439 61.111 0.00 0.00 35.15 6.13
4971 5248 0.033504 CCATATCTTGACGGGGTCGG 59.966 60.000 0.00 0.00 41.39 4.79
4977 5254 3.434641 GCATGACATCCATATCTTGACGG 59.565 47.826 0.00 0.00 33.31 4.79
5030 5307 3.247411 TGCAAGTGTATCAACTCACAACG 59.753 43.478 0.00 0.00 37.07 4.10
5046 5323 0.955919 GCTTCGCTACCCTTGCAAGT 60.956 55.000 24.35 10.95 0.00 3.16
5202 5479 5.279206 GCTTTGGATCGATTCTATGAGGAGA 60.279 44.000 5.06 0.00 0.00 3.71
5251 5528 9.964303 CTTGCACATGCTATAATTAATTAACCA 57.036 29.630 11.80 9.38 42.66 3.67
5252 5529 9.965824 ACTTGCACATGCTATAATTAATTAACC 57.034 29.630 11.80 4.55 42.66 2.85
5307 5587 4.942761 ACTTAGAATCGGCCGGTTTATA 57.057 40.909 27.15 18.21 0.00 0.98
5315 5595 2.029200 GGGCTACTACTTAGAATCGGCC 60.029 54.545 0.00 0.00 36.70 6.13
5317 5597 4.341520 AGTTGGGCTACTACTTAGAATCGG 59.658 45.833 0.00 0.00 30.84 4.18
5326 5606 2.564062 TGCGTTTAGTTGGGCTACTACT 59.436 45.455 0.56 2.45 38.67 2.57
5327 5607 2.669924 GTGCGTTTAGTTGGGCTACTAC 59.330 50.000 0.56 0.00 30.62 2.73
5350 5630 3.874392 ATTTTAGCAATGCTTCGCCTT 57.126 38.095 14.85 0.00 40.44 4.35
5446 5730 4.932146 ACATGTCTAACTTGGTTTTGCAC 58.068 39.130 0.00 0.00 0.00 4.57
5692 5980 8.642432 CATCATAGTCAAGAATAGTGAACCCTA 58.358 37.037 0.00 0.00 0.00 3.53
5694 5982 7.500992 TCATCATAGTCAAGAATAGTGAACCC 58.499 38.462 0.00 0.00 0.00 4.11
5722 6010 3.368427 CGATCTGCTAACAGTTCCTTGGA 60.368 47.826 0.00 0.00 44.77 3.53
5818 6107 7.441836 TCTTGTTATGCTTCTCTTGAGTGTTA 58.558 34.615 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.