Multiple sequence alignment - TraesCS5B01G073500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G073500 chr5B 100.000 7271 0 0 1 7271 87289129 87296399 0.000000e+00 13428.0
1 TraesCS5B01G073500 chr5B 98.888 809 8 1 2575 3382 106805099 106805907 0.000000e+00 1443.0
2 TraesCS5B01G073500 chr5B 80.662 1722 260 48 4817 6499 87766345 87768032 0.000000e+00 1267.0
3 TraesCS5B01G073500 chr5B 91.387 894 69 6 3804 4692 87651260 87652150 0.000000e+00 1218.0
4 TraesCS5B01G073500 chr5B 83.693 1251 158 22 4821 6062 87652157 87653370 0.000000e+00 1138.0
5 TraesCS5B01G073500 chr5B 81.990 1377 180 35 4817 6162 87970362 87971701 0.000000e+00 1107.0
6 TraesCS5B01G073500 chr5B 88.034 819 89 4 3805 4615 87765473 87766290 0.000000e+00 961.0
7 TraesCS5B01G073500 chr5B 92.123 457 35 1 1947 2402 87764794 87765250 1.710000e-180 643.0
8 TraesCS5B01G073500 chr5B 91.466 457 38 1 1947 2402 87968620 87969076 1.720000e-175 627.0
9 TraesCS5B01G073500 chr5B 89.716 457 46 1 1947 2402 87650582 87651038 3.780000e-162 582.0
10 TraesCS5B01G073500 chr5B 88.174 482 54 2 3804 4284 87969298 87969777 8.180000e-159 571.0
11 TraesCS5B01G073500 chr5B 87.310 394 43 3 4312 4698 87969972 87970365 1.860000e-120 444.0
12 TraesCS5B01G073500 chr5B 83.249 394 43 5 1354 1745 87649933 87650305 2.510000e-89 340.0
13 TraesCS5B01G073500 chr5B 78.058 556 62 33 682 1209 87649344 87649867 5.520000e-76 296.0
14 TraesCS5B01G073500 chr5B 80.000 430 51 10 1336 1745 87967902 87968316 1.190000e-72 285.0
15 TraesCS5B01G073500 chr5B 88.208 212 20 2 1740 1947 87968341 87968551 1.570000e-61 248.0
16 TraesCS5B01G073500 chr5B 80.495 323 42 15 6201 6513 87971708 87972019 2.040000e-55 228.0
17 TraesCS5B01G073500 chr5B 91.515 165 13 1 2403 2566 87765305 87765469 7.340000e-55 226.0
18 TraesCS5B01G073500 chr5B 87.069 116 11 3 702 815 87967544 87967657 2.130000e-25 128.0
19 TraesCS5B01G073500 chr5B 85.294 102 9 5 1240 1337 87968371 87968470 4.640000e-17 100.0
20 TraesCS5B01G073500 chr5B 74.809 262 43 12 7029 7268 87768642 87768902 6.000000e-16 97.1
21 TraesCS5B01G073500 chr5B 89.831 59 4 2 1411 1468 85905717 85905660 2.810000e-09 75.0
22 TraesCS5B01G073500 chr5D 94.725 3488 129 24 3796 7271 77737869 77741313 0.000000e+00 5371.0
23 TraesCS5B01G073500 chr5D 92.711 1317 47 10 1274 2577 77736602 77737882 0.000000e+00 1855.0
24 TraesCS5B01G073500 chr5D 81.643 1716 220 53 4817 6499 78054099 78055752 0.000000e+00 1336.0
25 TraesCS5B01G073500 chr5D 90.807 892 76 5 3804 4692 78011152 78012040 0.000000e+00 1188.0
26 TraesCS5B01G073500 chr5D 83.547 1246 165 21 4820 6062 78012046 78013254 0.000000e+00 1129.0
27 TraesCS5B01G073500 chr5D 87.439 820 92 7 3805 4615 78053231 78054048 0.000000e+00 933.0
28 TraesCS5B01G073500 chr5D 91.517 613 21 10 682 1280 77735843 77736438 0.000000e+00 815.0
29 TraesCS5B01G073500 chr5D 92.779 457 32 1 1947 2402 78052552 78053008 0.000000e+00 660.0
30 TraesCS5B01G073500 chr5D 90.330 455 43 1 1949 2402 78010476 78010930 4.860000e-166 595.0
31 TraesCS5B01G073500 chr5D 82.532 395 46 6 1374 1745 78009426 78009820 7.030000e-85 326.0
32 TraesCS5B01G073500 chr5D 89.623 212 18 1 1740 1947 78052272 78052483 4.320000e-67 267.0
33 TraesCS5B01G073500 chr5D 93.333 120 8 0 4698 4817 324424532 324424413 2.080000e-40 178.0
34 TraesCS5B01G073500 chr5D 87.755 98 12 0 688 785 78051451 78051548 1.660000e-21 115.0
35 TraesCS5B01G073500 chr5D 87.209 86 8 3 1240 1324 78052303 78052386 2.160000e-15 95.3
36 TraesCS5B01G073500 chr5D 77.381 168 18 5 1337 1498 78009227 78009380 1.680000e-11 82.4
37 TraesCS5B01G073500 chr5D 88.333 60 7 0 1409 1468 76996906 76996847 1.010000e-08 73.1
38 TraesCS5B01G073500 chr5A 96.887 2281 67 4 3796 6076 74496782 74499058 0.000000e+00 3816.0
39 TraesCS5B01G073500 chr5A 92.136 1793 48 20 821 2577 74495060 74496795 0.000000e+00 2444.0
40 TraesCS5B01G073500 chr5A 94.481 1214 57 6 6064 7271 74499081 74500290 0.000000e+00 1862.0
41 TraesCS5B01G073500 chr5A 85.317 1260 151 16 4817 6062 74591885 74593124 0.000000e+00 1271.0
42 TraesCS5B01G073500 chr5A 90.111 900 80 7 3804 4698 74590993 74591888 0.000000e+00 1160.0
43 TraesCS5B01G073500 chr5A 81.851 1383 179 37 4817 6165 74673763 74675107 0.000000e+00 1098.0
44 TraesCS5B01G073500 chr5A 94.701 585 30 1 97 680 275092475 275091891 0.000000e+00 907.0
45 TraesCS5B01G073500 chr5A 86.480 821 98 7 3805 4615 74672891 74673708 0.000000e+00 889.0
46 TraesCS5B01G073500 chr5A 93.867 587 33 2 97 680 632592678 632592092 0.000000e+00 881.0
47 TraesCS5B01G073500 chr5A 92.341 457 34 1 1947 2402 74672212 74672668 0.000000e+00 649.0
48 TraesCS5B01G073500 chr5A 83.632 391 44 4 1374 1745 74589649 74590038 4.170000e-92 350.0
49 TraesCS5B01G073500 chr5A 91.515 165 13 1 2403 2566 74672723 74672887 7.340000e-55 226.0
50 TraesCS5B01G073500 chr5A 96.296 108 4 0 682 789 74494951 74495058 2.080000e-40 178.0
51 TraesCS5B01G073500 chr5A 91.781 73 6 0 713 785 74671141 74671213 1.290000e-17 102.0
52 TraesCS5B01G073500 chr1B 97.331 1199 16 1 2576 3758 280701080 280702278 0.000000e+00 2023.0
53 TraesCS5B01G073500 chr1B 93.575 1214 53 13 2576 3769 671610311 671609103 0.000000e+00 1786.0
54 TraesCS5B01G073500 chr7A 96.937 1208 16 5 2576 3763 18059574 18058368 0.000000e+00 2006.0
55 TraesCS5B01G073500 chr7A 94.530 585 30 2 98 681 181707965 181708548 0.000000e+00 902.0
56 TraesCS5B01G073500 chr7A 94.521 584 31 1 98 680 31889754 31889171 0.000000e+00 900.0
57 TraesCS5B01G073500 chr7A 93.039 589 34 6 98 684 299432487 299431904 0.000000e+00 854.0
58 TraesCS5B01G073500 chr7A 93.333 120 8 0 4698 4817 563587512 563587393 2.080000e-40 178.0
59 TraesCS5B01G073500 chr1D 93.978 1179 62 6 2576 3750 3535338 3534165 0.000000e+00 1775.0
60 TraesCS5B01G073500 chr1D 88.172 186 21 1 1955 2139 16106924 16106739 3.410000e-53 220.0
61 TraesCS5B01G073500 chr6B 94.043 1175 53 8 2575 3745 148830718 148831879 0.000000e+00 1766.0
62 TraesCS5B01G073500 chr6B 98.762 808 8 2 2576 3382 672879358 672880164 0.000000e+00 1435.0
63 TraesCS5B01G073500 chr6B 93.333 120 8 0 4698 4817 596624659 596624540 2.080000e-40 178.0
64 TraesCS5B01G073500 chr7D 93.502 1185 63 8 2575 3756 404380600 404379427 0.000000e+00 1749.0
65 TraesCS5B01G073500 chr2D 93.068 1183 60 5 2576 3750 45839602 45840770 0.000000e+00 1711.0
66 TraesCS5B01G073500 chr3B 97.069 887 10 1 2576 3446 559096383 559097269 0.000000e+00 1480.0
67 TraesCS5B01G073500 chr6A 99.007 806 8 0 2577 3382 606770688 606769883 0.000000e+00 1445.0
68 TraesCS5B01G073500 chr6A 78.602 1187 212 36 2576 3747 616107085 616108244 0.000000e+00 747.0
69 TraesCS5B01G073500 chr6A 93.333 120 8 0 4698 4817 84438480 84438361 2.080000e-40 178.0
70 TraesCS5B01G073500 chr2B 95.567 564 24 1 119 681 256961043 256961606 0.000000e+00 902.0
71 TraesCS5B01G073500 chr2B 93.333 120 8 0 4698 4817 30666284 30666403 2.080000e-40 178.0
72 TraesCS5B01G073500 chrUn 94.378 587 27 2 98 682 115038647 115039229 0.000000e+00 896.0
73 TraesCS5B01G073500 chrUn 93.333 120 8 0 4698 4817 457168620 457168501 2.080000e-40 178.0
74 TraesCS5B01G073500 chrUn 93.333 120 8 0 4698 4817 459542342 459542461 2.080000e-40 178.0
75 TraesCS5B01G073500 chr2A 93.174 586 35 4 98 680 3514501 3515084 0.000000e+00 856.0
76 TraesCS5B01G073500 chr3A 93.162 585 32 6 97 680 321109677 321109100 0.000000e+00 852.0
77 TraesCS5B01G073500 chr7B 93.424 441 19 7 3316 3753 481660003 481659570 0.000000e+00 645.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G073500 chr5B 87289129 87296399 7270 False 13428.000000 13428 100.000000 1 7271 1 chr5B.!!$F1 7270
1 TraesCS5B01G073500 chr5B 106805099 106805907 808 False 1443.000000 1443 98.888000 2575 3382 1 chr5B.!!$F2 807
2 TraesCS5B01G073500 chr5B 87649344 87653370 4026 False 714.800000 1218 85.220600 682 6062 5 chr5B.!!$F3 5380
3 TraesCS5B01G073500 chr5B 87764794 87768902 4108 False 638.820000 1267 85.428600 1947 7268 5 chr5B.!!$F4 5321
4 TraesCS5B01G073500 chr5B 87967544 87972019 4475 False 415.333333 1107 85.556222 702 6513 9 chr5B.!!$F5 5811
5 TraesCS5B01G073500 chr5D 77735843 77741313 5470 False 2680.333333 5371 92.984333 682 7271 3 chr5D.!!$F1 6589
6 TraesCS5B01G073500 chr5D 78009227 78013254 4027 False 664.080000 1188 84.919400 1337 6062 5 chr5D.!!$F2 4725
7 TraesCS5B01G073500 chr5D 78051451 78055752 4301 False 567.716667 1336 87.741333 688 6499 6 chr5D.!!$F3 5811
8 TraesCS5B01G073500 chr5A 74494951 74500290 5339 False 2075.000000 3816 94.950000 682 7271 4 chr5A.!!$F1 6589
9 TraesCS5B01G073500 chr5A 74589649 74593124 3475 False 927.000000 1271 86.353333 1374 6062 3 chr5A.!!$F2 4688
10 TraesCS5B01G073500 chr5A 275091891 275092475 584 True 907.000000 907 94.701000 97 680 1 chr5A.!!$R1 583
11 TraesCS5B01G073500 chr5A 632592092 632592678 586 True 881.000000 881 93.867000 97 680 1 chr5A.!!$R2 583
12 TraesCS5B01G073500 chr5A 74671141 74675107 3966 False 592.800000 1098 88.793600 713 6165 5 chr5A.!!$F3 5452
13 TraesCS5B01G073500 chr1B 280701080 280702278 1198 False 2023.000000 2023 97.331000 2576 3758 1 chr1B.!!$F1 1182
14 TraesCS5B01G073500 chr1B 671609103 671610311 1208 True 1786.000000 1786 93.575000 2576 3769 1 chr1B.!!$R1 1193
15 TraesCS5B01G073500 chr7A 18058368 18059574 1206 True 2006.000000 2006 96.937000 2576 3763 1 chr7A.!!$R1 1187
16 TraesCS5B01G073500 chr7A 181707965 181708548 583 False 902.000000 902 94.530000 98 681 1 chr7A.!!$F1 583
17 TraesCS5B01G073500 chr7A 31889171 31889754 583 True 900.000000 900 94.521000 98 680 1 chr7A.!!$R2 582
18 TraesCS5B01G073500 chr7A 299431904 299432487 583 True 854.000000 854 93.039000 98 684 1 chr7A.!!$R3 586
19 TraesCS5B01G073500 chr1D 3534165 3535338 1173 True 1775.000000 1775 93.978000 2576 3750 1 chr1D.!!$R1 1174
20 TraesCS5B01G073500 chr6B 148830718 148831879 1161 False 1766.000000 1766 94.043000 2575 3745 1 chr6B.!!$F1 1170
21 TraesCS5B01G073500 chr6B 672879358 672880164 806 False 1435.000000 1435 98.762000 2576 3382 1 chr6B.!!$F2 806
22 TraesCS5B01G073500 chr7D 404379427 404380600 1173 True 1749.000000 1749 93.502000 2575 3756 1 chr7D.!!$R1 1181
23 TraesCS5B01G073500 chr2D 45839602 45840770 1168 False 1711.000000 1711 93.068000 2576 3750 1 chr2D.!!$F1 1174
24 TraesCS5B01G073500 chr3B 559096383 559097269 886 False 1480.000000 1480 97.069000 2576 3446 1 chr3B.!!$F1 870
25 TraesCS5B01G073500 chr6A 606769883 606770688 805 True 1445.000000 1445 99.007000 2577 3382 1 chr6A.!!$R2 805
26 TraesCS5B01G073500 chr6A 616107085 616108244 1159 False 747.000000 747 78.602000 2576 3747 1 chr6A.!!$F1 1171
27 TraesCS5B01G073500 chr2B 256961043 256961606 563 False 902.000000 902 95.567000 119 681 1 chr2B.!!$F2 562
28 TraesCS5B01G073500 chrUn 115038647 115039229 582 False 896.000000 896 94.378000 98 682 1 chrUn.!!$F1 584
29 TraesCS5B01G073500 chr2A 3514501 3515084 583 False 856.000000 856 93.174000 98 680 1 chr2A.!!$F1 582
30 TraesCS5B01G073500 chr3A 321109100 321109677 577 True 852.000000 852 93.162000 97 680 1 chr3A.!!$R1 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.102481 CAAGCTTGCTGATGGCCATC 59.898 55.0 34.71 34.71 40.92 3.51 F
48 49 0.106167 AGCTTGCTGATGGCCATCAT 60.106 50.0 41.23 26.46 45.74 2.45 F
57 58 0.110678 ATGGCCATCATCCAGAGCTG 59.889 55.0 14.09 0.00 36.98 4.24 F
60 61 0.465824 GCCATCATCCAGAGCTGCTT 60.466 55.0 2.53 0.00 0.00 3.91 F
1133 1211 0.036388 TGGCTCTCGGCAAAGGTAAG 60.036 55.0 0.00 0.00 43.40 2.34 F
1134 1212 0.249398 GGCTCTCGGCAAAGGTAAGA 59.751 55.0 0.00 0.00 44.01 2.10 F
1138 1216 0.250513 CTCGGCAAAGGTAAGAGGCT 59.749 55.0 0.00 0.00 0.00 4.58 F
1227 1305 0.401738 TGGCTCCTTTAGTGCTTGCT 59.598 50.0 0.00 0.00 35.28 3.91 F
3774 5009 0.610687 AAAAGGAGAGAGTCGCCCTG 59.389 55.0 5.01 0.00 37.00 4.45 F
5637 7083 0.179032 TTGTGAACCGTCTGTGCCAT 60.179 50.0 0.00 0.00 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1114 1192 0.036388 CTTACCTTTGCCGAGAGCCA 60.036 55.000 0.00 0.00 42.71 4.75 R
1115 1193 0.249398 TCTTACCTTTGCCGAGAGCC 59.751 55.000 0.00 0.00 42.71 4.70 R
1119 1197 0.250513 AGCCTCTTACCTTTGCCGAG 59.749 55.000 0.00 0.00 0.00 4.63 R
1370 1448 0.399454 TTTGCAGAGAAGCAGCCTCT 59.601 50.000 0.00 0.00 46.54 3.69 R
2030 3163 0.898320 TCTGAAGGAGAGAAAGGGCG 59.102 55.000 0.00 0.00 0.00 6.13 R
2856 4053 2.520982 CTCCCCTCCGTATGCCGA 60.521 66.667 0.00 0.00 39.56 5.54 R
3770 5005 1.210478 ACTGTAATAGTGCCTGCAGGG 59.790 52.381 33.46 15.81 38.49 4.45 R
3786 5021 2.584236 AGACTACACTTCGGACACTGT 58.416 47.619 0.00 0.00 0.00 3.55 R
5731 7177 0.102120 GTCTCAGGAGCAGGATGTCG 59.898 60.000 0.00 0.00 39.31 4.35 R
7083 8833 0.036732 TGCTTCCCTGCTTGTCGAAT 59.963 50.000 0.00 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.264005 TTGGCGCTAGGTTGAGAAAA 57.736 45.000 7.64 0.00 0.00 2.29
20 21 2.264005 TGGCGCTAGGTTGAGAAAAA 57.736 45.000 7.64 0.00 0.00 1.94
21 22 2.151202 TGGCGCTAGGTTGAGAAAAAG 58.849 47.619 7.64 0.00 0.00 2.27
22 23 2.152016 GGCGCTAGGTTGAGAAAAAGT 58.848 47.619 7.64 0.00 0.00 2.66
23 24 2.159824 GGCGCTAGGTTGAGAAAAAGTC 59.840 50.000 7.64 0.00 0.00 3.01
24 25 2.159824 GCGCTAGGTTGAGAAAAAGTCC 59.840 50.000 0.00 0.00 0.00 3.85
25 26 2.742589 CGCTAGGTTGAGAAAAAGTCCC 59.257 50.000 0.00 0.00 0.00 4.46
26 27 3.082548 GCTAGGTTGAGAAAAAGTCCCC 58.917 50.000 0.00 0.00 0.00 4.81
27 28 2.677542 AGGTTGAGAAAAAGTCCCCC 57.322 50.000 0.00 0.00 0.00 5.40
28 29 1.856920 AGGTTGAGAAAAAGTCCCCCA 59.143 47.619 0.00 0.00 0.00 4.96
29 30 2.246327 AGGTTGAGAAAAAGTCCCCCAA 59.754 45.455 0.00 0.00 0.00 4.12
30 31 2.628178 GGTTGAGAAAAAGTCCCCCAAG 59.372 50.000 0.00 0.00 0.00 3.61
31 32 1.995376 TGAGAAAAAGTCCCCCAAGC 58.005 50.000 0.00 0.00 0.00 4.01
32 33 1.499007 TGAGAAAAAGTCCCCCAAGCT 59.501 47.619 0.00 0.00 0.00 3.74
33 34 2.091333 TGAGAAAAAGTCCCCCAAGCTT 60.091 45.455 0.00 0.00 0.00 3.74
34 35 2.297315 GAGAAAAAGTCCCCCAAGCTTG 59.703 50.000 19.93 19.93 0.00 4.01
35 36 0.758734 AAAAAGTCCCCCAAGCTTGC 59.241 50.000 21.43 6.92 0.00 4.01
36 37 0.105504 AAAAGTCCCCCAAGCTTGCT 60.106 50.000 21.43 9.26 0.00 3.91
37 38 0.829182 AAAGTCCCCCAAGCTTGCTG 60.829 55.000 21.43 13.43 0.00 4.41
38 39 1.719063 AAGTCCCCCAAGCTTGCTGA 61.719 55.000 21.43 13.04 0.00 4.26
39 40 1.000396 GTCCCCCAAGCTTGCTGAT 60.000 57.895 21.43 0.00 0.00 2.90
40 41 1.000521 TCCCCCAAGCTTGCTGATG 60.001 57.895 21.43 6.80 0.00 3.07
41 42 2.056223 CCCCCAAGCTTGCTGATGG 61.056 63.158 21.43 15.43 0.00 3.51
42 43 2.718073 CCCCAAGCTTGCTGATGGC 61.718 63.158 21.43 0.00 42.22 4.40
43 44 2.718073 CCCAAGCTTGCTGATGGCC 61.718 63.158 21.43 0.00 40.92 5.36
44 45 1.980232 CCAAGCTTGCTGATGGCCA 60.980 57.895 21.43 8.56 40.92 5.36
45 46 1.327690 CCAAGCTTGCTGATGGCCAT 61.328 55.000 20.96 20.96 40.92 4.40
46 47 0.102481 CAAGCTTGCTGATGGCCATC 59.898 55.000 34.71 34.71 40.92 3.51
47 48 0.323999 AAGCTTGCTGATGGCCATCA 60.324 50.000 39.20 39.20 44.83 3.07
48 49 0.106167 AGCTTGCTGATGGCCATCAT 60.106 50.000 41.23 26.46 45.74 2.45
55 56 2.944075 GATGGCCATCATCCAGAGC 58.056 57.895 35.93 10.08 44.92 4.09
56 57 0.400975 GATGGCCATCATCCAGAGCT 59.599 55.000 35.93 3.49 44.92 4.09
57 58 0.110678 ATGGCCATCATCCAGAGCTG 59.889 55.000 14.09 0.00 36.98 4.24
58 59 1.897615 GGCCATCATCCAGAGCTGC 60.898 63.158 0.00 0.00 0.00 5.25
59 60 1.148723 GCCATCATCCAGAGCTGCT 59.851 57.895 0.00 0.00 0.00 4.24
60 61 0.465824 GCCATCATCCAGAGCTGCTT 60.466 55.000 2.53 0.00 0.00 3.91
61 62 2.022754 GCCATCATCCAGAGCTGCTTT 61.023 52.381 2.53 0.00 0.00 3.51
62 63 1.676529 CCATCATCCAGAGCTGCTTTG 59.323 52.381 12.85 12.85 0.00 2.77
63 64 1.676529 CATCATCCAGAGCTGCTTTGG 59.323 52.381 28.19 28.19 37.12 3.28
64 65 0.986527 TCATCCAGAGCTGCTTTGGA 59.013 50.000 35.12 35.12 46.38 3.53
67 68 2.698855 TCCAGAGCTGCTTTGGATAC 57.301 50.000 31.37 6.02 39.39 2.24
68 69 2.191400 TCCAGAGCTGCTTTGGATACT 58.809 47.619 31.37 8.27 39.39 2.12
69 70 2.573462 TCCAGAGCTGCTTTGGATACTT 59.427 45.455 31.37 0.00 39.39 2.24
70 71 3.774766 TCCAGAGCTGCTTTGGATACTTA 59.225 43.478 31.37 13.59 39.39 2.24
71 72 4.225042 TCCAGAGCTGCTTTGGATACTTAA 59.775 41.667 31.37 12.94 39.39 1.85
72 73 4.943705 CCAGAGCTGCTTTGGATACTTAAA 59.056 41.667 29.72 0.00 37.88 1.52
73 74 5.163713 CCAGAGCTGCTTTGGATACTTAAAC 60.164 44.000 29.72 0.33 37.88 2.01
74 75 4.631813 AGAGCTGCTTTGGATACTTAAACG 59.368 41.667 2.53 0.00 37.61 3.60
75 76 4.575885 AGCTGCTTTGGATACTTAAACGA 58.424 39.130 0.00 0.00 37.61 3.85
76 77 5.186198 AGCTGCTTTGGATACTTAAACGAT 58.814 37.500 0.00 0.00 37.61 3.73
77 78 5.065218 AGCTGCTTTGGATACTTAAACGATG 59.935 40.000 0.00 0.00 37.61 3.84
78 79 5.163754 GCTGCTTTGGATACTTAAACGATGT 60.164 40.000 0.00 0.00 37.61 3.06
79 80 6.622896 GCTGCTTTGGATACTTAAACGATGTT 60.623 38.462 0.00 0.00 37.61 2.71
80 81 7.413657 GCTGCTTTGGATACTTAAACGATGTTA 60.414 37.037 0.00 0.00 37.61 2.41
81 82 8.500753 TGCTTTGGATACTTAAACGATGTTAT 57.499 30.769 0.00 0.00 37.61 1.89
82 83 8.952278 TGCTTTGGATACTTAAACGATGTTATT 58.048 29.630 0.00 0.00 37.61 1.40
83 84 9.783256 GCTTTGGATACTTAAACGATGTTATTT 57.217 29.630 0.00 0.00 37.61 1.40
86 87 8.215926 TGGATACTTAAACGATGTTATTTGGG 57.784 34.615 0.00 0.00 37.61 4.12
87 88 7.136772 GGATACTTAAACGATGTTATTTGGGC 58.863 38.462 0.00 0.00 0.00 5.36
88 89 7.012989 GGATACTTAAACGATGTTATTTGGGCT 59.987 37.037 0.00 0.00 0.00 5.19
89 90 5.949735 ACTTAAACGATGTTATTTGGGCTG 58.050 37.500 0.00 0.00 0.00 4.85
90 91 2.939460 AACGATGTTATTTGGGCTGC 57.061 45.000 0.00 0.00 0.00 5.25
91 92 2.128771 ACGATGTTATTTGGGCTGCT 57.871 45.000 0.00 0.00 0.00 4.24
92 93 1.745087 ACGATGTTATTTGGGCTGCTG 59.255 47.619 0.00 0.00 0.00 4.41
93 94 2.016318 CGATGTTATTTGGGCTGCTGA 58.984 47.619 0.00 0.00 0.00 4.26
94 95 2.223340 CGATGTTATTTGGGCTGCTGAC 60.223 50.000 0.00 0.00 0.00 3.51
95 96 2.584835 TGTTATTTGGGCTGCTGACT 57.415 45.000 0.00 0.00 0.00 3.41
133 134 6.317140 GGATACTTGGATACGTATCGGATACA 59.683 42.308 25.21 16.01 39.52 2.29
490 498 0.682852 AGGGGATTTCACGTCGAACA 59.317 50.000 0.00 0.00 31.73 3.18
511 519 4.202781 ACAAGGGGTTTCAGGTATCCAAAT 60.203 41.667 0.00 0.00 0.00 2.32
533 541 4.891260 TCGTATCGCAGAAGTATCCTAGA 58.109 43.478 0.00 0.00 43.58 2.43
791 803 1.153469 GAGGCTCAGCTGTACTGCC 60.153 63.158 24.17 24.17 46.76 4.85
796 808 2.816958 CAGCTGTACTGCCCTGCG 60.817 66.667 19.81 1.94 40.19 5.18
798 810 1.982395 AGCTGTACTGCCCTGCGTA 60.982 57.895 19.81 0.00 32.68 4.42
799 811 1.810030 GCTGTACTGCCCTGCGTAC 60.810 63.158 13.37 11.52 38.22 3.67
865 888 1.475930 GCTCCCTTATCTCCTTGGCAC 60.476 57.143 0.00 0.00 0.00 5.01
961 1013 4.375272 TCTGCAACTCTCTGAAGACTTTG 58.625 43.478 0.00 0.00 0.00 2.77
976 1028 3.318275 AGACTTTGCACGTGAGACTCTTA 59.682 43.478 22.23 0.00 0.00 2.10
1101 1179 3.064324 GGCATTGTGGCCGCTTCT 61.064 61.111 18.96 0.00 45.40 2.85
1102 1180 2.486966 GCATTGTGGCCGCTTCTC 59.513 61.111 18.96 0.56 0.00 2.87
1103 1181 2.042831 GCATTGTGGCCGCTTCTCT 61.043 57.895 18.96 0.00 0.00 3.10
1104 1182 1.798735 CATTGTGGCCGCTTCTCTG 59.201 57.895 18.96 3.97 0.00 3.35
1105 1183 2.042831 ATTGTGGCCGCTTCTCTGC 61.043 57.895 18.96 0.00 0.00 4.26
1106 1184 2.753009 ATTGTGGCCGCTTCTCTGCA 62.753 55.000 18.96 0.00 0.00 4.41
1107 1185 3.123620 GTGGCCGCTTCTCTGCAG 61.124 66.667 9.68 7.63 0.00 4.41
1108 1186 3.313524 TGGCCGCTTCTCTGCAGA 61.314 61.111 17.19 17.19 0.00 4.26
1109 1187 2.046892 GGCCGCTTCTCTGCAGAA 60.047 61.111 18.85 2.48 37.11 3.02
1118 1196 3.988976 TTCTCTGCAGAAGTATTGGCT 57.011 42.857 18.85 0.00 33.38 4.75
1119 1197 3.533606 TCTCTGCAGAAGTATTGGCTC 57.466 47.619 18.85 0.00 0.00 4.70
1120 1198 3.102972 TCTCTGCAGAAGTATTGGCTCT 58.897 45.455 18.85 0.00 0.00 4.09
1121 1199 3.131933 TCTCTGCAGAAGTATTGGCTCTC 59.868 47.826 18.85 0.00 0.00 3.20
1122 1200 2.159184 TCTGCAGAAGTATTGGCTCTCG 60.159 50.000 15.67 0.00 0.00 4.04
1123 1201 1.134699 TGCAGAAGTATTGGCTCTCGG 60.135 52.381 0.00 0.00 0.00 4.63
1124 1202 1.576356 CAGAAGTATTGGCTCTCGGC 58.424 55.000 0.00 0.00 40.90 5.54
1125 1203 1.134699 CAGAAGTATTGGCTCTCGGCA 60.135 52.381 0.00 0.00 44.83 5.69
1131 1209 3.800188 TGGCTCTCGGCAAAGGTA 58.200 55.556 0.00 0.00 43.40 3.08
1132 1210 2.062922 TGGCTCTCGGCAAAGGTAA 58.937 52.632 0.00 0.00 43.40 2.85
1133 1211 0.036388 TGGCTCTCGGCAAAGGTAAG 60.036 55.000 0.00 0.00 43.40 2.34
1134 1212 0.249398 GGCTCTCGGCAAAGGTAAGA 59.751 55.000 0.00 0.00 44.01 2.10
1135 1213 1.646189 GCTCTCGGCAAAGGTAAGAG 58.354 55.000 0.00 0.00 41.35 2.85
1136 1214 1.740718 GCTCTCGGCAAAGGTAAGAGG 60.741 57.143 0.00 0.00 41.35 3.69
1137 1215 0.249398 TCTCGGCAAAGGTAAGAGGC 59.751 55.000 0.00 0.00 0.00 4.70
1138 1216 0.250513 CTCGGCAAAGGTAAGAGGCT 59.749 55.000 0.00 0.00 0.00 4.58
1139 1217 0.690762 TCGGCAAAGGTAAGAGGCTT 59.309 50.000 0.00 0.00 0.00 4.35
1140 1218 1.087501 CGGCAAAGGTAAGAGGCTTC 58.912 55.000 0.00 0.00 0.00 3.86
1141 1219 1.339151 CGGCAAAGGTAAGAGGCTTCT 60.339 52.381 0.00 0.00 34.29 2.85
1142 1220 2.087646 GGCAAAGGTAAGAGGCTTCTG 58.912 52.381 0.00 0.00 32.79 3.02
1143 1221 2.087646 GCAAAGGTAAGAGGCTTCTGG 58.912 52.381 0.00 0.00 32.79 3.86
1144 1222 2.553247 GCAAAGGTAAGAGGCTTCTGGT 60.553 50.000 0.00 0.00 32.79 4.00
1145 1223 3.756117 CAAAGGTAAGAGGCTTCTGGTT 58.244 45.455 0.00 0.00 32.79 3.67
1146 1224 4.145052 CAAAGGTAAGAGGCTTCTGGTTT 58.855 43.478 0.00 0.00 32.79 3.27
1147 1225 4.455070 AAGGTAAGAGGCTTCTGGTTTT 57.545 40.909 0.00 0.00 32.79 2.43
1148 1226 4.455070 AGGTAAGAGGCTTCTGGTTTTT 57.545 40.909 0.00 0.00 32.79 1.94
1149 1227 4.399219 AGGTAAGAGGCTTCTGGTTTTTC 58.601 43.478 0.00 0.00 32.79 2.29
1150 1228 4.104897 AGGTAAGAGGCTTCTGGTTTTTCT 59.895 41.667 0.00 0.00 32.79 2.52
1151 1229 5.309806 AGGTAAGAGGCTTCTGGTTTTTCTA 59.690 40.000 0.00 0.00 32.79 2.10
1152 1230 5.411977 GGTAAGAGGCTTCTGGTTTTTCTAC 59.588 44.000 0.00 0.00 32.79 2.59
1153 1231 4.984146 AGAGGCTTCTGGTTTTTCTACT 57.016 40.909 0.00 0.00 30.72 2.57
1154 1232 5.311844 AGAGGCTTCTGGTTTTTCTACTT 57.688 39.130 0.00 0.00 30.72 2.24
1155 1233 5.696030 AGAGGCTTCTGGTTTTTCTACTTT 58.304 37.500 0.00 0.00 30.72 2.66
1156 1234 5.765677 AGAGGCTTCTGGTTTTTCTACTTTC 59.234 40.000 0.00 0.00 30.72 2.62
1157 1235 5.696030 AGGCTTCTGGTTTTTCTACTTTCT 58.304 37.500 0.00 0.00 0.00 2.52
1158 1236 6.838382 AGGCTTCTGGTTTTTCTACTTTCTA 58.162 36.000 0.00 0.00 0.00 2.10
1159 1237 6.711194 AGGCTTCTGGTTTTTCTACTTTCTAC 59.289 38.462 0.00 0.00 0.00 2.59
1160 1238 6.711194 GGCTTCTGGTTTTTCTACTTTCTACT 59.289 38.462 0.00 0.00 0.00 2.57
1161 1239 7.876582 GGCTTCTGGTTTTTCTACTTTCTACTA 59.123 37.037 0.00 0.00 0.00 1.82
1162 1240 8.710551 GCTTCTGGTTTTTCTACTTTCTACTAC 58.289 37.037 0.00 0.00 0.00 2.73
1163 1241 9.760077 CTTCTGGTTTTTCTACTTTCTACTACA 57.240 33.333 0.00 0.00 0.00 2.74
1165 1243 9.924650 TCTGGTTTTTCTACTTTCTACTACATC 57.075 33.333 0.00 0.00 0.00 3.06
1166 1244 9.152595 CTGGTTTTTCTACTTTCTACTACATCC 57.847 37.037 0.00 0.00 0.00 3.51
1167 1245 8.877195 TGGTTTTTCTACTTTCTACTACATCCT 58.123 33.333 0.00 0.00 0.00 3.24
1168 1246 9.722184 GGTTTTTCTACTTTCTACTACATCCTT 57.278 33.333 0.00 0.00 0.00 3.36
1173 1251 8.223177 TCTACTTTCTACTACATCCTTAGTGC 57.777 38.462 0.00 0.00 34.10 4.40
1174 1252 6.852420 ACTTTCTACTACATCCTTAGTGCA 57.148 37.500 0.00 0.00 34.10 4.57
1175 1253 7.425224 ACTTTCTACTACATCCTTAGTGCAT 57.575 36.000 0.00 0.00 34.10 3.96
1176 1254 8.534954 ACTTTCTACTACATCCTTAGTGCATA 57.465 34.615 0.00 0.00 34.10 3.14
1177 1255 8.978472 ACTTTCTACTACATCCTTAGTGCATAA 58.022 33.333 0.00 0.00 34.10 1.90
1178 1256 9.817809 CTTTCTACTACATCCTTAGTGCATAAA 57.182 33.333 0.00 0.00 34.10 1.40
1179 1257 9.595823 TTTCTACTACATCCTTAGTGCATAAAC 57.404 33.333 0.00 0.00 34.10 2.01
1180 1258 8.534954 TCTACTACATCCTTAGTGCATAAACT 57.465 34.615 0.00 0.00 34.10 2.66
1181 1259 8.978472 TCTACTACATCCTTAGTGCATAAACTT 58.022 33.333 0.00 0.00 34.10 2.66
1182 1260 7.849804 ACTACATCCTTAGTGCATAAACTTG 57.150 36.000 0.00 0.00 30.75 3.16
1183 1261 7.620880 ACTACATCCTTAGTGCATAAACTTGA 58.379 34.615 0.00 0.00 30.75 3.02
1184 1262 8.267894 ACTACATCCTTAGTGCATAAACTTGAT 58.732 33.333 0.00 0.00 30.75 2.57
1185 1263 9.764363 CTACATCCTTAGTGCATAAACTTGATA 57.236 33.333 0.00 0.00 0.00 2.15
1186 1264 8.438676 ACATCCTTAGTGCATAAACTTGATAC 57.561 34.615 0.00 0.00 0.00 2.24
1187 1265 8.267894 ACATCCTTAGTGCATAAACTTGATACT 58.732 33.333 0.00 0.00 0.00 2.12
1188 1266 9.113838 CATCCTTAGTGCATAAACTTGATACTT 57.886 33.333 0.00 0.00 0.00 2.24
1189 1267 8.718102 TCCTTAGTGCATAAACTTGATACTTC 57.282 34.615 0.00 0.00 0.00 3.01
1190 1268 8.540388 TCCTTAGTGCATAAACTTGATACTTCT 58.460 33.333 0.00 0.00 0.00 2.85
1191 1269 9.167311 CCTTAGTGCATAAACTTGATACTTCTT 57.833 33.333 0.00 0.00 0.00 2.52
1194 1272 7.820648 AGTGCATAAACTTGATACTTCTTTGG 58.179 34.615 0.00 0.00 0.00 3.28
1195 1273 7.665559 AGTGCATAAACTTGATACTTCTTTGGA 59.334 33.333 0.00 0.00 0.00 3.53
1196 1274 8.462016 GTGCATAAACTTGATACTTCTTTGGAT 58.538 33.333 0.00 0.00 0.00 3.41
1197 1275 8.677300 TGCATAAACTTGATACTTCTTTGGATC 58.323 33.333 0.00 0.00 0.00 3.36
1198 1276 8.897752 GCATAAACTTGATACTTCTTTGGATCT 58.102 33.333 0.00 0.00 0.00 2.75
1201 1279 8.697507 AAACTTGATACTTCTTTGGATCTTGT 57.302 30.769 0.00 0.00 0.00 3.16
1202 1280 8.697507 AACTTGATACTTCTTTGGATCTTGTT 57.302 30.769 0.00 0.00 0.00 2.83
1203 1281 8.697507 ACTTGATACTTCTTTGGATCTTGTTT 57.302 30.769 0.00 0.00 0.00 2.83
1204 1282 9.793259 ACTTGATACTTCTTTGGATCTTGTTTA 57.207 29.630 0.00 0.00 0.00 2.01
1207 1285 9.177608 TGATACTTCTTTGGATCTTGTTTATGG 57.822 33.333 0.00 0.00 0.00 2.74
1208 1286 9.178758 GATACTTCTTTGGATCTTGTTTATGGT 57.821 33.333 0.00 0.00 0.00 3.55
1209 1287 7.219484 ACTTCTTTGGATCTTGTTTATGGTG 57.781 36.000 0.00 0.00 0.00 4.17
1210 1288 6.209391 ACTTCTTTGGATCTTGTTTATGGTGG 59.791 38.462 0.00 0.00 0.00 4.61
1211 1289 4.462483 TCTTTGGATCTTGTTTATGGTGGC 59.538 41.667 0.00 0.00 0.00 5.01
1212 1290 3.737559 TGGATCTTGTTTATGGTGGCT 57.262 42.857 0.00 0.00 0.00 4.75
1213 1291 3.620488 TGGATCTTGTTTATGGTGGCTC 58.380 45.455 0.00 0.00 0.00 4.70
1214 1292 2.952310 GGATCTTGTTTATGGTGGCTCC 59.048 50.000 0.00 0.00 0.00 4.70
1215 1293 3.372025 GGATCTTGTTTATGGTGGCTCCT 60.372 47.826 7.19 0.00 37.07 3.69
1216 1294 3.806949 TCTTGTTTATGGTGGCTCCTT 57.193 42.857 7.19 3.16 37.07 3.36
1217 1295 4.112634 TCTTGTTTATGGTGGCTCCTTT 57.887 40.909 7.19 0.00 37.07 3.11
1218 1296 5.249780 TCTTGTTTATGGTGGCTCCTTTA 57.750 39.130 7.19 0.00 37.07 1.85
1219 1297 5.253330 TCTTGTTTATGGTGGCTCCTTTAG 58.747 41.667 7.19 0.00 37.07 1.85
1220 1298 4.650972 TGTTTATGGTGGCTCCTTTAGT 57.349 40.909 7.19 0.00 37.07 2.24
1221 1299 4.331968 TGTTTATGGTGGCTCCTTTAGTG 58.668 43.478 7.19 0.00 37.07 2.74
1222 1300 2.710096 TATGGTGGCTCCTTTAGTGC 57.290 50.000 7.19 0.00 37.07 4.40
1223 1301 0.995024 ATGGTGGCTCCTTTAGTGCT 59.005 50.000 7.19 0.00 35.28 4.40
1224 1302 0.771127 TGGTGGCTCCTTTAGTGCTT 59.229 50.000 7.19 0.00 35.28 3.91
1225 1303 1.168714 GGTGGCTCCTTTAGTGCTTG 58.831 55.000 0.00 0.00 35.28 4.01
1226 1304 0.523519 GTGGCTCCTTTAGTGCTTGC 59.476 55.000 0.00 0.00 35.28 4.01
1227 1305 0.401738 TGGCTCCTTTAGTGCTTGCT 59.598 50.000 0.00 0.00 35.28 3.91
1228 1306 1.202927 TGGCTCCTTTAGTGCTTGCTT 60.203 47.619 0.00 0.00 35.28 3.91
1229 1307 1.200948 GGCTCCTTTAGTGCTTGCTTG 59.799 52.381 0.00 0.00 35.28 4.01
1230 1308 1.402062 GCTCCTTTAGTGCTTGCTTGC 60.402 52.381 0.00 0.00 32.10 4.01
1231 1309 1.881973 CTCCTTTAGTGCTTGCTTGCA 59.118 47.619 0.27 0.27 41.05 4.08
1232 1310 2.490903 CTCCTTTAGTGCTTGCTTGCAT 59.509 45.455 7.39 1.17 45.23 3.96
1233 1311 3.684908 TCCTTTAGTGCTTGCTTGCATA 58.315 40.909 7.39 0.40 45.23 3.14
1234 1312 3.691118 TCCTTTAGTGCTTGCTTGCATAG 59.309 43.478 7.39 0.00 45.23 2.23
1246 1324 4.972514 GCTTGCATAGCTTACTTTCCTT 57.027 40.909 11.98 0.00 46.77 3.36
1247 1325 5.316327 GCTTGCATAGCTTACTTTCCTTT 57.684 39.130 11.98 0.00 46.77 3.11
1248 1326 5.098211 GCTTGCATAGCTTACTTTCCTTTG 58.902 41.667 11.98 0.00 46.77 2.77
1249 1327 5.106157 GCTTGCATAGCTTACTTTCCTTTGA 60.106 40.000 11.98 0.00 46.77 2.69
1250 1328 6.405176 GCTTGCATAGCTTACTTTCCTTTGAT 60.405 38.462 11.98 0.00 46.77 2.57
1251 1329 7.466746 TTGCATAGCTTACTTTCCTTTGATT 57.533 32.000 0.00 0.00 0.00 2.57
1252 1330 7.466746 TGCATAGCTTACTTTCCTTTGATTT 57.533 32.000 0.00 0.00 0.00 2.17
1253 1331 7.895759 TGCATAGCTTACTTTCCTTTGATTTT 58.104 30.769 0.00 0.00 0.00 1.82
1254 1332 8.367156 TGCATAGCTTACTTTCCTTTGATTTTT 58.633 29.630 0.00 0.00 0.00 1.94
1255 1333 8.864024 GCATAGCTTACTTTCCTTTGATTTTTC 58.136 33.333 0.00 0.00 0.00 2.29
1258 1336 8.237811 AGCTTACTTTCCTTTGATTTTTCTGA 57.762 30.769 0.00 0.00 0.00 3.27
1259 1337 8.138074 AGCTTACTTTCCTTTGATTTTTCTGAC 58.862 33.333 0.00 0.00 0.00 3.51
1260 1338 7.920682 GCTTACTTTCCTTTGATTTTTCTGACA 59.079 33.333 0.00 0.00 0.00 3.58
1261 1339 9.971922 CTTACTTTCCTTTGATTTTTCTGACAT 57.028 29.630 0.00 0.00 0.00 3.06
1262 1340 9.965824 TTACTTTCCTTTGATTTTTCTGACATC 57.034 29.630 0.00 0.00 0.00 3.06
1263 1341 8.010733 ACTTTCCTTTGATTTTTCTGACATCA 57.989 30.769 0.00 0.00 0.00 3.07
1264 1342 8.477256 ACTTTCCTTTGATTTTTCTGACATCAA 58.523 29.630 3.22 3.22 35.56 2.57
1265 1343 9.316730 CTTTCCTTTGATTTTTCTGACATCAAA 57.683 29.630 13.86 13.86 42.13 2.69
1266 1344 9.835389 TTTCCTTTGATTTTTCTGACATCAAAT 57.165 25.926 14.51 2.71 42.94 2.32
1276 1354 9.970395 TTTTTCTGACATCAAATATATGCATCC 57.030 29.630 0.19 0.00 0.00 3.51
1277 1355 8.694581 TTTCTGACATCAAATATATGCATCCA 57.305 30.769 0.19 0.00 0.00 3.41
1278 1356 8.873186 TTCTGACATCAAATATATGCATCCAT 57.127 30.769 0.19 0.00 35.44 3.41
1279 1357 8.276252 TCTGACATCAAATATATGCATCCATG 57.724 34.615 0.19 0.00 32.85 3.66
1280 1358 7.886446 TCTGACATCAAATATATGCATCCATGT 59.114 33.333 0.19 2.27 32.85 3.21
1281 1359 7.822658 TGACATCAAATATATGCATCCATGTG 58.177 34.615 0.19 3.28 32.85 3.21
1282 1360 7.666388 TGACATCAAATATATGCATCCATGTGA 59.334 33.333 0.19 9.06 32.85 3.58
1283 1361 8.411991 ACATCAAATATATGCATCCATGTGAA 57.588 30.769 14.23 2.99 32.85 3.18
1284 1362 9.031537 ACATCAAATATATGCATCCATGTGAAT 57.968 29.630 14.23 6.31 32.85 2.57
1285 1363 9.869757 CATCAAATATATGCATCCATGTGAATT 57.130 29.630 14.23 1.14 32.85 2.17
1287 1365 9.699703 TCAAATATATGCATCCATGTGAATTTG 57.300 29.630 0.19 5.87 33.91 2.32
1288 1366 8.931775 CAAATATATGCATCCATGTGAATTTGG 58.068 33.333 0.19 0.00 31.94 3.28
1289 1367 8.425237 AATATATGCATCCATGTGAATTTGGA 57.575 30.769 0.19 0.00 32.85 3.53
1290 1368 6.734502 ATATGCATCCATGTGAATTTGGAA 57.265 33.333 0.19 0.00 33.78 3.53
1291 1369 4.191033 TGCATCCATGTGAATTTGGAAC 57.809 40.909 0.78 0.00 33.78 3.62
1292 1370 3.577415 TGCATCCATGTGAATTTGGAACA 59.423 39.130 0.78 0.89 33.78 3.18
1293 1371 4.178540 GCATCCATGTGAATTTGGAACAG 58.821 43.478 0.78 0.00 42.39 3.16
1294 1372 4.082081 GCATCCATGTGAATTTGGAACAGA 60.082 41.667 0.78 0.00 42.39 3.41
1295 1373 5.404946 CATCCATGTGAATTTGGAACAGAC 58.595 41.667 0.78 0.00 42.39 3.51
1296 1374 4.728772 TCCATGTGAATTTGGAACAGACT 58.271 39.130 0.00 0.00 42.39 3.24
1297 1375 4.520111 TCCATGTGAATTTGGAACAGACTG 59.480 41.667 0.00 0.00 42.39 3.51
1298 1376 3.988379 TGTGAATTTGGAACAGACTGC 57.012 42.857 1.25 0.00 42.39 4.40
1299 1377 3.554934 TGTGAATTTGGAACAGACTGCT 58.445 40.909 1.25 0.00 42.39 4.24
1301 1379 3.565482 GTGAATTTGGAACAGACTGCTGA 59.435 43.478 1.25 0.00 45.17 4.26
1302 1380 4.217118 GTGAATTTGGAACAGACTGCTGAT 59.783 41.667 1.25 0.00 45.17 2.90
1303 1381 5.412594 GTGAATTTGGAACAGACTGCTGATA 59.587 40.000 1.25 0.00 45.17 2.15
1304 1382 6.003326 TGAATTTGGAACAGACTGCTGATAA 58.997 36.000 1.25 0.00 45.17 1.75
1305 1383 5.886960 ATTTGGAACAGACTGCTGATAAC 57.113 39.130 1.25 0.00 45.17 1.89
1306 1384 4.350368 TTGGAACAGACTGCTGATAACA 57.650 40.909 1.25 0.00 45.17 2.41
1307 1385 4.350368 TGGAACAGACTGCTGATAACAA 57.650 40.909 1.25 0.00 45.17 2.83
1308 1386 4.713553 TGGAACAGACTGCTGATAACAAA 58.286 39.130 1.25 0.00 45.17 2.83
1309 1387 5.316167 TGGAACAGACTGCTGATAACAAAT 58.684 37.500 1.25 0.00 45.17 2.32
1310 1388 6.472016 TGGAACAGACTGCTGATAACAAATA 58.528 36.000 1.25 0.00 45.17 1.40
1311 1389 6.371548 TGGAACAGACTGCTGATAACAAATAC 59.628 38.462 1.25 0.00 45.17 1.89
1312 1390 6.595716 GGAACAGACTGCTGATAACAAATACT 59.404 38.462 1.25 0.00 45.17 2.12
1313 1391 6.974932 ACAGACTGCTGATAACAAATACTG 57.025 37.500 1.25 0.00 45.17 2.74
1314 1392 5.352569 ACAGACTGCTGATAACAAATACTGC 59.647 40.000 1.25 0.00 45.17 4.40
1315 1393 5.583854 CAGACTGCTGATAACAAATACTGCT 59.416 40.000 0.00 0.00 45.17 4.24
1316 1394 6.758416 CAGACTGCTGATAACAAATACTGCTA 59.242 38.462 0.00 0.00 45.17 3.49
1317 1395 6.758886 AGACTGCTGATAACAAATACTGCTAC 59.241 38.462 0.00 0.00 0.00 3.58
1318 1396 6.644347 ACTGCTGATAACAAATACTGCTACT 58.356 36.000 0.00 0.00 0.00 2.57
1319 1397 7.106239 ACTGCTGATAACAAATACTGCTACTT 58.894 34.615 0.00 0.00 0.00 2.24
1320 1398 7.278868 ACTGCTGATAACAAATACTGCTACTTC 59.721 37.037 0.00 0.00 0.00 3.01
1321 1399 7.102993 TGCTGATAACAAATACTGCTACTTCA 58.897 34.615 0.00 0.00 0.00 3.02
1322 1400 7.770433 TGCTGATAACAAATACTGCTACTTCAT 59.230 33.333 0.00 0.00 0.00 2.57
1323 1401 8.279103 GCTGATAACAAATACTGCTACTTCATC 58.721 37.037 0.00 0.00 0.00 2.92
1324 1402 8.662781 TGATAACAAATACTGCTACTTCATCC 57.337 34.615 0.00 0.00 0.00 3.51
1325 1403 8.486210 TGATAACAAATACTGCTACTTCATCCT 58.514 33.333 0.00 0.00 0.00 3.24
1326 1404 9.982651 GATAACAAATACTGCTACTTCATCCTA 57.017 33.333 0.00 0.00 0.00 2.94
1329 1407 9.686683 AACAAATACTGCTACTTCATCCTATTT 57.313 29.630 0.00 0.00 0.00 1.40
1330 1408 9.686683 ACAAATACTGCTACTTCATCCTATTTT 57.313 29.630 0.00 0.00 0.00 1.82
1334 1412 6.292150 ACTGCTACTTCATCCTATTTTAGGC 58.708 40.000 0.00 0.00 45.82 3.93
1338 1416 5.379706 ACTTCATCCTATTTTAGGCTGCT 57.620 39.130 0.00 0.00 45.82 4.24
1391 1956 1.817447 GAGGCTGCTTCTCTGCAAAAT 59.183 47.619 4.32 0.00 42.83 1.82
1397 1962 5.404946 GCTGCTTCTCTGCAAAATTATTGA 58.595 37.500 0.00 0.00 42.83 2.57
1398 1963 6.040878 GCTGCTTCTCTGCAAAATTATTGAT 58.959 36.000 0.00 0.00 42.83 2.57
1582 2199 7.201461 CGTTTTTCTTTGATTTATCTGGCATGG 60.201 37.037 0.00 0.00 0.00 3.66
1588 2205 8.659527 TCTTTGATTTATCTGGCATGGAGTATA 58.340 33.333 0.00 0.00 0.00 1.47
1902 2966 4.467082 TCTTGATTCCCCACCATTTTGATG 59.533 41.667 0.00 0.00 0.00 3.07
1907 2971 3.364549 TCCCCACCATTTTGATGACATC 58.635 45.455 8.59 8.59 0.00 3.06
2030 3163 2.036256 AAGCCCTGGTGCATGGAC 59.964 61.111 9.16 9.16 0.00 4.02
2183 3318 6.149575 GCTAGAAGCTCCTGATGGAAACATT 61.150 44.000 0.00 0.00 44.92 2.71
2199 3334 7.546358 TGGAAACATTTACAATATTCAGGCTG 58.454 34.615 8.58 8.58 33.40 4.85
2570 3760 3.824443 TCCTGACGTCTTGATGAAGTGTA 59.176 43.478 17.92 0.00 37.51 2.90
2571 3761 4.082733 TCCTGACGTCTTGATGAAGTGTAG 60.083 45.833 17.92 0.33 37.51 2.74
2572 3762 4.321304 CCTGACGTCTTGATGAAGTGTAGT 60.321 45.833 17.92 0.00 37.51 2.73
2573 3763 4.795268 TGACGTCTTGATGAAGTGTAGTC 58.205 43.478 17.92 0.00 37.51 2.59
3763 4998 2.494073 GCGAGAGGAGAAGAAAAGGAGA 59.506 50.000 0.00 0.00 0.00 3.71
3764 4999 3.428862 GCGAGAGGAGAAGAAAAGGAGAG 60.429 52.174 0.00 0.00 0.00 3.20
3765 5000 4.013728 CGAGAGGAGAAGAAAAGGAGAGA 58.986 47.826 0.00 0.00 0.00 3.10
3766 5001 4.096382 CGAGAGGAGAAGAAAAGGAGAGAG 59.904 50.000 0.00 0.00 0.00 3.20
3767 5002 5.010708 AGAGGAGAAGAAAAGGAGAGAGT 57.989 43.478 0.00 0.00 0.00 3.24
3768 5003 5.016831 AGAGGAGAAGAAAAGGAGAGAGTC 58.983 45.833 0.00 0.00 0.00 3.36
3769 5004 3.761752 AGGAGAAGAAAAGGAGAGAGTCG 59.238 47.826 0.00 0.00 0.00 4.18
3770 5005 3.507786 GAGAAGAAAAGGAGAGAGTCGC 58.492 50.000 0.00 0.00 0.00 5.19
3771 5006 2.232696 AGAAGAAAAGGAGAGAGTCGCC 59.767 50.000 0.00 0.00 36.52 5.54
3772 5007 0.899019 AGAAAAGGAGAGAGTCGCCC 59.101 55.000 0.00 0.00 37.00 6.13
3773 5008 0.899019 GAAAAGGAGAGAGTCGCCCT 59.101 55.000 0.00 0.00 37.00 5.19
3774 5009 0.610687 AAAAGGAGAGAGTCGCCCTG 59.389 55.000 5.01 0.00 37.00 4.45
3775 5010 1.893919 AAAGGAGAGAGTCGCCCTGC 61.894 60.000 5.01 0.43 37.00 4.85
3776 5011 3.071206 GGAGAGAGTCGCCCTGCA 61.071 66.667 0.00 0.00 29.37 4.41
3777 5012 2.493973 GAGAGAGTCGCCCTGCAG 59.506 66.667 6.78 6.78 0.00 4.41
3778 5013 3.073735 AGAGAGTCGCCCTGCAGG 61.074 66.667 26.87 26.87 39.47 4.85
3789 5024 1.959042 CCCTGCAGGCACTATTACAG 58.041 55.000 28.39 5.53 36.02 2.74
3790 5025 1.210478 CCCTGCAGGCACTATTACAGT 59.790 52.381 28.39 0.00 36.02 3.55
4409 5817 0.748005 ATGTGGCCTTCGGGAAATCG 60.748 55.000 3.32 0.00 37.25 3.34
4597 6005 4.094590 CAGATTCAATGAGACTCCTGCAAC 59.905 45.833 0.00 0.00 0.00 4.17
4787 6203 2.872038 GCTGAATGACGGAAACTGGAGT 60.872 50.000 0.00 0.00 0.00 3.85
4846 6262 6.630444 ATGATTCATTCATCTGTAACAGGC 57.370 37.500 0.00 0.00 41.36 4.85
5051 6467 7.103641 TCTGCCTATTTGAAGTATCGAAAAGT 58.896 34.615 0.00 0.00 32.69 2.66
5155 6573 7.063308 CCTGCACACATGACATTAAAAATAACC 59.937 37.037 0.00 0.00 0.00 2.85
5341 6781 3.300009 CCGAATCTCAAAACAAGTGCAC 58.700 45.455 9.40 9.40 0.00 4.57
5378 6818 0.612453 AGGTGACCGAGGAAGAGGAC 60.612 60.000 0.00 0.00 0.00 3.85
5573 7019 5.119279 CAGTTCAGTTGTTCCTCTAATCACG 59.881 44.000 0.00 0.00 0.00 4.35
5637 7083 0.179032 TTGTGAACCGTCTGTGCCAT 60.179 50.000 0.00 0.00 0.00 4.40
5645 7091 1.009829 CGTCTGTGCCATAGCTTTCC 58.990 55.000 0.00 0.00 40.80 3.13
5674 7120 6.974932 AATGACTAATGTTCTGCTGTACTG 57.025 37.500 0.00 0.00 0.00 2.74
5689 7135 5.104941 TGCTGTACTGTATATGCAGACCTTT 60.105 40.000 25.33 6.92 39.62 3.11
5698 7144 0.687354 TGCAGACCTTTCCCAGAGAC 59.313 55.000 0.00 0.00 0.00 3.36
5970 7416 5.705905 GGTTTGTTCTGCTGGATTAACTAGT 59.294 40.000 0.00 0.00 0.00 2.57
6076 7535 6.041751 AGCTTGTGTACCAGTAGAAGTAGTTT 59.958 38.462 0.00 0.00 0.00 2.66
6078 7537 7.226128 GCTTGTGTACCAGTAGAAGTAGTTTTT 59.774 37.037 0.00 0.00 0.00 1.94
6089 7583 7.981225 AGTAGAAGTAGTTTTTGAAACGTACCA 59.019 33.333 0.00 0.00 0.00 3.25
6102 7596 5.471797 TGAAACGTACCATGTGAATGTTCAT 59.528 36.000 0.00 0.00 39.73 2.57
6217 7738 3.831911 TGGCTTACTCCCCTGAAATTTTG 59.168 43.478 0.00 0.00 0.00 2.44
6300 7828 1.875514 AGCTGTGTGCACATGTTACTG 59.124 47.619 24.69 14.11 45.94 2.74
6369 7897 1.091537 CGTGTGTTCTTGTGTGGGTT 58.908 50.000 0.00 0.00 0.00 4.11
6370 7898 2.093606 TCGTGTGTTCTTGTGTGGGTTA 60.094 45.455 0.00 0.00 0.00 2.85
6483 8013 9.513906 TTTTGTTAGACCTGTGATGATATGAAA 57.486 29.630 0.00 0.00 0.00 2.69
6532 8192 5.163364 TGGCTCTTTATCTGGTTTTGCAAAA 60.163 36.000 20.46 20.46 0.00 2.44
6591 8251 4.291540 TCACAACATCAACAGCAAGAAC 57.708 40.909 0.00 0.00 0.00 3.01
6595 8255 3.715628 ACATCAACAGCAAGAACCAAC 57.284 42.857 0.00 0.00 0.00 3.77
6683 8343 8.922676 GTTAGACGAGAACTTACAAATTGATGA 58.077 33.333 0.00 0.00 0.00 2.92
6688 8348 7.604164 ACGAGAACTTACAAATTGATGAGATGT 59.396 33.333 0.00 0.00 0.00 3.06
6743 8403 4.943093 TGTGTCCATGATGACGATGAAAAT 59.057 37.500 0.00 0.00 38.11 1.82
7077 8827 4.548669 GAACCCTCTCATCCCTAAGTAGT 58.451 47.826 0.00 0.00 0.00 2.73
7083 8833 4.093743 TCTCATCCCTAAGTAGTTGTGCA 58.906 43.478 0.00 0.00 0.00 4.57
7092 8842 4.732285 AAGTAGTTGTGCATTCGACAAG 57.268 40.909 0.00 0.00 34.02 3.16
7161 8933 5.888982 TGAGAAGGTGGTAAAGAAAGAGT 57.111 39.130 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.264005 TTTTCTCAACCTAGCGCCAA 57.736 45.000 2.29 0.00 0.00 4.52
2 3 2.152016 ACTTTTTCTCAACCTAGCGCC 58.848 47.619 2.29 0.00 0.00 6.53
3 4 2.159824 GGACTTTTTCTCAACCTAGCGC 59.840 50.000 0.00 0.00 0.00 5.92
4 5 2.742589 GGGACTTTTTCTCAACCTAGCG 59.257 50.000 0.00 0.00 0.00 4.26
5 6 3.082548 GGGGACTTTTTCTCAACCTAGC 58.917 50.000 0.00 0.00 0.00 3.42
6 7 3.073946 TGGGGGACTTTTTCTCAACCTAG 59.926 47.826 0.00 0.00 0.00 3.02
7 8 3.057586 TGGGGGACTTTTTCTCAACCTA 58.942 45.455 0.00 0.00 0.00 3.08
8 9 1.856920 TGGGGGACTTTTTCTCAACCT 59.143 47.619 0.00 0.00 0.00 3.50
9 10 2.375014 TGGGGGACTTTTTCTCAACC 57.625 50.000 0.00 0.00 0.00 3.77
10 11 2.035961 GCTTGGGGGACTTTTTCTCAAC 59.964 50.000 0.00 0.00 0.00 3.18
11 12 2.091333 AGCTTGGGGGACTTTTTCTCAA 60.091 45.455 0.00 0.00 0.00 3.02
12 13 1.499007 AGCTTGGGGGACTTTTTCTCA 59.501 47.619 0.00 0.00 0.00 3.27
13 14 2.294449 AGCTTGGGGGACTTTTTCTC 57.706 50.000 0.00 0.00 0.00 2.87
14 15 2.319844 CAAGCTTGGGGGACTTTTTCT 58.680 47.619 19.14 0.00 0.00 2.52
15 16 1.270305 GCAAGCTTGGGGGACTTTTTC 60.270 52.381 27.10 2.68 0.00 2.29
16 17 0.758734 GCAAGCTTGGGGGACTTTTT 59.241 50.000 27.10 0.00 0.00 1.94
17 18 0.105504 AGCAAGCTTGGGGGACTTTT 60.106 50.000 27.10 0.00 0.00 2.27
18 19 0.829182 CAGCAAGCTTGGGGGACTTT 60.829 55.000 27.10 0.00 0.00 2.66
19 20 1.228675 CAGCAAGCTTGGGGGACTT 60.229 57.895 27.10 0.00 0.00 3.01
20 21 1.504275 ATCAGCAAGCTTGGGGGACT 61.504 55.000 27.10 12.68 0.00 3.85
21 22 1.000396 ATCAGCAAGCTTGGGGGAC 60.000 57.895 27.10 10.53 0.00 4.46
22 23 1.000521 CATCAGCAAGCTTGGGGGA 60.001 57.895 27.10 0.00 0.00 4.81
23 24 2.056223 CCATCAGCAAGCTTGGGGG 61.056 63.158 27.10 12.71 0.00 5.40
24 25 2.718073 GCCATCAGCAAGCTTGGGG 61.718 63.158 27.10 10.37 42.97 4.96
25 26 2.718073 GGCCATCAGCAAGCTTGGG 61.718 63.158 27.10 19.41 46.50 4.12
26 27 1.327690 ATGGCCATCAGCAAGCTTGG 61.328 55.000 27.10 12.00 46.50 3.61
27 28 0.102481 GATGGCCATCAGCAAGCTTG 59.898 55.000 35.93 22.44 46.50 4.01
28 29 0.323999 TGATGGCCATCAGCAAGCTT 60.324 50.000 38.91 6.03 46.50 3.74
29 30 1.305287 TGATGGCCATCAGCAAGCT 59.695 52.632 38.91 6.90 46.50 3.74
30 31 3.929002 TGATGGCCATCAGCAAGC 58.071 55.556 38.91 16.99 46.50 4.01
38 39 0.110678 CAGCTCTGGATGATGGCCAT 59.889 55.000 20.96 20.96 38.43 4.40
39 40 1.530283 CAGCTCTGGATGATGGCCA 59.470 57.895 8.56 8.56 0.00 5.36
40 41 1.897615 GCAGCTCTGGATGATGGCC 60.898 63.158 0.00 0.00 0.00 5.36
41 42 0.465824 AAGCAGCTCTGGATGATGGC 60.466 55.000 0.00 0.00 0.00 4.40
42 43 1.676529 CAAAGCAGCTCTGGATGATGG 59.323 52.381 0.00 0.00 0.00 3.51
43 44 1.676529 CCAAAGCAGCTCTGGATGATG 59.323 52.381 9.46 0.00 31.38 3.07
44 45 1.562942 TCCAAAGCAGCTCTGGATGAT 59.437 47.619 14.00 0.00 34.26 2.45
45 46 0.986527 TCCAAAGCAGCTCTGGATGA 59.013 50.000 14.00 0.00 34.26 2.92
46 47 2.054232 ATCCAAAGCAGCTCTGGATG 57.946 50.000 26.95 7.20 46.07 3.51
48 49 2.191400 AGTATCCAAAGCAGCTCTGGA 58.809 47.619 20.21 20.21 43.26 3.86
49 50 2.706339 AGTATCCAAAGCAGCTCTGG 57.294 50.000 8.70 8.70 0.00 3.86
50 51 5.446473 CGTTTAAGTATCCAAAGCAGCTCTG 60.446 44.000 0.00 0.00 0.00 3.35
51 52 4.631813 CGTTTAAGTATCCAAAGCAGCTCT 59.368 41.667 0.00 0.00 0.00 4.09
52 53 4.630069 TCGTTTAAGTATCCAAAGCAGCTC 59.370 41.667 0.00 0.00 0.00 4.09
53 54 4.575885 TCGTTTAAGTATCCAAAGCAGCT 58.424 39.130 0.00 0.00 0.00 4.24
54 55 4.939509 TCGTTTAAGTATCCAAAGCAGC 57.060 40.909 0.00 0.00 0.00 5.25
55 56 6.422776 ACATCGTTTAAGTATCCAAAGCAG 57.577 37.500 0.00 0.00 0.00 4.24
56 57 6.811253 AACATCGTTTAAGTATCCAAAGCA 57.189 33.333 0.00 0.00 0.00 3.91
57 58 9.783256 AAATAACATCGTTTAAGTATCCAAAGC 57.217 29.630 0.00 0.00 0.00 3.51
60 61 8.679100 CCCAAATAACATCGTTTAAGTATCCAA 58.321 33.333 0.00 0.00 0.00 3.53
61 62 7.201750 GCCCAAATAACATCGTTTAAGTATCCA 60.202 37.037 0.00 0.00 0.00 3.41
62 63 7.012989 AGCCCAAATAACATCGTTTAAGTATCC 59.987 37.037 0.00 0.00 0.00 2.59
63 64 7.855904 CAGCCCAAATAACATCGTTTAAGTATC 59.144 37.037 0.00 0.00 0.00 2.24
64 65 7.681065 GCAGCCCAAATAACATCGTTTAAGTAT 60.681 37.037 0.00 0.00 0.00 2.12
65 66 6.403855 GCAGCCCAAATAACATCGTTTAAGTA 60.404 38.462 0.00 0.00 0.00 2.24
66 67 5.621329 GCAGCCCAAATAACATCGTTTAAGT 60.621 40.000 0.00 0.00 0.00 2.24
67 68 4.798387 GCAGCCCAAATAACATCGTTTAAG 59.202 41.667 0.00 0.00 0.00 1.85
68 69 4.461081 AGCAGCCCAAATAACATCGTTTAA 59.539 37.500 0.00 0.00 0.00 1.52
69 70 4.013728 AGCAGCCCAAATAACATCGTTTA 58.986 39.130 0.00 0.00 0.00 2.01
70 71 2.825532 AGCAGCCCAAATAACATCGTTT 59.174 40.909 0.00 0.00 0.00 3.60
71 72 2.164219 CAGCAGCCCAAATAACATCGTT 59.836 45.455 0.00 0.00 0.00 3.85
72 73 1.745087 CAGCAGCCCAAATAACATCGT 59.255 47.619 0.00 0.00 0.00 3.73
73 74 2.016318 TCAGCAGCCCAAATAACATCG 58.984 47.619 0.00 0.00 0.00 3.84
74 75 3.019564 AGTCAGCAGCCCAAATAACATC 58.980 45.455 0.00 0.00 0.00 3.06
75 76 3.019564 GAGTCAGCAGCCCAAATAACAT 58.980 45.455 0.00 0.00 0.00 2.71
76 77 2.436417 GAGTCAGCAGCCCAAATAACA 58.564 47.619 0.00 0.00 0.00 2.41
77 78 1.745653 GGAGTCAGCAGCCCAAATAAC 59.254 52.381 0.00 0.00 0.00 1.89
78 79 1.635487 AGGAGTCAGCAGCCCAAATAA 59.365 47.619 0.00 0.00 0.00 1.40
79 80 1.289160 AGGAGTCAGCAGCCCAAATA 58.711 50.000 0.00 0.00 0.00 1.40
80 81 1.065126 GTAGGAGTCAGCAGCCCAAAT 60.065 52.381 0.00 0.00 0.00 2.32
81 82 0.324943 GTAGGAGTCAGCAGCCCAAA 59.675 55.000 0.00 0.00 0.00 3.28
82 83 1.888436 CGTAGGAGTCAGCAGCCCAA 61.888 60.000 0.00 0.00 0.00 4.12
83 84 2.351244 CGTAGGAGTCAGCAGCCCA 61.351 63.158 0.00 0.00 0.00 5.36
84 85 1.889530 AACGTAGGAGTCAGCAGCCC 61.890 60.000 0.00 0.00 0.00 5.19
85 86 0.737715 CAACGTAGGAGTCAGCAGCC 60.738 60.000 0.00 0.00 0.00 4.85
86 87 1.355066 GCAACGTAGGAGTCAGCAGC 61.355 60.000 0.00 0.00 0.00 5.25
87 88 0.038251 TGCAACGTAGGAGTCAGCAG 60.038 55.000 0.00 0.00 33.34 4.24
88 89 0.608130 ATGCAACGTAGGAGTCAGCA 59.392 50.000 0.00 0.00 38.66 4.41
89 90 1.002366 CATGCAACGTAGGAGTCAGC 58.998 55.000 0.00 0.00 0.00 4.26
90 91 1.204704 TCCATGCAACGTAGGAGTCAG 59.795 52.381 0.00 0.00 0.00 3.51
91 92 1.262417 TCCATGCAACGTAGGAGTCA 58.738 50.000 0.00 0.00 0.00 3.41
92 93 2.604046 ATCCATGCAACGTAGGAGTC 57.396 50.000 0.00 0.00 32.91 3.36
93 94 3.031736 AGTATCCATGCAACGTAGGAGT 58.968 45.455 0.00 0.00 32.91 3.85
94 95 3.735237 AGTATCCATGCAACGTAGGAG 57.265 47.619 0.00 0.00 32.91 3.69
95 96 3.431626 CCAAGTATCCATGCAACGTAGGA 60.432 47.826 0.00 0.00 34.12 2.94
133 134 3.359002 GGCGTATCCCCGTATCGT 58.641 61.111 0.00 0.00 0.00 3.73
257 264 3.544684 TCGTATTGAGGCATGCTTTGAT 58.455 40.909 18.92 10.49 0.00 2.57
490 498 4.610333 GATTTGGATACCTGAAACCCCTT 58.390 43.478 0.00 0.00 0.00 3.95
570 580 2.734755 TCCCGTAAGTATCCCTCGAA 57.265 50.000 0.00 0.00 0.00 3.71
598 608 2.249139 GATACTGCCCCGATACTTCCT 58.751 52.381 0.00 0.00 0.00 3.36
654 664 2.309528 TGCGCGGATACTTCAGAAAT 57.690 45.000 8.83 0.00 0.00 2.17
791 803 0.892755 TCAGTACCTTGGTACGCAGG 59.107 55.000 20.26 13.15 37.42 4.85
796 808 4.868314 AACTCTGTCAGTACCTTGGTAC 57.132 45.455 19.22 19.22 32.30 3.34
798 810 6.495872 TGTAATAACTCTGTCAGTACCTTGGT 59.504 38.462 0.00 0.00 32.30 3.67
799 811 6.931838 TGTAATAACTCTGTCAGTACCTTGG 58.068 40.000 0.00 0.00 32.30 3.61
865 888 2.642139 TCGTACCCTACTTTTCGCAG 57.358 50.000 0.00 0.00 0.00 5.18
961 1013 7.739295 TCAATTAAAATAAGAGTCTCACGTGC 58.261 34.615 11.67 0.00 0.00 5.34
976 1028 6.014327 ACTGCCATCACACCTTCAATTAAAAT 60.014 34.615 0.00 0.00 0.00 1.82
1098 1176 3.517100 AGAGCCAATACTTCTGCAGAGAA 59.483 43.478 17.43 6.85 36.72 2.87
1100 1178 3.456280 GAGAGCCAATACTTCTGCAGAG 58.544 50.000 17.43 13.36 0.00 3.35
1101 1179 2.159184 CGAGAGCCAATACTTCTGCAGA 60.159 50.000 13.74 13.74 0.00 4.26
1102 1180 2.200067 CGAGAGCCAATACTTCTGCAG 58.800 52.381 7.63 7.63 0.00 4.41
1103 1181 1.134699 CCGAGAGCCAATACTTCTGCA 60.135 52.381 0.00 0.00 0.00 4.41
1104 1182 1.576356 CCGAGAGCCAATACTTCTGC 58.424 55.000 0.00 0.00 0.00 4.26
1105 1183 1.134699 TGCCGAGAGCCAATACTTCTG 60.135 52.381 0.00 0.00 42.71 3.02
1106 1184 1.195115 TGCCGAGAGCCAATACTTCT 58.805 50.000 0.00 0.00 42.71 2.85
1107 1185 2.024176 TTGCCGAGAGCCAATACTTC 57.976 50.000 0.00 0.00 42.71 3.01
1108 1186 2.359900 CTTTGCCGAGAGCCAATACTT 58.640 47.619 0.00 0.00 42.71 2.24
1109 1187 1.407437 CCTTTGCCGAGAGCCAATACT 60.407 52.381 0.00 0.00 42.71 2.12
1110 1188 1.017387 CCTTTGCCGAGAGCCAATAC 58.983 55.000 0.00 0.00 42.71 1.89
1111 1189 0.618458 ACCTTTGCCGAGAGCCAATA 59.382 50.000 0.00 0.00 42.71 1.90
1112 1190 0.618458 TACCTTTGCCGAGAGCCAAT 59.382 50.000 0.00 0.00 42.71 3.16
1113 1191 0.398696 TTACCTTTGCCGAGAGCCAA 59.601 50.000 0.00 0.00 42.71 4.52
1114 1192 0.036388 CTTACCTTTGCCGAGAGCCA 60.036 55.000 0.00 0.00 42.71 4.75
1115 1193 0.249398 TCTTACCTTTGCCGAGAGCC 59.751 55.000 0.00 0.00 42.71 4.70
1116 1194 1.646189 CTCTTACCTTTGCCGAGAGC 58.354 55.000 0.00 0.00 44.14 4.09
1117 1195 1.740718 GCCTCTTACCTTTGCCGAGAG 60.741 57.143 0.00 0.00 34.93 3.20
1118 1196 0.249398 GCCTCTTACCTTTGCCGAGA 59.751 55.000 0.00 0.00 0.00 4.04
1119 1197 0.250513 AGCCTCTTACCTTTGCCGAG 59.749 55.000 0.00 0.00 0.00 4.63
1120 1198 0.690762 AAGCCTCTTACCTTTGCCGA 59.309 50.000 0.00 0.00 0.00 5.54
1121 1199 1.087501 GAAGCCTCTTACCTTTGCCG 58.912 55.000 0.00 0.00 0.00 5.69
1122 1200 2.087646 CAGAAGCCTCTTACCTTTGCC 58.912 52.381 0.00 0.00 0.00 4.52
1123 1201 2.087646 CCAGAAGCCTCTTACCTTTGC 58.912 52.381 0.00 0.00 0.00 3.68
1124 1202 3.425162 ACCAGAAGCCTCTTACCTTTG 57.575 47.619 0.00 0.00 0.00 2.77
1125 1203 4.455070 AAACCAGAAGCCTCTTACCTTT 57.545 40.909 0.00 0.00 0.00 3.11
1126 1204 4.455070 AAAACCAGAAGCCTCTTACCTT 57.545 40.909 0.00 0.00 0.00 3.50
1127 1205 4.104897 AGAAAAACCAGAAGCCTCTTACCT 59.895 41.667 0.00 0.00 0.00 3.08
1128 1206 4.399219 AGAAAAACCAGAAGCCTCTTACC 58.601 43.478 0.00 0.00 0.00 2.85
1129 1207 6.231951 AGTAGAAAAACCAGAAGCCTCTTAC 58.768 40.000 0.00 0.00 0.00 2.34
1130 1208 6.435292 AGTAGAAAAACCAGAAGCCTCTTA 57.565 37.500 0.00 0.00 0.00 2.10
1131 1209 5.311844 AGTAGAAAAACCAGAAGCCTCTT 57.688 39.130 0.00 0.00 0.00 2.85
1132 1210 4.984146 AGTAGAAAAACCAGAAGCCTCT 57.016 40.909 0.00 0.00 0.00 3.69
1133 1211 5.765677 AGAAAGTAGAAAAACCAGAAGCCTC 59.234 40.000 0.00 0.00 0.00 4.70
1134 1212 5.696030 AGAAAGTAGAAAAACCAGAAGCCT 58.304 37.500 0.00 0.00 0.00 4.58
1135 1213 6.711194 AGTAGAAAGTAGAAAAACCAGAAGCC 59.289 38.462 0.00 0.00 0.00 4.35
1136 1214 7.731882 AGTAGAAAGTAGAAAAACCAGAAGC 57.268 36.000 0.00 0.00 0.00 3.86
1137 1215 9.760077 TGTAGTAGAAAGTAGAAAAACCAGAAG 57.240 33.333 0.00 0.00 0.00 2.85
1139 1217 9.924650 GATGTAGTAGAAAGTAGAAAAACCAGA 57.075 33.333 0.00 0.00 0.00 3.86
1140 1218 9.152595 GGATGTAGTAGAAAGTAGAAAAACCAG 57.847 37.037 0.00 0.00 0.00 4.00
1141 1219 8.877195 AGGATGTAGTAGAAAGTAGAAAAACCA 58.123 33.333 0.00 0.00 0.00 3.67
1142 1220 9.722184 AAGGATGTAGTAGAAAGTAGAAAAACC 57.278 33.333 0.00 0.00 0.00 3.27
1147 1225 8.684520 GCACTAAGGATGTAGTAGAAAGTAGAA 58.315 37.037 0.00 0.00 32.92 2.10
1148 1226 7.832685 TGCACTAAGGATGTAGTAGAAAGTAGA 59.167 37.037 0.00 0.00 32.92 2.59
1149 1227 7.997482 TGCACTAAGGATGTAGTAGAAAGTAG 58.003 38.462 0.00 0.00 32.92 2.57
1150 1228 7.949690 TGCACTAAGGATGTAGTAGAAAGTA 57.050 36.000 0.00 0.00 32.92 2.24
1151 1229 6.852420 TGCACTAAGGATGTAGTAGAAAGT 57.148 37.500 0.00 0.00 32.92 2.66
1152 1230 9.817809 TTTATGCACTAAGGATGTAGTAGAAAG 57.182 33.333 0.00 0.00 32.92 2.62
1153 1231 9.595823 GTTTATGCACTAAGGATGTAGTAGAAA 57.404 33.333 0.00 0.00 32.92 2.52
1154 1232 8.978472 AGTTTATGCACTAAGGATGTAGTAGAA 58.022 33.333 0.00 0.00 32.92 2.10
1155 1233 8.534954 AGTTTATGCACTAAGGATGTAGTAGA 57.465 34.615 0.00 0.00 32.92 2.59
1156 1234 9.035607 CAAGTTTATGCACTAAGGATGTAGTAG 57.964 37.037 0.00 0.00 32.92 2.57
1157 1235 8.755028 TCAAGTTTATGCACTAAGGATGTAGTA 58.245 33.333 0.00 0.00 32.92 1.82
1158 1236 7.620880 TCAAGTTTATGCACTAAGGATGTAGT 58.379 34.615 0.00 0.00 34.56 2.73
1159 1237 8.668510 ATCAAGTTTATGCACTAAGGATGTAG 57.331 34.615 0.00 0.00 0.00 2.74
1160 1238 9.542462 GTATCAAGTTTATGCACTAAGGATGTA 57.458 33.333 0.00 0.00 0.00 2.29
1161 1239 8.267894 AGTATCAAGTTTATGCACTAAGGATGT 58.732 33.333 0.00 0.00 0.00 3.06
1162 1240 8.668510 AGTATCAAGTTTATGCACTAAGGATG 57.331 34.615 0.00 0.00 0.00 3.51
1163 1241 9.331282 GAAGTATCAAGTTTATGCACTAAGGAT 57.669 33.333 0.00 0.00 0.00 3.24
1164 1242 8.540388 AGAAGTATCAAGTTTATGCACTAAGGA 58.460 33.333 0.00 0.00 0.00 3.36
1165 1243 8.723942 AGAAGTATCAAGTTTATGCACTAAGG 57.276 34.615 0.00 0.00 0.00 2.69
1168 1246 8.946085 CCAAAGAAGTATCAAGTTTATGCACTA 58.054 33.333 0.00 0.00 0.00 2.74
1169 1247 7.665559 TCCAAAGAAGTATCAAGTTTATGCACT 59.334 33.333 0.00 0.00 0.00 4.40
1170 1248 7.816640 TCCAAAGAAGTATCAAGTTTATGCAC 58.183 34.615 0.00 0.00 0.00 4.57
1171 1249 7.994425 TCCAAAGAAGTATCAAGTTTATGCA 57.006 32.000 0.00 0.00 0.00 3.96
1172 1250 8.897752 AGATCCAAAGAAGTATCAAGTTTATGC 58.102 33.333 0.00 0.00 0.00 3.14
1175 1253 9.793259 ACAAGATCCAAAGAAGTATCAAGTTTA 57.207 29.630 0.00 0.00 0.00 2.01
1176 1254 8.697507 ACAAGATCCAAAGAAGTATCAAGTTT 57.302 30.769 0.00 0.00 0.00 2.66
1177 1255 8.697507 AACAAGATCCAAAGAAGTATCAAGTT 57.302 30.769 0.00 0.00 0.00 2.66
1178 1256 8.697507 AAACAAGATCCAAAGAAGTATCAAGT 57.302 30.769 0.00 0.00 0.00 3.16
1181 1259 9.177608 CCATAAACAAGATCCAAAGAAGTATCA 57.822 33.333 0.00 0.00 0.00 2.15
1182 1260 9.178758 ACCATAAACAAGATCCAAAGAAGTATC 57.821 33.333 0.00 0.00 0.00 2.24
1183 1261 8.960591 CACCATAAACAAGATCCAAAGAAGTAT 58.039 33.333 0.00 0.00 0.00 2.12
1184 1262 7.393234 CCACCATAAACAAGATCCAAAGAAGTA 59.607 37.037 0.00 0.00 0.00 2.24
1185 1263 6.209391 CCACCATAAACAAGATCCAAAGAAGT 59.791 38.462 0.00 0.00 0.00 3.01
1186 1264 6.624423 CCACCATAAACAAGATCCAAAGAAG 58.376 40.000 0.00 0.00 0.00 2.85
1187 1265 5.047377 GCCACCATAAACAAGATCCAAAGAA 60.047 40.000 0.00 0.00 0.00 2.52
1188 1266 4.462483 GCCACCATAAACAAGATCCAAAGA 59.538 41.667 0.00 0.00 0.00 2.52
1189 1267 4.463891 AGCCACCATAAACAAGATCCAAAG 59.536 41.667 0.00 0.00 0.00 2.77
1190 1268 4.415596 AGCCACCATAAACAAGATCCAAA 58.584 39.130 0.00 0.00 0.00 3.28
1191 1269 4.016444 GAGCCACCATAAACAAGATCCAA 58.984 43.478 0.00 0.00 0.00 3.53
1192 1270 3.620488 GAGCCACCATAAACAAGATCCA 58.380 45.455 0.00 0.00 0.00 3.41
1193 1271 2.952310 GGAGCCACCATAAACAAGATCC 59.048 50.000 0.00 0.00 38.79 3.36
1194 1272 3.891049 AGGAGCCACCATAAACAAGATC 58.109 45.455 0.47 0.00 42.04 2.75
1195 1273 4.322057 AAGGAGCCACCATAAACAAGAT 57.678 40.909 0.47 0.00 42.04 2.40
1196 1274 3.806949 AAGGAGCCACCATAAACAAGA 57.193 42.857 0.47 0.00 42.04 3.02
1197 1275 5.010282 ACTAAAGGAGCCACCATAAACAAG 58.990 41.667 0.47 0.00 42.04 3.16
1198 1276 4.764823 CACTAAAGGAGCCACCATAAACAA 59.235 41.667 0.47 0.00 42.04 2.83
1199 1277 4.331968 CACTAAAGGAGCCACCATAAACA 58.668 43.478 0.47 0.00 42.04 2.83
1200 1278 3.128764 GCACTAAAGGAGCCACCATAAAC 59.871 47.826 0.47 0.00 42.04 2.01
1201 1279 3.010138 AGCACTAAAGGAGCCACCATAAA 59.990 43.478 0.47 0.00 42.04 1.40
1202 1280 2.576191 AGCACTAAAGGAGCCACCATAA 59.424 45.455 0.47 0.00 42.04 1.90
1203 1281 2.196595 AGCACTAAAGGAGCCACCATA 58.803 47.619 0.47 0.00 42.04 2.74
1204 1282 0.995024 AGCACTAAAGGAGCCACCAT 59.005 50.000 0.47 0.00 42.04 3.55
1205 1283 0.771127 AAGCACTAAAGGAGCCACCA 59.229 50.000 0.47 0.00 42.04 4.17
1206 1284 1.168714 CAAGCACTAAAGGAGCCACC 58.831 55.000 0.00 0.00 39.35 4.61
1207 1285 0.523519 GCAAGCACTAAAGGAGCCAC 59.476 55.000 0.00 0.00 0.00 5.01
1208 1286 0.401738 AGCAAGCACTAAAGGAGCCA 59.598 50.000 0.00 0.00 0.00 4.75
1209 1287 1.200948 CAAGCAAGCACTAAAGGAGCC 59.799 52.381 0.00 0.00 0.00 4.70
1210 1288 1.402062 GCAAGCAAGCACTAAAGGAGC 60.402 52.381 0.00 0.00 0.00 4.70
1211 1289 1.881973 TGCAAGCAAGCACTAAAGGAG 59.118 47.619 0.00 0.00 40.11 3.69
1212 1290 1.979855 TGCAAGCAAGCACTAAAGGA 58.020 45.000 0.00 0.00 40.11 3.36
1226 1304 6.500684 TCAAAGGAAAGTAAGCTATGCAAG 57.499 37.500 0.00 0.00 0.00 4.01
1227 1305 7.466746 AATCAAAGGAAAGTAAGCTATGCAA 57.533 32.000 0.00 0.00 0.00 4.08
1228 1306 7.466746 AAATCAAAGGAAAGTAAGCTATGCA 57.533 32.000 0.00 0.00 0.00 3.96
1229 1307 8.763049 AAAAATCAAAGGAAAGTAAGCTATGC 57.237 30.769 0.00 0.00 0.00 3.14
1232 1310 9.349713 TCAGAAAAATCAAAGGAAAGTAAGCTA 57.650 29.630 0.00 0.00 0.00 3.32
1233 1311 8.138074 GTCAGAAAAATCAAAGGAAAGTAAGCT 58.862 33.333 0.00 0.00 0.00 3.74
1234 1312 7.920682 TGTCAGAAAAATCAAAGGAAAGTAAGC 59.079 33.333 0.00 0.00 0.00 3.09
1235 1313 9.971922 ATGTCAGAAAAATCAAAGGAAAGTAAG 57.028 29.630 0.00 0.00 0.00 2.34
1236 1314 9.965824 GATGTCAGAAAAATCAAAGGAAAGTAA 57.034 29.630 0.00 0.00 0.00 2.24
1237 1315 9.130661 TGATGTCAGAAAAATCAAAGGAAAGTA 57.869 29.630 0.00 0.00 0.00 2.24
1238 1316 8.010733 TGATGTCAGAAAAATCAAAGGAAAGT 57.989 30.769 0.00 0.00 0.00 2.66
1239 1317 8.876275 TTGATGTCAGAAAAATCAAAGGAAAG 57.124 30.769 0.00 0.00 37.37 2.62
1250 1328 9.970395 GGATGCATATATTTGATGTCAGAAAAA 57.030 29.630 0.00 0.00 0.00 1.94
1251 1329 9.134055 TGGATGCATATATTTGATGTCAGAAAA 57.866 29.630 0.00 0.00 0.00 2.29
1252 1330 8.694581 TGGATGCATATATTTGATGTCAGAAA 57.305 30.769 0.00 0.00 0.00 2.52
1253 1331 8.736244 CATGGATGCATATATTTGATGTCAGAA 58.264 33.333 0.00 0.00 0.00 3.02
1254 1332 7.886446 ACATGGATGCATATATTTGATGTCAGA 59.114 33.333 0.00 0.00 0.00 3.27
1255 1333 7.968405 CACATGGATGCATATATTTGATGTCAG 59.032 37.037 0.00 0.00 0.00 3.51
1256 1334 7.666388 TCACATGGATGCATATATTTGATGTCA 59.334 33.333 0.00 0.00 0.00 3.58
1257 1335 8.047413 TCACATGGATGCATATATTTGATGTC 57.953 34.615 0.00 0.00 0.00 3.06
1258 1336 8.411991 TTCACATGGATGCATATATTTGATGT 57.588 30.769 0.00 0.00 0.00 3.06
1259 1337 9.869757 AATTCACATGGATGCATATATTTGATG 57.130 29.630 0.00 0.00 0.00 3.07
1261 1339 9.699703 CAAATTCACATGGATGCATATATTTGA 57.300 29.630 19.29 3.36 33.41 2.69
1262 1340 8.931775 CCAAATTCACATGGATGCATATATTTG 58.068 33.333 18.19 18.19 39.12 2.32
1263 1341 8.872134 TCCAAATTCACATGGATGCATATATTT 58.128 29.630 0.00 1.48 40.74 1.40
1264 1342 8.425237 TCCAAATTCACATGGATGCATATATT 57.575 30.769 0.00 0.00 40.74 1.28
1265 1343 8.308931 GTTCCAAATTCACATGGATGCATATAT 58.691 33.333 0.00 0.00 44.83 0.86
1266 1344 7.287235 TGTTCCAAATTCACATGGATGCATATA 59.713 33.333 0.00 0.00 44.83 0.86
1267 1345 6.098552 TGTTCCAAATTCACATGGATGCATAT 59.901 34.615 0.00 0.00 44.83 1.78
1268 1346 5.421374 TGTTCCAAATTCACATGGATGCATA 59.579 36.000 0.00 0.00 44.83 3.14
1269 1347 4.223255 TGTTCCAAATTCACATGGATGCAT 59.777 37.500 0.00 0.00 44.83 3.96
1270 1348 3.577415 TGTTCCAAATTCACATGGATGCA 59.423 39.130 0.00 0.00 44.83 3.96
1271 1349 4.082081 TCTGTTCCAAATTCACATGGATGC 60.082 41.667 0.00 0.00 44.83 3.91
1272 1350 5.184479 AGTCTGTTCCAAATTCACATGGATG 59.816 40.000 0.00 0.00 44.83 3.51
1273 1351 5.184479 CAGTCTGTTCCAAATTCACATGGAT 59.816 40.000 0.00 0.00 44.83 3.41
1274 1352 4.520111 CAGTCTGTTCCAAATTCACATGGA 59.480 41.667 0.00 0.00 43.84 3.41
1275 1353 4.801891 CAGTCTGTTCCAAATTCACATGG 58.198 43.478 0.00 0.00 38.09 3.66
1276 1354 4.022589 AGCAGTCTGTTCCAAATTCACATG 60.023 41.667 0.93 0.00 0.00 3.21
1277 1355 4.022589 CAGCAGTCTGTTCCAAATTCACAT 60.023 41.667 0.93 0.00 35.61 3.21
1278 1356 3.316029 CAGCAGTCTGTTCCAAATTCACA 59.684 43.478 0.93 0.00 35.61 3.58
1279 1357 3.565482 TCAGCAGTCTGTTCCAAATTCAC 59.435 43.478 0.93 0.00 41.10 3.18
1280 1358 3.819368 TCAGCAGTCTGTTCCAAATTCA 58.181 40.909 0.93 0.00 41.10 2.57
1281 1359 6.072508 TGTTATCAGCAGTCTGTTCCAAATTC 60.073 38.462 0.93 0.00 41.10 2.17
1282 1360 5.769662 TGTTATCAGCAGTCTGTTCCAAATT 59.230 36.000 0.93 0.00 41.10 1.82
1283 1361 5.316167 TGTTATCAGCAGTCTGTTCCAAAT 58.684 37.500 0.93 0.00 41.10 2.32
1284 1362 4.713553 TGTTATCAGCAGTCTGTTCCAAA 58.286 39.130 0.93 0.00 41.10 3.28
1285 1363 4.350368 TGTTATCAGCAGTCTGTTCCAA 57.650 40.909 0.93 0.00 41.10 3.53
1286 1364 4.350368 TTGTTATCAGCAGTCTGTTCCA 57.650 40.909 0.93 0.00 41.10 3.53
1287 1365 5.886960 ATTTGTTATCAGCAGTCTGTTCC 57.113 39.130 0.93 0.00 41.10 3.62
1288 1366 7.459486 CAGTATTTGTTATCAGCAGTCTGTTC 58.541 38.462 0.93 0.00 41.10 3.18
1289 1367 6.128172 GCAGTATTTGTTATCAGCAGTCTGTT 60.128 38.462 0.93 0.00 41.10 3.16
1290 1368 5.352569 GCAGTATTTGTTATCAGCAGTCTGT 59.647 40.000 0.93 0.00 41.10 3.41
1291 1369 5.583854 AGCAGTATTTGTTATCAGCAGTCTG 59.416 40.000 0.00 0.00 41.67 3.51
1292 1370 5.738909 AGCAGTATTTGTTATCAGCAGTCT 58.261 37.500 0.00 0.00 0.00 3.24
1293 1371 6.758886 AGTAGCAGTATTTGTTATCAGCAGTC 59.241 38.462 0.00 0.00 0.00 3.51
1294 1372 6.644347 AGTAGCAGTATTTGTTATCAGCAGT 58.356 36.000 0.00 0.00 0.00 4.40
1295 1373 7.278646 TGAAGTAGCAGTATTTGTTATCAGCAG 59.721 37.037 0.00 0.00 0.00 4.24
1296 1374 7.102993 TGAAGTAGCAGTATTTGTTATCAGCA 58.897 34.615 0.00 0.00 0.00 4.41
1297 1375 7.539712 TGAAGTAGCAGTATTTGTTATCAGC 57.460 36.000 0.00 0.00 0.00 4.26
1298 1376 8.768955 GGATGAAGTAGCAGTATTTGTTATCAG 58.231 37.037 0.00 0.00 0.00 2.90
1299 1377 8.486210 AGGATGAAGTAGCAGTATTTGTTATCA 58.514 33.333 0.00 0.00 0.00 2.15
1300 1378 8.894768 AGGATGAAGTAGCAGTATTTGTTATC 57.105 34.615 0.00 0.00 0.00 1.75
1303 1381 9.686683 AAATAGGATGAAGTAGCAGTATTTGTT 57.313 29.630 0.00 0.00 0.00 2.83
1304 1382 9.686683 AAAATAGGATGAAGTAGCAGTATTTGT 57.313 29.630 0.00 0.00 0.00 2.83
1322 1400 5.807721 AGCAAAAGAGCAGCCTAAAATAGGA 60.808 40.000 7.61 0.00 42.13 2.94
1323 1401 4.400567 AGCAAAAGAGCAGCCTAAAATAGG 59.599 41.667 0.00 0.00 42.32 2.57
1324 1402 5.356470 AGAGCAAAAGAGCAGCCTAAAATAG 59.644 40.000 0.00 0.00 36.85 1.73
1325 1403 5.124457 CAGAGCAAAAGAGCAGCCTAAAATA 59.876 40.000 0.00 0.00 36.85 1.40
1326 1404 4.082354 CAGAGCAAAAGAGCAGCCTAAAAT 60.082 41.667 0.00 0.00 36.85 1.82
1327 1405 3.254166 CAGAGCAAAAGAGCAGCCTAAAA 59.746 43.478 0.00 0.00 36.85 1.52
1328 1406 2.816087 CAGAGCAAAAGAGCAGCCTAAA 59.184 45.455 0.00 0.00 36.85 1.85
1329 1407 2.430465 CAGAGCAAAAGAGCAGCCTAA 58.570 47.619 0.00 0.00 36.85 2.69
1330 1408 1.339438 CCAGAGCAAAAGAGCAGCCTA 60.339 52.381 0.00 0.00 36.85 3.93
1331 1409 0.608582 CCAGAGCAAAAGAGCAGCCT 60.609 55.000 0.00 0.00 36.85 4.58
1332 1410 1.593296 CCCAGAGCAAAAGAGCAGCC 61.593 60.000 0.00 0.00 36.85 4.85
1333 1411 1.881602 CCCAGAGCAAAAGAGCAGC 59.118 57.895 0.00 0.00 36.85 5.25
1334 1412 1.881602 GCCCAGAGCAAAAGAGCAG 59.118 57.895 0.00 0.00 42.97 4.24
1370 1448 0.399454 TTTGCAGAGAAGCAGCCTCT 59.601 50.000 0.00 0.00 46.54 3.69
1372 1450 1.920610 ATTTTGCAGAGAAGCAGCCT 58.079 45.000 0.00 0.00 46.54 4.58
1397 1962 4.099881 TGCCAAGAAGCTCTTTGAACAAAT 59.900 37.500 10.75 0.00 33.78 2.32
1398 1963 3.446873 TGCCAAGAAGCTCTTTGAACAAA 59.553 39.130 10.75 0.17 33.78 2.83
1498 2063 2.969821 TTAGGTTCCTGTGTGCCATT 57.030 45.000 1.12 0.00 0.00 3.16
1582 2199 9.534565 TCTAACTTCAACTTGATGCATATACTC 57.465 33.333 0.00 0.00 0.00 2.59
1588 2205 6.072286 CCTGTTCTAACTTCAACTTGATGCAT 60.072 38.462 0.00 0.00 0.00 3.96
1595 2212 3.565902 GCAGCCTGTTCTAACTTCAACTT 59.434 43.478 0.00 0.00 0.00 2.66
1597 2214 3.058639 CAGCAGCCTGTTCTAACTTCAAC 60.059 47.826 0.00 0.00 34.31 3.18
1598 2215 3.141398 CAGCAGCCTGTTCTAACTTCAA 58.859 45.455 0.00 0.00 34.31 2.69
1655 2272 5.239525 GTGAACAGCCAATACTTCTTTCAGT 59.760 40.000 0.00 0.00 0.00 3.41
1902 2966 2.528743 CGGCGCCATGACAGATGTC 61.529 63.158 28.98 6.01 44.97 3.06
1907 2971 2.969238 GATCCGGCGCCATGACAG 60.969 66.667 28.98 8.71 0.00 3.51
2030 3163 0.898320 TCTGAAGGAGAGAAAGGGCG 59.102 55.000 0.00 0.00 0.00 6.13
2183 3318 4.473196 TCCCTGACAGCCTGAATATTGTAA 59.527 41.667 0.00 0.00 0.00 2.41
2570 3760 4.581824 GGAAACCCTTTTTCGGTAAAGACT 59.418 41.667 10.50 0.00 37.31 3.24
2571 3761 4.863491 GGAAACCCTTTTTCGGTAAAGAC 58.137 43.478 10.50 0.00 37.31 3.01
2856 4053 2.520982 CTCCCCTCCGTATGCCGA 60.521 66.667 0.00 0.00 39.56 5.54
3770 5005 1.210478 ACTGTAATAGTGCCTGCAGGG 59.790 52.381 33.46 15.81 38.49 4.45
3771 5006 2.698855 ACTGTAATAGTGCCTGCAGG 57.301 50.000 29.34 29.34 38.49 4.85
3780 5015 5.709164 ACTACACTTCGGACACTGTAATAGT 59.291 40.000 0.00 0.00 41.36 2.12
3781 5016 6.093771 AGACTACACTTCGGACACTGTAATAG 59.906 42.308 0.00 0.00 0.00 1.73
3782 5017 5.942236 AGACTACACTTCGGACACTGTAATA 59.058 40.000 0.00 0.00 0.00 0.98
3783 5018 4.765856 AGACTACACTTCGGACACTGTAAT 59.234 41.667 0.00 0.00 0.00 1.89
3784 5019 4.139786 AGACTACACTTCGGACACTGTAA 58.860 43.478 0.00 0.00 0.00 2.41
3785 5020 3.748083 AGACTACACTTCGGACACTGTA 58.252 45.455 0.00 0.00 0.00 2.74
3786 5021 2.584236 AGACTACACTTCGGACACTGT 58.416 47.619 0.00 0.00 0.00 3.55
3787 5022 3.644884 AAGACTACACTTCGGACACTG 57.355 47.619 0.00 0.00 0.00 3.66
3788 5023 4.098960 TCAAAAGACTACACTTCGGACACT 59.901 41.667 0.00 0.00 0.00 3.55
3789 5024 4.365723 TCAAAAGACTACACTTCGGACAC 58.634 43.478 0.00 0.00 0.00 3.67
3790 5025 4.659111 TCAAAAGACTACACTTCGGACA 57.341 40.909 0.00 0.00 0.00 4.02
3791 5026 5.227908 TGATCAAAAGACTACACTTCGGAC 58.772 41.667 0.00 0.00 0.00 4.79
3792 5027 5.243060 TCTGATCAAAAGACTACACTTCGGA 59.757 40.000 0.00 0.00 0.00 4.55
3793 5028 5.346281 GTCTGATCAAAAGACTACACTTCGG 59.654 44.000 0.00 0.00 40.77 4.30
3794 5029 5.920840 TGTCTGATCAAAAGACTACACTTCG 59.079 40.000 13.05 0.00 43.69 3.79
3795 5030 7.897575 ATGTCTGATCAAAAGACTACACTTC 57.102 36.000 13.05 0.00 43.69 3.01
4409 5817 1.068250 GGACATAGTGAGGCTCGGC 59.932 63.158 10.42 5.39 0.00 5.54
4846 6262 1.600957 CAGCGTAATCCTTGCAGATGG 59.399 52.381 0.00 0.00 0.00 3.51
5051 6467 1.140052 ACCATTGTCACTTCACCGTCA 59.860 47.619 0.00 0.00 0.00 4.35
5155 6573 2.691409 TTAAGTTGGCGATCCTGAGG 57.309 50.000 0.00 0.00 0.00 3.86
5341 6781 4.401519 TCACCTCGACCTTAACTGGATAAG 59.598 45.833 0.00 0.00 33.54 1.73
5378 6818 3.562973 ACTCAGCATGTTCTTTGTCACTG 59.437 43.478 0.00 0.00 37.40 3.66
5573 7019 4.875561 AACTGTCTAGGTCTTCCAGTTC 57.124 45.455 0.00 0.00 41.20 3.01
5637 7083 8.004087 ACATTAGTCATTAGTACGGAAAGCTA 57.996 34.615 0.00 0.00 0.00 3.32
5645 7091 6.752351 ACAGCAGAACATTAGTCATTAGTACG 59.248 38.462 0.00 0.00 0.00 3.67
5674 7120 4.345257 TCTCTGGGAAAGGTCTGCATATAC 59.655 45.833 0.00 0.00 0.00 1.47
5689 7135 0.902984 TAGCCGCAAAGTCTCTGGGA 60.903 55.000 0.00 0.00 0.00 4.37
5698 7144 0.302890 CGAGATGCTTAGCCGCAAAG 59.697 55.000 0.29 0.00 44.06 2.77
5731 7177 0.102120 GTCTCAGGAGCAGGATGTCG 59.898 60.000 0.00 0.00 39.31 4.35
5869 7315 1.318576 TCAGCTCGAAGACACAGACA 58.681 50.000 0.00 0.00 0.00 3.41
5908 7354 1.438651 AAACGTGGACCATCATCGTG 58.561 50.000 8.46 0.00 35.00 4.35
5962 7408 5.393461 GCTACGCAGGAACCTAACTAGTTAA 60.393 44.000 15.95 1.43 0.00 2.01
5970 7416 0.108329 GCAGCTACGCAGGAACCTAA 60.108 55.000 0.00 0.00 0.00 2.69
6076 7535 5.759506 ACATTCACATGGTACGTTTCAAA 57.240 34.783 0.00 0.00 34.27 2.69
6078 7537 4.816925 TGAACATTCACATGGTACGTTTCA 59.183 37.500 0.00 0.00 34.27 2.69
6089 7583 6.860080 GTGAATCAGGAATGAACATTCACAT 58.140 36.000 23.03 12.04 46.70 3.21
6102 7596 1.634973 TCATGGCTGGTGAATCAGGAA 59.365 47.619 0.00 0.00 35.43 3.36
6217 7738 6.236017 TCAGTCAACCGATTTACATTCAAC 57.764 37.500 0.00 0.00 0.00 3.18
6261 7788 2.950781 CTATCCACTAGCTGGGACTCA 58.049 52.381 0.85 0.00 41.06 3.41
6369 7897 7.558807 TCCTAGTCGATCACCACTTAAAGAATA 59.441 37.037 0.00 0.00 0.00 1.75
6370 7898 6.380274 TCCTAGTCGATCACCACTTAAAGAAT 59.620 38.462 0.00 0.00 0.00 2.40
6483 8013 3.980646 TGAATTTTGCAACTACACGCT 57.019 38.095 0.00 0.00 0.00 5.07
6532 8192 5.633830 AATTTGCTCGACATGTTTCTGAT 57.366 34.783 0.00 0.00 0.00 2.90
6558 8218 3.520721 TGATGTTGTGATCATCCACTCCT 59.479 43.478 0.00 0.00 40.38 3.69
6591 8251 9.360093 TCAAAAATAAAATATGTTAGCGGTTGG 57.640 29.630 0.00 0.00 0.00 3.77
6828 8488 4.993029 TTGGGTCCTAACACAAACAAAG 57.007 40.909 0.00 0.00 45.70 2.77
6891 8558 2.489619 GCATAGATGGAATGGCCTGGAA 60.490 50.000 3.32 0.00 37.63 3.53
7077 8827 0.592637 CCTGCTTGTCGAATGCACAA 59.407 50.000 0.00 0.00 32.91 3.33
7083 8833 0.036732 TGCTTCCCTGCTTGTCGAAT 59.963 50.000 0.00 0.00 0.00 3.34
7092 8842 0.463474 GGATCTCACTGCTTCCCTGC 60.463 60.000 0.00 0.00 0.00 4.85
7161 8933 8.679100 GCTCTACTACTTTTCTCTCATTGAGTA 58.321 37.037 13.23 0.96 43.13 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.