Multiple sequence alignment - TraesCS5B01G072900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G072900 chr5B 100.000 7454 0 0 1 7454 85916829 85909376 0.000000e+00 13766.0
1 TraesCS5B01G072900 chr5B 87.407 2827 316 17 3325 6121 88172352 88175168 0.000000e+00 3212.0
2 TraesCS5B01G072900 chr5B 76.237 2163 390 78 70 2160 88165346 88167456 0.000000e+00 1033.0
3 TraesCS5B01G072900 chr5B 94.558 441 15 2 7014 7454 160136760 160137191 0.000000e+00 673.0
4 TraesCS5B01G072900 chr5B 87.613 444 48 4 7012 7454 373033891 373033454 6.670000e-140 508.0
5 TraesCS5B01G072900 chr5B 86.099 446 46 12 7013 7454 690709111 690709544 4.070000e-127 466.0
6 TraesCS5B01G072900 chr5B 94.737 133 7 0 3199 3331 85913505 85913373 2.730000e-49 207.0
7 TraesCS5B01G072900 chr5B 94.737 133 7 0 3325 3457 85913631 85913499 2.730000e-49 207.0
8 TraesCS5B01G072900 chr5B 84.896 192 29 0 3140 3331 88172293 88172484 2.120000e-45 195.0
9 TraesCS5B01G072900 chr5B 87.500 48 6 0 6156 6203 88175309 88175356 1.000000e-03 56.5
10 TraesCS5B01G072900 chr5D 96.691 4322 110 9 2701 7014 77001539 76997243 0.000000e+00 7158.0
11 TraesCS5B01G072900 chr5D 97.226 2379 44 7 255 2620 77009118 77006749 0.000000e+00 4008.0
12 TraesCS5B01G072900 chr5D 87.548 2851 310 22 3325 6144 78318840 78321676 0.000000e+00 3256.0
13 TraesCS5B01G072900 chr5D 76.006 2163 394 84 70 2160 78311963 78314072 0.000000e+00 1003.0
14 TraesCS5B01G072900 chr5D 93.885 278 17 0 34 311 77009398 77009121 3.220000e-113 420.0
15 TraesCS5B01G072900 chr5D 94.737 133 7 0 3199 3331 77000914 77000782 2.730000e-49 207.0
16 TraesCS5B01G072900 chr5D 94.737 133 7 0 3325 3457 77001040 77000908 2.730000e-49 207.0
17 TraesCS5B01G072900 chr5D 83.598 189 31 0 3140 3328 78318781 78318969 2.140000e-40 178.0
18 TraesCS5B01G072900 chr5D 96.825 63 2 0 2615 2677 77001598 77001536 1.020000e-18 106.0
19 TraesCS5B01G072900 chr5D 100.000 30 0 0 2674 2703 7744533 7744562 1.000000e-03 56.5
20 TraesCS5B01G072900 chr5D 96.875 32 0 1 2673 2704 24067599 24067629 1.400000e-02 52.8
21 TraesCS5B01G072900 chr5A 96.845 3772 97 10 3255 7014 73809311 73805550 0.000000e+00 6287.0
22 TraesCS5B01G072900 chr5A 96.680 2711 69 9 255 2955 73817415 73814716 0.000000e+00 4488.0
23 TraesCS5B01G072900 chr5A 87.607 2816 312 14 3325 6112 74746761 74749567 0.000000e+00 3232.0
24 TraesCS5B01G072900 chr5A 76.109 2164 386 88 70 2160 74739886 74741991 0.000000e+00 1011.0
25 TraesCS5B01G072900 chr5A 97.391 345 8 1 2951 3294 73809646 73809302 3.000000e-163 586.0
26 TraesCS5B01G072900 chr5A 92.926 311 22 0 1 311 73817728 73817418 3.170000e-123 453.0
27 TraesCS5B01G072900 chr5A 95.489 133 6 0 3199 3331 73809241 73809109 5.860000e-51 213.0
28 TraesCS5B01G072900 chr5A 86.250 160 22 0 3172 3331 74746734 74746893 2.760000e-39 174.0
29 TraesCS5B01G072900 chr5A 89.744 78 6 2 3381 3457 73809311 73809235 1.710000e-16 99.0
30 TraesCS5B01G072900 chr5A 100.000 31 0 0 2674 2704 324400957 324400987 2.900000e-04 58.4
31 TraesCS5B01G072900 chr1D 87.225 454 36 20 7010 7454 291798697 291798257 1.440000e-136 497.0
32 TraesCS5B01G072900 chr1D 100.000 33 0 0 2674 2706 10846699 10846667 2.250000e-05 62.1
33 TraesCS5B01G072900 chr1D 100.000 30 0 0 2674 2703 474108541 474108512 1.000000e-03 56.5
34 TraesCS5B01G072900 chr1D 100.000 28 0 0 2673 2700 127495713 127495686 1.400000e-02 52.8
35 TraesCS5B01G072900 chr7A 86.742 445 51 6 7011 7454 645324890 645325327 8.690000e-134 488.0
36 TraesCS5B01G072900 chr7A 100.000 32 0 0 2674 2705 54837295 54837326 8.080000e-05 60.2
37 TraesCS5B01G072900 chr6A 86.414 449 46 10 7011 7454 151513357 151513795 1.880000e-130 477.0
38 TraesCS5B01G072900 chr6A 79.845 387 70 7 5308 5690 531556044 531556426 7.370000e-70 276.0
39 TraesCS5B01G072900 chr6A 94.444 36 1 1 2672 2707 457559153 457559187 4.000000e-03 54.7
40 TraesCS5B01G072900 chr1A 86.517 445 47 10 7013 7454 438320917 438320483 1.880000e-130 477.0
41 TraesCS5B01G072900 chr1A 80.654 367 62 7 5316 5677 514686939 514687301 7.370000e-70 276.0
42 TraesCS5B01G072900 chr1A 100.000 29 0 0 2674 2702 97961420 97961448 4.000000e-03 54.7
43 TraesCS5B01G072900 chr6D 86.261 444 45 14 7015 7452 27464201 27463768 1.130000e-127 468.0
44 TraesCS5B01G072900 chr6D 100.000 31 0 0 2674 2704 431308380 431308410 2.900000e-04 58.4
45 TraesCS5B01G072900 chr6D 94.444 36 2 0 2674 2709 260042855 260042820 1.000000e-03 56.5
46 TraesCS5B01G072900 chr6D 100.000 29 0 0 2674 2702 27464175 27464203 4.000000e-03 54.7
47 TraesCS5B01G072900 chr6D 96.970 33 0 1 2674 2705 452319716 452319684 4.000000e-03 54.7
48 TraesCS5B01G072900 chr6D 100.000 28 0 0 2674 2701 397365109 397365136 1.400000e-02 52.8
49 TraesCS5B01G072900 chr7D 86.062 452 41 19 7012 7454 388652854 388652416 4.070000e-127 466.0
50 TraesCS5B01G072900 chr4A 80.811 370 62 7 5316 5680 104119659 104119294 1.580000e-71 281.0
51 TraesCS5B01G072900 chr2B 85.057 174 25 1 3325 3498 503434326 503434154 7.690000e-40 176.0
52 TraesCS5B01G072900 chr2B 84.000 175 25 3 3325 3498 6993189 6993017 1.660000e-36 165.0
53 TraesCS5B01G072900 chr3D 100.000 30 0 0 2674 2703 511289543 511289514 1.000000e-03 56.5
54 TraesCS5B01G072900 chr4D 100.000 28 0 0 2673 2700 28876851 28876824 1.400000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G072900 chr5B 85909376 85916829 7453 True 4726.666667 13766 96.491333 1 7454 3 chr5B.!!$R2 7453
1 TraesCS5B01G072900 chr5B 88172293 88175356 3063 False 1154.500000 3212 86.601000 3140 6203 3 chr5B.!!$F4 3063
2 TraesCS5B01G072900 chr5B 88165346 88167456 2110 False 1033.000000 1033 76.237000 70 2160 1 chr5B.!!$F1 2090
3 TraesCS5B01G072900 chr5D 77006749 77009398 2649 True 2214.000000 4008 95.555500 34 2620 2 chr5D.!!$R2 2586
4 TraesCS5B01G072900 chr5D 76997243 77001598 4355 True 1919.500000 7158 95.747500 2615 7014 4 chr5D.!!$R1 4399
5 TraesCS5B01G072900 chr5D 78318781 78321676 2895 False 1717.000000 3256 85.573000 3140 6144 2 chr5D.!!$F4 3004
6 TraesCS5B01G072900 chr5D 78311963 78314072 2109 False 1003.000000 1003 76.006000 70 2160 1 chr5D.!!$F3 2090
7 TraesCS5B01G072900 chr5A 73814716 73817728 3012 True 2470.500000 4488 94.803000 1 2955 2 chr5A.!!$R2 2954
8 TraesCS5B01G072900 chr5A 73805550 73809646 4096 True 1796.250000 6287 94.867250 2951 7014 4 chr5A.!!$R1 4063
9 TraesCS5B01G072900 chr5A 74746734 74749567 2833 False 1703.000000 3232 86.928500 3172 6112 2 chr5A.!!$F3 2940
10 TraesCS5B01G072900 chr5A 74739886 74741991 2105 False 1011.000000 1011 76.109000 70 2160 1 chr5A.!!$F1 2090

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 735 0.740149 CACAAGGCTTGTTGCTGACA 59.260 50.000 29.32 0.00 43.23 3.58 F
1260 1373 2.389715 CCGGGTCTGAAAGGTAGATCT 58.610 52.381 0.00 0.00 0.00 2.75 F
2335 2464 0.543277 TGCGGAAGAATGCCATCTCT 59.457 50.000 0.00 0.00 25.52 3.10 F
4036 4202 3.059166 CAGCAGGTTTTGTTGTATTGCC 58.941 45.455 0.00 0.00 33.74 4.52 F
4912 5081 1.003116 CATATTCTGCGCAAGGACAGC 60.003 52.381 13.05 0.00 33.80 4.40 F
5214 5383 3.303406 GTCAAGCAGATCAACTTGTTGC 58.697 45.455 20.68 9.47 43.05 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2274 2403 2.851263 TGGTAAATTGAGACCGCAGT 57.149 45.000 1.26 0.0 38.69 4.40 R
3049 3184 2.805194 TGCATTGATCCAACCACATCA 58.195 42.857 0.00 0.0 0.00 3.07 R
4292 4458 1.131638 TCAGGCAGACTCACAACCTT 58.868 50.000 0.00 0.0 0.00 3.50 R
5210 5379 0.318955 ATTGCTTCAGCCAACGCAAC 60.319 50.000 2.52 0.0 44.07 4.17 R
5848 6040 0.321122 CAGCTCACCAGGTTCTCCAC 60.321 60.000 0.00 0.0 35.89 4.02 R
7188 7513 0.033601 TCCTGTGTTGGGCTTGTTGT 60.034 50.000 0.00 0.0 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.463443 GCAAGTGTGTATTTTAGTTCTGAATTT 57.537 29.630 0.00 0.00 0.00 1.82
39 40 2.703416 TCTGAATTTGAGTCAGCGCAT 58.297 42.857 11.47 0.00 41.94 4.73
40 41 2.417586 TCTGAATTTGAGTCAGCGCATG 59.582 45.455 11.47 5.22 41.94 4.06
53 54 1.959899 GCGCATGTGTTGGAGAGTCG 61.960 60.000 0.30 0.00 0.00 4.18
213 214 0.884704 TTGGACAGCCAGAAACTCGC 60.885 55.000 0.00 0.00 46.91 5.03
222 223 2.413371 GCCAGAAACTCGCTTCACATTC 60.413 50.000 0.00 0.00 0.00 2.67
273 274 3.571401 AGGTCAGCTTCAAAACAATCTGG 59.429 43.478 0.00 0.00 0.00 3.86
300 360 2.680339 GCTCTTGTGCTAATCCTTGGAC 59.320 50.000 0.00 0.00 0.00 4.02
353 420 4.909880 GCTTTTTCTAGTTGCTGGTTTACG 59.090 41.667 0.00 0.00 0.00 3.18
360 427 2.552315 AGTTGCTGGTTTACGAATGGTG 59.448 45.455 0.00 0.00 0.00 4.17
491 566 8.531530 GTTAAACATTAAGTTGTTTGCAGACTG 58.468 33.333 14.61 0.00 46.43 3.51
492 567 5.186996 ACATTAAGTTGTTTGCAGACTGG 57.813 39.130 9.02 0.00 0.00 4.00
493 568 4.887071 ACATTAAGTTGTTTGCAGACTGGA 59.113 37.500 9.02 0.00 0.00 3.86
494 569 5.536161 ACATTAAGTTGTTTGCAGACTGGAT 59.464 36.000 9.02 0.00 0.00 3.41
647 722 5.939883 TCCTCTGTTGATTGATAACACAAGG 59.060 40.000 0.00 0.00 37.30 3.61
660 735 0.740149 CACAAGGCTTGTTGCTGACA 59.260 50.000 29.32 0.00 43.23 3.58
693 768 8.090831 TGATGTGTCTTATACTGCTATGGATTC 58.909 37.037 0.00 0.00 0.00 2.52
1018 1114 7.381139 CACTTTTGATGCAGGTAAATACGTTTT 59.619 33.333 0.00 0.00 0.00 2.43
1260 1373 2.389715 CCGGGTCTGAAAGGTAGATCT 58.610 52.381 0.00 0.00 0.00 2.75
1331 1444 9.859427 CCAATCCGTTGATATATGCATTTAAAT 57.141 29.630 3.54 0.00 37.53 1.40
1669 1787 3.686016 TGTTTTCCCTTGATGTCTAGCC 58.314 45.455 0.00 0.00 0.00 3.93
1812 1937 4.461781 AGAAAGCATGAGATCTTGTTTGGG 59.538 41.667 0.00 0.00 0.00 4.12
2335 2464 0.543277 TGCGGAAGAATGCCATCTCT 59.457 50.000 0.00 0.00 25.52 3.10
2783 2917 5.866092 GGATTTTTGCAGAAATCTGTCCTTC 59.134 40.000 30.58 15.78 45.45 3.46
2784 2918 6.294955 GGATTTTTGCAGAAATCTGTCCTTCT 60.295 38.462 30.58 4.20 45.45 2.85
2785 2919 6.469782 TTTTTGCAGAAATCTGTCCTTCTT 57.530 33.333 11.77 0.00 45.45 2.52
2795 2929 7.554476 AGAAATCTGTCCTTCTTTAGGTTATGC 59.446 37.037 0.00 0.00 45.03 3.14
2796 2930 5.755409 TCTGTCCTTCTTTAGGTTATGCA 57.245 39.130 0.00 0.00 45.03 3.96
3028 3163 4.032960 TCAATTCACCACTGTATTGGCT 57.967 40.909 0.00 0.00 40.77 4.75
3049 3184 4.142227 GCTCTGCAAGACATGATGGAATTT 60.142 41.667 0.00 0.00 38.67 1.82
3101 3236 7.599630 ATTTATTTTGGCATACAAGCAACAG 57.400 32.000 0.00 0.00 40.82 3.16
3377 3542 6.492007 AATGTCTTGCACTACAGAAATCAG 57.508 37.500 6.48 0.00 0.00 2.90
3714 3880 3.181490 GCGGAGAACCTTGAGTTTGTTTT 60.181 43.478 0.00 0.00 39.40 2.43
4028 4194 3.489059 CGACATCAACAGCAGGTTTTGTT 60.489 43.478 0.00 0.00 37.72 2.83
4036 4202 3.059166 CAGCAGGTTTTGTTGTATTGCC 58.941 45.455 0.00 0.00 33.74 4.52
4285 4451 7.827819 TCTCAATAGAATGTTAAAGGACACG 57.172 36.000 0.00 0.00 31.30 4.49
4292 4458 6.170506 AGAATGTTAAAGGACACGATGCTTA 58.829 36.000 0.00 0.00 38.17 3.09
4315 4481 2.037251 GGTTGTGAGTCTGCCTGAAGTA 59.963 50.000 0.00 0.00 0.00 2.24
4316 4482 3.060602 GTTGTGAGTCTGCCTGAAGTAC 58.939 50.000 0.00 0.00 0.00 2.73
4826 4995 4.724399 TGAGTTGAAAGCCAAGGTCATTA 58.276 39.130 0.00 0.00 35.03 1.90
4911 5080 2.283298 ACATATTCTGCGCAAGGACAG 58.717 47.619 13.05 3.06 38.28 3.51
4912 5081 1.003116 CATATTCTGCGCAAGGACAGC 60.003 52.381 13.05 0.00 33.80 4.40
5023 5192 7.376435 ACAAATGTACATCGATGAACAATCA 57.624 32.000 31.33 18.14 40.57 2.57
5162 5331 3.696051 GGGCTTGTCATTTGATCTTAGCA 59.304 43.478 0.00 0.00 0.00 3.49
5210 5379 4.843220 AAAGGTCAAGCAGATCAACTTG 57.157 40.909 17.31 17.31 43.73 3.16
5214 5383 3.303406 GTCAAGCAGATCAACTTGTTGC 58.697 45.455 20.68 9.47 43.05 4.17
5244 5413 7.436376 GGCTGAAGCAATTAAATCATTAGAACC 59.564 37.037 4.43 0.00 44.36 3.62
5579 5748 4.379302 AATGACTTCTCCAAGCTTTCCT 57.621 40.909 0.00 0.00 32.09 3.36
5712 5904 4.745125 GCGTATCTCTTAATACTGCTTGCA 59.255 41.667 0.00 0.00 33.19 4.08
5735 5927 8.474025 TGCATTAATTTCCTTGTATAACCCTTG 58.526 33.333 0.00 0.00 0.00 3.61
5834 6026 4.954092 GGTCAGTTGATGATCTTGGAAC 57.046 45.455 0.00 0.00 40.92 3.62
5848 6040 4.256110 TCTTGGAACTGATGTATGTGCTG 58.744 43.478 0.00 0.00 0.00 4.41
5892 6084 8.421784 TGTCTACTTCTACTTCAGTGTTGATTT 58.578 33.333 0.00 0.00 32.27 2.17
6095 6287 8.742777 TCTGTGGAAGATAAAAGGATTGATTTG 58.257 33.333 0.00 0.00 0.00 2.32
6159 6458 6.871492 CCAATTCCAATGTTGTAAGGTTAACC 59.129 38.462 17.41 17.41 0.00 2.85
6193 6492 2.319844 TCTCCTGCAGACACTCAAGAA 58.680 47.619 17.39 0.00 0.00 2.52
6207 6506 9.155975 AGACACTCAAGAAATGTACATAATGAC 57.844 33.333 9.21 0.00 0.00 3.06
6355 6654 2.706339 AGATCCCAGAGTGCAACATC 57.294 50.000 0.00 0.00 41.43 3.06
6422 6721 3.365969 CGCAACTACAAAAATCCCTCACC 60.366 47.826 0.00 0.00 0.00 4.02
6428 6727 4.993705 ACAAAAATCCCTCACCAGACTA 57.006 40.909 0.00 0.00 0.00 2.59
6429 6728 5.520748 ACAAAAATCCCTCACCAGACTAT 57.479 39.130 0.00 0.00 0.00 2.12
6430 6729 6.636454 ACAAAAATCCCTCACCAGACTATA 57.364 37.500 0.00 0.00 0.00 1.31
6431 6730 6.653989 ACAAAAATCCCTCACCAGACTATAG 58.346 40.000 0.00 0.00 0.00 1.31
6432 6731 4.965200 AAATCCCTCACCAGACTATAGC 57.035 45.455 0.00 0.00 0.00 2.97
6433 6732 3.913370 ATCCCTCACCAGACTATAGCT 57.087 47.619 0.00 0.00 0.00 3.32
6434 6733 2.950781 TCCCTCACCAGACTATAGCTG 58.049 52.381 13.93 13.93 0.00 4.24
6443 6742 4.052159 CAGACTATAGCTGGGTCAACAG 57.948 50.000 13.35 0.00 41.41 3.16
6449 6748 4.085876 CTGGGTCAACAGCTTGGG 57.914 61.111 0.00 0.00 0.00 4.12
6450 6749 1.604593 CTGGGTCAACAGCTTGGGG 60.605 63.158 0.00 0.00 0.00 4.96
6593 6918 7.451255 TGATTGATGGTGAACCTAACTTGAAAT 59.549 33.333 0.37 0.00 36.82 2.17
6595 6920 6.980593 TGATGGTGAACCTAACTTGAAATTG 58.019 36.000 0.37 0.00 36.82 2.32
6596 6921 6.775142 TGATGGTGAACCTAACTTGAAATTGA 59.225 34.615 0.37 0.00 36.82 2.57
6597 6922 6.633500 TGGTGAACCTAACTTGAAATTGAG 57.367 37.500 0.37 0.00 36.82 3.02
6598 6923 6.126409 TGGTGAACCTAACTTGAAATTGAGT 58.874 36.000 0.37 0.00 36.82 3.41
6600 6925 7.776030 TGGTGAACCTAACTTGAAATTGAGTTA 59.224 33.333 0.37 8.29 37.32 2.24
6690 7015 2.533266 TCTCCAGTGCAGAGACAAAC 57.467 50.000 0.22 0.00 35.46 2.93
6715 7040 2.792674 CCATGCTTTATGCGCTTCATTG 59.207 45.455 9.73 0.00 46.63 2.82
6816 7141 1.236628 CTGCTCATGCCCTATTCTGC 58.763 55.000 0.00 0.00 38.71 4.26
6867 7192 5.730296 ATCTTCCCTATCTGTGGTATTCG 57.270 43.478 0.00 0.00 0.00 3.34
7014 7339 7.872061 ATGTGGATAGGGTATCTGAACATTA 57.128 36.000 0.00 0.00 33.82 1.90
7015 7340 7.062749 TGTGGATAGGGTATCTGAACATTAC 57.937 40.000 0.00 0.00 35.52 1.89
7016 7341 6.042781 TGTGGATAGGGTATCTGAACATTACC 59.957 42.308 0.00 0.00 35.52 2.85
7024 7349 6.863275 GGTATCTGAACATTACCCAAAAAGG 58.137 40.000 0.00 0.00 31.12 3.11
7025 7350 4.864704 TCTGAACATTACCCAAAAAGGC 57.135 40.909 0.00 0.00 35.39 4.35
7026 7351 4.479158 TCTGAACATTACCCAAAAAGGCT 58.521 39.130 0.00 0.00 35.39 4.58
7027 7352 4.898861 TCTGAACATTACCCAAAAAGGCTT 59.101 37.500 0.00 0.00 35.39 4.35
7028 7353 5.365314 TCTGAACATTACCCAAAAAGGCTTT 59.635 36.000 6.68 6.68 35.39 3.51
7029 7354 5.606505 TGAACATTACCCAAAAAGGCTTTC 58.393 37.500 13.76 0.00 35.39 2.62
7030 7355 4.251543 ACATTACCCAAAAAGGCTTTCG 57.748 40.909 13.76 7.62 35.39 3.46
7031 7356 2.804697 TTACCCAAAAAGGCTTTCGC 57.195 45.000 13.76 0.00 35.39 4.70
7041 7366 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
7042 7367 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
7043 7368 1.018910 GCTTTCGCCCCGCTTTATAA 58.981 50.000 0.00 0.00 0.00 0.98
7044 7369 1.402613 GCTTTCGCCCCGCTTTATAAA 59.597 47.619 0.00 0.00 0.00 1.40
7045 7370 2.034179 GCTTTCGCCCCGCTTTATAAAT 59.966 45.455 0.00 0.00 0.00 1.40
7046 7371 3.251487 GCTTTCGCCCCGCTTTATAAATA 59.749 43.478 0.00 0.00 0.00 1.40
7047 7372 4.261280 GCTTTCGCCCCGCTTTATAAATAA 60.261 41.667 0.00 0.00 0.00 1.40
7048 7373 5.733937 GCTTTCGCCCCGCTTTATAAATAAA 60.734 40.000 0.00 0.00 0.00 1.40
7061 7386 8.185003 CTTTATAAATAAAGCAACCACCAAGC 57.815 34.615 9.01 0.00 41.69 4.01
7062 7387 5.736951 ATAAATAAAGCAACCACCAAGCA 57.263 34.783 0.00 0.00 0.00 3.91
7063 7388 3.385193 AATAAAGCAACCACCAAGCAC 57.615 42.857 0.00 0.00 0.00 4.40
7064 7389 1.769026 TAAAGCAACCACCAAGCACA 58.231 45.000 0.00 0.00 0.00 4.57
7065 7390 0.901124 AAAGCAACCACCAAGCACAA 59.099 45.000 0.00 0.00 0.00 3.33
7066 7391 0.901124 AAGCAACCACCAAGCACAAA 59.099 45.000 0.00 0.00 0.00 2.83
7067 7392 0.461135 AGCAACCACCAAGCACAAAG 59.539 50.000 0.00 0.00 0.00 2.77
7068 7393 0.175531 GCAACCACCAAGCACAAAGT 59.824 50.000 0.00 0.00 0.00 2.66
7069 7394 1.407258 GCAACCACCAAGCACAAAGTA 59.593 47.619 0.00 0.00 0.00 2.24
7070 7395 2.798145 GCAACCACCAAGCACAAAGTAC 60.798 50.000 0.00 0.00 0.00 2.73
7071 7396 1.687563 ACCACCAAGCACAAAGTACC 58.312 50.000 0.00 0.00 0.00 3.34
7072 7397 1.064314 ACCACCAAGCACAAAGTACCA 60.064 47.619 0.00 0.00 0.00 3.25
7073 7398 2.028130 CCACCAAGCACAAAGTACCAA 58.972 47.619 0.00 0.00 0.00 3.67
7074 7399 2.034558 CCACCAAGCACAAAGTACCAAG 59.965 50.000 0.00 0.00 0.00 3.61
7075 7400 2.034558 CACCAAGCACAAAGTACCAAGG 59.965 50.000 0.00 0.00 0.00 3.61
7076 7401 2.306847 CCAAGCACAAAGTACCAAGGT 58.693 47.619 0.00 0.00 0.00 3.50
7077 7402 2.293399 CCAAGCACAAAGTACCAAGGTC 59.707 50.000 0.00 0.00 0.00 3.85
7078 7403 2.948979 CAAGCACAAAGTACCAAGGTCA 59.051 45.455 0.00 0.00 0.00 4.02
7079 7404 2.572290 AGCACAAAGTACCAAGGTCAC 58.428 47.619 0.00 0.00 0.00 3.67
7080 7405 2.092646 AGCACAAAGTACCAAGGTCACA 60.093 45.455 0.00 0.00 0.00 3.58
7081 7406 2.685897 GCACAAAGTACCAAGGTCACAA 59.314 45.455 0.00 0.00 0.00 3.33
7082 7407 3.488553 GCACAAAGTACCAAGGTCACAAC 60.489 47.826 0.00 0.00 0.00 3.32
7083 7408 3.692101 CACAAAGTACCAAGGTCACAACA 59.308 43.478 0.00 0.00 0.00 3.33
7084 7409 4.156922 CACAAAGTACCAAGGTCACAACAA 59.843 41.667 0.00 0.00 0.00 2.83
7085 7410 4.767928 ACAAAGTACCAAGGTCACAACAAA 59.232 37.500 0.00 0.00 0.00 2.83
7086 7411 5.244178 ACAAAGTACCAAGGTCACAACAAAA 59.756 36.000 0.00 0.00 0.00 2.44
7087 7412 4.976224 AGTACCAAGGTCACAACAAAAC 57.024 40.909 0.00 0.00 0.00 2.43
7088 7413 2.931512 ACCAAGGTCACAACAAAACG 57.068 45.000 0.00 0.00 0.00 3.60
7089 7414 1.135228 ACCAAGGTCACAACAAAACGC 60.135 47.619 0.00 0.00 0.00 4.84
7090 7415 1.135257 CCAAGGTCACAACAAAACGCA 60.135 47.619 0.00 0.00 0.00 5.24
7091 7416 1.917303 CAAGGTCACAACAAAACGCAC 59.083 47.619 0.00 0.00 0.00 5.34
7092 7417 0.454196 AGGTCACAACAAAACGCACC 59.546 50.000 0.00 0.00 0.00 5.01
7093 7418 0.171455 GGTCACAACAAAACGCACCA 59.829 50.000 0.00 0.00 0.00 4.17
7094 7419 1.264672 GTCACAACAAAACGCACCAC 58.735 50.000 0.00 0.00 0.00 4.16
7095 7420 0.881796 TCACAACAAAACGCACCACA 59.118 45.000 0.00 0.00 0.00 4.17
7096 7421 0.988439 CACAACAAAACGCACCACAC 59.012 50.000 0.00 0.00 0.00 3.82
7097 7422 0.598562 ACAACAAAACGCACCACACA 59.401 45.000 0.00 0.00 0.00 3.72
7098 7423 0.988439 CAACAAAACGCACCACACAC 59.012 50.000 0.00 0.00 0.00 3.82
7099 7424 0.455295 AACAAAACGCACCACACACG 60.455 50.000 0.00 0.00 0.00 4.49
7100 7425 2.101380 AAAACGCACCACACACGC 59.899 55.556 0.00 0.00 0.00 5.34
7101 7426 2.691771 AAAACGCACCACACACGCA 61.692 52.632 0.00 0.00 0.00 5.24
7102 7427 2.859034 AAAACGCACCACACACGCAC 62.859 55.000 0.00 0.00 0.00 5.34
7104 7429 4.589700 CGCACCACACACGCACAC 62.590 66.667 0.00 0.00 0.00 3.82
7105 7430 3.504273 GCACCACACACGCACACA 61.504 61.111 0.00 0.00 0.00 3.72
7106 7431 3.045277 GCACCACACACGCACACAA 62.045 57.895 0.00 0.00 0.00 3.33
7107 7432 1.503994 CACCACACACGCACACAAA 59.496 52.632 0.00 0.00 0.00 2.83
7108 7433 0.523125 CACCACACACGCACACAAAG 60.523 55.000 0.00 0.00 0.00 2.77
7109 7434 1.586042 CCACACACGCACACAAAGC 60.586 57.895 0.00 0.00 0.00 3.51
7110 7435 1.586042 CACACACGCACACAAAGCC 60.586 57.895 0.00 0.00 0.00 4.35
7111 7436 2.043405 ACACACGCACACAAAGCCA 61.043 52.632 0.00 0.00 0.00 4.75
7112 7437 1.586042 CACACGCACACAAAGCCAC 60.586 57.895 0.00 0.00 0.00 5.01
7113 7438 2.026014 CACGCACACAAAGCCACC 59.974 61.111 0.00 0.00 0.00 4.61
7114 7439 3.582120 ACGCACACAAAGCCACCG 61.582 61.111 0.00 0.00 0.00 4.94
7115 7440 4.980903 CGCACACAAAGCCACCGC 62.981 66.667 0.00 0.00 0.00 5.68
7116 7441 4.980903 GCACACAAAGCCACCGCG 62.981 66.667 0.00 0.00 41.18 6.46
7117 7442 4.326766 CACACAAAGCCACCGCGG 62.327 66.667 26.86 26.86 41.18 6.46
7133 7458 4.572571 GGCCCGGTCCAACACACA 62.573 66.667 0.00 0.00 0.00 3.72
7134 7459 3.284449 GCCCGGTCCAACACACAC 61.284 66.667 0.00 0.00 0.00 3.82
7135 7460 2.190843 CCCGGTCCAACACACACA 59.809 61.111 0.00 0.00 0.00 3.72
7136 7461 2.184167 CCCGGTCCAACACACACAC 61.184 63.158 0.00 0.00 0.00 3.82
7137 7462 1.450491 CCGGTCCAACACACACACA 60.450 57.895 0.00 0.00 0.00 3.72
7138 7463 1.711060 CCGGTCCAACACACACACAC 61.711 60.000 0.00 0.00 0.00 3.82
7139 7464 1.021920 CGGTCCAACACACACACACA 61.022 55.000 0.00 0.00 0.00 3.72
7140 7465 0.450184 GGTCCAACACACACACACAC 59.550 55.000 0.00 0.00 0.00 3.82
7141 7466 1.160989 GTCCAACACACACACACACA 58.839 50.000 0.00 0.00 0.00 3.72
7142 7467 1.135803 GTCCAACACACACACACACAC 60.136 52.381 0.00 0.00 0.00 3.82
7143 7468 0.877743 CCAACACACACACACACACA 59.122 50.000 0.00 0.00 0.00 3.72
7144 7469 1.400888 CCAACACACACACACACACAC 60.401 52.381 0.00 0.00 0.00 3.82
7145 7470 1.265365 CAACACACACACACACACACA 59.735 47.619 0.00 0.00 0.00 3.72
7146 7471 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
7147 7472 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
7148 7473 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
7149 7474 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
7150 7475 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
7151 7476 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
7152 7477 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
7153 7478 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
7154 7479 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
7155 7480 1.275010 ACACACACACACACACAGAGA 59.725 47.619 0.00 0.00 0.00 3.10
7156 7481 1.660607 CACACACACACACACAGAGAC 59.339 52.381 0.00 0.00 0.00 3.36
7157 7482 1.290203 CACACACACACACAGAGACC 58.710 55.000 0.00 0.00 0.00 3.85
7158 7483 0.901827 ACACACACACACAGAGACCA 59.098 50.000 0.00 0.00 0.00 4.02
7159 7484 1.277842 ACACACACACACAGAGACCAA 59.722 47.619 0.00 0.00 0.00 3.67
7160 7485 1.665679 CACACACACACAGAGACCAAC 59.334 52.381 0.00 0.00 0.00 3.77
7161 7486 1.277842 ACACACACACAGAGACCAACA 59.722 47.619 0.00 0.00 0.00 3.33
7162 7487 1.935873 CACACACACAGAGACCAACAG 59.064 52.381 0.00 0.00 0.00 3.16
7163 7488 1.831106 ACACACACAGAGACCAACAGA 59.169 47.619 0.00 0.00 0.00 3.41
7164 7489 2.205074 CACACACAGAGACCAACAGAC 58.795 52.381 0.00 0.00 0.00 3.51
7165 7490 1.139058 ACACACAGAGACCAACAGACC 59.861 52.381 0.00 0.00 0.00 3.85
7166 7491 1.414181 CACACAGAGACCAACAGACCT 59.586 52.381 0.00 0.00 0.00 3.85
7167 7492 2.628178 CACACAGAGACCAACAGACCTA 59.372 50.000 0.00 0.00 0.00 3.08
7168 7493 3.069586 CACACAGAGACCAACAGACCTAA 59.930 47.826 0.00 0.00 0.00 2.69
7169 7494 3.322254 ACACAGAGACCAACAGACCTAAG 59.678 47.826 0.00 0.00 0.00 2.18
7170 7495 3.322254 CACAGAGACCAACAGACCTAAGT 59.678 47.826 0.00 0.00 0.00 2.24
7171 7496 3.574826 ACAGAGACCAACAGACCTAAGTC 59.425 47.826 0.00 0.00 43.89 3.01
7172 7497 3.056465 CAGAGACCAACAGACCTAAGTCC 60.056 52.174 0.00 0.00 44.72 3.85
7173 7498 2.897969 GAGACCAACAGACCTAAGTCCA 59.102 50.000 0.00 0.00 44.72 4.02
7174 7499 2.900546 AGACCAACAGACCTAAGTCCAG 59.099 50.000 0.00 0.00 44.72 3.86
7175 7500 1.348036 ACCAACAGACCTAAGTCCAGC 59.652 52.381 0.00 0.00 44.72 4.85
7176 7501 1.625818 CCAACAGACCTAAGTCCAGCT 59.374 52.381 0.00 0.00 44.72 4.24
7177 7502 2.613977 CCAACAGACCTAAGTCCAGCTG 60.614 54.545 6.78 6.78 44.72 4.24
7178 7503 2.016905 ACAGACCTAAGTCCAGCTGT 57.983 50.000 13.81 0.00 44.72 4.40
7179 7504 1.620819 ACAGACCTAAGTCCAGCTGTG 59.379 52.381 13.81 4.33 44.72 3.66
7180 7505 1.066573 CAGACCTAAGTCCAGCTGTGG 60.067 57.143 13.81 0.00 44.72 4.17
7181 7506 0.250513 GACCTAAGTCCAGCTGTGGG 59.749 60.000 13.81 7.94 45.11 4.61
7187 7512 2.203337 TCCAGCTGTGGGCACAAC 60.203 61.111 13.81 0.00 45.11 3.32
7188 7513 2.519063 CCAGCTGTGGGCACAACA 60.519 61.111 13.81 0.00 44.79 3.33
7189 7514 2.723746 CAGCTGTGGGCACAACAC 59.276 61.111 5.25 0.00 44.79 3.32
7190 7515 2.120282 CAGCTGTGGGCACAACACA 61.120 57.895 5.25 0.00 45.76 3.72
7191 7516 1.379710 AGCTGTGGGCACAACACAA 60.380 52.632 0.00 0.00 46.98 3.33
7192 7517 1.226945 GCTGTGGGCACAACACAAC 60.227 57.895 0.00 0.00 46.98 3.32
7193 7518 1.943116 GCTGTGGGCACAACACAACA 61.943 55.000 0.00 0.00 46.98 3.33
7194 7519 0.529833 CTGTGGGCACAACACAACAA 59.470 50.000 0.00 0.00 46.98 2.83
7195 7520 0.529833 TGTGGGCACAACACAACAAG 59.470 50.000 0.00 0.00 45.05 3.16
7196 7521 0.805711 GTGGGCACAACACAACAAGC 60.806 55.000 0.00 0.00 38.67 4.01
7197 7522 1.227234 GGGCACAACACAACAAGCC 60.227 57.895 0.00 0.00 41.29 4.35
7198 7523 1.227234 GGCACAACACAACAAGCCC 60.227 57.895 0.00 0.00 36.17 5.19
7199 7524 1.515020 GCACAACACAACAAGCCCA 59.485 52.632 0.00 0.00 0.00 5.36
7200 7525 0.108424 GCACAACACAACAAGCCCAA 60.108 50.000 0.00 0.00 0.00 4.12
7201 7526 1.639280 CACAACACAACAAGCCCAAC 58.361 50.000 0.00 0.00 0.00 3.77
7202 7527 1.067283 CACAACACAACAAGCCCAACA 60.067 47.619 0.00 0.00 0.00 3.33
7203 7528 1.067213 ACAACACAACAAGCCCAACAC 60.067 47.619 0.00 0.00 0.00 3.32
7204 7529 1.067283 CAACACAACAAGCCCAACACA 60.067 47.619 0.00 0.00 0.00 3.72
7205 7530 0.817013 ACACAACAAGCCCAACACAG 59.183 50.000 0.00 0.00 0.00 3.66
7206 7531 0.102844 CACAACAAGCCCAACACAGG 59.897 55.000 0.00 0.00 0.00 4.00
7207 7532 0.033601 ACAACAAGCCCAACACAGGA 60.034 50.000 0.00 0.00 0.00 3.86
7208 7533 1.110442 CAACAAGCCCAACACAGGAA 58.890 50.000 0.00 0.00 0.00 3.36
7209 7534 1.111277 AACAAGCCCAACACAGGAAC 58.889 50.000 0.00 0.00 0.00 3.62
7210 7535 0.033601 ACAAGCCCAACACAGGAACA 60.034 50.000 0.00 0.00 0.00 3.18
7211 7536 0.385390 CAAGCCCAACACAGGAACAC 59.615 55.000 0.00 0.00 0.00 3.32
7212 7537 1.101049 AAGCCCAACACAGGAACACG 61.101 55.000 0.00 0.00 0.00 4.49
7213 7538 1.525077 GCCCAACACAGGAACACGA 60.525 57.895 0.00 0.00 0.00 4.35
7214 7539 1.782028 GCCCAACACAGGAACACGAC 61.782 60.000 0.00 0.00 0.00 4.34
7215 7540 1.495584 CCCAACACAGGAACACGACG 61.496 60.000 0.00 0.00 0.00 5.12
7216 7541 0.528901 CCAACACAGGAACACGACGA 60.529 55.000 0.00 0.00 0.00 4.20
7217 7542 1.282817 CAACACAGGAACACGACGAA 58.717 50.000 0.00 0.00 0.00 3.85
7218 7543 1.661617 CAACACAGGAACACGACGAAA 59.338 47.619 0.00 0.00 0.00 3.46
7219 7544 2.234300 ACACAGGAACACGACGAAAT 57.766 45.000 0.00 0.00 0.00 2.17
7220 7545 3.374220 ACACAGGAACACGACGAAATA 57.626 42.857 0.00 0.00 0.00 1.40
7221 7546 3.719924 ACACAGGAACACGACGAAATAA 58.280 40.909 0.00 0.00 0.00 1.40
7222 7547 3.492011 ACACAGGAACACGACGAAATAAC 59.508 43.478 0.00 0.00 0.00 1.89
7223 7548 3.491639 CACAGGAACACGACGAAATAACA 59.508 43.478 0.00 0.00 0.00 2.41
7224 7549 3.492011 ACAGGAACACGACGAAATAACAC 59.508 43.478 0.00 0.00 0.00 3.32
7225 7550 3.491639 CAGGAACACGACGAAATAACACA 59.508 43.478 0.00 0.00 0.00 3.72
7226 7551 4.151689 CAGGAACACGACGAAATAACACAT 59.848 41.667 0.00 0.00 0.00 3.21
7227 7552 5.346551 CAGGAACACGACGAAATAACACATA 59.653 40.000 0.00 0.00 0.00 2.29
7228 7553 5.927689 AGGAACACGACGAAATAACACATAA 59.072 36.000 0.00 0.00 0.00 1.90
7229 7554 6.424509 AGGAACACGACGAAATAACACATAAA 59.575 34.615 0.00 0.00 0.00 1.40
7230 7555 6.517374 GGAACACGACGAAATAACACATAAAC 59.483 38.462 0.00 0.00 0.00 2.01
7231 7556 5.601582 ACACGACGAAATAACACATAAACG 58.398 37.500 0.00 0.00 0.00 3.60
7232 7557 5.010749 CACGACGAAATAACACATAAACGG 58.989 41.667 0.00 0.00 0.00 4.44
7233 7558 4.017271 CGACGAAATAACACATAAACGGC 58.983 43.478 0.00 0.00 0.00 5.68
7234 7559 4.434461 CGACGAAATAACACATAAACGGCA 60.434 41.667 0.00 0.00 0.00 5.69
7235 7560 4.965062 ACGAAATAACACATAAACGGCAG 58.035 39.130 0.00 0.00 0.00 4.85
7236 7561 4.142773 ACGAAATAACACATAAACGGCAGG 60.143 41.667 0.00 0.00 0.00 4.85
7237 7562 4.668289 GAAATAACACATAAACGGCAGGG 58.332 43.478 0.00 0.00 0.00 4.45
7238 7563 1.455248 TAACACATAAACGGCAGGGC 58.545 50.000 0.00 0.00 0.00 5.19
7239 7564 1.582610 AACACATAAACGGCAGGGCG 61.583 55.000 13.96 13.96 0.00 6.13
7240 7565 2.437716 ACATAAACGGCAGGGCGG 60.438 61.111 19.43 6.07 35.02 6.13
7241 7566 2.437716 CATAAACGGCAGGGCGGT 60.438 61.111 19.43 10.43 43.64 5.68
7242 7567 2.437716 ATAAACGGCAGGGCGGTG 60.438 61.111 19.43 0.00 41.05 4.94
7243 7568 3.987954 ATAAACGGCAGGGCGGTGG 62.988 63.158 19.43 0.00 41.05 4.61
7255 7580 4.812476 CGGTGGCGATGGCGAGAA 62.812 66.667 0.00 0.00 41.24 2.87
7256 7581 2.892425 GGTGGCGATGGCGAGAAG 60.892 66.667 0.00 0.00 41.24 2.85
7257 7582 2.184322 GTGGCGATGGCGAGAAGA 59.816 61.111 0.00 0.00 41.24 2.87
7258 7583 1.227380 GTGGCGATGGCGAGAAGAT 60.227 57.895 0.00 0.00 41.24 2.40
7259 7584 0.032130 GTGGCGATGGCGAGAAGATA 59.968 55.000 0.00 0.00 41.24 1.98
7260 7585 0.750249 TGGCGATGGCGAGAAGATAA 59.250 50.000 0.00 0.00 41.24 1.75
7261 7586 1.140816 GGCGATGGCGAGAAGATAAC 58.859 55.000 0.00 0.00 41.24 1.89
7262 7587 0.778815 GCGATGGCGAGAAGATAACG 59.221 55.000 0.00 0.00 40.82 3.18
7263 7588 1.599667 GCGATGGCGAGAAGATAACGA 60.600 52.381 0.00 0.00 40.82 3.85
7264 7589 2.922758 GCGATGGCGAGAAGATAACGAT 60.923 50.000 0.00 0.00 40.82 3.73
7265 7590 2.911723 CGATGGCGAGAAGATAACGATC 59.088 50.000 0.00 0.00 40.82 3.69
7266 7591 3.365465 CGATGGCGAGAAGATAACGATCT 60.365 47.826 0.00 0.00 41.42 2.75
7267 7592 4.142881 CGATGGCGAGAAGATAACGATCTA 60.143 45.833 0.00 0.00 39.77 1.98
7268 7593 5.617087 CGATGGCGAGAAGATAACGATCTAA 60.617 44.000 0.00 0.00 39.77 2.10
7269 7594 5.707242 TGGCGAGAAGATAACGATCTAAT 57.293 39.130 0.00 0.00 41.87 1.73
7270 7595 5.700846 TGGCGAGAAGATAACGATCTAATC 58.299 41.667 0.00 0.00 41.87 1.75
7271 7596 5.473846 TGGCGAGAAGATAACGATCTAATCT 59.526 40.000 0.00 0.00 41.87 2.40
7272 7597 5.797934 GGCGAGAAGATAACGATCTAATCTG 59.202 44.000 0.00 0.00 41.87 2.90
7273 7598 5.797934 GCGAGAAGATAACGATCTAATCTGG 59.202 44.000 0.00 0.00 41.87 3.86
7274 7599 6.568844 GCGAGAAGATAACGATCTAATCTGGT 60.569 42.308 0.00 0.00 41.87 4.00
7275 7600 7.364200 CGAGAAGATAACGATCTAATCTGGTT 58.636 38.462 0.00 0.00 41.87 3.67
7276 7601 7.535940 CGAGAAGATAACGATCTAATCTGGTTC 59.464 40.741 0.00 0.00 41.87 3.62
7277 7602 7.662897 AGAAGATAACGATCTAATCTGGTTCC 58.337 38.462 0.00 0.00 41.87 3.62
7278 7603 6.015027 AGATAACGATCTAATCTGGTTCCG 57.985 41.667 0.00 0.00 40.85 4.30
7279 7604 3.454371 AACGATCTAATCTGGTTCCGG 57.546 47.619 0.00 0.00 0.00 5.14
7280 7605 2.385803 ACGATCTAATCTGGTTCCGGT 58.614 47.619 0.00 0.00 0.00 5.28
7281 7606 2.100916 ACGATCTAATCTGGTTCCGGTG 59.899 50.000 0.00 0.00 0.00 4.94
7282 7607 2.545952 CGATCTAATCTGGTTCCGGTGG 60.546 54.545 0.00 0.00 0.00 4.61
7283 7608 1.946984 TCTAATCTGGTTCCGGTGGT 58.053 50.000 0.00 0.00 0.00 4.16
7284 7609 1.553248 TCTAATCTGGTTCCGGTGGTG 59.447 52.381 0.00 0.00 0.00 4.17
7285 7610 0.616371 TAATCTGGTTCCGGTGGTGG 59.384 55.000 0.00 0.00 0.00 4.61
7286 7611 1.423794 AATCTGGTTCCGGTGGTGGT 61.424 55.000 0.00 0.00 0.00 4.16
7287 7612 2.124507 ATCTGGTTCCGGTGGTGGTG 62.125 60.000 0.00 0.00 0.00 4.17
7288 7613 3.842925 CTGGTTCCGGTGGTGGTGG 62.843 68.421 0.00 0.00 0.00 4.61
7289 7614 4.653888 GGTTCCGGTGGTGGTGGG 62.654 72.222 0.00 0.00 0.00 4.61
7290 7615 4.653888 GTTCCGGTGGTGGTGGGG 62.654 72.222 0.00 0.00 0.00 4.96
7294 7619 4.344865 CGGTGGTGGTGGGGGAAG 62.345 72.222 0.00 0.00 0.00 3.46
7295 7620 4.678743 GGTGGTGGTGGGGGAAGC 62.679 72.222 0.00 0.00 0.00 3.86
7298 7623 3.728373 GGTGGTGGGGGAAGCGAT 61.728 66.667 0.00 0.00 0.00 4.58
7299 7624 2.438434 GTGGTGGGGGAAGCGATG 60.438 66.667 0.00 0.00 0.00 3.84
7300 7625 3.727258 TGGTGGGGGAAGCGATGG 61.727 66.667 0.00 0.00 0.00 3.51
7301 7626 3.407967 GGTGGGGGAAGCGATGGA 61.408 66.667 0.00 0.00 0.00 3.41
7302 7627 2.190578 GTGGGGGAAGCGATGGAG 59.809 66.667 0.00 0.00 0.00 3.86
7303 7628 3.797353 TGGGGGAAGCGATGGAGC 61.797 66.667 0.00 0.00 37.41 4.70
7304 7629 4.570874 GGGGGAAGCGATGGAGCC 62.571 72.222 0.00 0.00 38.01 4.70
7305 7630 3.797353 GGGGAAGCGATGGAGCCA 61.797 66.667 0.00 0.00 38.01 4.75
7306 7631 2.512896 GGGAAGCGATGGAGCCAT 59.487 61.111 0.71 0.71 39.69 4.40
7307 7632 1.599240 GGGAAGCGATGGAGCCATC 60.599 63.158 17.58 17.58 46.71 3.51
7341 7666 3.302375 CGAAGCTGGGAGATGATGG 57.698 57.895 0.00 0.00 0.00 3.51
7342 7667 0.755079 CGAAGCTGGGAGATGATGGA 59.245 55.000 0.00 0.00 0.00 3.41
7343 7668 1.347050 CGAAGCTGGGAGATGATGGAT 59.653 52.381 0.00 0.00 0.00 3.41
7344 7669 2.780714 GAAGCTGGGAGATGATGGATG 58.219 52.381 0.00 0.00 0.00 3.51
7345 7670 1.817087 AGCTGGGAGATGATGGATGT 58.183 50.000 0.00 0.00 0.00 3.06
7346 7671 1.420514 AGCTGGGAGATGATGGATGTG 59.579 52.381 0.00 0.00 0.00 3.21
7347 7672 1.419012 GCTGGGAGATGATGGATGTGA 59.581 52.381 0.00 0.00 0.00 3.58
7348 7673 2.040012 GCTGGGAGATGATGGATGTGAT 59.960 50.000 0.00 0.00 0.00 3.06
7349 7674 3.676093 CTGGGAGATGATGGATGTGATG 58.324 50.000 0.00 0.00 0.00 3.07
7350 7675 2.374170 TGGGAGATGATGGATGTGATGG 59.626 50.000 0.00 0.00 0.00 3.51
7351 7676 2.434428 GGAGATGATGGATGTGATGGC 58.566 52.381 0.00 0.00 0.00 4.40
7352 7677 2.074576 GAGATGATGGATGTGATGGCG 58.925 52.381 0.00 0.00 0.00 5.69
7353 7678 1.419012 AGATGATGGATGTGATGGCGT 59.581 47.619 0.00 0.00 0.00 5.68
7354 7679 1.802960 GATGATGGATGTGATGGCGTC 59.197 52.381 0.00 0.00 0.00 5.19
7355 7680 0.832626 TGATGGATGTGATGGCGTCT 59.167 50.000 8.40 0.00 0.00 4.18
7356 7681 1.202568 TGATGGATGTGATGGCGTCTC 60.203 52.381 8.40 5.00 0.00 3.36
7357 7682 1.069823 GATGGATGTGATGGCGTCTCT 59.930 52.381 8.40 0.00 0.00 3.10
7358 7683 0.461548 TGGATGTGATGGCGTCTCTC 59.538 55.000 8.40 4.41 0.00 3.20
7359 7684 0.749649 GGATGTGATGGCGTCTCTCT 59.250 55.000 8.40 0.00 0.00 3.10
7360 7685 1.137872 GGATGTGATGGCGTCTCTCTT 59.862 52.381 8.40 0.00 0.00 2.85
7361 7686 2.468831 GATGTGATGGCGTCTCTCTTC 58.531 52.381 8.40 3.51 0.00 2.87
7362 7687 0.532573 TGTGATGGCGTCTCTCTTCC 59.467 55.000 8.40 0.00 0.00 3.46
7363 7688 0.820871 GTGATGGCGTCTCTCTTCCT 59.179 55.000 8.40 0.00 0.00 3.36
7364 7689 0.820226 TGATGGCGTCTCTCTTCCTG 59.180 55.000 8.40 0.00 0.00 3.86
7365 7690 0.103937 GATGGCGTCTCTCTTCCTGG 59.896 60.000 0.00 0.00 0.00 4.45
7366 7691 1.333636 ATGGCGTCTCTCTTCCTGGG 61.334 60.000 0.00 0.00 0.00 4.45
7367 7692 2.726351 GGCGTCTCTCTTCCTGGGG 61.726 68.421 0.00 0.00 0.00 4.96
7368 7693 2.896443 CGTCTCTCTTCCTGGGGC 59.104 66.667 0.00 0.00 0.00 5.80
7369 7694 2.896443 GTCTCTCTTCCTGGGGCG 59.104 66.667 0.00 0.00 0.00 6.13
7370 7695 2.364317 TCTCTCTTCCTGGGGCGG 60.364 66.667 0.00 0.00 0.00 6.13
7371 7696 4.168291 CTCTCTTCCTGGGGCGGC 62.168 72.222 0.00 0.00 0.00 6.53
7372 7697 4.722535 TCTCTTCCTGGGGCGGCT 62.723 66.667 9.56 0.00 0.00 5.52
7373 7698 2.764128 CTCTTCCTGGGGCGGCTA 60.764 66.667 9.56 0.00 0.00 3.93
7374 7699 2.285069 TCTTCCTGGGGCGGCTAA 60.285 61.111 9.56 0.00 0.00 3.09
7375 7700 2.190578 CTTCCTGGGGCGGCTAAG 59.809 66.667 9.56 6.71 0.00 2.18
7376 7701 4.109675 TTCCTGGGGCGGCTAAGC 62.110 66.667 9.56 0.00 0.00 3.09
7387 7712 4.179579 GCTAAGCGGCCGCCAAAG 62.180 66.667 44.47 35.89 43.17 2.77
7388 7713 4.179579 CTAAGCGGCCGCCAAAGC 62.180 66.667 44.47 18.77 43.17 3.51
7389 7714 4.715523 TAAGCGGCCGCCAAAGCT 62.716 61.111 44.47 24.50 43.17 3.74
7396 7721 3.667087 CCGCCAAAGCTGCAAGTA 58.333 55.556 1.02 0.00 36.60 2.24
7397 7722 1.956043 CCGCCAAAGCTGCAAGTAA 59.044 52.632 1.02 0.00 36.60 2.24
7398 7723 0.387239 CCGCCAAAGCTGCAAGTAAC 60.387 55.000 1.02 0.00 36.60 2.50
7399 7724 0.387239 CGCCAAAGCTGCAAGTAACC 60.387 55.000 1.02 0.00 36.60 2.85
7400 7725 0.673437 GCCAAAGCTGCAAGTAACCA 59.327 50.000 1.02 0.00 35.30 3.67
7401 7726 1.336240 GCCAAAGCTGCAAGTAACCAG 60.336 52.381 1.02 0.00 35.30 4.00
7402 7727 2.229792 CCAAAGCTGCAAGTAACCAGA 58.770 47.619 1.02 0.00 35.30 3.86
7403 7728 2.030805 CCAAAGCTGCAAGTAACCAGAC 60.031 50.000 1.02 0.00 35.30 3.51
7404 7729 1.897560 AAGCTGCAAGTAACCAGACC 58.102 50.000 1.02 0.00 35.30 3.85
7405 7730 0.764890 AGCTGCAAGTAACCAGACCA 59.235 50.000 1.02 0.00 35.30 4.02
7406 7731 1.352352 AGCTGCAAGTAACCAGACCAT 59.648 47.619 1.02 0.00 35.30 3.55
7407 7732 2.162681 GCTGCAAGTAACCAGACCATT 58.837 47.619 0.00 0.00 35.30 3.16
7408 7733 2.558359 GCTGCAAGTAACCAGACCATTT 59.442 45.455 0.00 0.00 35.30 2.32
7409 7734 3.612479 GCTGCAAGTAACCAGACCATTTG 60.612 47.826 0.00 0.00 35.30 2.32
7410 7735 3.820467 CTGCAAGTAACCAGACCATTTGA 59.180 43.478 0.00 0.00 0.00 2.69
7411 7736 4.211125 TGCAAGTAACCAGACCATTTGAA 58.789 39.130 0.00 0.00 0.00 2.69
7412 7737 4.037446 TGCAAGTAACCAGACCATTTGAAC 59.963 41.667 0.00 0.00 0.00 3.18
7413 7738 4.037446 GCAAGTAACCAGACCATTTGAACA 59.963 41.667 0.00 0.00 0.00 3.18
7414 7739 5.451242 GCAAGTAACCAGACCATTTGAACAA 60.451 40.000 0.00 0.00 0.00 2.83
7415 7740 6.568869 CAAGTAACCAGACCATTTGAACAAA 58.431 36.000 2.48 2.48 34.46 2.83
7416 7741 6.391227 AGTAACCAGACCATTTGAACAAAG 57.609 37.500 6.18 0.00 33.32 2.77
7417 7742 3.733443 ACCAGACCATTTGAACAAAGC 57.267 42.857 6.18 0.00 33.32 3.51
7418 7743 2.034558 ACCAGACCATTTGAACAAAGCG 59.965 45.455 6.18 1.65 33.32 4.68
7419 7744 2.034558 CCAGACCATTTGAACAAAGCGT 59.965 45.455 6.18 4.44 33.32 5.07
7420 7745 3.300009 CAGACCATTTGAACAAAGCGTC 58.700 45.455 15.44 15.44 34.81 5.19
7421 7746 2.948979 AGACCATTTGAACAAAGCGTCA 59.051 40.909 20.75 0.00 35.98 4.35
7422 7747 3.003689 AGACCATTTGAACAAAGCGTCAG 59.996 43.478 20.75 6.15 35.98 3.51
7423 7748 2.687935 ACCATTTGAACAAAGCGTCAGT 59.312 40.909 6.18 0.00 33.32 3.41
7424 7749 3.880490 ACCATTTGAACAAAGCGTCAGTA 59.120 39.130 6.18 0.00 33.32 2.74
7425 7750 4.024048 ACCATTTGAACAAAGCGTCAGTAG 60.024 41.667 6.18 0.00 33.32 2.57
7426 7751 3.602390 TTTGAACAAAGCGTCAGTAGC 57.398 42.857 0.00 0.00 0.00 3.58
7427 7752 2.232756 TGAACAAAGCGTCAGTAGCA 57.767 45.000 0.00 0.00 37.01 3.49
7428 7753 2.766313 TGAACAAAGCGTCAGTAGCAT 58.234 42.857 0.00 0.00 37.01 3.79
7429 7754 2.480037 TGAACAAAGCGTCAGTAGCATG 59.520 45.455 0.00 0.00 37.01 4.06
7430 7755 2.455674 ACAAAGCGTCAGTAGCATGA 57.544 45.000 0.00 0.00 37.01 3.07
7431 7756 2.069273 ACAAAGCGTCAGTAGCATGAC 58.931 47.619 0.00 6.65 45.01 3.06
7440 7765 4.890158 TCAGTAGCATGACAAAGAGGAA 57.110 40.909 0.00 0.00 0.00 3.36
7441 7766 5.426689 TCAGTAGCATGACAAAGAGGAAT 57.573 39.130 0.00 0.00 0.00 3.01
7442 7767 5.181009 TCAGTAGCATGACAAAGAGGAATG 58.819 41.667 0.00 0.00 0.00 2.67
7443 7768 3.944015 AGTAGCATGACAAAGAGGAATGC 59.056 43.478 0.00 0.00 43.10 3.56
7444 7769 1.741706 AGCATGACAAAGAGGAATGCG 59.258 47.619 0.00 0.00 46.40 4.73
7445 7770 1.796617 GCATGACAAAGAGGAATGCGC 60.797 52.381 0.00 0.00 34.84 6.09
7446 7771 1.741706 CATGACAAAGAGGAATGCGCT 59.258 47.619 9.73 0.00 0.00 5.92
7447 7772 1.159285 TGACAAAGAGGAATGCGCTG 58.841 50.000 9.73 0.00 0.00 5.18
7448 7773 1.270785 TGACAAAGAGGAATGCGCTGA 60.271 47.619 9.73 0.00 0.00 4.26
7449 7774 1.806542 GACAAAGAGGAATGCGCTGAA 59.193 47.619 9.73 0.00 0.00 3.02
7450 7775 2.421424 GACAAAGAGGAATGCGCTGAAT 59.579 45.455 9.73 0.00 0.00 2.57
7451 7776 2.421424 ACAAAGAGGAATGCGCTGAATC 59.579 45.455 9.73 1.07 0.00 2.52
7452 7777 2.408271 AAGAGGAATGCGCTGAATCA 57.592 45.000 9.73 0.00 0.00 2.57
7453 7778 1.661341 AGAGGAATGCGCTGAATCAC 58.339 50.000 9.73 0.58 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 3.679980 GCGCTGACTCAAATTCAGAACTA 59.320 43.478 0.00 0.00 42.81 2.24
27 28 1.229975 CCAACACATGCGCTGACTCA 61.230 55.000 9.73 0.00 0.00 3.41
39 40 0.468226 AAAGCCGACTCTCCAACACA 59.532 50.000 0.00 0.00 0.00 3.72
40 41 0.868406 CAAAGCCGACTCTCCAACAC 59.132 55.000 0.00 0.00 0.00 3.32
53 54 7.011828 TGTAAAGAATTCGTATAGCAAAGCC 57.988 36.000 0.00 0.00 0.00 4.35
96 97 0.986992 GACGGACACGGATAACAACG 59.013 55.000 0.00 0.00 46.48 4.10
213 214 1.398451 GCAACGTGGTCGAATGTGAAG 60.398 52.381 0.00 0.00 40.62 3.02
222 223 1.151777 ACTCACAAGCAACGTGGTCG 61.152 55.000 0.00 0.00 43.34 4.79
273 274 3.944015 AGGATTAGCACAAGAGCATGAAC 59.056 43.478 0.00 0.00 36.85 3.18
300 360 6.310467 CCTGCAAATTCAAGATTTGATCACAG 59.690 38.462 13.88 10.82 40.42 3.66
336 403 4.250464 CCATTCGTAAACCAGCAACTAGA 58.750 43.478 0.00 0.00 0.00 2.43
338 405 3.749088 CACCATTCGTAAACCAGCAACTA 59.251 43.478 0.00 0.00 0.00 2.24
353 420 2.945668 GCCATACAGTTCTCCACCATTC 59.054 50.000 0.00 0.00 0.00 2.67
360 427 3.388024 TGTATCCAGCCATACAGTTCTCC 59.612 47.826 0.00 0.00 34.85 3.71
475 549 2.624838 CCATCCAGTCTGCAAACAACTT 59.375 45.455 0.00 0.00 0.00 2.66
491 566 1.351017 TGTGTCTTCCCACTTCCATCC 59.649 52.381 0.00 0.00 36.30 3.51
492 567 2.224523 TGTGTGTCTTCCCACTTCCATC 60.225 50.000 0.00 0.00 36.30 3.51
493 568 1.774254 TGTGTGTCTTCCCACTTCCAT 59.226 47.619 0.00 0.00 36.30 3.41
494 569 1.134220 GTGTGTGTCTTCCCACTTCCA 60.134 52.381 0.00 0.00 36.30 3.53
660 735 6.881065 AGCAGTATAAGACACATCACAATGTT 59.119 34.615 0.00 0.00 43.74 2.71
693 768 6.375174 TCAGGATTCACACATAACAGATTTGG 59.625 38.462 0.00 0.00 0.00 3.28
1018 1114 8.463930 TTGCAAGAAGAAGAAAATCCTAGAAA 57.536 30.769 0.00 0.00 0.00 2.52
1260 1373 9.851686 ATAAATTGTGAGGCAAGTGAGAATATA 57.148 29.630 0.00 0.00 40.86 0.86
1331 1444 0.396435 ACCAGATGACGTTTGCCTGA 59.604 50.000 8.94 0.00 0.00 3.86
1669 1787 3.686726 GCAAAGGGAGTAGAATGACACTG 59.313 47.826 0.00 0.00 0.00 3.66
1812 1937 5.180117 ACACACAAGAAGTTGTATGAGCATC 59.820 40.000 3.66 0.00 42.73 3.91
2274 2403 2.851263 TGGTAAATTGAGACCGCAGT 57.149 45.000 1.26 0.00 38.69 4.40
2372 2501 9.362539 CAATTATTTCTGACTTCAATTCAAGGG 57.637 33.333 0.00 0.00 0.00 3.95
2783 2917 7.609760 TGTCAGTATGTTGCATAACCTAAAG 57.390 36.000 0.00 0.00 37.40 1.85
2784 2918 8.458052 CAATGTCAGTATGTTGCATAACCTAAA 58.542 33.333 0.00 0.00 37.40 1.85
2785 2919 7.415095 GCAATGTCAGTATGTTGCATAACCTAA 60.415 37.037 4.26 0.00 44.63 2.69
2795 2929 5.585844 TGTATGAGGCAATGTCAGTATGTTG 59.414 40.000 0.00 0.00 37.40 3.33
2796 2930 5.744171 TGTATGAGGCAATGTCAGTATGTT 58.256 37.500 0.00 0.00 37.40 2.71
3028 3163 5.011586 TCAAATTCCATCATGTCTTGCAGA 58.988 37.500 0.00 0.00 0.00 4.26
3049 3184 2.805194 TGCATTGATCCAACCACATCA 58.195 42.857 0.00 0.00 0.00 3.07
3101 3236 7.386299 ACAATTTATCCTCGAATACATGCTCTC 59.614 37.037 0.00 0.00 0.00 3.20
3153 3288 9.405587 GAAAACAAGAAATAATGATCGACCAAA 57.594 29.630 0.00 0.00 0.00 3.28
3201 3336 5.728471 CCTCTGAGAGCTCAAATTCAAGTA 58.272 41.667 17.77 0.00 39.39 2.24
3377 3542 5.105063 GGCTAAAAGAATTGATGCCTCAAC 58.895 41.667 6.57 0.00 43.92 3.18
3692 3858 1.594331 ACAAACTCAAGGTTCTCCGC 58.406 50.000 0.00 0.00 37.12 5.54
3714 3880 7.567458 TGACTTCATCCATTCAATATCAGACA 58.433 34.615 0.00 0.00 0.00 3.41
4028 4194 4.724399 TCTTGTTCCTTCTTGGCAATACA 58.276 39.130 0.00 0.00 35.26 2.29
4036 4202 4.336433 TCAGTTGCTTCTTGTTCCTTCTTG 59.664 41.667 0.00 0.00 0.00 3.02
4285 4451 3.126000 GCAGACTCACAACCTTAAGCATC 59.874 47.826 0.00 0.00 0.00 3.91
4292 4458 1.131638 TCAGGCAGACTCACAACCTT 58.868 50.000 0.00 0.00 0.00 3.50
4315 4481 3.780804 TTTGCAGGTATACCACTGTGT 57.219 42.857 23.87 0.00 38.89 3.72
4316 4482 4.260985 TCATTTGCAGGTATACCACTGTG 58.739 43.478 23.87 13.80 38.89 3.66
4826 4995 7.442062 AGCATTTTCAATTGAAATTCCGAGTTT 59.558 29.630 29.13 9.70 42.83 2.66
4911 5080 3.259123 AGAAACCAAATCAACCATCCTGC 59.741 43.478 0.00 0.00 0.00 4.85
4912 5081 6.588719 TTAGAAACCAAATCAACCATCCTG 57.411 37.500 0.00 0.00 0.00 3.86
5023 5192 4.665451 TGGACAACTTCATCATCATGGTT 58.335 39.130 0.00 0.00 0.00 3.67
5162 5331 4.541705 ACAGATGCTGACTCCTGTAGTAT 58.458 43.478 0.82 0.00 39.07 2.12
5210 5379 0.318955 ATTGCTTCAGCCAACGCAAC 60.319 50.000 2.52 0.00 44.07 4.17
5214 5383 4.484236 TGATTTAATTGCTTCAGCCAACG 58.516 39.130 0.00 0.00 41.18 4.10
5244 5413 5.645067 TCATGTGATTTAGAAGCAACCTCAG 59.355 40.000 0.00 0.00 0.00 3.35
5296 5465 4.194640 TCATGATTTGAGCTTCTAGTGGC 58.805 43.478 0.00 0.00 0.00 5.01
5551 5720 3.985925 GCTTGGAGAAGTCATTTTGCAAG 59.014 43.478 0.00 7.95 40.55 4.01
5579 5748 6.206048 TGAGAGTCACAGTATTGTTTCTCGTA 59.794 38.462 14.32 6.99 38.40 3.43
5712 5904 9.541884 ACACAAGGGTTATACAAGGAAATTAAT 57.458 29.630 0.00 0.00 0.00 1.40
5720 5912 6.235664 AGTACAACACAAGGGTTATACAAGG 58.764 40.000 6.43 0.00 34.04 3.61
5735 5927 5.035443 CCGCTATCTGTAGAAGTACAACAC 58.965 45.833 0.00 0.00 38.73 3.32
5834 6026 3.531934 TCTCCACAGCACATACATCAG 57.468 47.619 0.00 0.00 0.00 2.90
5848 6040 0.321122 CAGCTCACCAGGTTCTCCAC 60.321 60.000 0.00 0.00 35.89 4.02
6159 6458 3.569701 TGCAGGAGAAAGTTAAGGCAAAG 59.430 43.478 0.00 0.00 0.00 2.77
6207 6506 3.427638 CCTGCTGCTCATCAAGTTCATTG 60.428 47.826 0.00 0.00 40.52 2.82
6355 6654 8.647143 TGCTTTCTTTTCAGTTTTTCCATAAG 57.353 30.769 0.00 0.00 0.00 1.73
6422 6721 4.052159 CTGTTGACCCAGCTATAGTCTG 57.948 50.000 13.93 13.93 0.00 3.51
6432 6731 1.604593 CCCCAAGCTGTTGACCCAG 60.605 63.158 0.00 0.00 35.46 4.45
6433 6732 1.063070 TACCCCAAGCTGTTGACCCA 61.063 55.000 0.00 0.00 35.46 4.51
6434 6733 0.322546 CTACCCCAAGCTGTTGACCC 60.323 60.000 0.00 0.00 35.46 4.46
6435 6734 0.960861 GCTACCCCAAGCTGTTGACC 60.961 60.000 0.00 0.00 39.50 4.02
6436 6735 2.556286 GCTACCCCAAGCTGTTGAC 58.444 57.895 0.00 0.00 39.50 3.18
6443 6742 2.137177 TTGACCCAGCTACCCCAAGC 62.137 60.000 0.00 0.00 43.11 4.01
6444 6743 0.404040 TTTGACCCAGCTACCCCAAG 59.596 55.000 0.00 0.00 0.00 3.61
6445 6744 0.854218 TTTTGACCCAGCTACCCCAA 59.146 50.000 0.00 0.00 0.00 4.12
6446 6745 1.005450 GATTTTGACCCAGCTACCCCA 59.995 52.381 0.00 0.00 0.00 4.96
6447 6746 1.005450 TGATTTTGACCCAGCTACCCC 59.995 52.381 0.00 0.00 0.00 4.95
6448 6747 2.369394 CTGATTTTGACCCAGCTACCC 58.631 52.381 0.00 0.00 0.00 3.69
6449 6748 2.026262 TCCTGATTTTGACCCAGCTACC 60.026 50.000 0.00 0.00 0.00 3.18
6450 6749 3.010420 GTCCTGATTTTGACCCAGCTAC 58.990 50.000 0.00 0.00 0.00 3.58
6593 6918 9.814899 CCCAACATTGCATTATATTTAACTCAA 57.185 29.630 0.00 0.00 0.00 3.02
6595 6920 9.816354 AACCCAACATTGCATTATATTTAACTC 57.184 29.630 0.00 0.00 0.00 3.01
6598 6923 9.737427 CGTAACCCAACATTGCATTATATTTAA 57.263 29.630 0.00 0.00 0.00 1.52
6600 6925 7.068839 TCCGTAACCCAACATTGCATTATATTT 59.931 33.333 0.00 0.00 0.00 1.40
6603 6928 5.437946 TCCGTAACCCAACATTGCATTATA 58.562 37.500 0.00 0.00 0.00 0.98
6613 6938 4.888239 TCTTTCATTTTCCGTAACCCAACA 59.112 37.500 0.00 0.00 0.00 3.33
6662 6987 7.212976 TGTCTCTGCACTGGAGATATTAAATC 58.787 38.462 7.35 0.00 41.13 2.17
6690 7015 3.065233 TGAAGCGCATAAAGCATGGTAAG 59.935 43.478 11.47 0.00 46.13 2.34
6816 7141 3.918591 GCATTGCTGTCAAATTCAGTGAG 59.081 43.478 0.16 0.00 35.56 3.51
6867 7192 1.562783 AGTAGGACTTGACCTGGAGC 58.437 55.000 0.00 0.00 40.81 4.70
7025 7350 3.982576 ATTTATAAAGCGGGGCGAAAG 57.017 42.857 3.94 0.00 0.00 2.62
7026 7351 5.823353 CTTTATTTATAAAGCGGGGCGAAA 58.177 37.500 8.78 0.00 41.69 3.46
7027 7352 5.427036 CTTTATTTATAAAGCGGGGCGAA 57.573 39.130 8.78 0.00 41.69 4.70
7037 7362 7.600752 GTGCTTGGTGGTTGCTTTATTTATAAA 59.399 33.333 0.00 0.00 0.00 1.40
7038 7363 7.093992 GTGCTTGGTGGTTGCTTTATTTATAA 58.906 34.615 0.00 0.00 0.00 0.98
7039 7364 6.209589 TGTGCTTGGTGGTTGCTTTATTTATA 59.790 34.615 0.00 0.00 0.00 0.98
7040 7365 5.011533 TGTGCTTGGTGGTTGCTTTATTTAT 59.988 36.000 0.00 0.00 0.00 1.40
7041 7366 4.342378 TGTGCTTGGTGGTTGCTTTATTTA 59.658 37.500 0.00 0.00 0.00 1.40
7042 7367 3.133721 TGTGCTTGGTGGTTGCTTTATTT 59.866 39.130 0.00 0.00 0.00 1.40
7043 7368 2.697751 TGTGCTTGGTGGTTGCTTTATT 59.302 40.909 0.00 0.00 0.00 1.40
7044 7369 2.315176 TGTGCTTGGTGGTTGCTTTAT 58.685 42.857 0.00 0.00 0.00 1.40
7045 7370 1.769026 TGTGCTTGGTGGTTGCTTTA 58.231 45.000 0.00 0.00 0.00 1.85
7046 7371 0.901124 TTGTGCTTGGTGGTTGCTTT 59.099 45.000 0.00 0.00 0.00 3.51
7047 7372 0.901124 TTTGTGCTTGGTGGTTGCTT 59.099 45.000 0.00 0.00 0.00 3.91
7048 7373 0.461135 CTTTGTGCTTGGTGGTTGCT 59.539 50.000 0.00 0.00 0.00 3.91
7049 7374 0.175531 ACTTTGTGCTTGGTGGTTGC 59.824 50.000 0.00 0.00 0.00 4.17
7050 7375 2.223711 GGTACTTTGTGCTTGGTGGTTG 60.224 50.000 0.00 0.00 0.00 3.77
7051 7376 2.028876 GGTACTTTGTGCTTGGTGGTT 58.971 47.619 0.00 0.00 0.00 3.67
7052 7377 1.064314 TGGTACTTTGTGCTTGGTGGT 60.064 47.619 0.00 0.00 0.00 4.16
7053 7378 1.686355 TGGTACTTTGTGCTTGGTGG 58.314 50.000 0.00 0.00 0.00 4.61
7054 7379 2.034558 CCTTGGTACTTTGTGCTTGGTG 59.965 50.000 0.00 0.00 0.00 4.17
7055 7380 2.306847 CCTTGGTACTTTGTGCTTGGT 58.693 47.619 0.00 0.00 0.00 3.67
7056 7381 2.293399 GACCTTGGTACTTTGTGCTTGG 59.707 50.000 0.00 0.00 0.00 3.61
7057 7382 2.948979 TGACCTTGGTACTTTGTGCTTG 59.051 45.455 0.00 0.00 0.00 4.01
7058 7383 2.949644 GTGACCTTGGTACTTTGTGCTT 59.050 45.455 0.00 0.00 0.00 3.91
7059 7384 2.092646 TGTGACCTTGGTACTTTGTGCT 60.093 45.455 0.00 0.00 0.00 4.40
7060 7385 2.294074 TGTGACCTTGGTACTTTGTGC 58.706 47.619 0.00 0.00 0.00 4.57
7061 7386 3.692101 TGTTGTGACCTTGGTACTTTGTG 59.308 43.478 0.00 0.00 0.00 3.33
7062 7387 3.958018 TGTTGTGACCTTGGTACTTTGT 58.042 40.909 0.00 0.00 0.00 2.83
7063 7388 4.974368 TTGTTGTGACCTTGGTACTTTG 57.026 40.909 0.00 0.00 0.00 2.77
7064 7389 5.620429 CGTTTTGTTGTGACCTTGGTACTTT 60.620 40.000 0.00 0.00 0.00 2.66
7065 7390 4.142556 CGTTTTGTTGTGACCTTGGTACTT 60.143 41.667 0.00 0.00 0.00 2.24
7066 7391 3.375922 CGTTTTGTTGTGACCTTGGTACT 59.624 43.478 0.00 0.00 0.00 2.73
7067 7392 3.687200 CGTTTTGTTGTGACCTTGGTAC 58.313 45.455 0.00 0.00 0.00 3.34
7068 7393 2.097791 GCGTTTTGTTGTGACCTTGGTA 59.902 45.455 0.00 0.00 0.00 3.25
7069 7394 1.135228 GCGTTTTGTTGTGACCTTGGT 60.135 47.619 0.00 0.00 0.00 3.67
7070 7395 1.135257 TGCGTTTTGTTGTGACCTTGG 60.135 47.619 0.00 0.00 0.00 3.61
7071 7396 1.917303 GTGCGTTTTGTTGTGACCTTG 59.083 47.619 0.00 0.00 0.00 3.61
7072 7397 1.135228 GGTGCGTTTTGTTGTGACCTT 60.135 47.619 0.00 0.00 0.00 3.50
7073 7398 0.454196 GGTGCGTTTTGTTGTGACCT 59.546 50.000 0.00 0.00 0.00 3.85
7074 7399 0.171455 TGGTGCGTTTTGTTGTGACC 59.829 50.000 0.00 0.00 0.00 4.02
7075 7400 1.264672 GTGGTGCGTTTTGTTGTGAC 58.735 50.000 0.00 0.00 0.00 3.67
7076 7401 0.881796 TGTGGTGCGTTTTGTTGTGA 59.118 45.000 0.00 0.00 0.00 3.58
7077 7402 0.988439 GTGTGGTGCGTTTTGTTGTG 59.012 50.000 0.00 0.00 0.00 3.33
7078 7403 0.598562 TGTGTGGTGCGTTTTGTTGT 59.401 45.000 0.00 0.00 0.00 3.32
7079 7404 0.988439 GTGTGTGGTGCGTTTTGTTG 59.012 50.000 0.00 0.00 0.00 3.33
7080 7405 0.455295 CGTGTGTGGTGCGTTTTGTT 60.455 50.000 0.00 0.00 0.00 2.83
7081 7406 1.135731 CGTGTGTGGTGCGTTTTGT 59.864 52.632 0.00 0.00 0.00 2.83
7082 7407 2.220887 GCGTGTGTGGTGCGTTTTG 61.221 57.895 0.00 0.00 0.00 2.44
7083 7408 2.101380 GCGTGTGTGGTGCGTTTT 59.899 55.556 0.00 0.00 0.00 2.43
7084 7409 3.128188 TGCGTGTGTGGTGCGTTT 61.128 55.556 0.00 0.00 0.00 3.60
7085 7410 3.871574 GTGCGTGTGTGGTGCGTT 61.872 61.111 0.00 0.00 0.00 4.84
7087 7412 4.589700 GTGTGCGTGTGTGGTGCG 62.590 66.667 0.00 0.00 0.00 5.34
7088 7413 2.534856 TTTGTGTGCGTGTGTGGTGC 62.535 55.000 0.00 0.00 0.00 5.01
7089 7414 0.523125 CTTTGTGTGCGTGTGTGGTG 60.523 55.000 0.00 0.00 0.00 4.17
7090 7415 1.800032 CTTTGTGTGCGTGTGTGGT 59.200 52.632 0.00 0.00 0.00 4.16
7091 7416 1.586042 GCTTTGTGTGCGTGTGTGG 60.586 57.895 0.00 0.00 0.00 4.17
7092 7417 1.586042 GGCTTTGTGTGCGTGTGTG 60.586 57.895 0.00 0.00 0.00 3.82
7093 7418 2.043405 TGGCTTTGTGTGCGTGTGT 61.043 52.632 0.00 0.00 0.00 3.72
7094 7419 1.586042 GTGGCTTTGTGTGCGTGTG 60.586 57.895 0.00 0.00 0.00 3.82
7095 7420 2.770589 GGTGGCTTTGTGTGCGTGT 61.771 57.895 0.00 0.00 0.00 4.49
7096 7421 2.026014 GGTGGCTTTGTGTGCGTG 59.974 61.111 0.00 0.00 0.00 5.34
7097 7422 3.582120 CGGTGGCTTTGTGTGCGT 61.582 61.111 0.00 0.00 0.00 5.24
7098 7423 4.980903 GCGGTGGCTTTGTGTGCG 62.981 66.667 0.00 0.00 35.83 5.34
7099 7424 4.980903 CGCGGTGGCTTTGTGTGC 62.981 66.667 0.00 0.00 36.88 4.57
7100 7425 4.326766 CCGCGGTGGCTTTGTGTG 62.327 66.667 19.50 0.00 36.88 3.82
7116 7441 4.572571 TGTGTGTTGGACCGGGCC 62.573 66.667 23.70 23.70 0.00 5.80
7117 7442 3.284449 GTGTGTGTTGGACCGGGC 61.284 66.667 6.32 0.21 0.00 6.13
7118 7443 2.184167 GTGTGTGTGTTGGACCGGG 61.184 63.158 6.32 0.00 0.00 5.73
7119 7444 1.450491 TGTGTGTGTGTTGGACCGG 60.450 57.895 0.00 0.00 0.00 5.28
7120 7445 1.021920 TGTGTGTGTGTGTTGGACCG 61.022 55.000 0.00 0.00 0.00 4.79
7121 7446 0.450184 GTGTGTGTGTGTGTTGGACC 59.550 55.000 0.00 0.00 0.00 4.46
7122 7447 1.135803 GTGTGTGTGTGTGTGTTGGAC 60.136 52.381 0.00 0.00 0.00 4.02
7123 7448 1.160989 GTGTGTGTGTGTGTGTTGGA 58.839 50.000 0.00 0.00 0.00 3.53
7124 7449 0.877743 TGTGTGTGTGTGTGTGTTGG 59.122 50.000 0.00 0.00 0.00 3.77
7125 7450 1.265365 TGTGTGTGTGTGTGTGTGTTG 59.735 47.619 0.00 0.00 0.00 3.33
7126 7451 1.265635 GTGTGTGTGTGTGTGTGTGTT 59.734 47.619 0.00 0.00 0.00 3.32
7127 7452 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
7128 7453 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
7129 7454 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
7130 7455 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
7131 7456 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
7132 7457 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
7133 7458 1.155889 CTGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
7134 7459 1.394572 CTCTGTGTGTGTGTGTGTGTG 59.605 52.381 0.00 0.00 0.00 3.82
7135 7460 1.275010 TCTCTGTGTGTGTGTGTGTGT 59.725 47.619 0.00 0.00 0.00 3.72
7136 7461 1.660607 GTCTCTGTGTGTGTGTGTGTG 59.339 52.381 0.00 0.00 0.00 3.82
7137 7462 1.405526 GGTCTCTGTGTGTGTGTGTGT 60.406 52.381 0.00 0.00 0.00 3.72
7138 7463 1.290203 GGTCTCTGTGTGTGTGTGTG 58.710 55.000 0.00 0.00 0.00 3.82
7139 7464 0.901827 TGGTCTCTGTGTGTGTGTGT 59.098 50.000 0.00 0.00 0.00 3.72
7140 7465 1.665679 GTTGGTCTCTGTGTGTGTGTG 59.334 52.381 0.00 0.00 0.00 3.82
7141 7466 1.277842 TGTTGGTCTCTGTGTGTGTGT 59.722 47.619 0.00 0.00 0.00 3.72
7142 7467 1.935873 CTGTTGGTCTCTGTGTGTGTG 59.064 52.381 0.00 0.00 0.00 3.82
7143 7468 1.831106 TCTGTTGGTCTCTGTGTGTGT 59.169 47.619 0.00 0.00 0.00 3.72
7144 7469 2.205074 GTCTGTTGGTCTCTGTGTGTG 58.795 52.381 0.00 0.00 0.00 3.82
7145 7470 1.139058 GGTCTGTTGGTCTCTGTGTGT 59.861 52.381 0.00 0.00 0.00 3.72
7146 7471 1.414181 AGGTCTGTTGGTCTCTGTGTG 59.586 52.381 0.00 0.00 0.00 3.82
7147 7472 1.794714 AGGTCTGTTGGTCTCTGTGT 58.205 50.000 0.00 0.00 0.00 3.72
7148 7473 3.322254 ACTTAGGTCTGTTGGTCTCTGTG 59.678 47.826 0.00 0.00 0.00 3.66
7149 7474 3.574826 GACTTAGGTCTGTTGGTCTCTGT 59.425 47.826 0.00 0.00 39.24 3.41
7150 7475 3.056465 GGACTTAGGTCTGTTGGTCTCTG 60.056 52.174 4.85 0.00 41.82 3.35
7151 7476 3.166679 GGACTTAGGTCTGTTGGTCTCT 58.833 50.000 4.85 0.00 41.82 3.10
7152 7477 2.897969 TGGACTTAGGTCTGTTGGTCTC 59.102 50.000 4.85 0.00 41.82 3.36
7153 7478 2.900546 CTGGACTTAGGTCTGTTGGTCT 59.099 50.000 4.85 0.00 41.82 3.85
7154 7479 2.613223 GCTGGACTTAGGTCTGTTGGTC 60.613 54.545 4.85 0.00 41.82 4.02
7155 7480 1.348036 GCTGGACTTAGGTCTGTTGGT 59.652 52.381 4.85 0.00 41.82 3.67
7156 7481 1.625818 AGCTGGACTTAGGTCTGTTGG 59.374 52.381 4.85 0.00 41.82 3.77
7157 7482 2.037772 ACAGCTGGACTTAGGTCTGTTG 59.962 50.000 19.93 8.82 41.82 3.33
7158 7483 2.037772 CACAGCTGGACTTAGGTCTGTT 59.962 50.000 19.93 0.00 41.82 3.16
7159 7484 1.620819 CACAGCTGGACTTAGGTCTGT 59.379 52.381 19.93 0.00 41.82 3.41
7160 7485 1.066573 CCACAGCTGGACTTAGGTCTG 60.067 57.143 19.93 2.54 40.55 3.51
7161 7486 1.270907 CCACAGCTGGACTTAGGTCT 58.729 55.000 19.93 0.00 40.55 3.85
7162 7487 0.250513 CCCACAGCTGGACTTAGGTC 59.749 60.000 19.93 0.00 40.55 3.85
7163 7488 1.842381 GCCCACAGCTGGACTTAGGT 61.842 60.000 19.93 0.00 40.55 3.08
7164 7489 1.078143 GCCCACAGCTGGACTTAGG 60.078 63.158 19.93 9.83 40.55 2.69
7165 7490 0.674895 GTGCCCACAGCTGGACTTAG 60.675 60.000 19.93 1.37 44.23 2.18
7166 7491 1.374947 GTGCCCACAGCTGGACTTA 59.625 57.895 19.93 0.00 44.23 2.24
7167 7492 2.113986 GTGCCCACAGCTGGACTT 59.886 61.111 19.93 0.00 44.23 3.01
7168 7493 2.756042 TTGTGCCCACAGCTGGACT 61.756 57.895 19.93 0.00 42.94 3.85
7169 7494 2.203337 TTGTGCCCACAGCTGGAC 60.203 61.111 19.93 2.19 42.94 4.02
7170 7495 2.203337 GTTGTGCCCACAGCTGGA 60.203 61.111 19.93 0.00 42.94 3.86
7171 7496 2.519063 TGTTGTGCCCACAGCTGG 60.519 61.111 19.93 6.95 42.94 4.85
7172 7497 1.665264 TTGTGTTGTGCCCACAGCTG 61.665 55.000 13.48 13.48 43.19 4.24
7173 7498 1.379710 TTGTGTTGTGCCCACAGCT 60.380 52.632 14.73 0.00 43.19 4.24
7174 7499 1.226945 GTTGTGTTGTGCCCACAGC 60.227 57.895 8.11 8.11 43.19 4.40
7175 7500 0.529833 TTGTTGTGTTGTGCCCACAG 59.470 50.000 1.02 0.00 43.19 3.66
7176 7501 0.529833 CTTGTTGTGTTGTGCCCACA 59.470 50.000 0.00 0.00 40.87 4.17
7177 7502 0.805711 GCTTGTTGTGTTGTGCCCAC 60.806 55.000 0.00 0.00 0.00 4.61
7178 7503 1.515020 GCTTGTTGTGTTGTGCCCA 59.485 52.632 0.00 0.00 0.00 5.36
7179 7504 1.227234 GGCTTGTTGTGTTGTGCCC 60.227 57.895 0.00 0.00 34.81 5.36
7180 7505 1.227234 GGGCTTGTTGTGTTGTGCC 60.227 57.895 0.00 0.00 39.61 5.01
7181 7506 0.108424 TTGGGCTTGTTGTGTTGTGC 60.108 50.000 0.00 0.00 0.00 4.57
7182 7507 1.067283 TGTTGGGCTTGTTGTGTTGTG 60.067 47.619 0.00 0.00 0.00 3.33
7183 7508 1.067213 GTGTTGGGCTTGTTGTGTTGT 60.067 47.619 0.00 0.00 0.00 3.32
7184 7509 1.067283 TGTGTTGGGCTTGTTGTGTTG 60.067 47.619 0.00 0.00 0.00 3.33
7185 7510 1.204467 CTGTGTTGGGCTTGTTGTGTT 59.796 47.619 0.00 0.00 0.00 3.32
7186 7511 0.817013 CTGTGTTGGGCTTGTTGTGT 59.183 50.000 0.00 0.00 0.00 3.72
7187 7512 0.102844 CCTGTGTTGGGCTTGTTGTG 59.897 55.000 0.00 0.00 0.00 3.33
7188 7513 0.033601 TCCTGTGTTGGGCTTGTTGT 60.034 50.000 0.00 0.00 0.00 3.32
7189 7514 1.110442 TTCCTGTGTTGGGCTTGTTG 58.890 50.000 0.00 0.00 0.00 3.33
7190 7515 1.111277 GTTCCTGTGTTGGGCTTGTT 58.889 50.000 0.00 0.00 0.00 2.83
7191 7516 0.033601 TGTTCCTGTGTTGGGCTTGT 60.034 50.000 0.00 0.00 0.00 3.16
7192 7517 0.385390 GTGTTCCTGTGTTGGGCTTG 59.615 55.000 0.00 0.00 0.00 4.01
7193 7518 1.101049 CGTGTTCCTGTGTTGGGCTT 61.101 55.000 0.00 0.00 0.00 4.35
7194 7519 1.525995 CGTGTTCCTGTGTTGGGCT 60.526 57.895 0.00 0.00 0.00 5.19
7195 7520 1.525077 TCGTGTTCCTGTGTTGGGC 60.525 57.895 0.00 0.00 0.00 5.36
7196 7521 1.495584 CGTCGTGTTCCTGTGTTGGG 61.496 60.000 0.00 0.00 0.00 4.12
7197 7522 0.528901 TCGTCGTGTTCCTGTGTTGG 60.529 55.000 0.00 0.00 0.00 3.77
7198 7523 1.282817 TTCGTCGTGTTCCTGTGTTG 58.717 50.000 0.00 0.00 0.00 3.33
7199 7524 2.012937 TTTCGTCGTGTTCCTGTGTT 57.987 45.000 0.00 0.00 0.00 3.32
7200 7525 2.234300 ATTTCGTCGTGTTCCTGTGT 57.766 45.000 0.00 0.00 0.00 3.72
7201 7526 3.491639 TGTTATTTCGTCGTGTTCCTGTG 59.508 43.478 0.00 0.00 0.00 3.66
7202 7527 3.492011 GTGTTATTTCGTCGTGTTCCTGT 59.508 43.478 0.00 0.00 0.00 4.00
7203 7528 3.491639 TGTGTTATTTCGTCGTGTTCCTG 59.508 43.478 0.00 0.00 0.00 3.86
7204 7529 3.719924 TGTGTTATTTCGTCGTGTTCCT 58.280 40.909 0.00 0.00 0.00 3.36
7205 7530 4.657075 ATGTGTTATTTCGTCGTGTTCC 57.343 40.909 0.00 0.00 0.00 3.62
7206 7531 6.242830 CGTTTATGTGTTATTTCGTCGTGTTC 59.757 38.462 0.00 0.00 0.00 3.18
7207 7532 6.066410 CGTTTATGTGTTATTTCGTCGTGTT 58.934 36.000 0.00 0.00 0.00 3.32
7208 7533 5.388682 CCGTTTATGTGTTATTTCGTCGTGT 60.389 40.000 0.00 0.00 0.00 4.49
7209 7534 5.010749 CCGTTTATGTGTTATTTCGTCGTG 58.989 41.667 0.00 0.00 0.00 4.35
7210 7535 4.434593 GCCGTTTATGTGTTATTTCGTCGT 60.435 41.667 0.00 0.00 0.00 4.34
7211 7536 4.017271 GCCGTTTATGTGTTATTTCGTCG 58.983 43.478 0.00 0.00 0.00 5.12
7212 7537 4.960329 TGCCGTTTATGTGTTATTTCGTC 58.040 39.130 0.00 0.00 0.00 4.20
7213 7538 4.142773 CCTGCCGTTTATGTGTTATTTCGT 60.143 41.667 0.00 0.00 0.00 3.85
7214 7539 4.339429 CCTGCCGTTTATGTGTTATTTCG 58.661 43.478 0.00 0.00 0.00 3.46
7215 7540 4.668289 CCCTGCCGTTTATGTGTTATTTC 58.332 43.478 0.00 0.00 0.00 2.17
7216 7541 3.119280 GCCCTGCCGTTTATGTGTTATTT 60.119 43.478 0.00 0.00 0.00 1.40
7217 7542 2.425668 GCCCTGCCGTTTATGTGTTATT 59.574 45.455 0.00 0.00 0.00 1.40
7218 7543 2.021457 GCCCTGCCGTTTATGTGTTAT 58.979 47.619 0.00 0.00 0.00 1.89
7219 7544 1.455248 GCCCTGCCGTTTATGTGTTA 58.545 50.000 0.00 0.00 0.00 2.41
7220 7545 1.582610 CGCCCTGCCGTTTATGTGTT 61.583 55.000 0.00 0.00 0.00 3.32
7221 7546 2.038269 CGCCCTGCCGTTTATGTGT 61.038 57.895 0.00 0.00 0.00 3.72
7222 7547 2.760159 CCGCCCTGCCGTTTATGTG 61.760 63.158 0.00 0.00 0.00 3.21
7223 7548 2.437716 CCGCCCTGCCGTTTATGT 60.438 61.111 0.00 0.00 0.00 2.29
7224 7549 2.437716 ACCGCCCTGCCGTTTATG 60.438 61.111 0.00 0.00 0.00 1.90
7225 7550 2.437716 CACCGCCCTGCCGTTTAT 60.438 61.111 0.00 0.00 0.00 1.40
7226 7551 4.708386 CCACCGCCCTGCCGTTTA 62.708 66.667 0.00 0.00 0.00 2.01
7238 7563 4.812476 TTCTCGCCATCGCCACCG 62.812 66.667 0.00 0.00 35.26 4.94
7239 7564 2.650813 ATCTTCTCGCCATCGCCACC 62.651 60.000 0.00 0.00 35.26 4.61
7240 7565 0.032130 TATCTTCTCGCCATCGCCAC 59.968 55.000 0.00 0.00 35.26 5.01
7241 7566 0.750249 TTATCTTCTCGCCATCGCCA 59.250 50.000 0.00 0.00 35.26 5.69
7242 7567 1.140816 GTTATCTTCTCGCCATCGCC 58.859 55.000 0.00 0.00 35.26 5.54
7243 7568 0.778815 CGTTATCTTCTCGCCATCGC 59.221 55.000 0.00 0.00 35.26 4.58
7244 7569 2.401017 TCGTTATCTTCTCGCCATCG 57.599 50.000 0.00 0.00 0.00 3.84
7245 7570 4.167554 AGATCGTTATCTTCTCGCCATC 57.832 45.455 0.00 0.00 39.55 3.51
7246 7571 5.707242 TTAGATCGTTATCTTCTCGCCAT 57.293 39.130 0.00 0.00 39.55 4.40
7247 7572 5.473846 AGATTAGATCGTTATCTTCTCGCCA 59.526 40.000 0.00 0.00 39.55 5.69
7248 7573 5.797934 CAGATTAGATCGTTATCTTCTCGCC 59.202 44.000 5.01 0.00 39.55 5.54
7249 7574 5.797934 CCAGATTAGATCGTTATCTTCTCGC 59.202 44.000 5.01 0.00 39.55 5.03
7250 7575 6.904498 ACCAGATTAGATCGTTATCTTCTCG 58.096 40.000 5.01 0.00 39.55 4.04
7251 7576 7.810759 GGAACCAGATTAGATCGTTATCTTCTC 59.189 40.741 5.01 3.47 39.55 2.87
7252 7577 7.522399 CGGAACCAGATTAGATCGTTATCTTCT 60.522 40.741 5.01 0.00 39.55 2.85
7253 7578 6.583050 CGGAACCAGATTAGATCGTTATCTTC 59.417 42.308 5.01 2.37 39.55 2.87
7254 7579 6.448006 CGGAACCAGATTAGATCGTTATCTT 58.552 40.000 5.01 0.00 39.55 2.40
7255 7580 5.047943 CCGGAACCAGATTAGATCGTTATCT 60.048 44.000 0.00 2.60 44.80 1.98
7256 7581 5.162075 CCGGAACCAGATTAGATCGTTATC 58.838 45.833 0.00 0.00 0.00 1.75
7257 7582 4.587684 ACCGGAACCAGATTAGATCGTTAT 59.412 41.667 9.46 0.00 0.00 1.89
7258 7583 3.956199 ACCGGAACCAGATTAGATCGTTA 59.044 43.478 9.46 0.00 0.00 3.18
7259 7584 2.764572 ACCGGAACCAGATTAGATCGTT 59.235 45.455 9.46 0.00 0.00 3.85
7260 7585 2.100916 CACCGGAACCAGATTAGATCGT 59.899 50.000 9.46 0.00 0.00 3.73
7261 7586 2.545952 CCACCGGAACCAGATTAGATCG 60.546 54.545 9.46 0.00 0.00 3.69
7262 7587 2.434702 ACCACCGGAACCAGATTAGATC 59.565 50.000 9.46 0.00 0.00 2.75
7263 7588 2.170607 CACCACCGGAACCAGATTAGAT 59.829 50.000 9.46 0.00 0.00 1.98
7264 7589 1.553248 CACCACCGGAACCAGATTAGA 59.447 52.381 9.46 0.00 0.00 2.10
7265 7590 1.406887 CCACCACCGGAACCAGATTAG 60.407 57.143 9.46 0.00 0.00 1.73
7266 7591 0.616371 CCACCACCGGAACCAGATTA 59.384 55.000 9.46 0.00 0.00 1.75
7267 7592 1.378762 CCACCACCGGAACCAGATT 59.621 57.895 9.46 0.00 0.00 2.40
7268 7593 1.846124 ACCACCACCGGAACCAGAT 60.846 57.895 9.46 0.00 0.00 2.90
7269 7594 2.446994 ACCACCACCGGAACCAGA 60.447 61.111 9.46 0.00 0.00 3.86
7270 7595 2.281484 CACCACCACCGGAACCAG 60.281 66.667 9.46 0.00 0.00 4.00
7271 7596 3.879885 CCACCACCACCGGAACCA 61.880 66.667 9.46 0.00 0.00 3.67
7272 7597 4.653888 CCCACCACCACCGGAACC 62.654 72.222 9.46 0.00 0.00 3.62
7273 7598 4.653888 CCCCACCACCACCGGAAC 62.654 72.222 9.46 0.00 0.00 3.62
7277 7602 4.344865 CTTCCCCCACCACCACCG 62.345 72.222 0.00 0.00 0.00 4.94
7278 7603 4.678743 GCTTCCCCCACCACCACC 62.679 72.222 0.00 0.00 0.00 4.61
7281 7606 3.728373 ATCGCTTCCCCCACCACC 61.728 66.667 0.00 0.00 0.00 4.61
7282 7607 2.438434 CATCGCTTCCCCCACCAC 60.438 66.667 0.00 0.00 0.00 4.16
7283 7608 3.727258 CCATCGCTTCCCCCACCA 61.727 66.667 0.00 0.00 0.00 4.17
7284 7609 3.406595 CTCCATCGCTTCCCCCACC 62.407 68.421 0.00 0.00 0.00 4.61
7285 7610 2.190578 CTCCATCGCTTCCCCCAC 59.809 66.667 0.00 0.00 0.00 4.61
7286 7611 3.797353 GCTCCATCGCTTCCCCCA 61.797 66.667 0.00 0.00 0.00 4.96
7287 7612 4.570874 GGCTCCATCGCTTCCCCC 62.571 72.222 0.00 0.00 0.00 5.40
7288 7613 3.125376 ATGGCTCCATCGCTTCCCC 62.125 63.158 0.00 0.00 29.42 4.81
7289 7614 1.599240 GATGGCTCCATCGCTTCCC 60.599 63.158 12.62 0.00 42.55 3.97
7290 7615 4.055654 GATGGCTCCATCGCTTCC 57.944 61.111 12.62 0.00 42.55 3.46
7312 7637 2.510238 AGCTTCGCACGATGGCTC 60.510 61.111 12.88 0.00 31.56 4.70
7313 7638 2.816958 CAGCTTCGCACGATGGCT 60.817 61.111 12.88 12.88 35.26 4.75
7314 7639 3.869272 CCAGCTTCGCACGATGGC 61.869 66.667 7.86 8.72 0.00 4.40
7315 7640 3.197790 CCCAGCTTCGCACGATGG 61.198 66.667 7.86 6.20 0.00 3.51
7316 7641 2.125552 TCCCAGCTTCGCACGATG 60.126 61.111 0.00 0.00 0.00 3.84
7317 7642 1.680522 ATCTCCCAGCTTCGCACGAT 61.681 55.000 0.00 0.00 0.00 3.73
7318 7643 2.351244 ATCTCCCAGCTTCGCACGA 61.351 57.895 0.00 0.00 0.00 4.35
7319 7644 2.169789 CATCTCCCAGCTTCGCACG 61.170 63.158 0.00 0.00 0.00 5.34
7320 7645 0.179062 ATCATCTCCCAGCTTCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
7321 7646 0.179065 CATCATCTCCCAGCTTCGCA 60.179 55.000 0.00 0.00 0.00 5.10
7322 7647 0.883814 CCATCATCTCCCAGCTTCGC 60.884 60.000 0.00 0.00 0.00 4.70
7323 7648 0.755079 TCCATCATCTCCCAGCTTCG 59.245 55.000 0.00 0.00 0.00 3.79
7324 7649 2.106166 ACATCCATCATCTCCCAGCTTC 59.894 50.000 0.00 0.00 0.00 3.86
7325 7650 2.133520 ACATCCATCATCTCCCAGCTT 58.866 47.619 0.00 0.00 0.00 3.74
7326 7651 1.420514 CACATCCATCATCTCCCAGCT 59.579 52.381 0.00 0.00 0.00 4.24
7327 7652 1.419012 TCACATCCATCATCTCCCAGC 59.581 52.381 0.00 0.00 0.00 4.85
7328 7653 3.559384 CCATCACATCCATCATCTCCCAG 60.559 52.174 0.00 0.00 0.00 4.45
7329 7654 2.374170 CCATCACATCCATCATCTCCCA 59.626 50.000 0.00 0.00 0.00 4.37
7330 7655 2.878935 GCCATCACATCCATCATCTCCC 60.879 54.545 0.00 0.00 0.00 4.30
7331 7656 2.434428 GCCATCACATCCATCATCTCC 58.566 52.381 0.00 0.00 0.00 3.71
7332 7657 2.074576 CGCCATCACATCCATCATCTC 58.925 52.381 0.00 0.00 0.00 2.75
7333 7658 1.419012 ACGCCATCACATCCATCATCT 59.581 47.619 0.00 0.00 0.00 2.90
7334 7659 1.802960 GACGCCATCACATCCATCATC 59.197 52.381 0.00 0.00 0.00 2.92
7335 7660 1.419012 AGACGCCATCACATCCATCAT 59.581 47.619 0.00 0.00 0.00 2.45
7336 7661 0.832626 AGACGCCATCACATCCATCA 59.167 50.000 0.00 0.00 0.00 3.07
7337 7662 1.069823 AGAGACGCCATCACATCCATC 59.930 52.381 0.00 0.00 0.00 3.51
7338 7663 1.069823 GAGAGACGCCATCACATCCAT 59.930 52.381 0.00 0.00 0.00 3.41
7339 7664 0.461548 GAGAGACGCCATCACATCCA 59.538 55.000 0.00 0.00 0.00 3.41
7340 7665 0.749649 AGAGAGACGCCATCACATCC 59.250 55.000 0.00 0.00 0.00 3.51
7341 7666 2.468831 GAAGAGAGACGCCATCACATC 58.531 52.381 0.00 0.00 0.00 3.06
7342 7667 1.137872 GGAAGAGAGACGCCATCACAT 59.862 52.381 0.00 0.00 0.00 3.21
7343 7668 0.532573 GGAAGAGAGACGCCATCACA 59.467 55.000 0.00 0.00 0.00 3.58
7344 7669 0.820871 AGGAAGAGAGACGCCATCAC 59.179 55.000 0.00 0.00 0.00 3.06
7345 7670 0.820226 CAGGAAGAGAGACGCCATCA 59.180 55.000 0.00 0.00 0.00 3.07
7346 7671 0.103937 CCAGGAAGAGAGACGCCATC 59.896 60.000 0.00 0.00 0.00 3.51
7347 7672 1.333636 CCCAGGAAGAGAGACGCCAT 61.334 60.000 0.00 0.00 0.00 4.40
7348 7673 1.984570 CCCAGGAAGAGAGACGCCA 60.985 63.158 0.00 0.00 0.00 5.69
7349 7674 2.726351 CCCCAGGAAGAGAGACGCC 61.726 68.421 0.00 0.00 0.00 5.68
7350 7675 2.896443 CCCCAGGAAGAGAGACGC 59.104 66.667 0.00 0.00 0.00 5.19
7351 7676 2.896443 GCCCCAGGAAGAGAGACG 59.104 66.667 0.00 0.00 0.00 4.18
7352 7677 2.726351 CCGCCCCAGGAAGAGAGAC 61.726 68.421 0.00 0.00 0.00 3.36
7353 7678 2.364317 CCGCCCCAGGAAGAGAGA 60.364 66.667 0.00 0.00 0.00 3.10
7354 7679 4.168291 GCCGCCCCAGGAAGAGAG 62.168 72.222 0.00 0.00 0.00 3.20
7355 7680 2.815684 TTAGCCGCCCCAGGAAGAGA 62.816 60.000 0.00 0.00 0.00 3.10
7356 7681 2.317149 CTTAGCCGCCCCAGGAAGAG 62.317 65.000 0.00 0.00 0.00 2.85
7357 7682 2.285069 TTAGCCGCCCCAGGAAGA 60.285 61.111 0.00 0.00 0.00 2.87
7358 7683 2.190578 CTTAGCCGCCCCAGGAAG 59.809 66.667 0.00 0.00 0.00 3.46
7359 7684 4.109675 GCTTAGCCGCCCCAGGAA 62.110 66.667 0.00 0.00 0.00 3.36
7370 7695 4.179579 CTTTGGCGGCCGCTTAGC 62.180 66.667 45.23 30.71 41.60 3.09
7371 7696 4.179579 GCTTTGGCGGCCGCTTAG 62.180 66.667 45.23 36.03 41.60 2.18
7372 7697 4.715523 AGCTTTGGCGGCCGCTTA 62.716 61.111 45.23 32.62 44.37 3.09
7379 7704 0.387239 GTTACTTGCAGCTTTGGCGG 60.387 55.000 0.00 0.00 44.37 6.13
7380 7705 0.387239 GGTTACTTGCAGCTTTGGCG 60.387 55.000 0.00 0.00 44.37 5.69
7381 7706 0.673437 TGGTTACTTGCAGCTTTGGC 59.327 50.000 0.00 0.00 39.06 4.52
7382 7707 2.030805 GTCTGGTTACTTGCAGCTTTGG 60.031 50.000 0.00 0.00 0.00 3.28
7383 7708 2.030805 GGTCTGGTTACTTGCAGCTTTG 60.031 50.000 0.00 0.00 0.00 2.77
7384 7709 2.230660 GGTCTGGTTACTTGCAGCTTT 58.769 47.619 0.00 0.00 0.00 3.51
7385 7710 1.142870 TGGTCTGGTTACTTGCAGCTT 59.857 47.619 0.00 0.00 0.00 3.74
7386 7711 0.764890 TGGTCTGGTTACTTGCAGCT 59.235 50.000 0.00 0.00 0.00 4.24
7387 7712 1.826385 ATGGTCTGGTTACTTGCAGC 58.174 50.000 0.00 0.00 0.00 5.25
7388 7713 3.820467 TCAAATGGTCTGGTTACTTGCAG 59.180 43.478 0.00 0.00 0.00 4.41
7389 7714 3.826524 TCAAATGGTCTGGTTACTTGCA 58.173 40.909 0.00 0.00 0.00 4.08
7390 7715 4.037446 TGTTCAAATGGTCTGGTTACTTGC 59.963 41.667 0.00 0.00 0.00 4.01
7391 7716 5.766150 TGTTCAAATGGTCTGGTTACTTG 57.234 39.130 0.00 0.00 0.00 3.16
7392 7717 6.682861 GCTTTGTTCAAATGGTCTGGTTACTT 60.683 38.462 0.00 0.00 0.00 2.24
7393 7718 5.221244 GCTTTGTTCAAATGGTCTGGTTACT 60.221 40.000 0.00 0.00 0.00 2.24
7394 7719 4.982295 GCTTTGTTCAAATGGTCTGGTTAC 59.018 41.667 0.00 0.00 0.00 2.50
7395 7720 4.261405 CGCTTTGTTCAAATGGTCTGGTTA 60.261 41.667 0.00 0.00 0.00 2.85
7396 7721 3.490761 CGCTTTGTTCAAATGGTCTGGTT 60.491 43.478 0.00 0.00 0.00 3.67
7397 7722 2.034558 CGCTTTGTTCAAATGGTCTGGT 59.965 45.455 0.00 0.00 0.00 4.00
7398 7723 2.034558 ACGCTTTGTTCAAATGGTCTGG 59.965 45.455 0.00 0.00 0.00 3.86
7399 7724 3.243035 TGACGCTTTGTTCAAATGGTCTG 60.243 43.478 19.37 4.22 0.00 3.51
7400 7725 2.948979 TGACGCTTTGTTCAAATGGTCT 59.051 40.909 19.37 0.00 0.00 3.85
7401 7726 3.243068 ACTGACGCTTTGTTCAAATGGTC 60.243 43.478 15.41 15.41 0.00 4.02
7402 7727 2.687935 ACTGACGCTTTGTTCAAATGGT 59.312 40.909 0.00 0.82 0.00 3.55
7403 7728 3.354089 ACTGACGCTTTGTTCAAATGG 57.646 42.857 0.00 0.00 0.00 3.16
7404 7729 3.908382 GCTACTGACGCTTTGTTCAAATG 59.092 43.478 0.00 0.00 0.00 2.32
7405 7730 3.563808 TGCTACTGACGCTTTGTTCAAAT 59.436 39.130 0.00 0.00 0.00 2.32
7406 7731 2.939756 TGCTACTGACGCTTTGTTCAAA 59.060 40.909 0.00 0.00 0.00 2.69
7407 7732 2.556257 TGCTACTGACGCTTTGTTCAA 58.444 42.857 0.00 0.00 0.00 2.69
7408 7733 2.232756 TGCTACTGACGCTTTGTTCA 57.767 45.000 0.00 0.00 0.00 3.18
7409 7734 2.736721 TCATGCTACTGACGCTTTGTTC 59.263 45.455 0.00 0.00 0.00 3.18
7410 7735 2.480419 GTCATGCTACTGACGCTTTGTT 59.520 45.455 0.00 0.00 36.50 2.83
7411 7736 2.069273 GTCATGCTACTGACGCTTTGT 58.931 47.619 0.00 0.00 36.50 2.83
7412 7737 2.068519 TGTCATGCTACTGACGCTTTG 58.931 47.619 9.16 0.00 46.89 2.77
7413 7738 2.455674 TGTCATGCTACTGACGCTTT 57.544 45.000 9.16 0.00 46.89 3.51
7414 7739 2.455674 TTGTCATGCTACTGACGCTT 57.544 45.000 9.16 0.00 46.89 4.68
7415 7740 2.029020 TCTTTGTCATGCTACTGACGCT 60.029 45.455 9.16 0.00 46.89 5.07
7416 7741 2.337583 TCTTTGTCATGCTACTGACGC 58.662 47.619 9.16 0.00 46.89 5.19
7417 7742 2.926200 CCTCTTTGTCATGCTACTGACG 59.074 50.000 9.16 0.00 46.89 4.35
7418 7743 4.193826 TCCTCTTTGTCATGCTACTGAC 57.806 45.455 7.44 7.44 44.70 3.51
7419 7744 4.890158 TTCCTCTTTGTCATGCTACTGA 57.110 40.909 0.00 0.00 0.00 3.41
7420 7745 4.201891 GCATTCCTCTTTGTCATGCTACTG 60.202 45.833 0.00 0.00 37.78 2.74
7421 7746 3.944015 GCATTCCTCTTTGTCATGCTACT 59.056 43.478 0.00 0.00 37.78 2.57
7422 7747 3.242543 CGCATTCCTCTTTGTCATGCTAC 60.243 47.826 0.00 0.00 38.49 3.58
7423 7748 2.938451 CGCATTCCTCTTTGTCATGCTA 59.062 45.455 0.00 0.00 38.49 3.49
7424 7749 1.741706 CGCATTCCTCTTTGTCATGCT 59.258 47.619 0.00 0.00 38.49 3.79
7425 7750 1.796617 GCGCATTCCTCTTTGTCATGC 60.797 52.381 0.30 0.00 37.48 4.06
7426 7751 1.741706 AGCGCATTCCTCTTTGTCATG 59.258 47.619 11.47 0.00 0.00 3.07
7427 7752 1.741706 CAGCGCATTCCTCTTTGTCAT 59.258 47.619 11.47 0.00 0.00 3.06
7428 7753 1.159285 CAGCGCATTCCTCTTTGTCA 58.841 50.000 11.47 0.00 0.00 3.58
7429 7754 1.442769 TCAGCGCATTCCTCTTTGTC 58.557 50.000 11.47 0.00 0.00 3.18
7430 7755 1.896220 TTCAGCGCATTCCTCTTTGT 58.104 45.000 11.47 0.00 0.00 2.83
7431 7756 2.421073 TGATTCAGCGCATTCCTCTTTG 59.579 45.455 11.47 0.00 0.00 2.77
7432 7757 2.421424 GTGATTCAGCGCATTCCTCTTT 59.579 45.455 11.47 0.00 0.00 2.52
7433 7758 2.012673 GTGATTCAGCGCATTCCTCTT 58.987 47.619 11.47 0.00 0.00 2.85
7434 7759 1.661341 GTGATTCAGCGCATTCCTCT 58.339 50.000 11.47 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.