Multiple sequence alignment - TraesCS5B01G071500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G071500 chr5B 100.000 5866 0 0 723 6588 82472376 82478241 0.000000e+00 10833.0
1 TraesCS5B01G071500 chr5B 96.802 344 10 1 2261 2603 480521481 480521824 2.060000e-159 573.0
2 TraesCS5B01G071500 chr5B 100.000 278 0 0 1 278 82471654 82471931 1.270000e-141 514.0
3 TraesCS5B01G071500 chr5B 91.860 86 6 1 6036 6121 477498430 477498514 1.160000e-22 119.0
4 TraesCS5B01G071500 chr5D 95.723 2268 77 13 4126 6381 71888892 71886633 0.000000e+00 3633.0
5 TraesCS5B01G071500 chr5D 98.231 1583 23 3 2601 4182 71890443 71888865 0.000000e+00 2763.0
6 TraesCS5B01G071500 chr5D 95.096 1570 45 10 723 2264 71892006 71890441 0.000000e+00 2444.0
7 TraesCS5B01G071500 chr5D 90.753 292 9 5 1 278 71892335 71892048 2.240000e-99 374.0
8 TraesCS5B01G071500 chr5D 93.182 44 3 0 6452 6495 476710167 476710210 1.530000e-06 65.8
9 TraesCS5B01G071500 chr5A 95.097 2162 66 23 4155 6305 64367738 64365606 0.000000e+00 3369.0
10 TraesCS5B01G071500 chr5A 96.799 1562 34 9 2601 4154 64369263 64367710 0.000000e+00 2593.0
11 TraesCS5B01G071500 chr5A 91.050 1609 68 39 723 2264 64370860 64369261 0.000000e+00 2104.0
12 TraesCS5B01G071500 chr5A 88.693 283 8 7 1 269 64371187 64370915 2.290000e-84 324.0
13 TraesCS5B01G071500 chr5A 90.323 93 5 4 6306 6396 64365553 64365463 1.160000e-22 119.0
14 TraesCS5B01G071500 chr5A 93.243 74 3 1 4155 4226 64367676 64367749 2.510000e-19 108.0
15 TraesCS5B01G071500 chr4A 97.674 344 7 1 2262 2604 714743640 714743297 2.050000e-164 590.0
16 TraesCS5B01G071500 chr4A 89.773 88 6 3 6035 6121 587726536 587726451 6.980000e-20 110.0
17 TraesCS5B01G071500 chr4A 93.056 72 5 0 4155 4226 338747837 338747766 9.030000e-19 106.0
18 TraesCS5B01G071500 chr4A 84.404 109 15 2 6196 6303 568376015 568376122 9.030000e-19 106.0
19 TraesCS5B01G071500 chr4A 87.654 81 9 1 6224 6303 622973263 622973183 7.030000e-15 93.5
20 TraesCS5B01G071500 chrUn 97.668 343 7 1 2262 2604 461112459 461112800 7.360000e-164 588.0
21 TraesCS5B01G071500 chrUn 94.366 71 4 0 4156 4226 110464751 110464821 6.980000e-20 110.0
22 TraesCS5B01G071500 chr3B 97.110 346 9 1 2260 2604 382660240 382660585 3.420000e-162 582.0
23 TraesCS5B01G071500 chr3B 93.151 73 4 1 4155 4226 501117632 501117560 9.030000e-19 106.0
24 TraesCS5B01G071500 chr3B 88.506 87 9 1 6035 6121 296634570 296634485 3.250000e-18 104.0
25 TraesCS5B01G071500 chr6B 97.640 339 7 1 2264 2601 233170252 233170590 1.230000e-161 580.0
26 TraesCS5B01G071500 chr6B 88.764 89 9 1 6035 6123 286691356 286691443 2.510000e-19 108.0
27 TraesCS5B01G071500 chr6B 86.735 98 10 3 6400 6495 525160187 525160283 9.030000e-19 106.0
28 TraesCS5B01G071500 chr6B 88.506 87 9 1 6035 6121 224859793 224859878 3.250000e-18 104.0
29 TraesCS5B01G071500 chr7B 96.830 347 8 2 2256 2601 176492201 176492545 1.590000e-160 577.0
30 TraesCS5B01G071500 chr7B 97.076 342 8 2 2263 2603 739452349 739452009 5.730000e-160 575.0
31 TraesCS5B01G071500 chr7B 93.258 89 4 2 6036 6123 323849784 323849697 5.360000e-26 130.0
32 TraesCS5B01G071500 chr7B 86.905 84 7 4 6402 6483 67813971 67814052 2.530000e-14 91.6
33 TraesCS5B01G071500 chr7B 97.619 42 1 0 4113 4154 152492843 152492802 9.160000e-09 73.1
34 TraesCS5B01G071500 chr2B 96.802 344 10 1 2261 2603 244938000 244937657 2.060000e-159 573.0
35 TraesCS5B01G071500 chr2B 96.532 346 11 1 2259 2603 730083794 730084139 7.410000e-159 571.0
36 TraesCS5B01G071500 chr1B 90.083 121 8 2 4110 4226 386519818 386519938 3.180000e-33 154.0
37 TraesCS5B01G071500 chr1B 87.778 90 8 3 6034 6122 32394250 32394163 1.170000e-17 102.0
38 TraesCS5B01G071500 chr1B 78.750 160 21 8 2019 2177 552965389 552965242 1.960000e-15 95.3
39 TraesCS5B01G071500 chr1B 97.727 44 1 0 4113 4156 70183468 70183425 7.080000e-10 76.8
40 TraesCS5B01G071500 chr2D 89.899 99 9 1 6400 6497 417995834 417995736 6.940000e-25 126.0
41 TraesCS5B01G071500 chr2D 85.938 64 7 2 4093 4154 51086675 51086738 4.260000e-07 67.6
42 TraesCS5B01G071500 chr7A 85.088 114 14 3 6192 6303 335937800 335937688 5.400000e-21 113.0
43 TraesCS5B01G071500 chr7A 85.542 83 12 0 6220 6302 11577313 11577395 3.270000e-13 87.9
44 TraesCS5B01G071500 chr1A 86.538 104 13 1 6393 6495 551909368 551909265 5.400000e-21 113.0
45 TraesCS5B01G071500 chr4B 94.366 71 4 0 4156 4226 660491507 660491577 6.980000e-20 110.0
46 TraesCS5B01G071500 chr4B 90.625 64 5 1 6435 6497 526735491 526735554 4.230000e-12 84.2
47 TraesCS5B01G071500 chr3D 93.056 72 3 1 4155 4226 420804292 420804361 3.250000e-18 104.0
48 TraesCS5B01G071500 chr2A 86.905 84 10 1 6220 6302 374084205 374084122 7.030000e-15 93.5
49 TraesCS5B01G071500 chr2A 87.879 66 5 3 6430 6494 769485893 769485830 2.550000e-09 75.0
50 TraesCS5B01G071500 chr7D 85.714 84 11 1 6220 6303 30828285 30828203 3.270000e-13 87.9
51 TraesCS5B01G071500 chr7D 79.646 113 20 3 6192 6303 95279094 95279204 1.970000e-10 78.7
52 TraesCS5B01G071500 chr6A 91.379 58 5 0 6437 6494 511531334 511531391 5.480000e-11 80.5
53 TraesCS5B01G071500 chr6A 100.000 28 0 0 6448 6475 565028507 565028534 1.200000e-02 52.8
54 TraesCS5B01G071500 chr4D 100.000 42 0 0 4113 4154 486185341 486185382 1.970000e-10 78.7
55 TraesCS5B01G071500 chr3A 94.000 50 3 0 4105 4154 507310490 507310441 7.080000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G071500 chr5B 82471654 82478241 6587 False 5673.5 10833 100.00000 1 6588 2 chr5B.!!$F3 6587
1 TraesCS5B01G071500 chr5D 71886633 71892335 5702 True 2303.5 3633 94.95075 1 6381 4 chr5D.!!$R1 6380
2 TraesCS5B01G071500 chr5A 64365463 64371187 5724 True 1701.8 3369 92.39240 1 6396 5 chr5A.!!$R1 6395

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 244 2.860628 GCGCACGCTACTCGATTGG 61.861 63.158 7.96 0.0 41.67 3.16 F
1442 1528 0.109597 GGTGCTGCGGTTCTGATTTG 60.110 55.000 0.00 0.0 0.00 2.32 F
2413 2508 0.323725 GCCATTGCTGGGAGAGGAAA 60.324 55.000 0.00 0.0 43.36 3.13 F
2543 2638 0.030235 GTTGGACGTCTGTTTTGGGC 59.970 55.000 16.46 0.0 0.00 5.36 F
2544 2639 0.106918 TTGGACGTCTGTTTTGGGCT 60.107 50.000 16.46 0.0 0.00 5.19 F
2545 2640 0.534203 TGGACGTCTGTTTTGGGCTC 60.534 55.000 16.46 0.0 0.00 4.70 F
2546 2641 0.534203 GGACGTCTGTTTTGGGCTCA 60.534 55.000 16.46 0.0 0.00 4.26 F
2547 2642 0.586802 GACGTCTGTTTTGGGCTCAC 59.413 55.000 8.70 0.0 0.00 3.51 F
2550 2645 0.586802 GTCTGTTTTGGGCTCACGTC 59.413 55.000 0.00 0.0 0.00 4.34 F
2551 2646 0.878523 TCTGTTTTGGGCTCACGTCG 60.879 55.000 0.00 0.0 0.00 5.12 F
2552 2647 1.153329 TGTTTTGGGCTCACGTCGT 60.153 52.632 0.00 0.0 0.00 4.34 F
5358 5494 0.036010 TAGTGCTTCAGCCTCAAGCC 60.036 55.000 0.00 0.0 44.90 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2135 2230 0.185901 ACACACAGGACAAAGGGCAT 59.814 50.000 0.00 0.00 0.00 4.40 R
2524 2619 0.030235 GCCCAAAACAGACGTCCAAC 59.970 55.000 13.01 0.00 0.00 3.77 R
3869 3970 1.287442 TGGGCATACATGGTCACCATT 59.713 47.619 6.58 1.51 42.23 3.16 R
4068 4170 5.014123 TGGGAACAAGACTGATAATTCACCT 59.986 40.000 0.00 0.00 37.44 4.00 R
4484 4617 8.831715 AATCAAGGGTTAACAAAACAATCATC 57.168 30.769 8.10 0.00 0.00 2.92 R
4900 5034 4.634883 AGCAAATGCACTGAGTAGAAGATG 59.365 41.667 8.28 0.00 45.16 2.90 R
4921 5055 4.648970 GAGCATCAGTAAACCGTTAAAGC 58.351 43.478 0.00 0.00 33.17 3.51 R
5118 5254 9.427127 GCACTAAATCGAGAATGAAATTTCTAC 57.573 33.333 18.64 9.94 36.07 2.59 R
5307 5443 7.254727 GCACACATGTTTGAAATAATTTGGTGT 60.255 33.333 16.10 0.00 35.22 4.16 R
5358 5494 1.808945 GCTCCTGACATGAAGTGGTTG 59.191 52.381 0.00 0.00 0.00 3.77 R
5366 5502 0.907486 CCTTCTGGCTCCTGACATGA 59.093 55.000 0.00 0.00 0.00 3.07 R
6476 6676 0.033781 CGTACTCCCACCGTTCCAAA 59.966 55.000 0.00 0.00 0.00 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 177 3.721706 CCACTCCTGCTCCCACCC 61.722 72.222 0.00 0.00 0.00 4.61
166 178 3.721706 CACTCCTGCTCCCACCCC 61.722 72.222 0.00 0.00 0.00 4.95
167 179 4.270153 ACTCCTGCTCCCACCCCA 62.270 66.667 0.00 0.00 0.00 4.96
168 180 3.406200 CTCCTGCTCCCACCCCAG 61.406 72.222 0.00 0.00 0.00 4.45
232 244 2.860628 GCGCACGCTACTCGATTGG 61.861 63.158 7.96 0.00 41.67 3.16
1141 1202 1.991264 GTACGTCCCTCTTCGCTTTTC 59.009 52.381 0.00 0.00 0.00 2.29
1164 1228 1.135575 CGCCCTTGTTTTCTGCTCATC 60.136 52.381 0.00 0.00 0.00 2.92
1194 1270 2.820197 GGGAATTGAACTGAACTGGGTC 59.180 50.000 0.00 0.00 0.00 4.46
1345 1421 3.607422 TTCGCAACTCAATTCTGTGTG 57.393 42.857 0.00 0.00 29.86 3.82
1374 1452 6.145209 GCACTGTAGATTGCATATCACTGTAG 59.855 42.308 10.26 10.42 38.68 2.74
1381 1459 7.796054 AGATTGCATATCACTGTAGTAGGTTT 58.204 34.615 10.26 0.00 0.00 3.27
1415 1493 9.273016 AGGATTGTATTTAGGTATTGTGAATCG 57.727 33.333 0.00 0.00 0.00 3.34
1419 1497 6.987992 TGTATTTAGGTATTGTGAATCGTCCC 59.012 38.462 0.00 0.00 0.00 4.46
1421 1499 1.829222 AGGTATTGTGAATCGTCCCGT 59.171 47.619 0.00 0.00 0.00 5.28
1442 1528 0.109597 GGTGCTGCGGTTCTGATTTG 60.110 55.000 0.00 0.00 0.00 2.32
1536 1622 3.924686 CGTGTAAGTCCGCTTTAGTTCAT 59.075 43.478 0.00 0.00 36.22 2.57
1541 1635 7.064253 GTGTAAGTCCGCTTTAGTTCATATTGT 59.936 37.037 0.00 0.00 36.22 2.71
1664 1759 3.486383 TCAGGGGTTCTTGATTGTTGAC 58.514 45.455 0.00 0.00 0.00 3.18
1674 1769 2.225467 TGATTGTTGACGTTGCATCCA 58.775 42.857 0.00 0.00 0.00 3.41
1680 1775 3.181482 TGTTGACGTTGCATCCACAATTT 60.181 39.130 0.00 0.00 0.00 1.82
1769 1864 2.024176 TGAGTTAGCAGAATTCCGCC 57.976 50.000 10.06 0.00 0.00 6.13
1821 1916 5.765182 ACAGTATTACTCAGCCATTTATGCC 59.235 40.000 0.00 0.00 0.00 4.40
1918 2013 2.300152 GAGTATCCGATTCAGCCCATGA 59.700 50.000 0.00 0.00 35.62 3.07
1933 2028 2.426522 CCATGACATGGTTTCACGAGT 58.573 47.619 24.15 0.00 45.54 4.18
1996 2091 4.142816 CCTTTCTGTCTTGTATTTCCGCTG 60.143 45.833 0.00 0.00 0.00 5.18
2133 2228 1.075482 CACCTTCTGTGGCCCATGT 59.925 57.895 0.00 0.00 41.52 3.21
2135 2230 1.379916 CCTTCTGTGGCCCATGTGA 59.620 57.895 0.00 0.00 0.00 3.58
2197 2292 0.604578 TGCCCAGCTCAGAAATTTGC 59.395 50.000 0.00 0.00 0.00 3.68
2285 2380 3.474600 GAGCATCTCCAATAGCATGTGT 58.525 45.455 0.00 0.00 0.00 3.72
2286 2381 4.635223 GAGCATCTCCAATAGCATGTGTA 58.365 43.478 0.00 0.00 0.00 2.90
2287 2382 5.238624 AGCATCTCCAATAGCATGTGTAT 57.761 39.130 0.00 0.00 0.00 2.29
2288 2383 6.364568 AGCATCTCCAATAGCATGTGTATA 57.635 37.500 0.00 0.00 0.00 1.47
2289 2384 6.955364 AGCATCTCCAATAGCATGTGTATAT 58.045 36.000 0.00 0.00 0.00 0.86
2290 2385 7.400439 AGCATCTCCAATAGCATGTGTATATT 58.600 34.615 0.00 0.00 0.00 1.28
2291 2386 7.886970 AGCATCTCCAATAGCATGTGTATATTT 59.113 33.333 0.00 0.00 0.00 1.40
2292 2387 7.966753 GCATCTCCAATAGCATGTGTATATTTG 59.033 37.037 0.00 0.00 0.00 2.32
2293 2388 7.984422 TCTCCAATAGCATGTGTATATTTGG 57.016 36.000 0.00 0.00 0.00 3.28
2294 2389 7.744733 TCTCCAATAGCATGTGTATATTTGGA 58.255 34.615 0.00 0.00 0.00 3.53
2295 2390 8.385491 TCTCCAATAGCATGTGTATATTTGGAT 58.615 33.333 0.00 0.00 0.00 3.41
2296 2391 8.339344 TCCAATAGCATGTGTATATTTGGATG 57.661 34.615 0.00 0.00 0.00 3.51
2297 2392 7.944000 TCCAATAGCATGTGTATATTTGGATGT 59.056 33.333 0.00 0.00 0.00 3.06
2298 2393 8.239314 CCAATAGCATGTGTATATTTGGATGTC 58.761 37.037 0.00 0.00 0.00 3.06
2299 2394 9.006839 CAATAGCATGTGTATATTTGGATGTCT 57.993 33.333 0.00 0.00 0.00 3.41
2337 2432 7.089770 GACAATGGTCTAAAAAGATTCCCTC 57.910 40.000 0.00 0.00 40.99 4.30
2338 2433 6.552008 ACAATGGTCTAAAAAGATTCCCTCA 58.448 36.000 0.00 0.00 0.00 3.86
2339 2434 7.184862 ACAATGGTCTAAAAAGATTCCCTCAT 58.815 34.615 0.00 0.00 0.00 2.90
2340 2435 8.336235 ACAATGGTCTAAAAAGATTCCCTCATA 58.664 33.333 0.00 0.00 0.00 2.15
2341 2436 9.359653 CAATGGTCTAAAAAGATTCCCTCATAT 57.640 33.333 0.00 0.00 0.00 1.78
2344 2439 8.998814 TGGTCTAAAAAGATTCCCTCATATACA 58.001 33.333 0.00 0.00 0.00 2.29
2345 2440 9.274206 GGTCTAAAAAGATTCCCTCATATACAC 57.726 37.037 0.00 0.00 0.00 2.90
2346 2441 9.832445 GTCTAAAAAGATTCCCTCATATACACA 57.168 33.333 0.00 0.00 0.00 3.72
2349 2444 8.697507 AAAAAGATTCCCTCATATACACATCC 57.302 34.615 0.00 0.00 0.00 3.51
2350 2445 7.392766 AAAGATTCCCTCATATACACATCCA 57.607 36.000 0.00 0.00 0.00 3.41
2351 2446 6.617782 AGATTCCCTCATATACACATCCAG 57.382 41.667 0.00 0.00 0.00 3.86
2352 2447 6.087456 AGATTCCCTCATATACACATCCAGT 58.913 40.000 0.00 0.00 0.00 4.00
2353 2448 6.560304 AGATTCCCTCATATACACATCCAGTT 59.440 38.462 0.00 0.00 0.00 3.16
2354 2449 6.575244 TTCCCTCATATACACATCCAGTTT 57.425 37.500 0.00 0.00 0.00 2.66
2355 2450 6.575244 TCCCTCATATACACATCCAGTTTT 57.425 37.500 0.00 0.00 0.00 2.43
2356 2451 6.356556 TCCCTCATATACACATCCAGTTTTG 58.643 40.000 0.00 0.00 0.00 2.44
2357 2452 5.009010 CCCTCATATACACATCCAGTTTTGC 59.991 44.000 0.00 0.00 0.00 3.68
2358 2453 5.589855 CCTCATATACACATCCAGTTTTGCA 59.410 40.000 0.00 0.00 0.00 4.08
2359 2454 6.263842 CCTCATATACACATCCAGTTTTGCAT 59.736 38.462 0.00 0.00 0.00 3.96
2360 2455 7.263100 TCATATACACATCCAGTTTTGCATC 57.737 36.000 0.00 0.00 0.00 3.91
2361 2456 6.827762 TCATATACACATCCAGTTTTGCATCA 59.172 34.615 0.00 0.00 0.00 3.07
2362 2457 3.928727 ACACATCCAGTTTTGCATCAG 57.071 42.857 0.00 0.00 0.00 2.90
2363 2458 3.489355 ACACATCCAGTTTTGCATCAGA 58.511 40.909 0.00 0.00 0.00 3.27
2364 2459 3.890756 ACACATCCAGTTTTGCATCAGAA 59.109 39.130 0.00 0.00 0.00 3.02
2365 2460 4.232221 CACATCCAGTTTTGCATCAGAAC 58.768 43.478 0.00 0.00 0.00 3.01
2366 2461 3.058016 ACATCCAGTTTTGCATCAGAACG 60.058 43.478 0.00 0.00 34.34 3.95
2367 2462 2.571212 TCCAGTTTTGCATCAGAACGT 58.429 42.857 0.00 0.00 34.34 3.99
2368 2463 2.548057 TCCAGTTTTGCATCAGAACGTC 59.452 45.455 0.00 0.00 34.34 4.34
2369 2464 2.549754 CCAGTTTTGCATCAGAACGTCT 59.450 45.455 0.00 0.00 34.34 4.18
2370 2465 3.745975 CCAGTTTTGCATCAGAACGTCTA 59.254 43.478 0.00 0.00 34.34 2.59
2371 2466 4.393062 CCAGTTTTGCATCAGAACGTCTAT 59.607 41.667 0.00 0.00 34.34 1.98
2372 2467 5.580691 CCAGTTTTGCATCAGAACGTCTATA 59.419 40.000 0.00 0.00 34.34 1.31
2373 2468 6.258727 CCAGTTTTGCATCAGAACGTCTATAT 59.741 38.462 0.00 0.00 34.34 0.86
2374 2469 7.438160 CCAGTTTTGCATCAGAACGTCTATATA 59.562 37.037 0.00 0.00 34.34 0.86
2375 2470 8.269424 CAGTTTTGCATCAGAACGTCTATATAC 58.731 37.037 0.00 0.00 34.34 1.47
2376 2471 7.979537 AGTTTTGCATCAGAACGTCTATATACA 59.020 33.333 0.00 0.00 34.34 2.29
2377 2472 7.694388 TTTGCATCAGAACGTCTATATACAC 57.306 36.000 0.00 0.00 0.00 2.90
2378 2473 5.449304 TGCATCAGAACGTCTATATACACG 58.551 41.667 8.75 8.75 41.90 4.49
2379 2474 4.852104 GCATCAGAACGTCTATATACACGG 59.148 45.833 13.95 0.00 40.43 4.94
2380 2475 5.334646 GCATCAGAACGTCTATATACACGGA 60.335 44.000 13.95 3.36 40.43 4.69
2381 2476 5.663795 TCAGAACGTCTATATACACGGAC 57.336 43.478 13.95 7.89 40.43 4.79
2382 2477 4.512944 TCAGAACGTCTATATACACGGACC 59.487 45.833 13.95 4.02 40.43 4.46
2383 2478 4.274214 CAGAACGTCTATATACACGGACCA 59.726 45.833 13.95 0.00 40.43 4.02
2384 2479 5.048921 CAGAACGTCTATATACACGGACCAT 60.049 44.000 13.95 0.00 40.43 3.55
2385 2480 4.761235 ACGTCTATATACACGGACCATG 57.239 45.455 13.95 0.00 40.43 3.66
2386 2481 4.392047 ACGTCTATATACACGGACCATGA 58.608 43.478 13.95 0.00 40.43 3.07
2387 2482 4.214971 ACGTCTATATACACGGACCATGAC 59.785 45.833 13.95 0.00 40.43 3.06
2388 2483 4.214758 CGTCTATATACACGGACCATGACA 59.785 45.833 0.00 0.00 32.19 3.58
2389 2484 5.617087 CGTCTATATACACGGACCATGACAG 60.617 48.000 0.00 0.00 32.19 3.51
2390 2485 4.765339 TCTATATACACGGACCATGACAGG 59.235 45.833 0.00 0.00 0.00 4.00
2391 2486 1.568504 ATACACGGACCATGACAGGT 58.431 50.000 0.00 0.00 46.82 4.00
2392 2487 0.606096 TACACGGACCATGACAGGTG 59.394 55.000 0.00 0.00 43.38 4.00
2393 2488 1.375908 CACGGACCATGACAGGTGG 60.376 63.158 0.00 0.00 43.38 4.61
2394 2489 2.268920 CGGACCATGACAGGTGGG 59.731 66.667 0.00 0.00 43.38 4.61
2395 2490 2.044946 GGACCATGACAGGTGGGC 60.045 66.667 0.00 0.00 43.38 5.36
2396 2491 2.044946 GACCATGACAGGTGGGCC 60.045 66.667 0.00 0.00 43.38 5.80
2397 2492 2.858476 ACCATGACAGGTGGGCCA 60.858 61.111 0.00 0.00 41.30 5.36
2398 2493 2.215451 GACCATGACAGGTGGGCCAT 62.215 60.000 10.70 0.00 43.38 4.40
2399 2494 1.000739 CCATGACAGGTGGGCCATT 59.999 57.895 10.70 0.00 37.19 3.16
2400 2495 1.324740 CCATGACAGGTGGGCCATTG 61.325 60.000 10.70 14.51 37.19 2.82
2401 2496 1.683365 ATGACAGGTGGGCCATTGC 60.683 57.895 10.70 8.69 37.19 3.56
2402 2497 2.036256 GACAGGTGGGCCATTGCT 59.964 61.111 10.70 2.85 37.74 3.91
2403 2498 2.283388 ACAGGTGGGCCATTGCTG 60.283 61.111 10.70 0.21 37.74 4.41
2404 2499 3.072468 CAGGTGGGCCATTGCTGG 61.072 66.667 10.70 0.00 46.17 4.85
2405 2500 4.387343 AGGTGGGCCATTGCTGGG 62.387 66.667 10.70 0.00 43.36 4.45
2406 2501 4.380945 GGTGGGCCATTGCTGGGA 62.381 66.667 10.70 0.00 43.36 4.37
2407 2502 2.757099 GTGGGCCATTGCTGGGAG 60.757 66.667 10.70 0.00 43.36 4.30
2408 2503 2.940467 TGGGCCATTGCTGGGAGA 60.940 61.111 0.00 0.00 43.36 3.71
2409 2504 2.123982 GGGCCATTGCTGGGAGAG 60.124 66.667 4.39 0.00 43.36 3.20
2410 2505 2.123982 GGCCATTGCTGGGAGAGG 60.124 66.667 0.00 0.00 43.36 3.69
2411 2506 2.683465 GGCCATTGCTGGGAGAGGA 61.683 63.158 0.00 0.00 43.36 3.71
2412 2507 1.304282 GCCATTGCTGGGAGAGGAA 59.696 57.895 0.00 0.00 43.36 3.36
2413 2508 0.323725 GCCATTGCTGGGAGAGGAAA 60.324 55.000 0.00 0.00 43.36 3.13
2414 2509 1.892329 GCCATTGCTGGGAGAGGAAAA 60.892 52.381 0.00 0.00 43.36 2.29
2415 2510 2.528564 CCATTGCTGGGAGAGGAAAAA 58.471 47.619 0.00 0.00 39.04 1.94
2436 2531 7.516198 AAAAATCATGACTACAGCTGAGTTT 57.484 32.000 23.35 4.26 35.97 2.66
2437 2532 8.621532 AAAAATCATGACTACAGCTGAGTTTA 57.378 30.769 23.35 12.35 34.51 2.01
2438 2533 7.840342 AAATCATGACTACAGCTGAGTTTAG 57.160 36.000 23.35 13.92 0.00 1.85
2439 2534 6.782082 ATCATGACTACAGCTGAGTTTAGA 57.218 37.500 23.35 16.09 0.00 2.10
2440 2535 5.955488 TCATGACTACAGCTGAGTTTAGAC 58.045 41.667 23.35 12.11 0.00 2.59
2441 2536 5.476945 TCATGACTACAGCTGAGTTTAGACA 59.523 40.000 23.35 17.19 0.00 3.41
2442 2537 5.784578 TGACTACAGCTGAGTTTAGACAA 57.215 39.130 23.35 0.53 0.00 3.18
2443 2538 5.529791 TGACTACAGCTGAGTTTAGACAAC 58.470 41.667 23.35 5.73 0.00 3.32
2444 2539 4.547532 ACTACAGCTGAGTTTAGACAACG 58.452 43.478 23.35 0.00 0.00 4.10
2445 2540 2.135933 ACAGCTGAGTTTAGACAACGC 58.864 47.619 23.35 0.00 0.00 4.84
2446 2541 1.461127 CAGCTGAGTTTAGACAACGCC 59.539 52.381 8.42 0.00 0.00 5.68
2447 2542 1.344763 AGCTGAGTTTAGACAACGCCT 59.655 47.619 0.00 0.00 0.00 5.52
2448 2543 2.143925 GCTGAGTTTAGACAACGCCTT 58.856 47.619 0.00 0.00 0.00 4.35
2449 2544 2.157863 GCTGAGTTTAGACAACGCCTTC 59.842 50.000 0.00 0.00 0.00 3.46
2450 2545 3.390135 CTGAGTTTAGACAACGCCTTCA 58.610 45.455 0.00 0.00 0.00 3.02
2451 2546 3.128349 TGAGTTTAGACAACGCCTTCAC 58.872 45.455 0.00 0.00 0.00 3.18
2452 2547 3.128349 GAGTTTAGACAACGCCTTCACA 58.872 45.455 0.00 0.00 0.00 3.58
2453 2548 3.740115 AGTTTAGACAACGCCTTCACAT 58.260 40.909 0.00 0.00 0.00 3.21
2454 2549 4.134563 AGTTTAGACAACGCCTTCACATT 58.865 39.130 0.00 0.00 0.00 2.71
2455 2550 4.024048 AGTTTAGACAACGCCTTCACATTG 60.024 41.667 0.00 0.00 0.00 2.82
2456 2551 1.967319 AGACAACGCCTTCACATTGT 58.033 45.000 0.00 0.00 37.97 2.71
2457 2552 2.316119 GACAACGCCTTCACATTGTC 57.684 50.000 0.65 0.65 42.85 3.18
2458 2553 0.951558 ACAACGCCTTCACATTGTCC 59.048 50.000 0.00 0.00 29.30 4.02
2459 2554 0.950836 CAACGCCTTCACATTGTCCA 59.049 50.000 0.00 0.00 0.00 4.02
2460 2555 1.069022 CAACGCCTTCACATTGTCCAG 60.069 52.381 0.00 0.00 0.00 3.86
2461 2556 0.606401 ACGCCTTCACATTGTCCAGG 60.606 55.000 6.46 6.46 0.00 4.45
2462 2557 1.885871 GCCTTCACATTGTCCAGGC 59.114 57.895 16.47 16.47 43.26 4.85
2463 2558 1.926511 GCCTTCACATTGTCCAGGCG 61.927 60.000 16.47 0.00 40.74 5.52
2464 2559 0.606401 CCTTCACATTGTCCAGGCGT 60.606 55.000 0.00 0.00 0.00 5.68
2465 2560 0.518636 CTTCACATTGTCCAGGCGTG 59.481 55.000 0.00 0.00 0.00 5.34
2466 2561 0.888736 TTCACATTGTCCAGGCGTGG 60.889 55.000 19.57 19.57 46.63 4.94
2473 2568 3.156714 TCCAGGCGTGGACATTGT 58.843 55.556 23.92 0.00 46.77 2.71
2474 2569 1.003839 TCCAGGCGTGGACATTGTC 60.004 57.895 23.92 8.34 46.77 3.18
2475 2570 2.779951 TCCAGGCGTGGACATTGTCG 62.780 60.000 23.92 1.59 46.77 4.35
2476 2571 1.374125 CAGGCGTGGACATTGTCGA 60.374 57.895 10.56 3.99 32.65 4.20
2477 2572 1.079819 AGGCGTGGACATTGTCGAG 60.080 57.895 10.56 5.72 32.65 4.04
2478 2573 2.100631 GGCGTGGACATTGTCGAGG 61.101 63.158 14.72 14.72 32.65 4.63
2479 2574 1.374252 GCGTGGACATTGTCGAGGT 60.374 57.895 18.51 0.00 32.65 3.85
2480 2575 1.352156 GCGTGGACATTGTCGAGGTC 61.352 60.000 18.51 10.16 38.31 3.85
2481 2576 1.071019 CGTGGACATTGTCGAGGTCG 61.071 60.000 10.56 3.71 39.90 4.79
2494 2589 3.552875 TCGAGGTCGATTTAGAGGATGT 58.447 45.455 0.00 0.00 44.22 3.06
2495 2590 3.315470 TCGAGGTCGATTTAGAGGATGTG 59.685 47.826 0.00 0.00 44.22 3.21
2496 2591 3.066900 CGAGGTCGATTTAGAGGATGTGT 59.933 47.826 0.00 0.00 43.02 3.72
2497 2592 4.275196 CGAGGTCGATTTAGAGGATGTGTA 59.725 45.833 0.00 0.00 43.02 2.90
2498 2593 5.048643 CGAGGTCGATTTAGAGGATGTGTAT 60.049 44.000 0.00 0.00 43.02 2.29
2499 2594 6.148976 CGAGGTCGATTTAGAGGATGTGTATA 59.851 42.308 0.00 0.00 43.02 1.47
2500 2595 7.148222 CGAGGTCGATTTAGAGGATGTGTATAT 60.148 40.741 0.00 0.00 43.02 0.86
2501 2596 8.423906 AGGTCGATTTAGAGGATGTGTATATT 57.576 34.615 0.00 0.00 0.00 1.28
2502 2597 8.871125 AGGTCGATTTAGAGGATGTGTATATTT 58.129 33.333 0.00 0.00 0.00 1.40
2503 2598 8.926710 GGTCGATTTAGAGGATGTGTATATTTG 58.073 37.037 0.00 0.00 0.00 2.32
2504 2599 8.926710 GTCGATTTAGAGGATGTGTATATTTGG 58.073 37.037 0.00 0.00 0.00 3.28
2505 2600 8.866093 TCGATTTAGAGGATGTGTATATTTGGA 58.134 33.333 0.00 0.00 0.00 3.53
2506 2601 8.926710 CGATTTAGAGGATGTGTATATTTGGAC 58.073 37.037 0.00 0.00 0.00 4.02
2507 2602 8.833231 ATTTAGAGGATGTGTATATTTGGACG 57.167 34.615 0.00 0.00 0.00 4.79
2508 2603 7.591421 TTAGAGGATGTGTATATTTGGACGA 57.409 36.000 0.00 0.00 0.00 4.20
2509 2604 5.844004 AGAGGATGTGTATATTTGGACGAC 58.156 41.667 0.00 0.00 0.00 4.34
2510 2605 4.957296 AGGATGTGTATATTTGGACGACC 58.043 43.478 0.00 0.00 0.00 4.79
2511 2606 4.407621 AGGATGTGTATATTTGGACGACCA 59.592 41.667 1.37 1.37 45.34 4.02
2512 2607 5.071788 AGGATGTGTATATTTGGACGACCAT 59.928 40.000 7.61 0.00 46.34 3.55
2513 2608 6.269077 AGGATGTGTATATTTGGACGACCATA 59.731 38.462 7.61 3.12 46.34 2.74
2514 2609 7.038302 AGGATGTGTATATTTGGACGACCATAT 60.038 37.037 7.61 11.10 46.34 1.78
2515 2610 8.255206 GGATGTGTATATTTGGACGACCATATA 58.745 37.037 16.40 16.40 46.34 0.86
2516 2611 9.302345 GATGTGTATATTTGGACGACCATATAG 57.698 37.037 18.22 0.00 46.34 1.31
2517 2612 8.411991 TGTGTATATTTGGACGACCATATAGA 57.588 34.615 18.22 13.12 46.34 1.98
2518 2613 8.301720 TGTGTATATTTGGACGACCATATAGAC 58.698 37.037 23.98 23.98 44.55 2.59
2521 2616 9.355215 GTATATTTGGACGACCATATAGACAAG 57.645 37.037 24.99 0.00 44.16 3.16
2522 2617 3.728076 TGGACGACCATATAGACAAGC 57.272 47.619 1.37 0.00 41.77 4.01
2523 2618 3.296854 TGGACGACCATATAGACAAGCT 58.703 45.455 1.37 0.00 41.77 3.74
2524 2619 3.068165 TGGACGACCATATAGACAAGCTG 59.932 47.826 1.37 0.00 41.77 4.24
2525 2620 3.068307 GGACGACCATATAGACAAGCTGT 59.932 47.826 0.00 0.00 35.97 4.40
2526 2621 4.441634 GGACGACCATATAGACAAGCTGTT 60.442 45.833 0.00 0.00 35.97 3.16
2527 2622 4.433615 ACGACCATATAGACAAGCTGTTG 58.566 43.478 0.00 0.00 39.82 3.33
2528 2623 3.804325 CGACCATATAGACAAGCTGTTGG 59.196 47.826 0.00 0.00 38.07 3.77
2529 2624 4.441495 CGACCATATAGACAAGCTGTTGGA 60.441 45.833 9.51 0.00 38.07 3.53
2530 2625 4.770795 ACCATATAGACAAGCTGTTGGAC 58.229 43.478 9.51 0.00 38.07 4.02
2531 2626 3.804325 CCATATAGACAAGCTGTTGGACG 59.196 47.826 0.00 0.00 38.07 4.79
2532 2627 4.433615 CATATAGACAAGCTGTTGGACGT 58.566 43.478 0.00 0.00 38.07 4.34
2533 2628 2.433868 TAGACAAGCTGTTGGACGTC 57.566 50.000 7.13 7.13 38.07 4.34
2534 2629 0.753262 AGACAAGCTGTTGGACGTCT 59.247 50.000 16.46 0.00 38.07 4.18
2535 2630 0.861837 GACAAGCTGTTGGACGTCTG 59.138 55.000 16.46 5.56 38.07 3.51
2536 2631 0.178068 ACAAGCTGTTGGACGTCTGT 59.822 50.000 16.46 6.25 38.07 3.41
2537 2632 1.299541 CAAGCTGTTGGACGTCTGTT 58.700 50.000 16.46 0.00 0.00 3.16
2538 2633 1.670811 CAAGCTGTTGGACGTCTGTTT 59.329 47.619 16.46 2.94 0.00 2.83
2539 2634 2.038387 AGCTGTTGGACGTCTGTTTT 57.962 45.000 16.46 0.00 0.00 2.43
2540 2635 1.670811 AGCTGTTGGACGTCTGTTTTG 59.329 47.619 16.46 3.34 0.00 2.44
2541 2636 1.268539 GCTGTTGGACGTCTGTTTTGG 60.269 52.381 16.46 1.78 0.00 3.28
2542 2637 1.333619 CTGTTGGACGTCTGTTTTGGG 59.666 52.381 16.46 0.00 0.00 4.12
2543 2638 0.030235 GTTGGACGTCTGTTTTGGGC 59.970 55.000 16.46 0.00 0.00 5.36
2544 2639 0.106918 TTGGACGTCTGTTTTGGGCT 60.107 50.000 16.46 0.00 0.00 5.19
2545 2640 0.534203 TGGACGTCTGTTTTGGGCTC 60.534 55.000 16.46 0.00 0.00 4.70
2546 2641 0.534203 GGACGTCTGTTTTGGGCTCA 60.534 55.000 16.46 0.00 0.00 4.26
2547 2642 0.586802 GACGTCTGTTTTGGGCTCAC 59.413 55.000 8.70 0.00 0.00 3.51
2548 2643 1.157870 ACGTCTGTTTTGGGCTCACG 61.158 55.000 0.00 0.00 0.00 4.35
2549 2644 1.157870 CGTCTGTTTTGGGCTCACGT 61.158 55.000 0.00 0.00 0.00 4.49
2550 2645 0.586802 GTCTGTTTTGGGCTCACGTC 59.413 55.000 0.00 0.00 0.00 4.34
2551 2646 0.878523 TCTGTTTTGGGCTCACGTCG 60.879 55.000 0.00 0.00 0.00 5.12
2552 2647 1.153329 TGTTTTGGGCTCACGTCGT 60.153 52.632 0.00 0.00 0.00 4.34
2553 2648 1.278637 GTTTTGGGCTCACGTCGTG 59.721 57.895 19.38 19.38 34.45 4.35
2554 2649 1.890041 TTTTGGGCTCACGTCGTGG 60.890 57.895 24.33 15.88 33.87 4.94
2555 2650 2.313051 TTTTGGGCTCACGTCGTGGA 62.313 55.000 24.33 10.80 33.87 4.02
2556 2651 2.313051 TTTGGGCTCACGTCGTGGAA 62.313 55.000 24.33 6.07 33.87 3.53
2557 2652 2.029964 GGGCTCACGTCGTGGAAA 59.970 61.111 24.33 5.33 33.87 3.13
2558 2653 1.595929 GGGCTCACGTCGTGGAAAA 60.596 57.895 24.33 4.95 33.87 2.29
2559 2654 1.568025 GGCTCACGTCGTGGAAAAC 59.432 57.895 24.33 9.86 33.87 2.43
2574 2669 5.657474 GTGGAAAACGAGTATAGACATCCA 58.343 41.667 0.00 0.00 32.33 3.41
2575 2670 6.281405 GTGGAAAACGAGTATAGACATCCAT 58.719 40.000 0.00 0.00 36.86 3.41
2576 2671 7.431249 GTGGAAAACGAGTATAGACATCCATA 58.569 38.462 0.00 0.00 36.86 2.74
2577 2672 8.088981 GTGGAAAACGAGTATAGACATCCATAT 58.911 37.037 0.00 0.00 36.86 1.78
2578 2673 9.304335 TGGAAAACGAGTATAGACATCCATATA 57.696 33.333 0.00 0.00 29.93 0.86
2579 2674 9.790389 GGAAAACGAGTATAGACATCCATATAG 57.210 37.037 0.00 0.00 0.00 1.31
2582 2677 9.516546 AAACGAGTATAGACATCCATATAGACA 57.483 33.333 0.00 0.00 0.00 3.41
2583 2678 9.516546 AACGAGTATAGACATCCATATAGACAA 57.483 33.333 0.00 0.00 0.00 3.18
2584 2679 9.168451 ACGAGTATAGACATCCATATAGACAAG 57.832 37.037 0.00 0.00 0.00 3.16
2585 2680 8.126074 CGAGTATAGACATCCATATAGACAAGC 58.874 40.741 0.00 0.00 0.00 4.01
2586 2681 9.184523 GAGTATAGACATCCATATAGACAAGCT 57.815 37.037 0.00 0.00 0.00 3.74
2591 2686 7.619050 AGACATCCATATAGACAAGCTATTGG 58.381 38.462 0.00 0.00 40.30 3.16
2592 2687 7.455953 AGACATCCATATAGACAAGCTATTGGA 59.544 37.037 13.58 13.58 43.21 3.53
2593 2688 7.619050 ACATCCATATAGACAAGCTATTGGAG 58.381 38.462 15.14 11.78 42.82 3.86
2594 2689 7.455953 ACATCCATATAGACAAGCTATTGGAGA 59.544 37.037 15.14 0.00 42.82 3.71
2595 2690 8.484575 CATCCATATAGACAAGCTATTGGAGAT 58.515 37.037 15.14 0.00 42.82 2.75
2596 2691 7.845037 TCCATATAGACAAGCTATTGGAGATG 58.155 38.462 0.00 0.00 39.33 2.90
2597 2692 6.538021 CCATATAGACAAGCTATTGGAGATGC 59.462 42.308 0.00 0.00 40.30 3.91
2598 2693 5.822132 ATAGACAAGCTATTGGAGATGCT 57.178 39.130 0.00 0.00 40.97 3.79
2599 2694 4.070630 AGACAAGCTATTGGAGATGCTC 57.929 45.455 0.00 0.00 40.97 4.26
2708 2803 4.833478 ATCATAGCTCCTGAAAGTGTGT 57.167 40.909 0.00 0.00 0.00 3.72
2830 2925 5.001232 TGACTGATTTGCCCTGTAGTTTAC 58.999 41.667 0.00 0.00 0.00 2.01
2903 2998 7.823799 TGTGCTTCTATATTTGAGTTGTGATGA 59.176 33.333 0.00 0.00 0.00 2.92
3081 3176 4.895668 TTTAGCCGGAGAGTTTCCTTTA 57.104 40.909 5.05 0.00 44.41 1.85
3158 3253 4.272018 AGAAACAGCTGCGTGAATATCATC 59.728 41.667 15.27 0.00 0.00 2.92
3478 3579 2.481441 TGTATGCCAGGATTCTCACCT 58.519 47.619 0.00 0.00 38.40 4.00
3853 3954 3.412386 AGTTGATGGCCTTGTCAGTTAC 58.588 45.455 3.32 1.79 0.00 2.50
3869 3970 8.631480 TGTCAGTTACTCTTGAGTAGTTATGA 57.369 34.615 9.96 9.90 0.00 2.15
4048 4150 3.935828 GACCAGTAGTTCAATCAGGCTTC 59.064 47.826 0.00 0.00 0.00 3.86
4143 4245 6.942576 CCTCCGTCCCAAAATATAAGATCATT 59.057 38.462 0.00 0.00 0.00 2.57
4484 4617 1.305201 AAGGTGTGTTACAGTTGCCG 58.695 50.000 0.00 0.00 0.00 5.69
4921 5055 4.393990 TGCATCTTCTACTCAGTGCATTTG 59.606 41.667 0.00 0.00 37.63 2.32
5079 5215 1.331756 CAACACAGTGCTCTTCGCTTT 59.668 47.619 0.00 0.00 40.11 3.51
5115 5251 4.006319 ACCTGCTGCTCTTGAATAAAGAC 58.994 43.478 0.00 0.00 40.09 3.01
5118 5254 4.005650 TGCTGCTCTTGAATAAAGACTGG 58.994 43.478 0.00 0.00 40.09 4.00
5307 5443 3.615224 TCATGCACTGTTGATGAGCTA 57.385 42.857 0.00 0.00 0.00 3.32
5358 5494 0.036010 TAGTGCTTCAGCCTCAAGCC 60.036 55.000 0.00 0.00 44.90 4.35
5366 5502 0.825010 CAGCCTCAAGCCAACCACTT 60.825 55.000 0.00 0.00 45.47 3.16
5373 5509 1.955778 CAAGCCAACCACTTCATGTCA 59.044 47.619 0.00 0.00 0.00 3.58
5476 5613 7.661968 ACGTGAGCAGTATATGACATATTTCT 58.338 34.615 13.09 9.42 0.00 2.52
5490 5627 8.824756 TGACATATTTCTAGTACCTCTGTTCT 57.175 34.615 0.00 0.00 0.00 3.01
5521 5658 5.789643 TTTCTCAAGCTAACTTTGCCATT 57.210 34.783 0.00 0.00 32.29 3.16
5898 6035 3.626729 CCAATCCTCTGGGAATTCTGCTT 60.627 47.826 5.23 0.00 45.78 3.91
5948 6085 6.200665 TGACATTGTTTGTTATCTTTTGCTGC 59.799 34.615 0.00 0.00 39.18 5.25
5988 6126 6.763610 GCTTTGCATCTATAGTAAAGTGGAGT 59.236 38.462 15.71 0.00 32.47 3.85
6043 6181 5.911178 TCCCTCACATGATAAATACTCCCTT 59.089 40.000 0.00 0.00 0.00 3.95
6046 6184 6.463049 CCTCACATGATAAATACTCCCTTCGT 60.463 42.308 0.00 0.00 0.00 3.85
6048 6186 6.323996 TCACATGATAAATACTCCCTTCGTCT 59.676 38.462 0.00 0.00 0.00 4.18
6061 6199 6.380274 ACTCCCTTCGTCTCATAATGTAAGAA 59.620 38.462 0.00 0.00 0.00 2.52
6121 6267 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
6194 6340 1.202313 GCTAGGTCGAGTCGCATCTTT 60.202 52.381 7.92 0.00 0.00 2.52
6198 6344 2.753452 AGGTCGAGTCGCATCTTTTCTA 59.247 45.455 7.92 0.00 0.00 2.10
6200 6346 4.113354 GGTCGAGTCGCATCTTTTCTATT 58.887 43.478 7.92 0.00 0.00 1.73
6201 6347 5.067413 AGGTCGAGTCGCATCTTTTCTATTA 59.933 40.000 7.92 0.00 0.00 0.98
6203 6349 5.742453 GTCGAGTCGCATCTTTTCTATTACA 59.258 40.000 7.92 0.00 0.00 2.41
6204 6350 5.971792 TCGAGTCGCATCTTTTCTATTACAG 59.028 40.000 7.92 0.00 0.00 2.74
6294 6442 8.370940 TGTTAACCATAAAAATTGATGGCTGAA 58.629 29.630 9.13 0.00 45.63 3.02
6333 6533 6.453265 CGAGATTGAGTTGTTTTATTACGCGA 60.453 38.462 15.93 0.00 0.00 5.87
6346 6546 4.875544 ATTACGCGAAAGTATTGCACAT 57.124 36.364 15.93 0.00 0.00 3.21
6372 6572 8.258007 TGGACACTTGAGGTAATATTCTTACTG 58.742 37.037 0.00 0.00 0.00 2.74
6392 6592 9.109393 CTTACTGCTAATTTTTATGCCTGTCTA 57.891 33.333 0.00 0.00 0.00 2.59
6396 6596 9.807649 CTGCTAATTTTTATGCCTGTCTAAATT 57.192 29.630 0.00 0.00 0.00 1.82
6403 6603 7.859325 TTTATGCCTGTCTAAATTACACTCC 57.141 36.000 0.00 0.00 0.00 3.85
6404 6604 4.901197 TGCCTGTCTAAATTACACTCCA 57.099 40.909 0.00 0.00 0.00 3.86
6405 6605 5.435686 TGCCTGTCTAAATTACACTCCAT 57.564 39.130 0.00 0.00 0.00 3.41
6406 6606 5.428253 TGCCTGTCTAAATTACACTCCATC 58.572 41.667 0.00 0.00 0.00 3.51
6407 6607 4.816925 GCCTGTCTAAATTACACTCCATCC 59.183 45.833 0.00 0.00 0.00 3.51
6408 6608 5.050490 CCTGTCTAAATTACACTCCATCCG 58.950 45.833 0.00 0.00 0.00 4.18
6409 6609 5.395324 CCTGTCTAAATTACACTCCATCCGT 60.395 44.000 0.00 0.00 0.00 4.69
6410 6610 6.045072 TGTCTAAATTACACTCCATCCGTT 57.955 37.500 0.00 0.00 0.00 4.44
6411 6611 6.103997 TGTCTAAATTACACTCCATCCGTTC 58.896 40.000 0.00 0.00 0.00 3.95
6412 6612 6.070995 TGTCTAAATTACACTCCATCCGTTCT 60.071 38.462 0.00 0.00 0.00 3.01
6413 6613 7.123098 TGTCTAAATTACACTCCATCCGTTCTA 59.877 37.037 0.00 0.00 0.00 2.10
6414 6614 7.977853 GTCTAAATTACACTCCATCCGTTCTAA 59.022 37.037 0.00 0.00 0.00 2.10
6415 6615 8.533657 TCTAAATTACACTCCATCCGTTCTAAA 58.466 33.333 0.00 0.00 0.00 1.85
6416 6616 7.989416 AAATTACACTCCATCCGTTCTAAAA 57.011 32.000 0.00 0.00 0.00 1.52
6417 6617 8.575649 AAATTACACTCCATCCGTTCTAAAAT 57.424 30.769 0.00 0.00 0.00 1.82
6418 6618 9.675464 AAATTACACTCCATCCGTTCTAAAATA 57.325 29.630 0.00 0.00 0.00 1.40
6419 6619 8.888579 ATTACACTCCATCCGTTCTAAAATAG 57.111 34.615 0.00 0.00 0.00 1.73
6420 6620 6.540438 ACACTCCATCCGTTCTAAAATAGA 57.460 37.500 0.00 0.00 0.00 1.98
6421 6621 7.125792 ACACTCCATCCGTTCTAAAATAGAT 57.874 36.000 0.00 0.00 34.22 1.98
6422 6622 6.986817 ACACTCCATCCGTTCTAAAATAGATG 59.013 38.462 0.00 0.00 34.22 2.90
6423 6623 7.147724 ACACTCCATCCGTTCTAAAATAGATGA 60.148 37.037 0.00 0.00 34.22 2.92
6424 6624 7.169982 CACTCCATCCGTTCTAAAATAGATGAC 59.830 40.741 0.00 0.00 34.22 3.06
6425 6625 6.522054 TCCATCCGTTCTAAAATAGATGACC 58.478 40.000 0.00 0.00 34.22 4.02
6426 6626 6.099125 TCCATCCGTTCTAAAATAGATGACCA 59.901 38.462 0.00 0.00 34.22 4.02
6427 6627 6.765989 CCATCCGTTCTAAAATAGATGACCAA 59.234 38.462 0.00 0.00 34.22 3.67
6428 6628 7.254795 CCATCCGTTCTAAAATAGATGACCAAC 60.255 40.741 0.00 0.00 34.22 3.77
6429 6629 6.942976 TCCGTTCTAAAATAGATGACCAACT 58.057 36.000 0.00 0.00 34.22 3.16
6430 6630 7.391620 TCCGTTCTAAAATAGATGACCAACTT 58.608 34.615 0.00 0.00 34.22 2.66
6431 6631 8.533657 TCCGTTCTAAAATAGATGACCAACTTA 58.466 33.333 0.00 0.00 34.22 2.24
6432 6632 8.818057 CCGTTCTAAAATAGATGACCAACTTAG 58.182 37.037 0.00 0.00 34.22 2.18
6433 6633 9.367444 CGTTCTAAAATAGATGACCAACTTAGT 57.633 33.333 0.00 0.00 34.22 2.24
6446 6646 8.767478 TGACCAACTTAGTACTAACTTTATGC 57.233 34.615 11.38 0.55 37.15 3.14
6447 6647 8.591072 TGACCAACTTAGTACTAACTTTATGCT 58.409 33.333 11.38 0.00 37.15 3.79
6485 6685 8.532977 AAGTTGAATCATTTATTTTGGAACGG 57.467 30.769 0.00 0.00 0.00 4.44
6486 6686 7.666623 AGTTGAATCATTTATTTTGGAACGGT 58.333 30.769 0.00 0.00 0.00 4.83
6487 6687 7.598493 AGTTGAATCATTTATTTTGGAACGGTG 59.402 33.333 0.00 0.00 0.00 4.94
6488 6688 6.393990 TGAATCATTTATTTTGGAACGGTGG 58.606 36.000 0.00 0.00 0.00 4.61
6489 6689 4.792521 TCATTTATTTTGGAACGGTGGG 57.207 40.909 0.00 0.00 0.00 4.61
6490 6690 4.408276 TCATTTATTTTGGAACGGTGGGA 58.592 39.130 0.00 0.00 0.00 4.37
6491 6691 4.461081 TCATTTATTTTGGAACGGTGGGAG 59.539 41.667 0.00 0.00 0.00 4.30
6492 6692 3.512219 TTATTTTGGAACGGTGGGAGT 57.488 42.857 0.00 0.00 0.00 3.85
6493 6693 4.637387 TTATTTTGGAACGGTGGGAGTA 57.363 40.909 0.00 0.00 0.00 2.59
6494 6694 2.259266 TTTTGGAACGGTGGGAGTAC 57.741 50.000 0.00 0.00 0.00 2.73
6495 6695 0.033781 TTTGGAACGGTGGGAGTACG 59.966 55.000 0.00 0.00 0.00 3.67
6496 6696 1.114722 TTGGAACGGTGGGAGTACGT 61.115 55.000 0.00 0.00 43.43 3.57
6497 6697 1.080298 GGAACGGTGGGAGTACGTG 60.080 63.158 0.00 0.00 41.12 4.49
6498 6698 1.080298 GAACGGTGGGAGTACGTGG 60.080 63.158 0.00 0.00 41.12 4.94
6499 6699 3.230522 AACGGTGGGAGTACGTGGC 62.231 63.158 0.00 0.00 41.12 5.01
6500 6700 3.687102 CGGTGGGAGTACGTGGCA 61.687 66.667 0.00 0.00 0.00 4.92
6501 6701 2.264794 GGTGGGAGTACGTGGCAG 59.735 66.667 0.00 0.00 0.00 4.85
6502 6702 2.580601 GGTGGGAGTACGTGGCAGT 61.581 63.158 0.00 0.00 0.00 4.40
6503 6703 1.374252 GTGGGAGTACGTGGCAGTG 60.374 63.158 0.00 0.00 0.00 3.66
6504 6704 2.264794 GGGAGTACGTGGCAGTGG 59.735 66.667 0.00 0.00 0.00 4.00
6505 6705 2.434359 GGAGTACGTGGCAGTGGC 60.434 66.667 10.30 10.30 40.13 5.01
6515 6715 2.436646 GCAGTGGCCACGCTATGT 60.437 61.111 31.90 14.82 35.22 2.29
6516 6716 2.040544 GCAGTGGCCACGCTATGTT 61.041 57.895 31.90 14.16 35.22 2.71
6517 6717 1.586154 GCAGTGGCCACGCTATGTTT 61.586 55.000 31.90 13.50 35.22 2.83
6518 6718 0.881118 CAGTGGCCACGCTATGTTTT 59.119 50.000 29.68 6.44 35.22 2.43
6519 6719 0.881118 AGTGGCCACGCTATGTTTTG 59.119 50.000 29.68 0.00 35.22 2.44
6520 6720 0.596082 GTGGCCACGCTATGTTTTGT 59.404 50.000 22.49 0.00 0.00 2.83
6521 6721 1.807742 GTGGCCACGCTATGTTTTGTA 59.192 47.619 22.49 0.00 0.00 2.41
6522 6722 2.226912 GTGGCCACGCTATGTTTTGTAA 59.773 45.455 22.49 0.00 0.00 2.41
6523 6723 2.486203 TGGCCACGCTATGTTTTGTAAG 59.514 45.455 0.00 0.00 0.00 2.34
6524 6724 2.486592 GGCCACGCTATGTTTTGTAAGT 59.513 45.455 0.00 0.00 0.00 2.24
6525 6725 3.425758 GGCCACGCTATGTTTTGTAAGTC 60.426 47.826 0.00 0.00 0.00 3.01
6526 6726 3.723835 GCCACGCTATGTTTTGTAAGTCG 60.724 47.826 0.00 0.00 0.00 4.18
6527 6727 3.404564 CACGCTATGTTTTGTAAGTCGC 58.595 45.455 0.00 0.00 0.00 5.19
6528 6728 3.061322 ACGCTATGTTTTGTAAGTCGCA 58.939 40.909 0.00 0.00 0.00 5.10
6529 6729 3.120786 ACGCTATGTTTTGTAAGTCGCAC 60.121 43.478 0.00 0.00 0.00 5.34
6530 6730 3.404564 GCTATGTTTTGTAAGTCGCACG 58.595 45.455 0.00 0.00 0.00 5.34
6531 6731 2.309898 ATGTTTTGTAAGTCGCACGC 57.690 45.000 0.00 0.00 0.00 5.34
6532 6732 1.007580 TGTTTTGTAAGTCGCACGCA 58.992 45.000 0.00 0.00 0.00 5.24
6533 6733 1.267632 TGTTTTGTAAGTCGCACGCAC 60.268 47.619 0.00 0.00 0.00 5.34
6534 6734 0.042880 TTTTGTAAGTCGCACGCACG 60.043 50.000 0.00 0.00 0.00 5.34
6535 6735 2.419100 TTTGTAAGTCGCACGCACGC 62.419 55.000 0.00 0.00 0.00 5.34
6546 6746 3.833271 CGCACGCGCACATTCGTA 61.833 61.111 5.73 0.00 37.14 3.43
6547 6747 2.275812 GCACGCGCACATTCGTAC 60.276 61.111 5.73 0.00 37.14 3.67
6548 6748 2.018137 CACGCGCACATTCGTACG 59.982 61.111 9.53 9.53 37.14 3.67
6549 6749 3.176578 ACGCGCACATTCGTACGG 61.177 61.111 16.52 1.50 37.14 4.02
6550 6750 4.553101 CGCGCACATTCGTACGGC 62.553 66.667 16.52 9.40 32.28 5.68
6551 6751 4.218478 GCGCACATTCGTACGGCC 62.218 66.667 16.52 0.00 32.28 6.13
6552 6752 2.811747 CGCACATTCGTACGGCCA 60.812 61.111 16.52 0.00 0.00 5.36
6553 6753 2.798501 CGCACATTCGTACGGCCAG 61.799 63.158 16.52 5.93 0.00 4.85
6554 6754 3.089784 CACATTCGTACGGCCAGC 58.910 61.111 16.52 0.00 0.00 4.85
6555 6755 2.125269 ACATTCGTACGGCCAGCC 60.125 61.111 16.52 0.00 0.00 4.85
6556 6756 2.895372 CATTCGTACGGCCAGCCC 60.895 66.667 16.52 0.00 0.00 5.19
6574 6774 2.743636 CCGTACTGGGCCATATAGTG 57.256 55.000 6.72 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 82 4.802051 GATTGGGCTGCGGGCTGA 62.802 66.667 19.72 8.20 41.46 4.26
73 84 4.133373 ATGATTGGGCTGCGGGCT 62.133 61.111 19.72 0.00 41.46 5.19
74 85 3.908081 CATGATTGGGCTGCGGGC 61.908 66.667 11.40 11.40 40.90 6.13
165 177 0.031994 CGTTTTGTTTCCCTGGCTGG 59.968 55.000 2.96 2.96 0.00 4.85
166 178 1.028905 TCGTTTTGTTTCCCTGGCTG 58.971 50.000 0.00 0.00 0.00 4.85
167 179 1.029681 GTCGTTTTGTTTCCCTGGCT 58.970 50.000 0.00 0.00 0.00 4.75
168 180 0.317519 CGTCGTTTTGTTTCCCTGGC 60.318 55.000 0.00 0.00 0.00 4.85
232 244 3.431725 CGGGCGGAAGGAAGCAAC 61.432 66.667 0.00 0.00 34.54 4.17
1141 1202 1.082104 GCAGAAAACAAGGGCGACG 60.082 57.895 0.00 0.00 0.00 5.12
1178 1242 1.124780 TCCGACCCAGTTCAGTTCAA 58.875 50.000 0.00 0.00 0.00 2.69
1194 1270 2.480555 GCCACGCACAGAAATCCG 59.519 61.111 0.00 0.00 0.00 4.18
1345 1421 6.703607 AGTGATATGCAATCTACAGTGCTTAC 59.296 38.462 0.00 0.00 41.48 2.34
1374 1452 7.923414 ATACAATCCTCAGAACAAAACCTAC 57.077 36.000 0.00 0.00 0.00 3.18
1419 1497 4.988598 AGAACCGCAGCACCCACG 62.989 66.667 0.00 0.00 0.00 4.94
1421 1499 2.410322 AATCAGAACCGCAGCACCCA 62.410 55.000 0.00 0.00 0.00 4.51
1536 1622 4.133820 ACAAGCAGCAGTACACAACAATA 58.866 39.130 0.00 0.00 0.00 1.90
1541 1635 2.323968 TGACAAGCAGCAGTACACAA 57.676 45.000 0.00 0.00 0.00 3.33
1664 1759 4.853196 CAGAGTTAAATTGTGGATGCAACG 59.147 41.667 0.00 0.00 0.00 4.10
1680 1775 8.194769 TGCATCGATAAGTATTGAACAGAGTTA 58.805 33.333 0.00 0.00 30.34 2.24
1769 1864 2.034685 TGAATATCTGAAGCGAGGGTCG 59.965 50.000 0.00 0.00 43.89 4.79
1918 2013 9.692749 CATATAGTAATACTCGTGAAACCATGT 57.307 33.333 0.00 0.00 0.00 3.21
2133 2228 0.478072 ACACAGGACAAAGGGCATCA 59.522 50.000 0.00 0.00 0.00 3.07
2135 2230 0.185901 ACACACAGGACAAAGGGCAT 59.814 50.000 0.00 0.00 0.00 4.40
2261 2356 5.163269 ACACATGCTATTGGAGATGCTCTAA 60.163 40.000 0.00 0.00 35.57 2.10
2262 2357 4.346127 ACACATGCTATTGGAGATGCTCTA 59.654 41.667 0.00 0.00 0.00 2.43
2263 2358 3.136077 ACACATGCTATTGGAGATGCTCT 59.864 43.478 0.00 0.00 0.00 4.09
2264 2359 3.474600 ACACATGCTATTGGAGATGCTC 58.525 45.455 0.00 0.00 0.00 4.26
2265 2360 3.572632 ACACATGCTATTGGAGATGCT 57.427 42.857 0.00 0.00 0.00 3.79
2266 2361 7.621428 AATATACACATGCTATTGGAGATGC 57.379 36.000 0.00 0.00 0.00 3.91
2267 2362 8.456471 CCAAATATACACATGCTATTGGAGATG 58.544 37.037 0.00 0.00 0.00 2.90
2268 2363 8.385491 TCCAAATATACACATGCTATTGGAGAT 58.615 33.333 0.00 0.00 0.00 2.75
2269 2364 7.744733 TCCAAATATACACATGCTATTGGAGA 58.255 34.615 0.00 0.00 0.00 3.71
2270 2365 7.984422 TCCAAATATACACATGCTATTGGAG 57.016 36.000 0.00 0.00 0.00 3.86
2271 2366 7.944000 ACATCCAAATATACACATGCTATTGGA 59.056 33.333 12.85 12.85 0.00 3.53
2272 2367 8.114331 ACATCCAAATATACACATGCTATTGG 57.886 34.615 0.00 0.00 0.00 3.16
2273 2368 9.006839 AGACATCCAAATATACACATGCTATTG 57.993 33.333 0.00 0.00 0.00 1.90
2313 2408 6.659242 TGAGGGAATCTTTTTAGACCATTGTC 59.341 38.462 0.00 0.00 42.09 3.18
2314 2409 6.552008 TGAGGGAATCTTTTTAGACCATTGT 58.448 36.000 0.00 0.00 0.00 2.71
2315 2410 7.651027 ATGAGGGAATCTTTTTAGACCATTG 57.349 36.000 0.00 0.00 0.00 2.82
2318 2413 8.998814 TGTATATGAGGGAATCTTTTTAGACCA 58.001 33.333 0.00 0.00 0.00 4.02
2319 2414 9.274206 GTGTATATGAGGGAATCTTTTTAGACC 57.726 37.037 0.00 0.00 0.00 3.85
2320 2415 9.832445 TGTGTATATGAGGGAATCTTTTTAGAC 57.168 33.333 0.00 0.00 0.00 2.59
2323 2418 9.793259 GGATGTGTATATGAGGGAATCTTTTTA 57.207 33.333 0.00 0.00 0.00 1.52
2324 2419 8.281531 TGGATGTGTATATGAGGGAATCTTTTT 58.718 33.333 0.00 0.00 0.00 1.94
2325 2420 7.815383 TGGATGTGTATATGAGGGAATCTTTT 58.185 34.615 0.00 0.00 0.00 2.27
2326 2421 7.072961 ACTGGATGTGTATATGAGGGAATCTTT 59.927 37.037 0.00 0.00 0.00 2.52
2327 2422 6.560304 ACTGGATGTGTATATGAGGGAATCTT 59.440 38.462 0.00 0.00 0.00 2.40
2328 2423 6.087456 ACTGGATGTGTATATGAGGGAATCT 58.913 40.000 0.00 0.00 0.00 2.40
2329 2424 6.365970 ACTGGATGTGTATATGAGGGAATC 57.634 41.667 0.00 0.00 0.00 2.52
2330 2425 6.770286 AACTGGATGTGTATATGAGGGAAT 57.230 37.500 0.00 0.00 0.00 3.01
2331 2426 6.575244 AAACTGGATGTGTATATGAGGGAA 57.425 37.500 0.00 0.00 0.00 3.97
2332 2427 6.356556 CAAAACTGGATGTGTATATGAGGGA 58.643 40.000 0.00 0.00 0.00 4.20
2333 2428 5.009010 GCAAAACTGGATGTGTATATGAGGG 59.991 44.000 0.00 0.00 0.00 4.30
2334 2429 5.589855 TGCAAAACTGGATGTGTATATGAGG 59.410 40.000 0.00 0.00 0.00 3.86
2335 2430 6.682423 TGCAAAACTGGATGTGTATATGAG 57.318 37.500 0.00 0.00 0.00 2.90
2336 2431 6.827762 TGATGCAAAACTGGATGTGTATATGA 59.172 34.615 0.00 0.00 0.00 2.15
2337 2432 7.012610 TCTGATGCAAAACTGGATGTGTATATG 59.987 37.037 0.00 0.00 0.00 1.78
2338 2433 7.056006 TCTGATGCAAAACTGGATGTGTATAT 58.944 34.615 0.00 0.00 0.00 0.86
2339 2434 6.413892 TCTGATGCAAAACTGGATGTGTATA 58.586 36.000 0.00 0.00 0.00 1.47
2340 2435 5.255687 TCTGATGCAAAACTGGATGTGTAT 58.744 37.500 0.00 0.00 0.00 2.29
2341 2436 4.650734 TCTGATGCAAAACTGGATGTGTA 58.349 39.130 0.00 0.00 0.00 2.90
2342 2437 3.489355 TCTGATGCAAAACTGGATGTGT 58.511 40.909 0.00 0.00 0.00 3.72
2343 2438 4.232221 GTTCTGATGCAAAACTGGATGTG 58.768 43.478 0.00 0.00 0.00 3.21
2344 2439 3.058016 CGTTCTGATGCAAAACTGGATGT 60.058 43.478 0.00 0.00 0.00 3.06
2345 2440 3.058016 ACGTTCTGATGCAAAACTGGATG 60.058 43.478 0.00 0.00 0.00 3.51
2346 2441 3.149196 ACGTTCTGATGCAAAACTGGAT 58.851 40.909 0.00 0.00 0.00 3.41
2347 2442 2.548057 GACGTTCTGATGCAAAACTGGA 59.452 45.455 0.00 0.00 0.00 3.86
2348 2443 2.549754 AGACGTTCTGATGCAAAACTGG 59.450 45.455 0.00 0.00 0.00 4.00
2349 2444 3.885484 AGACGTTCTGATGCAAAACTG 57.115 42.857 0.00 0.00 0.00 3.16
2350 2445 7.979537 TGTATATAGACGTTCTGATGCAAAACT 59.020 33.333 0.00 0.00 0.00 2.66
2351 2446 8.056571 GTGTATATAGACGTTCTGATGCAAAAC 58.943 37.037 0.00 0.00 0.00 2.43
2352 2447 7.043656 CGTGTATATAGACGTTCTGATGCAAAA 60.044 37.037 20.92 0.00 38.06 2.44
2353 2448 6.416750 CGTGTATATAGACGTTCTGATGCAAA 59.583 38.462 20.92 0.00 38.06 3.68
2354 2449 5.912955 CGTGTATATAGACGTTCTGATGCAA 59.087 40.000 20.92 0.00 38.06 4.08
2355 2450 5.449304 CGTGTATATAGACGTTCTGATGCA 58.551 41.667 20.92 0.00 38.06 3.96
2356 2451 4.852104 CCGTGTATATAGACGTTCTGATGC 59.148 45.833 25.32 0.00 40.81 3.91
2357 2452 6.078479 GTCCGTGTATATAGACGTTCTGATG 58.922 44.000 25.32 12.14 40.81 3.07
2358 2453 5.180868 GGTCCGTGTATATAGACGTTCTGAT 59.819 44.000 25.32 0.00 40.81 2.90
2359 2454 4.512944 GGTCCGTGTATATAGACGTTCTGA 59.487 45.833 25.32 15.33 40.81 3.27
2360 2455 4.274214 TGGTCCGTGTATATAGACGTTCTG 59.726 45.833 25.32 13.61 40.81 3.02
2361 2456 4.454678 TGGTCCGTGTATATAGACGTTCT 58.545 43.478 25.32 0.00 40.81 3.01
2362 2457 4.818534 TGGTCCGTGTATATAGACGTTC 57.181 45.455 25.32 18.32 40.81 3.95
2363 2458 4.823442 TCATGGTCCGTGTATATAGACGTT 59.177 41.667 25.32 7.24 40.81 3.99
2364 2459 4.214971 GTCATGGTCCGTGTATATAGACGT 59.785 45.833 25.32 8.71 40.81 4.34
2365 2460 4.214758 TGTCATGGTCCGTGTATATAGACG 59.785 45.833 21.94 21.94 41.88 4.18
2366 2461 5.335740 CCTGTCATGGTCCGTGTATATAGAC 60.336 48.000 10.97 0.00 0.00 2.59
2367 2462 4.765339 CCTGTCATGGTCCGTGTATATAGA 59.235 45.833 10.97 0.00 0.00 1.98
2368 2463 4.523173 ACCTGTCATGGTCCGTGTATATAG 59.477 45.833 10.97 0.19 34.86 1.31
2369 2464 4.279922 CACCTGTCATGGTCCGTGTATATA 59.720 45.833 10.97 0.00 38.45 0.86
2370 2465 3.069586 CACCTGTCATGGTCCGTGTATAT 59.930 47.826 10.97 0.00 38.45 0.86
2371 2466 2.429250 CACCTGTCATGGTCCGTGTATA 59.571 50.000 10.97 0.00 38.45 1.47
2372 2467 1.207089 CACCTGTCATGGTCCGTGTAT 59.793 52.381 10.97 0.00 38.45 2.29
2373 2468 0.606096 CACCTGTCATGGTCCGTGTA 59.394 55.000 10.97 1.38 38.45 2.90
2374 2469 1.371183 CACCTGTCATGGTCCGTGT 59.629 57.895 10.97 0.00 38.45 4.49
2375 2470 1.375908 CCACCTGTCATGGTCCGTG 60.376 63.158 4.52 4.52 38.45 4.94
2376 2471 2.592993 CCCACCTGTCATGGTCCGT 61.593 63.158 0.00 0.00 38.45 4.69
2377 2472 2.268920 CCCACCTGTCATGGTCCG 59.731 66.667 0.00 0.00 38.45 4.79
2378 2473 2.044946 GCCCACCTGTCATGGTCC 60.045 66.667 0.00 0.00 38.45 4.46
2379 2474 2.044946 GGCCCACCTGTCATGGTC 60.045 66.667 0.00 0.00 38.45 4.02
2380 2475 1.803453 AATGGCCCACCTGTCATGGT 61.803 55.000 0.00 0.00 41.77 3.55
2381 2476 1.000739 AATGGCCCACCTGTCATGG 59.999 57.895 0.00 0.00 36.63 3.66
2382 2477 1.952102 GCAATGGCCCACCTGTCATG 61.952 60.000 0.00 0.00 36.63 3.07
2383 2478 1.683365 GCAATGGCCCACCTGTCAT 60.683 57.895 0.00 0.00 36.63 3.06
2384 2479 2.283101 GCAATGGCCCACCTGTCA 60.283 61.111 0.00 0.00 36.63 3.58
2385 2480 2.036256 AGCAATGGCCCACCTGTC 59.964 61.111 0.00 0.00 42.56 3.51
2386 2481 2.283388 CAGCAATGGCCCACCTGT 60.283 61.111 0.00 0.00 42.56 4.00
2387 2482 3.072468 CCAGCAATGGCCCACCTG 61.072 66.667 0.00 1.23 42.56 4.00
2388 2483 4.387343 CCCAGCAATGGCCCACCT 62.387 66.667 0.00 0.00 42.56 4.00
2389 2484 4.380945 TCCCAGCAATGGCCCACC 62.381 66.667 0.00 0.00 42.56 4.61
2390 2485 2.757099 CTCCCAGCAATGGCCCAC 60.757 66.667 0.00 0.00 42.56 4.61
2391 2486 2.940467 TCTCCCAGCAATGGCCCA 60.940 61.111 0.00 0.00 42.56 5.36
2392 2487 2.123982 CTCTCCCAGCAATGGCCC 60.124 66.667 0.00 0.00 42.56 5.80
2393 2488 2.123982 CCTCTCCCAGCAATGGCC 60.124 66.667 0.00 0.00 42.56 5.36
2394 2489 0.323725 TTTCCTCTCCCAGCAATGGC 60.324 55.000 0.00 0.00 41.61 4.40
2395 2490 2.220653 TTTTCCTCTCCCAGCAATGG 57.779 50.000 0.00 0.00 0.00 3.16
2412 2507 7.516198 AAACTCAGCTGTAGTCATGATTTTT 57.484 32.000 14.67 2.42 0.00 1.94
2413 2508 8.097038 TCTAAACTCAGCTGTAGTCATGATTTT 58.903 33.333 14.67 7.71 31.87 1.82
2414 2509 7.547370 GTCTAAACTCAGCTGTAGTCATGATTT 59.453 37.037 14.67 8.32 0.00 2.17
2415 2510 7.038659 GTCTAAACTCAGCTGTAGTCATGATT 58.961 38.462 14.67 8.93 0.00 2.57
2416 2511 6.153510 TGTCTAAACTCAGCTGTAGTCATGAT 59.846 38.462 14.67 0.00 0.00 2.45
2417 2512 5.476945 TGTCTAAACTCAGCTGTAGTCATGA 59.523 40.000 14.67 10.86 0.00 3.07
2418 2513 5.714047 TGTCTAAACTCAGCTGTAGTCATG 58.286 41.667 14.67 9.05 0.00 3.07
2419 2514 5.984695 TGTCTAAACTCAGCTGTAGTCAT 57.015 39.130 14.67 10.60 0.00 3.06
2420 2515 5.529791 GTTGTCTAAACTCAGCTGTAGTCA 58.470 41.667 14.67 9.00 0.00 3.41
2421 2516 4.617645 CGTTGTCTAAACTCAGCTGTAGTC 59.382 45.833 14.67 6.51 0.00 2.59
2422 2517 4.547532 CGTTGTCTAAACTCAGCTGTAGT 58.452 43.478 14.67 12.81 0.00 2.73
2423 2518 3.365220 GCGTTGTCTAAACTCAGCTGTAG 59.635 47.826 14.67 12.16 0.00 2.74
2424 2519 3.314553 GCGTTGTCTAAACTCAGCTGTA 58.685 45.455 14.67 0.00 0.00 2.74
2425 2520 2.135933 GCGTTGTCTAAACTCAGCTGT 58.864 47.619 14.67 0.00 0.00 4.40
2426 2521 1.461127 GGCGTTGTCTAAACTCAGCTG 59.539 52.381 7.63 7.63 0.00 4.24
2427 2522 1.344763 AGGCGTTGTCTAAACTCAGCT 59.655 47.619 0.00 0.00 0.00 4.24
2428 2523 1.797025 AGGCGTTGTCTAAACTCAGC 58.203 50.000 0.00 0.00 0.00 4.26
2429 2524 3.184581 GTGAAGGCGTTGTCTAAACTCAG 59.815 47.826 0.00 0.00 0.00 3.35
2430 2525 3.128349 GTGAAGGCGTTGTCTAAACTCA 58.872 45.455 0.00 0.00 0.00 3.41
2431 2526 3.128349 TGTGAAGGCGTTGTCTAAACTC 58.872 45.455 0.00 0.00 0.00 3.01
2432 2527 3.188159 TGTGAAGGCGTTGTCTAAACT 57.812 42.857 0.00 0.00 0.00 2.66
2433 2528 4.219033 CAATGTGAAGGCGTTGTCTAAAC 58.781 43.478 0.00 0.00 32.39 2.01
2434 2529 3.880490 ACAATGTGAAGGCGTTGTCTAAA 59.120 39.130 0.00 0.00 42.85 1.85
2435 2530 3.472652 ACAATGTGAAGGCGTTGTCTAA 58.527 40.909 0.00 0.00 42.85 2.10
2436 2531 3.120321 ACAATGTGAAGGCGTTGTCTA 57.880 42.857 0.00 0.00 42.85 2.59
2437 2532 1.967319 ACAATGTGAAGGCGTTGTCT 58.033 45.000 0.00 0.00 42.85 3.41
2440 2535 0.950836 TGGACAATGTGAAGGCGTTG 59.049 50.000 0.00 0.00 40.24 4.10
2441 2536 1.238439 CTGGACAATGTGAAGGCGTT 58.762 50.000 0.00 0.00 0.00 4.84
2442 2537 0.606401 CCTGGACAATGTGAAGGCGT 60.606 55.000 0.00 0.00 0.00 5.68
2443 2538 1.926511 GCCTGGACAATGTGAAGGCG 61.927 60.000 17.00 0.00 43.64 5.52
2444 2539 1.885871 GCCTGGACAATGTGAAGGC 59.114 57.895 17.00 17.00 46.04 4.35
2445 2540 0.606401 ACGCCTGGACAATGTGAAGG 60.606 55.000 0.00 6.59 0.00 3.46
2446 2541 0.518636 CACGCCTGGACAATGTGAAG 59.481 55.000 0.00 0.00 32.39 3.02
2447 2542 0.888736 CCACGCCTGGACAATGTGAA 60.889 55.000 0.00 0.00 40.55 3.18
2448 2543 1.302431 CCACGCCTGGACAATGTGA 60.302 57.895 0.00 0.00 40.55 3.58
2449 2544 1.302431 TCCACGCCTGGACAATGTG 60.302 57.895 0.00 0.00 42.15 3.21
2450 2545 3.156714 TCCACGCCTGGACAATGT 58.843 55.556 0.00 0.00 42.15 2.71
2456 2551 1.003839 GACAATGTCCACGCCTGGA 60.004 57.895 1.10 0.00 45.11 3.86
2457 2552 2.390599 CGACAATGTCCACGCCTGG 61.391 63.158 7.91 0.00 39.23 4.45
2458 2553 1.354337 CTCGACAATGTCCACGCCTG 61.354 60.000 7.91 0.00 0.00 4.85
2459 2554 1.079819 CTCGACAATGTCCACGCCT 60.080 57.895 7.91 0.00 0.00 5.52
2460 2555 2.100631 CCTCGACAATGTCCACGCC 61.101 63.158 7.91 0.00 0.00 5.68
2461 2556 1.352156 GACCTCGACAATGTCCACGC 61.352 60.000 7.91 0.00 0.00 5.34
2462 2557 1.071019 CGACCTCGACAATGTCCACG 61.071 60.000 7.91 0.00 43.02 4.94
2463 2558 0.242825 TCGACCTCGACAATGTCCAC 59.757 55.000 7.91 0.00 44.22 4.02
2464 2559 2.648593 TCGACCTCGACAATGTCCA 58.351 52.632 7.91 0.00 44.22 4.02
2474 2569 3.066900 ACACATCCTCTAAATCGACCTCG 59.933 47.826 0.00 0.00 41.45 4.63
2475 2570 4.657436 ACACATCCTCTAAATCGACCTC 57.343 45.455 0.00 0.00 0.00 3.85
2476 2571 8.423906 AATATACACATCCTCTAAATCGACCT 57.576 34.615 0.00 0.00 0.00 3.85
2477 2572 8.926710 CAAATATACACATCCTCTAAATCGACC 58.073 37.037 0.00 0.00 0.00 4.79
2478 2573 8.926710 CCAAATATACACATCCTCTAAATCGAC 58.073 37.037 0.00 0.00 0.00 4.20
2479 2574 8.866093 TCCAAATATACACATCCTCTAAATCGA 58.134 33.333 0.00 0.00 0.00 3.59
2480 2575 8.926710 GTCCAAATATACACATCCTCTAAATCG 58.073 37.037 0.00 0.00 0.00 3.34
2481 2576 8.926710 CGTCCAAATATACACATCCTCTAAATC 58.073 37.037 0.00 0.00 0.00 2.17
2482 2577 8.647796 TCGTCCAAATATACACATCCTCTAAAT 58.352 33.333 0.00 0.00 0.00 1.40
2483 2578 7.924412 GTCGTCCAAATATACACATCCTCTAAA 59.076 37.037 0.00 0.00 0.00 1.85
2484 2579 7.431249 GTCGTCCAAATATACACATCCTCTAA 58.569 38.462 0.00 0.00 0.00 2.10
2485 2580 6.015688 GGTCGTCCAAATATACACATCCTCTA 60.016 42.308 0.00 0.00 0.00 2.43
2486 2581 5.221461 GGTCGTCCAAATATACACATCCTCT 60.221 44.000 0.00 0.00 0.00 3.69
2487 2582 4.989168 GGTCGTCCAAATATACACATCCTC 59.011 45.833 0.00 0.00 0.00 3.71
2488 2583 4.407621 TGGTCGTCCAAATATACACATCCT 59.592 41.667 0.00 0.00 41.25 3.24
2489 2584 4.699637 TGGTCGTCCAAATATACACATCC 58.300 43.478 0.00 0.00 41.25 3.51
2503 2598 3.068307 ACAGCTTGTCTATATGGTCGTCC 59.932 47.826 0.00 0.00 0.00 4.79
2504 2599 4.308899 ACAGCTTGTCTATATGGTCGTC 57.691 45.455 0.00 0.00 0.00 4.20
2505 2600 4.433615 CAACAGCTTGTCTATATGGTCGT 58.566 43.478 0.00 0.00 0.00 4.34
2506 2601 3.804325 CCAACAGCTTGTCTATATGGTCG 59.196 47.826 0.00 0.00 0.00 4.79
2507 2602 4.811557 GTCCAACAGCTTGTCTATATGGTC 59.188 45.833 0.00 0.00 0.00 4.02
2508 2603 4.680708 CGTCCAACAGCTTGTCTATATGGT 60.681 45.833 0.00 0.00 0.00 3.55
2509 2604 3.804325 CGTCCAACAGCTTGTCTATATGG 59.196 47.826 0.00 0.00 0.00 2.74
2510 2605 4.433615 ACGTCCAACAGCTTGTCTATATG 58.566 43.478 0.00 0.00 0.00 1.78
2511 2606 4.402793 AGACGTCCAACAGCTTGTCTATAT 59.597 41.667 13.01 0.00 35.10 0.86
2512 2607 3.762288 AGACGTCCAACAGCTTGTCTATA 59.238 43.478 13.01 0.00 35.10 1.31
2513 2608 2.563179 AGACGTCCAACAGCTTGTCTAT 59.437 45.455 13.01 0.00 35.10 1.98
2514 2609 1.961394 AGACGTCCAACAGCTTGTCTA 59.039 47.619 13.01 0.00 35.10 2.59
2515 2610 0.753262 AGACGTCCAACAGCTTGTCT 59.247 50.000 13.01 0.00 32.19 3.41
2516 2611 0.861837 CAGACGTCCAACAGCTTGTC 59.138 55.000 13.01 0.00 0.00 3.18
2517 2612 0.178068 ACAGACGTCCAACAGCTTGT 59.822 50.000 13.01 4.36 0.00 3.16
2518 2613 1.299541 AACAGACGTCCAACAGCTTG 58.700 50.000 13.01 3.65 0.00 4.01
2519 2614 2.038387 AAACAGACGTCCAACAGCTT 57.962 45.000 13.01 0.00 0.00 3.74
2520 2615 1.670811 CAAAACAGACGTCCAACAGCT 59.329 47.619 13.01 0.00 0.00 4.24
2521 2616 1.268539 CCAAAACAGACGTCCAACAGC 60.269 52.381 13.01 0.00 0.00 4.40
2522 2617 1.333619 CCCAAAACAGACGTCCAACAG 59.666 52.381 13.01 0.00 0.00 3.16
2523 2618 1.384525 CCCAAAACAGACGTCCAACA 58.615 50.000 13.01 0.00 0.00 3.33
2524 2619 0.030235 GCCCAAAACAGACGTCCAAC 59.970 55.000 13.01 0.00 0.00 3.77
2525 2620 0.106918 AGCCCAAAACAGACGTCCAA 60.107 50.000 13.01 0.00 0.00 3.53
2526 2621 0.534203 GAGCCCAAAACAGACGTCCA 60.534 55.000 13.01 0.00 0.00 4.02
2527 2622 0.534203 TGAGCCCAAAACAGACGTCC 60.534 55.000 13.01 0.00 0.00 4.79
2528 2623 0.586802 GTGAGCCCAAAACAGACGTC 59.413 55.000 7.70 7.70 0.00 4.34
2529 2624 1.157870 CGTGAGCCCAAAACAGACGT 61.158 55.000 0.00 0.00 0.00 4.34
2530 2625 1.157870 ACGTGAGCCCAAAACAGACG 61.158 55.000 0.00 0.00 0.00 4.18
2531 2626 0.586802 GACGTGAGCCCAAAACAGAC 59.413 55.000 0.00 0.00 0.00 3.51
2532 2627 0.878523 CGACGTGAGCCCAAAACAGA 60.879 55.000 0.00 0.00 0.00 3.41
2533 2628 1.157870 ACGACGTGAGCCCAAAACAG 61.158 55.000 0.00 0.00 0.00 3.16
2534 2629 1.153329 ACGACGTGAGCCCAAAACA 60.153 52.632 0.00 0.00 0.00 2.83
2535 2630 1.278637 CACGACGTGAGCCCAAAAC 59.721 57.895 23.39 0.00 35.23 2.43
2536 2631 1.890041 CCACGACGTGAGCCCAAAA 60.890 57.895 28.83 0.00 35.23 2.44
2537 2632 2.280524 CCACGACGTGAGCCCAAA 60.281 61.111 28.83 0.00 35.23 3.28
2538 2633 2.313051 TTTCCACGACGTGAGCCCAA 62.313 55.000 28.83 10.67 35.23 4.12
2539 2634 2.313051 TTTTCCACGACGTGAGCCCA 62.313 55.000 28.83 6.18 35.23 5.36
2540 2635 1.595929 TTTTCCACGACGTGAGCCC 60.596 57.895 28.83 0.00 35.23 5.19
2541 2636 1.568025 GTTTTCCACGACGTGAGCC 59.432 57.895 28.83 8.24 35.23 4.70
2551 2646 5.657474 TGGATGTCTATACTCGTTTTCCAC 58.343 41.667 0.00 0.00 0.00 4.02
2552 2647 5.925506 TGGATGTCTATACTCGTTTTCCA 57.074 39.130 0.00 0.00 0.00 3.53
2553 2648 9.790389 CTATATGGATGTCTATACTCGTTTTCC 57.210 37.037 0.00 0.00 0.00 3.13
2556 2651 9.516546 TGTCTATATGGATGTCTATACTCGTTT 57.483 33.333 0.00 0.00 0.00 3.60
2557 2652 9.516546 TTGTCTATATGGATGTCTATACTCGTT 57.483 33.333 0.00 0.00 0.00 3.85
2558 2653 9.168451 CTTGTCTATATGGATGTCTATACTCGT 57.832 37.037 0.00 0.00 0.00 4.18
2559 2654 8.126074 GCTTGTCTATATGGATGTCTATACTCG 58.874 40.741 0.00 0.00 0.00 4.18
2560 2655 9.184523 AGCTTGTCTATATGGATGTCTATACTC 57.815 37.037 0.00 0.00 0.00 2.59
2565 2660 8.753133 CCAATAGCTTGTCTATATGGATGTCTA 58.247 37.037 0.00 0.00 37.71 2.59
2566 2661 7.455953 TCCAATAGCTTGTCTATATGGATGTCT 59.544 37.037 0.00 0.00 38.52 3.41
2567 2662 7.615403 TCCAATAGCTTGTCTATATGGATGTC 58.385 38.462 0.00 0.00 38.52 3.06
2568 2663 7.455953 TCTCCAATAGCTTGTCTATATGGATGT 59.544 37.037 0.00 0.00 40.28 3.06
2569 2664 7.845037 TCTCCAATAGCTTGTCTATATGGATG 58.155 38.462 0.00 8.98 40.28 3.51
2570 2665 8.484575 CATCTCCAATAGCTTGTCTATATGGAT 58.515 37.037 0.00 0.00 40.28 3.41
2571 2666 7.580302 GCATCTCCAATAGCTTGTCTATATGGA 60.580 40.741 0.00 11.56 39.65 3.41
2572 2667 6.538021 GCATCTCCAATAGCTTGTCTATATGG 59.462 42.308 0.00 0.00 37.01 2.74
2573 2668 7.329499 AGCATCTCCAATAGCTTGTCTATATG 58.671 38.462 0.00 0.00 37.01 1.78
2574 2669 7.493499 AGCATCTCCAATAGCTTGTCTATAT 57.507 36.000 0.00 0.00 37.01 0.86
2575 2670 6.924913 AGCATCTCCAATAGCTTGTCTATA 57.075 37.500 0.00 0.00 37.01 1.31
2576 2671 5.792741 GAGCATCTCCAATAGCTTGTCTAT 58.207 41.667 0.00 0.00 39.62 1.98
2577 2672 5.207110 GAGCATCTCCAATAGCTTGTCTA 57.793 43.478 0.00 0.00 37.48 2.59
2578 2673 4.070630 GAGCATCTCCAATAGCTTGTCT 57.929 45.455 0.00 0.00 37.48 3.41
2593 2688 9.102757 TCAAGAAACTTGACATATAAGAGCATC 57.897 33.333 9.67 0.00 0.00 3.91
2594 2689 9.453572 TTCAAGAAACTTGACATATAAGAGCAT 57.546 29.630 12.74 0.00 0.00 3.79
2595 2690 8.846943 TTCAAGAAACTTGACATATAAGAGCA 57.153 30.769 12.74 0.00 0.00 4.26
2699 2794 1.268488 TGCAATGCACGACACACTTTC 60.268 47.619 2.72 0.00 31.71 2.62
3081 3176 4.651045 ACATTTTTGGCTTCCAAGTTCTCT 59.349 37.500 0.00 0.00 44.84 3.10
3125 3220 5.734498 CACGCAGCTGTTTCTTTTACATATC 59.266 40.000 16.64 0.00 0.00 1.63
3158 3253 8.804743 CAATTCATGCAGCAAATAGTAAAAGAG 58.195 33.333 0.00 0.00 0.00 2.85
3389 3484 6.543831 AGTCTGGATATAATTTGCAGAACCAC 59.456 38.462 1.86 0.00 42.20 4.16
3465 3566 3.892588 GACTAGGGTAGGTGAGAATCCTG 59.107 52.174 0.00 0.00 36.60 3.86
3478 3579 8.651389 CCAGAAATTGATGATTAGACTAGGGTA 58.349 37.037 0.00 0.00 0.00 3.69
3826 3927 3.318839 TGACAAGGCCATCAACTTCAAAG 59.681 43.478 5.01 0.00 0.00 2.77
3833 3934 3.412386 AGTAACTGACAAGGCCATCAAC 58.588 45.455 5.01 1.27 0.00 3.18
3853 3954 6.758886 GGTCACCATTCATAACTACTCAAGAG 59.241 42.308 0.00 0.00 0.00 2.85
3869 3970 1.287442 TGGGCATACATGGTCACCATT 59.713 47.619 6.58 1.51 42.23 3.16
4066 4168 7.110155 GGGAACAAGACTGATAATTCACCTAA 58.890 38.462 0.00 0.00 0.00 2.69
4067 4169 6.214615 TGGGAACAAGACTGATAATTCACCTA 59.785 38.462 0.00 0.00 37.44 3.08
4068 4170 5.014123 TGGGAACAAGACTGATAATTCACCT 59.986 40.000 0.00 0.00 37.44 4.00
4193 4324 9.196139 TCCGTCCCAAAATATAAGATCATTTTT 57.804 29.630 0.00 0.00 33.23 1.94
4484 4617 8.831715 AATCAAGGGTTAACAAAACAATCATC 57.168 30.769 8.10 0.00 0.00 2.92
4900 5034 4.634883 AGCAAATGCACTGAGTAGAAGATG 59.365 41.667 8.28 0.00 45.16 2.90
4921 5055 4.648970 GAGCATCAGTAAACCGTTAAAGC 58.351 43.478 0.00 0.00 33.17 3.51
5118 5254 9.427127 GCACTAAATCGAGAATGAAATTTCTAC 57.573 33.333 18.64 9.94 36.07 2.59
5307 5443 7.254727 GCACACATGTTTGAAATAATTTGGTGT 60.255 33.333 16.10 0.00 35.22 4.16
5358 5494 1.808945 GCTCCTGACATGAAGTGGTTG 59.191 52.381 0.00 0.00 0.00 3.77
5366 5502 0.907486 CCTTCTGGCTCCTGACATGA 59.093 55.000 0.00 0.00 0.00 3.07
5430 5566 6.693545 CACGTCTAGGAATCTATCTGACAAAC 59.306 42.308 0.00 0.00 0.00 2.93
5440 5577 3.887352 ACTGCTCACGTCTAGGAATCTA 58.113 45.455 0.00 0.00 0.00 1.98
5521 5658 1.126948 TGGTGATGTCCCTGCTCACA 61.127 55.000 4.52 0.00 40.80 3.58
5898 6035 5.105146 AGGCTGTTTCCATTTTTGTACACAA 60.105 36.000 0.00 0.00 0.00 3.33
5948 6085 2.726066 GCAAAGCGATGGAGAAACTTCG 60.726 50.000 0.00 0.00 34.83 3.79
5988 6126 9.936759 GGTAAACAAAATCCAATCCATTTTCTA 57.063 29.630 0.00 0.00 32.25 2.10
6198 6344 6.064717 GCCTGAGTCCCATAATTTCTGTAAT 58.935 40.000 0.00 0.00 0.00 1.89
6200 6346 4.721776 AGCCTGAGTCCCATAATTTCTGTA 59.278 41.667 0.00 0.00 0.00 2.74
6201 6347 3.525199 AGCCTGAGTCCCATAATTTCTGT 59.475 43.478 0.00 0.00 0.00 3.41
6203 6349 4.870021 AAGCCTGAGTCCCATAATTTCT 57.130 40.909 0.00 0.00 0.00 2.52
6204 6350 5.921962 AAAAGCCTGAGTCCCATAATTTC 57.078 39.130 0.00 0.00 0.00 2.17
6208 6354 6.824958 ACTATAAAAGCCTGAGTCCCATAA 57.175 37.500 0.00 0.00 0.00 1.90
6211 6357 4.783227 AGAACTATAAAAGCCTGAGTCCCA 59.217 41.667 0.00 0.00 0.00 4.37
6212 6358 5.360649 AGAACTATAAAAGCCTGAGTCCC 57.639 43.478 0.00 0.00 0.00 4.46
6217 6363 6.213600 ACAGAAGGAGAACTATAAAAGCCTGA 59.786 38.462 0.00 0.00 0.00 3.86
6218 6364 6.410540 ACAGAAGGAGAACTATAAAAGCCTG 58.589 40.000 0.00 0.00 0.00 4.85
6333 6533 4.826733 TCAAGTGTCCATGTGCAATACTTT 59.173 37.500 0.00 0.00 0.00 2.66
6346 6546 8.258007 CAGTAAGAATATTACCTCAAGTGTCCA 58.742 37.037 0.00 0.00 0.00 4.02
6377 6577 8.736244 GGAGTGTAATTTAGACAGGCATAAAAA 58.264 33.333 6.49 0.00 0.00 1.94
6384 6584 4.816925 GGATGGAGTGTAATTTAGACAGGC 59.183 45.833 6.49 0.00 0.00 4.85
6385 6585 5.050490 CGGATGGAGTGTAATTTAGACAGG 58.950 45.833 6.49 0.00 0.00 4.00
6387 6587 5.670792 ACGGATGGAGTGTAATTTAGACA 57.329 39.130 6.49 0.00 0.00 3.41
6392 6592 7.989416 TTTTAGAACGGATGGAGTGTAATTT 57.011 32.000 0.00 0.00 0.00 1.82
6396 6596 7.649533 TCTATTTTAGAACGGATGGAGTGTA 57.350 36.000 0.00 0.00 0.00 2.90
6397 6597 6.540438 TCTATTTTAGAACGGATGGAGTGT 57.460 37.500 0.00 0.00 0.00 3.55
6398 6598 7.169982 GTCATCTATTTTAGAACGGATGGAGTG 59.830 40.741 0.00 0.00 38.50 3.51
6399 6599 7.210873 GTCATCTATTTTAGAACGGATGGAGT 58.789 38.462 0.00 0.00 38.50 3.85
6400 6600 6.647067 GGTCATCTATTTTAGAACGGATGGAG 59.353 42.308 0.00 0.00 38.50 3.86
6401 6601 6.099125 TGGTCATCTATTTTAGAACGGATGGA 59.901 38.462 0.00 0.00 38.50 3.41
6402 6602 6.288294 TGGTCATCTATTTTAGAACGGATGG 58.712 40.000 0.00 0.00 38.50 3.51
6403 6603 7.495934 AGTTGGTCATCTATTTTAGAACGGATG 59.504 37.037 0.00 0.00 38.50 3.51
6404 6604 7.565680 AGTTGGTCATCTATTTTAGAACGGAT 58.434 34.615 0.00 0.00 38.50 4.18
6405 6605 6.942976 AGTTGGTCATCTATTTTAGAACGGA 58.057 36.000 0.00 0.00 38.50 4.69
6406 6606 7.611213 AAGTTGGTCATCTATTTTAGAACGG 57.389 36.000 0.00 0.00 38.50 4.44
6407 6607 9.367444 ACTAAGTTGGTCATCTATTTTAGAACG 57.633 33.333 0.00 0.00 38.50 3.95
6420 6620 9.379791 GCATAAAGTTAGTACTAAGTTGGTCAT 57.620 33.333 28.25 18.09 38.35 3.06
6421 6621 8.591072 AGCATAAAGTTAGTACTAAGTTGGTCA 58.409 33.333 28.25 17.48 38.35 4.02
6422 6622 8.999220 AGCATAAAGTTAGTACTAAGTTGGTC 57.001 34.615 28.25 19.33 38.35 4.02
6459 6659 8.987890 CCGTTCCAAAATAAATGATTCAACTTT 58.012 29.630 0.00 0.00 0.00 2.66
6460 6660 8.147704 ACCGTTCCAAAATAAATGATTCAACTT 58.852 29.630 0.00 0.00 0.00 2.66
6461 6661 7.598493 CACCGTTCCAAAATAAATGATTCAACT 59.402 33.333 0.00 0.00 0.00 3.16
6462 6662 7.148656 CCACCGTTCCAAAATAAATGATTCAAC 60.149 37.037 0.00 0.00 0.00 3.18
6463 6663 6.870965 CCACCGTTCCAAAATAAATGATTCAA 59.129 34.615 0.00 0.00 0.00 2.69
6464 6664 6.393990 CCACCGTTCCAAAATAAATGATTCA 58.606 36.000 0.00 0.00 0.00 2.57
6465 6665 5.810074 CCCACCGTTCCAAAATAAATGATTC 59.190 40.000 0.00 0.00 0.00 2.52
6466 6666 5.482175 TCCCACCGTTCCAAAATAAATGATT 59.518 36.000 0.00 0.00 0.00 2.57
6467 6667 5.020132 TCCCACCGTTCCAAAATAAATGAT 58.980 37.500 0.00 0.00 0.00 2.45
6468 6668 4.408276 TCCCACCGTTCCAAAATAAATGA 58.592 39.130 0.00 0.00 0.00 2.57
6469 6669 4.219725 ACTCCCACCGTTCCAAAATAAATG 59.780 41.667 0.00 0.00 0.00 2.32
6470 6670 4.412843 ACTCCCACCGTTCCAAAATAAAT 58.587 39.130 0.00 0.00 0.00 1.40
6471 6671 3.834938 ACTCCCACCGTTCCAAAATAAA 58.165 40.909 0.00 0.00 0.00 1.40
6472 6672 3.512219 ACTCCCACCGTTCCAAAATAA 57.488 42.857 0.00 0.00 0.00 1.40
6473 6673 3.617045 CGTACTCCCACCGTTCCAAAATA 60.617 47.826 0.00 0.00 0.00 1.40
6474 6674 2.786777 GTACTCCCACCGTTCCAAAAT 58.213 47.619 0.00 0.00 0.00 1.82
6475 6675 1.540797 CGTACTCCCACCGTTCCAAAA 60.541 52.381 0.00 0.00 0.00 2.44
6476 6676 0.033781 CGTACTCCCACCGTTCCAAA 59.966 55.000 0.00 0.00 0.00 3.28
6477 6677 1.114722 ACGTACTCCCACCGTTCCAA 61.115 55.000 0.00 0.00 0.00 3.53
6478 6678 1.531365 ACGTACTCCCACCGTTCCA 60.531 57.895 0.00 0.00 0.00 3.53
6479 6679 1.080298 CACGTACTCCCACCGTTCC 60.080 63.158 0.00 0.00 31.46 3.62
6480 6680 1.080298 CCACGTACTCCCACCGTTC 60.080 63.158 0.00 0.00 31.46 3.95
6481 6681 3.053828 CCACGTACTCCCACCGTT 58.946 61.111 0.00 0.00 31.46 4.44
6482 6682 3.688159 GCCACGTACTCCCACCGT 61.688 66.667 0.00 0.00 34.71 4.83
6483 6683 3.642778 CTGCCACGTACTCCCACCG 62.643 68.421 0.00 0.00 0.00 4.94
6484 6684 2.264794 CTGCCACGTACTCCCACC 59.735 66.667 0.00 0.00 0.00 4.61
6485 6685 1.374252 CACTGCCACGTACTCCCAC 60.374 63.158 0.00 0.00 0.00 4.61
6486 6686 2.579657 CCACTGCCACGTACTCCCA 61.580 63.158 0.00 0.00 0.00 4.37
6487 6687 2.264794 CCACTGCCACGTACTCCC 59.735 66.667 0.00 0.00 0.00 4.30
6488 6688 2.434359 GCCACTGCCACGTACTCC 60.434 66.667 0.00 0.00 0.00 3.85
6498 6698 1.586154 AAACATAGCGTGGCCACTGC 61.586 55.000 32.04 32.04 0.00 4.40
6499 6699 0.881118 AAAACATAGCGTGGCCACTG 59.119 50.000 32.28 24.98 0.00 3.66
6500 6700 0.881118 CAAAACATAGCGTGGCCACT 59.119 50.000 32.28 18.20 0.00 4.00
6501 6701 0.596082 ACAAAACATAGCGTGGCCAC 59.404 50.000 26.78 26.78 0.00 5.01
6502 6702 2.186532 TACAAAACATAGCGTGGCCA 57.813 45.000 0.00 0.00 0.00 5.36
6503 6703 2.486592 ACTTACAAAACATAGCGTGGCC 59.513 45.455 0.00 0.00 0.00 5.36
6504 6704 3.723835 CGACTTACAAAACATAGCGTGGC 60.724 47.826 0.00 0.00 0.00 5.01
6505 6705 3.723835 GCGACTTACAAAACATAGCGTGG 60.724 47.826 0.00 0.00 0.00 4.94
6506 6706 3.120820 TGCGACTTACAAAACATAGCGTG 60.121 43.478 0.00 0.00 0.00 5.34
6507 6707 3.061322 TGCGACTTACAAAACATAGCGT 58.939 40.909 0.00 0.00 0.00 5.07
6508 6708 3.404564 GTGCGACTTACAAAACATAGCG 58.595 45.455 0.00 0.00 0.00 4.26
6509 6709 3.404564 CGTGCGACTTACAAAACATAGC 58.595 45.455 0.00 0.00 0.00 2.97
6510 6710 3.120820 TGCGTGCGACTTACAAAACATAG 60.121 43.478 0.00 0.00 0.00 2.23
6511 6711 2.801111 TGCGTGCGACTTACAAAACATA 59.199 40.909 0.00 0.00 0.00 2.29
6512 6712 1.600013 TGCGTGCGACTTACAAAACAT 59.400 42.857 0.00 0.00 0.00 2.71
6513 6713 1.007580 TGCGTGCGACTTACAAAACA 58.992 45.000 0.00 0.00 0.00 2.83
6514 6714 1.382163 GTGCGTGCGACTTACAAAAC 58.618 50.000 0.00 0.00 0.00 2.43
6515 6715 0.042880 CGTGCGTGCGACTTACAAAA 60.043 50.000 0.00 0.00 0.00 2.44
6516 6716 1.560770 CGTGCGTGCGACTTACAAA 59.439 52.632 0.00 0.00 0.00 2.83
6517 6717 2.934324 GCGTGCGTGCGACTTACAA 61.934 57.895 5.04 0.00 0.00 2.41
6518 6718 3.399770 GCGTGCGTGCGACTTACA 61.400 61.111 5.04 0.00 0.00 2.41
6530 6730 2.275812 GTACGAATGTGCGCGTGC 60.276 61.111 15.48 15.48 41.35 5.34
6531 6731 2.018137 CGTACGAATGTGCGCGTG 59.982 61.111 10.44 0.00 46.70 5.34
6536 6736 3.089784 CTGGCCGTACGAATGTGC 58.910 61.111 18.76 10.99 0.00 4.57
6537 6737 2.461110 GGCTGGCCGTACGAATGTG 61.461 63.158 18.76 0.00 0.00 3.21
6538 6738 2.125269 GGCTGGCCGTACGAATGT 60.125 61.111 18.76 0.00 0.00 2.71
6539 6739 2.895372 GGGCTGGCCGTACGAATG 60.895 66.667 18.76 0.48 36.85 2.67
6540 6740 4.524318 CGGGCTGGCCGTACGAAT 62.524 66.667 31.75 0.00 36.85 3.34
6545 6745 3.454573 CAGTACGGGCTGGCCGTA 61.455 66.667 40.53 40.53 43.77 4.02
6555 6755 1.275291 CCACTATATGGCCCAGTACGG 59.725 57.143 0.00 0.00 43.24 4.02
6556 6756 2.743636 CCACTATATGGCCCAGTACG 57.256 55.000 0.00 0.00 43.24 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.