Multiple sequence alignment - TraesCS5B01G069400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G069400 chr5B 100.000 4139 0 0 1 4139 79345508 79349646 0.000000e+00 7644
1 TraesCS5B01G069400 chr5B 96.262 107 3 1 130 235 671343280 671343386 1.530000e-39 174
2 TraesCS5B01G069400 chr5D 93.894 2129 92 16 1509 3616 72618060 72615949 0.000000e+00 3177
3 TraesCS5B01G069400 chr5D 94.568 1307 51 11 228 1515 72619424 72618119 0.000000e+00 2002
4 TraesCS5B01G069400 chr5D 89.602 327 29 5 279 602 72619696 72619372 1.070000e-110 411
5 TraesCS5B01G069400 chr5D 94.043 235 11 3 3613 3846 72615888 72615656 1.830000e-93 353
6 TraesCS5B01G069400 chr5D 95.588 136 6 0 1 136 72619561 72619426 6.970000e-53 219
7 TraesCS5B01G069400 chr5D 90.441 136 11 2 1 136 72619238 72619105 1.180000e-40 178
8 TraesCS5B01G069400 chr5A 91.442 1671 101 19 1961 3616 67320477 67318834 0.000000e+00 2255
9 TraesCS5B01G069400 chr5A 91.429 840 59 6 622 1452 67321860 67321025 0.000000e+00 1140
10 TraesCS5B01G069400 chr5A 87.002 477 42 9 1458 1926 67320943 67320479 1.710000e-143 520
11 TraesCS5B01G069400 chr5A 90.407 344 24 5 279 619 67322690 67322353 1.060000e-120 444
12 TraesCS5B01G069400 chr5A 91.880 234 15 3 3613 3846 67318800 67318571 1.440000e-84 324
13 TraesCS5B01G069400 chr5A 91.912 136 10 1 1 136 67322554 67322420 5.460000e-44 189
14 TraesCS5B01G069400 chr6B 94.649 299 11 4 3845 4139 35309041 35308744 3.770000e-125 459
15 TraesCS5B01G069400 chr6B 92.334 287 16 2 3846 4130 243237532 243237250 1.790000e-108 403
16 TraesCS5B01G069400 chr4A 94.295 298 12 4 3846 4139 557725059 557725355 6.310000e-123 451
17 TraesCS5B01G069400 chr6A 92.150 293 17 2 3845 4135 171443979 171444267 3.850000e-110 409
18 TraesCS5B01G069400 chr6A 91.071 112 10 0 2343 2454 31353325 31353436 7.170000e-33 152
19 TraesCS5B01G069400 chr3A 90.970 299 21 2 3839 4135 459064880 459065174 8.340000e-107 398
20 TraesCS5B01G069400 chr3A 90.728 302 20 4 3837 4135 67407335 67407631 3.000000e-106 396
21 TraesCS5B01G069400 chr2B 90.311 289 21 3 3845 4131 74210513 74210230 5.050000e-99 372
22 TraesCS5B01G069400 chr2B 88.396 293 23 5 3844 4135 90618478 90618760 3.960000e-90 342
23 TraesCS5B01G069400 chr2B 94.690 113 4 2 130 241 397939475 397939364 1.530000e-39 174
24 TraesCS5B01G069400 chr7A 89.073 302 24 5 3837 4134 579334263 579333967 2.350000e-97 366
25 TraesCS5B01G069400 chr4D 90.732 205 15 1 3846 4050 13516299 13516499 1.900000e-68 270
26 TraesCS5B01G069400 chr3B 97.170 106 2 1 131 236 164032585 164032689 1.180000e-40 178
27 TraesCS5B01G069400 chr3B 95.536 112 2 3 127 236 5951435 5951325 4.250000e-40 176
28 TraesCS5B01G069400 chr3B 94.737 114 4 2 131 243 160478836 160478948 4.250000e-40 176
29 TraesCS5B01G069400 chr6D 96.262 107 4 0 134 240 52011282 52011176 4.250000e-40 176
30 TraesCS5B01G069400 chr4B 96.296 108 2 2 130 237 538218746 538218851 4.250000e-40 176
31 TraesCS5B01G069400 chr4B 94.690 113 5 1 124 236 163759082 163758971 1.530000e-39 174
32 TraesCS5B01G069400 chr1B 91.935 124 6 4 110 231 215844756 215844635 1.980000e-38 171


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G069400 chr5B 79345508 79349646 4138 False 7644.000000 7644 100.000000 1 4139 1 chr5B.!!$F1 4138
1 TraesCS5B01G069400 chr5D 72615656 72619696 4040 True 1056.666667 3177 93.022667 1 3846 6 chr5D.!!$R1 3845
2 TraesCS5B01G069400 chr5A 67318571 67322690 4119 True 812.000000 2255 90.678667 1 3846 6 chr5A.!!$R1 3845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
848 1488 0.392595 GGGATCAACCGGTCAACTCC 60.393 60.000 8.04 12.11 40.11 3.85 F
1767 2554 1.466950 TGCCGAAAAGATAACAAGGCG 59.533 47.619 0.00 0.00 45.44 5.52 F
2987 3798 0.873721 CACGTGGATGTGCATTGACA 59.126 50.000 7.95 0.00 32.31 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 2863 1.002033 CTCCTTGTCAGTGCTGCAAAC 60.002 52.381 2.77 3.96 0.00 2.93 R
2990 3801 0.107945 ACGCTGAATCAAGAGAGCCC 60.108 55.000 0.00 0.00 0.00 5.19 R
3850 4737 0.111748 GCAACGCACGTGCAATTTTC 60.112 50.000 37.03 18.62 42.21 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 168 5.804979 ACAAACTTTGTGTGAATCTTTTCCG 59.195 36.000 6.35 0.00 43.48 4.30
76 213 2.129607 GAACCATGTTGCAGCAAAGTG 58.870 47.619 10.11 11.38 0.00 3.16
91 228 5.185635 CAGCAAAGTGAAATATGAAAGGGGA 59.814 40.000 0.00 0.00 0.00 4.81
120 257 7.843760 TGAGGAAACCCATTTGTGGATAATTAT 59.156 33.333 0.00 0.00 0.00 1.28
140 277 8.904099 AATTATACAACTTGCATAGTACTCCC 57.096 34.615 0.00 0.00 35.54 4.30
141 278 7.670605 TTATACAACTTGCATAGTACTCCCT 57.329 36.000 0.00 0.00 35.54 4.20
142 279 4.473477 ACAACTTGCATAGTACTCCCTC 57.527 45.455 0.00 0.00 35.54 4.30
143 280 3.197983 ACAACTTGCATAGTACTCCCTCC 59.802 47.826 0.00 0.00 35.54 4.30
144 281 3.116096 ACTTGCATAGTACTCCCTCCA 57.884 47.619 0.00 0.00 34.56 3.86
145 282 3.658725 ACTTGCATAGTACTCCCTCCAT 58.341 45.455 0.00 0.00 34.56 3.41
146 283 3.643792 ACTTGCATAGTACTCCCTCCATC 59.356 47.826 0.00 0.00 34.56 3.51
147 284 2.609747 TGCATAGTACTCCCTCCATCC 58.390 52.381 0.00 0.00 0.00 3.51
148 285 1.903183 GCATAGTACTCCCTCCATCCC 59.097 57.143 0.00 0.00 0.00 3.85
149 286 2.760025 GCATAGTACTCCCTCCATCCCA 60.760 54.545 0.00 0.00 0.00 4.37
150 287 3.587498 CATAGTACTCCCTCCATCCCAA 58.413 50.000 0.00 0.00 0.00 4.12
151 288 2.661176 AGTACTCCCTCCATCCCAAA 57.339 50.000 0.00 0.00 0.00 3.28
152 289 2.929301 AGTACTCCCTCCATCCCAAAA 58.071 47.619 0.00 0.00 0.00 2.44
153 290 3.474920 AGTACTCCCTCCATCCCAAAAT 58.525 45.455 0.00 0.00 0.00 1.82
154 291 4.641868 AGTACTCCCTCCATCCCAAAATA 58.358 43.478 0.00 0.00 0.00 1.40
155 292 5.043762 AGTACTCCCTCCATCCCAAAATAA 58.956 41.667 0.00 0.00 0.00 1.40
156 293 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
157 294 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
158 295 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
159 296 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
160 297 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
161 298 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
162 299 4.884164 CCTCCATCCCAAAATAAGTGTCTC 59.116 45.833 0.00 0.00 0.00 3.36
163 300 5.500234 CTCCATCCCAAAATAAGTGTCTCA 58.500 41.667 0.00 0.00 0.00 3.27
164 301 5.886609 TCCATCCCAAAATAAGTGTCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
165 302 5.710099 TCCATCCCAAAATAAGTGTCTCAAC 59.290 40.000 0.00 0.00 0.00 3.18
166 303 5.711976 CCATCCCAAAATAAGTGTCTCAACT 59.288 40.000 0.00 0.00 0.00 3.16
167 304 6.209391 CCATCCCAAAATAAGTGTCTCAACTT 59.791 38.462 0.00 0.00 42.89 2.66
168 305 7.255942 CCATCCCAAAATAAGTGTCTCAACTTT 60.256 37.037 0.00 0.00 40.77 2.66
169 306 7.038154 TCCCAAAATAAGTGTCTCAACTTTG 57.962 36.000 0.00 0.00 40.77 2.77
170 307 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
171 308 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
172 309 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
173 310 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
176 313 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
177 314 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
178 315 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
179 316 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
180 317 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
181 318 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
183 320 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
207 344 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
208 345 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
209 346 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
210 347 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
211 348 9.555727 AAATTTGTACTAAGCTCAAGACACTTA 57.444 29.630 3.19 0.00 0.00 2.24
212 349 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
213 350 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
214 351 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
215 352 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
216 353 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
217 354 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
218 355 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
219 356 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
220 357 5.574188 AGCTCAAGACACTTATTTTGGGAT 58.426 37.500 0.00 0.00 0.00 3.85
221 358 5.416952 AGCTCAAGACACTTATTTTGGGATG 59.583 40.000 0.00 0.00 0.00 3.51
222 359 5.393461 GCTCAAGACACTTATTTTGGGATGG 60.393 44.000 0.00 0.00 0.00 3.51
223 360 5.886609 TCAAGACACTTATTTTGGGATGGA 58.113 37.500 0.00 0.00 0.00 3.41
224 361 5.945784 TCAAGACACTTATTTTGGGATGGAG 59.054 40.000 0.00 0.00 0.00 3.86
225 362 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
226 363 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
237 374 4.903149 TGGGATGGAGGGAGTAATAAAGA 58.097 43.478 0.00 0.00 0.00 2.52
243 380 7.147461 GGATGGAGGGAGTAATAAAGAAGAACT 60.147 40.741 0.00 0.00 0.00 3.01
302 439 5.862924 TGCTAGCTTTTTAGCTTACACAG 57.137 39.130 17.23 0.00 44.99 3.66
303 440 5.547465 TGCTAGCTTTTTAGCTTACACAGA 58.453 37.500 17.23 0.00 44.99 3.41
328 465 6.712095 ACTTCTCAATCTACATGTTTCTGCAA 59.288 34.615 2.30 0.00 0.00 4.08
353 490 1.079956 CGTCTTCTGCTCTGCTGCT 60.080 57.895 0.00 0.00 0.00 4.24
365 502 1.627329 TCTGCTGCTGAAGAGGACATT 59.373 47.619 6.77 0.00 0.00 2.71
421 558 6.665992 ATATCTTGATGCTTGCAAATGGAT 57.334 33.333 0.00 0.00 0.00 3.41
428 565 6.101332 TGATGCTTGCAAATGGATAAACTTC 58.899 36.000 0.00 0.00 0.00 3.01
465 602 6.310941 TCCCTTTCCAGTTTTCATGTCATTA 58.689 36.000 0.00 0.00 0.00 1.90
480 617 6.662663 TCATGTCATTAATGGAACCATGTCAA 59.337 34.615 22.74 3.26 36.68 3.18
654 1283 2.369532 TGTCCTGCCTAAACGTAACCTT 59.630 45.455 0.00 0.00 0.00 3.50
682 1311 6.043243 AGAGGTGATACATACCCTATGTTTGG 59.957 42.308 0.37 0.00 46.69 3.28
684 1313 5.763204 GGTGATACATACCCTATGTTTGGTG 59.237 44.000 0.37 0.00 46.69 4.17
685 1314 6.354130 GTGATACATACCCTATGTTTGGTGT 58.646 40.000 0.37 0.00 46.69 4.16
686 1315 6.826741 GTGATACATACCCTATGTTTGGTGTT 59.173 38.462 0.37 0.00 46.69 3.32
687 1316 7.988599 GTGATACATACCCTATGTTTGGTGTTA 59.011 37.037 0.37 0.00 46.69 2.41
688 1317 8.719596 TGATACATACCCTATGTTTGGTGTTAT 58.280 33.333 0.37 0.00 46.69 1.89
799 1439 7.253905 AGGAGTTTGTTTAGTAGGAGCAATA 57.746 36.000 0.00 0.00 0.00 1.90
848 1488 0.392595 GGGATCAACCGGTCAACTCC 60.393 60.000 8.04 12.11 40.11 3.85
872 1512 9.995003 TCCCCATTTTTAATTATGATATTGCAC 57.005 29.630 0.00 0.00 0.00 4.57
893 1533 5.688621 GCACGATAACCGAGTTGTGATATTA 59.311 40.000 0.00 0.00 41.76 0.98
913 1553 6.693315 ATTACCTTGCGCTTGTTTATATGT 57.307 33.333 9.73 0.00 0.00 2.29
1092 1732 4.129380 CCATGATTGCCGATAGAAGTTCA 58.871 43.478 5.50 0.00 39.76 3.18
1233 1873 8.366671 AGTCACTGTATGTTTTGACTACTTTC 57.633 34.615 1.27 0.00 45.41 2.62
1298 1939 7.243487 ACATTACTGCAATATTTGTTGACTCG 58.757 34.615 0.00 0.00 0.00 4.18
1311 1952 6.633500 TTGTTGACTCGGAAATCTTGAAAT 57.367 33.333 0.00 0.00 0.00 2.17
1348 1989 8.147244 AGTTACAAAGGAACATAGGACAGTAT 57.853 34.615 0.00 0.00 0.00 2.12
1388 2029 8.731275 TGTATGGACTGTTAAGTAATCCATTG 57.269 34.615 9.22 0.00 38.69 2.82
1446 2088 9.613428 TTCATCTATGGTTTACCTTATGTCTTG 57.387 33.333 0.00 0.00 36.82 3.02
1447 2089 7.715249 TCATCTATGGTTTACCTTATGTCTTGC 59.285 37.037 0.00 0.00 36.82 4.01
1453 2095 1.726853 ACCTTATGTCTTGCGTCAGC 58.273 50.000 0.00 0.00 45.41 4.26
1521 2308 8.337532 TCGCACAGTCAAAGAATCATTATAATG 58.662 33.333 17.82 17.82 37.75 1.90
1575 2362 4.083802 GCTGGTTCATACAAGTTCTGTGTC 60.084 45.833 0.00 0.00 39.20 3.67
1599 2386 5.483685 AATGTGTTGCTAGTAGAACCTCA 57.516 39.130 0.00 5.88 0.00 3.86
1675 2462 2.046285 GCAACCCTGGTCGATTGGG 61.046 63.158 15.78 15.78 46.07 4.12
1684 2471 2.361104 TCGATTGGGGCACAAGGC 60.361 61.111 8.70 1.35 43.48 4.35
1708 2495 2.972153 ATAGGGGATGGGGATAGGAC 57.028 55.000 0.00 0.00 0.00 3.85
1739 2526 2.313041 AGGGGCAAGAGGCTTCTTATTT 59.687 45.455 11.17 0.00 41.71 1.40
1767 2554 1.466950 TGCCGAAAAGATAACAAGGCG 59.533 47.619 0.00 0.00 45.44 5.52
1775 2562 6.309737 CGAAAAGATAACAAGGCGTAAGTAGT 59.690 38.462 0.00 0.00 41.68 2.73
1776 2563 7.485913 CGAAAAGATAACAAGGCGTAAGTAGTA 59.514 37.037 0.00 0.00 41.68 1.82
1843 2636 9.829507 AGATTCTAGACAAAGTAAATGGAGATG 57.170 33.333 0.00 0.00 0.00 2.90
1946 2740 5.601662 ACTACCATAGGATTGTCATTGACG 58.398 41.667 11.97 0.00 34.95 4.35
1950 2744 4.202253 CCATAGGATTGTCATTGACGGAGA 60.202 45.833 11.97 0.00 34.95 3.71
1957 2752 5.766150 TTGTCATTGACGGAGATTTTTGT 57.234 34.783 11.97 0.00 34.95 2.83
2191 2988 3.640967 TGCCAACAGGTTTATTCTGCTTT 59.359 39.130 0.00 0.00 35.78 3.51
2246 3043 2.300152 TCAATGCTCACCTTCTTCTCGT 59.700 45.455 0.00 0.00 0.00 4.18
2254 3051 3.260884 TCACCTTCTTCTCGTGGCTTAAT 59.739 43.478 0.00 0.00 0.00 1.40
2255 3052 3.619038 CACCTTCTTCTCGTGGCTTAATC 59.381 47.826 0.00 0.00 0.00 1.75
2256 3053 3.515901 ACCTTCTTCTCGTGGCTTAATCT 59.484 43.478 0.00 0.00 0.00 2.40
2377 3179 3.071602 TGCTTGGTCAGAGTAAGAAAGCT 59.928 43.478 6.12 0.00 39.36 3.74
2460 3262 7.806180 AGGCAAGTTATGAGAGGTATTATTGT 58.194 34.615 0.00 0.00 0.00 2.71
2461 3263 8.275040 AGGCAAGTTATGAGAGGTATTATTGTT 58.725 33.333 0.00 0.00 0.00 2.83
2462 3264 8.345565 GGCAAGTTATGAGAGGTATTATTGTTG 58.654 37.037 0.00 0.00 0.00 3.33
2573 3375 5.171476 CACACCTAATAGACTCCACAAGTG 58.829 45.833 0.00 0.00 38.74 3.16
2612 3415 9.988815 TTATTACTTGCATTTTGTATTGGTTGT 57.011 25.926 0.00 0.00 0.00 3.32
2653 3460 6.939730 TCTTAAATCACCAGCATTTGTGTAGA 59.060 34.615 0.00 0.00 34.14 2.59
2665 3472 8.839343 CAGCATTTGTGTAGATGATAACCATTA 58.161 33.333 0.00 0.00 35.17 1.90
2666 3473 9.407380 AGCATTTGTGTAGATGATAACCATTAA 57.593 29.630 0.00 0.00 35.17 1.40
2839 3647 4.651045 CCCTAAAAGAGCCCTATGCATTTT 59.349 41.667 3.54 0.00 44.83 1.82
2942 3750 7.016957 TCCCGTCTTCAGGTAGATATCTTACTA 59.983 40.741 11.25 0.00 0.00 1.82
2943 3751 7.334921 CCCGTCTTCAGGTAGATATCTTACTAG 59.665 44.444 11.25 5.41 0.00 2.57
2987 3798 0.873721 CACGTGGATGTGCATTGACA 59.126 50.000 7.95 0.00 32.31 3.58
2990 3801 0.168788 GTGGATGTGCATTGACACGG 59.831 55.000 0.00 0.00 43.74 4.94
2991 3802 0.959867 TGGATGTGCATTGACACGGG 60.960 55.000 0.00 0.00 43.74 5.28
2992 3803 1.656818 GGATGTGCATTGACACGGGG 61.657 60.000 0.00 0.00 43.74 5.73
3144 3955 7.540474 TCTCATCAAGTACCTGTAAAGAAGT 57.460 36.000 0.00 0.00 0.00 3.01
3150 3961 6.099269 TCAAGTACCTGTAAAGAAGTGTCCTT 59.901 38.462 0.00 0.00 0.00 3.36
3154 3967 2.480419 CTGTAAAGAAGTGTCCTTGCGG 59.520 50.000 0.00 0.00 0.00 5.69
3165 3978 2.252260 CTTGCGGCCGTTGTTCAG 59.748 61.111 28.70 9.81 0.00 3.02
3187 4000 2.285834 CGCATCGCTTGTTTGATACTCC 60.286 50.000 0.00 0.00 0.00 3.85
3282 4101 5.526111 ACGGTTGTATCAATATGTACAAGGC 59.474 40.000 0.00 0.00 40.37 4.35
3325 4144 6.115446 CCTACAAATATCTGTGTGTGGACAT 58.885 40.000 0.00 0.00 33.63 3.06
3350 4171 1.628846 GGCCTTTGTAAGTCTGGAGGA 59.371 52.381 0.00 0.00 0.00 3.71
3352 4173 3.497942 GGCCTTTGTAAGTCTGGAGGAAA 60.498 47.826 0.00 0.00 0.00 3.13
3383 4206 7.775053 ATACATTTTGTGAGGGTTTATGTGT 57.225 32.000 0.00 0.00 0.00 3.72
3394 4217 5.573219 AGGGTTTATGTGTTTTACCTACCC 58.427 41.667 0.00 0.00 0.00 3.69
3408 4231 4.311520 ACCTACCCTTTTCCATTGTACC 57.688 45.455 0.00 0.00 0.00 3.34
3425 4248 2.082366 CCAGTGTGCGCGATTTTGC 61.082 57.895 12.10 0.00 0.00 3.68
3455 4278 1.374947 GCTTGGGTGCCACTAGTGA 59.625 57.895 24.68 1.84 30.78 3.41
3463 4286 1.127567 TGCCACTAGTGAAGGGCAGT 61.128 55.000 24.68 0.00 42.89 4.40
3502 4325 2.528564 TCCCTCTCTTTGGGCAAAATG 58.471 47.619 0.00 0.00 44.23 2.32
3509 4332 0.543277 TTTGGGCAAAATGTGTGGCA 59.457 45.000 0.27 0.00 43.06 4.92
3518 4341 1.938625 AATGTGTGGCAACTTGTTGC 58.061 45.000 25.05 25.05 46.64 4.17
3545 4368 4.907809 TGGTCCGTTGGTTTCACAATATA 58.092 39.130 0.00 0.00 32.24 0.86
3546 4369 5.502079 TGGTCCGTTGGTTTCACAATATAT 58.498 37.500 0.00 0.00 32.24 0.86
3616 4439 3.326747 AGTGGAACATGAACGAAGCTAC 58.673 45.455 0.00 0.00 44.52 3.58
3617 4440 2.415512 GTGGAACATGAACGAAGCTACC 59.584 50.000 0.00 0.00 44.52 3.18
3622 4509 2.427453 ACATGAACGAAGCTACCGAGAT 59.573 45.455 14.27 1.76 0.00 2.75
3710 4597 9.762933 GATAGAGATTAATCTTTGAGCTCAAGT 57.237 33.333 27.02 15.57 37.25 3.16
3713 4600 8.728833 AGAGATTAATCTTTGAGCTCAAGTTTG 58.271 33.333 27.02 18.30 37.25 2.93
3846 4733 8.074613 AGGTGCCTTTTTCCCTTTATAAATAC 57.925 34.615 0.00 0.00 0.00 1.89
3847 4734 7.899172 AGGTGCCTTTTTCCCTTTATAAATACT 59.101 33.333 0.00 0.00 0.00 2.12
3848 4735 9.192642 GGTGCCTTTTTCCCTTTATAAATACTA 57.807 33.333 0.00 0.00 0.00 1.82
3850 4737 9.416284 TGCCTTTTTCCCTTTATAAATACTAGG 57.584 33.333 0.00 0.00 0.00 3.02
3851 4738 9.636789 GCCTTTTTCCCTTTATAAATACTAGGA 57.363 33.333 0.00 0.00 0.00 2.94
3864 4751 2.989422 ACTAGGAAAATTGCACGTGC 57.011 45.000 33.11 33.11 42.50 5.34
3865 4752 1.196808 ACTAGGAAAATTGCACGTGCG 59.803 47.619 33.22 18.05 45.83 5.34
3866 4753 1.196808 CTAGGAAAATTGCACGTGCGT 59.803 47.619 33.22 22.59 45.83 5.24
3867 4754 0.383949 AGGAAAATTGCACGTGCGTT 59.616 45.000 33.22 26.61 45.83 4.84
3868 4755 0.502275 GGAAAATTGCACGTGCGTTG 59.498 50.000 33.22 0.02 45.83 4.10
3869 4756 0.111748 GAAAATTGCACGTGCGTTGC 60.112 50.000 33.22 21.89 45.83 4.17
3870 4757 0.803768 AAAATTGCACGTGCGTTGCA 60.804 45.000 33.22 14.84 45.83 4.08
3872 4759 2.578178 TTGCACGTGCGTTGCAAC 60.578 55.556 33.22 19.89 42.65 4.17
3886 4773 3.501950 GTTGCAACGGAAGAAATCATCC 58.498 45.455 14.90 0.00 0.00 3.51
3887 4774 2.789213 TGCAACGGAAGAAATCATCCA 58.211 42.857 5.62 0.00 33.57 3.41
3888 4775 3.355378 TGCAACGGAAGAAATCATCCAT 58.645 40.909 5.62 0.00 33.57 3.41
3889 4776 3.129113 TGCAACGGAAGAAATCATCCATG 59.871 43.478 5.62 4.79 33.57 3.66
3890 4777 3.699067 CAACGGAAGAAATCATCCATGC 58.301 45.455 5.62 0.00 33.57 4.06
3891 4778 3.003394 ACGGAAGAAATCATCCATGCA 57.997 42.857 5.62 0.00 33.57 3.96
3892 4779 3.355378 ACGGAAGAAATCATCCATGCAA 58.645 40.909 5.62 0.00 33.57 4.08
3893 4780 3.129287 ACGGAAGAAATCATCCATGCAAC 59.871 43.478 5.62 0.00 33.57 4.17
3894 4781 3.489738 CGGAAGAAATCATCCATGCAACC 60.490 47.826 5.62 0.00 33.57 3.77
3895 4782 3.181472 GGAAGAAATCATCCATGCAACCC 60.181 47.826 0.00 0.00 34.11 4.11
3896 4783 3.104519 AGAAATCATCCATGCAACCCA 57.895 42.857 0.00 0.00 0.00 4.51
3897 4784 2.762327 AGAAATCATCCATGCAACCCAC 59.238 45.455 0.00 0.00 0.00 4.61
3898 4785 2.537633 AATCATCCATGCAACCCACT 57.462 45.000 0.00 0.00 0.00 4.00
3899 4786 2.537633 ATCATCCATGCAACCCACTT 57.462 45.000 0.00 0.00 0.00 3.16
3900 4787 1.548081 TCATCCATGCAACCCACTTG 58.452 50.000 0.00 0.00 0.00 3.16
3901 4788 1.203038 TCATCCATGCAACCCACTTGT 60.203 47.619 0.00 0.00 31.73 3.16
3902 4789 2.040947 TCATCCATGCAACCCACTTGTA 59.959 45.455 0.00 0.00 31.73 2.41
3903 4790 2.666272 TCCATGCAACCCACTTGTAA 57.334 45.000 0.00 0.00 31.73 2.41
3904 4791 3.168035 TCCATGCAACCCACTTGTAAT 57.832 42.857 0.00 0.00 31.73 1.89
3905 4792 3.505386 TCCATGCAACCCACTTGTAATT 58.495 40.909 0.00 0.00 31.73 1.40
3906 4793 4.667573 TCCATGCAACCCACTTGTAATTA 58.332 39.130 0.00 0.00 31.73 1.40
3907 4794 5.080337 TCCATGCAACCCACTTGTAATTAA 58.920 37.500 0.00 0.00 31.73 1.40
3908 4795 5.540337 TCCATGCAACCCACTTGTAATTAAA 59.460 36.000 0.00 0.00 31.73 1.52
3909 4796 6.042093 TCCATGCAACCCACTTGTAATTAAAA 59.958 34.615 0.00 0.00 31.73 1.52
3910 4797 6.368516 CCATGCAACCCACTTGTAATTAAAAG 59.631 38.462 13.01 13.01 31.73 2.27
3911 4798 6.716934 TGCAACCCACTTGTAATTAAAAGA 57.283 33.333 20.17 0.00 31.73 2.52
3912 4799 7.113658 TGCAACCCACTTGTAATTAAAAGAA 57.886 32.000 20.17 0.00 31.73 2.52
3913 4800 7.556844 TGCAACCCACTTGTAATTAAAAGAAA 58.443 30.769 20.17 0.00 31.73 2.52
3914 4801 8.041323 TGCAACCCACTTGTAATTAAAAGAAAA 58.959 29.630 20.17 0.00 31.73 2.29
3915 4802 8.332464 GCAACCCACTTGTAATTAAAAGAAAAC 58.668 33.333 20.17 1.91 31.73 2.43
3916 4803 9.372369 CAACCCACTTGTAATTAAAAGAAAACA 57.628 29.630 20.17 0.00 0.00 2.83
3917 4804 9.945904 AACCCACTTGTAATTAAAAGAAAACAA 57.054 25.926 20.17 4.47 0.00 2.83
3951 4838 9.933723 AAAATTTGAGATCTTTCCAATTACCTG 57.066 29.630 0.00 0.00 0.00 4.00
3952 4839 8.884124 AATTTGAGATCTTTCCAATTACCTGA 57.116 30.769 0.00 0.00 0.00 3.86
3953 4840 7.687941 TTTGAGATCTTTCCAATTACCTGAC 57.312 36.000 0.00 0.00 0.00 3.51
3954 4841 6.373005 TGAGATCTTTCCAATTACCTGACA 57.627 37.500 0.00 0.00 0.00 3.58
3955 4842 6.962182 TGAGATCTTTCCAATTACCTGACAT 58.038 36.000 0.00 0.00 0.00 3.06
3956 4843 6.825213 TGAGATCTTTCCAATTACCTGACATG 59.175 38.462 0.00 0.00 0.00 3.21
3957 4844 6.962182 AGATCTTTCCAATTACCTGACATGA 58.038 36.000 0.00 0.00 0.00 3.07
3958 4845 7.052873 AGATCTTTCCAATTACCTGACATGAG 58.947 38.462 0.00 0.00 0.00 2.90
3959 4846 6.373005 TCTTTCCAATTACCTGACATGAGA 57.627 37.500 0.00 0.00 0.00 3.27
3960 4847 6.778821 TCTTTCCAATTACCTGACATGAGAA 58.221 36.000 0.00 0.00 0.00 2.87
3961 4848 7.230747 TCTTTCCAATTACCTGACATGAGAAA 58.769 34.615 0.00 0.00 0.00 2.52
3962 4849 7.890127 TCTTTCCAATTACCTGACATGAGAAAT 59.110 33.333 0.00 0.00 0.00 2.17
3963 4850 8.421249 TTTCCAATTACCTGACATGAGAAATT 57.579 30.769 0.00 0.00 0.00 1.82
3964 4851 9.527157 TTTCCAATTACCTGACATGAGAAATTA 57.473 29.630 0.00 0.00 0.00 1.40
3965 4852 9.527157 TTCCAATTACCTGACATGAGAAATTAA 57.473 29.630 0.00 0.00 0.00 1.40
3966 4853 9.527157 TCCAATTACCTGACATGAGAAATTAAA 57.473 29.630 0.00 0.00 0.00 1.52
3980 4867 9.985730 ATGAGAAATTAAAATTCTTTCAGTGCA 57.014 25.926 7.94 0.00 37.26 4.57
3981 4868 9.248291 TGAGAAATTAAAATTCTTTCAGTGCAC 57.752 29.630 9.40 9.40 37.26 4.57
3982 4869 9.248291 GAGAAATTAAAATTCTTTCAGTGCACA 57.752 29.630 21.04 0.00 37.26 4.57
3983 4870 9.768662 AGAAATTAAAATTCTTTCAGTGCACAT 57.231 25.926 21.04 0.75 33.41 3.21
3988 4875 9.638239 TTAAAATTCTTTCAGTGCACATATTCC 57.362 29.630 21.04 0.00 0.00 3.01
3989 4876 4.944962 TTCTTTCAGTGCACATATTCCG 57.055 40.909 21.04 0.97 0.00 4.30
3990 4877 2.677836 TCTTTCAGTGCACATATTCCGC 59.322 45.455 21.04 0.00 0.00 5.54
3991 4878 2.106477 TTCAGTGCACATATTCCGCA 57.894 45.000 21.04 0.00 0.00 5.69
3992 4879 2.106477 TCAGTGCACATATTCCGCAA 57.894 45.000 21.04 0.00 37.41 4.85
3993 4880 2.431454 TCAGTGCACATATTCCGCAAA 58.569 42.857 21.04 0.00 37.41 3.68
3994 4881 2.419673 TCAGTGCACATATTCCGCAAAG 59.580 45.455 21.04 0.00 37.41 2.77
3995 4882 1.133025 AGTGCACATATTCCGCAAAGC 59.867 47.619 21.04 0.00 37.41 3.51
3996 4883 1.135431 GTGCACATATTCCGCAAAGCA 60.135 47.619 13.17 0.00 37.41 3.91
3997 4884 1.543358 TGCACATATTCCGCAAAGCAA 59.457 42.857 0.00 0.00 31.46 3.91
3998 4885 2.166050 TGCACATATTCCGCAAAGCAAT 59.834 40.909 0.00 0.00 31.46 3.56
3999 4886 3.189285 GCACATATTCCGCAAAGCAATT 58.811 40.909 0.00 0.00 0.00 2.32
4000 4887 4.142293 TGCACATATTCCGCAAAGCAATTA 60.142 37.500 0.00 0.00 31.46 1.40
4001 4888 4.803088 GCACATATTCCGCAAAGCAATTAA 59.197 37.500 0.00 0.00 0.00 1.40
4002 4889 5.290643 GCACATATTCCGCAAAGCAATTAAA 59.709 36.000 0.00 0.00 0.00 1.52
4003 4890 6.508404 GCACATATTCCGCAAAGCAATTAAAG 60.508 38.462 0.00 0.00 0.00 1.85
4004 4891 6.531240 CACATATTCCGCAAAGCAATTAAAGT 59.469 34.615 0.00 0.00 0.00 2.66
4005 4892 6.531240 ACATATTCCGCAAAGCAATTAAAGTG 59.469 34.615 0.00 0.00 0.00 3.16
4006 4893 4.576216 TTCCGCAAAGCAATTAAAGTGA 57.424 36.364 0.00 0.00 0.00 3.41
4007 4894 4.576216 TCCGCAAAGCAATTAAAGTGAA 57.424 36.364 0.00 0.00 0.00 3.18
4008 4895 4.545610 TCCGCAAAGCAATTAAAGTGAAG 58.454 39.130 0.00 0.00 0.00 3.02
4009 4896 3.121778 CCGCAAAGCAATTAAAGTGAAGC 59.878 43.478 0.00 0.00 0.00 3.86
4010 4897 3.983344 CGCAAAGCAATTAAAGTGAAGCT 59.017 39.130 0.00 0.00 0.00 3.74
4011 4898 4.143473 CGCAAAGCAATTAAAGTGAAGCTG 60.143 41.667 0.00 0.00 31.88 4.24
4012 4899 4.984161 GCAAAGCAATTAAAGTGAAGCTGA 59.016 37.500 0.00 0.00 31.88 4.26
4013 4900 5.463061 GCAAAGCAATTAAAGTGAAGCTGAA 59.537 36.000 0.00 0.00 31.88 3.02
4014 4901 6.562825 GCAAAGCAATTAAAGTGAAGCTGAAC 60.563 38.462 0.00 0.00 31.88 3.18
4015 4902 5.772825 AGCAATTAAAGTGAAGCTGAACA 57.227 34.783 0.00 0.00 0.00 3.18
4016 4903 6.336842 AGCAATTAAAGTGAAGCTGAACAT 57.663 33.333 0.00 0.00 0.00 2.71
4017 4904 6.752168 AGCAATTAAAGTGAAGCTGAACATT 58.248 32.000 0.00 0.00 0.00 2.71
4018 4905 6.865205 AGCAATTAAAGTGAAGCTGAACATTC 59.135 34.615 0.00 0.00 0.00 2.67
4019 4906 6.089954 GCAATTAAAGTGAAGCTGAACATTCC 59.910 38.462 0.00 0.00 0.00 3.01
4020 4907 6.899393 ATTAAAGTGAAGCTGAACATTCCA 57.101 33.333 0.00 0.00 0.00 3.53
4021 4908 6.707440 TTAAAGTGAAGCTGAACATTCCAA 57.293 33.333 0.00 0.00 0.00 3.53
4022 4909 4.574599 AAGTGAAGCTGAACATTCCAAC 57.425 40.909 0.00 0.00 0.00 3.77
4023 4910 3.825328 AGTGAAGCTGAACATTCCAACT 58.175 40.909 0.00 0.00 0.00 3.16
4024 4911 3.817647 AGTGAAGCTGAACATTCCAACTC 59.182 43.478 0.00 0.00 0.00 3.01
4025 4912 3.817647 GTGAAGCTGAACATTCCAACTCT 59.182 43.478 0.00 0.00 0.00 3.24
4026 4913 4.997395 GTGAAGCTGAACATTCCAACTCTA 59.003 41.667 0.00 0.00 0.00 2.43
4027 4914 4.997395 TGAAGCTGAACATTCCAACTCTAC 59.003 41.667 0.00 0.00 0.00 2.59
4028 4915 4.623932 AGCTGAACATTCCAACTCTACA 57.376 40.909 0.00 0.00 0.00 2.74
4029 4916 4.973168 AGCTGAACATTCCAACTCTACAA 58.027 39.130 0.00 0.00 0.00 2.41
4030 4917 4.999950 AGCTGAACATTCCAACTCTACAAG 59.000 41.667 0.00 0.00 0.00 3.16
4031 4918 4.997395 GCTGAACATTCCAACTCTACAAGA 59.003 41.667 0.00 0.00 0.00 3.02
4032 4919 5.645497 GCTGAACATTCCAACTCTACAAGAT 59.355 40.000 0.00 0.00 0.00 2.40
4033 4920 6.183360 GCTGAACATTCCAACTCTACAAGATC 60.183 42.308 0.00 0.00 0.00 2.75
4034 4921 6.173339 TGAACATTCCAACTCTACAAGATCC 58.827 40.000 0.00 0.00 0.00 3.36
4035 4922 5.104259 ACATTCCAACTCTACAAGATCCC 57.896 43.478 0.00 0.00 0.00 3.85
4036 4923 4.785376 ACATTCCAACTCTACAAGATCCCT 59.215 41.667 0.00 0.00 0.00 4.20
4037 4924 5.964477 ACATTCCAACTCTACAAGATCCCTA 59.036 40.000 0.00 0.00 0.00 3.53
4038 4925 6.617371 ACATTCCAACTCTACAAGATCCCTAT 59.383 38.462 0.00 0.00 0.00 2.57
4039 4926 7.789831 ACATTCCAACTCTACAAGATCCCTATA 59.210 37.037 0.00 0.00 0.00 1.31
4040 4927 7.598759 TTCCAACTCTACAAGATCCCTATAC 57.401 40.000 0.00 0.00 0.00 1.47
4041 4928 5.768662 TCCAACTCTACAAGATCCCTATACG 59.231 44.000 0.00 0.00 0.00 3.06
4042 4929 5.535406 CCAACTCTACAAGATCCCTATACGT 59.465 44.000 0.00 0.00 0.00 3.57
4043 4930 6.439599 CAACTCTACAAGATCCCTATACGTG 58.560 44.000 0.00 0.00 0.00 4.49
4044 4931 4.519730 ACTCTACAAGATCCCTATACGTGC 59.480 45.833 0.00 0.00 0.00 5.34
4045 4932 4.466827 TCTACAAGATCCCTATACGTGCA 58.533 43.478 0.00 0.00 0.00 4.57
4046 4933 3.735237 ACAAGATCCCTATACGTGCAG 57.265 47.619 0.00 0.00 0.00 4.41
4047 4934 3.296854 ACAAGATCCCTATACGTGCAGA 58.703 45.455 0.00 0.00 0.00 4.26
4048 4935 3.704566 ACAAGATCCCTATACGTGCAGAA 59.295 43.478 0.00 0.00 0.00 3.02
4049 4936 4.051922 CAAGATCCCTATACGTGCAGAAC 58.948 47.826 0.00 0.00 0.00 3.01
4050 4937 3.296854 AGATCCCTATACGTGCAGAACA 58.703 45.455 0.00 0.00 0.00 3.18
4051 4938 3.319405 AGATCCCTATACGTGCAGAACAG 59.681 47.826 0.00 0.00 0.00 3.16
4052 4939 2.730382 TCCCTATACGTGCAGAACAGA 58.270 47.619 0.00 0.00 0.00 3.41
4053 4940 3.093814 TCCCTATACGTGCAGAACAGAA 58.906 45.455 0.00 0.00 0.00 3.02
4054 4941 3.119245 TCCCTATACGTGCAGAACAGAAC 60.119 47.826 0.00 0.00 0.00 3.01
4055 4942 3.368013 CCCTATACGTGCAGAACAGAACA 60.368 47.826 0.00 0.00 0.00 3.18
4056 4943 3.612860 CCTATACGTGCAGAACAGAACAC 59.387 47.826 0.00 0.00 0.00 3.32
4057 4944 2.882927 TACGTGCAGAACAGAACACT 57.117 45.000 0.00 0.00 0.00 3.55
4058 4945 1.571919 ACGTGCAGAACAGAACACTC 58.428 50.000 0.00 0.00 0.00 3.51
4059 4946 1.134818 ACGTGCAGAACAGAACACTCA 60.135 47.619 0.00 0.00 0.00 3.41
4060 4947 1.258982 CGTGCAGAACAGAACACTCAC 59.741 52.381 0.00 0.00 0.00 3.51
4061 4948 2.555199 GTGCAGAACAGAACACTCACT 58.445 47.619 0.00 0.00 0.00 3.41
4062 4949 2.286294 GTGCAGAACAGAACACTCACTG 59.714 50.000 0.00 0.00 39.65 3.66
4063 4950 1.869767 GCAGAACAGAACACTCACTGG 59.130 52.381 0.00 0.00 38.30 4.00
4064 4951 1.869767 CAGAACAGAACACTCACTGGC 59.130 52.381 0.00 0.00 38.30 4.85
4065 4952 0.861837 GAACAGAACACTCACTGGCG 59.138 55.000 0.00 0.00 38.30 5.69
4066 4953 0.178068 AACAGAACACTCACTGGCGT 59.822 50.000 0.00 0.00 38.30 5.68
4067 4954 0.178068 ACAGAACACTCACTGGCGTT 59.822 50.000 0.00 0.00 38.30 4.84
4068 4955 0.583438 CAGAACACTCACTGGCGTTG 59.417 55.000 0.00 0.00 0.00 4.10
4069 4956 0.178068 AGAACACTCACTGGCGTTGT 59.822 50.000 0.00 0.00 0.00 3.32
4070 4957 0.304705 GAACACTCACTGGCGTTGTG 59.695 55.000 0.00 0.00 36.82 3.33
4071 4958 1.095228 AACACTCACTGGCGTTGTGG 61.095 55.000 0.00 5.41 36.21 4.17
4072 4959 2.591715 ACTCACTGGCGTTGTGGC 60.592 61.111 5.51 0.00 45.12 5.01
4073 4960 2.281070 CTCACTGGCGTTGTGGCT 60.281 61.111 5.51 0.00 45.14 4.75
4074 4961 1.005037 CTCACTGGCGTTGTGGCTA 60.005 57.895 5.51 0.00 45.14 3.93
4075 4962 1.005037 TCACTGGCGTTGTGGCTAG 60.005 57.895 5.51 0.00 45.86 3.42
4076 4963 2.358737 ACTGGCGTTGTGGCTAGC 60.359 61.111 6.04 6.04 44.45 3.42
4077 4964 2.046892 CTGGCGTTGTGGCTAGCT 60.047 61.111 15.72 0.00 45.14 3.32
4078 4965 2.047274 TGGCGTTGTGGCTAGCTC 60.047 61.111 15.72 8.97 45.14 4.09
4079 4966 2.047274 GGCGTTGTGGCTAGCTCA 60.047 61.111 15.72 11.54 40.72 4.26
4080 4967 1.450312 GGCGTTGTGGCTAGCTCAT 60.450 57.895 15.72 0.00 40.72 2.90
4081 4968 1.026718 GGCGTTGTGGCTAGCTCATT 61.027 55.000 15.72 0.00 40.72 2.57
4082 4969 0.375106 GCGTTGTGGCTAGCTCATTC 59.625 55.000 15.72 9.48 0.00 2.67
4083 4970 2.009042 GCGTTGTGGCTAGCTCATTCT 61.009 52.381 15.72 0.00 0.00 2.40
4084 4971 2.738643 GCGTTGTGGCTAGCTCATTCTA 60.739 50.000 15.72 0.00 0.00 2.10
4085 4972 2.860735 CGTTGTGGCTAGCTCATTCTAC 59.139 50.000 15.72 8.39 0.00 2.59
4086 4973 3.676049 CGTTGTGGCTAGCTCATTCTACA 60.676 47.826 15.72 6.19 0.00 2.74
4087 4974 4.253685 GTTGTGGCTAGCTCATTCTACAA 58.746 43.478 15.72 11.29 0.00 2.41
4088 4975 4.551702 TGTGGCTAGCTCATTCTACAAA 57.448 40.909 15.72 0.00 0.00 2.83
4089 4976 4.253685 TGTGGCTAGCTCATTCTACAAAC 58.746 43.478 15.72 0.00 0.00 2.93
4090 4977 4.253685 GTGGCTAGCTCATTCTACAAACA 58.746 43.478 15.72 0.00 0.00 2.83
4091 4978 4.695455 GTGGCTAGCTCATTCTACAAACAA 59.305 41.667 15.72 0.00 0.00 2.83
4092 4979 5.355350 GTGGCTAGCTCATTCTACAAACAAT 59.645 40.000 15.72 0.00 0.00 2.71
4093 4980 5.586243 TGGCTAGCTCATTCTACAAACAATC 59.414 40.000 15.72 0.00 0.00 2.67
4094 4981 5.819901 GGCTAGCTCATTCTACAAACAATCT 59.180 40.000 15.72 0.00 0.00 2.40
4095 4982 6.238320 GGCTAGCTCATTCTACAAACAATCTG 60.238 42.308 15.72 0.00 0.00 2.90
4096 4983 6.314896 GCTAGCTCATTCTACAAACAATCTGT 59.685 38.462 7.70 0.00 0.00 3.41
4097 4984 7.148340 GCTAGCTCATTCTACAAACAATCTGTT 60.148 37.037 7.70 0.00 43.41 3.16
4098 4985 6.906659 AGCTCATTCTACAAACAATCTGTTG 58.093 36.000 0.00 0.00 40.14 3.33
4099 4986 6.072286 AGCTCATTCTACAAACAATCTGTTGG 60.072 38.462 0.00 0.00 40.14 3.77
4100 4987 6.294176 GCTCATTCTACAAACAATCTGTTGGT 60.294 38.462 5.00 5.00 45.73 3.67
4101 4988 7.202016 TCATTCTACAAACAATCTGTTGGTC 57.798 36.000 2.84 0.00 40.29 4.02
4102 4989 6.206634 TCATTCTACAAACAATCTGTTGGTCC 59.793 38.462 2.84 0.00 40.29 4.46
4103 4990 4.394729 TCTACAAACAATCTGTTGGTCCC 58.605 43.478 2.84 0.00 40.29 4.46
4104 4991 3.025322 ACAAACAATCTGTTGGTCCCA 57.975 42.857 0.00 0.00 40.29 4.37
4105 4992 2.958355 ACAAACAATCTGTTGGTCCCAG 59.042 45.455 0.00 0.00 40.29 4.45
4106 4993 2.292828 AACAATCTGTTGGTCCCAGG 57.707 50.000 0.00 0.00 39.45 4.45
4107 4994 1.149101 ACAATCTGTTGGTCCCAGGT 58.851 50.000 0.00 0.00 39.70 4.00
4108 4995 1.499007 ACAATCTGTTGGTCCCAGGTT 59.501 47.619 0.00 0.00 39.70 3.50
4109 4996 2.162681 CAATCTGTTGGTCCCAGGTTC 58.837 52.381 0.00 0.00 30.96 3.62
4110 4997 1.444933 ATCTGTTGGTCCCAGGTTCA 58.555 50.000 0.00 0.00 0.00 3.18
4111 4998 1.217916 TCTGTTGGTCCCAGGTTCAA 58.782 50.000 0.00 0.00 0.00 2.69
4112 4999 1.780309 TCTGTTGGTCCCAGGTTCAAT 59.220 47.619 0.00 0.00 0.00 2.57
4113 5000 2.162681 CTGTTGGTCCCAGGTTCAATC 58.837 52.381 0.00 0.00 0.00 2.67
4114 5001 1.165270 GTTGGTCCCAGGTTCAATCG 58.835 55.000 0.00 0.00 0.00 3.34
4115 5002 0.608035 TTGGTCCCAGGTTCAATCGC 60.608 55.000 0.00 0.00 0.00 4.58
4116 5003 2.106683 GGTCCCAGGTTCAATCGCG 61.107 63.158 0.00 0.00 0.00 5.87
4117 5004 2.106683 GTCCCAGGTTCAATCGCGG 61.107 63.158 6.13 0.00 0.00 6.46
4118 5005 3.508840 CCCAGGTTCAATCGCGGC 61.509 66.667 6.13 0.00 0.00 6.53
4119 5006 2.436646 CCAGGTTCAATCGCGGCT 60.437 61.111 6.13 0.00 0.00 5.52
4120 5007 2.040544 CCAGGTTCAATCGCGGCTT 61.041 57.895 6.13 0.00 0.00 4.35
4121 5008 0.742990 CCAGGTTCAATCGCGGCTTA 60.743 55.000 6.13 0.00 0.00 3.09
4122 5009 0.652592 CAGGTTCAATCGCGGCTTAG 59.347 55.000 6.13 0.00 0.00 2.18
4123 5010 0.535335 AGGTTCAATCGCGGCTTAGA 59.465 50.000 6.13 0.00 0.00 2.10
4124 5011 0.651031 GGTTCAATCGCGGCTTAGAC 59.349 55.000 6.13 2.92 0.00 2.59
4125 5012 1.355971 GTTCAATCGCGGCTTAGACA 58.644 50.000 6.13 0.00 0.00 3.41
4126 5013 1.933853 GTTCAATCGCGGCTTAGACAT 59.066 47.619 6.13 0.00 0.00 3.06
4127 5014 2.309528 TCAATCGCGGCTTAGACATT 57.690 45.000 6.13 0.00 0.00 2.71
4128 5015 3.446310 TCAATCGCGGCTTAGACATTA 57.554 42.857 6.13 0.00 0.00 1.90
4129 5016 3.120792 TCAATCGCGGCTTAGACATTAC 58.879 45.455 6.13 0.00 0.00 1.89
4130 5017 3.123804 CAATCGCGGCTTAGACATTACT 58.876 45.455 6.13 0.00 0.00 2.24
4131 5018 2.203800 TCGCGGCTTAGACATTACTG 57.796 50.000 6.13 0.00 0.00 2.74
4132 5019 1.475280 TCGCGGCTTAGACATTACTGT 59.525 47.619 6.13 0.00 38.67 3.55
4133 5020 2.094390 TCGCGGCTTAGACATTACTGTT 60.094 45.455 6.13 0.00 35.14 3.16
4134 5021 2.281762 CGCGGCTTAGACATTACTGTTC 59.718 50.000 0.00 0.00 35.14 3.18
4135 5022 3.259064 GCGGCTTAGACATTACTGTTCA 58.741 45.455 0.00 0.00 35.14 3.18
4136 5023 3.871594 GCGGCTTAGACATTACTGTTCAT 59.128 43.478 0.00 0.00 35.14 2.57
4137 5024 4.260375 GCGGCTTAGACATTACTGTTCATG 60.260 45.833 0.00 0.00 35.14 3.07
4138 5025 4.271049 CGGCTTAGACATTACTGTTCATGG 59.729 45.833 0.00 0.00 35.14 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.757947 AGATTCACACAAAGTTTGTCCATTTG 59.242 34.615 18.34 8.92 43.23 2.32
1 2 6.877236 AGATTCACACAAAGTTTGTCCATTT 58.123 32.000 18.34 4.23 43.23 2.32
2 3 6.469782 AGATTCACACAAAGTTTGTCCATT 57.530 33.333 18.34 3.20 43.23 3.16
3 4 6.469782 AAGATTCACACAAAGTTTGTCCAT 57.530 33.333 18.34 8.00 43.23 3.41
4 5 5.913137 AAGATTCACACAAAGTTTGTCCA 57.087 34.783 18.34 2.72 43.23 4.02
55 192 1.069049 ACTTTGCTGCAACATGGTTCC 59.931 47.619 15.72 0.00 0.00 3.62
65 202 5.472148 CCTTTCATATTTCACTTTGCTGCA 58.528 37.500 0.00 0.00 0.00 4.41
76 213 6.192970 TCCTCAGATCCCCTTTCATATTTC 57.807 41.667 0.00 0.00 0.00 2.17
91 228 3.434309 CCACAAATGGGTTTCCTCAGAT 58.566 45.455 0.00 0.00 43.04 2.90
120 257 4.404715 GGAGGGAGTACTATGCAAGTTGTA 59.595 45.833 4.48 0.00 39.80 2.41
136 273 4.210331 CACTTATTTTGGGATGGAGGGAG 58.790 47.826 0.00 0.00 0.00 4.30
137 274 3.596046 ACACTTATTTTGGGATGGAGGGA 59.404 43.478 0.00 0.00 0.00 4.20
138 275 3.954258 GACACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
139 276 4.860022 AGACACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
140 277 5.500234 TGAGACACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
141 278 5.512942 TGAGACACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
142 279 5.711976 AGTTGAGACACTTATTTTGGGATGG 59.288 40.000 0.00 0.00 0.00 3.51
143 280 6.824305 AGTTGAGACACTTATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
144 281 7.287696 ACAAAGTTGAGACACTTATTTTGGGAT 59.712 33.333 0.00 0.00 35.87 3.85
145 282 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
146 283 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
147 284 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
150 287 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
151 288 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
152 289 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
153 290 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
154 291 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
155 292 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
156 293 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
157 294 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
158 295 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
182 319 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
183 320 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
184 321 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
185 322 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
186 323 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
187 324 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
188 325 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
189 326 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
190 327 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
191 328 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
192 329 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
193 330 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
194 331 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
195 332 6.539173 TCCCAAAATAAGTGTCTTGAGCTTA 58.461 36.000 0.00 0.00 0.00 3.09
196 333 5.385198 TCCCAAAATAAGTGTCTTGAGCTT 58.615 37.500 0.00 0.00 0.00 3.74
197 334 4.985538 TCCCAAAATAAGTGTCTTGAGCT 58.014 39.130 0.00 0.00 0.00 4.09
198 335 5.393461 CCATCCCAAAATAAGTGTCTTGAGC 60.393 44.000 0.00 0.00 0.00 4.26
199 336 5.945784 TCCATCCCAAAATAAGTGTCTTGAG 59.054 40.000 0.00 0.00 0.00 3.02
200 337 5.886609 TCCATCCCAAAATAAGTGTCTTGA 58.113 37.500 0.00 0.00 0.00 3.02
201 338 5.126061 CCTCCATCCCAAAATAAGTGTCTTG 59.874 44.000 0.00 0.00 0.00 3.02
202 339 5.264395 CCTCCATCCCAAAATAAGTGTCTT 58.736 41.667 0.00 0.00 0.00 3.01
203 340 4.325344 CCCTCCATCCCAAAATAAGTGTCT 60.325 45.833 0.00 0.00 0.00 3.41
204 341 3.954258 CCCTCCATCCCAAAATAAGTGTC 59.046 47.826 0.00 0.00 0.00 3.67
205 342 3.596046 TCCCTCCATCCCAAAATAAGTGT 59.404 43.478 0.00 0.00 0.00 3.55
206 343 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
207 344 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
208 345 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
209 346 6.606241 ATTACTCCCTCCATCCCAAAATAA 57.394 37.500 0.00 0.00 0.00 1.40
210 347 7.715267 TTATTACTCCCTCCATCCCAAAATA 57.285 36.000 0.00 0.00 0.00 1.40
211 348 6.606241 TTATTACTCCCTCCATCCCAAAAT 57.394 37.500 0.00 0.00 0.00 1.82
212 349 6.218730 TCTTTATTACTCCCTCCATCCCAAAA 59.781 38.462 0.00 0.00 0.00 2.44
213 350 5.734140 TCTTTATTACTCCCTCCATCCCAAA 59.266 40.000 0.00 0.00 0.00 3.28
214 351 5.293643 TCTTTATTACTCCCTCCATCCCAA 58.706 41.667 0.00 0.00 0.00 4.12
215 352 4.903149 TCTTTATTACTCCCTCCATCCCA 58.097 43.478 0.00 0.00 0.00 4.37
216 353 5.607171 TCTTCTTTATTACTCCCTCCATCCC 59.393 44.000 0.00 0.00 0.00 3.85
217 354 6.749036 TCTTCTTTATTACTCCCTCCATCC 57.251 41.667 0.00 0.00 0.00 3.51
218 355 7.797062 AGTTCTTCTTTATTACTCCCTCCATC 58.203 38.462 0.00 0.00 0.00 3.51
219 356 7.757242 AGTTCTTCTTTATTACTCCCTCCAT 57.243 36.000 0.00 0.00 0.00 3.41
220 357 7.899709 ACTAGTTCTTCTTTATTACTCCCTCCA 59.100 37.037 0.00 0.00 0.00 3.86
221 358 8.308851 ACTAGTTCTTCTTTATTACTCCCTCC 57.691 38.462 0.00 0.00 0.00 4.30
223 360 9.945904 CAAACTAGTTCTTCTTTATTACTCCCT 57.054 33.333 8.95 0.00 0.00 4.20
224 361 8.666573 GCAAACTAGTTCTTCTTTATTACTCCC 58.333 37.037 8.95 0.00 0.00 4.30
225 362 9.438228 AGCAAACTAGTTCTTCTTTATTACTCC 57.562 33.333 8.95 0.00 0.00 3.85
237 374 3.498661 CCCCCAGAAGCAAACTAGTTCTT 60.499 47.826 8.95 8.87 0.00 2.52
243 380 1.663911 TAGCCCCCAGAAGCAAACTA 58.336 50.000 0.00 0.00 0.00 2.24
302 439 6.369890 TGCAGAAACATGTAGATTGAGAAGTC 59.630 38.462 0.00 0.00 0.00 3.01
303 440 6.233434 TGCAGAAACATGTAGATTGAGAAGT 58.767 36.000 0.00 0.00 0.00 3.01
328 465 1.153745 GAGCAGAAGACGGTGCGAT 60.154 57.895 0.00 0.00 44.78 4.58
333 470 1.291588 CAGCAGAGCAGAAGACGGT 59.708 57.895 0.00 0.00 0.00 4.83
365 502 2.158445 GCAGGAGTATAGGAGGAGGACA 60.158 54.545 0.00 0.00 0.00 4.02
396 533 7.585579 TCCATTTGCAAGCATCAAGATATAA 57.414 32.000 0.00 0.00 0.00 0.98
400 537 6.474140 TTATCCATTTGCAAGCATCAAGAT 57.526 33.333 0.00 0.08 0.00 2.40
465 602 4.101430 AGTTTGCTTTGACATGGTTCCATT 59.899 37.500 1.11 0.00 0.00 3.16
480 617 3.070015 CCCCTTTCATTGTCAGTTTGCTT 59.930 43.478 0.00 0.00 0.00 3.91
654 1283 3.993658 AGGGTATGTATCACCTCTGGA 57.006 47.619 0.00 0.00 36.25 3.86
669 1298 7.285858 GCCATAAATAACACCAAACATAGGGTA 59.714 37.037 0.00 0.00 35.09 3.69
799 1439 3.301794 TTGACCAGCATGCAGGAATAT 57.698 42.857 33.30 12.83 31.97 1.28
848 1488 9.689976 TCGTGCAATATCATAATTAAAAATGGG 57.310 29.630 0.00 0.00 0.00 4.00
872 1512 6.444633 AGGTAATATCACAACTCGGTTATCG 58.555 40.000 0.00 0.00 40.90 2.92
913 1553 8.314751 GGATACAAAGCTTTAGCAGGATAGATA 58.685 37.037 12.25 0.00 45.16 1.98
991 1631 4.497006 CGAAGATGATGCCATTTCTGGTTC 60.497 45.833 0.00 0.00 45.10 3.62
1092 1732 1.384191 GGGGCCTGATTGTGGAAGT 59.616 57.895 0.84 0.00 0.00 3.01
1298 1939 9.720667 CTTCCAAAACAAAATTTCAAGATTTCC 57.279 29.630 0.00 0.00 0.00 3.13
1311 1952 7.931948 TGTTCCTTTGTAACTTCCAAAACAAAA 59.068 29.630 0.00 0.00 40.28 2.44
1455 2097 4.377897 ACTATTCTTATACCAGCCAACGC 58.622 43.478 0.00 0.00 0.00 4.84
1456 2098 5.844004 AGACTATTCTTATACCAGCCAACG 58.156 41.667 0.00 0.00 0.00 4.10
1457 2099 7.868415 CACTAGACTATTCTTATACCAGCCAAC 59.132 40.741 0.00 0.00 32.75 3.77
1459 2101 7.295340 TCACTAGACTATTCTTATACCAGCCA 58.705 38.462 0.00 0.00 32.75 4.75
1460 2102 7.762588 TCACTAGACTATTCTTATACCAGCC 57.237 40.000 0.00 0.00 32.75 4.85
1490 2209 0.884704 TCTTTGACTGTGCGAAGGGC 60.885 55.000 0.00 0.00 43.96 5.19
1492 2211 2.807967 TGATTCTTTGACTGTGCGAAGG 59.192 45.455 0.00 0.00 31.49 3.46
1521 2308 4.502259 CCTCTTCCCTATACTGCACACATC 60.502 50.000 0.00 0.00 0.00 3.06
1575 2362 5.700832 TGAGGTTCTACTAGCAACACATTTG 59.299 40.000 0.00 0.00 0.00 2.32
1599 2386 1.689233 TCCGGCAGCTCCCAACTAT 60.689 57.895 0.00 0.00 0.00 2.12
1675 2462 2.031870 CCCCTATTTTAGCCTTGTGCC 58.968 52.381 0.00 0.00 42.71 5.01
1684 2471 5.191921 GTCCTATCCCCATCCCCTATTTTAG 59.808 48.000 0.00 0.00 0.00 1.85
1708 2495 3.381590 GCCTCTTGCCCCTAATTTACTTG 59.618 47.826 0.00 0.00 0.00 3.16
1739 2526 6.260870 TGTTATCTTTTCGGCAAGCAATTA 57.739 33.333 0.00 0.00 0.00 1.40
1767 2554 8.815189 GTTAATTGTTAGCAGCCTACTACTTAC 58.185 37.037 0.00 0.00 0.00 2.34
1775 2562 5.566469 AGTTGGTTAATTGTTAGCAGCCTA 58.434 37.500 0.00 0.00 0.00 3.93
1776 2563 4.407365 AGTTGGTTAATTGTTAGCAGCCT 58.593 39.130 0.00 0.00 0.00 4.58
1946 2740 4.202151 ACAGGTGCAGAAACAAAAATCTCC 60.202 41.667 0.00 0.00 0.00 3.71
1950 2744 6.403866 TCATACAGGTGCAGAAACAAAAAT 57.596 33.333 0.00 0.00 0.00 1.82
1957 2752 7.936496 TCAATTTATCATACAGGTGCAGAAA 57.064 32.000 0.00 0.00 0.00 2.52
2068 2863 1.002033 CTCCTTGTCAGTGCTGCAAAC 60.002 52.381 2.77 3.96 0.00 2.93
2191 2988 6.491383 AGACCACTATAGGTTCAGTACTGAA 58.509 40.000 30.07 30.07 46.27 3.02
2284 3081 7.298122 ACTTACAATGCTAATCTGAACAAACG 58.702 34.615 0.00 0.00 0.00 3.60
2377 3179 4.377897 CAACTCTGCTCATATCATCAGCA 58.622 43.478 0.00 0.00 40.90 4.41
2573 3375 5.067674 TGCAAGTAATAATGGGATGAACAGC 59.932 40.000 0.00 0.00 0.00 4.40
2627 3430 6.403866 ACACAAATGCTGGTGATTTAAGAA 57.596 33.333 0.00 0.00 38.38 2.52
2628 3431 6.939730 TCTACACAAATGCTGGTGATTTAAGA 59.060 34.615 0.00 0.00 38.38 2.10
2629 3432 7.144722 TCTACACAAATGCTGGTGATTTAAG 57.855 36.000 0.00 0.00 38.38 1.85
2630 3433 7.392953 TCATCTACACAAATGCTGGTGATTTAA 59.607 33.333 0.00 0.00 38.38 1.52
2860 3668 2.162208 TGCGACATGGAGAAAAGCAATC 59.838 45.455 0.00 0.00 0.00 2.67
2951 3762 7.215719 TCCACGTGGATAGAACTAATAGATG 57.784 40.000 33.23 1.09 39.78 2.90
2967 3778 0.168788 GTCAATGCACATCCACGTGG 59.831 55.000 29.26 29.26 37.37 4.94
2987 3798 0.539051 CTGAATCAAGAGAGCCCCGT 59.461 55.000 0.00 0.00 0.00 5.28
2990 3801 0.107945 ACGCTGAATCAAGAGAGCCC 60.108 55.000 0.00 0.00 0.00 5.19
2991 3802 1.005340 CACGCTGAATCAAGAGAGCC 58.995 55.000 0.00 0.00 0.00 4.70
2992 3803 1.392853 CACACGCTGAATCAAGAGAGC 59.607 52.381 0.00 0.00 0.00 4.09
3154 3967 2.202349 GATGCGCTGAACAACGGC 60.202 61.111 9.73 0.00 46.43 5.68
3165 3978 2.847254 GAGTATCAAACAAGCGATGCGC 60.847 50.000 0.00 0.00 44.76 6.09
3187 4000 1.858091 AGAGACTGCACACTTCAACG 58.142 50.000 0.00 0.00 0.00 4.10
3235 4048 6.016943 CGTTCCAAACACTATAAAAAGGACCA 60.017 38.462 0.00 0.00 0.00 4.02
3282 4101 1.589993 CATACGCCAGAGCCTCACG 60.590 63.158 0.00 0.00 34.57 4.35
3296 4115 6.017934 CCACACACAGATATTTGTAGGCATAC 60.018 42.308 0.53 0.53 0.00 2.39
3303 4122 7.815641 CAAATGTCCACACACAGATATTTGTA 58.184 34.615 11.68 0.00 42.19 2.41
3325 4144 2.955660 CCAGACTTACAAAGGCCACAAA 59.044 45.455 5.01 0.00 37.17 2.83
3380 4203 6.041182 ACAATGGAAAAGGGTAGGTAAAACAC 59.959 38.462 0.00 0.00 0.00 3.32
3383 4206 6.720748 GGTACAATGGAAAAGGGTAGGTAAAA 59.279 38.462 0.00 0.00 0.00 1.52
3394 4217 3.609175 CGCACACTGGTACAATGGAAAAG 60.609 47.826 0.00 0.00 41.33 2.27
3408 4231 0.933973 TTGCAAAATCGCGCACACTG 60.934 50.000 8.75 0.00 38.00 3.66
3425 4248 2.746269 CACCCAAGCACAAACAGATTG 58.254 47.619 0.00 0.00 44.95 2.67
3455 4278 0.469070 TTGCAATGCAAACTGCCCTT 59.531 45.000 19.21 0.00 45.96 3.95
3509 4332 1.608590 CGGACCATCTTGCAACAAGTT 59.391 47.619 0.00 0.00 0.00 2.66
3518 4341 2.031157 GTGAAACCAACGGACCATCTTG 60.031 50.000 0.00 0.00 0.00 3.02
3545 4368 3.198635 CCTTGATATCAGACGGGGCATAT 59.801 47.826 5.39 0.00 0.00 1.78
3546 4369 2.567169 CCTTGATATCAGACGGGGCATA 59.433 50.000 5.39 0.00 0.00 3.14
3680 4567 8.900983 AGCTCAAAGATTAATCTCTATCCAAC 57.099 34.615 18.19 4.44 35.76 3.77
3687 4574 8.728833 CAAACTTGAGCTCAAAGATTAATCTCT 58.271 33.333 28.16 10.46 35.76 3.10
3821 4708 7.899172 AGTATTTATAAAGGGAAAAAGGCACCT 59.101 33.333 3.94 0.00 34.04 4.00
3822 4709 8.074613 AGTATTTATAAAGGGAAAAAGGCACC 57.925 34.615 3.94 0.00 0.00 5.01
3846 4733 1.196808 ACGCACGTGCAATTTTCCTAG 59.803 47.619 37.03 20.16 42.21 3.02
3847 4734 1.231221 ACGCACGTGCAATTTTCCTA 58.769 45.000 37.03 0.00 42.21 2.94
3848 4735 0.383949 AACGCACGTGCAATTTTCCT 59.616 45.000 37.03 9.05 42.21 3.36
3849 4736 0.502275 CAACGCACGTGCAATTTTCC 59.498 50.000 37.03 8.37 42.21 3.13
3850 4737 0.111748 GCAACGCACGTGCAATTTTC 60.112 50.000 37.03 18.62 42.21 2.29
3851 4738 0.803768 TGCAACGCACGTGCAATTTT 60.804 45.000 37.03 21.72 42.21 1.82
3852 4739 0.803768 TTGCAACGCACGTGCAATTT 60.804 45.000 37.03 24.10 42.65 1.82
3853 4740 1.226802 TTGCAACGCACGTGCAATT 60.227 47.368 37.03 27.50 42.65 2.32
3854 4741 2.410879 TTGCAACGCACGTGCAAT 59.589 50.000 37.03 23.49 42.65 3.56
3855 4742 2.578178 GTTGCAACGCACGTGCAA 60.578 55.556 37.03 22.12 44.88 4.08
3856 4743 4.877882 CGTTGCAACGCACGTGCA 62.878 61.111 35.89 17.31 46.06 4.57
3865 4752 3.057596 TGGATGATTTCTTCCGTTGCAAC 60.058 43.478 19.89 19.89 41.58 4.17
3866 4753 3.153130 TGGATGATTTCTTCCGTTGCAA 58.847 40.909 0.00 0.00 41.58 4.08
3867 4754 2.789213 TGGATGATTTCTTCCGTTGCA 58.211 42.857 7.70 0.00 41.58 4.08
3868 4755 3.699067 CATGGATGATTTCTTCCGTTGC 58.301 45.455 4.84 0.00 41.58 4.17
3869 4756 3.129113 TGCATGGATGATTTCTTCCGTTG 59.871 43.478 4.84 7.37 41.58 4.10
3870 4757 3.355378 TGCATGGATGATTTCTTCCGTT 58.645 40.909 4.84 0.00 41.58 4.44
3871 4758 3.003394 TGCATGGATGATTTCTTCCGT 57.997 42.857 7.70 5.07 41.58 4.69
3872 4759 3.489738 GGTTGCATGGATGATTTCTTCCG 60.490 47.826 7.70 0.00 41.58 4.30
3873 4760 3.181472 GGGTTGCATGGATGATTTCTTCC 60.181 47.826 5.72 5.72 39.77 3.46
3874 4761 3.448301 TGGGTTGCATGGATGATTTCTTC 59.552 43.478 0.00 0.00 0.00 2.87
3875 4762 3.196254 GTGGGTTGCATGGATGATTTCTT 59.804 43.478 0.00 0.00 0.00 2.52
3876 4763 2.762327 GTGGGTTGCATGGATGATTTCT 59.238 45.455 0.00 0.00 0.00 2.52
3877 4764 2.762327 AGTGGGTTGCATGGATGATTTC 59.238 45.455 0.00 0.00 0.00 2.17
3878 4765 2.823959 AGTGGGTTGCATGGATGATTT 58.176 42.857 0.00 0.00 0.00 2.17
3879 4766 2.498481 CAAGTGGGTTGCATGGATGATT 59.502 45.455 0.00 0.00 0.00 2.57
3880 4767 2.104967 CAAGTGGGTTGCATGGATGAT 58.895 47.619 0.00 0.00 0.00 2.45
3881 4768 1.203038 ACAAGTGGGTTGCATGGATGA 60.203 47.619 0.00 0.00 40.15 2.92
3882 4769 1.259609 ACAAGTGGGTTGCATGGATG 58.740 50.000 0.00 0.00 40.15 3.51
3883 4770 2.897271 TACAAGTGGGTTGCATGGAT 57.103 45.000 0.00 0.00 40.15 3.41
3884 4771 2.666272 TTACAAGTGGGTTGCATGGA 57.334 45.000 0.00 0.00 40.15 3.41
3885 4772 3.959535 AATTACAAGTGGGTTGCATGG 57.040 42.857 0.00 0.00 40.15 3.66
3886 4773 7.151308 TCTTTTAATTACAAGTGGGTTGCATG 58.849 34.615 10.41 0.00 40.15 4.06
3887 4774 7.296628 TCTTTTAATTACAAGTGGGTTGCAT 57.703 32.000 10.41 0.00 40.15 3.96
3888 4775 6.716934 TCTTTTAATTACAAGTGGGTTGCA 57.283 33.333 10.41 0.00 40.15 4.08
3889 4776 8.332464 GTTTTCTTTTAATTACAAGTGGGTTGC 58.668 33.333 10.41 0.00 40.15 4.17
3890 4777 9.372369 TGTTTTCTTTTAATTACAAGTGGGTTG 57.628 29.630 10.41 0.00 42.48 3.77
3891 4778 9.945904 TTGTTTTCTTTTAATTACAAGTGGGTT 57.054 25.926 10.41 0.00 0.00 4.11
3925 4812 9.933723 CAGGTAATTGGAAAGATCTCAAATTTT 57.066 29.630 0.00 0.00 0.00 1.82
3926 4813 9.312904 TCAGGTAATTGGAAAGATCTCAAATTT 57.687 29.630 0.00 0.00 0.00 1.82
3927 4814 8.743714 GTCAGGTAATTGGAAAGATCTCAAATT 58.256 33.333 0.00 0.00 0.00 1.82
3928 4815 7.890127 TGTCAGGTAATTGGAAAGATCTCAAAT 59.110 33.333 0.00 0.00 0.00 2.32
3929 4816 7.230747 TGTCAGGTAATTGGAAAGATCTCAAA 58.769 34.615 0.00 0.00 0.00 2.69
3930 4817 6.778821 TGTCAGGTAATTGGAAAGATCTCAA 58.221 36.000 0.00 0.00 0.00 3.02
3931 4818 6.373005 TGTCAGGTAATTGGAAAGATCTCA 57.627 37.500 0.00 0.00 0.00 3.27
3932 4819 7.050377 TCATGTCAGGTAATTGGAAAGATCTC 58.950 38.462 0.00 0.00 0.00 2.75
3933 4820 6.962182 TCATGTCAGGTAATTGGAAAGATCT 58.038 36.000 0.00 0.00 0.00 2.75
3934 4821 7.050377 TCTCATGTCAGGTAATTGGAAAGATC 58.950 38.462 0.00 0.00 0.00 2.75
3935 4822 6.962182 TCTCATGTCAGGTAATTGGAAAGAT 58.038 36.000 0.00 0.00 0.00 2.40
3936 4823 6.373005 TCTCATGTCAGGTAATTGGAAAGA 57.627 37.500 0.00 0.00 0.00 2.52
3937 4824 7.452880 TTTCTCATGTCAGGTAATTGGAAAG 57.547 36.000 0.00 0.00 0.00 2.62
3938 4825 8.421249 AATTTCTCATGTCAGGTAATTGGAAA 57.579 30.769 0.00 0.00 0.00 3.13
3939 4826 9.527157 TTAATTTCTCATGTCAGGTAATTGGAA 57.473 29.630 0.00 0.00 0.00 3.53
3940 4827 9.527157 TTTAATTTCTCATGTCAGGTAATTGGA 57.473 29.630 0.00 0.00 0.00 3.53
3954 4841 9.985730 TGCACTGAAAGAATTTTAATTTCTCAT 57.014 25.926 3.08 0.00 39.27 2.90
3955 4842 9.248291 GTGCACTGAAAGAATTTTAATTTCTCA 57.752 29.630 10.32 0.00 39.27 3.27
3956 4843 9.248291 TGTGCACTGAAAGAATTTTAATTTCTC 57.752 29.630 19.41 0.00 39.27 2.87
3957 4844 9.768662 ATGTGCACTGAAAGAATTTTAATTTCT 57.231 25.926 19.41 0.00 39.27 2.52
3962 4849 9.638239 GGAATATGTGCACTGAAAGAATTTTAA 57.362 29.630 19.41 0.00 39.27 1.52
3963 4850 7.967854 CGGAATATGTGCACTGAAAGAATTTTA 59.032 33.333 19.41 0.00 39.27 1.52
3964 4851 6.808212 CGGAATATGTGCACTGAAAGAATTTT 59.192 34.615 19.41 2.60 39.27 1.82
3965 4852 6.324819 CGGAATATGTGCACTGAAAGAATTT 58.675 36.000 19.41 0.00 43.98 1.82
3966 4853 5.677091 GCGGAATATGTGCACTGAAAGAATT 60.677 40.000 19.41 6.92 37.43 2.17
3967 4854 4.201950 GCGGAATATGTGCACTGAAAGAAT 60.202 41.667 19.41 3.51 37.43 2.40
3968 4855 3.126858 GCGGAATATGTGCACTGAAAGAA 59.873 43.478 19.41 0.00 37.43 2.52
3969 4856 2.677836 GCGGAATATGTGCACTGAAAGA 59.322 45.455 19.41 0.00 37.43 2.52
3970 4857 2.419673 TGCGGAATATGTGCACTGAAAG 59.580 45.455 19.41 4.81 42.29 2.62
3971 4858 2.431454 TGCGGAATATGTGCACTGAAA 58.569 42.857 19.41 0.00 32.86 2.69
3972 4859 2.106477 TGCGGAATATGTGCACTGAA 57.894 45.000 19.41 3.49 32.86 3.02
3973 4860 2.106477 TTGCGGAATATGTGCACTGA 57.894 45.000 19.41 6.03 38.55 3.41
3974 4861 2.789208 CTTTGCGGAATATGTGCACTG 58.211 47.619 19.41 0.00 38.55 3.66
3975 4862 1.133025 GCTTTGCGGAATATGTGCACT 59.867 47.619 19.41 6.22 38.55 4.40
3976 4863 1.135431 TGCTTTGCGGAATATGTGCAC 60.135 47.619 10.75 10.75 38.55 4.57
3977 4864 1.172175 TGCTTTGCGGAATATGTGCA 58.828 45.000 0.00 0.00 36.72 4.57
3978 4865 2.276472 TTGCTTTGCGGAATATGTGC 57.724 45.000 0.00 0.00 0.00 4.57
3979 4866 6.531240 ACTTTAATTGCTTTGCGGAATATGTG 59.469 34.615 0.00 0.00 31.92 3.21
3980 4867 6.531240 CACTTTAATTGCTTTGCGGAATATGT 59.469 34.615 0.00 0.00 31.92 2.29
3981 4868 6.751425 TCACTTTAATTGCTTTGCGGAATATG 59.249 34.615 0.00 0.00 31.92 1.78
3982 4869 6.862209 TCACTTTAATTGCTTTGCGGAATAT 58.138 32.000 0.00 0.00 31.92 1.28
3983 4870 6.260870 TCACTTTAATTGCTTTGCGGAATA 57.739 33.333 0.00 0.00 31.92 1.75
3984 4871 5.132897 TCACTTTAATTGCTTTGCGGAAT 57.867 34.783 0.00 0.00 34.90 3.01
3985 4872 4.576216 TCACTTTAATTGCTTTGCGGAA 57.424 36.364 0.00 0.00 0.00 4.30
3986 4873 4.545610 CTTCACTTTAATTGCTTTGCGGA 58.454 39.130 0.00 0.00 0.00 5.54
3987 4874 3.121778 GCTTCACTTTAATTGCTTTGCGG 59.878 43.478 0.00 0.00 0.00 5.69
3988 4875 3.983344 AGCTTCACTTTAATTGCTTTGCG 59.017 39.130 0.00 0.00 0.00 4.85
3989 4876 4.984161 TCAGCTTCACTTTAATTGCTTTGC 59.016 37.500 0.00 0.00 0.00 3.68
3990 4877 6.476380 TGTTCAGCTTCACTTTAATTGCTTTG 59.524 34.615 0.00 0.00 0.00 2.77
3991 4878 6.572519 TGTTCAGCTTCACTTTAATTGCTTT 58.427 32.000 0.00 0.00 0.00 3.51
3992 4879 6.147864 TGTTCAGCTTCACTTTAATTGCTT 57.852 33.333 0.00 0.00 0.00 3.91
3993 4880 5.772825 TGTTCAGCTTCACTTTAATTGCT 57.227 34.783 0.00 0.00 0.00 3.91
3994 4881 6.089954 GGAATGTTCAGCTTCACTTTAATTGC 59.910 38.462 0.00 0.00 0.00 3.56
3995 4882 7.147312 TGGAATGTTCAGCTTCACTTTAATTG 58.853 34.615 0.00 0.00 0.00 2.32
3996 4883 7.288810 TGGAATGTTCAGCTTCACTTTAATT 57.711 32.000 0.00 0.00 0.00 1.40
3997 4884 6.899393 TGGAATGTTCAGCTTCACTTTAAT 57.101 33.333 0.00 0.00 0.00 1.40
3998 4885 6.321181 AGTTGGAATGTTCAGCTTCACTTTAA 59.679 34.615 0.00 0.00 0.00 1.52
3999 4886 5.827797 AGTTGGAATGTTCAGCTTCACTTTA 59.172 36.000 0.00 0.00 0.00 1.85
4000 4887 4.646492 AGTTGGAATGTTCAGCTTCACTTT 59.354 37.500 0.00 0.00 0.00 2.66
4001 4888 4.210331 AGTTGGAATGTTCAGCTTCACTT 58.790 39.130 0.00 0.00 0.00 3.16
4002 4889 3.817647 GAGTTGGAATGTTCAGCTTCACT 59.182 43.478 0.00 0.00 0.00 3.41
4003 4890 3.817647 AGAGTTGGAATGTTCAGCTTCAC 59.182 43.478 0.00 0.00 0.00 3.18
4004 4891 4.090761 AGAGTTGGAATGTTCAGCTTCA 57.909 40.909 0.00 0.00 0.00 3.02
4005 4892 4.997395 TGTAGAGTTGGAATGTTCAGCTTC 59.003 41.667 0.00 0.00 0.00 3.86
4006 4893 4.973168 TGTAGAGTTGGAATGTTCAGCTT 58.027 39.130 0.00 0.00 0.00 3.74
4007 4894 4.623932 TGTAGAGTTGGAATGTTCAGCT 57.376 40.909 0.00 0.00 0.00 4.24
4008 4895 4.997395 TCTTGTAGAGTTGGAATGTTCAGC 59.003 41.667 0.00 0.00 0.00 4.26
4009 4896 6.314896 GGATCTTGTAGAGTTGGAATGTTCAG 59.685 42.308 0.00 0.00 0.00 3.02
4010 4897 6.173339 GGATCTTGTAGAGTTGGAATGTTCA 58.827 40.000 0.00 0.00 0.00 3.18
4011 4898 5.586643 GGGATCTTGTAGAGTTGGAATGTTC 59.413 44.000 0.00 0.00 0.00 3.18
4012 4899 5.251700 AGGGATCTTGTAGAGTTGGAATGTT 59.748 40.000 0.00 0.00 0.00 2.71
4013 4900 4.785376 AGGGATCTTGTAGAGTTGGAATGT 59.215 41.667 0.00 0.00 0.00 2.71
4014 4901 5.365021 AGGGATCTTGTAGAGTTGGAATG 57.635 43.478 0.00 0.00 0.00 2.67
4015 4902 7.039644 CGTATAGGGATCTTGTAGAGTTGGAAT 60.040 40.741 0.00 0.00 0.00 3.01
4016 4903 6.264744 CGTATAGGGATCTTGTAGAGTTGGAA 59.735 42.308 0.00 0.00 0.00 3.53
4017 4904 5.768662 CGTATAGGGATCTTGTAGAGTTGGA 59.231 44.000 0.00 0.00 0.00 3.53
4018 4905 5.535406 ACGTATAGGGATCTTGTAGAGTTGG 59.465 44.000 0.00 0.00 0.00 3.77
4019 4906 6.439599 CACGTATAGGGATCTTGTAGAGTTG 58.560 44.000 0.00 0.00 0.00 3.16
4020 4907 5.009811 GCACGTATAGGGATCTTGTAGAGTT 59.990 44.000 0.00 0.00 0.00 3.01
4021 4908 4.519730 GCACGTATAGGGATCTTGTAGAGT 59.480 45.833 0.00 0.00 0.00 3.24
4022 4909 4.519350 TGCACGTATAGGGATCTTGTAGAG 59.481 45.833 0.00 0.00 0.00 2.43
4023 4910 4.466827 TGCACGTATAGGGATCTTGTAGA 58.533 43.478 0.00 0.00 0.00 2.59
4024 4911 4.519350 TCTGCACGTATAGGGATCTTGTAG 59.481 45.833 0.00 0.00 0.00 2.74
4025 4912 4.466827 TCTGCACGTATAGGGATCTTGTA 58.533 43.478 0.00 0.00 0.00 2.41
4026 4913 3.296854 TCTGCACGTATAGGGATCTTGT 58.703 45.455 0.00 0.00 0.00 3.16
4027 4914 4.051922 GTTCTGCACGTATAGGGATCTTG 58.948 47.826 0.00 0.00 0.00 3.02
4028 4915 3.704566 TGTTCTGCACGTATAGGGATCTT 59.295 43.478 0.00 0.00 0.00 2.40
4029 4916 3.296854 TGTTCTGCACGTATAGGGATCT 58.703 45.455 0.00 0.00 0.00 2.75
4030 4917 3.318275 TCTGTTCTGCACGTATAGGGATC 59.682 47.826 0.00 0.00 0.00 3.36
4031 4918 3.296854 TCTGTTCTGCACGTATAGGGAT 58.703 45.455 0.00 0.00 0.00 3.85
4032 4919 2.730382 TCTGTTCTGCACGTATAGGGA 58.270 47.619 0.00 0.00 0.00 4.20
4033 4920 3.187700 GTTCTGTTCTGCACGTATAGGG 58.812 50.000 0.00 0.00 0.00 3.53
4034 4921 3.612860 GTGTTCTGTTCTGCACGTATAGG 59.387 47.826 0.00 0.00 0.00 2.57
4035 4922 4.486090 AGTGTTCTGTTCTGCACGTATAG 58.514 43.478 0.00 0.00 36.99 1.31
4036 4923 4.022676 TGAGTGTTCTGTTCTGCACGTATA 60.023 41.667 0.00 0.00 36.99 1.47
4037 4924 3.243737 TGAGTGTTCTGTTCTGCACGTAT 60.244 43.478 0.00 0.00 36.99 3.06
4038 4925 2.100087 TGAGTGTTCTGTTCTGCACGTA 59.900 45.455 0.00 0.00 36.99 3.57
4039 4926 1.134818 TGAGTGTTCTGTTCTGCACGT 60.135 47.619 0.00 0.00 36.99 4.49
4040 4927 1.258982 GTGAGTGTTCTGTTCTGCACG 59.741 52.381 0.00 0.00 36.99 5.34
4041 4928 2.286294 CAGTGAGTGTTCTGTTCTGCAC 59.714 50.000 0.00 0.00 0.00 4.57
4042 4929 2.554142 CAGTGAGTGTTCTGTTCTGCA 58.446 47.619 0.00 0.00 0.00 4.41
4043 4930 1.869767 CCAGTGAGTGTTCTGTTCTGC 59.130 52.381 0.00 0.00 0.00 4.26
4044 4931 1.869767 GCCAGTGAGTGTTCTGTTCTG 59.130 52.381 0.00 0.00 0.00 3.02
4045 4932 1.539065 CGCCAGTGAGTGTTCTGTTCT 60.539 52.381 0.00 0.00 0.00 3.01
4046 4933 0.861837 CGCCAGTGAGTGTTCTGTTC 59.138 55.000 0.00 0.00 0.00 3.18
4047 4934 0.178068 ACGCCAGTGAGTGTTCTGTT 59.822 50.000 0.00 0.00 0.00 3.16
4048 4935 0.178068 AACGCCAGTGAGTGTTCTGT 59.822 50.000 0.00 0.00 35.62 3.41
4049 4936 0.583438 CAACGCCAGTGAGTGTTCTG 59.417 55.000 7.35 0.00 38.38 3.02
4050 4937 0.178068 ACAACGCCAGTGAGTGTTCT 59.822 50.000 7.35 0.00 38.38 3.01
4051 4938 0.304705 CACAACGCCAGTGAGTGTTC 59.695 55.000 7.35 0.00 38.38 3.18
4052 4939 1.095228 CCACAACGCCAGTGAGTGTT 61.095 55.000 4.29 0.00 41.01 3.32
4053 4940 1.523711 CCACAACGCCAGTGAGTGT 60.524 57.895 4.29 0.00 39.30 3.55
4054 4941 2.896801 GCCACAACGCCAGTGAGTG 61.897 63.158 4.29 0.00 39.30 3.51
4055 4942 1.754380 TAGCCACAACGCCAGTGAGT 61.754 55.000 4.29 0.00 39.30 3.41
4056 4943 1.005037 TAGCCACAACGCCAGTGAG 60.005 57.895 4.29 0.00 39.30 3.51
4057 4944 1.005037 CTAGCCACAACGCCAGTGA 60.005 57.895 4.29 0.00 39.30 3.41
4058 4945 2.680913 GCTAGCCACAACGCCAGTG 61.681 63.158 2.29 0.00 36.76 3.66
4059 4946 2.358737 GCTAGCCACAACGCCAGT 60.359 61.111 2.29 0.00 0.00 4.00
4060 4947 2.046892 AGCTAGCCACAACGCCAG 60.047 61.111 12.13 0.00 0.00 4.85
4061 4948 2.047274 GAGCTAGCCACAACGCCA 60.047 61.111 12.13 0.00 0.00 5.69
4062 4949 1.026718 AATGAGCTAGCCACAACGCC 61.027 55.000 12.13 0.00 0.00 5.68
4063 4950 0.375106 GAATGAGCTAGCCACAACGC 59.625 55.000 12.13 3.03 0.00 4.84
4064 4951 2.015736 AGAATGAGCTAGCCACAACG 57.984 50.000 12.13 0.00 0.00 4.10
4065 4952 3.861840 TGTAGAATGAGCTAGCCACAAC 58.138 45.455 12.13 10.61 0.00 3.32
4066 4953 4.551702 TTGTAGAATGAGCTAGCCACAA 57.448 40.909 12.13 7.74 0.00 3.33
4067 4954 4.253685 GTTTGTAGAATGAGCTAGCCACA 58.746 43.478 12.13 12.80 0.00 4.17
4068 4955 4.253685 TGTTTGTAGAATGAGCTAGCCAC 58.746 43.478 12.13 6.84 0.00 5.01
4069 4956 4.551702 TGTTTGTAGAATGAGCTAGCCA 57.448 40.909 12.13 9.78 0.00 4.75
4070 4957 5.819901 AGATTGTTTGTAGAATGAGCTAGCC 59.180 40.000 12.13 3.49 0.00 3.93
4071 4958 6.314896 ACAGATTGTTTGTAGAATGAGCTAGC 59.685 38.462 6.62 6.62 0.00 3.42
4072 4959 7.840342 ACAGATTGTTTGTAGAATGAGCTAG 57.160 36.000 0.00 0.00 0.00 3.42
4073 4960 7.119699 CCAACAGATTGTTTGTAGAATGAGCTA 59.880 37.037 0.00 0.00 38.77 3.32
4074 4961 6.072286 CCAACAGATTGTTTGTAGAATGAGCT 60.072 38.462 0.00 0.00 38.77 4.09
4075 4962 6.088824 CCAACAGATTGTTTGTAGAATGAGC 58.911 40.000 0.00 0.00 38.77 4.26
4076 4963 7.206981 ACCAACAGATTGTTTGTAGAATGAG 57.793 36.000 0.00 0.00 38.77 2.90
4077 4964 6.206634 GGACCAACAGATTGTTTGTAGAATGA 59.793 38.462 0.00 0.00 38.77 2.57
4078 4965 6.381801 GGACCAACAGATTGTTTGTAGAATG 58.618 40.000 0.00 0.00 38.77 2.67
4079 4966 5.476945 GGGACCAACAGATTGTTTGTAGAAT 59.523 40.000 0.00 0.00 38.77 2.40
4080 4967 4.825085 GGGACCAACAGATTGTTTGTAGAA 59.175 41.667 0.00 0.00 38.77 2.10
4081 4968 4.141367 TGGGACCAACAGATTGTTTGTAGA 60.141 41.667 0.00 0.00 38.77 2.59
4082 4969 4.141287 TGGGACCAACAGATTGTTTGTAG 58.859 43.478 0.00 0.00 38.77 2.74
4083 4970 4.141287 CTGGGACCAACAGATTGTTTGTA 58.859 43.478 0.00 0.00 38.77 2.41
4084 4971 2.958355 CTGGGACCAACAGATTGTTTGT 59.042 45.455 0.00 0.00 38.77 2.83
4085 4972 2.297033 CCTGGGACCAACAGATTGTTTG 59.703 50.000 0.00 0.00 38.77 2.93
4086 4973 2.091333 ACCTGGGACCAACAGATTGTTT 60.091 45.455 0.00 0.00 38.77 2.83
4087 4974 1.499007 ACCTGGGACCAACAGATTGTT 59.501 47.619 0.00 0.00 42.08 2.83
4088 4975 1.149101 ACCTGGGACCAACAGATTGT 58.851 50.000 0.00 0.00 38.20 2.71
4089 4976 2.162681 GAACCTGGGACCAACAGATTG 58.837 52.381 0.00 0.00 38.20 2.67
4090 4977 1.780309 TGAACCTGGGACCAACAGATT 59.220 47.619 0.00 0.00 38.20 2.40
4091 4978 1.444933 TGAACCTGGGACCAACAGAT 58.555 50.000 0.00 0.00 38.20 2.90
4092 4979 1.217916 TTGAACCTGGGACCAACAGA 58.782 50.000 0.00 0.00 38.20 3.41
4093 4980 2.162681 GATTGAACCTGGGACCAACAG 58.837 52.381 0.00 0.00 35.74 3.16
4094 4981 1.544537 CGATTGAACCTGGGACCAACA 60.545 52.381 0.00 0.00 0.00 3.33
4095 4982 1.165270 CGATTGAACCTGGGACCAAC 58.835 55.000 0.00 0.00 0.00 3.77
4096 4983 0.608035 GCGATTGAACCTGGGACCAA 60.608 55.000 0.00 0.00 0.00 3.67
4097 4984 1.002624 GCGATTGAACCTGGGACCA 60.003 57.895 0.00 0.00 0.00 4.02
4098 4985 2.106683 CGCGATTGAACCTGGGACC 61.107 63.158 0.00 0.00 0.00 4.46
4099 4986 2.106683 CCGCGATTGAACCTGGGAC 61.107 63.158 8.23 0.00 0.00 4.46
4100 4987 2.267642 CCGCGATTGAACCTGGGA 59.732 61.111 8.23 0.00 0.00 4.37
4101 4988 3.508840 GCCGCGATTGAACCTGGG 61.509 66.667 8.23 0.00 0.00 4.45
4102 4989 0.742990 TAAGCCGCGATTGAACCTGG 60.743 55.000 8.23 0.00 0.00 4.45
4103 4990 0.652592 CTAAGCCGCGATTGAACCTG 59.347 55.000 8.23 0.00 0.00 4.00
4104 4991 0.535335 TCTAAGCCGCGATTGAACCT 59.465 50.000 8.23 0.00 0.00 3.50
4105 4992 0.651031 GTCTAAGCCGCGATTGAACC 59.349 55.000 8.23 0.00 0.00 3.62
4106 4993 1.355971 TGTCTAAGCCGCGATTGAAC 58.644 50.000 8.23 5.76 0.00 3.18
4107 4994 2.309528 ATGTCTAAGCCGCGATTGAA 57.690 45.000 8.23 0.00 0.00 2.69
4108 4995 2.309528 AATGTCTAAGCCGCGATTGA 57.690 45.000 8.23 0.00 0.00 2.57
4109 4996 3.060272 CAGTAATGTCTAAGCCGCGATTG 60.060 47.826 8.23 0.00 0.00 2.67
4110 4997 3.123804 CAGTAATGTCTAAGCCGCGATT 58.876 45.455 8.23 4.46 0.00 3.34
4111 4998 2.100916 ACAGTAATGTCTAAGCCGCGAT 59.899 45.455 8.23 0.00 0.00 4.58
4112 4999 1.475280 ACAGTAATGTCTAAGCCGCGA 59.525 47.619 8.23 0.00 0.00 5.87
4113 5000 1.922570 ACAGTAATGTCTAAGCCGCG 58.077 50.000 0.00 0.00 0.00 6.46
4114 5001 3.259064 TGAACAGTAATGTCTAAGCCGC 58.741 45.455 0.00 0.00 0.00 6.53
4115 5002 4.271049 CCATGAACAGTAATGTCTAAGCCG 59.729 45.833 0.00 0.00 0.00 5.52
4116 5003 5.741388 CCATGAACAGTAATGTCTAAGCC 57.259 43.478 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.