Multiple sequence alignment - TraesCS5B01G066000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G066000 chr5B 100.000 3136 0 0 1 3136 74145143 74148278 0.000000e+00 5792.0
1 TraesCS5B01G066000 chr5B 97.006 334 9 1 468 800 262051458 262051125 7.600000e-156 560.0
2 TraesCS5B01G066000 chr5B 94.000 50 3 0 350 399 707022197 707022246 3.350000e-10 76.8
3 TraesCS5B01G066000 chr5D 94.327 2080 51 18 1091 3136 68229077 68231123 0.000000e+00 3125.0
4 TraesCS5B01G066000 chr5D 85.872 1996 177 37 1174 3136 68088272 68090195 0.000000e+00 2026.0
5 TraesCS5B01G066000 chr5D 92.971 441 21 6 3 440 68131801 68132234 4.410000e-178 634.0
6 TraesCS5B01G066000 chr5D 86.667 345 42 4 3 346 233721758 233721417 2.280000e-101 379.0
7 TraesCS5B01G066000 chr5D 85.630 341 35 8 3 341 58517805 58518133 2.320000e-91 346.0
8 TraesCS5B01G066000 chr5D 89.071 183 4 6 849 1031 68228914 68229080 2.450000e-51 213.0
9 TraesCS5B01G066000 chr5D 90.972 144 5 2 847 990 68087735 68087870 1.490000e-43 187.0
10 TraesCS5B01G066000 chr5A 97.188 1209 30 4 1928 3136 55335173 55333969 0.000000e+00 2041.0
11 TraesCS5B01G066000 chr5A 89.586 797 46 9 1104 1890 55336159 55335390 0.000000e+00 977.0
12 TraesCS5B01G066000 chr5A 85.714 203 8 5 847 1036 55336685 55336491 8.870000e-46 195.0
13 TraesCS5B01G066000 chr1B 97.633 338 6 2 468 803 27285651 27285988 2.100000e-161 579.0
14 TraesCS5B01G066000 chr2B 97.313 335 8 1 468 801 9092793 9092459 4.540000e-158 568.0
15 TraesCS5B01G066000 chr2B 97.264 329 8 1 472 799 744085830 744086158 9.830000e-155 556.0
16 TraesCS5B01G066000 chr7A 97.015 335 9 1 468 801 634980594 634980260 2.110000e-156 562.0
17 TraesCS5B01G066000 chr7A 86.416 346 39 4 3 343 36364484 36364142 3.820000e-99 372.0
18 TraesCS5B01G066000 chr3B 97.015 335 9 1 468 801 880847 880513 2.110000e-156 562.0
19 TraesCS5B01G066000 chr3B 84.848 66 9 1 343 407 412598970 412599035 7.260000e-07 65.8
20 TraesCS5B01G066000 chr1A 97.015 335 9 1 468 801 23184007 23184341 2.110000e-156 562.0
21 TraesCS5B01G066000 chr1A 96.418 335 10 2 468 801 300940578 300940245 4.570000e-153 551.0
22 TraesCS5B01G066000 chr1A 86.765 68 8 1 343 409 501642932 501642865 1.210000e-09 75.0
23 TraesCS5B01G066000 chr4A 96.407 334 11 1 468 800 674619991 674619658 1.640000e-152 549.0
24 TraesCS5B01G066000 chr6B 86.944 337 41 3 3 338 708374027 708373693 2.950000e-100 375.0
25 TraesCS5B01G066000 chr3D 81.120 482 67 19 3 466 580699795 580700270 6.390000e-97 364.0
26 TraesCS5B01G066000 chr3D 91.903 247 16 4 3 248 533692100 533692343 2.990000e-90 342.0
27 TraesCS5B01G066000 chr3D 87.356 87 11 0 257 343 533692429 533692515 1.990000e-17 100.0
28 TraesCS5B01G066000 chr3A 92.339 248 17 2 3 249 509439112 509439358 4.980000e-93 351.0
29 TraesCS5B01G066000 chr7D 89.474 266 27 1 78 343 36491833 36491569 5.010000e-88 335.0
30 TraesCS5B01G066000 chr7D 80.226 177 31 4 1981 2155 45781602 45781428 2.540000e-26 130.0
31 TraesCS5B01G066000 chr7D 89.130 92 8 2 350 440 237857323 237857233 2.560000e-21 113.0
32 TraesCS5B01G066000 chr7D 81.600 125 15 5 340 457 542936810 542936933 2.570000e-16 97.1
33 TraesCS5B01G066000 chr2D 80.312 320 36 9 46 344 548603749 548604062 1.890000e-52 217.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G066000 chr5B 74145143 74148278 3135 False 5792.0 5792 100.000000 1 3136 1 chr5B.!!$F1 3135
1 TraesCS5B01G066000 chr5D 68228914 68231123 2209 False 1669.0 3125 91.699000 849 3136 2 chr5D.!!$F4 2287
2 TraesCS5B01G066000 chr5D 68087735 68090195 2460 False 1106.5 2026 88.422000 847 3136 2 chr5D.!!$F3 2289
3 TraesCS5B01G066000 chr5A 55333969 55336685 2716 True 1071.0 2041 90.829333 847 3136 3 chr5A.!!$R1 2289

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
728 729 0.029300 TCTTTTGAGCTTGCGTGTGC 59.971 50.0 0.0 0.0 43.20 4.57 F
729 730 0.029834 CTTTTGAGCTTGCGTGTGCT 59.970 50.0 0.0 0.0 43.34 4.40 F
843 844 0.036732 TGACGGCTGCTTCCTTTCAT 59.963 50.0 0.0 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1673 2010 1.180456 TGCAAGGGGAACACAGCATG 61.180 55.000 0.0 0.0 46.00 4.06 R
1926 2445 1.952621 ACCTAAGCCAGTAAGCCTCA 58.047 50.000 0.0 0.0 0.00 3.86 R
2375 2895 2.123589 TCAAGGACTTCCCACAGACAA 58.876 47.619 0.0 0.0 37.41 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.148279 CGTCTTCCTCCCTCCCCG 61.148 72.222 0.00 0.00 0.00 5.73
18 19 2.764547 GTCTTCCTCCCTCCCCGG 60.765 72.222 0.00 0.00 0.00 5.73
19 20 4.798682 TCTTCCTCCCTCCCCGGC 62.799 72.222 0.00 0.00 0.00 6.13
21 22 4.431524 TTCCTCCCTCCCCGGCAT 62.432 66.667 0.00 0.00 0.00 4.40
22 23 4.880426 TCCTCCCTCCCCGGCATC 62.880 72.222 0.00 0.00 0.00 3.91
23 24 4.888325 CCTCCCTCCCCGGCATCT 62.888 72.222 0.00 0.00 0.00 2.90
24 25 3.237741 CTCCCTCCCCGGCATCTC 61.238 72.222 0.00 0.00 0.00 2.75
25 26 4.880426 TCCCTCCCCGGCATCTCC 62.880 72.222 0.00 0.00 0.00 3.71
26 27 4.888325 CCCTCCCCGGCATCTCCT 62.888 72.222 0.00 0.00 0.00 3.69
27 28 3.237741 CCTCCCCGGCATCTCCTC 61.238 72.222 0.00 0.00 0.00 3.71
28 29 3.237741 CTCCCCGGCATCTCCTCC 61.238 72.222 0.00 0.00 0.00 4.30
29 30 3.765257 CTCCCCGGCATCTCCTCCT 62.765 68.421 0.00 0.00 0.00 3.69
30 31 3.237741 CCCCGGCATCTCCTCCTC 61.238 72.222 0.00 0.00 0.00 3.71
31 32 2.444706 CCCGGCATCTCCTCCTCA 60.445 66.667 0.00 0.00 0.00 3.86
32 33 2.066393 CCCGGCATCTCCTCCTCAA 61.066 63.158 0.00 0.00 0.00 3.02
33 34 1.144936 CCGGCATCTCCTCCTCAAC 59.855 63.158 0.00 0.00 0.00 3.18
34 35 1.144936 CGGCATCTCCTCCTCAACC 59.855 63.158 0.00 0.00 0.00 3.77
35 36 1.333636 CGGCATCTCCTCCTCAACCT 61.334 60.000 0.00 0.00 0.00 3.50
36 37 0.467804 GGCATCTCCTCCTCAACCTC 59.532 60.000 0.00 0.00 0.00 3.85
37 38 0.467804 GCATCTCCTCCTCAACCTCC 59.532 60.000 0.00 0.00 0.00 4.30
38 39 1.969240 GCATCTCCTCCTCAACCTCCT 60.969 57.143 0.00 0.00 0.00 3.69
39 40 2.038659 CATCTCCTCCTCAACCTCCTC 58.961 57.143 0.00 0.00 0.00 3.71
40 41 0.033991 TCTCCTCCTCAACCTCCTCG 60.034 60.000 0.00 0.00 0.00 4.63
41 42 0.033991 CTCCTCCTCAACCTCCTCGA 60.034 60.000 0.00 0.00 0.00 4.04
42 43 0.408309 TCCTCCTCAACCTCCTCGAA 59.592 55.000 0.00 0.00 0.00 3.71
43 44 1.203137 TCCTCCTCAACCTCCTCGAAA 60.203 52.381 0.00 0.00 0.00 3.46
44 45 1.623811 CCTCCTCAACCTCCTCGAAAA 59.376 52.381 0.00 0.00 0.00 2.29
45 46 2.237392 CCTCCTCAACCTCCTCGAAAAT 59.763 50.000 0.00 0.00 0.00 1.82
46 47 3.526534 CTCCTCAACCTCCTCGAAAATC 58.473 50.000 0.00 0.00 0.00 2.17
47 48 2.236395 TCCTCAACCTCCTCGAAAATCC 59.764 50.000 0.00 0.00 0.00 3.01
48 49 2.237392 CCTCAACCTCCTCGAAAATCCT 59.763 50.000 0.00 0.00 0.00 3.24
49 50 3.526534 CTCAACCTCCTCGAAAATCCTC 58.473 50.000 0.00 0.00 0.00 3.71
50 51 2.236395 TCAACCTCCTCGAAAATCCTCC 59.764 50.000 0.00 0.00 0.00 4.30
51 52 2.237392 CAACCTCCTCGAAAATCCTCCT 59.763 50.000 0.00 0.00 0.00 3.69
52 53 2.112190 ACCTCCTCGAAAATCCTCCTC 58.888 52.381 0.00 0.00 0.00 3.71
53 54 1.414550 CCTCCTCGAAAATCCTCCTCC 59.585 57.143 0.00 0.00 0.00 4.30
54 55 1.067821 CTCCTCGAAAATCCTCCTCCG 59.932 57.143 0.00 0.00 0.00 4.63
55 56 0.105039 CCTCGAAAATCCTCCTCCGG 59.895 60.000 0.00 0.00 0.00 5.14
56 57 0.824759 CTCGAAAATCCTCCTCCGGT 59.175 55.000 0.00 0.00 0.00 5.28
57 58 1.207329 CTCGAAAATCCTCCTCCGGTT 59.793 52.381 0.00 0.00 0.00 4.44
58 59 2.429610 CTCGAAAATCCTCCTCCGGTTA 59.570 50.000 0.00 0.00 0.00 2.85
59 60 2.167075 TCGAAAATCCTCCTCCGGTTAC 59.833 50.000 0.00 0.00 0.00 2.50
60 61 2.093869 CGAAAATCCTCCTCCGGTTACA 60.094 50.000 0.00 0.00 0.00 2.41
61 62 3.618019 CGAAAATCCTCCTCCGGTTACAA 60.618 47.826 0.00 0.00 0.00 2.41
62 63 4.329392 GAAAATCCTCCTCCGGTTACAAA 58.671 43.478 0.00 0.00 0.00 2.83
63 64 3.629142 AATCCTCCTCCGGTTACAAAG 57.371 47.619 0.00 0.00 0.00 2.77
64 65 1.272807 TCCTCCTCCGGTTACAAAGG 58.727 55.000 0.00 0.00 0.00 3.11
65 66 0.981943 CCTCCTCCGGTTACAAAGGT 59.018 55.000 0.00 0.00 0.00 3.50
66 67 2.181975 CCTCCTCCGGTTACAAAGGTA 58.818 52.381 0.00 0.00 0.00 3.08
67 68 2.167900 CCTCCTCCGGTTACAAAGGTAG 59.832 54.545 0.00 0.00 0.00 3.18
68 69 1.551883 TCCTCCGGTTACAAAGGTAGC 59.448 52.381 0.00 0.00 0.00 3.58
69 70 1.406477 CCTCCGGTTACAAAGGTAGCC 60.406 57.143 0.00 0.00 44.77 3.93
70 71 1.553704 CTCCGGTTACAAAGGTAGCCT 59.446 52.381 0.00 0.00 45.70 4.58
71 72 1.551883 TCCGGTTACAAAGGTAGCCTC 59.448 52.381 0.00 0.00 45.70 4.70
72 73 1.636988 CGGTTACAAAGGTAGCCTCG 58.363 55.000 6.25 0.00 45.70 4.63
73 74 1.366679 GGTTACAAAGGTAGCCTCGC 58.633 55.000 1.11 0.00 44.79 5.03
74 75 1.066358 GGTTACAAAGGTAGCCTCGCT 60.066 52.381 1.11 0.00 44.79 4.93
75 76 2.614734 GGTTACAAAGGTAGCCTCGCTT 60.615 50.000 1.11 0.00 44.79 4.68
76 77 2.667473 TACAAAGGTAGCCTCGCTTC 57.333 50.000 0.00 0.00 40.44 3.86
77 78 0.036294 ACAAAGGTAGCCTCGCTTCC 60.036 55.000 1.34 1.34 44.69 3.46
78 79 0.744771 CAAAGGTAGCCTCGCTTCCC 60.745 60.000 5.76 0.62 45.32 3.97
79 80 0.910088 AAAGGTAGCCTCGCTTCCCT 60.910 55.000 5.76 2.80 45.32 4.20
80 81 0.032416 AAGGTAGCCTCGCTTCCCTA 60.032 55.000 5.76 0.00 45.32 3.53
81 82 0.188834 AGGTAGCCTCGCTTCCCTAT 59.811 55.000 5.76 0.00 45.32 2.57
82 83 0.318762 GGTAGCCTCGCTTCCCTATG 59.681 60.000 0.00 0.00 39.67 2.23
83 84 0.318762 GTAGCCTCGCTTCCCTATGG 59.681 60.000 0.00 0.00 40.44 2.74
84 85 0.187606 TAGCCTCGCTTCCCTATGGA 59.812 55.000 0.00 0.00 40.44 3.41
85 86 0.472734 AGCCTCGCTTCCCTATGGAT 60.473 55.000 0.00 0.00 41.40 3.41
86 87 0.036858 GCCTCGCTTCCCTATGGATC 60.037 60.000 0.00 0.00 41.40 3.36
87 88 0.610687 CCTCGCTTCCCTATGGATCC 59.389 60.000 4.20 4.20 41.40 3.36
88 89 0.244994 CTCGCTTCCCTATGGATCCG 59.755 60.000 7.39 0.00 41.40 4.18
89 90 1.185618 TCGCTTCCCTATGGATCCGG 61.186 60.000 7.39 0.00 41.40 5.14
90 91 1.185618 CGCTTCCCTATGGATCCGGA 61.186 60.000 6.61 6.61 41.40 5.14
91 92 0.321996 GCTTCCCTATGGATCCGGAC 59.678 60.000 6.12 0.00 41.40 4.79
92 93 0.977395 CTTCCCTATGGATCCGGACC 59.023 60.000 6.12 11.46 41.40 4.46
93 94 0.566176 TTCCCTATGGATCCGGACCT 59.434 55.000 6.12 0.00 41.40 3.85
94 95 0.178932 TCCCTATGGATCCGGACCTG 60.179 60.000 6.12 5.48 35.03 4.00
95 96 1.674057 CCTATGGATCCGGACCTGC 59.326 63.158 6.12 0.00 0.00 4.85
96 97 0.833834 CCTATGGATCCGGACCTGCT 60.834 60.000 6.12 0.00 0.00 4.24
97 98 0.605589 CTATGGATCCGGACCTGCTC 59.394 60.000 6.12 0.00 0.00 4.26
98 99 0.105709 TATGGATCCGGACCTGCTCA 60.106 55.000 6.12 0.00 0.00 4.26
99 100 0.982852 ATGGATCCGGACCTGCTCAA 60.983 55.000 6.12 0.00 0.00 3.02
100 101 1.144936 GGATCCGGACCTGCTCAAG 59.855 63.158 6.12 0.00 0.00 3.02
112 113 3.182341 CTGCTCAAGGAGGAAGAGATG 57.818 52.381 0.00 0.00 27.87 2.90
113 114 1.836166 TGCTCAAGGAGGAAGAGATGG 59.164 52.381 0.00 0.00 0.00 3.51
114 115 1.836802 GCTCAAGGAGGAAGAGATGGT 59.163 52.381 0.00 0.00 0.00 3.55
115 116 2.419851 GCTCAAGGAGGAAGAGATGGTG 60.420 54.545 0.00 0.00 0.00 4.17
116 117 1.556911 TCAAGGAGGAAGAGATGGTGC 59.443 52.381 0.00 0.00 0.00 5.01
117 118 1.558756 CAAGGAGGAAGAGATGGTGCT 59.441 52.381 0.00 0.00 0.00 4.40
118 119 1.202330 AGGAGGAAGAGATGGTGCTG 58.798 55.000 0.00 0.00 0.00 4.41
119 120 0.179936 GGAGGAAGAGATGGTGCTGG 59.820 60.000 0.00 0.00 0.00 4.85
120 121 1.198713 GAGGAAGAGATGGTGCTGGA 58.801 55.000 0.00 0.00 0.00 3.86
121 122 1.767681 GAGGAAGAGATGGTGCTGGAT 59.232 52.381 0.00 0.00 0.00 3.41
122 123 1.767681 AGGAAGAGATGGTGCTGGATC 59.232 52.381 0.00 0.00 0.00 3.36
123 124 1.539929 GGAAGAGATGGTGCTGGATCG 60.540 57.143 0.00 0.00 0.00 3.69
124 125 1.137872 GAAGAGATGGTGCTGGATCGT 59.862 52.381 0.00 0.00 0.00 3.73
125 126 0.463204 AGAGATGGTGCTGGATCGTG 59.537 55.000 0.00 0.00 0.00 4.35
126 127 0.176680 GAGATGGTGCTGGATCGTGT 59.823 55.000 0.00 0.00 0.00 4.49
127 128 1.409064 GAGATGGTGCTGGATCGTGTA 59.591 52.381 0.00 0.00 0.00 2.90
128 129 1.137086 AGATGGTGCTGGATCGTGTAC 59.863 52.381 0.00 0.00 0.00 2.90
129 130 1.137086 GATGGTGCTGGATCGTGTACT 59.863 52.381 0.00 0.00 0.00 2.73
130 131 1.842052 TGGTGCTGGATCGTGTACTA 58.158 50.000 0.00 0.00 0.00 1.82
131 132 1.749063 TGGTGCTGGATCGTGTACTAG 59.251 52.381 0.00 0.00 0.00 2.57
132 133 1.536284 GGTGCTGGATCGTGTACTAGC 60.536 57.143 0.00 0.00 40.20 3.42
133 134 0.380733 TGCTGGATCGTGTACTAGCG 59.619 55.000 0.00 0.00 42.10 4.26
134 135 0.317938 GCTGGATCGTGTACTAGCGG 60.318 60.000 0.00 0.00 31.80 5.52
135 136 0.317938 CTGGATCGTGTACTAGCGGC 60.318 60.000 0.00 0.00 0.00 6.53
136 137 1.370172 GGATCGTGTACTAGCGGCG 60.370 63.158 0.51 0.51 0.00 6.46
137 138 1.370172 GATCGTGTACTAGCGGCGG 60.370 63.158 9.78 0.00 0.00 6.13
138 139 3.480225 ATCGTGTACTAGCGGCGGC 62.480 63.158 9.78 8.43 40.37 6.53
140 141 4.487412 GTGTACTAGCGGCGGCGT 62.487 66.667 32.35 20.67 46.35 5.68
141 142 4.485834 TGTACTAGCGGCGGCGTG 62.486 66.667 32.35 23.24 46.35 5.34
153 154 4.175337 GGCGTGGAGGCATGGCTA 62.175 66.667 23.39 4.41 45.92 3.93
154 155 2.124736 GCGTGGAGGCATGGCTAA 60.125 61.111 23.39 11.00 0.00 3.09
155 156 2.472909 GCGTGGAGGCATGGCTAAC 61.473 63.158 23.39 20.91 0.00 2.34
156 157 1.078497 CGTGGAGGCATGGCTAACA 60.078 57.895 23.39 20.50 0.00 2.41
157 158 1.091771 CGTGGAGGCATGGCTAACAG 61.092 60.000 23.39 14.66 0.00 3.16
158 159 0.749454 GTGGAGGCATGGCTAACAGG 60.749 60.000 23.39 0.00 0.00 4.00
164 165 2.983433 CATGGCTAACAGGCTCGAG 58.017 57.895 8.45 8.45 41.96 4.04
165 166 0.176680 CATGGCTAACAGGCTCGAGT 59.823 55.000 15.13 0.00 41.96 4.18
166 167 0.176680 ATGGCTAACAGGCTCGAGTG 59.823 55.000 15.13 7.93 41.96 3.51
167 168 1.153549 GGCTAACAGGCTCGAGTGG 60.154 63.158 15.13 6.44 37.85 4.00
168 169 1.811679 GCTAACAGGCTCGAGTGGC 60.812 63.158 15.13 3.29 0.00 5.01
169 170 1.517257 CTAACAGGCTCGAGTGGCG 60.517 63.158 15.13 3.09 42.69 5.69
170 171 2.890847 CTAACAGGCTCGAGTGGCGG 62.891 65.000 15.13 5.54 41.33 6.13
179 180 4.821589 GAGTGGCGGCGAAGGGAG 62.822 72.222 12.98 0.00 0.00 4.30
183 184 4.404098 GGCGGCGAAGGGAGGAAA 62.404 66.667 12.98 0.00 0.00 3.13
184 185 2.820037 GCGGCGAAGGGAGGAAAG 60.820 66.667 12.98 0.00 0.00 2.62
185 186 2.978824 CGGCGAAGGGAGGAAAGA 59.021 61.111 0.00 0.00 0.00 2.52
186 187 1.153549 CGGCGAAGGGAGGAAAGAG 60.154 63.158 0.00 0.00 0.00 2.85
187 188 1.222113 GGCGAAGGGAGGAAAGAGG 59.778 63.158 0.00 0.00 0.00 3.69
188 189 1.450491 GCGAAGGGAGGAAAGAGGC 60.450 63.158 0.00 0.00 0.00 4.70
189 190 1.153549 CGAAGGGAGGAAAGAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
190 191 1.222113 GAAGGGAGGAAAGAGGCGG 59.778 63.158 0.00 0.00 0.00 6.13
191 192 1.229529 AAGGGAGGAAAGAGGCGGA 60.230 57.895 0.00 0.00 0.00 5.54
192 193 0.621862 AAGGGAGGAAAGAGGCGGAT 60.622 55.000 0.00 0.00 0.00 4.18
193 194 1.147153 GGGAGGAAAGAGGCGGATG 59.853 63.158 0.00 0.00 0.00 3.51
194 195 1.627297 GGGAGGAAAGAGGCGGATGT 61.627 60.000 0.00 0.00 0.00 3.06
195 196 0.462759 GGAGGAAAGAGGCGGATGTG 60.463 60.000 0.00 0.00 0.00 3.21
196 197 1.078143 AGGAAAGAGGCGGATGTGC 60.078 57.895 0.00 0.00 0.00 4.57
197 198 1.078143 GGAAAGAGGCGGATGTGCT 60.078 57.895 0.00 0.00 34.52 4.40
198 199 0.178068 GGAAAGAGGCGGATGTGCTA 59.822 55.000 0.00 0.00 34.52 3.49
199 200 1.576356 GAAAGAGGCGGATGTGCTAG 58.424 55.000 0.00 0.00 34.52 3.42
200 201 0.179000 AAAGAGGCGGATGTGCTAGG 59.821 55.000 0.00 0.00 34.52 3.02
201 202 1.690219 AAGAGGCGGATGTGCTAGGG 61.690 60.000 0.00 0.00 34.52 3.53
202 203 3.816367 GAGGCGGATGTGCTAGGGC 62.816 68.421 0.00 0.00 39.26 5.19
203 204 3.866582 GGCGGATGTGCTAGGGCT 61.867 66.667 0.00 0.00 39.59 5.19
204 205 2.590007 GCGGATGTGCTAGGGCTG 60.590 66.667 0.00 0.00 39.59 4.85
205 206 2.109799 CGGATGTGCTAGGGCTGG 59.890 66.667 0.00 0.00 39.59 4.85
206 207 2.512896 GGATGTGCTAGGGCTGGG 59.487 66.667 0.00 0.00 39.59 4.45
207 208 2.512896 GATGTGCTAGGGCTGGGG 59.487 66.667 0.00 0.00 39.59 4.96
208 209 3.099170 ATGTGCTAGGGCTGGGGG 61.099 66.667 0.00 0.00 39.59 5.40
225 226 3.199891 GCGTCGGCCGGCTTAAAT 61.200 61.111 29.47 0.00 36.94 1.40
226 227 1.884004 GCGTCGGCCGGCTTAAATA 60.884 57.895 29.47 0.34 36.94 1.40
227 228 1.828331 GCGTCGGCCGGCTTAAATAG 61.828 60.000 29.47 11.46 36.94 1.73
297 298 4.467084 GAGGCGCCCGTTGGATCA 62.467 66.667 26.15 0.00 0.00 2.92
298 299 3.757248 GAGGCGCCCGTTGGATCAT 62.757 63.158 26.15 0.00 0.00 2.45
299 300 3.279875 GGCGCCCGTTGGATCATC 61.280 66.667 18.11 0.00 0.00 2.92
300 301 3.640000 GCGCCCGTTGGATCATCG 61.640 66.667 0.00 0.00 0.00 3.84
301 302 2.967076 CGCCCGTTGGATCATCGG 60.967 66.667 13.13 13.13 43.71 4.18
304 305 4.954933 CCGTTGGATCATCGGGTT 57.045 55.556 12.50 0.00 41.37 4.11
305 306 3.168773 CCGTTGGATCATCGGGTTT 57.831 52.632 12.50 0.00 41.37 3.27
306 307 1.459450 CCGTTGGATCATCGGGTTTT 58.541 50.000 12.50 0.00 41.37 2.43
307 308 1.400494 CCGTTGGATCATCGGGTTTTC 59.600 52.381 12.50 0.00 41.37 2.29
308 309 1.400494 CGTTGGATCATCGGGTTTTCC 59.600 52.381 0.00 0.00 39.75 3.13
317 318 2.346365 GGGTTTTCCGGCGAGTCT 59.654 61.111 9.30 0.00 41.82 3.24
318 319 1.593265 GGGTTTTCCGGCGAGTCTA 59.407 57.895 9.30 0.00 41.82 2.59
319 320 0.177373 GGGTTTTCCGGCGAGTCTAT 59.823 55.000 9.30 0.00 41.82 1.98
320 321 1.287425 GGTTTTCCGGCGAGTCTATG 58.713 55.000 9.30 0.00 0.00 2.23
321 322 1.405121 GGTTTTCCGGCGAGTCTATGT 60.405 52.381 9.30 0.00 0.00 2.29
322 323 1.659098 GTTTTCCGGCGAGTCTATGTG 59.341 52.381 9.30 0.00 0.00 3.21
323 324 0.174845 TTTCCGGCGAGTCTATGTGG 59.825 55.000 9.30 0.00 0.00 4.17
324 325 1.672854 TTCCGGCGAGTCTATGTGGG 61.673 60.000 9.30 0.00 0.00 4.61
325 326 2.417516 CGGCGAGTCTATGTGGGG 59.582 66.667 0.00 0.00 0.00 4.96
326 327 2.109181 GGCGAGTCTATGTGGGGC 59.891 66.667 0.00 0.00 0.00 5.80
327 328 2.109181 GCGAGTCTATGTGGGGCC 59.891 66.667 0.00 0.00 0.00 5.80
328 329 2.731571 GCGAGTCTATGTGGGGCCA 61.732 63.158 4.39 0.00 0.00 5.36
329 330 1.144057 CGAGTCTATGTGGGGCCAC 59.856 63.158 4.39 0.00 46.33 5.01
343 344 4.129737 CCACGTCGTCAGGCCGAT 62.130 66.667 0.00 0.00 39.34 4.18
344 345 2.767445 CCACGTCGTCAGGCCGATA 61.767 63.158 0.00 0.00 39.34 2.92
345 346 1.359117 CACGTCGTCAGGCCGATAT 59.641 57.895 0.00 0.00 39.34 1.63
346 347 0.660595 CACGTCGTCAGGCCGATATC 60.661 60.000 0.00 0.00 39.34 1.63
347 348 1.081376 CGTCGTCAGGCCGATATCC 60.081 63.158 0.00 0.00 39.34 2.59
348 349 1.081376 GTCGTCAGGCCGATATCCG 60.081 63.158 0.00 0.00 39.34 4.18
349 350 2.430921 CGTCAGGCCGATATCCGC 60.431 66.667 7.44 7.44 36.84 5.54
350 351 2.048127 GTCAGGCCGATATCCGCC 60.048 66.667 23.01 23.01 36.84 6.13
351 352 3.311110 TCAGGCCGATATCCGCCC 61.311 66.667 25.66 11.11 35.74 6.13
352 353 3.625897 CAGGCCGATATCCGCCCA 61.626 66.667 25.66 0.00 38.42 5.36
353 354 2.607750 AGGCCGATATCCGCCCAT 60.608 61.111 25.66 10.42 38.42 4.00
354 355 1.305802 AGGCCGATATCCGCCCATA 60.306 57.895 25.66 0.00 38.42 2.74
355 356 0.691078 AGGCCGATATCCGCCCATAT 60.691 55.000 25.66 9.48 38.42 1.78
356 357 0.180406 GGCCGATATCCGCCCATATT 59.820 55.000 20.72 0.00 35.56 1.28
357 358 1.408266 GGCCGATATCCGCCCATATTT 60.408 52.381 20.72 0.00 35.56 1.40
358 359 1.670811 GCCGATATCCGCCCATATTTG 59.329 52.381 4.86 0.00 36.84 2.32
359 360 2.679639 GCCGATATCCGCCCATATTTGA 60.680 50.000 4.86 0.00 36.84 2.69
360 361 3.198068 CCGATATCCGCCCATATTTGAG 58.802 50.000 0.00 0.00 36.84 3.02
361 362 2.609459 CGATATCCGCCCATATTTGAGC 59.391 50.000 0.00 0.00 0.00 4.26
362 363 3.679917 CGATATCCGCCCATATTTGAGCT 60.680 47.826 0.00 0.00 0.00 4.09
363 364 1.901591 ATCCGCCCATATTTGAGCTG 58.098 50.000 0.00 0.00 0.00 4.24
364 365 0.179020 TCCGCCCATATTTGAGCTGG 60.179 55.000 0.00 0.00 0.00 4.85
370 371 3.424703 CCCATATTTGAGCTGGGTATGG 58.575 50.000 13.34 13.34 43.93 2.74
371 372 3.424703 CCATATTTGAGCTGGGTATGGG 58.575 50.000 12.79 0.00 38.61 4.00
372 373 3.424703 CATATTTGAGCTGGGTATGGGG 58.575 50.000 0.00 0.00 0.00 4.96
373 374 0.557729 ATTTGAGCTGGGTATGGGGG 59.442 55.000 0.00 0.00 0.00 5.40
396 397 3.550656 GGTCAGTCCGAGCGTTTG 58.449 61.111 0.00 0.00 31.26 2.93
397 398 1.006571 GGTCAGTCCGAGCGTTTGA 60.007 57.895 0.00 0.00 31.26 2.69
398 399 1.009389 GGTCAGTCCGAGCGTTTGAG 61.009 60.000 0.00 0.00 31.26 3.02
399 400 1.009389 GTCAGTCCGAGCGTTTGAGG 61.009 60.000 0.00 0.00 0.00 3.86
400 401 1.738099 CAGTCCGAGCGTTTGAGGG 60.738 63.158 0.00 0.00 0.00 4.30
401 402 3.119096 GTCCGAGCGTTTGAGGGC 61.119 66.667 0.00 0.00 0.00 5.19
402 403 4.388499 TCCGAGCGTTTGAGGGCC 62.388 66.667 0.00 0.00 0.00 5.80
403 404 4.697756 CCGAGCGTTTGAGGGCCA 62.698 66.667 6.18 0.00 0.00 5.36
404 405 2.436646 CGAGCGTTTGAGGGCCAT 60.437 61.111 6.18 0.00 0.00 4.40
405 406 2.040544 CGAGCGTTTGAGGGCCATT 61.041 57.895 6.18 0.00 0.00 3.16
406 407 1.586154 CGAGCGTTTGAGGGCCATTT 61.586 55.000 6.18 0.00 0.00 2.32
407 408 0.109132 GAGCGTTTGAGGGCCATTTG 60.109 55.000 6.18 0.00 0.00 2.32
408 409 0.539438 AGCGTTTGAGGGCCATTTGA 60.539 50.000 6.18 0.00 0.00 2.69
409 410 0.388520 GCGTTTGAGGGCCATTTGAC 60.389 55.000 6.18 0.00 0.00 3.18
410 411 0.958091 CGTTTGAGGGCCATTTGACA 59.042 50.000 6.18 0.00 0.00 3.58
411 412 1.068333 CGTTTGAGGGCCATTTGACAG 60.068 52.381 6.18 0.00 0.00 3.51
412 413 1.273327 GTTTGAGGGCCATTTGACAGG 59.727 52.381 6.18 0.00 0.00 4.00
413 414 0.482446 TTGAGGGCCATTTGACAGGT 59.518 50.000 6.18 0.00 0.00 4.00
414 415 0.038166 TGAGGGCCATTTGACAGGTC 59.962 55.000 6.18 0.00 0.00 3.85
415 416 4.018409 GGGCCATTTGACAGGTCC 57.982 61.111 4.39 0.00 43.46 4.46
416 417 4.841441 GGCCATTTGACAGGTCCA 57.159 55.556 0.00 0.00 0.00 4.02
417 418 3.288099 GGCCATTTGACAGGTCCAT 57.712 52.632 0.00 0.00 0.00 3.41
418 419 1.560505 GGCCATTTGACAGGTCCATT 58.439 50.000 0.00 0.00 0.00 3.16
419 420 1.901833 GGCCATTTGACAGGTCCATTT 59.098 47.619 0.00 0.00 0.00 2.32
420 421 2.354003 GGCCATTTGACAGGTCCATTTG 60.354 50.000 0.00 0.00 0.00 2.32
421 422 2.354003 GCCATTTGACAGGTCCATTTGG 60.354 50.000 0.00 0.00 0.00 3.28
422 423 2.234414 CCATTTGACAGGTCCATTTGGG 59.766 50.000 0.00 0.00 35.41 4.12
423 424 2.765689 TTTGACAGGTCCATTTGGGT 57.234 45.000 0.00 0.00 38.11 4.51
424 425 2.286365 TTGACAGGTCCATTTGGGTC 57.714 50.000 0.00 0.00 38.11 4.46
425 426 1.144691 TGACAGGTCCATTTGGGTCA 58.855 50.000 0.00 0.00 38.11 4.02
426 427 1.496857 TGACAGGTCCATTTGGGTCAA 59.503 47.619 4.54 0.00 38.11 3.18
427 428 2.091610 TGACAGGTCCATTTGGGTCAAA 60.092 45.455 4.54 0.00 37.75 2.69
428 429 2.962421 GACAGGTCCATTTGGGTCAAAA 59.038 45.455 0.00 0.00 36.90 2.44
429 430 3.379452 ACAGGTCCATTTGGGTCAAAAA 58.621 40.909 0.00 0.00 36.90 1.94
430 431 3.973305 ACAGGTCCATTTGGGTCAAAAAT 59.027 39.130 0.00 0.00 36.90 1.82
431 432 4.040339 ACAGGTCCATTTGGGTCAAAAATC 59.960 41.667 0.00 0.00 36.90 2.17
432 433 3.258123 AGGTCCATTTGGGTCAAAAATCG 59.742 43.478 0.00 0.00 36.90 3.34
433 434 3.006430 GGTCCATTTGGGTCAAAAATCGT 59.994 43.478 0.00 0.00 36.90 3.73
434 435 3.987220 GTCCATTTGGGTCAAAAATCGTG 59.013 43.478 0.00 0.00 36.90 4.35
435 436 3.891977 TCCATTTGGGTCAAAAATCGTGA 59.108 39.130 0.00 0.00 36.90 4.35
436 437 3.987220 CCATTTGGGTCAAAAATCGTGAC 59.013 43.478 0.00 0.00 43.87 3.67
440 441 3.378013 GTCAAAAATCGTGACCGGC 57.622 52.632 0.00 0.00 39.62 6.13
441 442 0.109919 GTCAAAAATCGTGACCGGCC 60.110 55.000 0.00 0.00 39.62 6.13
442 443 1.211709 CAAAAATCGTGACCGGCCC 59.788 57.895 0.00 0.00 33.95 5.80
443 444 2.329614 AAAAATCGTGACCGGCCCG 61.330 57.895 0.00 0.00 33.95 6.13
444 445 2.734948 AAAAATCGTGACCGGCCCGA 62.735 55.000 3.71 12.28 34.79 5.14
445 446 3.945304 AAATCGTGACCGGCCCGAC 62.945 63.158 3.71 0.00 32.86 4.79
455 456 4.580551 GGCCCGACCGGACGTATG 62.581 72.222 23.92 13.32 37.50 2.39
456 457 3.520862 GCCCGACCGGACGTATGA 61.521 66.667 23.92 0.00 37.50 2.15
457 458 2.719979 CCCGACCGGACGTATGAG 59.280 66.667 23.92 8.86 37.50 2.90
458 459 1.820906 CCCGACCGGACGTATGAGA 60.821 63.158 23.92 0.00 37.50 3.27
459 460 1.354506 CCGACCGGACGTATGAGAC 59.645 63.158 23.92 0.00 37.50 3.36
472 473 2.124277 ATGAGACGGGTTTAAAGGGC 57.876 50.000 0.00 0.00 0.00 5.19
473 474 0.320946 TGAGACGGGTTTAAAGGGCG 60.321 55.000 0.00 0.00 0.00 6.13
474 475 0.321034 GAGACGGGTTTAAAGGGCGT 60.321 55.000 0.00 0.00 0.00 5.68
475 476 0.321034 AGACGGGTTTAAAGGGCGTC 60.321 55.000 0.00 0.00 0.00 5.19
476 477 1.629345 GACGGGTTTAAAGGGCGTCG 61.629 60.000 0.00 0.00 0.00 5.12
477 478 2.392974 CGGGTTTAAAGGGCGTCGG 61.393 63.158 0.00 0.00 0.00 4.79
478 479 2.042259 GGGTTTAAAGGGCGTCGGG 61.042 63.158 0.00 0.00 0.00 5.14
479 480 2.693762 GGTTTAAAGGGCGTCGGGC 61.694 63.158 0.00 0.00 42.51 6.13
480 481 1.967494 GTTTAAAGGGCGTCGGGCA 60.967 57.895 0.00 0.00 46.16 5.36
481 482 1.001887 TTTAAAGGGCGTCGGGCAT 60.002 52.632 0.00 0.00 46.16 4.40
482 483 0.252479 TTTAAAGGGCGTCGGGCATA 59.748 50.000 0.00 0.00 46.16 3.14
483 484 0.462403 TTAAAGGGCGTCGGGCATAC 60.462 55.000 0.00 0.00 46.16 2.39
484 485 2.314415 TAAAGGGCGTCGGGCATACC 62.314 60.000 0.00 0.00 46.16 2.73
495 496 3.496675 GGCATACCCCTTTCACCTC 57.503 57.895 0.00 0.00 0.00 3.85
496 497 0.623723 GGCATACCCCTTTCACCTCA 59.376 55.000 0.00 0.00 0.00 3.86
497 498 1.682087 GGCATACCCCTTTCACCTCAC 60.682 57.143 0.00 0.00 0.00 3.51
498 499 1.682087 GCATACCCCTTTCACCTCACC 60.682 57.143 0.00 0.00 0.00 4.02
499 500 1.064685 CATACCCCTTTCACCTCACCC 60.065 57.143 0.00 0.00 0.00 4.61
500 501 0.843343 TACCCCTTTCACCTCACCCC 60.843 60.000 0.00 0.00 0.00 4.95
501 502 1.852626 CCCCTTTCACCTCACCCCT 60.853 63.158 0.00 0.00 0.00 4.79
502 503 1.685820 CCCTTTCACCTCACCCCTC 59.314 63.158 0.00 0.00 0.00 4.30
503 504 1.296715 CCTTTCACCTCACCCCTCG 59.703 63.158 0.00 0.00 0.00 4.63
504 505 1.376037 CTTTCACCTCACCCCTCGC 60.376 63.158 0.00 0.00 0.00 5.03
505 506 3.234630 TTTCACCTCACCCCTCGCG 62.235 63.158 0.00 0.00 0.00 5.87
506 507 4.988716 TCACCTCACCCCTCGCGT 62.989 66.667 5.77 0.00 0.00 6.01
507 508 3.066190 CACCTCACCCCTCGCGTA 61.066 66.667 5.77 0.00 0.00 4.42
508 509 3.066814 ACCTCACCCCTCGCGTAC 61.067 66.667 5.77 0.00 0.00 3.67
509 510 3.834799 CCTCACCCCTCGCGTACC 61.835 72.222 5.77 0.00 0.00 3.34
510 511 4.189188 CTCACCCCTCGCGTACCG 62.189 72.222 5.77 0.00 38.61 4.02
517 518 3.762247 CTCGCGTACCGGGGGAAA 61.762 66.667 6.32 0.00 42.96 3.13
518 519 3.995219 CTCGCGTACCGGGGGAAAC 62.995 68.421 6.32 0.00 42.96 2.78
540 541 2.033448 GGACATGTCCGGGCAACA 59.967 61.111 28.52 4.46 40.36 3.33
541 542 2.040544 GGACATGTCCGGGCAACAG 61.041 63.158 28.52 9.14 40.36 3.16
542 543 2.672996 ACATGTCCGGGCAACAGC 60.673 61.111 15.45 0.00 39.74 4.40
543 544 3.803082 CATGTCCGGGCAACAGCG 61.803 66.667 15.45 0.00 39.74 5.18
544 545 4.329545 ATGTCCGGGCAACAGCGT 62.330 61.111 15.45 0.00 39.74 5.07
545 546 4.980805 TGTCCGGGCAACAGCGTC 62.981 66.667 6.10 0.00 39.74 5.19
550 551 2.742372 GGGCAACAGCGTCGTCAT 60.742 61.111 0.00 0.00 39.74 3.06
551 552 2.740714 GGGCAACAGCGTCGTCATC 61.741 63.158 0.00 0.00 39.74 2.92
552 553 2.391821 GCAACAGCGTCGTCATCG 59.608 61.111 0.00 0.00 38.55 3.84
553 554 2.372690 GCAACAGCGTCGTCATCGT 61.373 57.895 0.00 0.00 38.33 3.73
554 555 1.696644 CAACAGCGTCGTCATCGTC 59.303 57.895 0.00 0.00 38.33 4.20
555 556 1.796355 AACAGCGTCGTCATCGTCG 60.796 57.895 0.00 3.42 46.99 5.12
560 561 2.340595 CGTCGTCATCGTCGCGATC 61.341 63.158 14.06 5.25 45.19 3.69
561 562 2.004489 GTCGTCATCGTCGCGATCC 61.004 63.158 14.06 0.00 45.19 3.36
562 563 2.178235 TCGTCATCGTCGCGATCCT 61.178 57.895 14.06 0.00 45.19 3.24
563 564 1.298413 CGTCATCGTCGCGATCCTT 60.298 57.895 14.06 0.00 45.19 3.36
564 565 1.262824 CGTCATCGTCGCGATCCTTC 61.263 60.000 14.06 0.00 45.19 3.46
565 566 0.029567 GTCATCGTCGCGATCCTTCT 59.970 55.000 14.06 0.00 45.19 2.85
566 567 0.738975 TCATCGTCGCGATCCTTCTT 59.261 50.000 14.06 0.00 45.19 2.52
567 568 0.848942 CATCGTCGCGATCCTTCTTG 59.151 55.000 14.06 0.00 45.19 3.02
568 569 0.738975 ATCGTCGCGATCCTTCTTGA 59.261 50.000 14.06 0.91 43.45 3.02
569 570 0.098905 TCGTCGCGATCCTTCTTGAG 59.901 55.000 14.06 0.00 0.00 3.02
570 571 4.462118 ATCGTCGCGATCCTTCTTGAGG 62.462 54.545 14.06 0.00 43.45 3.86
571 572 0.528684 GTCGCGATCCTTCTTGAGGG 60.529 60.000 14.06 0.00 46.31 4.30
572 573 0.970937 TCGCGATCCTTCTTGAGGGT 60.971 55.000 3.71 0.00 46.31 4.34
573 574 0.807667 CGCGATCCTTCTTGAGGGTG 60.808 60.000 0.00 0.00 46.31 4.61
574 575 0.250513 GCGATCCTTCTTGAGGGTGT 59.749 55.000 0.00 0.00 46.31 4.16
575 576 1.339151 GCGATCCTTCTTGAGGGTGTT 60.339 52.381 0.00 0.00 46.31 3.32
576 577 2.350522 CGATCCTTCTTGAGGGTGTTG 58.649 52.381 0.00 0.00 46.31 3.33
577 578 2.289694 CGATCCTTCTTGAGGGTGTTGT 60.290 50.000 0.00 0.00 46.31 3.32
578 579 3.756117 GATCCTTCTTGAGGGTGTTGTT 58.244 45.455 0.00 0.00 46.31 2.83
579 580 3.662759 TCCTTCTTGAGGGTGTTGTTT 57.337 42.857 0.00 0.00 46.31 2.83
580 581 3.287222 TCCTTCTTGAGGGTGTTGTTTG 58.713 45.455 0.00 0.00 46.31 2.93
581 582 2.362077 CCTTCTTGAGGGTGTTGTTTGG 59.638 50.000 0.00 0.00 42.26 3.28
582 583 2.818751 TCTTGAGGGTGTTGTTTGGT 57.181 45.000 0.00 0.00 0.00 3.67
583 584 3.935818 TCTTGAGGGTGTTGTTTGGTA 57.064 42.857 0.00 0.00 0.00 3.25
584 585 4.447138 TCTTGAGGGTGTTGTTTGGTAT 57.553 40.909 0.00 0.00 0.00 2.73
585 586 4.141287 TCTTGAGGGTGTTGTTTGGTATG 58.859 43.478 0.00 0.00 0.00 2.39
586 587 2.235016 TGAGGGTGTTGTTTGGTATGC 58.765 47.619 0.00 0.00 0.00 3.14
587 588 1.199097 GAGGGTGTTGTTTGGTATGCG 59.801 52.381 0.00 0.00 0.00 4.73
588 589 0.242555 GGGTGTTGTTTGGTATGCGG 59.757 55.000 0.00 0.00 0.00 5.69
589 590 0.388006 GGTGTTGTTTGGTATGCGGC 60.388 55.000 0.00 0.00 0.00 6.53
590 591 0.727793 GTGTTGTTTGGTATGCGGCG 60.728 55.000 0.51 0.51 0.00 6.46
591 592 1.154112 GTTGTTTGGTATGCGGCGG 60.154 57.895 9.78 0.00 0.00 6.13
592 593 1.601197 TTGTTTGGTATGCGGCGGT 60.601 52.632 9.78 0.00 0.00 5.68
593 594 1.579084 TTGTTTGGTATGCGGCGGTC 61.579 55.000 9.78 0.00 0.00 4.79
594 595 2.437002 TTTGGTATGCGGCGGTCC 60.437 61.111 9.78 0.00 0.00 4.46
604 605 2.280186 GGCGGTCCGGAATGCTAG 60.280 66.667 23.76 6.87 0.00 3.42
605 606 2.280186 GCGGTCCGGAATGCTAGG 60.280 66.667 19.16 0.50 0.00 3.02
606 607 2.792947 GCGGTCCGGAATGCTAGGA 61.793 63.158 19.16 0.00 0.00 2.94
607 608 1.364171 CGGTCCGGAATGCTAGGAG 59.636 63.158 5.23 0.00 34.29 3.69
608 609 1.069935 GGTCCGGAATGCTAGGAGC 59.930 63.158 5.23 2.92 43.87 4.70
609 610 1.300233 GTCCGGAATGCTAGGAGCG 60.300 63.158 5.23 0.00 46.26 5.03
610 611 1.756950 TCCGGAATGCTAGGAGCGT 60.757 57.895 0.00 0.00 46.26 5.07
611 612 1.592669 CCGGAATGCTAGGAGCGTG 60.593 63.158 0.00 0.00 46.26 5.34
612 613 1.592669 CGGAATGCTAGGAGCGTGG 60.593 63.158 0.00 0.00 46.26 4.94
613 614 1.522569 GGAATGCTAGGAGCGTGGT 59.477 57.895 0.00 0.00 46.26 4.16
614 615 0.811616 GGAATGCTAGGAGCGTGGTG 60.812 60.000 0.00 0.00 46.26 4.17
615 616 0.811616 GAATGCTAGGAGCGTGGTGG 60.812 60.000 0.00 0.00 46.26 4.61
616 617 1.553690 AATGCTAGGAGCGTGGTGGT 61.554 55.000 0.00 0.00 46.26 4.16
617 618 0.686441 ATGCTAGGAGCGTGGTGGTA 60.686 55.000 0.00 0.00 46.26 3.25
618 619 0.686441 TGCTAGGAGCGTGGTGGTAT 60.686 55.000 0.00 0.00 46.26 2.73
619 620 0.464452 GCTAGGAGCGTGGTGGTATT 59.536 55.000 0.00 0.00 0.00 1.89
620 621 1.134491 GCTAGGAGCGTGGTGGTATTT 60.134 52.381 0.00 0.00 0.00 1.40
621 622 2.679930 GCTAGGAGCGTGGTGGTATTTT 60.680 50.000 0.00 0.00 0.00 1.82
622 623 2.109425 AGGAGCGTGGTGGTATTTTC 57.891 50.000 0.00 0.00 0.00 2.29
623 624 1.092348 GGAGCGTGGTGGTATTTTCC 58.908 55.000 0.00 0.00 0.00 3.13
624 625 0.725117 GAGCGTGGTGGTATTTTCCG 59.275 55.000 0.00 0.00 0.00 4.30
625 626 0.675522 AGCGTGGTGGTATTTTCCGG 60.676 55.000 0.00 0.00 0.00 5.14
626 627 0.956902 GCGTGGTGGTATTTTCCGGT 60.957 55.000 0.00 0.00 0.00 5.28
627 628 0.800012 CGTGGTGGTATTTTCCGGTG 59.200 55.000 0.00 0.00 0.00 4.94
628 629 1.170442 GTGGTGGTATTTTCCGGTGG 58.830 55.000 0.00 0.00 0.00 4.61
629 630 0.038455 TGGTGGTATTTTCCGGTGGG 59.962 55.000 0.00 0.00 0.00 4.61
630 631 1.317431 GGTGGTATTTTCCGGTGGGC 61.317 60.000 0.00 0.00 0.00 5.36
631 632 1.377463 TGGTATTTTCCGGTGGGCG 60.377 57.895 0.00 0.00 0.00 6.13
632 633 2.767445 GGTATTTTCCGGTGGGCGC 61.767 63.158 0.00 0.00 0.00 6.53
633 634 2.820479 TATTTTCCGGTGGGCGCG 60.820 61.111 0.00 0.00 0.00 6.86
650 651 4.467084 GGCGGTTGCGGATCCTCA 62.467 66.667 10.75 4.97 44.10 3.86
651 652 2.203070 GCGGTTGCGGATCCTCAT 60.203 61.111 10.75 0.00 0.00 2.90
652 653 2.247437 GCGGTTGCGGATCCTCATC 61.247 63.158 10.75 7.23 0.00 2.92
653 654 1.951130 CGGTTGCGGATCCTCATCG 60.951 63.158 10.75 11.34 0.00 3.84
654 655 1.144057 GGTTGCGGATCCTCATCGT 59.856 57.895 10.75 0.00 0.00 3.73
655 656 0.462047 GGTTGCGGATCCTCATCGTT 60.462 55.000 10.75 0.00 0.00 3.85
656 657 1.369625 GTTGCGGATCCTCATCGTTT 58.630 50.000 10.75 0.00 0.00 3.60
657 658 1.737793 GTTGCGGATCCTCATCGTTTT 59.262 47.619 10.75 0.00 0.00 2.43
658 659 1.651987 TGCGGATCCTCATCGTTTTC 58.348 50.000 10.75 0.00 0.00 2.29
659 660 0.577269 GCGGATCCTCATCGTTTTCG 59.423 55.000 10.75 0.00 45.64 3.46
660 661 1.922570 CGGATCCTCATCGTTTTCGT 58.077 50.000 10.75 0.00 44.46 3.85
661 662 2.268298 CGGATCCTCATCGTTTTCGTT 58.732 47.619 10.75 0.00 44.46 3.85
662 663 2.029244 CGGATCCTCATCGTTTTCGTTG 59.971 50.000 10.75 0.00 44.46 4.10
663 664 3.259064 GGATCCTCATCGTTTTCGTTGA 58.741 45.455 3.84 0.00 45.67 3.18
664 665 3.871594 GGATCCTCATCGTTTTCGTTGAT 59.128 43.478 3.84 0.00 46.30 2.57
665 666 4.025647 GGATCCTCATCGTTTTCGTTGATC 60.026 45.833 3.84 0.00 46.30 2.92
666 667 3.259064 TCCTCATCGTTTTCGTTGATCC 58.741 45.455 0.00 0.00 46.30 3.36
667 668 2.029244 CCTCATCGTTTTCGTTGATCCG 59.971 50.000 0.00 0.00 46.30 4.18
668 669 1.392168 TCATCGTTTTCGTTGATCCGC 59.608 47.619 0.00 0.00 43.89 5.54
669 670 0.725117 ATCGTTTTCGTTGATCCGCC 59.275 50.000 0.00 0.00 44.46 6.13
670 671 1.225637 CGTTTTCGTTGATCCGCCG 60.226 57.895 0.00 0.00 38.65 6.46
671 672 1.864176 GTTTTCGTTGATCCGCCGT 59.136 52.632 0.00 0.00 0.00 5.68
672 673 0.179233 GTTTTCGTTGATCCGCCGTC 60.179 55.000 0.00 0.00 0.00 4.79
673 674 1.619526 TTTTCGTTGATCCGCCGTCG 61.620 55.000 0.00 0.00 0.00 5.12
674 675 2.752322 TTTCGTTGATCCGCCGTCGT 62.752 55.000 0.00 0.00 0.00 4.34
675 676 2.752322 TTCGTTGATCCGCCGTCGTT 62.752 55.000 0.00 0.00 0.00 3.85
676 677 2.776072 GTTGATCCGCCGTCGTTG 59.224 61.111 0.00 0.00 0.00 4.10
677 678 2.433491 TTGATCCGCCGTCGTTGG 60.433 61.111 0.00 0.00 0.00 3.77
688 689 3.757745 CCGTCGTTGGCATTATTTTCT 57.242 42.857 0.00 0.00 0.00 2.52
689 690 3.680789 CCGTCGTTGGCATTATTTTCTC 58.319 45.455 0.00 0.00 0.00 2.87
690 691 3.374058 CCGTCGTTGGCATTATTTTCTCT 59.626 43.478 0.00 0.00 0.00 3.10
691 692 4.142687 CCGTCGTTGGCATTATTTTCTCTT 60.143 41.667 0.00 0.00 0.00 2.85
692 693 5.022021 CGTCGTTGGCATTATTTTCTCTTC 58.978 41.667 0.00 0.00 0.00 2.87
693 694 5.390461 CGTCGTTGGCATTATTTTCTCTTCA 60.390 40.000 0.00 0.00 0.00 3.02
694 695 6.024049 GTCGTTGGCATTATTTTCTCTTCAG 58.976 40.000 0.00 0.00 0.00 3.02
695 696 5.705441 TCGTTGGCATTATTTTCTCTTCAGT 59.295 36.000 0.00 0.00 0.00 3.41
696 697 6.206634 TCGTTGGCATTATTTTCTCTTCAGTT 59.793 34.615 0.00 0.00 0.00 3.16
697 698 6.863126 CGTTGGCATTATTTTCTCTTCAGTTT 59.137 34.615 0.00 0.00 0.00 2.66
698 699 7.061094 CGTTGGCATTATTTTCTCTTCAGTTTC 59.939 37.037 0.00 0.00 0.00 2.78
699 700 7.765695 TGGCATTATTTTCTCTTCAGTTTCT 57.234 32.000 0.00 0.00 0.00 2.52
700 701 8.181904 TGGCATTATTTTCTCTTCAGTTTCTT 57.818 30.769 0.00 0.00 0.00 2.52
701 702 8.641541 TGGCATTATTTTCTCTTCAGTTTCTTT 58.358 29.630 0.00 0.00 0.00 2.52
702 703 9.481340 GGCATTATTTTCTCTTCAGTTTCTTTT 57.519 29.630 0.00 0.00 0.00 2.27
723 724 4.838665 TTTTGTTTCTTTTGAGCTTGCG 57.161 36.364 0.00 0.00 0.00 4.85
724 725 3.502191 TTGTTTCTTTTGAGCTTGCGT 57.498 38.095 0.00 0.00 0.00 5.24
725 726 2.796304 TGTTTCTTTTGAGCTTGCGTG 58.204 42.857 0.00 0.00 0.00 5.34
726 727 2.163412 TGTTTCTTTTGAGCTTGCGTGT 59.837 40.909 0.00 0.00 0.00 4.49
727 728 2.473530 TTCTTTTGAGCTTGCGTGTG 57.526 45.000 0.00 0.00 0.00 3.82
728 729 0.029300 TCTTTTGAGCTTGCGTGTGC 59.971 50.000 0.00 0.00 43.20 4.57
729 730 0.029834 CTTTTGAGCTTGCGTGTGCT 59.970 50.000 0.00 0.00 43.34 4.40
730 731 0.248580 TTTTGAGCTTGCGTGTGCTG 60.249 50.000 3.19 0.00 43.34 4.41
731 732 1.375853 TTTGAGCTTGCGTGTGCTGT 61.376 50.000 3.19 0.00 43.34 4.40
732 733 2.050639 TTGAGCTTGCGTGTGCTGTG 62.051 55.000 3.19 0.00 43.34 3.66
733 734 3.245948 GAGCTTGCGTGTGCTGTGG 62.246 63.158 3.19 0.00 43.34 4.17
734 735 4.988486 GCTTGCGTGTGCTGTGGC 62.988 66.667 0.00 0.00 43.34 5.01
735 736 4.332637 CTTGCGTGTGCTGTGGCC 62.333 66.667 0.00 0.00 43.34 5.36
745 746 2.975536 CTGTGGCCCCAGCATTTG 59.024 61.111 1.00 0.00 42.56 2.32
746 747 1.909781 CTGTGGCCCCAGCATTTGT 60.910 57.895 1.00 0.00 42.56 2.83
747 748 0.611618 CTGTGGCCCCAGCATTTGTA 60.612 55.000 1.00 0.00 42.56 2.41
748 749 0.040942 TGTGGCCCCAGCATTTGTAT 59.959 50.000 0.00 0.00 42.56 2.29
749 750 0.746659 GTGGCCCCAGCATTTGTATC 59.253 55.000 0.00 0.00 42.56 2.24
750 751 0.751277 TGGCCCCAGCATTTGTATCG 60.751 55.000 0.00 0.00 42.56 2.92
751 752 0.751643 GGCCCCAGCATTTGTATCGT 60.752 55.000 0.00 0.00 42.56 3.73
752 753 0.381801 GCCCCAGCATTTGTATCGTG 59.618 55.000 0.00 0.00 39.53 4.35
753 754 1.750193 CCCCAGCATTTGTATCGTGT 58.250 50.000 0.00 0.00 0.00 4.49
754 755 1.401552 CCCCAGCATTTGTATCGTGTG 59.598 52.381 0.00 0.00 0.00 3.82
755 756 1.401552 CCCAGCATTTGTATCGTGTGG 59.598 52.381 0.00 0.00 0.00 4.17
756 757 2.083774 CCAGCATTTGTATCGTGTGGT 58.916 47.619 0.00 0.00 0.00 4.16
757 758 2.095853 CCAGCATTTGTATCGTGTGGTC 59.904 50.000 0.00 0.00 0.00 4.02
758 759 1.999735 AGCATTTGTATCGTGTGGTCG 59.000 47.619 0.00 0.00 0.00 4.79
759 760 1.730064 GCATTTGTATCGTGTGGTCGT 59.270 47.619 0.00 0.00 0.00 4.34
760 761 2.158841 GCATTTGTATCGTGTGGTCGTT 59.841 45.455 0.00 0.00 0.00 3.85
761 762 3.731855 CATTTGTATCGTGTGGTCGTTG 58.268 45.455 0.00 0.00 0.00 4.10
762 763 1.141645 TTGTATCGTGTGGTCGTTGC 58.858 50.000 0.00 0.00 0.00 4.17
763 764 0.315886 TGTATCGTGTGGTCGTTGCT 59.684 50.000 0.00 0.00 0.00 3.91
764 765 1.269883 TGTATCGTGTGGTCGTTGCTT 60.270 47.619 0.00 0.00 0.00 3.91
765 766 1.796459 GTATCGTGTGGTCGTTGCTTT 59.204 47.619 0.00 0.00 0.00 3.51
766 767 2.157834 ATCGTGTGGTCGTTGCTTTA 57.842 45.000 0.00 0.00 0.00 1.85
767 768 2.157834 TCGTGTGGTCGTTGCTTTAT 57.842 45.000 0.00 0.00 0.00 1.40
768 769 3.300852 TCGTGTGGTCGTTGCTTTATA 57.699 42.857 0.00 0.00 0.00 0.98
769 770 3.651206 TCGTGTGGTCGTTGCTTTATAA 58.349 40.909 0.00 0.00 0.00 0.98
770 771 4.247258 TCGTGTGGTCGTTGCTTTATAAT 58.753 39.130 0.00 0.00 0.00 1.28
771 772 5.409211 TCGTGTGGTCGTTGCTTTATAATA 58.591 37.500 0.00 0.00 0.00 0.98
772 773 6.044046 TCGTGTGGTCGTTGCTTTATAATAT 58.956 36.000 0.00 0.00 0.00 1.28
773 774 7.201835 TCGTGTGGTCGTTGCTTTATAATATA 58.798 34.615 0.00 0.00 0.00 0.86
774 775 7.705752 TCGTGTGGTCGTTGCTTTATAATATAA 59.294 33.333 0.00 0.00 0.00 0.98
775 776 8.329583 CGTGTGGTCGTTGCTTTATAATATAAA 58.670 33.333 5.46 5.46 0.00 1.40
776 777 9.646336 GTGTGGTCGTTGCTTTATAATATAAAG 57.354 33.333 22.11 22.11 37.53 1.85
777 778 9.386010 TGTGGTCGTTGCTTTATAATATAAAGT 57.614 29.630 25.08 0.00 37.00 2.66
778 779 9.646336 GTGGTCGTTGCTTTATAATATAAAGTG 57.354 33.333 25.08 16.31 37.00 3.16
779 780 8.832521 TGGTCGTTGCTTTATAATATAAAGTGG 58.167 33.333 25.08 15.69 37.00 4.00
780 781 8.287503 GGTCGTTGCTTTATAATATAAAGTGGG 58.712 37.037 25.08 15.93 37.00 4.61
781 782 8.287503 GTCGTTGCTTTATAATATAAAGTGGGG 58.712 37.037 25.08 16.18 37.00 4.96
782 783 7.446013 TCGTTGCTTTATAATATAAAGTGGGGG 59.554 37.037 25.08 15.21 37.00 5.40
802 803 3.120321 GGCAACCCTTTTTGGTAAAGG 57.880 47.619 8.91 8.91 44.90 3.11
803 804 2.436542 GGCAACCCTTTTTGGTAAAGGT 59.563 45.455 13.56 1.95 44.05 3.50
804 805 3.642377 GGCAACCCTTTTTGGTAAAGGTA 59.358 43.478 13.56 0.00 44.05 3.08
805 806 4.262292 GGCAACCCTTTTTGGTAAAGGTAG 60.262 45.833 13.56 4.03 44.05 3.18
806 807 4.585581 GCAACCCTTTTTGGTAAAGGTAGA 59.414 41.667 13.56 0.00 44.05 2.59
807 808 5.245301 GCAACCCTTTTTGGTAAAGGTAGAT 59.755 40.000 13.56 0.00 44.05 1.98
808 809 6.687604 CAACCCTTTTTGGTAAAGGTAGATG 58.312 40.000 13.56 3.19 44.05 2.90
809 810 4.770531 ACCCTTTTTGGTAAAGGTAGATGC 59.229 41.667 13.56 0.00 44.05 3.91
810 811 5.016831 CCCTTTTTGGTAAAGGTAGATGCT 58.983 41.667 13.56 0.00 44.05 3.79
811 812 5.125578 CCCTTTTTGGTAAAGGTAGATGCTC 59.874 44.000 13.56 0.00 44.05 4.26
812 813 5.946377 CCTTTTTGGTAAAGGTAGATGCTCT 59.054 40.000 7.90 0.00 41.38 4.09
813 814 7.110155 CCTTTTTGGTAAAGGTAGATGCTCTA 58.890 38.462 7.90 0.00 41.38 2.43
814 815 7.281100 CCTTTTTGGTAAAGGTAGATGCTCTAG 59.719 40.741 7.90 0.00 41.38 2.43
815 816 5.871396 TTGGTAAAGGTAGATGCTCTAGG 57.129 43.478 0.00 0.00 28.01 3.02
816 817 4.880164 TGGTAAAGGTAGATGCTCTAGGT 58.120 43.478 0.00 0.00 28.01 3.08
817 818 4.894114 TGGTAAAGGTAGATGCTCTAGGTC 59.106 45.833 0.00 0.00 28.01 3.85
818 819 5.141910 GGTAAAGGTAGATGCTCTAGGTCT 58.858 45.833 0.00 0.00 28.01 3.85
819 820 6.126273 TGGTAAAGGTAGATGCTCTAGGTCTA 60.126 42.308 0.00 0.00 28.01 2.59
820 821 6.207221 GGTAAAGGTAGATGCTCTAGGTCTAC 59.793 46.154 12.86 12.86 42.14 2.59
821 822 5.390087 AAGGTAGATGCTCTAGGTCTACA 57.610 43.478 18.42 2.40 43.76 2.74
822 823 4.980573 AGGTAGATGCTCTAGGTCTACAG 58.019 47.826 18.42 0.50 43.76 2.74
823 824 4.076394 GGTAGATGCTCTAGGTCTACAGG 58.924 52.174 18.42 0.00 43.76 4.00
824 825 3.963476 AGATGCTCTAGGTCTACAGGT 57.037 47.619 0.00 0.00 0.00 4.00
825 826 3.561143 AGATGCTCTAGGTCTACAGGTG 58.439 50.000 0.00 0.00 0.00 4.00
826 827 3.203263 AGATGCTCTAGGTCTACAGGTGA 59.797 47.826 0.00 0.00 0.00 4.02
827 828 2.724454 TGCTCTAGGTCTACAGGTGAC 58.276 52.381 0.00 0.00 0.00 3.67
828 829 1.671845 GCTCTAGGTCTACAGGTGACG 59.328 57.143 0.00 0.00 35.45 4.35
829 830 2.290464 CTCTAGGTCTACAGGTGACGG 58.710 57.143 0.00 0.00 35.45 4.79
830 831 0.739561 CTAGGTCTACAGGTGACGGC 59.260 60.000 0.00 0.00 35.45 5.68
831 832 0.330604 TAGGTCTACAGGTGACGGCT 59.669 55.000 0.00 0.00 35.45 5.52
832 833 1.215647 GGTCTACAGGTGACGGCTG 59.784 63.158 0.00 0.00 35.45 4.85
833 834 1.446272 GTCTACAGGTGACGGCTGC 60.446 63.158 0.00 0.00 0.00 5.25
834 835 1.606601 TCTACAGGTGACGGCTGCT 60.607 57.895 0.00 0.00 0.00 4.24
835 836 1.185618 TCTACAGGTGACGGCTGCTT 61.186 55.000 0.00 0.00 0.00 3.91
836 837 0.737715 CTACAGGTGACGGCTGCTTC 60.738 60.000 0.00 0.00 0.00 3.86
837 838 2.167398 TACAGGTGACGGCTGCTTCC 62.167 60.000 0.00 0.00 0.00 3.46
838 839 2.925170 AGGTGACGGCTGCTTCCT 60.925 61.111 0.00 0.00 0.00 3.36
839 840 2.032681 GGTGACGGCTGCTTCCTT 59.967 61.111 0.00 0.00 0.00 3.36
840 841 1.600916 GGTGACGGCTGCTTCCTTT 60.601 57.895 0.00 0.00 0.00 3.11
841 842 1.578206 GGTGACGGCTGCTTCCTTTC 61.578 60.000 0.00 0.00 0.00 2.62
842 843 0.884704 GTGACGGCTGCTTCCTTTCA 60.885 55.000 0.00 0.00 0.00 2.69
843 844 0.036732 TGACGGCTGCTTCCTTTCAT 59.963 50.000 0.00 0.00 0.00 2.57
844 845 1.277842 TGACGGCTGCTTCCTTTCATA 59.722 47.619 0.00 0.00 0.00 2.15
845 846 1.936547 GACGGCTGCTTCCTTTCATAG 59.063 52.381 0.00 0.00 0.00 2.23
946 947 4.475135 GCCTTCACCCGCTCCCTC 62.475 72.222 0.00 0.00 0.00 4.30
947 948 3.787001 CCTTCACCCGCTCCCTCC 61.787 72.222 0.00 0.00 0.00 4.30
948 949 3.787001 CTTCACCCGCTCCCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
949 950 4.332543 TTCACCCGCTCCCTCCCT 62.333 66.667 0.00 0.00 0.00 4.20
972 973 1.565067 CGAAACCCTACACCCCTAGT 58.435 55.000 0.00 0.00 0.00 2.57
1036 1094 4.854784 GCATCGACGCCGCTCTCA 62.855 66.667 0.00 0.00 35.37 3.27
1037 1095 2.202610 CATCGACGCCGCTCTCAA 60.203 61.111 0.00 0.00 35.37 3.02
1038 1096 2.103143 ATCGACGCCGCTCTCAAG 59.897 61.111 0.00 0.00 35.37 3.02
1039 1097 2.407428 ATCGACGCCGCTCTCAAGA 61.407 57.895 0.00 0.00 35.37 3.02
1040 1098 2.329678 ATCGACGCCGCTCTCAAGAG 62.330 60.000 2.53 2.53 44.75 2.85
1041 1099 2.569134 GACGCCGCTCTCAAGAGT 59.431 61.111 8.73 0.00 43.85 3.24
1042 1100 1.801332 GACGCCGCTCTCAAGAGTA 59.199 57.895 8.73 0.00 43.85 2.59
1043 1101 0.170561 GACGCCGCTCTCAAGAGTAA 59.829 55.000 8.73 0.00 43.85 2.24
1044 1102 0.171455 ACGCCGCTCTCAAGAGTAAG 59.829 55.000 8.73 1.65 43.85 2.34
1045 1103 0.452184 CGCCGCTCTCAAGAGTAAGA 59.548 55.000 8.73 0.00 43.85 2.10
1046 1104 1.532921 CGCCGCTCTCAAGAGTAAGAG 60.533 57.143 8.73 0.00 43.85 2.85
1051 1109 3.518634 CTCTCAAGAGTAAGAGCCACC 57.481 52.381 0.00 0.00 37.40 4.61
1052 1110 2.167487 CTCTCAAGAGTAAGAGCCACCC 59.833 54.545 0.00 0.00 37.40 4.61
1053 1111 1.208293 CTCAAGAGTAAGAGCCACCCC 59.792 57.143 0.00 0.00 0.00 4.95
1054 1112 0.253327 CAAGAGTAAGAGCCACCCCC 59.747 60.000 0.00 0.00 0.00 5.40
1083 1141 3.003173 CCCCCTCTCTGCCGTTGA 61.003 66.667 0.00 0.00 0.00 3.18
1084 1142 2.370445 CCCCCTCTCTGCCGTTGAT 61.370 63.158 0.00 0.00 0.00 2.57
1085 1143 1.153289 CCCCTCTCTGCCGTTGATG 60.153 63.158 0.00 0.00 0.00 3.07
1086 1144 1.153289 CCCTCTCTGCCGTTGATGG 60.153 63.158 0.00 0.00 0.00 3.51
1087 1145 1.617018 CCCTCTCTGCCGTTGATGGA 61.617 60.000 0.00 0.00 0.00 3.41
1088 1146 0.250234 CCTCTCTGCCGTTGATGGAA 59.750 55.000 0.00 0.00 0.00 3.53
1089 1147 1.134280 CCTCTCTGCCGTTGATGGAAT 60.134 52.381 0.00 0.00 0.00 3.01
1090 1148 1.938577 CTCTCTGCCGTTGATGGAATG 59.061 52.381 0.00 0.00 0.00 2.67
1091 1149 0.379669 CTCTGCCGTTGATGGAATGC 59.620 55.000 0.00 0.00 0.00 3.56
1092 1150 1.031571 TCTGCCGTTGATGGAATGCC 61.032 55.000 0.00 0.00 0.00 4.40
1093 1151 2.327002 CTGCCGTTGATGGAATGCCG 62.327 60.000 0.00 0.00 36.79 5.69
1101 1159 3.057969 TGATGGAATGCCGTATGATCC 57.942 47.619 0.00 0.00 36.79 3.36
1151 1473 2.956194 TGCTTGTGCATTGCGGAG 59.044 55.556 3.84 3.03 45.31 4.63
1170 1492 1.676968 GAATTTGGGGTTGGGTGGC 59.323 57.895 0.00 0.00 0.00 5.01
1171 1493 1.836999 GAATTTGGGGTTGGGTGGCC 61.837 60.000 0.00 0.00 0.00 5.36
1172 1494 3.863114 ATTTGGGGTTGGGTGGCCC 62.863 63.158 0.00 0.00 45.71 5.80
1197 1519 1.272781 CGAACTTCAGATCCGCACTC 58.727 55.000 0.00 0.00 0.00 3.51
1299 1629 2.202492 CGAGACTTCGTGGCCTCG 60.202 66.667 20.92 20.92 41.84 4.63
1301 1631 3.282745 GAGACTTCGTGGCCTCGCA 62.283 63.158 22.04 11.01 0.00 5.10
1318 1648 0.099436 GCATCACGAAATCAGTGGGC 59.901 55.000 0.00 0.00 39.86 5.36
1336 1666 3.508840 GCGAGTGGCCCGATTTGG 61.509 66.667 0.00 0.00 34.80 3.28
1369 1699 6.211515 GTCTGTGCAAGTTTCATCTTGAATT 58.788 36.000 10.07 0.00 45.11 2.17
1370 1700 7.362662 GTCTGTGCAAGTTTCATCTTGAATTA 58.637 34.615 10.07 0.00 45.11 1.40
1371 1701 7.862372 GTCTGTGCAAGTTTCATCTTGAATTAA 59.138 33.333 10.07 0.00 45.11 1.40
1372 1702 8.579006 TCTGTGCAAGTTTCATCTTGAATTAAT 58.421 29.630 10.07 0.00 45.11 1.40
1435 1765 2.552315 TCAGTTTGTTCCTGCGATTTCC 59.448 45.455 0.00 0.00 0.00 3.13
1438 1768 0.958382 TTGTTCCTGCGATTTCCCCG 60.958 55.000 0.00 0.00 0.00 5.73
1451 1781 3.323751 TTTCCCCGTTGCTAGAACTAC 57.676 47.619 0.00 0.00 0.00 2.73
1673 2010 6.821031 TCTTCTCCTTCTGTTACTACTGAC 57.179 41.667 0.00 0.00 32.72 3.51
1926 2445 9.401058 GTCTACTGTATATATATACACCCCGTT 57.599 37.037 25.25 11.85 42.47 4.44
1959 2478 5.128205 TGGCTTAGGTTCTGATCATTGATG 58.872 41.667 3.32 0.00 0.00 3.07
1987 2506 5.649557 TGGATATGTACTGCATTTTGTTGC 58.350 37.500 0.00 0.00 43.07 4.17
2291 2811 6.294176 GGTGGCATGTTAACAATATCCATCTC 60.294 42.308 13.23 6.02 0.00 2.75
2375 2895 8.150296 TCACGTATTTTCATACCTCATGATGAT 58.850 33.333 4.88 0.00 43.26 2.45
2436 2956 5.344743 TTGAGGTCCAATAGCTTACTGAG 57.655 43.478 0.00 0.00 35.60 3.35
2448 2968 5.557891 AGCTTACTGAGTTGATGCATTTC 57.442 39.130 0.00 0.00 0.00 2.17
2687 3210 2.749044 AGGCTGTTGCTGATGGCG 60.749 61.111 0.00 0.00 45.43 5.69
2766 3289 2.266055 GGCTCTGTTCGTCCCTGG 59.734 66.667 0.00 0.00 0.00 4.45
2837 3364 1.400846 GCATGTCTGATGCTGAGTTGG 59.599 52.381 0.00 0.00 41.52 3.77
2987 3516 2.432510 GACCTAGTCAGACATCCCAAGG 59.567 54.545 2.66 2.46 32.09 3.61
3097 3626 5.426504 ACAGCTTTTACATCTCATCTGAGG 58.573 41.667 7.33 0.00 42.30 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.148279 CGGGGAGGGAGGAAGACG 61.148 72.222 0.00 0.00 0.00 4.18
1 2 2.764547 CCGGGGAGGGAGGAAGAC 60.765 72.222 0.00 0.00 35.97 3.01
2 3 4.798682 GCCGGGGAGGGAGGAAGA 62.799 72.222 2.18 0.00 41.48 2.87
4 5 4.431524 ATGCCGGGGAGGGAGGAA 62.432 66.667 2.18 0.00 46.12 3.36
5 6 4.880426 GATGCCGGGGAGGGAGGA 62.880 72.222 2.18 0.00 46.12 3.71
6 7 4.888325 AGATGCCGGGGAGGGAGG 62.888 72.222 2.18 0.00 46.12 4.30
7 8 3.237741 GAGATGCCGGGGAGGGAG 61.238 72.222 2.18 0.00 46.12 4.30
9 10 4.888325 AGGAGATGCCGGGGAGGG 62.888 72.222 2.18 0.00 43.43 4.30
10 11 3.237741 GAGGAGATGCCGGGGAGG 61.238 72.222 2.18 0.00 43.43 4.30
11 12 3.237741 GGAGGAGATGCCGGGGAG 61.238 72.222 2.18 0.00 43.43 4.30
12 13 3.758133 GAGGAGGAGATGCCGGGGA 62.758 68.421 2.18 0.00 43.43 4.81
13 14 3.237741 GAGGAGGAGATGCCGGGG 61.238 72.222 2.18 0.00 43.43 5.73
14 15 2.066393 TTGAGGAGGAGATGCCGGG 61.066 63.158 2.18 0.00 43.43 5.73
15 16 1.144936 GTTGAGGAGGAGATGCCGG 59.855 63.158 0.00 0.00 43.43 6.13
16 17 1.144936 GGTTGAGGAGGAGATGCCG 59.855 63.158 0.00 0.00 43.43 5.69
17 18 0.467804 GAGGTTGAGGAGGAGATGCC 59.532 60.000 0.00 0.00 0.00 4.40
18 19 0.467804 GGAGGTTGAGGAGGAGATGC 59.532 60.000 0.00 0.00 0.00 3.91
19 20 2.038659 GAGGAGGTTGAGGAGGAGATG 58.961 57.143 0.00 0.00 0.00 2.90
20 21 1.410932 CGAGGAGGTTGAGGAGGAGAT 60.411 57.143 0.00 0.00 0.00 2.75
21 22 0.033991 CGAGGAGGTTGAGGAGGAGA 60.034 60.000 0.00 0.00 0.00 3.71
22 23 0.033991 TCGAGGAGGTTGAGGAGGAG 60.034 60.000 0.00 0.00 0.00 3.69
23 24 0.408309 TTCGAGGAGGTTGAGGAGGA 59.592 55.000 0.00 0.00 0.00 3.71
24 25 1.267121 TTTCGAGGAGGTTGAGGAGG 58.733 55.000 0.00 0.00 0.00 4.30
25 26 3.526534 GATTTTCGAGGAGGTTGAGGAG 58.473 50.000 0.00 0.00 0.00 3.69
26 27 2.236395 GGATTTTCGAGGAGGTTGAGGA 59.764 50.000 0.00 0.00 0.00 3.71
27 28 2.237392 AGGATTTTCGAGGAGGTTGAGG 59.763 50.000 0.00 0.00 0.00 3.86
28 29 3.526534 GAGGATTTTCGAGGAGGTTGAG 58.473 50.000 0.00 0.00 0.00 3.02
29 30 2.236395 GGAGGATTTTCGAGGAGGTTGA 59.764 50.000 0.00 0.00 0.00 3.18
30 31 2.237392 AGGAGGATTTTCGAGGAGGTTG 59.763 50.000 0.00 0.00 0.00 3.77
31 32 2.502130 GAGGAGGATTTTCGAGGAGGTT 59.498 50.000 0.00 0.00 0.00 3.50
32 33 2.112190 GAGGAGGATTTTCGAGGAGGT 58.888 52.381 0.00 0.00 0.00 3.85
33 34 1.414550 GGAGGAGGATTTTCGAGGAGG 59.585 57.143 0.00 0.00 0.00 4.30
34 35 1.067821 CGGAGGAGGATTTTCGAGGAG 59.932 57.143 0.00 0.00 0.00 3.69
35 36 1.112113 CGGAGGAGGATTTTCGAGGA 58.888 55.000 0.00 0.00 0.00 3.71
36 37 3.669354 CGGAGGAGGATTTTCGAGG 57.331 57.895 0.00 0.00 0.00 4.63
49 50 5.549066 GAGGCTACCTTTGTAACCGGAGG 62.549 56.522 9.46 5.60 45.92 4.30
50 51 1.553704 AGGCTACCTTTGTAACCGGAG 59.446 52.381 9.46 0.00 38.09 4.63
51 52 1.551883 GAGGCTACCTTTGTAACCGGA 59.448 52.381 9.46 0.00 38.09 5.14
52 53 1.738030 CGAGGCTACCTTTGTAACCGG 60.738 57.143 0.00 0.00 38.09 5.28
53 54 1.636988 CGAGGCTACCTTTGTAACCG 58.363 55.000 0.00 0.00 38.09 4.44
54 55 1.066358 AGCGAGGCTACCTTTGTAACC 60.066 52.381 0.00 0.00 36.99 2.85
55 56 2.381725 AGCGAGGCTACCTTTGTAAC 57.618 50.000 0.00 0.00 36.99 2.50
56 57 2.354403 GGAAGCGAGGCTACCTTTGTAA 60.354 50.000 0.00 0.00 38.25 2.41
57 58 1.206371 GGAAGCGAGGCTACCTTTGTA 59.794 52.381 0.00 0.00 38.25 2.41
58 59 0.036294 GGAAGCGAGGCTACCTTTGT 60.036 55.000 0.00 0.00 38.25 2.83
59 60 0.744771 GGGAAGCGAGGCTACCTTTG 60.745 60.000 0.00 0.00 38.25 2.77
60 61 0.910088 AGGGAAGCGAGGCTACCTTT 60.910 55.000 7.67 0.00 41.28 3.11
61 62 0.032416 TAGGGAAGCGAGGCTACCTT 60.032 55.000 15.87 0.00 41.28 3.50
62 63 0.188834 ATAGGGAAGCGAGGCTACCT 59.811 55.000 15.24 15.24 44.44 3.08
63 64 0.318762 CATAGGGAAGCGAGGCTACC 59.681 60.000 0.00 3.80 38.25 3.18
64 65 0.318762 CCATAGGGAAGCGAGGCTAC 59.681 60.000 0.00 0.00 38.25 3.58
65 66 0.187606 TCCATAGGGAAGCGAGGCTA 59.812 55.000 0.00 0.00 41.32 3.93
66 67 1.075226 TCCATAGGGAAGCGAGGCT 60.075 57.895 0.00 0.00 41.32 4.58
67 68 3.550974 TCCATAGGGAAGCGAGGC 58.449 61.111 0.00 0.00 41.32 4.70
76 77 1.831652 GCAGGTCCGGATCCATAGGG 61.832 65.000 12.23 4.69 0.00 3.53
77 78 0.833834 AGCAGGTCCGGATCCATAGG 60.834 60.000 12.23 5.09 0.00 2.57
78 79 0.605589 GAGCAGGTCCGGATCCATAG 59.394 60.000 12.23 8.18 0.00 2.23
79 80 0.105709 TGAGCAGGTCCGGATCCATA 60.106 55.000 12.23 0.00 0.00 2.74
80 81 0.982852 TTGAGCAGGTCCGGATCCAT 60.983 55.000 12.23 0.00 0.00 3.41
81 82 1.612146 TTGAGCAGGTCCGGATCCA 60.612 57.895 12.23 0.00 0.00 3.41
82 83 1.144936 CTTGAGCAGGTCCGGATCC 59.855 63.158 12.23 12.95 0.00 3.36
83 84 1.144936 CCTTGAGCAGGTCCGGATC 59.855 63.158 7.81 7.19 37.99 3.36
84 85 1.306141 TCCTTGAGCAGGTCCGGAT 60.306 57.895 7.81 0.00 44.37 4.18
85 86 1.984570 CTCCTTGAGCAGGTCCGGA 60.985 63.158 0.00 0.00 44.37 5.14
86 87 2.581354 CTCCTTGAGCAGGTCCGG 59.419 66.667 0.00 0.00 44.37 5.14
87 88 1.544825 TTCCTCCTTGAGCAGGTCCG 61.545 60.000 0.00 0.00 44.37 4.79
88 89 0.251634 CTTCCTCCTTGAGCAGGTCC 59.748 60.000 0.00 0.00 44.37 4.46
89 90 1.206849 CTCTTCCTCCTTGAGCAGGTC 59.793 57.143 0.00 0.00 44.37 3.85
90 91 1.203237 TCTCTTCCTCCTTGAGCAGGT 60.203 52.381 0.00 0.00 44.37 4.00
91 92 1.566211 TCTCTTCCTCCTTGAGCAGG 58.434 55.000 0.00 0.00 45.64 4.85
92 93 2.158928 CCATCTCTTCCTCCTTGAGCAG 60.159 54.545 0.00 0.00 0.00 4.24
93 94 1.836166 CCATCTCTTCCTCCTTGAGCA 59.164 52.381 0.00 0.00 0.00 4.26
94 95 1.836802 ACCATCTCTTCCTCCTTGAGC 59.163 52.381 0.00 0.00 0.00 4.26
95 96 2.419851 GCACCATCTCTTCCTCCTTGAG 60.420 54.545 0.00 0.00 0.00 3.02
96 97 1.556911 GCACCATCTCTTCCTCCTTGA 59.443 52.381 0.00 0.00 0.00 3.02
97 98 1.558756 AGCACCATCTCTTCCTCCTTG 59.441 52.381 0.00 0.00 0.00 3.61
98 99 1.558756 CAGCACCATCTCTTCCTCCTT 59.441 52.381 0.00 0.00 0.00 3.36
99 100 1.202330 CAGCACCATCTCTTCCTCCT 58.798 55.000 0.00 0.00 0.00 3.69
100 101 0.179936 CCAGCACCATCTCTTCCTCC 59.820 60.000 0.00 0.00 0.00 4.30
101 102 1.198713 TCCAGCACCATCTCTTCCTC 58.801 55.000 0.00 0.00 0.00 3.71
102 103 1.767681 GATCCAGCACCATCTCTTCCT 59.232 52.381 0.00 0.00 0.00 3.36
103 104 1.539929 CGATCCAGCACCATCTCTTCC 60.540 57.143 0.00 0.00 0.00 3.46
104 105 1.137872 ACGATCCAGCACCATCTCTTC 59.862 52.381 0.00 0.00 0.00 2.87
105 106 1.134580 CACGATCCAGCACCATCTCTT 60.135 52.381 0.00 0.00 0.00 2.85
106 107 0.463204 CACGATCCAGCACCATCTCT 59.537 55.000 0.00 0.00 0.00 3.10
107 108 0.176680 ACACGATCCAGCACCATCTC 59.823 55.000 0.00 0.00 0.00 2.75
108 109 1.137086 GTACACGATCCAGCACCATCT 59.863 52.381 0.00 0.00 0.00 2.90
109 110 1.137086 AGTACACGATCCAGCACCATC 59.863 52.381 0.00 0.00 0.00 3.51
110 111 1.195115 AGTACACGATCCAGCACCAT 58.805 50.000 0.00 0.00 0.00 3.55
111 112 1.749063 CTAGTACACGATCCAGCACCA 59.251 52.381 0.00 0.00 0.00 4.17
112 113 1.536284 GCTAGTACACGATCCAGCACC 60.536 57.143 0.00 0.00 0.00 5.01
113 114 1.841450 GCTAGTACACGATCCAGCAC 58.159 55.000 0.00 0.00 0.00 4.40
114 115 0.380733 CGCTAGTACACGATCCAGCA 59.619 55.000 0.00 0.00 0.00 4.41
115 116 0.317938 CCGCTAGTACACGATCCAGC 60.318 60.000 0.00 0.00 0.00 4.85
116 117 0.317938 GCCGCTAGTACACGATCCAG 60.318 60.000 0.00 0.00 0.00 3.86
117 118 1.731700 GCCGCTAGTACACGATCCA 59.268 57.895 0.00 0.00 0.00 3.41
118 119 1.370172 CGCCGCTAGTACACGATCC 60.370 63.158 0.00 0.00 0.00 3.36
119 120 1.370172 CCGCCGCTAGTACACGATC 60.370 63.158 0.00 0.00 0.00 3.69
120 121 2.719979 CCGCCGCTAGTACACGAT 59.280 61.111 0.00 0.00 0.00 3.73
121 122 4.183686 GCCGCCGCTAGTACACGA 62.184 66.667 0.00 0.00 0.00 4.35
123 124 4.487412 ACGCCGCCGCTAGTACAC 62.487 66.667 0.00 0.00 38.22 2.90
124 125 4.485834 CACGCCGCCGCTAGTACA 62.486 66.667 0.00 0.00 38.22 2.90
136 137 3.697439 TTAGCCATGCCTCCACGCC 62.697 63.158 0.00 0.00 0.00 5.68
137 138 2.124736 TTAGCCATGCCTCCACGC 60.125 61.111 0.00 0.00 0.00 5.34
138 139 1.078497 TGTTAGCCATGCCTCCACG 60.078 57.895 0.00 0.00 0.00 4.94
139 140 0.749454 CCTGTTAGCCATGCCTCCAC 60.749 60.000 0.00 0.00 0.00 4.02
140 141 1.609239 CCTGTTAGCCATGCCTCCA 59.391 57.895 0.00 0.00 0.00 3.86
141 142 1.825622 GCCTGTTAGCCATGCCTCC 60.826 63.158 0.00 0.00 0.00 4.30
142 143 0.817229 GAGCCTGTTAGCCATGCCTC 60.817 60.000 0.00 0.00 35.50 4.70
143 144 1.225704 GAGCCTGTTAGCCATGCCT 59.774 57.895 0.00 0.00 35.50 4.75
144 145 2.182842 CGAGCCTGTTAGCCATGCC 61.183 63.158 0.00 0.00 35.50 4.40
145 146 1.153369 TCGAGCCTGTTAGCCATGC 60.153 57.895 0.00 0.00 35.17 4.06
146 147 0.176680 ACTCGAGCCTGTTAGCCATG 59.823 55.000 13.61 0.00 0.00 3.66
147 148 0.176680 CACTCGAGCCTGTTAGCCAT 59.823 55.000 13.61 0.00 0.00 4.40
148 149 1.591703 CACTCGAGCCTGTTAGCCA 59.408 57.895 13.61 0.00 0.00 4.75
149 150 1.153549 CCACTCGAGCCTGTTAGCC 60.154 63.158 13.61 0.00 0.00 3.93
150 151 1.811679 GCCACTCGAGCCTGTTAGC 60.812 63.158 13.61 1.22 0.00 3.09
151 152 1.517257 CGCCACTCGAGCCTGTTAG 60.517 63.158 13.61 0.00 41.67 2.34
152 153 2.571757 CGCCACTCGAGCCTGTTA 59.428 61.111 13.61 0.00 41.67 2.41
153 154 4.379243 CCGCCACTCGAGCCTGTT 62.379 66.667 13.61 0.00 41.67 3.16
162 163 4.821589 CTCCCTTCGCCGCCACTC 62.822 72.222 0.00 0.00 0.00 3.51
166 167 4.404098 TTTCCTCCCTTCGCCGCC 62.404 66.667 0.00 0.00 0.00 6.13
167 168 2.820037 CTTTCCTCCCTTCGCCGC 60.820 66.667 0.00 0.00 0.00 6.53
168 169 1.153549 CTCTTTCCTCCCTTCGCCG 60.154 63.158 0.00 0.00 0.00 6.46
169 170 1.222113 CCTCTTTCCTCCCTTCGCC 59.778 63.158 0.00 0.00 0.00 5.54
170 171 1.450491 GCCTCTTTCCTCCCTTCGC 60.450 63.158 0.00 0.00 0.00 4.70
171 172 1.153549 CGCCTCTTTCCTCCCTTCG 60.154 63.158 0.00 0.00 0.00 3.79
172 173 1.222113 CCGCCTCTTTCCTCCCTTC 59.778 63.158 0.00 0.00 0.00 3.46
173 174 0.621862 ATCCGCCTCTTTCCTCCCTT 60.622 55.000 0.00 0.00 0.00 3.95
174 175 1.003573 ATCCGCCTCTTTCCTCCCT 59.996 57.895 0.00 0.00 0.00 4.20
175 176 1.147153 CATCCGCCTCTTTCCTCCC 59.853 63.158 0.00 0.00 0.00 4.30
176 177 0.462759 CACATCCGCCTCTTTCCTCC 60.463 60.000 0.00 0.00 0.00 4.30
177 178 1.092345 GCACATCCGCCTCTTTCCTC 61.092 60.000 0.00 0.00 0.00 3.71
178 179 1.078143 GCACATCCGCCTCTTTCCT 60.078 57.895 0.00 0.00 0.00 3.36
179 180 0.178068 TAGCACATCCGCCTCTTTCC 59.822 55.000 0.00 0.00 0.00 3.13
180 181 1.576356 CTAGCACATCCGCCTCTTTC 58.424 55.000 0.00 0.00 0.00 2.62
181 182 0.179000 CCTAGCACATCCGCCTCTTT 59.821 55.000 0.00 0.00 0.00 2.52
182 183 1.690219 CCCTAGCACATCCGCCTCTT 61.690 60.000 0.00 0.00 0.00 2.85
183 184 2.136878 CCCTAGCACATCCGCCTCT 61.137 63.158 0.00 0.00 0.00 3.69
184 185 2.423446 CCCTAGCACATCCGCCTC 59.577 66.667 0.00 0.00 0.00 4.70
185 186 3.866582 GCCCTAGCACATCCGCCT 61.867 66.667 0.00 0.00 39.53 5.52
186 187 3.866582 AGCCCTAGCACATCCGCC 61.867 66.667 0.00 0.00 43.56 6.13
187 188 2.590007 CAGCCCTAGCACATCCGC 60.590 66.667 0.00 0.00 43.56 5.54
188 189 2.109799 CCAGCCCTAGCACATCCG 59.890 66.667 0.00 0.00 43.56 4.18
189 190 2.512896 CCCAGCCCTAGCACATCC 59.487 66.667 0.00 0.00 43.56 3.51
190 191 2.512896 CCCCAGCCCTAGCACATC 59.487 66.667 0.00 0.00 43.56 3.06
191 192 3.099170 CCCCCAGCCCTAGCACAT 61.099 66.667 0.00 0.00 43.56 3.21
208 209 1.828331 CTATTTAAGCCGGCCGACGC 61.828 60.000 30.73 23.25 42.52 5.19
209 210 1.828331 GCTATTTAAGCCGGCCGACG 61.828 60.000 30.73 12.70 46.25 5.12
210 211 1.939597 GCTATTTAAGCCGGCCGAC 59.060 57.895 30.73 17.62 46.25 4.79
211 212 4.449391 GCTATTTAAGCCGGCCGA 57.551 55.556 30.73 8.66 46.25 5.54
280 281 3.757248 ATGATCCAACGGGCGCCTC 62.757 63.158 28.56 14.76 0.00 4.70
281 282 3.757248 GATGATCCAACGGGCGCCT 62.757 63.158 28.56 3.74 0.00 5.52
282 283 3.279875 GATGATCCAACGGGCGCC 61.280 66.667 21.18 21.18 0.00 6.53
283 284 3.640000 CGATGATCCAACGGGCGC 61.640 66.667 0.00 0.00 0.00 6.53
284 285 2.967076 CCGATGATCCAACGGGCG 60.967 66.667 12.41 0.00 44.19 6.13
287 288 1.400494 GAAAACCCGATGATCCAACGG 59.600 52.381 13.04 13.04 46.77 4.44
288 289 1.400494 GGAAAACCCGATGATCCAACG 59.600 52.381 0.00 0.00 0.00 4.10
300 301 0.177373 ATAGACTCGCCGGAAAACCC 59.823 55.000 5.05 0.00 0.00 4.11
301 302 1.287425 CATAGACTCGCCGGAAAACC 58.713 55.000 5.05 0.00 0.00 3.27
302 303 1.659098 CACATAGACTCGCCGGAAAAC 59.341 52.381 5.05 0.00 0.00 2.43
303 304 1.404986 CCACATAGACTCGCCGGAAAA 60.405 52.381 5.05 0.00 0.00 2.29
304 305 0.174845 CCACATAGACTCGCCGGAAA 59.825 55.000 5.05 0.00 0.00 3.13
305 306 1.672854 CCCACATAGACTCGCCGGAA 61.673 60.000 5.05 0.00 0.00 4.30
306 307 2.125326 CCCACATAGACTCGCCGGA 61.125 63.158 5.05 0.00 0.00 5.14
307 308 2.417516 CCCACATAGACTCGCCGG 59.582 66.667 0.00 0.00 0.00 6.13
308 309 2.417516 CCCCACATAGACTCGCCG 59.582 66.667 0.00 0.00 0.00 6.46
309 310 2.109181 GCCCCACATAGACTCGCC 59.891 66.667 0.00 0.00 0.00 5.54
310 311 2.109181 GGCCCCACATAGACTCGC 59.891 66.667 0.00 0.00 0.00 5.03
311 312 1.144057 GTGGCCCCACATAGACTCG 59.856 63.158 12.42 0.00 45.53 4.18
312 313 1.144057 CGTGGCCCCACATAGACTC 59.856 63.158 16.94 0.00 46.47 3.36
313 314 1.612442 ACGTGGCCCCACATAGACT 60.612 57.895 16.94 0.00 46.47 3.24
314 315 1.153429 GACGTGGCCCCACATAGAC 60.153 63.158 16.94 0.00 46.47 2.59
315 316 2.717044 CGACGTGGCCCCACATAGA 61.717 63.158 16.94 0.00 46.47 1.98
316 317 2.202878 CGACGTGGCCCCACATAG 60.203 66.667 16.94 0.00 46.47 2.23
317 318 2.998480 ACGACGTGGCCCCACATA 60.998 61.111 16.94 0.00 46.47 2.29
318 319 4.388499 GACGACGTGGCCCCACAT 62.388 66.667 16.94 1.54 46.47 3.21
326 327 2.071844 ATATCGGCCTGACGACGTGG 62.072 60.000 4.58 1.89 46.64 4.94
327 328 0.660595 GATATCGGCCTGACGACGTG 60.661 60.000 4.58 0.00 46.64 4.49
328 329 1.653115 GATATCGGCCTGACGACGT 59.347 57.895 0.00 0.00 46.64 4.34
329 330 1.081376 GGATATCGGCCTGACGACG 60.081 63.158 0.00 0.00 46.64 5.12
330 331 1.081376 CGGATATCGGCCTGACGAC 60.081 63.158 0.00 0.00 46.64 4.34
332 333 2.430921 GCGGATATCGGCCTGACG 60.431 66.667 21.31 7.35 39.69 4.35
339 340 3.198068 CTCAAATATGGGCGGATATCGG 58.802 50.000 5.93 5.93 39.69 4.18
340 341 2.609459 GCTCAAATATGGGCGGATATCG 59.391 50.000 0.00 0.00 44.59 2.92
350 351 3.424703 CCCATACCCAGCTCAAATATGG 58.575 50.000 12.80 12.80 41.29 2.74
351 352 3.424703 CCCCATACCCAGCTCAAATATG 58.575 50.000 0.00 0.00 0.00 1.78
352 353 2.379907 CCCCCATACCCAGCTCAAATAT 59.620 50.000 0.00 0.00 0.00 1.28
353 354 1.780309 CCCCCATACCCAGCTCAAATA 59.220 52.381 0.00 0.00 0.00 1.40
354 355 0.557729 CCCCCATACCCAGCTCAAAT 59.442 55.000 0.00 0.00 0.00 2.32
355 356 2.006748 CCCCCATACCCAGCTCAAA 58.993 57.895 0.00 0.00 0.00 2.69
356 357 3.754043 CCCCCATACCCAGCTCAA 58.246 61.111 0.00 0.00 0.00 3.02
379 380 1.006571 TCAAACGCTCGGACTGACC 60.007 57.895 0.00 0.00 0.00 4.02
380 381 1.009389 CCTCAAACGCTCGGACTGAC 61.009 60.000 0.00 0.00 0.00 3.51
381 382 1.289066 CCTCAAACGCTCGGACTGA 59.711 57.895 0.00 0.00 0.00 3.41
382 383 1.738099 CCCTCAAACGCTCGGACTG 60.738 63.158 0.00 0.00 0.00 3.51
383 384 2.657237 CCCTCAAACGCTCGGACT 59.343 61.111 0.00 0.00 0.00 3.85
384 385 3.119096 GCCCTCAAACGCTCGGAC 61.119 66.667 0.00 0.00 0.00 4.79
385 386 4.388499 GGCCCTCAAACGCTCGGA 62.388 66.667 0.00 0.00 0.00 4.55
386 387 3.976701 ATGGCCCTCAAACGCTCGG 62.977 63.158 0.00 0.00 0.00 4.63
387 388 1.586154 AAATGGCCCTCAAACGCTCG 61.586 55.000 0.00 0.00 0.00 5.03
388 389 0.109132 CAAATGGCCCTCAAACGCTC 60.109 55.000 0.00 0.00 0.00 5.03
389 390 0.539438 TCAAATGGCCCTCAAACGCT 60.539 50.000 0.00 0.00 0.00 5.07
390 391 0.388520 GTCAAATGGCCCTCAAACGC 60.389 55.000 0.00 0.00 0.00 4.84
391 392 0.958091 TGTCAAATGGCCCTCAAACG 59.042 50.000 0.00 0.00 0.00 3.60
392 393 1.273327 CCTGTCAAATGGCCCTCAAAC 59.727 52.381 0.00 0.00 0.00 2.93
393 394 1.133199 ACCTGTCAAATGGCCCTCAAA 60.133 47.619 0.00 0.00 0.00 2.69
394 395 0.482446 ACCTGTCAAATGGCCCTCAA 59.518 50.000 0.00 0.00 0.00 3.02
395 396 0.038166 GACCTGTCAAATGGCCCTCA 59.962 55.000 0.00 0.00 0.00 3.86
396 397 0.681243 GGACCTGTCAAATGGCCCTC 60.681 60.000 0.00 0.00 0.00 4.30
397 398 1.384191 GGACCTGTCAAATGGCCCT 59.616 57.895 0.00 0.00 0.00 5.19
398 399 0.324645 ATGGACCTGTCAAATGGCCC 60.325 55.000 0.00 0.00 0.00 5.80
399 400 1.560505 AATGGACCTGTCAAATGGCC 58.439 50.000 0.00 0.00 0.00 5.36
400 401 2.354003 CCAAATGGACCTGTCAAATGGC 60.354 50.000 0.00 0.00 37.39 4.40
401 402 2.234414 CCCAAATGGACCTGTCAAATGG 59.766 50.000 0.00 1.91 37.39 3.16
402 403 2.899256 ACCCAAATGGACCTGTCAAATG 59.101 45.455 0.00 0.00 37.39 2.32
403 404 3.165071 GACCCAAATGGACCTGTCAAAT 58.835 45.455 0.00 0.00 37.39 2.32
404 405 2.091610 TGACCCAAATGGACCTGTCAAA 60.092 45.455 0.00 0.00 37.39 2.69
405 406 1.496857 TGACCCAAATGGACCTGTCAA 59.503 47.619 0.00 0.00 37.39 3.18
406 407 1.144691 TGACCCAAATGGACCTGTCA 58.855 50.000 0.00 3.25 37.39 3.58
407 408 2.286365 TTGACCCAAATGGACCTGTC 57.714 50.000 0.00 0.55 37.39 3.51
408 409 2.765689 TTTGACCCAAATGGACCTGT 57.234 45.000 0.00 0.00 37.39 4.00
409 410 4.568956 GATTTTTGACCCAAATGGACCTG 58.431 43.478 0.00 0.00 37.39 4.00
410 411 3.258123 CGATTTTTGACCCAAATGGACCT 59.742 43.478 0.00 0.00 37.39 3.85
411 412 3.006430 ACGATTTTTGACCCAAATGGACC 59.994 43.478 0.00 0.00 37.39 4.46
412 413 3.987220 CACGATTTTTGACCCAAATGGAC 59.013 43.478 0.00 0.00 37.39 4.02
413 414 3.891977 TCACGATTTTTGACCCAAATGGA 59.108 39.130 0.00 0.00 37.39 3.41
414 415 3.987220 GTCACGATTTTTGACCCAAATGG 59.013 43.478 0.00 0.00 37.93 3.16
422 423 0.109919 GGCCGGTCACGATTTTTGAC 60.110 55.000 0.00 0.00 44.60 3.18
423 424 1.238625 GGGCCGGTCACGATTTTTGA 61.239 55.000 9.07 0.00 44.60 2.69
424 425 1.211709 GGGCCGGTCACGATTTTTG 59.788 57.895 9.07 0.00 44.60 2.44
425 426 2.329614 CGGGCCGGTCACGATTTTT 61.330 57.895 20.56 0.00 44.60 1.94
426 427 2.744709 CGGGCCGGTCACGATTTT 60.745 61.111 20.56 0.00 44.60 1.82
427 428 3.697747 TCGGGCCGGTCACGATTT 61.698 61.111 27.98 0.00 44.60 2.17
428 429 4.446413 GTCGGGCCGGTCACGATT 62.446 66.667 27.98 0.00 44.60 3.34
438 439 4.580551 CATACGTCCGGTCGGGCC 62.581 72.222 24.38 0.00 36.31 5.80
439 440 3.480225 CTCATACGTCCGGTCGGGC 62.480 68.421 24.38 6.76 36.34 6.13
440 441 1.820906 TCTCATACGTCCGGTCGGG 60.821 63.158 24.38 13.53 35.59 5.14
441 442 1.354506 GTCTCATACGTCCGGTCGG 59.645 63.158 24.38 7.70 34.94 4.79
442 443 1.011463 CGTCTCATACGTCCGGTCG 60.011 63.158 19.57 19.57 46.72 4.79
443 444 4.991760 CGTCTCATACGTCCGGTC 57.008 61.111 0.00 0.00 46.72 4.79
451 452 2.941064 GCCCTTTAAACCCGTCTCATAC 59.059 50.000 0.00 0.00 0.00 2.39
452 453 2.419021 CGCCCTTTAAACCCGTCTCATA 60.419 50.000 0.00 0.00 0.00 2.15
453 454 1.677820 CGCCCTTTAAACCCGTCTCAT 60.678 52.381 0.00 0.00 0.00 2.90
454 455 0.320946 CGCCCTTTAAACCCGTCTCA 60.321 55.000 0.00 0.00 0.00 3.27
455 456 0.321034 ACGCCCTTTAAACCCGTCTC 60.321 55.000 0.00 0.00 0.00 3.36
456 457 0.321034 GACGCCCTTTAAACCCGTCT 60.321 55.000 16.86 0.00 43.36 4.18
457 458 1.629345 CGACGCCCTTTAAACCCGTC 61.629 60.000 15.26 15.26 43.29 4.79
458 459 1.668793 CGACGCCCTTTAAACCCGT 60.669 57.895 3.55 3.55 34.52 5.28
459 460 2.392974 CCGACGCCCTTTAAACCCG 61.393 63.158 0.00 0.00 0.00 5.28
460 461 2.042259 CCCGACGCCCTTTAAACCC 61.042 63.158 0.00 0.00 0.00 4.11
461 462 2.693762 GCCCGACGCCCTTTAAACC 61.694 63.158 0.00 0.00 0.00 3.27
462 463 1.310216 ATGCCCGACGCCCTTTAAAC 61.310 55.000 0.00 0.00 36.24 2.01
463 464 0.252479 TATGCCCGACGCCCTTTAAA 59.748 50.000 0.00 0.00 36.24 1.52
464 465 0.462403 GTATGCCCGACGCCCTTTAA 60.462 55.000 0.00 0.00 36.24 1.52
465 466 1.144496 GTATGCCCGACGCCCTTTA 59.856 57.895 0.00 0.00 36.24 1.85
466 467 2.124860 GTATGCCCGACGCCCTTT 60.125 61.111 0.00 0.00 36.24 3.11
467 468 4.171103 GGTATGCCCGACGCCCTT 62.171 66.667 0.00 0.00 36.24 3.95
477 478 0.623723 TGAGGTGAAAGGGGTATGCC 59.376 55.000 0.00 0.00 0.00 4.40
478 479 1.682087 GGTGAGGTGAAAGGGGTATGC 60.682 57.143 0.00 0.00 0.00 3.14
479 480 1.064685 GGGTGAGGTGAAAGGGGTATG 60.065 57.143 0.00 0.00 0.00 2.39
480 481 1.296002 GGGTGAGGTGAAAGGGGTAT 58.704 55.000 0.00 0.00 0.00 2.73
481 482 0.843343 GGGGTGAGGTGAAAGGGGTA 60.843 60.000 0.00 0.00 0.00 3.69
482 483 2.160853 GGGGTGAGGTGAAAGGGGT 61.161 63.158 0.00 0.00 0.00 4.95
483 484 1.852626 AGGGGTGAGGTGAAAGGGG 60.853 63.158 0.00 0.00 0.00 4.79
484 485 1.685820 GAGGGGTGAGGTGAAAGGG 59.314 63.158 0.00 0.00 0.00 3.95
485 486 1.296715 CGAGGGGTGAGGTGAAAGG 59.703 63.158 0.00 0.00 0.00 3.11
486 487 1.376037 GCGAGGGGTGAGGTGAAAG 60.376 63.158 0.00 0.00 0.00 2.62
487 488 2.747686 GCGAGGGGTGAGGTGAAA 59.252 61.111 0.00 0.00 0.00 2.69
488 489 3.691342 CGCGAGGGGTGAGGTGAA 61.691 66.667 0.00 0.00 0.00 3.18
489 490 3.572447 TACGCGAGGGGTGAGGTGA 62.572 63.158 15.93 0.00 0.00 4.02
490 491 3.066190 TACGCGAGGGGTGAGGTG 61.066 66.667 15.93 0.00 0.00 4.00
491 492 3.066814 GTACGCGAGGGGTGAGGT 61.067 66.667 15.93 0.00 0.00 3.85
492 493 3.834799 GGTACGCGAGGGGTGAGG 61.835 72.222 15.93 0.00 0.00 3.86
503 504 4.783621 GGGTTTCCCCCGGTACGC 62.784 72.222 0.00 0.00 44.46 4.42
512 513 1.212195 GGACATGTCCTAGGGTTTCCC 59.788 57.143 33.47 6.83 46.16 3.97
513 514 2.711978 GGACATGTCCTAGGGTTTCC 57.288 55.000 33.47 7.36 46.16 3.13
518 519 2.808206 GCCCGGACATGTCCTAGGG 61.808 68.421 36.28 36.28 46.90 3.53
523 524 2.033448 TGTTGCCCGGACATGTCC 59.967 61.111 31.59 31.59 46.18 4.02
524 525 2.690778 GCTGTTGCCCGGACATGTC 61.691 63.158 17.91 17.91 0.00 3.06
525 526 2.672996 GCTGTTGCCCGGACATGT 60.673 61.111 0.73 0.00 0.00 3.21
526 527 3.803082 CGCTGTTGCCCGGACATG 61.803 66.667 0.73 0.00 35.36 3.21
527 528 4.329545 ACGCTGTTGCCCGGACAT 62.330 61.111 0.73 0.00 35.36 3.06
528 529 4.980805 GACGCTGTTGCCCGGACA 62.981 66.667 0.73 0.00 35.36 4.02
533 534 2.740714 GATGACGACGCTGTTGCCC 61.741 63.158 0.00 0.00 35.36 5.36
534 535 2.778679 GATGACGACGCTGTTGCC 59.221 61.111 0.00 0.00 35.36 4.52
535 536 2.267227 GACGATGACGACGCTGTTGC 62.267 60.000 0.00 0.00 42.66 4.17
536 537 1.696644 GACGATGACGACGCTGTTG 59.303 57.895 0.00 0.00 42.66 3.33
537 538 4.148230 GACGATGACGACGCTGTT 57.852 55.556 0.00 0.00 42.66 3.16
543 544 2.004489 GGATCGCGACGATGACGAC 61.004 63.158 12.93 4.89 47.00 4.34
544 545 1.712018 AAGGATCGCGACGATGACGA 61.712 55.000 12.93 0.00 47.00 4.20
545 546 1.262824 GAAGGATCGCGACGATGACG 61.263 60.000 12.93 0.00 47.00 4.35
546 547 0.029567 AGAAGGATCGCGACGATGAC 59.970 55.000 12.93 10.86 47.00 3.06
547 548 0.738975 AAGAAGGATCGCGACGATGA 59.261 50.000 12.93 0.00 47.00 2.92
548 549 0.848942 CAAGAAGGATCGCGACGATG 59.151 55.000 12.93 0.00 47.00 3.84
550 551 0.098905 CTCAAGAAGGATCGCGACGA 59.901 55.000 12.93 4.51 41.13 4.20
551 552 2.571528 CTCAAGAAGGATCGCGACG 58.428 57.895 12.93 0.00 0.00 5.12
560 561 2.362077 CCAAACAACACCCTCAAGAAGG 59.638 50.000 0.00 0.00 45.77 3.46
561 562 3.023832 ACCAAACAACACCCTCAAGAAG 58.976 45.455 0.00 0.00 0.00 2.85
562 563 3.094484 ACCAAACAACACCCTCAAGAA 57.906 42.857 0.00 0.00 0.00 2.52
563 564 2.818751 ACCAAACAACACCCTCAAGA 57.181 45.000 0.00 0.00 0.00 3.02
564 565 3.305335 GCATACCAAACAACACCCTCAAG 60.305 47.826 0.00 0.00 0.00 3.02
565 566 2.625790 GCATACCAAACAACACCCTCAA 59.374 45.455 0.00 0.00 0.00 3.02
566 567 2.235016 GCATACCAAACAACACCCTCA 58.765 47.619 0.00 0.00 0.00 3.86
567 568 1.199097 CGCATACCAAACAACACCCTC 59.801 52.381 0.00 0.00 0.00 4.30
568 569 1.243902 CGCATACCAAACAACACCCT 58.756 50.000 0.00 0.00 0.00 4.34
569 570 0.242555 CCGCATACCAAACAACACCC 59.757 55.000 0.00 0.00 0.00 4.61
570 571 0.388006 GCCGCATACCAAACAACACC 60.388 55.000 0.00 0.00 0.00 4.16
571 572 0.727793 CGCCGCATACCAAACAACAC 60.728 55.000 0.00 0.00 0.00 3.32
572 573 1.576920 CGCCGCATACCAAACAACA 59.423 52.632 0.00 0.00 0.00 3.33
573 574 1.154112 CCGCCGCATACCAAACAAC 60.154 57.895 0.00 0.00 0.00 3.32
574 575 1.579084 GACCGCCGCATACCAAACAA 61.579 55.000 0.00 0.00 0.00 2.83
575 576 2.032834 ACCGCCGCATACCAAACA 59.967 55.556 0.00 0.00 0.00 2.83
576 577 2.757056 GGACCGCCGCATACCAAAC 61.757 63.158 0.00 0.00 0.00 2.93
577 578 2.437002 GGACCGCCGCATACCAAA 60.437 61.111 0.00 0.00 0.00 3.28
587 588 2.280186 CTAGCATTCCGGACCGCC 60.280 66.667 18.40 1.99 0.00 6.13
588 589 2.280186 CCTAGCATTCCGGACCGC 60.280 66.667 15.08 15.08 0.00 5.68
589 590 1.364171 CTCCTAGCATTCCGGACCG 59.636 63.158 1.83 6.99 0.00 4.79
590 591 1.069935 GCTCCTAGCATTCCGGACC 59.930 63.158 1.83 0.00 41.89 4.46
591 592 1.300233 CGCTCCTAGCATTCCGGAC 60.300 63.158 1.83 0.00 42.58 4.79
592 593 1.756950 ACGCTCCTAGCATTCCGGA 60.757 57.895 0.00 0.00 42.58 5.14
593 594 1.592669 CACGCTCCTAGCATTCCGG 60.593 63.158 0.00 0.00 42.58 5.14
594 595 1.592669 CCACGCTCCTAGCATTCCG 60.593 63.158 0.00 0.00 42.58 4.30
595 596 0.811616 CACCACGCTCCTAGCATTCC 60.812 60.000 0.00 0.00 42.58 3.01
596 597 0.811616 CCACCACGCTCCTAGCATTC 60.812 60.000 0.00 0.00 42.58 2.67
597 598 1.221840 CCACCACGCTCCTAGCATT 59.778 57.895 0.00 0.00 42.58 3.56
598 599 0.686441 TACCACCACGCTCCTAGCAT 60.686 55.000 0.00 0.00 42.58 3.79
599 600 0.686441 ATACCACCACGCTCCTAGCA 60.686 55.000 0.00 0.00 42.58 3.49
600 601 0.464452 AATACCACCACGCTCCTAGC 59.536 55.000 0.00 0.00 38.02 3.42
601 602 2.981859 AAATACCACCACGCTCCTAG 57.018 50.000 0.00 0.00 0.00 3.02
602 603 2.093341 GGAAAATACCACCACGCTCCTA 60.093 50.000 0.00 0.00 0.00 2.94
603 604 1.339727 GGAAAATACCACCACGCTCCT 60.340 52.381 0.00 0.00 0.00 3.69
604 605 1.092348 GGAAAATACCACCACGCTCC 58.908 55.000 0.00 0.00 0.00 4.70
605 606 0.725117 CGGAAAATACCACCACGCTC 59.275 55.000 0.00 0.00 0.00 5.03
606 607 0.675522 CCGGAAAATACCACCACGCT 60.676 55.000 0.00 0.00 0.00 5.07
607 608 0.956902 ACCGGAAAATACCACCACGC 60.957 55.000 9.46 0.00 0.00 5.34
608 609 0.800012 CACCGGAAAATACCACCACG 59.200 55.000 9.46 0.00 0.00 4.94
609 610 1.170442 CCACCGGAAAATACCACCAC 58.830 55.000 9.46 0.00 0.00 4.16
610 611 0.038455 CCCACCGGAAAATACCACCA 59.962 55.000 9.46 0.00 0.00 4.17
611 612 1.317431 GCCCACCGGAAAATACCACC 61.317 60.000 9.46 0.00 0.00 4.61
612 613 1.650314 CGCCCACCGGAAAATACCAC 61.650 60.000 9.46 0.00 0.00 4.16
613 614 1.377463 CGCCCACCGGAAAATACCA 60.377 57.895 9.46 0.00 0.00 3.25
614 615 2.767445 GCGCCCACCGGAAAATACC 61.767 63.158 9.46 0.00 37.44 2.73
615 616 2.795973 GCGCCCACCGGAAAATAC 59.204 61.111 9.46 0.00 37.44 1.89
616 617 2.820479 CGCGCCCACCGGAAAATA 60.820 61.111 9.46 0.00 37.44 1.40
633 634 3.757248 ATGAGGATCCGCAACCGCC 62.757 63.158 22.69 0.00 33.11 6.13
634 635 2.203070 ATGAGGATCCGCAACCGC 60.203 61.111 22.69 0.09 0.00 5.68
635 636 1.951130 CGATGAGGATCCGCAACCG 60.951 63.158 22.69 22.23 0.00 4.44
636 637 0.462047 AACGATGAGGATCCGCAACC 60.462 55.000 22.69 15.34 0.00 3.77
637 638 1.369625 AAACGATGAGGATCCGCAAC 58.630 50.000 22.69 18.34 0.00 4.17
638 639 2.006888 GAAAACGATGAGGATCCGCAA 58.993 47.619 22.69 6.19 0.00 4.85
639 640 1.651987 GAAAACGATGAGGATCCGCA 58.348 50.000 21.16 21.16 0.00 5.69
640 641 0.577269 CGAAAACGATGAGGATCCGC 59.423 55.000 8.81 8.81 0.00 5.54
641 642 1.922570 ACGAAAACGATGAGGATCCG 58.077 50.000 5.98 0.00 0.00 4.18
642 643 3.259064 TCAACGAAAACGATGAGGATCC 58.741 45.455 2.48 2.48 0.00 3.36
643 644 4.025647 GGATCAACGAAAACGATGAGGATC 60.026 45.833 8.30 0.00 0.00 3.36
644 645 3.871594 GGATCAACGAAAACGATGAGGAT 59.128 43.478 8.30 0.00 0.00 3.24
645 646 3.259064 GGATCAACGAAAACGATGAGGA 58.741 45.455 8.30 0.00 0.00 3.71
646 647 2.029244 CGGATCAACGAAAACGATGAGG 59.971 50.000 8.30 0.00 35.47 3.86
647 648 2.534939 GCGGATCAACGAAAACGATGAG 60.535 50.000 8.30 0.00 35.47 2.90
648 649 1.392168 GCGGATCAACGAAAACGATGA 59.608 47.619 0.00 0.00 35.47 2.92
649 650 1.529010 GGCGGATCAACGAAAACGATG 60.529 52.381 0.00 0.00 35.47 3.84
650 651 0.725117 GGCGGATCAACGAAAACGAT 59.275 50.000 0.00 0.00 35.47 3.73
651 652 1.619526 CGGCGGATCAACGAAAACGA 61.620 55.000 0.00 0.00 35.47 3.85
652 653 1.225637 CGGCGGATCAACGAAAACG 60.226 57.895 0.00 0.00 35.47 3.60
653 654 0.179233 GACGGCGGATCAACGAAAAC 60.179 55.000 13.24 0.00 35.47 2.43
654 655 1.619526 CGACGGCGGATCAACGAAAA 61.620 55.000 13.24 0.00 35.47 2.29
655 656 2.089936 CGACGGCGGATCAACGAAA 61.090 57.895 13.24 0.00 35.47 3.46
656 657 2.505337 CGACGGCGGATCAACGAA 60.505 61.111 13.24 0.00 35.47 3.85
657 658 3.271706 AACGACGGCGGATCAACGA 62.272 57.895 18.49 0.00 43.17 3.85
658 659 2.807895 AACGACGGCGGATCAACG 60.808 61.111 18.49 9.34 43.17 4.10
659 660 2.736682 CCAACGACGGCGGATCAAC 61.737 63.158 18.49 0.00 43.17 3.18
660 661 2.433491 CCAACGACGGCGGATCAA 60.433 61.111 18.49 0.00 43.17 2.57
668 669 3.374058 AGAGAAAATAATGCCAACGACGG 59.626 43.478 0.00 0.00 0.00 4.79
669 670 4.600012 AGAGAAAATAATGCCAACGACG 57.400 40.909 0.00 0.00 0.00 5.12
670 671 5.938322 TGAAGAGAAAATAATGCCAACGAC 58.062 37.500 0.00 0.00 0.00 4.34
671 672 5.705441 ACTGAAGAGAAAATAATGCCAACGA 59.295 36.000 0.00 0.00 0.00 3.85
672 673 5.942872 ACTGAAGAGAAAATAATGCCAACG 58.057 37.500 0.00 0.00 0.00 4.10
673 674 8.084684 AGAAACTGAAGAGAAAATAATGCCAAC 58.915 33.333 0.00 0.00 0.00 3.77
674 675 8.181904 AGAAACTGAAGAGAAAATAATGCCAA 57.818 30.769 0.00 0.00 0.00 4.52
675 676 7.765695 AGAAACTGAAGAGAAAATAATGCCA 57.234 32.000 0.00 0.00 0.00 4.92
676 677 9.481340 AAAAGAAACTGAAGAGAAAATAATGCC 57.519 29.630 0.00 0.00 0.00 4.40
701 702 4.688413 ACGCAAGCTCAAAAGAAACAAAAA 59.312 33.333 0.00 0.00 45.62 1.94
702 703 4.091220 CACGCAAGCTCAAAAGAAACAAAA 59.909 37.500 0.00 0.00 45.62 2.44
703 704 3.611986 CACGCAAGCTCAAAAGAAACAAA 59.388 39.130 0.00 0.00 45.62 2.83
704 705 3.178267 CACGCAAGCTCAAAAGAAACAA 58.822 40.909 0.00 0.00 45.62 2.83
705 706 2.163412 ACACGCAAGCTCAAAAGAAACA 59.837 40.909 0.00 0.00 45.62 2.83
706 707 2.531508 CACACGCAAGCTCAAAAGAAAC 59.468 45.455 0.00 0.00 45.62 2.78
707 708 2.796304 CACACGCAAGCTCAAAAGAAA 58.204 42.857 0.00 0.00 45.62 2.52
708 709 1.533756 GCACACGCAAGCTCAAAAGAA 60.534 47.619 0.00 0.00 45.62 2.52
709 710 0.029300 GCACACGCAAGCTCAAAAGA 59.971 50.000 0.00 0.00 45.62 2.52
710 711 0.029834 AGCACACGCAAGCTCAAAAG 59.970 50.000 0.00 0.00 42.27 2.27
711 712 0.248580 CAGCACACGCAAGCTCAAAA 60.249 50.000 0.00 0.00 39.50 2.44
712 713 1.356270 CAGCACACGCAAGCTCAAA 59.644 52.632 0.00 0.00 39.50 2.69
713 714 1.819208 ACAGCACACGCAAGCTCAA 60.819 52.632 0.00 0.00 39.50 3.02
714 715 2.203056 ACAGCACACGCAAGCTCA 60.203 55.556 0.00 0.00 39.50 4.26
715 716 2.250485 CACAGCACACGCAAGCTC 59.750 61.111 0.00 0.00 39.50 4.09
716 717 3.282157 CCACAGCACACGCAAGCT 61.282 61.111 0.00 0.00 42.94 3.74
717 718 4.988486 GCCACAGCACACGCAAGC 62.988 66.667 0.00 0.00 42.27 4.01
718 719 4.332637 GGCCACAGCACACGCAAG 62.333 66.667 0.00 0.00 42.56 4.01
728 729 0.611618 TACAAATGCTGGGGCCACAG 60.612 55.000 31.74 31.74 41.41 3.66
729 730 0.040942 ATACAAATGCTGGGGCCACA 59.959 50.000 7.89 7.89 37.74 4.17
730 731 0.746659 GATACAAATGCTGGGGCCAC 59.253 55.000 4.39 0.00 37.74 5.01
731 732 0.751277 CGATACAAATGCTGGGGCCA 60.751 55.000 4.39 0.00 37.74 5.36
732 733 0.751643 ACGATACAAATGCTGGGGCC 60.752 55.000 0.00 0.00 37.74 5.80
733 734 0.381801 CACGATACAAATGCTGGGGC 59.618 55.000 0.00 0.00 39.26 5.80
734 735 1.401552 CACACGATACAAATGCTGGGG 59.598 52.381 0.00 0.00 0.00 4.96
735 736 1.401552 CCACACGATACAAATGCTGGG 59.598 52.381 0.00 0.00 0.00 4.45
736 737 2.083774 ACCACACGATACAAATGCTGG 58.916 47.619 0.00 0.00 0.00 4.85
737 738 2.222796 CGACCACACGATACAAATGCTG 60.223 50.000 0.00 0.00 35.09 4.41
738 739 1.999735 CGACCACACGATACAAATGCT 59.000 47.619 0.00 0.00 35.09 3.79
739 740 1.730064 ACGACCACACGATACAAATGC 59.270 47.619 0.00 0.00 37.03 3.56
740 741 3.731855 CAACGACCACACGATACAAATG 58.268 45.455 0.00 0.00 37.03 2.32
741 742 2.158841 GCAACGACCACACGATACAAAT 59.841 45.455 0.00 0.00 37.03 2.32
742 743 1.527736 GCAACGACCACACGATACAAA 59.472 47.619 0.00 0.00 37.03 2.83
743 744 1.141645 GCAACGACCACACGATACAA 58.858 50.000 0.00 0.00 37.03 2.41
744 745 0.315886 AGCAACGACCACACGATACA 59.684 50.000 0.00 0.00 37.03 2.29
745 746 1.425412 AAGCAACGACCACACGATAC 58.575 50.000 0.00 0.00 37.03 2.24
746 747 2.157834 AAAGCAACGACCACACGATA 57.842 45.000 0.00 0.00 37.03 2.92
747 748 2.157834 TAAAGCAACGACCACACGAT 57.842 45.000 0.00 0.00 37.03 3.73
748 749 2.157834 ATAAAGCAACGACCACACGA 57.842 45.000 0.00 0.00 37.03 4.35
749 750 4.593597 ATTATAAAGCAACGACCACACG 57.406 40.909 0.00 0.00 39.31 4.49
750 751 9.646336 CTTTATATTATAAAGCAACGACCACAC 57.354 33.333 18.54 0.00 0.00 3.82
751 752 9.386010 ACTTTATATTATAAAGCAACGACCACA 57.614 29.630 25.76 0.00 37.89 4.17
752 753 9.646336 CACTTTATATTATAAAGCAACGACCAC 57.354 33.333 25.76 0.00 37.89 4.16
753 754 8.832521 CCACTTTATATTATAAAGCAACGACCA 58.167 33.333 25.76 0.00 37.89 4.02
754 755 8.287503 CCCACTTTATATTATAAAGCAACGACC 58.712 37.037 25.76 0.00 37.89 4.79
755 756 8.287503 CCCCACTTTATATTATAAAGCAACGAC 58.712 37.037 25.76 0.00 37.89 4.34
756 757 7.446013 CCCCCACTTTATATTATAAAGCAACGA 59.554 37.037 25.76 0.61 37.89 3.85
757 758 7.590279 CCCCCACTTTATATTATAAAGCAACG 58.410 38.462 25.76 16.15 37.89 4.10
781 782 2.224426 CCTTTACCAAAAAGGGTTGCCC 60.224 50.000 8.38 0.00 45.90 5.36
782 783 3.120321 CCTTTACCAAAAAGGGTTGCC 57.880 47.619 8.38 0.00 42.32 4.52
803 804 8.851361 CGTCACCTGTAGACCTAGAGCATCTA 62.851 50.000 0.00 0.00 46.59 1.98
805 806 3.316868 GTCACCTGTAGACCTAGAGCATC 59.683 52.174 0.00 0.00 0.00 3.91
806 807 3.292460 GTCACCTGTAGACCTAGAGCAT 58.708 50.000 0.00 0.00 0.00 3.79
807 808 2.724454 GTCACCTGTAGACCTAGAGCA 58.276 52.381 0.00 0.00 0.00 4.26
808 809 1.671845 CGTCACCTGTAGACCTAGAGC 59.328 57.143 0.00 0.00 32.41 4.09
809 810 2.290464 CCGTCACCTGTAGACCTAGAG 58.710 57.143 0.00 0.00 32.41 2.43
810 811 1.681166 GCCGTCACCTGTAGACCTAGA 60.681 57.143 0.00 0.00 32.41 2.43
811 812 0.739561 GCCGTCACCTGTAGACCTAG 59.260 60.000 0.00 0.00 32.41 3.02
812 813 0.330604 AGCCGTCACCTGTAGACCTA 59.669 55.000 0.00 0.00 32.41 3.08
813 814 1.076906 AGCCGTCACCTGTAGACCT 59.923 57.895 0.00 0.00 32.41 3.85
814 815 1.215647 CAGCCGTCACCTGTAGACC 59.784 63.158 0.00 0.00 32.41 3.85
815 816 1.446272 GCAGCCGTCACCTGTAGAC 60.446 63.158 0.00 0.00 32.93 2.59
816 817 1.185618 AAGCAGCCGTCACCTGTAGA 61.186 55.000 0.00 0.00 32.93 2.59
817 818 0.737715 GAAGCAGCCGTCACCTGTAG 60.738 60.000 0.00 0.00 32.93 2.74
818 819 1.292223 GAAGCAGCCGTCACCTGTA 59.708 57.895 0.00 0.00 32.93 2.74
819 820 2.031163 GAAGCAGCCGTCACCTGT 59.969 61.111 0.00 0.00 32.93 4.00
820 821 2.738213 AAGGAAGCAGCCGTCACCTG 62.738 60.000 0.00 0.00 0.00 4.00
821 822 2.056906 AAAGGAAGCAGCCGTCACCT 62.057 55.000 0.00 0.00 0.00 4.00
822 823 1.578206 GAAAGGAAGCAGCCGTCACC 61.578 60.000 0.00 0.00 0.00 4.02
823 824 0.884704 TGAAAGGAAGCAGCCGTCAC 60.885 55.000 0.00 0.00 0.00 3.67
824 825 0.036732 ATGAAAGGAAGCAGCCGTCA 59.963 50.000 0.00 6.71 33.38 4.35
825 826 1.936547 CTATGAAAGGAAGCAGCCGTC 59.063 52.381 0.00 0.00 0.00 4.79
826 827 1.279271 ACTATGAAAGGAAGCAGCCGT 59.721 47.619 0.00 0.00 0.00 5.68
827 828 2.029838 ACTATGAAAGGAAGCAGCCG 57.970 50.000 0.00 0.00 0.00 5.52
828 829 3.758554 TGAAACTATGAAAGGAAGCAGCC 59.241 43.478 0.00 0.00 0.00 4.85
829 830 5.573337 ATGAAACTATGAAAGGAAGCAGC 57.427 39.130 0.00 0.00 0.00 5.25
830 831 6.405176 GGGAATGAAACTATGAAAGGAAGCAG 60.405 42.308 0.00 0.00 0.00 4.24
831 832 5.418840 GGGAATGAAACTATGAAAGGAAGCA 59.581 40.000 0.00 0.00 0.00 3.91
832 833 5.654209 AGGGAATGAAACTATGAAAGGAAGC 59.346 40.000 0.00 0.00 0.00 3.86
833 834 6.319911 GGAGGGAATGAAACTATGAAAGGAAG 59.680 42.308 0.00 0.00 0.00 3.46
834 835 6.187682 GGAGGGAATGAAACTATGAAAGGAA 58.812 40.000 0.00 0.00 0.00 3.36
835 836 5.340027 GGGAGGGAATGAAACTATGAAAGGA 60.340 44.000 0.00 0.00 0.00 3.36
836 837 4.889995 GGGAGGGAATGAAACTATGAAAGG 59.110 45.833 0.00 0.00 0.00 3.11
837 838 4.889995 GGGGAGGGAATGAAACTATGAAAG 59.110 45.833 0.00 0.00 0.00 2.62
838 839 4.627741 CGGGGAGGGAATGAAACTATGAAA 60.628 45.833 0.00 0.00 0.00 2.69
839 840 3.118038 CGGGGAGGGAATGAAACTATGAA 60.118 47.826 0.00 0.00 0.00 2.57
840 841 2.438021 CGGGGAGGGAATGAAACTATGA 59.562 50.000 0.00 0.00 0.00 2.15
841 842 2.851195 CGGGGAGGGAATGAAACTATG 58.149 52.381 0.00 0.00 0.00 2.23
842 843 1.143073 GCGGGGAGGGAATGAAACTAT 59.857 52.381 0.00 0.00 0.00 2.12
843 844 0.544697 GCGGGGAGGGAATGAAACTA 59.455 55.000 0.00 0.00 0.00 2.24
844 845 1.303282 GCGGGGAGGGAATGAAACT 59.697 57.895 0.00 0.00 0.00 2.66
845 846 1.753078 GGCGGGGAGGGAATGAAAC 60.753 63.158 0.00 0.00 0.00 2.78
894 895 2.046217 GGGAAGGAAGCGGTGTCC 60.046 66.667 7.49 7.49 35.17 4.02
946 947 1.614226 TGTAGGGTTTCGGGGAGGG 60.614 63.158 0.00 0.00 0.00 4.30
947 948 1.600638 GTGTAGGGTTTCGGGGAGG 59.399 63.158 0.00 0.00 0.00 4.30
948 949 1.600638 GGTGTAGGGTTTCGGGGAG 59.399 63.158 0.00 0.00 0.00 4.30
949 950 1.919816 GGGTGTAGGGTTTCGGGGA 60.920 63.158 0.00 0.00 0.00 4.81
1036 1094 2.698168 GGGGGTGGCTCTTACTCTT 58.302 57.895 0.00 0.00 0.00 2.85
1037 1095 4.482431 GGGGGTGGCTCTTACTCT 57.518 61.111 0.00 0.00 0.00 3.24
1066 1124 2.370445 ATCAACGGCAGAGAGGGGG 61.370 63.158 0.00 0.00 0.00 5.40
1067 1125 1.153289 CATCAACGGCAGAGAGGGG 60.153 63.158 0.00 0.00 0.00 4.79
1068 1126 1.153289 CCATCAACGGCAGAGAGGG 60.153 63.158 0.00 0.00 0.00 4.30
1069 1127 0.250234 TTCCATCAACGGCAGAGAGG 59.750 55.000 0.00 0.00 0.00 3.69
1070 1128 1.938577 CATTCCATCAACGGCAGAGAG 59.061 52.381 0.00 0.00 0.00 3.20
1071 1129 2.013563 GCATTCCATCAACGGCAGAGA 61.014 52.381 0.00 0.00 0.00 3.10
1072 1130 0.379669 GCATTCCATCAACGGCAGAG 59.620 55.000 0.00 0.00 0.00 3.35
1073 1131 1.031571 GGCATTCCATCAACGGCAGA 61.032 55.000 0.00 0.00 0.00 4.26
1074 1132 1.434696 GGCATTCCATCAACGGCAG 59.565 57.895 0.00 0.00 0.00 4.85
1075 1133 2.405805 CGGCATTCCATCAACGGCA 61.406 57.895 0.00 0.00 0.00 5.69
1076 1134 1.092921 TACGGCATTCCATCAACGGC 61.093 55.000 0.00 0.00 0.00 5.68
1077 1135 1.264020 CATACGGCATTCCATCAACGG 59.736 52.381 0.00 0.00 0.00 4.44
1078 1136 2.209273 TCATACGGCATTCCATCAACG 58.791 47.619 0.00 0.00 0.00 4.10
1079 1137 3.189287 GGATCATACGGCATTCCATCAAC 59.811 47.826 0.00 0.00 0.00 3.18
1080 1138 3.181446 TGGATCATACGGCATTCCATCAA 60.181 43.478 0.00 0.00 31.67 2.57
1081 1139 2.371510 TGGATCATACGGCATTCCATCA 59.628 45.455 0.00 0.00 31.67 3.07
1082 1140 3.057969 TGGATCATACGGCATTCCATC 57.942 47.619 0.00 0.00 31.67 3.51
1083 1141 3.726557 ATGGATCATACGGCATTCCAT 57.273 42.857 0.00 0.00 41.29 3.41
1084 1142 3.507162 AATGGATCATACGGCATTCCA 57.493 42.857 0.00 0.00 40.54 3.53
1085 1143 5.882557 AGAATAATGGATCATACGGCATTCC 59.117 40.000 0.00 0.00 0.00 3.01
1086 1144 6.992063 AGAATAATGGATCATACGGCATTC 57.008 37.500 0.00 0.00 0.00 2.67
1087 1145 6.375455 GGAAGAATAATGGATCATACGGCATT 59.625 38.462 0.00 0.00 0.00 3.56
1088 1146 5.882557 GGAAGAATAATGGATCATACGGCAT 59.117 40.000 0.00 0.00 0.00 4.40
1089 1147 5.013079 AGGAAGAATAATGGATCATACGGCA 59.987 40.000 0.00 0.00 0.00 5.69
1090 1148 5.491982 AGGAAGAATAATGGATCATACGGC 58.508 41.667 0.00 0.00 0.00 5.68
1091 1149 6.936900 ACAAGGAAGAATAATGGATCATACGG 59.063 38.462 0.00 0.00 0.00 4.02
1092 1150 7.969536 ACAAGGAAGAATAATGGATCATACG 57.030 36.000 0.00 0.00 0.00 3.06
1101 1159 6.599437 ACGTTCGAAACAAGGAAGAATAATG 58.401 36.000 0.00 0.00 0.00 1.90
1151 1473 1.836999 GCCACCCAACCCCAAATTCC 61.837 60.000 0.00 0.00 0.00 3.01
1171 1493 0.462759 GATCTGAAGTTCGCAGGGGG 60.463 60.000 0.00 0.00 34.20 5.40
1172 1494 0.462759 GGATCTGAAGTTCGCAGGGG 60.463 60.000 0.00 0.00 34.20 4.79
1299 1629 0.099436 GCCCACTGATTTCGTGATGC 59.901 55.000 0.00 0.00 34.35 3.91
1301 1631 1.369091 GCGCCCACTGATTTCGTGAT 61.369 55.000 0.00 0.00 34.35 3.06
1336 1666 1.880601 CTTGCACAGACGAGACACGC 61.881 60.000 0.00 0.00 46.94 5.34
1369 1699 1.807814 GAGCAGAAGGGGGAGGATTA 58.192 55.000 0.00 0.00 0.00 1.75
1370 1700 1.341156 CGAGCAGAAGGGGGAGGATT 61.341 60.000 0.00 0.00 0.00 3.01
1371 1701 1.764054 CGAGCAGAAGGGGGAGGAT 60.764 63.158 0.00 0.00 0.00 3.24
1372 1702 2.364317 CGAGCAGAAGGGGGAGGA 60.364 66.667 0.00 0.00 0.00 3.71
1435 1765 2.754946 TTGGTAGTTCTAGCAACGGG 57.245 50.000 16.94 0.00 33.17 5.28
1438 1768 6.147985 CCTTCTTCTTTGGTAGTTCTAGCAAC 59.852 42.308 19.50 0.00 37.20 4.17
1451 1781 1.589716 CGCAGGCCCTTCTTCTTTGG 61.590 60.000 0.00 0.00 0.00 3.28
1673 2010 1.180456 TGCAAGGGGAACACAGCATG 61.180 55.000 0.00 0.00 46.00 4.06
1926 2445 1.952621 ACCTAAGCCAGTAAGCCTCA 58.047 50.000 0.00 0.00 0.00 3.86
1959 2478 8.383318 ACAAAATGCAGTACATATCCAGATAC 57.617 34.615 0.00 0.00 38.34 2.24
2209 2728 8.857694 ATTTGATCTTCAAGCCAAATGAAAAT 57.142 26.923 13.46 0.00 37.70 1.82
2236 2755 6.632909 CAATGATGCACCTCCAAGAATAAAA 58.367 36.000 0.00 0.00 0.00 1.52
2291 2811 9.855361 GAATCACGATTTTGAGAACATATAGTG 57.145 33.333 0.00 0.00 31.89 2.74
2375 2895 2.123589 TCAAGGACTTCCCACAGACAA 58.876 47.619 0.00 0.00 37.41 3.18
2436 2956 8.538409 AAAAGAACATAAGGAAATGCATCAAC 57.462 30.769 0.00 0.00 0.00 3.18
2581 3104 7.296856 AGTAGGGTAATCTTTAGAGGTAGGAC 58.703 42.308 0.00 0.00 0.00 3.85
2687 3210 3.725490 AGACCTTGACAAAGTCGGTTAC 58.275 45.455 10.54 0.00 34.95 2.50
2766 3289 5.643777 TCTCAAAGCATTAGAGCAGTAAACC 59.356 40.000 0.00 0.00 36.85 3.27
2837 3364 2.609244 CCGCAGAGGCTTTAGCTAGATC 60.609 54.545 0.00 0.00 41.70 2.75
2907 3436 7.999545 AGATGCAACTAGAGTATGAACCTACTA 59.000 37.037 0.00 0.00 32.11 1.82
2916 3445 6.372659 ACCAAAACAGATGCAACTAGAGTATG 59.627 38.462 0.00 0.00 0.00 2.39
2920 3449 5.695851 AACCAAAACAGATGCAACTAGAG 57.304 39.130 0.00 0.00 0.00 2.43
2987 3516 0.801251 CTTAGCACTGGAGCTGCAAC 59.199 55.000 9.92 1.69 46.11 4.17
3097 3626 7.391275 GTCTAGGGACCTACTAGTATCATGTTC 59.609 44.444 2.33 0.00 39.13 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.