Multiple sequence alignment - TraesCS5B01G064700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G064700 chr5B 100.000 2585 0 0 1 2585 72251895 72254479 0.000000e+00 4774.0
1 TraesCS5B01G064700 chr5B 97.244 1814 34 6 742 2543 63843995 63845804 0.000000e+00 3059.0
2 TraesCS5B01G064700 chr5B 89.687 1629 127 21 939 2542 63631876 63633488 0.000000e+00 2039.0
3 TraesCS5B01G064700 chr5B 85.933 1763 169 41 828 2542 72631528 72629797 0.000000e+00 1808.0
4 TraesCS5B01G064700 chr5B 100.000 59 0 0 2527 2585 63845974 63846032 2.720000e-20 110.0
5 TraesCS5B01G064700 chr5D 93.984 1762 55 18 861 2585 58677544 58679291 0.000000e+00 2619.0
6 TraesCS5B01G064700 chr5D 86.798 1833 163 26 743 2542 58658857 58660643 0.000000e+00 1971.0
7 TraesCS5B01G064700 chr5D 85.551 1834 182 44 754 2542 58946697 58948492 0.000000e+00 1842.0
8 TraesCS5B01G064700 chr5A 90.260 1037 56 13 1082 2110 47120790 47121789 0.000000e+00 1314.0
9 TraesCS5B01G064700 chr5A 83.754 357 20 8 742 1090 47115507 47115833 1.160000e-78 303.0
10 TraesCS5B01G064700 chr5A 95.420 131 4 1 2272 2400 47125038 47125168 9.370000e-50 207.0
11 TraesCS5B01G064700 chr7B 77.398 1376 231 44 1044 2363 558211237 558212588 0.000000e+00 745.0
12 TraesCS5B01G064700 chr7B 96.107 411 16 0 329 739 660672301 660671891 0.000000e+00 671.0
13 TraesCS5B01G064700 chr7B 94.471 416 23 0 325 740 695805158 695805573 2.170000e-180 641.0
14 TraesCS5B01G064700 chr7D 78.459 1207 202 35 1044 2214 523195511 523196695 0.000000e+00 736.0
15 TraesCS5B01G064700 chr4A 95.377 411 18 1 329 739 735935731 735935322 0.000000e+00 652.0
16 TraesCS5B01G064700 chr2B 95.388 412 16 3 329 739 756160499 756160090 0.000000e+00 652.0
17 TraesCS5B01G064700 chr2B 95.146 412 18 2 329 739 8954262 8954672 0.000000e+00 649.0
18 TraesCS5B01G064700 chr2B 94.471 416 22 1 329 744 357951508 357951094 7.800000e-180 640.0
19 TraesCS5B01G064700 chr1B 93.911 427 24 2 322 747 8376577 8377002 0.000000e+00 643.0
20 TraesCS5B01G064700 chr1B 94.686 414 20 1 329 740 679746393 679746806 2.170000e-180 641.0
21 TraesCS5B01G064700 chr3B 94.660 412 22 0 329 740 12633407 12632996 7.800000e-180 640.0
22 TraesCS5B01G064700 chr4D 95.000 40 1 1 217 255 403198685 403198724 7.720000e-06 62.1
23 TraesCS5B01G064700 chr2A 91.111 45 3 1 43 86 659158778 659158822 2.780000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G064700 chr5B 72251895 72254479 2584 False 4774.0 4774 100.000 1 2585 1 chr5B.!!$F2 2584
1 TraesCS5B01G064700 chr5B 63631876 63633488 1612 False 2039.0 2039 89.687 939 2542 1 chr5B.!!$F1 1603
2 TraesCS5B01G064700 chr5B 72629797 72631528 1731 True 1808.0 1808 85.933 828 2542 1 chr5B.!!$R1 1714
3 TraesCS5B01G064700 chr5B 63843995 63846032 2037 False 1584.5 3059 98.622 742 2585 2 chr5B.!!$F3 1843
4 TraesCS5B01G064700 chr5D 58677544 58679291 1747 False 2619.0 2619 93.984 861 2585 1 chr5D.!!$F2 1724
5 TraesCS5B01G064700 chr5D 58658857 58660643 1786 False 1971.0 1971 86.798 743 2542 1 chr5D.!!$F1 1799
6 TraesCS5B01G064700 chr5D 58946697 58948492 1795 False 1842.0 1842 85.551 754 2542 1 chr5D.!!$F3 1788
7 TraesCS5B01G064700 chr5A 47120790 47125168 4378 False 760.5 1314 92.840 1082 2400 2 chr5A.!!$F2 1318
8 TraesCS5B01G064700 chr7B 558211237 558212588 1351 False 745.0 745 77.398 1044 2363 1 chr7B.!!$F1 1319
9 TraesCS5B01G064700 chr7D 523195511 523196695 1184 False 736.0 736 78.459 1044 2214 1 chr7D.!!$F1 1170

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
134 135 0.030101 GAGAGCGACGAGATGAAGGG 59.970 60.0 0.00 0.00 0.0 3.95 F
614 615 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.0 10.83 4.83 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1194 1228 2.283529 GGCGTCCTTGACAGGGAGA 61.284 63.158 6.54 0.00 41.25 3.71 R
2222 5524 2.098607 GTGCACCATCAACATGAGGATG 59.901 50.000 18.32 18.32 40.41 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.882671 ATTTGATGCTACAATCGGTGAC 57.117 40.909 0.00 0.00 0.00 3.67
48 49 4.697756 CGGCGAGGTTGAAGGCCA 62.698 66.667 5.01 0.00 45.85 5.36
49 50 2.747855 GGCGAGGTTGAAGGCCAG 60.748 66.667 5.01 0.00 44.91 4.85
50 51 3.435186 GCGAGGTTGAAGGCCAGC 61.435 66.667 5.01 0.00 0.00 4.85
51 52 3.121030 CGAGGTTGAAGGCCAGCG 61.121 66.667 5.01 0.00 0.00 5.18
52 53 2.347490 GAGGTTGAAGGCCAGCGA 59.653 61.111 5.01 0.00 0.00 4.93
53 54 1.743252 GAGGTTGAAGGCCAGCGAG 60.743 63.158 5.01 0.00 0.00 5.03
54 55 2.747855 GGTTGAAGGCCAGCGAGG 60.748 66.667 5.01 0.00 41.84 4.63
55 56 2.747855 GTTGAAGGCCAGCGAGGG 60.748 66.667 5.01 0.00 38.09 4.30
94 95 4.521062 GCAGCGACCCGAGAGCAT 62.521 66.667 0.00 0.00 0.00 3.79
95 96 2.584418 CAGCGACCCGAGAGCATG 60.584 66.667 0.00 0.00 0.00 4.06
96 97 3.071206 AGCGACCCGAGAGCATGT 61.071 61.111 0.00 0.00 0.00 3.21
97 98 2.887568 GCGACCCGAGAGCATGTG 60.888 66.667 0.00 0.00 0.00 3.21
98 99 2.887568 CGACCCGAGAGCATGTGC 60.888 66.667 0.00 0.00 42.49 4.57
119 120 4.521062 CGGCCAGGCGGAAGAGAG 62.521 72.222 13.88 0.00 0.00 3.20
120 121 4.847444 GGCCAGGCGGAAGAGAGC 62.847 72.222 5.00 0.00 0.00 4.09
122 123 3.452786 CCAGGCGGAAGAGAGCGA 61.453 66.667 0.00 0.00 0.00 4.93
123 124 2.202676 CAGGCGGAAGAGAGCGAC 60.203 66.667 0.00 0.00 0.00 5.19
124 125 3.816524 AGGCGGAAGAGAGCGACG 61.817 66.667 0.00 0.00 0.00 5.12
125 126 3.812019 GGCGGAAGAGAGCGACGA 61.812 66.667 0.00 0.00 0.00 4.20
126 127 2.277628 GCGGAAGAGAGCGACGAG 60.278 66.667 0.00 0.00 0.00 4.18
127 128 2.751913 GCGGAAGAGAGCGACGAGA 61.752 63.158 0.00 0.00 0.00 4.04
128 129 2.018544 CGGAAGAGAGCGACGAGAT 58.981 57.895 0.00 0.00 0.00 2.75
129 130 0.316607 CGGAAGAGAGCGACGAGATG 60.317 60.000 0.00 0.00 0.00 2.90
130 131 1.018148 GGAAGAGAGCGACGAGATGA 58.982 55.000 0.00 0.00 0.00 2.92
131 132 1.402259 GGAAGAGAGCGACGAGATGAA 59.598 52.381 0.00 0.00 0.00 2.57
132 133 2.540769 GGAAGAGAGCGACGAGATGAAG 60.541 54.545 0.00 0.00 0.00 3.02
133 134 1.021202 AGAGAGCGACGAGATGAAGG 58.979 55.000 0.00 0.00 0.00 3.46
134 135 0.030101 GAGAGCGACGAGATGAAGGG 59.970 60.000 0.00 0.00 0.00 3.95
135 136 0.394488 AGAGCGACGAGATGAAGGGA 60.394 55.000 0.00 0.00 0.00 4.20
136 137 0.456221 GAGCGACGAGATGAAGGGAA 59.544 55.000 0.00 0.00 0.00 3.97
137 138 1.067821 GAGCGACGAGATGAAGGGAAT 59.932 52.381 0.00 0.00 0.00 3.01
138 139 1.067821 AGCGACGAGATGAAGGGAATC 59.932 52.381 0.00 0.00 0.00 2.52
139 140 1.067821 GCGACGAGATGAAGGGAATCT 59.932 52.381 0.00 0.00 37.09 2.40
140 141 2.482142 GCGACGAGATGAAGGGAATCTT 60.482 50.000 0.00 0.00 34.50 2.40
141 142 3.786635 CGACGAGATGAAGGGAATCTTT 58.213 45.455 0.00 0.00 34.50 2.52
142 143 4.184629 CGACGAGATGAAGGGAATCTTTT 58.815 43.478 0.00 0.00 34.50 2.27
143 144 4.631813 CGACGAGATGAAGGGAATCTTTTT 59.368 41.667 0.00 0.00 34.50 1.94
144 145 5.446473 CGACGAGATGAAGGGAATCTTTTTG 60.446 44.000 0.00 0.00 34.50 2.44
145 146 5.316987 ACGAGATGAAGGGAATCTTTTTGT 58.683 37.500 0.00 0.00 34.50 2.83
146 147 6.472887 ACGAGATGAAGGGAATCTTTTTGTA 58.527 36.000 0.00 0.00 34.50 2.41
147 148 6.371825 ACGAGATGAAGGGAATCTTTTTGTAC 59.628 38.462 0.00 0.00 34.50 2.90
148 149 6.455646 CGAGATGAAGGGAATCTTTTTGTACG 60.456 42.308 0.00 0.00 34.50 3.67
149 150 5.648092 AGATGAAGGGAATCTTTTTGTACGG 59.352 40.000 0.00 0.00 35.50 4.02
150 151 4.076394 TGAAGGGAATCTTTTTGTACGGG 58.924 43.478 0.00 0.00 35.50 5.28
151 152 3.801307 AGGGAATCTTTTTGTACGGGT 57.199 42.857 0.00 0.00 0.00 5.28
152 153 3.418047 AGGGAATCTTTTTGTACGGGTG 58.582 45.455 0.00 0.00 0.00 4.61
153 154 3.151554 GGGAATCTTTTTGTACGGGTGT 58.848 45.455 0.00 0.00 0.00 4.16
154 155 3.057806 GGGAATCTTTTTGTACGGGTGTG 60.058 47.826 0.00 0.00 0.00 3.82
155 156 3.566742 GGAATCTTTTTGTACGGGTGTGT 59.433 43.478 0.00 0.00 0.00 3.72
156 157 4.037089 GGAATCTTTTTGTACGGGTGTGTT 59.963 41.667 0.00 0.00 0.00 3.32
157 158 5.450826 GGAATCTTTTTGTACGGGTGTGTTT 60.451 40.000 0.00 0.00 0.00 2.83
158 159 5.585820 ATCTTTTTGTACGGGTGTGTTTT 57.414 34.783 0.00 0.00 0.00 2.43
159 160 4.734917 TCTTTTTGTACGGGTGTGTTTTG 58.265 39.130 0.00 0.00 0.00 2.44
160 161 4.458295 TCTTTTTGTACGGGTGTGTTTTGA 59.542 37.500 0.00 0.00 0.00 2.69
161 162 3.761311 TTTGTACGGGTGTGTTTTGAC 57.239 42.857 0.00 0.00 0.00 3.18
162 163 2.398252 TGTACGGGTGTGTTTTGACA 57.602 45.000 0.00 0.00 0.00 3.58
163 164 2.708051 TGTACGGGTGTGTTTTGACAA 58.292 42.857 0.00 0.00 0.00 3.18
164 165 3.079578 TGTACGGGTGTGTTTTGACAAA 58.920 40.909 0.00 0.00 0.00 2.83
165 166 2.931512 ACGGGTGTGTTTTGACAAAG 57.068 45.000 0.10 0.00 0.00 2.77
166 167 2.438411 ACGGGTGTGTTTTGACAAAGA 58.562 42.857 0.10 0.00 0.00 2.52
167 168 2.162809 ACGGGTGTGTTTTGACAAAGAC 59.837 45.455 0.10 3.39 36.82 3.01
168 169 2.162608 CGGGTGTGTTTTGACAAAGACA 59.837 45.455 9.61 9.61 42.36 3.41
169 170 3.366476 CGGGTGTGTTTTGACAAAGACAA 60.366 43.478 13.53 0.00 45.13 3.18
170 171 4.561105 GGGTGTGTTTTGACAAAGACAAA 58.439 39.130 13.53 8.43 45.13 2.83
171 172 4.625311 GGGTGTGTTTTGACAAAGACAAAG 59.375 41.667 13.53 0.00 45.13 2.77
172 173 5.227152 GGTGTGTTTTGACAAAGACAAAGT 58.773 37.500 13.53 0.00 45.13 2.66
173 174 5.118510 GGTGTGTTTTGACAAAGACAAAGTG 59.881 40.000 13.53 0.00 45.13 3.16
174 175 4.683781 TGTGTTTTGACAAAGACAAAGTGC 59.316 37.500 13.76 6.03 41.82 4.40
175 176 4.683781 GTGTTTTGACAAAGACAAAGTGCA 59.316 37.500 13.76 0.00 36.41 4.57
176 177 5.348451 GTGTTTTGACAAAGACAAAGTGCAT 59.652 36.000 13.76 0.00 36.41 3.96
177 178 5.576384 TGTTTTGACAAAGACAAAGTGCATC 59.424 36.000 11.19 0.00 38.25 3.91
178 179 3.607422 TGACAAAGACAAAGTGCATCG 57.393 42.857 0.00 0.00 0.00 3.84
179 180 3.202097 TGACAAAGACAAAGTGCATCGA 58.798 40.909 0.00 0.00 0.00 3.59
180 181 3.625313 TGACAAAGACAAAGTGCATCGAA 59.375 39.130 0.00 0.00 0.00 3.71
181 182 4.275689 TGACAAAGACAAAGTGCATCGAAT 59.724 37.500 0.00 0.00 0.00 3.34
182 183 4.539870 ACAAAGACAAAGTGCATCGAATG 58.460 39.130 0.00 0.00 0.00 2.67
183 184 3.837213 AAGACAAAGTGCATCGAATGG 57.163 42.857 0.00 0.00 0.00 3.16
184 185 2.783135 AGACAAAGTGCATCGAATGGT 58.217 42.857 0.00 0.00 0.00 3.55
185 186 3.149196 AGACAAAGTGCATCGAATGGTT 58.851 40.909 0.00 0.00 0.00 3.67
186 187 4.323417 AGACAAAGTGCATCGAATGGTTA 58.677 39.130 0.00 0.00 0.00 2.85
187 188 4.393062 AGACAAAGTGCATCGAATGGTTAG 59.607 41.667 0.00 0.00 0.00 2.34
188 189 4.323417 ACAAAGTGCATCGAATGGTTAGA 58.677 39.130 0.00 0.00 0.00 2.10
189 190 4.759693 ACAAAGTGCATCGAATGGTTAGAA 59.240 37.500 0.00 0.00 0.00 2.10
190 191 5.415701 ACAAAGTGCATCGAATGGTTAGAAT 59.584 36.000 0.00 0.00 0.00 2.40
191 192 5.741388 AAGTGCATCGAATGGTTAGAATC 57.259 39.130 0.00 0.00 0.00 2.52
192 193 4.769688 AGTGCATCGAATGGTTAGAATCA 58.230 39.130 0.00 0.00 0.00 2.57
193 194 5.185454 AGTGCATCGAATGGTTAGAATCAA 58.815 37.500 0.00 0.00 0.00 2.57
194 195 5.647658 AGTGCATCGAATGGTTAGAATCAAA 59.352 36.000 0.00 0.00 0.00 2.69
195 196 5.739161 GTGCATCGAATGGTTAGAATCAAAC 59.261 40.000 0.00 0.00 0.00 2.93
196 197 4.963953 GCATCGAATGGTTAGAATCAAACG 59.036 41.667 0.00 0.00 0.00 3.60
197 198 5.220586 GCATCGAATGGTTAGAATCAAACGA 60.221 40.000 8.87 8.87 36.04 3.85
198 199 6.674519 GCATCGAATGGTTAGAATCAAACGAA 60.675 38.462 9.97 0.00 35.56 3.85
199 200 6.978343 TCGAATGGTTAGAATCAAACGAAT 57.022 33.333 0.00 0.00 31.60 3.34
200 201 7.000575 TCGAATGGTTAGAATCAAACGAATC 57.999 36.000 0.00 0.00 31.60 2.52
201 202 5.896432 CGAATGGTTAGAATCAAACGAATCG 59.104 40.000 0.00 0.00 33.70 3.34
202 203 6.455113 CGAATGGTTAGAATCAAACGAATCGT 60.455 38.462 0.96 0.96 43.97 3.73
203 204 7.253850 CGAATGGTTAGAATCAAACGAATCGTA 60.254 37.037 9.30 0.00 39.99 3.43
204 205 6.636666 TGGTTAGAATCAAACGAATCGTAC 57.363 37.500 9.30 0.00 39.99 3.67
205 206 5.286797 TGGTTAGAATCAAACGAATCGTACG 59.713 40.000 9.30 9.53 39.99 3.67
206 207 5.276067 GGTTAGAATCAAACGAATCGTACGG 60.276 44.000 16.52 1.64 39.99 4.02
207 208 2.601763 AGAATCAAACGAATCGTACGGC 59.398 45.455 16.52 4.57 39.99 5.68
208 209 2.288961 ATCAAACGAATCGTACGGCT 57.711 45.000 16.52 2.17 39.99 5.52
209 210 1.342555 TCAAACGAATCGTACGGCTG 58.657 50.000 16.52 5.83 39.99 4.85
210 211 0.247145 CAAACGAATCGTACGGCTGC 60.247 55.000 16.52 0.85 39.99 5.25
211 212 1.680105 AAACGAATCGTACGGCTGCG 61.680 55.000 16.52 15.56 39.99 5.18
212 213 3.320078 CGAATCGTACGGCTGCGG 61.320 66.667 16.52 5.60 0.00 5.69
213 214 2.202703 GAATCGTACGGCTGCGGT 60.203 61.111 16.52 17.06 0.00 5.68
214 215 2.202703 AATCGTACGGCTGCGGTC 60.203 61.111 16.52 7.72 0.00 4.79
215 216 2.609183 GAATCGTACGGCTGCGGTCT 62.609 60.000 16.52 0.00 0.00 3.85
216 217 2.884087 AATCGTACGGCTGCGGTCTG 62.884 60.000 16.52 10.25 0.00 3.51
217 218 4.111016 CGTACGGCTGCGGTCTGA 62.111 66.667 16.40 0.00 0.00 3.27
218 219 2.506438 GTACGGCTGCGGTCTGAC 60.506 66.667 16.40 6.08 0.00 3.51
219 220 3.755628 TACGGCTGCGGTCTGACC 61.756 66.667 16.99 16.99 34.05 4.02
228 229 2.114411 GGTCTGACCGGCCCAAAA 59.886 61.111 11.71 0.00 0.00 2.44
229 230 1.304134 GGTCTGACCGGCCCAAAAT 60.304 57.895 11.71 0.00 0.00 1.82
230 231 0.898326 GGTCTGACCGGCCCAAAATT 60.898 55.000 11.71 0.00 0.00 1.82
231 232 1.614850 GGTCTGACCGGCCCAAAATTA 60.615 52.381 11.71 0.00 0.00 1.40
232 233 1.743394 GTCTGACCGGCCCAAAATTAG 59.257 52.381 0.00 0.00 0.00 1.73
233 234 1.102978 CTGACCGGCCCAAAATTAGG 58.897 55.000 0.00 0.00 0.00 2.69
238 239 4.027884 GCCCAAAATTAGGCCGGT 57.972 55.556 1.90 0.00 43.76 5.28
239 240 1.515487 GCCCAAAATTAGGCCGGTG 59.485 57.895 1.90 0.00 43.76 4.94
240 241 1.515487 CCCAAAATTAGGCCGGTGC 59.485 57.895 1.90 0.00 0.00 5.01
241 242 1.138671 CCAAAATTAGGCCGGTGCG 59.861 57.895 1.90 0.00 38.85 5.34
242 243 1.516169 CAAAATTAGGCCGGTGCGC 60.516 57.895 1.90 0.00 38.85 6.09
258 259 4.597215 GCCGGCGCCTATTACCGT 62.597 66.667 26.68 0.00 45.49 4.83
259 260 2.107546 CCGGCGCCTATTACCGTT 59.892 61.111 26.68 0.00 45.49 4.44
260 261 1.522130 CCGGCGCCTATTACCGTTT 60.522 57.895 26.68 0.00 45.49 3.60
261 262 0.249405 CCGGCGCCTATTACCGTTTA 60.249 55.000 26.68 0.00 45.49 2.01
262 263 1.569708 CGGCGCCTATTACCGTTTAA 58.430 50.000 26.68 0.00 42.01 1.52
263 264 2.137523 CGGCGCCTATTACCGTTTAAT 58.862 47.619 26.68 0.00 42.01 1.40
264 265 3.316283 CGGCGCCTATTACCGTTTAATA 58.684 45.455 26.68 0.00 42.01 0.98
265 266 3.365820 CGGCGCCTATTACCGTTTAATAG 59.634 47.826 26.68 11.55 42.01 1.73
266 267 4.309933 GGCGCCTATTACCGTTTAATAGT 58.690 43.478 22.15 0.00 36.35 2.12
267 268 5.469479 GGCGCCTATTACCGTTTAATAGTA 58.531 41.667 22.15 0.00 36.35 1.82
268 269 6.101997 GGCGCCTATTACCGTTTAATAGTAT 58.898 40.000 22.15 0.00 36.35 2.12
269 270 6.254373 GGCGCCTATTACCGTTTAATAGTATC 59.746 42.308 22.15 7.25 36.35 2.24
270 271 6.808212 GCGCCTATTACCGTTTAATAGTATCA 59.192 38.462 15.05 0.00 36.35 2.15
271 272 7.329226 GCGCCTATTACCGTTTAATAGTATCAA 59.671 37.037 15.05 0.00 36.35 2.57
272 273 8.642020 CGCCTATTACCGTTTAATAGTATCAAC 58.358 37.037 15.05 0.00 36.35 3.18
273 274 9.702494 GCCTATTACCGTTTAATAGTATCAACT 57.298 33.333 15.05 0.00 36.35 3.16
277 278 8.947055 TTACCGTTTAATAGTATCAACTTCCC 57.053 34.615 4.48 0.00 37.15 3.97
278 279 6.949715 ACCGTTTAATAGTATCAACTTCCCA 58.050 36.000 4.48 0.00 37.15 4.37
279 280 7.571025 ACCGTTTAATAGTATCAACTTCCCAT 58.429 34.615 4.48 0.00 37.15 4.00
280 281 8.050930 ACCGTTTAATAGTATCAACTTCCCATT 58.949 33.333 4.48 0.00 37.15 3.16
281 282 8.899771 CCGTTTAATAGTATCAACTTCCCATTT 58.100 33.333 4.48 0.00 37.15 2.32
293 294 9.712305 ATCAACTTCCCATTTAATAGTATCTCG 57.288 33.333 0.00 0.00 0.00 4.04
294 295 8.920174 TCAACTTCCCATTTAATAGTATCTCGA 58.080 33.333 0.00 0.00 0.00 4.04
295 296 9.542462 CAACTTCCCATTTAATAGTATCTCGAA 57.458 33.333 0.00 0.00 0.00 3.71
296 297 9.765795 AACTTCCCATTTAATAGTATCTCGAAG 57.234 33.333 0.00 0.00 0.00 3.79
297 298 9.144298 ACTTCCCATTTAATAGTATCTCGAAGA 57.856 33.333 0.00 0.00 0.00 2.87
339 340 9.768662 AGTAGTATAACTTCCGAAAACTCAAAA 57.231 29.630 0.00 0.00 0.00 2.44
340 341 9.803130 GTAGTATAACTTCCGAAAACTCAAAAC 57.197 33.333 0.00 0.00 0.00 2.43
341 342 7.570161 AGTATAACTTCCGAAAACTCAAAACG 58.430 34.615 0.00 0.00 0.00 3.60
342 343 3.685836 ACTTCCGAAAACTCAAAACGG 57.314 42.857 0.00 0.00 44.09 4.44
343 344 3.011818 ACTTCCGAAAACTCAAAACGGT 58.988 40.909 0.00 0.00 43.36 4.83
344 345 3.181504 ACTTCCGAAAACTCAAAACGGTG 60.182 43.478 0.00 0.00 43.36 4.94
345 346 1.064357 TCCGAAAACTCAAAACGGTGC 59.936 47.619 0.00 0.00 43.36 5.01
346 347 1.472990 CGAAAACTCAAAACGGTGCC 58.527 50.000 0.00 0.00 0.00 5.01
347 348 1.847818 GAAAACTCAAAACGGTGCCC 58.152 50.000 0.00 0.00 0.00 5.36
358 359 4.864334 GGTGCCCGGGCTCATCTG 62.864 72.222 43.34 6.35 42.51 2.90
361 362 4.925861 GCCCGGGCTCATCTGCTC 62.926 72.222 38.76 4.71 38.26 4.26
362 363 4.247380 CCCGGGCTCATCTGCTCC 62.247 72.222 8.08 0.00 0.00 4.70
363 364 4.247380 CCGGGCTCATCTGCTCCC 62.247 72.222 0.00 0.00 35.42 4.30
364 365 3.160047 CGGGCTCATCTGCTCCCT 61.160 66.667 0.00 0.00 36.61 4.20
365 366 2.828145 GGGCTCATCTGCTCCCTC 59.172 66.667 0.00 0.00 35.87 4.30
366 367 1.765657 GGGCTCATCTGCTCCCTCT 60.766 63.158 0.00 0.00 35.87 3.69
367 368 1.747774 GGCTCATCTGCTCCCTCTC 59.252 63.158 0.00 0.00 0.00 3.20
368 369 1.047596 GGCTCATCTGCTCCCTCTCA 61.048 60.000 0.00 0.00 0.00 3.27
369 370 0.390124 GCTCATCTGCTCCCTCTCAG 59.610 60.000 0.00 0.00 0.00 3.35
370 371 0.390124 CTCATCTGCTCCCTCTCAGC 59.610 60.000 0.00 0.00 37.40 4.26
371 372 0.325016 TCATCTGCTCCCTCTCAGCA 60.325 55.000 0.00 0.00 44.80 4.41
372 373 0.540454 CATCTGCTCCCTCTCAGCAA 59.460 55.000 0.00 0.00 46.22 3.91
373 374 1.065636 CATCTGCTCCCTCTCAGCAAA 60.066 52.381 0.00 0.00 46.22 3.68
374 375 1.059098 TCTGCTCCCTCTCAGCAAAA 58.941 50.000 0.00 0.00 46.22 2.44
375 376 1.421268 TCTGCTCCCTCTCAGCAAAAA 59.579 47.619 0.00 0.00 46.22 1.94
443 444 5.994887 TGTGGTGGTATATAATTTGACGC 57.005 39.130 0.00 0.00 0.00 5.19
444 445 4.508492 TGTGGTGGTATATAATTTGACGCG 59.492 41.667 3.53 3.53 0.00 6.01
445 446 4.508861 GTGGTGGTATATAATTTGACGCGT 59.491 41.667 13.85 13.85 0.00 6.01
446 447 4.508492 TGGTGGTATATAATTTGACGCGTG 59.492 41.667 20.70 0.00 0.00 5.34
447 448 4.746115 GGTGGTATATAATTTGACGCGTGA 59.254 41.667 20.70 4.74 0.00 4.35
448 449 5.107607 GGTGGTATATAATTTGACGCGTGAG 60.108 44.000 20.70 0.00 0.00 3.51
449 450 4.986034 TGGTATATAATTTGACGCGTGAGG 59.014 41.667 20.70 0.00 0.00 3.86
450 451 4.986659 GGTATATAATTTGACGCGTGAGGT 59.013 41.667 20.70 0.00 0.00 3.85
451 452 5.107607 GGTATATAATTTGACGCGTGAGGTG 60.108 44.000 20.70 0.00 0.00 4.00
452 453 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
468 469 3.751518 AGGTGCGTCCTAAAATTCAACT 58.248 40.909 0.00 0.00 46.10 3.16
469 470 3.751698 AGGTGCGTCCTAAAATTCAACTC 59.248 43.478 0.00 0.00 46.10 3.01
470 471 3.500680 GGTGCGTCCTAAAATTCAACTCA 59.499 43.478 0.00 0.00 0.00 3.41
471 472 4.156008 GGTGCGTCCTAAAATTCAACTCAT 59.844 41.667 0.00 0.00 0.00 2.90
472 473 5.335661 GGTGCGTCCTAAAATTCAACTCATT 60.336 40.000 0.00 0.00 0.00 2.57
473 474 6.149633 GTGCGTCCTAAAATTCAACTCATTT 58.850 36.000 0.00 0.00 0.00 2.32
474 475 6.088085 GTGCGTCCTAAAATTCAACTCATTTG 59.912 38.462 0.00 0.00 36.42 2.32
475 476 5.572896 GCGTCCTAAAATTCAACTCATTTGG 59.427 40.000 0.00 0.00 35.69 3.28
476 477 6.569610 GCGTCCTAAAATTCAACTCATTTGGA 60.570 38.462 0.00 0.00 35.69 3.53
477 478 6.801862 CGTCCTAAAATTCAACTCATTTGGAC 59.198 38.462 0.00 0.00 35.69 4.02
478 479 7.521423 CGTCCTAAAATTCAACTCATTTGGACA 60.521 37.037 14.48 0.00 35.30 4.02
479 480 8.306761 GTCCTAAAATTCAACTCATTTGGACAT 58.693 33.333 10.93 0.00 35.46 3.06
480 481 8.522830 TCCTAAAATTCAACTCATTTGGACATC 58.477 33.333 0.00 0.00 35.69 3.06
481 482 8.526147 CCTAAAATTCAACTCATTTGGACATCT 58.474 33.333 0.00 0.00 35.69 2.90
482 483 9.350357 CTAAAATTCAACTCATTTGGACATCTG 57.650 33.333 0.00 0.00 35.69 2.90
483 484 7.528996 AAATTCAACTCATTTGGACATCTGA 57.471 32.000 0.00 0.00 35.69 3.27
484 485 6.754702 ATTCAACTCATTTGGACATCTGAG 57.245 37.500 9.00 9.00 40.71 3.35
485 486 4.005650 TCAACTCATTTGGACATCTGAGC 58.994 43.478 10.00 0.00 38.94 4.26
486 487 3.708403 ACTCATTTGGACATCTGAGCA 57.292 42.857 10.00 0.00 38.94 4.26
487 488 3.607741 ACTCATTTGGACATCTGAGCAG 58.392 45.455 10.00 0.00 38.94 4.24
488 489 2.355132 CTCATTTGGACATCTGAGCAGC 59.645 50.000 0.00 0.00 0.00 5.25
489 490 2.026542 TCATTTGGACATCTGAGCAGCT 60.027 45.455 0.00 0.00 0.00 4.24
490 491 2.105006 TTTGGACATCTGAGCAGCTC 57.895 50.000 16.21 16.21 0.00 4.09
491 492 1.273759 TTGGACATCTGAGCAGCTCT 58.726 50.000 23.15 2.04 0.00 4.09
492 493 0.822811 TGGACATCTGAGCAGCTCTC 59.177 55.000 23.15 11.57 42.23 3.20
493 494 0.248990 GGACATCTGAGCAGCTCTCG 60.249 60.000 23.15 13.93 44.86 4.04
495 496 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
496 497 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
497 498 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
498 499 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
499 500 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
500 501 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
524 525 7.647907 AAGACAAATCAGATCAAAACAATGC 57.352 32.000 0.00 0.00 0.00 3.56
525 526 5.860182 AGACAAATCAGATCAAAACAATGCG 59.140 36.000 0.00 0.00 0.00 4.73
526 527 5.531634 ACAAATCAGATCAAAACAATGCGT 58.468 33.333 0.00 0.00 0.00 5.24
527 528 5.403166 ACAAATCAGATCAAAACAATGCGTG 59.597 36.000 0.00 0.00 0.00 5.34
528 529 5.375417 AATCAGATCAAAACAATGCGTGA 57.625 34.783 0.00 0.00 0.00 4.35
529 530 4.827304 TCAGATCAAAACAATGCGTGAA 57.173 36.364 0.00 0.00 0.00 3.18
530 531 4.536065 TCAGATCAAAACAATGCGTGAAC 58.464 39.130 0.00 0.00 0.00 3.18
531 532 4.036144 TCAGATCAAAACAATGCGTGAACA 59.964 37.500 0.00 0.00 0.00 3.18
532 533 4.380678 CAGATCAAAACAATGCGTGAACAG 59.619 41.667 0.00 0.00 0.00 3.16
533 534 3.773860 TCAAAACAATGCGTGAACAGT 57.226 38.095 0.00 0.00 0.00 3.55
534 535 4.884458 TCAAAACAATGCGTGAACAGTA 57.116 36.364 0.00 0.00 0.00 2.74
535 536 5.431420 TCAAAACAATGCGTGAACAGTAT 57.569 34.783 0.00 0.00 0.00 2.12
536 537 6.546972 TCAAAACAATGCGTGAACAGTATA 57.453 33.333 0.00 0.00 0.00 1.47
537 538 6.367421 TCAAAACAATGCGTGAACAGTATAC 58.633 36.000 0.00 0.00 0.00 1.47
538 539 5.933187 AAACAATGCGTGAACAGTATACA 57.067 34.783 5.50 0.00 0.00 2.29
539 540 6.494893 AAACAATGCGTGAACAGTATACAT 57.505 33.333 5.50 0.00 0.00 2.29
540 541 6.494893 AACAATGCGTGAACAGTATACATT 57.505 33.333 5.50 0.00 0.00 2.71
541 542 6.494893 ACAATGCGTGAACAGTATACATTT 57.505 33.333 5.50 0.00 0.00 2.32
542 543 6.908825 ACAATGCGTGAACAGTATACATTTT 58.091 32.000 5.50 0.00 0.00 1.82
543 544 7.367285 ACAATGCGTGAACAGTATACATTTTT 58.633 30.769 5.50 0.00 0.00 1.94
544 545 8.508062 ACAATGCGTGAACAGTATACATTTTTA 58.492 29.630 5.50 0.00 0.00 1.52
545 546 8.785101 CAATGCGTGAACAGTATACATTTTTAC 58.215 33.333 5.50 1.57 0.00 2.01
546 547 7.422878 TGCGTGAACAGTATACATTTTTACA 57.577 32.000 5.50 0.00 0.00 2.41
547 548 7.514805 TGCGTGAACAGTATACATTTTTACAG 58.485 34.615 5.50 1.34 0.00 2.74
548 549 7.385478 TGCGTGAACAGTATACATTTTTACAGA 59.615 33.333 5.50 0.00 0.00 3.41
549 550 7.686938 GCGTGAACAGTATACATTTTTACAGAC 59.313 37.037 5.50 0.00 0.00 3.51
550 551 8.166706 CGTGAACAGTATACATTTTTACAGACC 58.833 37.037 5.50 0.00 0.00 3.85
551 552 8.448615 GTGAACAGTATACATTTTTACAGACCC 58.551 37.037 5.50 0.00 0.00 4.46
552 553 8.380099 TGAACAGTATACATTTTTACAGACCCT 58.620 33.333 5.50 0.00 0.00 4.34
553 554 8.561738 AACAGTATACATTTTTACAGACCCTG 57.438 34.615 5.50 0.00 37.52 4.45
554 555 7.913789 ACAGTATACATTTTTACAGACCCTGA 58.086 34.615 5.50 0.00 35.18 3.86
555 556 8.548877 ACAGTATACATTTTTACAGACCCTGAT 58.451 33.333 5.50 0.00 35.18 2.90
556 557 9.396022 CAGTATACATTTTTACAGACCCTGATT 57.604 33.333 5.50 0.00 35.18 2.57
557 558 9.975218 AGTATACATTTTTACAGACCCTGATTT 57.025 29.630 5.50 0.00 35.18 2.17
560 561 7.360113 ACATTTTTACAGACCCTGATTTTGT 57.640 32.000 0.45 0.00 35.18 2.83
561 562 7.433680 ACATTTTTACAGACCCTGATTTTGTC 58.566 34.615 0.45 0.00 35.18 3.18
562 563 7.287696 ACATTTTTACAGACCCTGATTTTGTCT 59.712 33.333 0.45 0.00 39.86 3.41
563 564 7.654022 TTTTTACAGACCCTGATTTTGTCTT 57.346 32.000 0.45 0.00 37.25 3.01
564 565 7.654022 TTTTACAGACCCTGATTTTGTCTTT 57.346 32.000 0.45 0.00 37.25 2.52
565 566 7.654022 TTTACAGACCCTGATTTTGTCTTTT 57.346 32.000 0.45 0.00 37.25 2.27
566 567 7.654022 TTACAGACCCTGATTTTGTCTTTTT 57.346 32.000 0.45 0.00 37.25 1.94
580 581 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
581 582 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
582 583 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
583 584 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
584 585 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
585 586 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
586 587 0.753111 TGCCGAGAGCTGCTCAGATA 60.753 55.000 29.49 12.91 44.15 1.98
587 588 0.039256 GCCGAGAGCTGCTCAGATAG 60.039 60.000 29.49 14.80 44.15 2.08
588 589 1.317613 CCGAGAGCTGCTCAGATAGT 58.682 55.000 29.49 9.44 44.15 2.12
589 590 1.266718 CCGAGAGCTGCTCAGATAGTC 59.733 57.143 29.49 16.52 44.15 2.59
590 591 1.946081 CGAGAGCTGCTCAGATAGTCA 59.054 52.381 29.49 0.00 44.15 3.41
591 592 2.357323 CGAGAGCTGCTCAGATAGTCAA 59.643 50.000 29.49 0.00 44.15 3.18
592 593 3.181492 CGAGAGCTGCTCAGATAGTCAAA 60.181 47.826 29.49 0.00 44.15 2.69
593 594 4.499526 CGAGAGCTGCTCAGATAGTCAAAT 60.500 45.833 29.49 5.90 44.15 2.32
594 595 4.695396 AGAGCTGCTCAGATAGTCAAATG 58.305 43.478 29.49 0.00 32.06 2.32
595 596 4.405036 AGAGCTGCTCAGATAGTCAAATGA 59.595 41.667 29.49 0.00 32.06 2.57
596 597 4.695396 AGCTGCTCAGATAGTCAAATGAG 58.305 43.478 0.00 0.00 41.68 2.90
597 598 4.161942 AGCTGCTCAGATAGTCAAATGAGT 59.838 41.667 0.00 0.00 41.00 3.41
598 599 4.874966 GCTGCTCAGATAGTCAAATGAGTT 59.125 41.667 0.29 0.00 41.00 3.01
599 600 5.220624 GCTGCTCAGATAGTCAAATGAGTTG 60.221 44.000 0.29 0.00 41.00 3.16
600 601 6.041423 TGCTCAGATAGTCAAATGAGTTGA 57.959 37.500 0.00 0.00 44.20 3.18
610 611 4.640364 TCAAATGAGTTGAATTTTGGGGC 58.360 39.130 0.00 0.00 43.43 5.80
611 612 3.317603 AATGAGTTGAATTTTGGGGCG 57.682 42.857 0.00 0.00 0.00 6.13
612 613 0.316841 TGAGTTGAATTTTGGGGCGC 59.683 50.000 0.00 0.00 0.00 6.53
613 614 0.316841 GAGTTGAATTTTGGGGCGCA 59.683 50.000 10.83 0.00 0.00 6.09
614 615 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.000 10.83 4.83 0.00 5.34
615 616 0.948623 GTTGAATTTTGGGGCGCACC 60.949 55.000 25.59 25.59 39.11 5.01
616 617 1.118356 TTGAATTTTGGGGCGCACCT 61.118 50.000 32.18 9.19 40.03 4.00
617 618 1.215382 GAATTTTGGGGCGCACCTC 59.785 57.895 32.18 15.41 40.03 3.85
628 629 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
629 630 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
630 631 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
631 632 1.396996 GCACCTCACGCGTCAAATTAT 59.603 47.619 9.86 0.00 0.00 1.28
632 633 2.536928 GCACCTCACGCGTCAAATTATC 60.537 50.000 9.86 0.00 0.00 1.75
633 634 2.930040 CACCTCACGCGTCAAATTATCT 59.070 45.455 9.86 0.00 0.00 1.98
634 635 4.109766 CACCTCACGCGTCAAATTATCTA 58.890 43.478 9.86 0.00 0.00 1.98
635 636 4.026804 CACCTCACGCGTCAAATTATCTAC 60.027 45.833 9.86 0.00 0.00 2.59
636 637 3.489785 CCTCACGCGTCAAATTATCTACC 59.510 47.826 9.86 0.00 0.00 3.18
637 638 4.109766 CTCACGCGTCAAATTATCTACCA 58.890 43.478 9.86 0.00 0.00 3.25
638 639 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
639 640 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
640 641 3.191669 CGCGTCAAATTATCTACCACCA 58.808 45.455 0.00 0.00 0.00 4.17
641 642 3.000925 CGCGTCAAATTATCTACCACCAC 59.999 47.826 0.00 0.00 0.00 4.16
642 643 3.936453 GCGTCAAATTATCTACCACCACA 59.064 43.478 0.00 0.00 0.00 4.17
643 644 4.393680 GCGTCAAATTATCTACCACCACAA 59.606 41.667 0.00 0.00 0.00 3.33
644 645 5.106475 GCGTCAAATTATCTACCACCACAAA 60.106 40.000 0.00 0.00 0.00 2.83
645 646 6.568844 GCGTCAAATTATCTACCACCACAAAA 60.569 38.462 0.00 0.00 0.00 2.44
646 647 7.021196 CGTCAAATTATCTACCACCACAAAAG 58.979 38.462 0.00 0.00 0.00 2.27
647 648 7.094975 CGTCAAATTATCTACCACCACAAAAGA 60.095 37.037 0.00 0.00 0.00 2.52
648 649 8.573035 GTCAAATTATCTACCACCACAAAAGAA 58.427 33.333 0.00 0.00 0.00 2.52
649 650 9.137459 TCAAATTATCTACCACCACAAAAGAAA 57.863 29.630 0.00 0.00 0.00 2.52
650 651 9.927668 CAAATTATCTACCACCACAAAAGAAAT 57.072 29.630 0.00 0.00 0.00 2.17
652 653 9.927668 AATTATCTACCACCACAAAAGAAATTG 57.072 29.630 0.00 0.00 36.37 2.32
653 654 5.782893 TCTACCACCACAAAAGAAATTGG 57.217 39.130 0.00 0.00 34.56 3.16
654 655 5.450453 TCTACCACCACAAAAGAAATTGGA 58.550 37.500 0.00 0.00 34.56 3.53
655 656 5.894393 TCTACCACCACAAAAGAAATTGGAA 59.106 36.000 0.00 0.00 34.56 3.53
656 657 5.628797 ACCACCACAAAAGAAATTGGAAT 57.371 34.783 0.00 0.00 34.56 3.01
657 658 6.000246 ACCACCACAAAAGAAATTGGAATT 58.000 33.333 0.00 0.00 34.56 2.17
658 659 6.422333 ACCACCACAAAAGAAATTGGAATTT 58.578 32.000 0.00 0.00 41.06 1.82
659 660 6.889177 ACCACCACAAAAGAAATTGGAATTTT 59.111 30.769 0.00 0.00 38.64 1.82
660 661 7.395772 ACCACCACAAAAGAAATTGGAATTTTT 59.604 29.630 0.00 0.00 38.64 1.94
712 713 3.634568 TTTTAAACGTGGGTGCAGATG 57.365 42.857 0.00 0.00 0.00 2.90
713 714 2.552599 TTAAACGTGGGTGCAGATGA 57.447 45.000 0.00 0.00 0.00 2.92
714 715 2.093306 TAAACGTGGGTGCAGATGAG 57.907 50.000 0.00 0.00 0.00 2.90
715 716 1.237285 AAACGTGGGTGCAGATGAGC 61.237 55.000 0.00 0.00 0.00 4.26
716 717 2.821366 CGTGGGTGCAGATGAGCC 60.821 66.667 0.00 0.00 0.00 4.70
717 718 2.439156 GTGGGTGCAGATGAGCCC 60.439 66.667 0.81 0.81 41.42 5.19
718 719 4.100084 TGGGTGCAGATGAGCCCG 62.100 66.667 3.57 0.00 43.89 6.13
719 720 4.864334 GGGTGCAGATGAGCCCGG 62.864 72.222 0.00 0.00 0.00 5.73
720 721 3.785859 GGTGCAGATGAGCCCGGA 61.786 66.667 0.73 0.00 0.00 5.14
721 722 2.507944 GTGCAGATGAGCCCGGAT 59.492 61.111 0.73 0.00 0.00 4.18
722 723 1.890979 GTGCAGATGAGCCCGGATG 60.891 63.158 0.73 0.00 0.00 3.51
723 724 2.976903 GCAGATGAGCCCGGATGC 60.977 66.667 0.73 0.00 0.00 3.91
724 725 2.507452 CAGATGAGCCCGGATGCA 59.493 61.111 0.73 0.00 0.00 3.96
725 726 1.597302 CAGATGAGCCCGGATGCAG 60.597 63.158 0.73 0.00 0.00 4.41
726 727 1.763655 AGATGAGCCCGGATGCAGA 60.764 57.895 0.73 0.00 0.00 4.26
727 728 1.126329 AGATGAGCCCGGATGCAGAT 61.126 55.000 0.73 0.00 0.00 2.90
728 729 0.250640 GATGAGCCCGGATGCAGATT 60.251 55.000 0.73 0.00 0.00 2.40
729 730 1.002430 GATGAGCCCGGATGCAGATTA 59.998 52.381 0.73 0.00 0.00 1.75
730 731 0.394192 TGAGCCCGGATGCAGATTAG 59.606 55.000 0.73 0.00 0.00 1.73
731 732 0.952984 GAGCCCGGATGCAGATTAGC 60.953 60.000 0.73 0.00 0.00 3.09
732 733 1.968540 GCCCGGATGCAGATTAGCC 60.969 63.158 0.73 0.00 0.00 3.93
733 734 1.669115 CCCGGATGCAGATTAGCCG 60.669 63.158 0.73 0.00 45.96 5.52
734 735 2.320587 CCGGATGCAGATTAGCCGC 61.321 63.158 0.00 0.00 45.11 6.53
735 736 1.595109 CGGATGCAGATTAGCCGCA 60.595 57.895 0.00 0.00 40.42 5.69
736 737 1.835483 CGGATGCAGATTAGCCGCAC 61.835 60.000 0.00 0.00 40.42 5.34
737 738 0.533755 GGATGCAGATTAGCCGCACT 60.534 55.000 0.00 0.00 38.73 4.40
738 739 0.864455 GATGCAGATTAGCCGCACTC 59.136 55.000 0.00 0.00 38.73 3.51
739 740 0.467384 ATGCAGATTAGCCGCACTCT 59.533 50.000 0.00 0.00 38.73 3.24
740 741 0.460811 TGCAGATTAGCCGCACTCTG 60.461 55.000 10.77 10.77 38.49 3.35
758 759 6.102663 CACTCTGTAACTTCCCACTATTCTG 58.897 44.000 0.00 0.00 0.00 3.02
809 813 1.969064 TTCCGACATTTGGCCCACG 60.969 57.895 0.00 0.00 0.00 4.94
1194 1228 4.175489 CGCGACATCGTCTCCCGT 62.175 66.667 0.00 0.00 42.22 5.28
1200 1234 1.454111 CATCGTCTCCCGTCTCCCT 60.454 63.158 0.00 0.00 37.94 4.20
1479 1526 2.974489 GCTCGTCCTCGTCAACCGA 61.974 63.158 0.00 0.00 45.00 4.69
1729 1776 4.554036 GGGTGCATCTCCGCCTCC 62.554 72.222 0.00 0.00 35.70 4.30
2147 5440 1.664659 CTTCGGAGTCTACGACGATGT 59.335 52.381 6.69 0.00 40.45 3.06
2148 5441 1.284657 TCGGAGTCTACGACGATGTC 58.715 55.000 2.07 0.00 37.67 3.06
2149 5442 1.004595 CGGAGTCTACGACGATGTCA 58.995 55.000 0.00 0.00 37.67 3.58
2222 5524 2.884894 ATTACGGTACTAGCACTGGC 57.115 50.000 6.87 0.00 41.61 4.85
2244 5578 0.813184 CCTCATGTTGATGGTGCACC 59.187 55.000 29.67 29.67 0.00 5.01
2277 5618 6.071952 ACCTGCTGAAATGTTGACGAAATTAT 60.072 34.615 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.309682 CGTCACCGATTGTAGCATCAAAT 59.690 43.478 0.00 0.00 35.63 2.32
1 2 2.670905 CGTCACCGATTGTAGCATCAAA 59.329 45.455 0.00 0.00 35.63 2.69
2 3 2.094442 TCGTCACCGATTGTAGCATCAA 60.094 45.455 0.00 0.00 38.40 2.57
3 4 1.474879 TCGTCACCGATTGTAGCATCA 59.525 47.619 0.00 0.00 38.40 3.07
4 5 2.120232 CTCGTCACCGATTGTAGCATC 58.880 52.381 0.00 0.00 43.27 3.91
5 6 1.202417 CCTCGTCACCGATTGTAGCAT 60.202 52.381 0.00 0.00 43.27 3.79
6 7 0.172578 CCTCGTCACCGATTGTAGCA 59.827 55.000 0.00 0.00 43.27 3.49
7 8 0.454600 TCCTCGTCACCGATTGTAGC 59.545 55.000 0.00 0.00 43.27 3.58
8 9 1.531264 CGTCCTCGTCACCGATTGTAG 60.531 57.143 0.00 0.00 43.27 2.74
9 10 0.448990 CGTCCTCGTCACCGATTGTA 59.551 55.000 0.00 0.00 43.27 2.41
10 11 1.211969 CGTCCTCGTCACCGATTGT 59.788 57.895 0.00 0.00 43.27 2.71
11 12 1.516386 CCGTCCTCGTCACCGATTG 60.516 63.158 0.00 0.00 43.27 2.67
12 13 2.882876 CCGTCCTCGTCACCGATT 59.117 61.111 0.00 0.00 43.27 3.34
13 14 3.823330 GCCGTCCTCGTCACCGAT 61.823 66.667 0.00 0.00 43.27 4.18
31 32 4.697756 TGGCCTTCAACCTCGCCG 62.698 66.667 3.32 0.00 44.71 6.46
32 33 2.747855 CTGGCCTTCAACCTCGCC 60.748 66.667 3.32 0.00 41.99 5.54
33 34 3.435186 GCTGGCCTTCAACCTCGC 61.435 66.667 3.32 0.00 0.00 5.03
34 35 3.121030 CGCTGGCCTTCAACCTCG 61.121 66.667 3.32 0.00 0.00 4.63
35 36 1.743252 CTCGCTGGCCTTCAACCTC 60.743 63.158 3.32 0.00 0.00 3.85
36 37 2.348998 CTCGCTGGCCTTCAACCT 59.651 61.111 3.32 0.00 0.00 3.50
37 38 2.747855 CCTCGCTGGCCTTCAACC 60.748 66.667 3.32 0.00 0.00 3.77
38 39 2.747855 CCCTCGCTGGCCTTCAAC 60.748 66.667 3.32 0.00 0.00 3.18
39 40 4.722700 GCCCTCGCTGGCCTTCAA 62.723 66.667 3.32 0.00 46.11 2.69
77 78 4.521062 ATGCTCTCGGGTCGCTGC 62.521 66.667 1.44 0.00 0.00 5.25
78 79 2.584418 CATGCTCTCGGGTCGCTG 60.584 66.667 1.44 0.00 0.00 5.18
79 80 3.071206 ACATGCTCTCGGGTCGCT 61.071 61.111 0.00 0.00 0.00 4.93
80 81 2.887568 CACATGCTCTCGGGTCGC 60.888 66.667 0.00 0.00 0.00 5.19
81 82 2.887568 GCACATGCTCTCGGGTCG 60.888 66.667 0.00 0.00 38.21 4.79
82 83 2.887568 CGCACATGCTCTCGGGTC 60.888 66.667 1.82 0.00 39.32 4.46
83 84 4.457496 CCGCACATGCTCTCGGGT 62.457 66.667 1.82 0.00 38.35 5.28
102 103 4.521062 CTCTCTTCCGCCTGGCCG 62.521 72.222 14.12 6.93 34.14 6.13
103 104 4.847444 GCTCTCTTCCGCCTGGCC 62.847 72.222 14.12 0.00 34.14 5.36
105 106 3.452786 TCGCTCTCTTCCGCCTGG 61.453 66.667 0.00 0.00 0.00 4.45
106 107 2.202676 GTCGCTCTCTTCCGCCTG 60.203 66.667 0.00 0.00 0.00 4.85
107 108 3.816524 CGTCGCTCTCTTCCGCCT 61.817 66.667 0.00 0.00 0.00 5.52
108 109 3.743091 CTCGTCGCTCTCTTCCGCC 62.743 68.421 0.00 0.00 0.00 6.13
109 110 2.054140 ATCTCGTCGCTCTCTTCCGC 62.054 60.000 0.00 0.00 0.00 5.54
110 111 0.316607 CATCTCGTCGCTCTCTTCCG 60.317 60.000 0.00 0.00 0.00 4.30
111 112 1.018148 TCATCTCGTCGCTCTCTTCC 58.982 55.000 0.00 0.00 0.00 3.46
112 113 2.540769 CCTTCATCTCGTCGCTCTCTTC 60.541 54.545 0.00 0.00 0.00 2.87
113 114 1.403679 CCTTCATCTCGTCGCTCTCTT 59.596 52.381 0.00 0.00 0.00 2.85
114 115 1.021202 CCTTCATCTCGTCGCTCTCT 58.979 55.000 0.00 0.00 0.00 3.10
115 116 0.030101 CCCTTCATCTCGTCGCTCTC 59.970 60.000 0.00 0.00 0.00 3.20
116 117 0.394488 TCCCTTCATCTCGTCGCTCT 60.394 55.000 0.00 0.00 0.00 4.09
117 118 0.456221 TTCCCTTCATCTCGTCGCTC 59.544 55.000 0.00 0.00 0.00 5.03
118 119 1.067821 GATTCCCTTCATCTCGTCGCT 59.932 52.381 0.00 0.00 0.00 4.93
119 120 1.067821 AGATTCCCTTCATCTCGTCGC 59.932 52.381 0.00 0.00 0.00 5.19
120 121 3.444703 AAGATTCCCTTCATCTCGTCG 57.555 47.619 0.00 0.00 30.19 5.12
121 122 5.412904 ACAAAAAGATTCCCTTCATCTCGTC 59.587 40.000 0.00 0.00 33.02 4.20
122 123 5.316987 ACAAAAAGATTCCCTTCATCTCGT 58.683 37.500 0.00 0.00 33.02 4.18
123 124 5.886960 ACAAAAAGATTCCCTTCATCTCG 57.113 39.130 0.00 0.00 33.02 4.04
124 125 6.183360 CCGTACAAAAAGATTCCCTTCATCTC 60.183 42.308 0.00 0.00 33.02 2.75
125 126 5.648092 CCGTACAAAAAGATTCCCTTCATCT 59.352 40.000 0.00 0.00 33.02 2.90
126 127 5.163652 CCCGTACAAAAAGATTCCCTTCATC 60.164 44.000 0.00 0.00 33.02 2.92
127 128 4.705023 CCCGTACAAAAAGATTCCCTTCAT 59.295 41.667 0.00 0.00 33.02 2.57
128 129 4.076394 CCCGTACAAAAAGATTCCCTTCA 58.924 43.478 0.00 0.00 33.02 3.02
129 130 4.077108 ACCCGTACAAAAAGATTCCCTTC 58.923 43.478 0.00 0.00 33.02 3.46
130 131 3.824443 CACCCGTACAAAAAGATTCCCTT 59.176 43.478 0.00 0.00 36.47 3.95
131 132 3.181437 ACACCCGTACAAAAAGATTCCCT 60.181 43.478 0.00 0.00 0.00 4.20
132 133 3.057806 CACACCCGTACAAAAAGATTCCC 60.058 47.826 0.00 0.00 0.00 3.97
133 134 3.566742 ACACACCCGTACAAAAAGATTCC 59.433 43.478 0.00 0.00 0.00 3.01
134 135 4.823790 ACACACCCGTACAAAAAGATTC 57.176 40.909 0.00 0.00 0.00 2.52
135 136 5.585820 AAACACACCCGTACAAAAAGATT 57.414 34.783 0.00 0.00 0.00 2.40
136 137 5.125739 TCAAAACACACCCGTACAAAAAGAT 59.874 36.000 0.00 0.00 0.00 2.40
137 138 4.458295 TCAAAACACACCCGTACAAAAAGA 59.542 37.500 0.00 0.00 0.00 2.52
138 139 4.559643 GTCAAAACACACCCGTACAAAAAG 59.440 41.667 0.00 0.00 0.00 2.27
139 140 4.022589 TGTCAAAACACACCCGTACAAAAA 60.023 37.500 0.00 0.00 0.00 1.94
140 141 3.504906 TGTCAAAACACACCCGTACAAAA 59.495 39.130 0.00 0.00 0.00 2.44
141 142 3.079578 TGTCAAAACACACCCGTACAAA 58.920 40.909 0.00 0.00 0.00 2.83
142 143 2.708051 TGTCAAAACACACCCGTACAA 58.292 42.857 0.00 0.00 0.00 2.41
143 144 2.398252 TGTCAAAACACACCCGTACA 57.602 45.000 0.00 0.00 0.00 2.90
144 145 3.374678 TCTTTGTCAAAACACACCCGTAC 59.625 43.478 0.00 0.00 34.35 3.67
145 146 3.374678 GTCTTTGTCAAAACACACCCGTA 59.625 43.478 0.00 0.00 34.35 4.02
146 147 2.162809 GTCTTTGTCAAAACACACCCGT 59.837 45.455 0.00 0.00 34.35 5.28
147 148 2.162608 TGTCTTTGTCAAAACACACCCG 59.837 45.455 0.00 0.00 34.35 5.28
148 149 3.859411 TGTCTTTGTCAAAACACACCC 57.141 42.857 0.00 0.00 34.35 4.61
149 150 5.118510 CACTTTGTCTTTGTCAAAACACACC 59.881 40.000 8.59 0.00 34.35 4.16
150 151 5.388371 GCACTTTGTCTTTGTCAAAACACAC 60.388 40.000 8.59 1.15 34.35 3.82
151 152 4.683781 GCACTTTGTCTTTGTCAAAACACA 59.316 37.500 10.78 8.48 34.35 3.72
152 153 4.683781 TGCACTTTGTCTTTGTCAAAACAC 59.316 37.500 10.78 6.51 34.35 3.32
153 154 4.876125 TGCACTTTGTCTTTGTCAAAACA 58.124 34.783 0.00 4.70 34.96 2.83
154 155 5.275881 CGATGCACTTTGTCTTTGTCAAAAC 60.276 40.000 0.00 2.32 34.96 2.43
155 156 4.797868 CGATGCACTTTGTCTTTGTCAAAA 59.202 37.500 0.00 0.00 34.96 2.44
156 157 4.095632 TCGATGCACTTTGTCTTTGTCAAA 59.904 37.500 0.00 0.00 34.34 2.69
157 158 3.625313 TCGATGCACTTTGTCTTTGTCAA 59.375 39.130 0.00 0.00 0.00 3.18
158 159 3.202097 TCGATGCACTTTGTCTTTGTCA 58.798 40.909 0.00 0.00 0.00 3.58
159 160 3.878086 TCGATGCACTTTGTCTTTGTC 57.122 42.857 0.00 0.00 0.00 3.18
160 161 4.539870 CATTCGATGCACTTTGTCTTTGT 58.460 39.130 0.00 0.00 0.00 2.83
161 162 3.916172 CCATTCGATGCACTTTGTCTTTG 59.084 43.478 0.00 0.00 0.00 2.77
162 163 3.569701 ACCATTCGATGCACTTTGTCTTT 59.430 39.130 0.00 0.00 0.00 2.52
163 164 3.149196 ACCATTCGATGCACTTTGTCTT 58.851 40.909 0.00 0.00 0.00 3.01
164 165 2.783135 ACCATTCGATGCACTTTGTCT 58.217 42.857 0.00 0.00 0.00 3.41
165 166 3.559238 AACCATTCGATGCACTTTGTC 57.441 42.857 0.00 0.00 0.00 3.18
166 167 4.323417 TCTAACCATTCGATGCACTTTGT 58.677 39.130 0.00 0.00 0.00 2.83
167 168 4.944962 TCTAACCATTCGATGCACTTTG 57.055 40.909 0.00 0.00 0.00 2.77
168 169 5.647658 TGATTCTAACCATTCGATGCACTTT 59.352 36.000 0.00 0.00 0.00 2.66
169 170 5.185454 TGATTCTAACCATTCGATGCACTT 58.815 37.500 0.00 0.00 0.00 3.16
170 171 4.769688 TGATTCTAACCATTCGATGCACT 58.230 39.130 0.00 0.00 0.00 4.40
171 172 5.484173 TTGATTCTAACCATTCGATGCAC 57.516 39.130 0.00 0.00 0.00 4.57
172 173 5.447144 CGTTTGATTCTAACCATTCGATGCA 60.447 40.000 5.58 0.00 0.00 3.96
173 174 4.963953 CGTTTGATTCTAACCATTCGATGC 59.036 41.667 5.58 0.00 0.00 3.91
174 175 6.344572 TCGTTTGATTCTAACCATTCGATG 57.655 37.500 5.58 0.00 0.00 3.84
175 176 6.978343 TTCGTTTGATTCTAACCATTCGAT 57.022 33.333 5.58 0.00 0.00 3.59
176 177 6.237728 CGATTCGTTTGATTCTAACCATTCGA 60.238 38.462 13.19 3.13 0.00 3.71
177 178 5.896432 CGATTCGTTTGATTCTAACCATTCG 59.104 40.000 5.58 6.86 0.00 3.34
178 179 6.772078 ACGATTCGTTTGATTCTAACCATTC 58.228 36.000 5.75 0.00 36.35 2.67
179 180 6.737254 ACGATTCGTTTGATTCTAACCATT 57.263 33.333 5.75 0.00 36.35 3.16
180 181 6.020121 CGTACGATTCGTTTGATTCTAACCAT 60.020 38.462 17.93 0.00 41.54 3.55
181 182 5.286797 CGTACGATTCGTTTGATTCTAACCA 59.713 40.000 17.93 0.00 41.54 3.67
182 183 5.276067 CCGTACGATTCGTTTGATTCTAACC 60.276 44.000 18.76 0.00 41.54 2.85
183 184 5.711302 CCGTACGATTCGTTTGATTCTAAC 58.289 41.667 18.76 5.05 41.54 2.34
184 185 4.266029 GCCGTACGATTCGTTTGATTCTAA 59.734 41.667 18.76 0.00 41.54 2.10
185 186 3.792956 GCCGTACGATTCGTTTGATTCTA 59.207 43.478 18.76 0.00 41.54 2.10
186 187 2.601763 GCCGTACGATTCGTTTGATTCT 59.398 45.455 18.76 0.00 41.54 2.40
187 188 2.601763 AGCCGTACGATTCGTTTGATTC 59.398 45.455 18.76 2.86 41.54 2.52
188 189 2.347452 CAGCCGTACGATTCGTTTGATT 59.653 45.455 18.76 0.00 41.54 2.57
189 190 1.924524 CAGCCGTACGATTCGTTTGAT 59.075 47.619 18.76 2.26 41.54 2.57
190 191 1.342555 CAGCCGTACGATTCGTTTGA 58.657 50.000 18.76 0.00 41.54 2.69
191 192 0.247145 GCAGCCGTACGATTCGTTTG 60.247 55.000 18.76 9.91 41.54 2.93
192 193 1.680105 CGCAGCCGTACGATTCGTTT 61.680 55.000 18.76 0.00 41.54 3.60
193 194 2.156446 CGCAGCCGTACGATTCGTT 61.156 57.895 18.76 1.79 41.54 3.85
194 195 2.578713 CGCAGCCGTACGATTCGT 60.579 61.111 18.76 16.86 44.35 3.85
195 196 3.320078 CCGCAGCCGTACGATTCG 61.320 66.667 18.76 13.62 0.00 3.34
196 197 2.202703 ACCGCAGCCGTACGATTC 60.203 61.111 18.76 5.42 0.00 2.52
197 198 2.202703 GACCGCAGCCGTACGATT 60.203 61.111 18.76 0.59 0.00 3.34
198 199 3.138798 AGACCGCAGCCGTACGAT 61.139 61.111 18.76 1.33 0.00 3.73
199 200 4.111016 CAGACCGCAGCCGTACGA 62.111 66.667 18.76 0.00 0.00 3.43
200 201 4.111016 TCAGACCGCAGCCGTACG 62.111 66.667 8.69 8.69 0.00 3.67
201 202 2.506438 GTCAGACCGCAGCCGTAC 60.506 66.667 0.00 0.00 0.00 3.67
202 203 3.755628 GGTCAGACCGCAGCCGTA 61.756 66.667 3.05 0.00 0.00 4.02
211 212 0.898326 AATTTTGGGCCGGTCAGACC 60.898 55.000 9.07 9.92 34.05 3.85
212 213 1.743394 CTAATTTTGGGCCGGTCAGAC 59.257 52.381 9.07 0.00 0.00 3.51
213 214 1.340600 CCTAATTTTGGGCCGGTCAGA 60.341 52.381 9.07 0.00 0.00 3.27
214 215 1.102978 CCTAATTTTGGGCCGGTCAG 58.897 55.000 9.07 0.00 0.00 3.51
215 216 3.274601 CCTAATTTTGGGCCGGTCA 57.725 52.632 9.07 1.16 0.00 4.02
222 223 1.515487 GCACCGGCCTAATTTTGGG 59.485 57.895 0.00 0.00 0.00 4.12
223 224 1.138671 CGCACCGGCCTAATTTTGG 59.861 57.895 0.00 0.00 36.38 3.28
224 225 1.516169 GCGCACCGGCCTAATTTTG 60.516 57.895 0.30 0.00 36.38 2.44
225 226 2.882132 GCGCACCGGCCTAATTTT 59.118 55.556 0.30 0.00 36.38 1.82
244 245 4.309933 ACTATTAAACGGTAATAGGCGCC 58.690 43.478 21.89 21.89 40.18 6.53
245 246 6.808212 TGATACTATTAAACGGTAATAGGCGC 59.192 38.462 22.21 0.00 40.18 6.53
246 247 8.642020 GTTGATACTATTAAACGGTAATAGGCG 58.358 37.037 22.21 7.95 40.18 5.52
247 248 9.702494 AGTTGATACTATTAAACGGTAATAGGC 57.298 33.333 22.21 15.22 40.18 3.93
251 252 9.551734 GGGAAGTTGATACTATTAAACGGTAAT 57.448 33.333 0.00 0.00 33.17 1.89
252 253 8.538701 TGGGAAGTTGATACTATTAAACGGTAA 58.461 33.333 0.00 0.00 33.17 2.85
253 254 8.076910 TGGGAAGTTGATACTATTAAACGGTA 57.923 34.615 0.00 0.00 33.17 4.02
254 255 6.949715 TGGGAAGTTGATACTATTAAACGGT 58.050 36.000 0.00 0.00 33.17 4.83
255 256 8.446599 AATGGGAAGTTGATACTATTAAACGG 57.553 34.615 0.00 0.00 33.17 4.44
267 268 9.712305 CGAGATACTATTAAATGGGAAGTTGAT 57.288 33.333 0.00 0.00 0.00 2.57
268 269 8.920174 TCGAGATACTATTAAATGGGAAGTTGA 58.080 33.333 0.00 0.00 0.00 3.18
269 270 9.542462 TTCGAGATACTATTAAATGGGAAGTTG 57.458 33.333 0.00 0.00 0.00 3.16
270 271 9.765795 CTTCGAGATACTATTAAATGGGAAGTT 57.234 33.333 0.00 0.00 0.00 2.66
271 272 9.144298 TCTTCGAGATACTATTAAATGGGAAGT 57.856 33.333 0.00 0.00 0.00 3.01
272 273 9.632807 CTCTTCGAGATACTATTAAATGGGAAG 57.367 37.037 0.00 0.00 0.00 3.46
273 274 9.363401 TCTCTTCGAGATACTATTAAATGGGAA 57.637 33.333 0.00 0.00 33.35 3.97
274 275 8.935614 TCTCTTCGAGATACTATTAAATGGGA 57.064 34.615 0.00 0.00 33.35 4.37
275 276 9.982651 TTTCTCTTCGAGATACTATTAAATGGG 57.017 33.333 0.00 0.00 38.56 4.00
313 314 9.768662 TTTTGAGTTTTCGGAAGTTATACTACT 57.231 29.630 0.00 0.00 0.00 2.57
314 315 9.803130 GTTTTGAGTTTTCGGAAGTTATACTAC 57.197 33.333 0.00 0.00 0.00 2.73
315 316 8.702438 CGTTTTGAGTTTTCGGAAGTTATACTA 58.298 33.333 0.00 0.00 0.00 1.82
316 317 7.307573 CCGTTTTGAGTTTTCGGAAGTTATACT 60.308 37.037 0.00 0.00 43.22 2.12
317 318 6.793680 CCGTTTTGAGTTTTCGGAAGTTATAC 59.206 38.462 0.00 0.00 43.22 1.47
318 319 6.482973 ACCGTTTTGAGTTTTCGGAAGTTATA 59.517 34.615 8.84 0.00 43.22 0.98
319 320 5.297527 ACCGTTTTGAGTTTTCGGAAGTTAT 59.702 36.000 8.84 0.00 43.22 1.89
320 321 4.635324 ACCGTTTTGAGTTTTCGGAAGTTA 59.365 37.500 8.84 0.00 43.22 2.24
321 322 3.441222 ACCGTTTTGAGTTTTCGGAAGTT 59.559 39.130 8.84 0.00 43.22 2.66
322 323 3.011818 ACCGTTTTGAGTTTTCGGAAGT 58.988 40.909 8.84 0.00 43.22 3.01
323 324 3.359654 CACCGTTTTGAGTTTTCGGAAG 58.640 45.455 8.84 0.00 43.22 3.46
324 325 2.478200 GCACCGTTTTGAGTTTTCGGAA 60.478 45.455 8.84 0.00 43.22 4.30
325 326 1.064357 GCACCGTTTTGAGTTTTCGGA 59.936 47.619 8.84 0.00 43.22 4.55
326 327 1.472990 GCACCGTTTTGAGTTTTCGG 58.527 50.000 0.00 0.00 45.53 4.30
327 328 1.472990 GGCACCGTTTTGAGTTTTCG 58.527 50.000 0.00 0.00 0.00 3.46
328 329 1.847818 GGGCACCGTTTTGAGTTTTC 58.152 50.000 0.00 0.00 40.86 2.29
344 345 4.925861 GAGCAGATGAGCCCGGGC 62.926 72.222 39.29 39.29 42.33 6.13
345 346 4.247380 GGAGCAGATGAGCCCGGG 62.247 72.222 19.09 19.09 34.23 5.73
346 347 4.247380 GGGAGCAGATGAGCCCGG 62.247 72.222 0.00 0.00 34.23 5.73
347 348 3.160047 AGGGAGCAGATGAGCCCG 61.160 66.667 0.00 0.00 45.40 6.13
348 349 1.757423 GAGAGGGAGCAGATGAGCCC 61.757 65.000 0.00 0.00 41.00 5.19
349 350 1.047596 TGAGAGGGAGCAGATGAGCC 61.048 60.000 0.00 0.00 34.23 4.70
350 351 0.390124 CTGAGAGGGAGCAGATGAGC 59.610 60.000 0.00 0.00 34.06 4.26
351 352 0.390124 GCTGAGAGGGAGCAGATGAG 59.610 60.000 0.00 0.00 36.40 2.90
352 353 0.325016 TGCTGAGAGGGAGCAGATGA 60.325 55.000 0.00 0.00 41.56 2.92
353 354 0.540454 TTGCTGAGAGGGAGCAGATG 59.460 55.000 0.00 0.00 46.81 2.90
354 355 1.283347 TTTGCTGAGAGGGAGCAGAT 58.717 50.000 0.00 0.00 46.81 2.90
355 356 1.059098 TTTTGCTGAGAGGGAGCAGA 58.941 50.000 0.00 0.00 46.81 4.26
356 357 1.901591 TTTTTGCTGAGAGGGAGCAG 58.098 50.000 0.00 0.00 46.81 4.24
417 418 7.755822 GCGTCAAATTATATACCACCACAAAAA 59.244 33.333 0.00 0.00 0.00 1.94
418 419 7.251994 GCGTCAAATTATATACCACCACAAAA 58.748 34.615 0.00 0.00 0.00 2.44
419 420 6.457122 CGCGTCAAATTATATACCACCACAAA 60.457 38.462 0.00 0.00 0.00 2.83
420 421 5.006844 CGCGTCAAATTATATACCACCACAA 59.993 40.000 0.00 0.00 0.00 3.33
421 422 4.508492 CGCGTCAAATTATATACCACCACA 59.492 41.667 0.00 0.00 0.00 4.17
422 423 4.508861 ACGCGTCAAATTATATACCACCAC 59.491 41.667 5.58 0.00 0.00 4.16
423 424 4.508492 CACGCGTCAAATTATATACCACCA 59.492 41.667 9.86 0.00 0.00 4.17
424 425 4.746115 TCACGCGTCAAATTATATACCACC 59.254 41.667 9.86 0.00 0.00 4.61
425 426 5.107607 CCTCACGCGTCAAATTATATACCAC 60.108 44.000 9.86 0.00 0.00 4.16
426 427 4.986034 CCTCACGCGTCAAATTATATACCA 59.014 41.667 9.86 0.00 0.00 3.25
427 428 4.986659 ACCTCACGCGTCAAATTATATACC 59.013 41.667 9.86 0.00 0.00 2.73
428 429 5.611844 GCACCTCACGCGTCAAATTATATAC 60.612 44.000 9.86 0.00 0.00 1.47
429 430 4.446385 GCACCTCACGCGTCAAATTATATA 59.554 41.667 9.86 0.00 0.00 0.86
430 431 3.247648 GCACCTCACGCGTCAAATTATAT 59.752 43.478 9.86 0.00 0.00 0.86
431 432 2.605818 GCACCTCACGCGTCAAATTATA 59.394 45.455 9.86 0.00 0.00 0.98
432 433 1.396996 GCACCTCACGCGTCAAATTAT 59.603 47.619 9.86 0.00 0.00 1.28
433 434 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
434 435 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
435 436 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
448 449 3.500680 TGAGTTGAATTTTAGGACGCACC 59.499 43.478 0.00 0.00 39.35 5.01
449 450 4.742438 TGAGTTGAATTTTAGGACGCAC 57.258 40.909 0.00 0.00 0.00 5.34
450 451 5.957842 AATGAGTTGAATTTTAGGACGCA 57.042 34.783 0.00 0.00 0.00 5.24
451 452 5.572896 CCAAATGAGTTGAATTTTAGGACGC 59.427 40.000 0.00 0.00 39.87 5.19
452 453 6.801862 GTCCAAATGAGTTGAATTTTAGGACG 59.198 38.462 0.00 0.00 39.87 4.79
453 454 7.657336 TGTCCAAATGAGTTGAATTTTAGGAC 58.343 34.615 0.00 0.00 38.90 3.85
454 455 7.831691 TGTCCAAATGAGTTGAATTTTAGGA 57.168 32.000 0.00 0.00 39.87 2.94
455 456 8.526147 AGATGTCCAAATGAGTTGAATTTTAGG 58.474 33.333 0.00 0.00 39.87 2.69
456 457 9.350357 CAGATGTCCAAATGAGTTGAATTTTAG 57.650 33.333 0.00 0.00 39.87 1.85
457 458 9.076781 TCAGATGTCCAAATGAGTTGAATTTTA 57.923 29.630 0.00 0.00 39.87 1.52
458 459 7.954835 TCAGATGTCCAAATGAGTTGAATTTT 58.045 30.769 0.00 0.00 39.87 1.82
459 460 7.528996 TCAGATGTCCAAATGAGTTGAATTT 57.471 32.000 0.00 0.00 39.87 1.82
460 461 6.349944 GCTCAGATGTCCAAATGAGTTGAATT 60.350 38.462 0.00 0.00 41.00 2.17
461 462 5.125097 GCTCAGATGTCCAAATGAGTTGAAT 59.875 40.000 0.00 0.00 41.00 2.57
462 463 4.456911 GCTCAGATGTCCAAATGAGTTGAA 59.543 41.667 0.00 0.00 41.00 2.69
463 464 4.005650 GCTCAGATGTCCAAATGAGTTGA 58.994 43.478 0.00 0.00 41.00 3.18
464 465 3.754850 TGCTCAGATGTCCAAATGAGTTG 59.245 43.478 11.46 0.00 41.00 3.16
465 466 4.008330 CTGCTCAGATGTCCAAATGAGTT 58.992 43.478 11.46 0.00 41.00 3.01
466 467 3.607741 CTGCTCAGATGTCCAAATGAGT 58.392 45.455 11.46 0.00 41.00 3.41
467 468 2.355132 GCTGCTCAGATGTCCAAATGAG 59.645 50.000 0.29 7.42 41.68 2.90
468 469 2.026542 AGCTGCTCAGATGTCCAAATGA 60.027 45.455 0.00 0.00 0.00 2.57
469 470 2.355132 GAGCTGCTCAGATGTCCAAATG 59.645 50.000 24.02 0.00 0.00 2.32
470 471 2.239150 AGAGCTGCTCAGATGTCCAAAT 59.761 45.455 29.49 3.19 32.06 2.32
471 472 1.627329 AGAGCTGCTCAGATGTCCAAA 59.373 47.619 29.49 0.00 32.06 3.28
472 473 1.206610 GAGAGCTGCTCAGATGTCCAA 59.793 52.381 29.49 0.00 43.38 3.53
473 474 0.822811 GAGAGCTGCTCAGATGTCCA 59.177 55.000 29.49 0.00 43.38 4.02
474 475 0.248990 CGAGAGCTGCTCAGATGTCC 60.249 60.000 29.49 9.58 44.15 4.02
475 476 0.248990 CCGAGAGCTGCTCAGATGTC 60.249 60.000 29.49 17.18 44.15 3.06
476 477 1.815196 CCGAGAGCTGCTCAGATGT 59.185 57.895 29.49 10.20 44.15 3.06
477 478 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
478 479 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
479 480 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
480 481 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
481 482 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
482 483 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
483 484 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
498 499 8.553696 GCATTGTTTTGATCTGATTTGTCTTTT 58.446 29.630 0.00 0.00 0.00 2.27
499 500 7.095940 CGCATTGTTTTGATCTGATTTGTCTTT 60.096 33.333 0.00 0.00 0.00 2.52
500 501 6.364165 CGCATTGTTTTGATCTGATTTGTCTT 59.636 34.615 0.00 0.00 0.00 3.01
501 502 5.860182 CGCATTGTTTTGATCTGATTTGTCT 59.140 36.000 0.00 0.00 0.00 3.41
502 503 5.630680 ACGCATTGTTTTGATCTGATTTGTC 59.369 36.000 0.00 0.00 0.00 3.18
503 504 5.403166 CACGCATTGTTTTGATCTGATTTGT 59.597 36.000 0.00 0.00 0.00 2.83
504 505 5.630264 TCACGCATTGTTTTGATCTGATTTG 59.370 36.000 0.00 0.00 0.00 2.32
505 506 5.771469 TCACGCATTGTTTTGATCTGATTT 58.229 33.333 0.00 0.00 0.00 2.17
506 507 5.375417 TCACGCATTGTTTTGATCTGATT 57.625 34.783 0.00 0.00 0.00 2.57
507 508 5.156355 GTTCACGCATTGTTTTGATCTGAT 58.844 37.500 0.00 0.00 0.00 2.90
508 509 4.036144 TGTTCACGCATTGTTTTGATCTGA 59.964 37.500 0.00 0.00 0.00 3.27
509 510 4.289342 TGTTCACGCATTGTTTTGATCTG 58.711 39.130 0.00 0.00 0.00 2.90
510 511 4.036734 ACTGTTCACGCATTGTTTTGATCT 59.963 37.500 0.00 0.00 0.00 2.75
511 512 4.290155 ACTGTTCACGCATTGTTTTGATC 58.710 39.130 0.00 0.00 0.00 2.92
512 513 4.305989 ACTGTTCACGCATTGTTTTGAT 57.694 36.364 0.00 0.00 0.00 2.57
513 514 3.773860 ACTGTTCACGCATTGTTTTGA 57.226 38.095 0.00 0.00 0.00 2.69
514 515 6.139435 TGTATACTGTTCACGCATTGTTTTG 58.861 36.000 4.17 0.00 0.00 2.44
515 516 6.307031 TGTATACTGTTCACGCATTGTTTT 57.693 33.333 4.17 0.00 0.00 2.43
516 517 5.933187 TGTATACTGTTCACGCATTGTTT 57.067 34.783 4.17 0.00 0.00 2.83
517 518 6.494893 AATGTATACTGTTCACGCATTGTT 57.505 33.333 4.17 0.00 0.00 2.83
518 519 6.494893 AAATGTATACTGTTCACGCATTGT 57.505 33.333 4.17 0.00 0.00 2.71
519 520 7.795431 AAAAATGTATACTGTTCACGCATTG 57.205 32.000 4.17 0.00 0.00 2.82
520 521 8.508062 TGTAAAAATGTATACTGTTCACGCATT 58.492 29.630 4.17 0.00 0.00 3.56
521 522 8.035165 TGTAAAAATGTATACTGTTCACGCAT 57.965 30.769 4.17 0.00 0.00 4.73
522 523 7.385478 TCTGTAAAAATGTATACTGTTCACGCA 59.615 33.333 4.17 0.00 0.00 5.24
523 524 7.686938 GTCTGTAAAAATGTATACTGTTCACGC 59.313 37.037 4.17 0.00 0.00 5.34
524 525 8.166706 GGTCTGTAAAAATGTATACTGTTCACG 58.833 37.037 4.17 0.00 0.00 4.35
525 526 8.448615 GGGTCTGTAAAAATGTATACTGTTCAC 58.551 37.037 4.17 1.91 0.00 3.18
526 527 8.380099 AGGGTCTGTAAAAATGTATACTGTTCA 58.620 33.333 4.17 0.00 0.00 3.18
527 528 8.665685 CAGGGTCTGTAAAAATGTATACTGTTC 58.334 37.037 4.17 0.00 0.00 3.18
528 529 8.380099 TCAGGGTCTGTAAAAATGTATACTGTT 58.620 33.333 4.17 0.00 32.61 3.16
529 530 7.913789 TCAGGGTCTGTAAAAATGTATACTGT 58.086 34.615 4.17 0.00 32.61 3.55
530 531 8.964476 ATCAGGGTCTGTAAAAATGTATACTG 57.036 34.615 4.17 0.00 32.61 2.74
531 532 9.975218 AAATCAGGGTCTGTAAAAATGTATACT 57.025 29.630 4.17 0.00 32.61 2.12
534 535 9.088987 ACAAAATCAGGGTCTGTAAAAATGTAT 57.911 29.630 0.00 0.00 32.61 2.29
535 536 8.472007 ACAAAATCAGGGTCTGTAAAAATGTA 57.528 30.769 0.00 0.00 32.61 2.29
536 537 7.287696 AGACAAAATCAGGGTCTGTAAAAATGT 59.712 33.333 0.00 0.00 40.21 2.71
537 538 7.661040 AGACAAAATCAGGGTCTGTAAAAATG 58.339 34.615 0.00 0.00 40.21 2.32
538 539 7.839680 AGACAAAATCAGGGTCTGTAAAAAT 57.160 32.000 0.00 0.00 40.21 1.82
539 540 7.654022 AAGACAAAATCAGGGTCTGTAAAAA 57.346 32.000 0.00 0.00 40.80 1.94
540 541 7.654022 AAAGACAAAATCAGGGTCTGTAAAA 57.346 32.000 0.00 0.00 40.80 1.52
541 542 7.654022 AAAAGACAAAATCAGGGTCTGTAAA 57.346 32.000 0.00 0.00 40.80 2.01
542 543 7.654022 AAAAAGACAAAATCAGGGTCTGTAA 57.346 32.000 0.00 0.00 40.80 2.41
563 564 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
564 565 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
565 566 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
566 567 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
567 568 0.753111 TATCTGAGCAGCTCTCGGCA 60.753 55.000 23.15 2.15 45.76 5.69
568 569 0.039256 CTATCTGAGCAGCTCTCGGC 60.039 60.000 23.15 0.00 45.76 5.54
570 571 1.946081 TGACTATCTGAGCAGCTCTCG 59.054 52.381 23.15 13.93 44.86 4.04
571 572 4.383850 TTTGACTATCTGAGCAGCTCTC 57.616 45.455 23.15 11.54 42.23 3.20
572 573 4.405036 TCATTTGACTATCTGAGCAGCTCT 59.595 41.667 23.15 5.93 0.00 4.09
573 574 4.691175 TCATTTGACTATCTGAGCAGCTC 58.309 43.478 16.21 16.21 0.00 4.09
574 575 4.161942 ACTCATTTGACTATCTGAGCAGCT 59.838 41.667 0.00 0.00 38.94 4.24
575 576 4.440880 ACTCATTTGACTATCTGAGCAGC 58.559 43.478 0.00 0.00 38.94 5.25
576 577 6.104665 TCAACTCATTTGACTATCTGAGCAG 58.895 40.000 0.00 0.00 39.45 4.24
577 578 6.041423 TCAACTCATTTGACTATCTGAGCA 57.959 37.500 0.00 0.00 39.45 4.26
578 579 6.974932 TTCAACTCATTTGACTATCTGAGC 57.025 37.500 0.00 0.00 44.28 4.26
581 582 9.350357 CCAAAATTCAACTCATTTGACTATCTG 57.650 33.333 0.00 0.00 44.28 2.90
582 583 8.526147 CCCAAAATTCAACTCATTTGACTATCT 58.474 33.333 0.00 0.00 44.28 1.98
583 584 7.761249 CCCCAAAATTCAACTCATTTGACTATC 59.239 37.037 0.00 0.00 44.28 2.08
584 585 7.614494 CCCCAAAATTCAACTCATTTGACTAT 58.386 34.615 0.00 0.00 44.28 2.12
585 586 6.518200 GCCCCAAAATTCAACTCATTTGACTA 60.518 38.462 0.00 0.00 44.28 2.59
586 587 5.742838 GCCCCAAAATTCAACTCATTTGACT 60.743 40.000 0.00 0.00 44.28 3.41
587 588 4.452114 GCCCCAAAATTCAACTCATTTGAC 59.548 41.667 0.00 0.00 44.28 3.18
588 589 4.640364 GCCCCAAAATTCAACTCATTTGA 58.360 39.130 0.00 0.00 42.83 2.69
589 590 3.432933 CGCCCCAAAATTCAACTCATTTG 59.567 43.478 0.00 0.00 36.42 2.32
590 591 3.663025 CGCCCCAAAATTCAACTCATTT 58.337 40.909 0.00 0.00 0.00 2.32
591 592 2.612721 GCGCCCCAAAATTCAACTCATT 60.613 45.455 0.00 0.00 0.00 2.57
592 593 1.066929 GCGCCCCAAAATTCAACTCAT 60.067 47.619 0.00 0.00 0.00 2.90
593 594 0.316841 GCGCCCCAAAATTCAACTCA 59.683 50.000 0.00 0.00 0.00 3.41
594 595 0.316841 TGCGCCCCAAAATTCAACTC 59.683 50.000 4.18 0.00 0.00 3.01
595 596 0.033366 GTGCGCCCCAAAATTCAACT 59.967 50.000 4.18 0.00 0.00 3.16
596 597 0.948623 GGTGCGCCCCAAAATTCAAC 60.949 55.000 3.18 0.00 0.00 3.18
597 598 1.118356 AGGTGCGCCCCAAAATTCAA 61.118 50.000 12.68 0.00 34.57 2.69
598 599 1.531739 GAGGTGCGCCCCAAAATTCA 61.532 55.000 12.68 0.00 34.57 2.57
599 600 1.215382 GAGGTGCGCCCCAAAATTC 59.785 57.895 12.68 0.00 34.57 2.17
600 601 1.532794 TGAGGTGCGCCCCAAAATT 60.533 52.632 12.68 0.00 34.57 1.82
601 602 2.117206 TGAGGTGCGCCCCAAAAT 59.883 55.556 12.68 0.00 34.57 1.82
602 603 2.909965 GTGAGGTGCGCCCCAAAA 60.910 61.111 12.68 0.00 34.57 2.44
611 612 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
612 613 2.930040 AGATAATTTGACGCGTGAGGTG 59.070 45.455 20.70 0.00 0.00 4.00
613 614 3.247006 AGATAATTTGACGCGTGAGGT 57.753 42.857 20.70 0.00 0.00 3.85
614 615 3.489785 GGTAGATAATTTGACGCGTGAGG 59.510 47.826 20.70 0.00 0.00 3.86
615 616 4.026804 GTGGTAGATAATTTGACGCGTGAG 60.027 45.833 20.70 0.00 0.00 3.51
616 617 3.861113 GTGGTAGATAATTTGACGCGTGA 59.139 43.478 20.70 4.74 0.00 4.35
617 618 3.000925 GGTGGTAGATAATTTGACGCGTG 59.999 47.826 20.70 0.00 0.00 5.34
618 619 3.192466 GGTGGTAGATAATTTGACGCGT 58.808 45.455 13.85 13.85 0.00 6.01
619 620 3.000925 GTGGTGGTAGATAATTTGACGCG 59.999 47.826 3.53 3.53 0.00 6.01
620 621 3.936453 TGTGGTGGTAGATAATTTGACGC 59.064 43.478 0.00 0.00 0.00 5.19
621 622 6.489127 TTTGTGGTGGTAGATAATTTGACG 57.511 37.500 0.00 0.00 0.00 4.35
622 623 8.106247 TCTTTTGTGGTGGTAGATAATTTGAC 57.894 34.615 0.00 0.00 0.00 3.18
623 624 8.698973 TTCTTTTGTGGTGGTAGATAATTTGA 57.301 30.769 0.00 0.00 0.00 2.69
624 625 9.927668 ATTTCTTTTGTGGTGGTAGATAATTTG 57.072 29.630 0.00 0.00 0.00 2.32
626 627 9.927668 CAATTTCTTTTGTGGTGGTAGATAATT 57.072 29.630 0.00 0.00 0.00 1.40
627 628 8.531146 CCAATTTCTTTTGTGGTGGTAGATAAT 58.469 33.333 0.00 0.00 0.00 1.28
628 629 7.726291 TCCAATTTCTTTTGTGGTGGTAGATAA 59.274 33.333 0.00 0.00 32.68 1.75
629 630 7.235079 TCCAATTTCTTTTGTGGTGGTAGATA 58.765 34.615 0.00 0.00 32.68 1.98
630 631 6.074648 TCCAATTTCTTTTGTGGTGGTAGAT 58.925 36.000 0.00 0.00 32.68 1.98
631 632 5.450453 TCCAATTTCTTTTGTGGTGGTAGA 58.550 37.500 0.00 0.00 32.68 2.59
632 633 5.782893 TCCAATTTCTTTTGTGGTGGTAG 57.217 39.130 0.00 0.00 32.68 3.18
633 634 6.739331 ATTCCAATTTCTTTTGTGGTGGTA 57.261 33.333 0.00 0.00 32.68 3.25
634 635 5.628797 ATTCCAATTTCTTTTGTGGTGGT 57.371 34.783 0.00 0.00 32.68 4.16
635 636 6.940831 AAATTCCAATTTCTTTTGTGGTGG 57.059 33.333 0.00 0.00 33.54 4.61
691 692 3.632604 TCATCTGCACCCACGTTTAAAAA 59.367 39.130 0.00 0.00 0.00 1.94
692 693 3.215151 TCATCTGCACCCACGTTTAAAA 58.785 40.909 0.00 0.00 0.00 1.52
693 694 2.811431 CTCATCTGCACCCACGTTTAAA 59.189 45.455 0.00 0.00 0.00 1.52
694 695 2.422597 CTCATCTGCACCCACGTTTAA 58.577 47.619 0.00 0.00 0.00 1.52
695 696 1.943968 GCTCATCTGCACCCACGTTTA 60.944 52.381 0.00 0.00 0.00 2.01
696 697 1.237285 GCTCATCTGCACCCACGTTT 61.237 55.000 0.00 0.00 0.00 3.60
697 698 1.672356 GCTCATCTGCACCCACGTT 60.672 57.895 0.00 0.00 0.00 3.99
698 699 2.046892 GCTCATCTGCACCCACGT 60.047 61.111 0.00 0.00 0.00 4.49
699 700 2.821366 GGCTCATCTGCACCCACG 60.821 66.667 0.00 0.00 34.04 4.94
700 701 2.439156 GGGCTCATCTGCACCCAC 60.439 66.667 2.99 0.00 42.33 4.61
701 702 4.100084 CGGGCTCATCTGCACCCA 62.100 66.667 8.42 0.00 42.97 4.51
702 703 4.864334 CCGGGCTCATCTGCACCC 62.864 72.222 0.00 0.00 39.12 4.61
703 704 3.112205 ATCCGGGCTCATCTGCACC 62.112 63.158 0.00 0.00 31.60 5.01
704 705 1.890979 CATCCGGGCTCATCTGCAC 60.891 63.158 0.00 0.00 34.04 4.57
705 706 2.507452 CATCCGGGCTCATCTGCA 59.493 61.111 0.00 0.00 34.04 4.41
706 707 2.976903 GCATCCGGGCTCATCTGC 60.977 66.667 0.00 0.00 0.00 4.26
707 708 1.597302 CTGCATCCGGGCTCATCTG 60.597 63.158 0.00 0.00 34.04 2.90
708 709 1.126329 ATCTGCATCCGGGCTCATCT 61.126 55.000 0.00 0.00 34.04 2.90
709 710 0.250640 AATCTGCATCCGGGCTCATC 60.251 55.000 0.00 0.00 34.04 2.92
710 711 1.002888 CTAATCTGCATCCGGGCTCAT 59.997 52.381 0.00 0.00 34.04 2.90
711 712 0.394192 CTAATCTGCATCCGGGCTCA 59.606 55.000 0.00 0.00 34.04 4.26
712 713 0.952984 GCTAATCTGCATCCGGGCTC 60.953 60.000 0.00 0.00 34.04 4.70
713 714 1.072159 GCTAATCTGCATCCGGGCT 59.928 57.895 0.00 0.00 34.04 5.19
714 715 1.968540 GGCTAATCTGCATCCGGGC 60.969 63.158 0.00 0.00 34.04 6.13
715 716 1.669115 CGGCTAATCTGCATCCGGG 60.669 63.158 0.00 0.00 36.73 5.73
716 717 2.320587 GCGGCTAATCTGCATCCGG 61.321 63.158 0.00 0.00 46.35 5.14
717 718 3.248029 GCGGCTAATCTGCATCCG 58.752 61.111 0.00 0.00 46.35 4.18
722 723 0.460987 ACAGAGTGCGGCTAATCTGC 60.461 55.000 21.14 0.00 44.26 4.26
723 724 2.860735 GTTACAGAGTGCGGCTAATCTG 59.139 50.000 20.24 20.24 45.47 2.90
724 725 2.761208 AGTTACAGAGTGCGGCTAATCT 59.239 45.455 0.00 0.00 0.00 2.40
725 726 3.166489 AGTTACAGAGTGCGGCTAATC 57.834 47.619 0.00 0.00 0.00 1.75
726 727 3.522553 GAAGTTACAGAGTGCGGCTAAT 58.477 45.455 0.00 0.00 0.00 1.73
727 728 2.353406 GGAAGTTACAGAGTGCGGCTAA 60.353 50.000 0.00 0.00 0.00 3.09
728 729 1.203994 GGAAGTTACAGAGTGCGGCTA 59.796 52.381 0.00 0.00 0.00 3.93
729 730 0.037232 GGAAGTTACAGAGTGCGGCT 60.037 55.000 0.00 0.00 0.00 5.52
730 731 1.019805 GGGAAGTTACAGAGTGCGGC 61.020 60.000 0.00 0.00 0.00 6.53
731 732 0.320374 TGGGAAGTTACAGAGTGCGG 59.680 55.000 0.00 0.00 0.00 5.69
732 733 1.000955 AGTGGGAAGTTACAGAGTGCG 59.999 52.381 0.00 0.00 0.00 5.34
733 734 2.841442 AGTGGGAAGTTACAGAGTGC 57.159 50.000 0.00 0.00 0.00 4.40
734 735 6.102663 CAGAATAGTGGGAAGTTACAGAGTG 58.897 44.000 0.00 0.00 0.00 3.51
735 736 5.187967 CCAGAATAGTGGGAAGTTACAGAGT 59.812 44.000 0.00 0.00 33.46 3.24
736 737 5.665459 CCAGAATAGTGGGAAGTTACAGAG 58.335 45.833 0.00 0.00 33.46 3.35
737 738 5.677319 CCAGAATAGTGGGAAGTTACAGA 57.323 43.478 0.00 0.00 33.46 3.41
758 759 2.533463 GGCCCATCAGAGGATCCCC 61.533 68.421 8.55 0.00 33.66 4.81
1194 1228 2.283529 GGCGTCCTTGACAGGGAGA 61.284 63.158 6.54 0.00 41.25 3.71
1729 1776 3.245668 AACGGAGGCTGTGGCTGAG 62.246 63.158 0.00 0.00 38.98 3.35
2222 5524 2.098607 GTGCACCATCAACATGAGGATG 59.901 50.000 18.32 18.32 40.41 3.51
2244 5578 5.125900 TCAACATTTCAGCAGGTAATGGATG 59.874 40.000 10.79 9.38 34.40 3.51
2277 5618 5.401972 CGCATTTTTCAGACTGCAAATTACA 59.598 36.000 1.01 0.00 34.29 2.41
2387 5733 2.285220 CCTGGCACGATATTCACGAAAG 59.715 50.000 0.00 0.00 34.70 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.