Multiple sequence alignment - TraesCS5B01G063600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G063600 chr5B 100.000 9040 0 0 1 9040 71513343 71522382 0.000000e+00 16694.0
1 TraesCS5B01G063600 chr5B 96.206 4903 122 25 1278 6165 71343884 71348737 0.000000e+00 7965.0
2 TraesCS5B01G063600 chr5B 97.698 1694 30 3 6574 8260 71348779 71350470 0.000000e+00 2904.0
3 TraesCS5B01G063600 chr5B 96.403 1668 59 1 1 1667 71621787 71623454 0.000000e+00 2747.0
4 TraesCS5B01G063600 chr5B 95.147 783 36 2 8259 9040 71376741 71377522 0.000000e+00 1234.0
5 TraesCS5B01G063600 chr5B 89.725 691 69 2 1 689 87286308 87286998 0.000000e+00 881.0
6 TraesCS5B01G063600 chr5B 80.316 1077 195 9 6798 7873 71639456 71640516 0.000000e+00 798.0
7 TraesCS5B01G063600 chr5B 87.302 315 27 4 1671 1982 71623649 71623953 1.870000e-91 348.0
8 TraesCS5B01G063600 chr5B 78.322 286 50 12 4847 5128 71628372 71628649 3.360000e-39 174.0
9 TraesCS5B01G063600 chr5B 93.023 86 6 0 2031 2116 71515458 71515373 9.530000e-25 126.0
10 TraesCS5B01G063600 chr5B 97.222 36 1 0 6198 6233 71348772 71348737 2.730000e-05 62.1
11 TraesCS5B01G063600 chr5A 91.879 1293 91 7 695 1982 47965678 47964395 0.000000e+00 1794.0
12 TraesCS5B01G063600 chr5A 80.313 1087 186 20 6798 7873 47957101 47956032 0.000000e+00 797.0
13 TraesCS5B01G063600 chr5A 88.776 392 42 2 8651 9040 247263414 247263023 6.350000e-131 479.0
14 TraesCS5B01G063600 chr5A 88.550 393 42 2 8651 9040 419214280 419214672 2.950000e-129 473.0
15 TraesCS5B01G063600 chr5A 79.298 285 49 9 4847 5128 47958794 47958517 3.330000e-44 191.0
16 TraesCS5B01G063600 chr5A 89.412 85 9 0 2031 2115 44801142 44801058 3.450000e-19 108.0
17 TraesCS5B01G063600 chr5D 90.986 832 66 6 2279 3106 412713364 412714190 0.000000e+00 1112.0
18 TraesCS5B01G063600 chr5D 89.277 858 83 8 2269 3120 212952985 212952131 0.000000e+00 1066.0
19 TraesCS5B01G063600 chr5D 89.031 392 41 2 8651 9040 120783538 120783147 1.360000e-132 484.0
20 TraesCS5B01G063600 chr3D 90.953 829 69 5 2282 3106 607327392 607326566 0.000000e+00 1110.0
21 TraesCS5B01G063600 chr3D 89.647 850 78 9 2270 3114 115643816 115642972 0.000000e+00 1074.0
22 TraesCS5B01G063600 chr4D 89.720 856 78 10 2271 3119 276858113 276857261 0.000000e+00 1085.0
23 TraesCS5B01G063600 chr4D 89.692 844 80 5 2276 3115 494795949 494795109 0.000000e+00 1070.0
24 TraesCS5B01G063600 chr4D 80.303 132 23 3 3315 3446 358073988 358073860 7.470000e-16 97.1
25 TraesCS5B01G063600 chr1A 89.406 859 78 9 2264 3116 583247591 583248442 0.000000e+00 1070.0
26 TraesCS5B01G063600 chr1A 88.776 392 42 2 8651 9040 539708787 539709178 6.350000e-131 479.0
27 TraesCS5B01G063600 chr1A 90.476 84 8 0 2032 2115 527956726 527956809 2.670000e-20 111.0
28 TraesCS5B01G063600 chrUn 89.265 857 83 8 2269 3120 320692157 320693009 0.000000e+00 1064.0
29 TraesCS5B01G063600 chrUn 74.805 770 176 14 6886 7649 310899512 310900269 1.880000e-86 331.0
30 TraesCS5B01G063600 chr3B 92.909 691 48 1 1 690 241408870 241409560 0.000000e+00 1003.0
31 TraesCS5B01G063600 chr3B 92.518 695 45 6 1 692 21217888 21217198 0.000000e+00 989.0
32 TraesCS5B01G063600 chr1B 86.567 871 101 14 2250 3114 125636497 125637357 0.000000e+00 946.0
33 TraesCS5B01G063600 chr1B 76.154 520 111 11 7113 7627 58932797 58933308 2.500000e-65 261.0
34 TraesCS5B01G063600 chr7B 90.922 694 62 1 1 693 613855409 613856102 0.000000e+00 931.0
35 TraesCS5B01G063600 chr7B 89.899 693 67 3 3 693 100379221 100379912 0.000000e+00 889.0
36 TraesCS5B01G063600 chr7B 80.669 688 126 7 4 687 537142315 537141631 2.240000e-145 527.0
37 TraesCS5B01G063600 chr7B 78.027 801 115 38 3300 4066 373785827 373786600 1.790000e-121 448.0
38 TraesCS5B01G063600 chr4B 86.439 848 101 12 2259 3098 629747087 629747928 0.000000e+00 917.0
39 TraesCS5B01G063600 chr4B 81.481 135 17 8 3315 3447 441164902 441164774 4.460000e-18 104.0
40 TraesCS5B01G063600 chr2B 88.905 694 73 3 1 692 10455817 10455126 0.000000e+00 852.0
41 TraesCS5B01G063600 chr2B 89.691 97 10 0 2026 2122 775395978 775396074 3.430000e-24 124.0
42 TraesCS5B01G063600 chr2B 90.588 85 8 0 2031 2115 493642846 493642930 7.420000e-21 113.0
43 TraesCS5B01G063600 chr7D 88.953 697 66 10 2257 2946 549852104 549852796 0.000000e+00 850.0
44 TraesCS5B01G063600 chr7D 85.626 647 92 1 47 692 55363037 55363683 0.000000e+00 678.0
45 TraesCS5B01G063600 chr7D 89.031 392 40 3 8651 9040 60368240 60368630 4.910000e-132 483.0
46 TraesCS5B01G063600 chr7D 83.803 142 19 4 3927 4066 405114462 405114601 2.050000e-26 132.0
47 TraesCS5B01G063600 chr6B 86.497 785 90 11 2258 3036 713754896 713754122 0.000000e+00 848.0
48 TraesCS5B01G063600 chr4A 84.987 786 106 11 2256 3033 739760943 739760162 0.000000e+00 787.0
49 TraesCS5B01G063600 chr4A 75.497 302 60 13 8273 8567 485130267 485130561 1.580000e-27 135.0
50 TraesCS5B01G063600 chr4A 80.159 126 21 3 3306 3431 107373811 107373932 3.480000e-14 91.6
51 TraesCS5B01G063600 chr1D 89.003 391 42 1 8651 9040 175775653 175776043 4.910000e-132 483.0
52 TraesCS5B01G063600 chr1D 75.835 509 111 10 7113 7617 39791268 39791768 1.950000e-61 248.0
53 TraesCS5B01G063600 chr1D 89.130 92 9 1 2032 2123 275947623 275947713 7.420000e-21 113.0
54 TraesCS5B01G063600 chr6D 88.636 396 43 2 8647 9040 389704937 389705332 1.770000e-131 481.0
55 TraesCS5B01G063600 chr6D 88.265 392 44 2 8651 9040 82143462 82143853 1.370000e-127 468.0
56 TraesCS5B01G063600 chr6D 78.212 537 117 0 7113 7649 468056978 468056442 2.420000e-90 344.0
57 TraesCS5B01G063600 chr6D 75.130 772 170 17 6886 7649 468146949 468146192 8.690000e-90 342.0
58 TraesCS5B01G063600 chr6D 74.735 756 179 9 6886 7638 468096551 468095805 2.430000e-85 327.0
59 TraesCS5B01G063600 chr6D 80.952 336 45 12 3721 4050 455967379 455967057 1.950000e-61 248.0
60 TraesCS5B01G063600 chr6A 75.621 644 149 5 6996 7638 614162631 614161995 6.810000e-81 313.0
61 TraesCS5B01G063600 chr6A 80.412 97 5 10 3854 3940 49485424 49485516 2.730000e-05 62.1
62 TraesCS5B01G063600 chr2D 80.368 326 50 13 3698 4017 298846479 298846162 1.520000e-57 235.0
63 TraesCS5B01G063600 chr2A 92.857 84 6 0 2036 2119 710755068 710755151 1.230000e-23 122.0
64 TraesCS5B01G063600 chr3A 88.542 96 8 2 2021 2116 594525041 594525133 7.420000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G063600 chr5B 71513343 71522382 9039 False 16694.0 16694 100.0000 1 9040 1 chr5B.!!$F2 9039
1 TraesCS5B01G063600 chr5B 71343884 71350470 6586 False 5434.5 7965 96.9520 1278 8260 2 chr5B.!!$F6 6982
2 TraesCS5B01G063600 chr5B 71621787 71623953 2166 False 1547.5 2747 91.8525 1 1982 2 chr5B.!!$F7 1981
3 TraesCS5B01G063600 chr5B 71376741 71377522 781 False 1234.0 1234 95.1470 8259 9040 1 chr5B.!!$F1 781
4 TraesCS5B01G063600 chr5B 87286308 87286998 690 False 881.0 881 89.7250 1 689 1 chr5B.!!$F5 688
5 TraesCS5B01G063600 chr5B 71639456 71640516 1060 False 798.0 798 80.3160 6798 7873 1 chr5B.!!$F4 1075
6 TraesCS5B01G063600 chr5A 47964395 47965678 1283 True 1794.0 1794 91.8790 695 1982 1 chr5A.!!$R2 1287
7 TraesCS5B01G063600 chr5A 47956032 47958794 2762 True 494.0 797 79.8055 4847 7873 2 chr5A.!!$R4 3026
8 TraesCS5B01G063600 chr5D 412713364 412714190 826 False 1112.0 1112 90.9860 2279 3106 1 chr5D.!!$F1 827
9 TraesCS5B01G063600 chr5D 212952131 212952985 854 True 1066.0 1066 89.2770 2269 3120 1 chr5D.!!$R2 851
10 TraesCS5B01G063600 chr3D 607326566 607327392 826 True 1110.0 1110 90.9530 2282 3106 1 chr3D.!!$R2 824
11 TraesCS5B01G063600 chr3D 115642972 115643816 844 True 1074.0 1074 89.6470 2270 3114 1 chr3D.!!$R1 844
12 TraesCS5B01G063600 chr4D 276857261 276858113 852 True 1085.0 1085 89.7200 2271 3119 1 chr4D.!!$R1 848
13 TraesCS5B01G063600 chr4D 494795109 494795949 840 True 1070.0 1070 89.6920 2276 3115 1 chr4D.!!$R3 839
14 TraesCS5B01G063600 chr1A 583247591 583248442 851 False 1070.0 1070 89.4060 2264 3116 1 chr1A.!!$F3 852
15 TraesCS5B01G063600 chrUn 320692157 320693009 852 False 1064.0 1064 89.2650 2269 3120 1 chrUn.!!$F2 851
16 TraesCS5B01G063600 chrUn 310899512 310900269 757 False 331.0 331 74.8050 6886 7649 1 chrUn.!!$F1 763
17 TraesCS5B01G063600 chr3B 241408870 241409560 690 False 1003.0 1003 92.9090 1 690 1 chr3B.!!$F1 689
18 TraesCS5B01G063600 chr3B 21217198 21217888 690 True 989.0 989 92.5180 1 692 1 chr3B.!!$R1 691
19 TraesCS5B01G063600 chr1B 125636497 125637357 860 False 946.0 946 86.5670 2250 3114 1 chr1B.!!$F2 864
20 TraesCS5B01G063600 chr1B 58932797 58933308 511 False 261.0 261 76.1540 7113 7627 1 chr1B.!!$F1 514
21 TraesCS5B01G063600 chr7B 613855409 613856102 693 False 931.0 931 90.9220 1 693 1 chr7B.!!$F3 692
22 TraesCS5B01G063600 chr7B 100379221 100379912 691 False 889.0 889 89.8990 3 693 1 chr7B.!!$F1 690
23 TraesCS5B01G063600 chr7B 537141631 537142315 684 True 527.0 527 80.6690 4 687 1 chr7B.!!$R1 683
24 TraesCS5B01G063600 chr7B 373785827 373786600 773 False 448.0 448 78.0270 3300 4066 1 chr7B.!!$F2 766
25 TraesCS5B01G063600 chr4B 629747087 629747928 841 False 917.0 917 86.4390 2259 3098 1 chr4B.!!$F1 839
26 TraesCS5B01G063600 chr2B 10455126 10455817 691 True 852.0 852 88.9050 1 692 1 chr2B.!!$R1 691
27 TraesCS5B01G063600 chr7D 549852104 549852796 692 False 850.0 850 88.9530 2257 2946 1 chr7D.!!$F4 689
28 TraesCS5B01G063600 chr7D 55363037 55363683 646 False 678.0 678 85.6260 47 692 1 chr7D.!!$F1 645
29 TraesCS5B01G063600 chr6B 713754122 713754896 774 True 848.0 848 86.4970 2258 3036 1 chr6B.!!$R1 778
30 TraesCS5B01G063600 chr4A 739760162 739760943 781 True 787.0 787 84.9870 2256 3033 1 chr4A.!!$R1 777
31 TraesCS5B01G063600 chr1D 39791268 39791768 500 False 248.0 248 75.8350 7113 7617 1 chr1D.!!$F1 504
32 TraesCS5B01G063600 chr6D 468056442 468056978 536 True 344.0 344 78.2120 7113 7649 1 chr6D.!!$R2 536
33 TraesCS5B01G063600 chr6D 468146192 468146949 757 True 342.0 342 75.1300 6886 7649 1 chr6D.!!$R4 763
34 TraesCS5B01G063600 chr6D 468095805 468096551 746 True 327.0 327 74.7350 6886 7638 1 chr6D.!!$R3 752
35 TraesCS5B01G063600 chr6A 614161995 614162631 636 True 313.0 313 75.6210 6996 7638 1 chr6A.!!$R1 642

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 503 0.597072 AGTTCCTCGTCGGTTCTCAC 59.403 55.000 0.0 0.0 0.00 3.51 F
1307 1316 1.139853 AGATCGGCAACTTCTCCATCC 59.860 52.381 0.0 0.0 0.00 3.51 F
3022 3253 0.523072 AGATTTCCACATGCACGCAC 59.477 50.000 0.0 0.0 0.00 5.34 F
3061 3292 2.300723 TCTGTGTGTTATAGGGCGTGTT 59.699 45.455 0.0 0.0 0.00 3.32 F
4589 4864 2.919666 ATTGCACCATTTGTCGTAGC 57.080 45.000 0.0 0.0 0.00 3.58 F
6272 6602 0.034089 GCACCTCAATTAGCCCAGGT 60.034 55.000 0.0 0.0 40.05 4.00 F
6509 6839 0.036164 CAACGATCCCCTGTGACCAA 59.964 55.000 0.0 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2250 2457 0.533308 AAGGGAACGTACGCTTTGCA 60.533 50.000 16.72 0.0 39.39 4.08 R
3061 3292 0.535553 GGTGTAAGTCAAACCCGCCA 60.536 55.000 0.00 0.0 0.00 5.69 R
4696 4974 2.489329 GGTGCATTCATAGTGTGTGCTT 59.511 45.455 0.00 0.0 36.78 3.91 R
4728 5006 6.756074 CACCACAGAAAATGCAGAAAAACTTA 59.244 34.615 0.00 0.0 0.00 2.24 R
6253 6583 0.034089 ACCTGGGCTAATTGAGGTGC 60.034 55.000 0.00 0.0 37.44 5.01 R
8012 8521 2.687370 GGGCAAACAATTCCACATGTC 58.313 47.619 0.00 0.0 0.00 3.06 R
8495 9011 4.508861 GCATGCCCATGTATCATTGTTTTC 59.491 41.667 6.36 0.0 40.80 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
276 280 2.383245 CTTAGGTGGCGGCCGATCAT 62.383 60.000 33.48 17.68 0.00 2.45
333 337 1.271325 TGGCAAGAATCCAGAAGCGAA 60.271 47.619 0.00 0.00 0.00 4.70
499 503 0.597072 AGTTCCTCGTCGGTTCTCAC 59.403 55.000 0.00 0.00 0.00 3.51
746 754 9.027202 GGTCCCAAATTACTTGTCCTAAATTTA 57.973 33.333 0.00 0.00 31.97 1.40
956 964 2.885135 TGAGAATGCATGTTCAGGGT 57.115 45.000 0.00 0.00 0.00 4.34
1044 1053 2.185494 ACGATCGACCGGGAGTAGC 61.185 63.158 24.34 0.00 0.00 3.58
1307 1316 1.139853 AGATCGGCAACTTCTCCATCC 59.860 52.381 0.00 0.00 0.00 3.51
1341 1350 2.343758 CGTGTGGCTGCCTGTAGT 59.656 61.111 21.03 0.00 0.00 2.73
1921 2128 1.656652 GATACATCTGCAACTGCCGT 58.343 50.000 0.00 0.00 41.18 5.68
2050 2257 5.440207 TGGTACCCCCTCTGTAAATTAAC 57.560 43.478 10.07 0.00 0.00 2.01
2057 2264 7.574607 ACCCCCTCTGTAAATTAACATAAGAG 58.425 38.462 0.00 0.00 0.00 2.85
2059 2266 6.202954 CCCCTCTGTAAATTAACATAAGAGCG 59.797 42.308 0.00 0.00 0.00 5.03
2060 2267 6.761714 CCCTCTGTAAATTAACATAAGAGCGT 59.238 38.462 0.00 0.00 0.00 5.07
2061 2268 7.280205 CCCTCTGTAAATTAACATAAGAGCGTT 59.720 37.037 0.00 0.00 0.00 4.84
2062 2269 8.665685 CCTCTGTAAATTAACATAAGAGCGTTT 58.334 33.333 0.00 0.00 0.00 3.60
2070 2277 9.601217 AATTAACATAAGAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 37.82 3.41
2073 2280 8.997621 AACATAAGAGCGTTTAGATCACTAAA 57.002 30.769 0.00 0.00 43.52 1.85
2074 2281 9.601217 AACATAAGAGCGTTTAGATCACTAAAT 57.399 29.630 0.00 0.00 46.01 1.40
2109 2316 8.773404 AACGCTCTTATGTTAATTTACAGAGT 57.227 30.769 11.59 1.19 0.00 3.24
2154 2361 1.625616 CTATCCGACGAACGTTTGCT 58.374 50.000 15.63 3.02 40.78 3.91
2169 2376 3.120199 CGTTTGCTAGGATGACAACCTTG 60.120 47.826 9.85 9.11 38.76 3.61
2170 2377 3.788227 TTGCTAGGATGACAACCTTGT 57.212 42.857 9.85 0.00 45.65 3.16
2250 2457 1.600023 TTTTTCGCACGGATCTTGGT 58.400 45.000 0.00 0.00 0.00 3.67
2478 2687 3.430931 GTCTCGACGAGATCTCCAAAAG 58.569 50.000 28.81 9.76 40.98 2.27
2563 2776 3.513912 ACACTGTAGTTGCCATAGTGCTA 59.486 43.478 0.00 0.00 41.74 3.49
3022 3253 0.523072 AGATTTCCACATGCACGCAC 59.477 50.000 0.00 0.00 0.00 5.34
3061 3292 2.300723 TCTGTGTGTTATAGGGCGTGTT 59.699 45.455 0.00 0.00 0.00 3.32
3301 3532 9.554395 TTTTTGAAAGAACCAAAATCCCTATTC 57.446 29.630 0.00 0.00 41.39 1.75
3392 3624 6.603237 TTATCTTTTCGTGAGCATGGTATG 57.397 37.500 0.00 0.00 0.00 2.39
3400 3632 5.182487 TCGTGAGCATGGTATGTTGTTATT 58.818 37.500 0.00 0.00 0.00 1.40
3505 3737 7.316640 TGGTCGTTTAACAATCAAAATATGGG 58.683 34.615 0.00 0.00 0.00 4.00
3563 3796 9.950680 ACTAAAAGCATGACATTTTATTATCGG 57.049 29.630 0.00 0.00 32.17 4.18
3897 4167 5.933617 TCAGATCATGGAAATTAGGGTCTG 58.066 41.667 0.00 0.00 33.65 3.51
4135 4407 5.876651 TCTCTTCATGCATGTACATACCT 57.123 39.130 25.43 0.00 0.00 3.08
4136 4408 5.604565 TCTCTTCATGCATGTACATACCTG 58.395 41.667 25.43 6.53 0.00 4.00
4246 4518 4.376450 CGGTCTCTTCTTTTCAAGAACG 57.624 45.455 0.00 0.00 42.31 3.95
4361 4633 7.871853 TGAACTTTCATAAGCTACTTTTGACC 58.128 34.615 0.00 0.00 32.84 4.02
4504 4779 6.260714 AGTCCTTCAAAACATTTCATTTTGCC 59.739 34.615 5.52 0.00 43.62 4.52
4589 4864 2.919666 ATTGCACCATTTGTCGTAGC 57.080 45.000 0.00 0.00 0.00 3.58
4618 4893 6.451064 AGTTCTCACGGAAACAAAAGAAAT 57.549 33.333 0.00 0.00 35.51 2.17
4639 4914 5.893897 ATCTCCATGCTTCTTTTTGAGTC 57.106 39.130 0.00 0.00 0.00 3.36
4660 4935 4.986659 GTCTGAACTTTTGCATGCAATTCT 59.013 37.500 32.27 17.51 35.70 2.40
4720 4998 3.076621 CACACACTATGAATGCACCAGT 58.923 45.455 0.00 0.00 0.00 4.00
4728 5006 7.829211 ACACTATGAATGCACCAGTAATTTAGT 59.171 33.333 0.00 0.00 0.00 2.24
4819 5097 8.537728 TTCTTGGATTAAATATGCCTTGACAT 57.462 30.769 0.00 0.00 0.00 3.06
4912 5190 4.082949 CCTATATGCTGAATCACGGTCGTA 60.083 45.833 0.00 0.00 0.00 3.43
5172 5458 6.265196 ACAGTGTGATGTGTTATTTGAATGGT 59.735 34.615 0.00 0.00 30.46 3.55
5537 5865 2.627945 TCTGAAGTCGCACAAAACAGT 58.372 42.857 0.00 0.00 0.00 3.55
5546 5874 3.006659 GCACAAAACAGTAATGCGGAA 57.993 42.857 0.00 0.00 0.00 4.30
5547 5875 3.376540 GCACAAAACAGTAATGCGGAAA 58.623 40.909 0.00 0.00 0.00 3.13
5548 5876 3.181575 GCACAAAACAGTAATGCGGAAAC 59.818 43.478 0.00 0.00 0.00 2.78
5549 5877 3.733727 CACAAAACAGTAATGCGGAAACC 59.266 43.478 0.00 0.00 0.00 3.27
5550 5878 3.634910 ACAAAACAGTAATGCGGAAACCT 59.365 39.130 0.00 0.00 0.00 3.50
5568 5898 8.225777 CGGAAACCTAAAGTATGTTTTAGTGAC 58.774 37.037 8.88 0.00 0.00 3.67
5623 5953 3.117888 AGAAGCTTCTGGTCAGAAAACCA 60.118 43.478 27.96 0.00 45.75 3.67
5739 6069 4.472701 ACCTTGCGGTGGGAGATA 57.527 55.556 0.00 0.00 43.51 1.98
5938 6268 0.740516 GCAGAGGAGAGCACTCAAGC 60.741 60.000 13.37 6.98 44.22 4.01
6010 6340 6.399639 TCACCCTGATTTAACTGAAAAACC 57.600 37.500 0.00 0.00 0.00 3.27
6042 6372 7.172019 GCTAAAATTTGATGAAATATGGGCCTG 59.828 37.037 4.53 0.00 31.18 4.85
6063 6393 4.022603 TGTTAGGGCACGTATGGTAACTA 58.977 43.478 0.00 0.00 37.61 2.24
6142 6472 7.715249 GCAATGTATAATGGGTTGTCTCTTAGA 59.285 37.037 0.00 0.00 0.00 2.10
6184 6514 8.821686 AATATGTTTGAATATGTGTTGGGAGA 57.178 30.769 0.00 0.00 0.00 3.71
6185 6515 9.425248 AATATGTTTGAATATGTGTTGGGAGAT 57.575 29.630 0.00 0.00 0.00 2.75
6188 6518 8.821686 TGTTTGAATATGTGTTGGGAGATATT 57.178 30.769 0.00 0.00 0.00 1.28
6189 6519 8.685427 TGTTTGAATATGTGTTGGGAGATATTG 58.315 33.333 0.00 0.00 0.00 1.90
6190 6520 8.686334 GTTTGAATATGTGTTGGGAGATATTGT 58.314 33.333 0.00 0.00 0.00 2.71
6192 6522 9.913310 TTGAATATGTGTTGGGAGATATTGTTA 57.087 29.630 0.00 0.00 0.00 2.41
6199 6529 9.613428 TGTGTTGGGAGATATTGTTATTAAGAG 57.387 33.333 0.00 0.00 0.00 2.85
6200 6530 9.057089 GTGTTGGGAGATATTGTTATTAAGAGG 57.943 37.037 0.00 0.00 0.00 3.69
6201 6531 8.778059 TGTTGGGAGATATTGTTATTAAGAGGT 58.222 33.333 0.00 0.00 0.00 3.85
6202 6532 9.274206 GTTGGGAGATATTGTTATTAAGAGGTC 57.726 37.037 0.00 0.00 0.00 3.85
6203 6533 8.561536 TGGGAGATATTGTTATTAAGAGGTCA 57.438 34.615 0.00 0.00 0.00 4.02
6231 6561 8.747538 TCTTAGTTAAGAGAAGGCAAGTTTTT 57.252 30.769 0.00 0.00 37.40 1.94
6232 6562 8.837389 TCTTAGTTAAGAGAAGGCAAGTTTTTC 58.163 33.333 0.00 0.00 37.40 2.29
6233 6563 8.747538 TTAGTTAAGAGAAGGCAAGTTTTTCT 57.252 30.769 0.00 0.00 34.06 2.52
6234 6564 7.646548 AGTTAAGAGAAGGCAAGTTTTTCTT 57.353 32.000 0.00 0.00 36.75 2.52
6235 6565 8.067751 AGTTAAGAGAAGGCAAGTTTTTCTTT 57.932 30.769 0.00 0.00 33.63 2.52
6236 6566 8.191446 AGTTAAGAGAAGGCAAGTTTTTCTTTC 58.809 33.333 0.00 0.00 33.63 2.62
6237 6567 6.782082 AAGAGAAGGCAAGTTTTTCTTTCT 57.218 33.333 0.00 0.00 33.63 2.52
6238 6568 6.782082 AGAGAAGGCAAGTTTTTCTTTCTT 57.218 33.333 0.00 0.00 33.63 2.52
6239 6569 6.800543 AGAGAAGGCAAGTTTTTCTTTCTTC 58.199 36.000 0.00 0.00 40.34 2.87
6240 6570 5.582550 AGAAGGCAAGTTTTTCTTTCTTCG 58.417 37.500 0.00 0.00 42.29 3.79
6241 6571 4.307443 AGGCAAGTTTTTCTTTCTTCGG 57.693 40.909 0.00 0.00 33.63 4.30
6242 6572 3.068165 AGGCAAGTTTTTCTTTCTTCGGG 59.932 43.478 0.00 0.00 33.63 5.14
6243 6573 3.181479 GGCAAGTTTTTCTTTCTTCGGGT 60.181 43.478 0.00 0.00 33.63 5.28
6244 6574 4.430007 GCAAGTTTTTCTTTCTTCGGGTT 58.570 39.130 0.00 0.00 33.63 4.11
6245 6575 4.503007 GCAAGTTTTTCTTTCTTCGGGTTC 59.497 41.667 0.00 0.00 33.63 3.62
6246 6576 5.678871 GCAAGTTTTTCTTTCTTCGGGTTCT 60.679 40.000 0.00 0.00 33.63 3.01
6247 6577 5.752892 AGTTTTTCTTTCTTCGGGTTCTC 57.247 39.130 0.00 0.00 0.00 2.87
6248 6578 5.437946 AGTTTTTCTTTCTTCGGGTTCTCT 58.562 37.500 0.00 0.00 0.00 3.10
6249 6579 5.886474 AGTTTTTCTTTCTTCGGGTTCTCTT 59.114 36.000 0.00 0.00 0.00 2.85
6250 6580 6.377429 AGTTTTTCTTTCTTCGGGTTCTCTTT 59.623 34.615 0.00 0.00 0.00 2.52
6251 6581 6.769134 TTTTCTTTCTTCGGGTTCTCTTTT 57.231 33.333 0.00 0.00 0.00 2.27
6252 6582 6.769134 TTTCTTTCTTCGGGTTCTCTTTTT 57.231 33.333 0.00 0.00 0.00 1.94
6253 6583 5.751243 TCTTTCTTCGGGTTCTCTTTTTG 57.249 39.130 0.00 0.00 0.00 2.44
6254 6584 3.982576 TTCTTCGGGTTCTCTTTTTGC 57.017 42.857 0.00 0.00 0.00 3.68
6255 6585 2.925724 TCTTCGGGTTCTCTTTTTGCA 58.074 42.857 0.00 0.00 0.00 4.08
6256 6586 2.616842 TCTTCGGGTTCTCTTTTTGCAC 59.383 45.455 0.00 0.00 0.00 4.57
6257 6587 1.314730 TCGGGTTCTCTTTTTGCACC 58.685 50.000 0.00 0.00 0.00 5.01
6258 6588 1.133915 TCGGGTTCTCTTTTTGCACCT 60.134 47.619 0.00 0.00 0.00 4.00
6259 6589 1.266989 CGGGTTCTCTTTTTGCACCTC 59.733 52.381 0.00 0.00 0.00 3.85
6260 6590 2.306847 GGGTTCTCTTTTTGCACCTCA 58.693 47.619 0.00 0.00 0.00 3.86
6261 6591 2.693074 GGGTTCTCTTTTTGCACCTCAA 59.307 45.455 0.00 0.00 0.00 3.02
6262 6592 3.321968 GGGTTCTCTTTTTGCACCTCAAT 59.678 43.478 0.00 0.00 34.12 2.57
6263 6593 4.202253 GGGTTCTCTTTTTGCACCTCAATT 60.202 41.667 0.00 0.00 34.12 2.32
6264 6594 5.010617 GGGTTCTCTTTTTGCACCTCAATTA 59.989 40.000 0.00 0.00 34.12 1.40
6265 6595 6.152379 GGTTCTCTTTTTGCACCTCAATTAG 58.848 40.000 0.00 0.00 34.12 1.73
6266 6596 5.376854 TCTCTTTTTGCACCTCAATTAGC 57.623 39.130 0.00 0.00 34.12 3.09
6267 6597 4.218417 TCTCTTTTTGCACCTCAATTAGCC 59.782 41.667 0.00 0.00 34.12 3.93
6268 6598 3.258123 TCTTTTTGCACCTCAATTAGCCC 59.742 43.478 0.00 0.00 34.12 5.19
6269 6599 2.300956 TTTGCACCTCAATTAGCCCA 57.699 45.000 0.00 0.00 34.12 5.36
6270 6600 1.838112 TTGCACCTCAATTAGCCCAG 58.162 50.000 0.00 0.00 0.00 4.45
6271 6601 0.034186 TGCACCTCAATTAGCCCAGG 60.034 55.000 0.00 0.00 0.00 4.45
6272 6602 0.034089 GCACCTCAATTAGCCCAGGT 60.034 55.000 0.00 0.00 40.05 4.00
6273 6603 1.211949 GCACCTCAATTAGCCCAGGTA 59.788 52.381 0.00 0.00 37.13 3.08
6274 6604 2.356741 GCACCTCAATTAGCCCAGGTAA 60.357 50.000 0.00 0.00 37.13 2.85
6275 6605 3.279434 CACCTCAATTAGCCCAGGTAAC 58.721 50.000 0.00 0.00 37.13 2.50
6293 6623 5.974108 GGTAACTGTCTTAGAATAGCACCA 58.026 41.667 11.10 0.00 0.00 4.17
6294 6624 6.583562 GGTAACTGTCTTAGAATAGCACCAT 58.416 40.000 11.10 0.00 0.00 3.55
6295 6625 7.048512 GGTAACTGTCTTAGAATAGCACCATT 58.951 38.462 11.10 0.00 0.00 3.16
6296 6626 6.992063 AACTGTCTTAGAATAGCACCATTG 57.008 37.500 0.00 0.00 0.00 2.82
6297 6627 6.054860 ACTGTCTTAGAATAGCACCATTGT 57.945 37.500 0.00 0.00 0.00 2.71
6298 6628 7.182817 ACTGTCTTAGAATAGCACCATTGTA 57.817 36.000 0.00 0.00 0.00 2.41
6299 6629 7.042335 ACTGTCTTAGAATAGCACCATTGTAC 58.958 38.462 0.00 0.00 0.00 2.90
6300 6630 6.941857 TGTCTTAGAATAGCACCATTGTACA 58.058 36.000 0.00 0.00 0.00 2.90
6301 6631 7.564793 TGTCTTAGAATAGCACCATTGTACAT 58.435 34.615 0.00 0.00 0.00 2.29
6302 6632 7.495606 TGTCTTAGAATAGCACCATTGTACATG 59.504 37.037 0.00 0.00 0.00 3.21
6303 6633 7.495934 GTCTTAGAATAGCACCATTGTACATGT 59.504 37.037 2.69 2.69 0.00 3.21
6304 6634 7.710907 TCTTAGAATAGCACCATTGTACATGTC 59.289 37.037 0.00 0.00 0.00 3.06
6305 6635 5.126067 AGAATAGCACCATTGTACATGTCC 58.874 41.667 0.00 0.00 0.00 4.02
6306 6636 4.778213 ATAGCACCATTGTACATGTCCT 57.222 40.909 0.00 0.00 0.00 3.85
6307 6637 3.439857 AGCACCATTGTACATGTCCTT 57.560 42.857 0.00 0.00 0.00 3.36
6308 6638 4.568072 AGCACCATTGTACATGTCCTTA 57.432 40.909 0.00 0.00 0.00 2.69
6309 6639 4.917385 AGCACCATTGTACATGTCCTTAA 58.083 39.130 0.00 0.00 0.00 1.85
6310 6640 5.509498 AGCACCATTGTACATGTCCTTAAT 58.491 37.500 0.00 0.00 0.00 1.40
6311 6641 5.357878 AGCACCATTGTACATGTCCTTAATG 59.642 40.000 0.00 9.13 0.00 1.90
6312 6642 5.125417 GCACCATTGTACATGTCCTTAATGT 59.875 40.000 0.00 0.00 41.14 2.71
6313 6643 6.350110 GCACCATTGTACATGTCCTTAATGTT 60.350 38.462 0.00 0.00 39.05 2.71
6314 6644 7.028962 CACCATTGTACATGTCCTTAATGTTG 58.971 38.462 0.00 4.75 39.05 3.33
6315 6645 6.152661 ACCATTGTACATGTCCTTAATGTTGG 59.847 38.462 0.00 1.53 39.05 3.77
6316 6646 6.152661 CCATTGTACATGTCCTTAATGTTGGT 59.847 38.462 0.00 0.00 39.05 3.67
6317 6647 6.567687 TTGTACATGTCCTTAATGTTGGTG 57.432 37.500 0.00 0.00 39.05 4.17
6318 6648 5.626142 TGTACATGTCCTTAATGTTGGTGT 58.374 37.500 0.00 0.00 39.05 4.16
6319 6649 6.770542 TGTACATGTCCTTAATGTTGGTGTA 58.229 36.000 0.00 0.00 39.05 2.90
6320 6650 7.398829 TGTACATGTCCTTAATGTTGGTGTAT 58.601 34.615 0.00 0.00 39.05 2.29
6321 6651 7.885922 TGTACATGTCCTTAATGTTGGTGTATT 59.114 33.333 0.00 0.00 39.05 1.89
6322 6652 7.775053 ACATGTCCTTAATGTTGGTGTATTT 57.225 32.000 0.00 0.00 34.60 1.40
6323 6653 7.826690 ACATGTCCTTAATGTTGGTGTATTTC 58.173 34.615 0.00 0.00 34.60 2.17
6324 6654 7.450014 ACATGTCCTTAATGTTGGTGTATTTCA 59.550 33.333 0.00 0.00 34.60 2.69
6325 6655 7.447374 TGTCCTTAATGTTGGTGTATTTCAG 57.553 36.000 0.00 0.00 0.00 3.02
6326 6656 6.072175 TGTCCTTAATGTTGGTGTATTTCAGC 60.072 38.462 0.00 0.00 43.90 4.26
6327 6657 5.123186 TCCTTAATGTTGGTGTATTTCAGCG 59.877 40.000 0.00 0.00 46.24 5.18
6328 6658 5.123186 CCTTAATGTTGGTGTATTTCAGCGA 59.877 40.000 0.00 0.00 46.24 4.93
6329 6659 6.183360 CCTTAATGTTGGTGTATTTCAGCGAT 60.183 38.462 0.00 0.00 46.24 4.58
6330 6660 7.011950 CCTTAATGTTGGTGTATTTCAGCGATA 59.988 37.037 0.00 0.00 46.24 2.92
6331 6661 5.991328 ATGTTGGTGTATTTCAGCGATAG 57.009 39.130 0.00 0.00 46.24 2.08
6332 6662 5.079689 TGTTGGTGTATTTCAGCGATAGA 57.920 39.130 0.00 0.00 46.24 1.98
6333 6663 4.868171 TGTTGGTGTATTTCAGCGATAGAC 59.132 41.667 0.00 0.00 46.24 2.59
6334 6664 4.729227 TGGTGTATTTCAGCGATAGACA 57.271 40.909 0.00 0.00 46.24 3.41
6335 6665 5.079689 TGGTGTATTTCAGCGATAGACAA 57.920 39.130 0.00 0.00 46.24 3.18
6336 6666 4.868171 TGGTGTATTTCAGCGATAGACAAC 59.132 41.667 0.00 5.41 46.24 3.32
6337 6667 5.109903 GGTGTATTTCAGCGATAGACAACT 58.890 41.667 0.00 0.00 34.84 3.16
6338 6668 6.127563 TGGTGTATTTCAGCGATAGACAACTA 60.128 38.462 10.87 0.00 46.24 2.24
6339 6669 6.198591 GGTGTATTTCAGCGATAGACAACTAC 59.801 42.308 0.00 0.00 34.84 2.73
6340 6670 6.973474 GTGTATTTCAGCGATAGACAACTACT 59.027 38.462 0.00 0.00 39.76 2.57
6341 6671 8.127327 GTGTATTTCAGCGATAGACAACTACTA 58.873 37.037 0.00 0.00 39.76 1.82
6342 6672 8.847196 TGTATTTCAGCGATAGACAACTACTAT 58.153 33.333 0.00 0.00 39.76 2.12
6343 6673 9.680315 GTATTTCAGCGATAGACAACTACTATT 57.320 33.333 0.00 0.00 39.76 1.73
6344 6674 7.987268 TTTCAGCGATAGACAACTACTATTG 57.013 36.000 0.00 0.00 35.80 1.90
6345 6675 6.694877 TCAGCGATAGACAACTACTATTGT 57.305 37.500 0.00 0.00 45.52 2.71
6353 6683 3.585862 ACAACTACTATTGTCAGCACCG 58.414 45.455 0.00 0.00 38.44 4.94
6354 6684 3.257375 ACAACTACTATTGTCAGCACCGA 59.743 43.478 0.00 0.00 38.44 4.69
6355 6685 4.242475 CAACTACTATTGTCAGCACCGAA 58.758 43.478 0.00 0.00 0.00 4.30
6356 6686 3.846360 ACTACTATTGTCAGCACCGAAC 58.154 45.455 0.00 0.00 0.00 3.95
6357 6687 3.510360 ACTACTATTGTCAGCACCGAACT 59.490 43.478 0.00 0.00 0.00 3.01
6358 6688 2.960819 ACTATTGTCAGCACCGAACTC 58.039 47.619 0.00 0.00 0.00 3.01
6359 6689 2.271800 CTATTGTCAGCACCGAACTCC 58.728 52.381 0.00 0.00 0.00 3.85
6360 6690 0.687354 ATTGTCAGCACCGAACTCCT 59.313 50.000 0.00 0.00 0.00 3.69
6361 6691 1.334160 TTGTCAGCACCGAACTCCTA 58.666 50.000 0.00 0.00 0.00 2.94
6362 6692 1.557099 TGTCAGCACCGAACTCCTAT 58.443 50.000 0.00 0.00 0.00 2.57
6363 6693 1.204704 TGTCAGCACCGAACTCCTATG 59.795 52.381 0.00 0.00 0.00 2.23
6364 6694 1.204941 GTCAGCACCGAACTCCTATGT 59.795 52.381 0.00 0.00 0.00 2.29
6365 6695 1.899814 TCAGCACCGAACTCCTATGTT 59.100 47.619 0.00 0.00 0.00 2.71
6366 6696 3.093814 TCAGCACCGAACTCCTATGTTA 58.906 45.455 0.00 0.00 0.00 2.41
6367 6697 3.130516 TCAGCACCGAACTCCTATGTTAG 59.869 47.826 0.00 0.00 0.00 2.34
6369 6699 2.822764 CACCGAACTCCTATGTTAGGC 58.177 52.381 6.47 0.00 45.82 3.93
6370 6700 2.431057 CACCGAACTCCTATGTTAGGCT 59.569 50.000 6.47 0.00 45.82 4.58
6371 6701 2.694109 ACCGAACTCCTATGTTAGGCTC 59.306 50.000 0.00 0.00 45.82 4.70
6372 6702 2.036089 CCGAACTCCTATGTTAGGCTCC 59.964 54.545 0.00 0.00 45.82 4.70
6373 6703 2.693591 CGAACTCCTATGTTAGGCTCCA 59.306 50.000 0.00 0.00 45.82 3.86
6374 6704 3.132289 CGAACTCCTATGTTAGGCTCCAA 59.868 47.826 0.00 0.00 45.82 3.53
6375 6705 4.382685 CGAACTCCTATGTTAGGCTCCAAA 60.383 45.833 0.00 0.00 45.82 3.28
6376 6706 4.489306 ACTCCTATGTTAGGCTCCAAAC 57.511 45.455 0.00 0.00 45.82 2.93
6377 6707 3.200165 ACTCCTATGTTAGGCTCCAAACC 59.800 47.826 0.00 0.00 45.82 3.27
6378 6708 3.456277 CTCCTATGTTAGGCTCCAAACCT 59.544 47.826 0.00 0.00 45.82 3.50
6379 6709 4.627015 TCCTATGTTAGGCTCCAAACCTA 58.373 43.478 0.00 0.00 45.82 3.08
6380 6710 5.224441 TCCTATGTTAGGCTCCAAACCTAT 58.776 41.667 0.00 0.00 45.82 2.57
6381 6711 5.307196 TCCTATGTTAGGCTCCAAACCTATC 59.693 44.000 0.00 0.00 45.82 2.08
6382 6712 3.926058 TGTTAGGCTCCAAACCTATCC 57.074 47.619 0.00 0.00 39.51 2.59
6383 6713 2.508300 TGTTAGGCTCCAAACCTATCCC 59.492 50.000 0.00 0.00 39.51 3.85
6384 6714 2.508300 GTTAGGCTCCAAACCTATCCCA 59.492 50.000 0.00 0.00 39.51 4.37
6385 6715 1.681229 AGGCTCCAAACCTATCCCAA 58.319 50.000 0.00 0.00 35.10 4.12
6386 6716 1.566231 AGGCTCCAAACCTATCCCAAG 59.434 52.381 0.00 0.00 35.10 3.61
6387 6717 1.393603 GCTCCAAACCTATCCCAAGC 58.606 55.000 0.00 0.00 0.00 4.01
6388 6718 2.024306 GCTCCAAACCTATCCCAAGCC 61.024 57.143 0.00 0.00 0.00 4.35
6389 6719 0.629058 TCCAAACCTATCCCAAGCCC 59.371 55.000 0.00 0.00 0.00 5.19
6390 6720 0.334676 CCAAACCTATCCCAAGCCCA 59.665 55.000 0.00 0.00 0.00 5.36
6391 6721 1.474330 CAAACCTATCCCAAGCCCAC 58.526 55.000 0.00 0.00 0.00 4.61
6392 6722 1.005924 CAAACCTATCCCAAGCCCACT 59.994 52.381 0.00 0.00 0.00 4.00
6393 6723 1.382914 AACCTATCCCAAGCCCACTT 58.617 50.000 0.00 0.00 36.19 3.16
6405 6735 3.558674 CCCACTTGGCCACTTCTAG 57.441 57.895 3.88 1.25 0.00 2.43
6406 6736 0.678048 CCCACTTGGCCACTTCTAGC 60.678 60.000 3.88 0.00 0.00 3.42
6407 6737 0.326264 CCACTTGGCCACTTCTAGCT 59.674 55.000 3.88 0.00 0.00 3.32
6408 6738 1.677217 CCACTTGGCCACTTCTAGCTC 60.677 57.143 3.88 0.00 0.00 4.09
6409 6739 1.277557 CACTTGGCCACTTCTAGCTCT 59.722 52.381 3.88 0.00 0.00 4.09
6410 6740 1.552792 ACTTGGCCACTTCTAGCTCTC 59.447 52.381 3.88 0.00 0.00 3.20
6411 6741 0.905357 TTGGCCACTTCTAGCTCTCC 59.095 55.000 3.88 0.00 0.00 3.71
6412 6742 1.323271 TGGCCACTTCTAGCTCTCCG 61.323 60.000 0.00 0.00 0.00 4.63
6413 6743 1.324005 GGCCACTTCTAGCTCTCCGT 61.324 60.000 0.00 0.00 0.00 4.69
6414 6744 0.533032 GCCACTTCTAGCTCTCCGTT 59.467 55.000 0.00 0.00 0.00 4.44
6415 6745 1.066787 GCCACTTCTAGCTCTCCGTTT 60.067 52.381 0.00 0.00 0.00 3.60
6416 6746 2.611518 CCACTTCTAGCTCTCCGTTTG 58.388 52.381 0.00 0.00 0.00 2.93
6417 6747 2.028930 CCACTTCTAGCTCTCCGTTTGT 60.029 50.000 0.00 0.00 0.00 2.83
6418 6748 3.192844 CCACTTCTAGCTCTCCGTTTGTA 59.807 47.826 0.00 0.00 0.00 2.41
6419 6749 4.142138 CCACTTCTAGCTCTCCGTTTGTAT 60.142 45.833 0.00 0.00 0.00 2.29
6420 6750 5.411781 CACTTCTAGCTCTCCGTTTGTATT 58.588 41.667 0.00 0.00 0.00 1.89
6421 6751 5.869888 CACTTCTAGCTCTCCGTTTGTATTT 59.130 40.000 0.00 0.00 0.00 1.40
6422 6752 7.033791 CACTTCTAGCTCTCCGTTTGTATTTA 58.966 38.462 0.00 0.00 0.00 1.40
6423 6753 7.544566 CACTTCTAGCTCTCCGTTTGTATTTAA 59.455 37.037 0.00 0.00 0.00 1.52
6424 6754 8.092687 ACTTCTAGCTCTCCGTTTGTATTTAAA 58.907 33.333 0.00 0.00 0.00 1.52
6425 6755 7.823149 TCTAGCTCTCCGTTTGTATTTAAAC 57.177 36.000 0.00 0.00 37.23 2.01
6426 6756 7.609056 TCTAGCTCTCCGTTTGTATTTAAACT 58.391 34.615 0.00 0.00 38.17 2.66
6427 6757 8.742777 TCTAGCTCTCCGTTTGTATTTAAACTA 58.257 33.333 0.00 0.00 38.17 2.24
6428 6758 9.362539 CTAGCTCTCCGTTTGTATTTAAACTAA 57.637 33.333 0.00 0.00 38.17 2.24
6429 6759 8.026341 AGCTCTCCGTTTGTATTTAAACTAAC 57.974 34.615 0.00 0.00 38.17 2.34
6430 6760 7.876582 AGCTCTCCGTTTGTATTTAAACTAACT 59.123 33.333 0.00 0.00 38.17 2.24
6431 6761 8.167345 GCTCTCCGTTTGTATTTAAACTAACTC 58.833 37.037 0.00 0.00 38.17 3.01
6432 6762 9.420551 CTCTCCGTTTGTATTTAAACTAACTCT 57.579 33.333 0.00 0.00 38.17 3.24
6435 6765 9.143631 TCCGTTTGTATTTAAACTAACTCTAGC 57.856 33.333 0.00 0.00 38.17 3.42
6436 6766 8.385858 CCGTTTGTATTTAAACTAACTCTAGCC 58.614 37.037 0.00 0.00 38.17 3.93
6437 6767 8.385858 CGTTTGTATTTAAACTAACTCTAGCCC 58.614 37.037 0.00 0.00 38.17 5.19
6438 6768 8.385858 GTTTGTATTTAAACTAACTCTAGCCCG 58.614 37.037 0.00 0.00 37.52 6.13
6439 6769 6.576185 TGTATTTAAACTAACTCTAGCCCGG 58.424 40.000 0.00 0.00 0.00 5.73
6440 6770 5.945144 ATTTAAACTAACTCTAGCCCGGA 57.055 39.130 0.73 0.00 0.00 5.14
6441 6771 5.945144 TTTAAACTAACTCTAGCCCGGAT 57.055 39.130 0.73 0.00 0.00 4.18
6442 6772 3.821421 AAACTAACTCTAGCCCGGATG 57.179 47.619 0.73 0.00 0.00 3.51
6443 6773 1.705873 ACTAACTCTAGCCCGGATGG 58.294 55.000 0.73 0.00 37.09 3.51
6488 6818 4.379302 AAGATAAATCTCCCCATCAGCC 57.621 45.455 0.00 0.00 35.76 4.85
6490 6820 3.073650 AGATAAATCTCCCCATCAGCCAC 59.926 47.826 0.00 0.00 29.30 5.01
6491 6821 1.002069 AAATCTCCCCATCAGCCACA 58.998 50.000 0.00 0.00 0.00 4.17
6492 6822 1.002069 AATCTCCCCATCAGCCACAA 58.998 50.000 0.00 0.00 0.00 3.33
6493 6823 0.257039 ATCTCCCCATCAGCCACAAC 59.743 55.000 0.00 0.00 0.00 3.32
6494 6824 1.746615 CTCCCCATCAGCCACAACG 60.747 63.158 0.00 0.00 0.00 4.10
6495 6825 2.184020 CTCCCCATCAGCCACAACGA 62.184 60.000 0.00 0.00 0.00 3.85
6496 6826 1.077501 CCCCATCAGCCACAACGAT 60.078 57.895 0.00 0.00 0.00 3.73
6498 6828 1.097547 CCCATCAGCCACAACGATCC 61.098 60.000 0.00 0.00 0.00 3.36
6501 6831 1.274703 ATCAGCCACAACGATCCCCT 61.275 55.000 0.00 0.00 0.00 4.79
6504 6834 2.040544 GCCACAACGATCCCCTGTG 61.041 63.158 8.73 8.73 40.13 3.66
6505 6835 1.676968 CCACAACGATCCCCTGTGA 59.323 57.895 14.83 0.00 42.48 3.58
6506 6836 0.673644 CCACAACGATCCCCTGTGAC 60.674 60.000 14.83 0.00 42.48 3.67
6507 6837 0.673644 CACAACGATCCCCTGTGACC 60.674 60.000 9.74 0.00 42.48 4.02
6508 6838 1.125093 ACAACGATCCCCTGTGACCA 61.125 55.000 0.00 0.00 0.00 4.02
6509 6839 0.036164 CAACGATCCCCTGTGACCAA 59.964 55.000 0.00 0.00 0.00 3.67
6510 6840 0.991920 AACGATCCCCTGTGACCAAT 59.008 50.000 0.00 0.00 0.00 3.16
6512 6842 1.065418 ACGATCCCCTGTGACCAATTC 60.065 52.381 0.00 0.00 0.00 2.17
6514 6844 1.566231 GATCCCCTGTGACCAATTCCT 59.434 52.381 0.00 0.00 0.00 3.36
6515 6845 0.991920 TCCCCTGTGACCAATTCCTC 59.008 55.000 0.00 0.00 0.00 3.71
6518 6848 0.392998 CCTGTGACCAATTCCTCCCG 60.393 60.000 0.00 0.00 0.00 5.14
6519 6849 0.613260 CTGTGACCAATTCCTCCCGA 59.387 55.000 0.00 0.00 0.00 5.14
6521 6851 0.613777 GTGACCAATTCCTCCCGAGT 59.386 55.000 0.00 0.00 0.00 4.18
6522 6852 0.902531 TGACCAATTCCTCCCGAGTC 59.097 55.000 0.00 0.00 0.00 3.36
6523 6853 1.196012 GACCAATTCCTCCCGAGTCT 58.804 55.000 0.00 0.00 0.00 3.24
6524 6854 1.137282 GACCAATTCCTCCCGAGTCTC 59.863 57.143 0.00 0.00 0.00 3.36
6525 6855 1.195115 CCAATTCCTCCCGAGTCTCA 58.805 55.000 0.00 0.00 0.00 3.27
6526 6856 1.555075 CCAATTCCTCCCGAGTCTCAA 59.445 52.381 0.00 0.00 0.00 3.02
6527 6857 2.027192 CCAATTCCTCCCGAGTCTCAAA 60.027 50.000 0.00 0.00 0.00 2.69
6528 6858 3.003480 CAATTCCTCCCGAGTCTCAAAC 58.997 50.000 0.00 0.00 0.00 2.93
6529 6859 2.011122 TTCCTCCCGAGTCTCAAACT 57.989 50.000 0.00 0.00 42.42 2.66
6539 6869 1.700186 AGTCTCAAACTCCCAAGTCCC 59.300 52.381 0.00 0.00 33.48 4.46
6541 6871 0.685097 CTCAAACTCCCAAGTCCCGA 59.315 55.000 0.00 0.00 33.48 5.14
6542 6872 1.279271 CTCAAACTCCCAAGTCCCGAT 59.721 52.381 0.00 0.00 33.48 4.18
6543 6873 1.278127 TCAAACTCCCAAGTCCCGATC 59.722 52.381 0.00 0.00 33.48 3.69
6548 6878 1.212935 CTCCCAAGTCCCGATCCATTT 59.787 52.381 0.00 0.00 0.00 2.32
6549 6879 1.211949 TCCCAAGTCCCGATCCATTTC 59.788 52.381 0.00 0.00 0.00 2.17
6551 6881 2.423373 CCCAAGTCCCGATCCATTTCAT 60.423 50.000 0.00 0.00 0.00 2.57
6553 6883 3.316308 CCAAGTCCCGATCCATTTCATTC 59.684 47.826 0.00 0.00 0.00 2.67
6556 6886 3.713764 AGTCCCGATCCATTTCATTCTCT 59.286 43.478 0.00 0.00 0.00 3.10
6557 6887 4.164988 AGTCCCGATCCATTTCATTCTCTT 59.835 41.667 0.00 0.00 0.00 2.85
6558 6888 4.513318 GTCCCGATCCATTTCATTCTCTTC 59.487 45.833 0.00 0.00 0.00 2.87
6559 6889 3.817647 CCCGATCCATTTCATTCTCTTCC 59.182 47.826 0.00 0.00 0.00 3.46
6560 6890 4.445448 CCCGATCCATTTCATTCTCTTCCT 60.445 45.833 0.00 0.00 0.00 3.36
6561 6891 4.754114 CCGATCCATTTCATTCTCTTCCTC 59.246 45.833 0.00 0.00 0.00 3.71
6562 6892 4.754114 CGATCCATTTCATTCTCTTCCTCC 59.246 45.833 0.00 0.00 0.00 4.30
6565 6895 3.873952 CCATTTCATTCTCTTCCTCCGAC 59.126 47.826 0.00 0.00 0.00 4.79
6566 6896 3.611766 TTTCATTCTCTTCCTCCGACC 57.388 47.619 0.00 0.00 0.00 4.79
6567 6897 1.486211 TCATTCTCTTCCTCCGACCC 58.514 55.000 0.00 0.00 0.00 4.46
6568 6898 0.466124 CATTCTCTTCCTCCGACCCC 59.534 60.000 0.00 0.00 0.00 4.95
6569 6899 0.691413 ATTCTCTTCCTCCGACCCCC 60.691 60.000 0.00 0.00 0.00 5.40
6590 6920 4.527944 CCCTTTCCACCTATTCTTCTTCC 58.472 47.826 0.00 0.00 0.00 3.46
6602 6932 2.436417 TCTTCTTCCGCCTCCAAATTG 58.564 47.619 0.00 0.00 0.00 2.32
6946 7446 3.081804 CGGACCTACATTGGAAAAGCTT 58.918 45.455 0.00 0.00 0.00 3.74
7060 7560 2.897326 GGGGTGCATTGGGGATAATAAC 59.103 50.000 0.00 0.00 0.00 1.89
7177 7680 1.726853 ACATTGTGAAGCTCGTAGGC 58.273 50.000 0.00 0.00 0.00 3.93
7875 8384 9.846248 GCAGTAAGTTGATGAATTTTACAGAAT 57.154 29.630 5.54 0.00 0.00 2.40
7907 8416 8.356533 AGTATTATGCATTTATTTGCTTGTGC 57.643 30.769 3.54 0.00 43.18 4.57
7991 8500 9.868277 CACATATGGTAGATTTCCTTAGAGATC 57.132 37.037 7.80 0.00 34.54 2.75
8133 8649 7.989416 AATTTCTTAAGTTATCGTGGAACCA 57.011 32.000 1.63 0.00 0.00 3.67
8218 8734 2.308570 TGTCCATATGCAACCAAGTCCT 59.691 45.455 0.00 0.00 0.00 3.85
8283 8799 7.846644 TTAACCCATATGTAAAAGTGGTACG 57.153 36.000 1.24 0.00 0.00 3.67
8308 8824 9.385902 CGATAATAGCACGAAATCATCAAAAAT 57.614 29.630 0.00 0.00 0.00 1.82
8338 8854 5.545658 ATGTTTGTGACGTATCAACATCC 57.454 39.130 8.37 0.00 36.31 3.51
8354 8870 4.592485 ACATCCTCGAGCTTAATACCTG 57.408 45.455 6.99 0.00 0.00 4.00
8449 8965 9.002600 TGATCAAATGATATAAAGTATTGCGCT 57.997 29.630 9.73 0.00 34.37 5.92
8512 9028 8.760103 TTTGACATGAAAACAATGATACATGG 57.240 30.769 0.00 0.00 39.20 3.66
8566 9082 8.873830 CGAGAATAAAGATGCTAAAGAAAGTGA 58.126 33.333 0.00 0.00 0.00 3.41
8667 9183 5.763204 CCCTCCAATAAAGAGCGCTTTTATA 59.237 40.000 24.64 16.04 41.43 0.98
8759 9275 5.173664 TGCACACAATCATCAAACAAACAA 58.826 33.333 0.00 0.00 0.00 2.83
8761 9277 6.982724 TGCACACAATCATCAAACAAACAATA 59.017 30.769 0.00 0.00 0.00 1.90
8790 9307 8.558700 ACAAAGAATACAAAATGACAAATTGGC 58.441 29.630 0.00 0.00 0.00 4.52
8833 9350 3.702330 TGAAACTATGCCTATGTCGACG 58.298 45.455 11.62 0.00 0.00 5.12
8894 9411 0.118346 TGGGTAAAGGCCTCTCTGGA 59.882 55.000 5.23 0.00 38.35 3.86
8909 9426 4.767255 GGACACCTGCTCCAGCCG 62.767 72.222 0.00 0.00 41.18 5.52
8919 9436 1.219124 CTCCAGCCGCATACACACT 59.781 57.895 0.00 0.00 0.00 3.55
8930 9447 2.293122 GCATACACACTGCCTTGAACAA 59.707 45.455 0.00 0.00 33.44 2.83
8940 9457 3.391965 TGCCTTGAACAACAATTGATGC 58.608 40.909 13.59 0.00 37.88 3.91
8942 9459 3.676646 GCCTTGAACAACAATTGATGCTC 59.323 43.478 13.59 12.09 37.88 4.26
8974 9491 1.736681 GAGTAGACCACGTACGAAGCT 59.263 52.381 24.41 14.86 0.00 3.74
8987 9504 1.001048 ACGAAGCTAGTGCGTACAACA 60.001 47.619 6.38 0.00 45.42 3.33
9000 9517 4.152759 TGCGTACAACAGTAAATAACCTGC 59.847 41.667 0.00 0.00 0.00 4.85
9001 9518 4.722908 GCGTACAACAGTAAATAACCTGCG 60.723 45.833 0.00 0.00 0.00 5.18
9010 9527 5.229469 CAGTAAATAACCTGCGTACGAGAAG 59.771 44.000 21.65 12.44 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
276 280 2.363711 GATGATCGGCAGGCCACGTA 62.364 60.000 5.01 0.00 35.37 3.57
333 337 3.894547 CTACGCAGCGGTTTGGGGT 62.895 63.158 21.15 0.00 35.52 4.95
720 728 7.476540 AATTTAGGACAAGTAATTTGGGACC 57.523 36.000 0.00 0.00 41.25 4.46
956 964 7.603404 TCAAGTGTTTAAATAGCTAAGGCGTTA 59.397 33.333 0.00 0.00 44.37 3.18
1037 1046 0.308376 GTCCTCGACATCGCTACTCC 59.692 60.000 0.00 0.00 39.60 3.85
1341 1350 1.289066 GAGTCGTAGCACTGCCACA 59.711 57.895 0.00 0.00 0.00 4.17
1921 2128 2.361992 TTGCCCTCGTAGCCTCGA 60.362 61.111 1.20 1.20 38.19 4.04
2030 2237 8.488668 TCTTATGTTAATTTACAGAGGGGGTAC 58.511 37.037 3.44 0.00 0.00 3.34
2034 2241 6.202954 CGCTCTTATGTTAATTTACAGAGGGG 59.797 42.308 15.59 8.49 32.23 4.79
2071 2278 9.601217 AACATAAGAGCGTTTAGATCACTATTT 57.399 29.630 0.00 0.00 37.82 1.40
2075 2282 9.601217 AATTAACATAAGAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 37.82 3.41
2083 2290 9.216117 ACTCTGTAAATTAACATAAGAGCGTTT 57.784 29.630 0.00 0.00 0.00 3.60
2084 2291 8.656849 CACTCTGTAAATTAACATAAGAGCGTT 58.343 33.333 0.00 0.00 0.00 4.84
2085 2292 8.033038 TCACTCTGTAAATTAACATAAGAGCGT 58.967 33.333 0.00 0.00 0.00 5.07
2086 2293 8.407457 TCACTCTGTAAATTAACATAAGAGCG 57.593 34.615 0.00 0.00 0.00 5.03
2087 2294 9.372369 ACTCACTCTGTAAATTAACATAAGAGC 57.628 33.333 0.00 0.00 0.00 4.09
2109 2316 6.691754 TTGCAAGAAATTGTGAAGTACTCA 57.308 33.333 0.00 0.00 0.00 3.41
2169 2376 1.339151 ACAGAAGGGAAGGCATTCGAC 60.339 52.381 4.84 0.59 36.19 4.20
2170 2377 0.984230 ACAGAAGGGAAGGCATTCGA 59.016 50.000 4.84 0.00 36.19 3.71
2250 2457 0.533308 AAGGGAACGTACGCTTTGCA 60.533 50.000 16.72 0.00 39.39 4.08
2438 2647 5.099484 AGACGAATTTAACGGTGAAAACC 57.901 39.130 0.00 0.00 34.93 3.27
2472 2681 3.761897 TCAACATGGGGTCTACTTTTGG 58.238 45.455 0.00 0.00 0.00 3.28
2478 2687 5.236478 CGAAACATATCAACATGGGGTCTAC 59.764 44.000 0.00 0.00 0.00 2.59
3061 3292 0.535553 GGTGTAAGTCAAACCCGCCA 60.536 55.000 0.00 0.00 0.00 5.69
3208 3439 8.947055 ACAAATTTAAAAACAGCTCACTCAAT 57.053 26.923 0.00 0.00 0.00 2.57
3278 3509 8.491045 AAGAATAGGGATTTTGGTTCTTTCAA 57.509 30.769 0.00 0.00 33.50 2.69
3361 3593 9.855361 CATGCTCACGAAAAGATAAAACTATAG 57.145 33.333 0.00 0.00 0.00 1.31
3380 3612 9.104965 GTTACTAATAACAACATACCATGCTCA 57.895 33.333 0.00 0.00 40.49 4.26
3843 4113 7.437862 TGAAAAACTGCCATGCTAAACTTTAAG 59.562 33.333 0.00 0.00 0.00 1.85
3897 4167 5.351189 AGAAGAAATGCCAACAACAACAAAC 59.649 36.000 0.00 0.00 0.00 2.93
4246 4518 7.095439 GCTAGATGTTGATAACTTGATGGCTAC 60.095 40.741 0.00 0.00 0.00 3.58
4567 4842 4.380023 GGCTACGACAAATGGTGCAATTTA 60.380 41.667 0.00 0.00 0.00 1.40
4589 4864 4.730949 TGTTTCCGTGAGAACTATAGGG 57.269 45.455 4.43 0.00 32.95 3.53
4618 4893 4.758674 CAGACTCAAAAAGAAGCATGGAGA 59.241 41.667 0.00 0.00 0.00 3.71
4639 4914 7.383029 TCTTTAGAATTGCATGCAAAAGTTCAG 59.617 33.333 34.84 23.88 39.55 3.02
4696 4974 2.489329 GGTGCATTCATAGTGTGTGCTT 59.511 45.455 0.00 0.00 36.78 3.91
4728 5006 6.756074 CACCACAGAAAATGCAGAAAAACTTA 59.244 34.615 0.00 0.00 0.00 2.24
4791 5069 8.470002 GTCAAGGCATATTTAATCCAAGAAACT 58.530 33.333 0.00 0.00 0.00 2.66
5172 5458 7.607607 TCAGCAGCAGAAGAAGAAAATGTATTA 59.392 33.333 0.00 0.00 0.00 0.98
5183 5469 2.763933 TCAACTCAGCAGCAGAAGAAG 58.236 47.619 0.00 0.00 0.00 2.85
5191 5478 0.518636 TTGCGATTCAACTCAGCAGC 59.481 50.000 0.00 0.00 39.11 5.25
5473 5801 6.061022 TGGTTAGAATTGCCTAGATTCACA 57.939 37.500 5.67 0.00 36.26 3.58
5537 5865 7.690952 AAACATACTTTAGGTTTCCGCATTA 57.309 32.000 0.00 0.00 38.12 1.90
5543 5871 9.059260 TGTCACTAAAACATACTTTAGGTTTCC 57.941 33.333 7.74 0.00 41.22 3.13
5546 5874 8.843262 GGTTGTCACTAAAACATACTTTAGGTT 58.157 33.333 7.74 0.00 41.34 3.50
5547 5875 7.172019 CGGTTGTCACTAAAACATACTTTAGGT 59.828 37.037 7.74 0.00 41.34 3.08
5548 5876 7.360607 CCGGTTGTCACTAAAACATACTTTAGG 60.361 40.741 0.00 0.00 41.34 2.69
5549 5877 7.385752 TCCGGTTGTCACTAAAACATACTTTAG 59.614 37.037 0.00 2.35 42.29 1.85
5550 5878 7.171337 GTCCGGTTGTCACTAAAACATACTTTA 59.829 37.037 0.00 0.00 0.00 1.85
5568 5898 2.880963 AACAAACCAATGTCCGGTTG 57.119 45.000 0.00 0.00 46.12 3.77
5623 5953 0.250597 GGCTGGGTCTTTGTAACCGT 60.251 55.000 0.00 0.00 37.69 4.83
5732 6062 9.892130 CAAGTTTATAAGGGTATGATATCTCCC 57.108 37.037 17.46 17.46 40.16 4.30
5739 6069 9.975218 AACAAGACAAGTTTATAAGGGTATGAT 57.025 29.630 0.00 0.00 0.00 2.45
5938 6268 1.135972 GCATGTTCTAGTGCAACACCG 60.136 52.381 0.00 0.00 41.43 4.94
6010 6340 5.930310 TTTCATCAAATTTTAGCGCATCG 57.070 34.783 11.47 0.00 0.00 3.84
6042 6372 3.531934 AGTTACCATACGTGCCCTAAC 57.468 47.619 0.00 0.00 0.00 2.34
6124 6454 7.038302 ACAGATGTTCTAAGAGACAACCCATTA 60.038 37.037 0.00 0.00 0.00 1.90
6173 6503 9.613428 CTCTTAATAACAATATCTCCCAACACA 57.387 33.333 0.00 0.00 0.00 3.72
6174 6504 9.057089 CCTCTTAATAACAATATCTCCCAACAC 57.943 37.037 0.00 0.00 0.00 3.32
6175 6505 8.778059 ACCTCTTAATAACAATATCTCCCAACA 58.222 33.333 0.00 0.00 0.00 3.33
6176 6506 9.274206 GACCTCTTAATAACAATATCTCCCAAC 57.726 37.037 0.00 0.00 0.00 3.77
6179 6509 9.660180 GATGACCTCTTAATAACAATATCTCCC 57.340 37.037 0.00 0.00 0.00 4.30
6211 6541 8.191446 AGAAAGAAAAACTTGCCTTCTCTTAAC 58.809 33.333 0.00 0.00 38.98 2.01
6212 6542 8.293699 AGAAAGAAAAACTTGCCTTCTCTTAA 57.706 30.769 0.00 0.00 38.98 1.85
6220 6550 3.068165 CCCGAAGAAAGAAAAACTTGCCT 59.932 43.478 0.00 0.00 38.98 4.75
6222 6552 4.041740 ACCCGAAGAAAGAAAAACTTGC 57.958 40.909 0.00 0.00 38.98 4.01
6224 6554 5.886474 AGAGAACCCGAAGAAAGAAAAACTT 59.114 36.000 0.00 0.00 40.98 2.66
6225 6555 5.437946 AGAGAACCCGAAGAAAGAAAAACT 58.562 37.500 0.00 0.00 0.00 2.66
6226 6556 5.752892 AGAGAACCCGAAGAAAGAAAAAC 57.247 39.130 0.00 0.00 0.00 2.43
6227 6557 6.769134 AAAGAGAACCCGAAGAAAGAAAAA 57.231 33.333 0.00 0.00 0.00 1.94
6228 6558 6.769134 AAAAGAGAACCCGAAGAAAGAAAA 57.231 33.333 0.00 0.00 0.00 2.29
6230 6560 5.449999 GCAAAAAGAGAACCCGAAGAAAGAA 60.450 40.000 0.00 0.00 0.00 2.52
6231 6561 4.036380 GCAAAAAGAGAACCCGAAGAAAGA 59.964 41.667 0.00 0.00 0.00 2.52
6232 6562 4.202010 TGCAAAAAGAGAACCCGAAGAAAG 60.202 41.667 0.00 0.00 0.00 2.62
6233 6563 3.697045 TGCAAAAAGAGAACCCGAAGAAA 59.303 39.130 0.00 0.00 0.00 2.52
6234 6564 3.066203 GTGCAAAAAGAGAACCCGAAGAA 59.934 43.478 0.00 0.00 0.00 2.52
6235 6565 2.616842 GTGCAAAAAGAGAACCCGAAGA 59.383 45.455 0.00 0.00 0.00 2.87
6236 6566 2.287608 GGTGCAAAAAGAGAACCCGAAG 60.288 50.000 0.00 0.00 0.00 3.79
6237 6567 1.679153 GGTGCAAAAAGAGAACCCGAA 59.321 47.619 0.00 0.00 0.00 4.30
6238 6568 1.133915 AGGTGCAAAAAGAGAACCCGA 60.134 47.619 0.00 0.00 0.00 5.14
6239 6569 1.266989 GAGGTGCAAAAAGAGAACCCG 59.733 52.381 0.00 0.00 0.00 5.28
6240 6570 2.306847 TGAGGTGCAAAAAGAGAACCC 58.693 47.619 0.00 0.00 0.00 4.11
6241 6571 4.590850 ATTGAGGTGCAAAAAGAGAACC 57.409 40.909 0.00 0.00 40.48 3.62
6242 6572 5.631096 GCTAATTGAGGTGCAAAAAGAGAAC 59.369 40.000 0.00 0.00 40.48 3.01
6243 6573 5.278957 GGCTAATTGAGGTGCAAAAAGAGAA 60.279 40.000 0.00 0.00 40.48 2.87
6244 6574 4.218417 GGCTAATTGAGGTGCAAAAAGAGA 59.782 41.667 0.00 0.00 40.48 3.10
6245 6575 4.488879 GGCTAATTGAGGTGCAAAAAGAG 58.511 43.478 0.00 0.00 40.48 2.85
6246 6576 3.258123 GGGCTAATTGAGGTGCAAAAAGA 59.742 43.478 0.00 0.00 40.48 2.52
6247 6577 3.006752 TGGGCTAATTGAGGTGCAAAAAG 59.993 43.478 0.00 0.00 40.48 2.27
6248 6578 2.968574 TGGGCTAATTGAGGTGCAAAAA 59.031 40.909 0.00 0.00 40.48 1.94
6249 6579 2.562298 CTGGGCTAATTGAGGTGCAAAA 59.438 45.455 0.00 0.00 40.48 2.44
6250 6580 2.170166 CTGGGCTAATTGAGGTGCAAA 58.830 47.619 0.00 0.00 40.48 3.68
6251 6581 1.616725 CCTGGGCTAATTGAGGTGCAA 60.617 52.381 0.00 0.00 41.53 4.08
6252 6582 0.034186 CCTGGGCTAATTGAGGTGCA 60.034 55.000 0.00 0.00 0.00 4.57
6253 6583 0.034089 ACCTGGGCTAATTGAGGTGC 60.034 55.000 0.00 0.00 37.44 5.01
6254 6584 3.054361 AGTTACCTGGGCTAATTGAGGTG 60.054 47.826 0.00 0.00 39.25 4.00
6255 6585 3.054361 CAGTTACCTGGGCTAATTGAGGT 60.054 47.826 0.00 0.00 41.77 3.85
6256 6586 3.054361 ACAGTTACCTGGGCTAATTGAGG 60.054 47.826 0.00 0.00 43.36 3.86
6257 6587 4.080863 AGACAGTTACCTGGGCTAATTGAG 60.081 45.833 0.00 0.00 43.36 3.02
6258 6588 3.844211 AGACAGTTACCTGGGCTAATTGA 59.156 43.478 0.00 0.00 43.36 2.57
6259 6589 4.222124 AGACAGTTACCTGGGCTAATTG 57.778 45.455 0.00 0.00 43.36 2.32
6260 6590 4.929146 AAGACAGTTACCTGGGCTAATT 57.071 40.909 0.00 0.00 43.36 1.40
6261 6591 5.278061 TCTAAGACAGTTACCTGGGCTAAT 58.722 41.667 0.00 0.00 43.36 1.73
6262 6592 4.680407 TCTAAGACAGTTACCTGGGCTAA 58.320 43.478 0.00 0.00 43.36 3.09
6263 6593 4.326600 TCTAAGACAGTTACCTGGGCTA 57.673 45.455 0.00 0.00 43.36 3.93
6264 6594 3.185880 TCTAAGACAGTTACCTGGGCT 57.814 47.619 0.00 0.00 43.36 5.19
6265 6595 3.975168 TTCTAAGACAGTTACCTGGGC 57.025 47.619 0.00 0.00 43.36 5.36
6266 6596 5.128827 TGCTATTCTAAGACAGTTACCTGGG 59.871 44.000 0.00 0.00 43.36 4.45
6267 6597 6.043411 GTGCTATTCTAAGACAGTTACCTGG 58.957 44.000 0.00 0.00 43.36 4.45
6268 6598 6.043411 GGTGCTATTCTAAGACAGTTACCTG 58.957 44.000 0.00 0.00 44.68 4.00
6269 6599 5.720041 TGGTGCTATTCTAAGACAGTTACCT 59.280 40.000 0.00 0.00 0.00 3.08
6270 6600 5.974108 TGGTGCTATTCTAAGACAGTTACC 58.026 41.667 0.00 0.00 0.00 2.85
6271 6601 7.549488 ACAATGGTGCTATTCTAAGACAGTTAC 59.451 37.037 0.00 0.00 0.00 2.50
6272 6602 7.620880 ACAATGGTGCTATTCTAAGACAGTTA 58.379 34.615 0.00 0.00 0.00 2.24
6273 6603 6.476378 ACAATGGTGCTATTCTAAGACAGTT 58.524 36.000 0.00 0.00 0.00 3.16
6274 6604 6.054860 ACAATGGTGCTATTCTAAGACAGT 57.945 37.500 0.00 0.00 0.00 3.55
6275 6605 7.041721 TGTACAATGGTGCTATTCTAAGACAG 58.958 38.462 0.00 0.00 0.00 3.51
6276 6606 6.941857 TGTACAATGGTGCTATTCTAAGACA 58.058 36.000 0.00 0.00 0.00 3.41
6277 6607 7.495934 ACATGTACAATGGTGCTATTCTAAGAC 59.504 37.037 0.00 0.00 0.00 3.01
6278 6608 7.564793 ACATGTACAATGGTGCTATTCTAAGA 58.435 34.615 0.00 0.00 0.00 2.10
6279 6609 7.041780 GGACATGTACAATGGTGCTATTCTAAG 60.042 40.741 2.19 0.00 0.00 2.18
6280 6610 6.765989 GGACATGTACAATGGTGCTATTCTAA 59.234 38.462 2.19 0.00 0.00 2.10
6281 6611 6.099701 AGGACATGTACAATGGTGCTATTCTA 59.900 38.462 11.55 0.00 29.77 2.10
6282 6612 5.104360 AGGACATGTACAATGGTGCTATTCT 60.104 40.000 11.55 0.00 29.77 2.40
6283 6613 5.126067 AGGACATGTACAATGGTGCTATTC 58.874 41.667 11.55 0.00 29.77 1.75
6284 6614 5.116084 AGGACATGTACAATGGTGCTATT 57.884 39.130 11.55 0.00 29.77 1.73
6285 6615 4.778213 AGGACATGTACAATGGTGCTAT 57.222 40.909 11.55 0.00 29.77 2.97
6286 6616 4.568072 AAGGACATGTACAATGGTGCTA 57.432 40.909 11.55 0.00 31.42 3.49
6287 6617 3.439857 AAGGACATGTACAATGGTGCT 57.560 42.857 11.55 11.96 33.11 4.40
6288 6618 5.125417 ACATTAAGGACATGTACAATGGTGC 59.875 40.000 19.86 4.37 32.88 5.01
6289 6619 6.757897 ACATTAAGGACATGTACAATGGTG 57.242 37.500 19.86 10.88 32.88 4.17
6290 6620 6.152661 CCAACATTAAGGACATGTACAATGGT 59.847 38.462 19.86 13.70 33.54 3.55
6291 6621 6.152661 ACCAACATTAAGGACATGTACAATGG 59.847 38.462 19.86 14.07 35.91 3.16
6292 6622 7.028962 CACCAACATTAAGGACATGTACAATG 58.971 38.462 16.05 16.05 33.54 2.82
6293 6623 6.719370 ACACCAACATTAAGGACATGTACAAT 59.281 34.615 11.55 0.00 33.54 2.71
6294 6624 6.065374 ACACCAACATTAAGGACATGTACAA 58.935 36.000 11.55 0.00 33.54 2.41
6295 6625 5.626142 ACACCAACATTAAGGACATGTACA 58.374 37.500 11.55 0.00 33.54 2.90
6296 6626 7.859325 ATACACCAACATTAAGGACATGTAC 57.141 36.000 0.00 0.00 33.54 2.90
6297 6627 8.871629 AAATACACCAACATTAAGGACATGTA 57.128 30.769 0.00 0.00 33.54 2.29
6298 6628 7.450014 TGAAATACACCAACATTAAGGACATGT 59.550 33.333 0.00 0.00 36.36 3.21
6299 6629 7.825681 TGAAATACACCAACATTAAGGACATG 58.174 34.615 0.00 0.00 0.00 3.21
6300 6630 7.362920 GCTGAAATACACCAACATTAAGGACAT 60.363 37.037 0.00 0.00 0.00 3.06
6301 6631 6.072175 GCTGAAATACACCAACATTAAGGACA 60.072 38.462 0.00 0.00 0.00 4.02
6302 6632 6.322491 GCTGAAATACACCAACATTAAGGAC 58.678 40.000 0.00 0.00 0.00 3.85
6303 6633 5.123186 CGCTGAAATACACCAACATTAAGGA 59.877 40.000 0.00 0.00 0.00 3.36
6304 6634 5.123186 TCGCTGAAATACACCAACATTAAGG 59.877 40.000 0.00 0.00 0.00 2.69
6305 6635 6.176975 TCGCTGAAATACACCAACATTAAG 57.823 37.500 0.00 0.00 0.00 1.85
6306 6636 6.751514 ATCGCTGAAATACACCAACATTAA 57.248 33.333 0.00 0.00 0.00 1.40
6307 6637 7.223971 GTCTATCGCTGAAATACACCAACATTA 59.776 37.037 0.00 0.00 0.00 1.90
6308 6638 6.037172 GTCTATCGCTGAAATACACCAACATT 59.963 38.462 0.00 0.00 0.00 2.71
6309 6639 5.523916 GTCTATCGCTGAAATACACCAACAT 59.476 40.000 0.00 0.00 0.00 2.71
6310 6640 4.868171 GTCTATCGCTGAAATACACCAACA 59.132 41.667 0.00 0.00 0.00 3.33
6311 6641 4.868171 TGTCTATCGCTGAAATACACCAAC 59.132 41.667 0.00 0.00 0.00 3.77
6312 6642 5.079689 TGTCTATCGCTGAAATACACCAA 57.920 39.130 0.00 0.00 0.00 3.67
6313 6643 4.729227 TGTCTATCGCTGAAATACACCA 57.271 40.909 0.00 0.00 0.00 4.17
6314 6644 5.109903 AGTTGTCTATCGCTGAAATACACC 58.890 41.667 0.00 0.00 0.00 4.16
6315 6645 6.973474 AGTAGTTGTCTATCGCTGAAATACAC 59.027 38.462 0.00 0.00 0.00 2.90
6316 6646 7.096884 AGTAGTTGTCTATCGCTGAAATACA 57.903 36.000 0.00 0.00 0.00 2.29
6317 6647 9.680315 AATAGTAGTTGTCTATCGCTGAAATAC 57.320 33.333 0.00 0.00 0.00 1.89
6318 6648 9.678941 CAATAGTAGTTGTCTATCGCTGAAATA 57.321 33.333 0.00 0.00 0.00 1.40
6319 6649 8.198109 ACAATAGTAGTTGTCTATCGCTGAAAT 58.802 33.333 0.00 0.00 37.80 2.17
6320 6650 7.544622 ACAATAGTAGTTGTCTATCGCTGAAA 58.455 34.615 0.00 0.00 37.80 2.69
6321 6651 7.096884 ACAATAGTAGTTGTCTATCGCTGAA 57.903 36.000 0.00 0.00 37.80 3.02
6322 6652 6.694877 ACAATAGTAGTTGTCTATCGCTGA 57.305 37.500 0.00 0.00 37.80 4.26
6332 6662 3.257375 TCGGTGCTGACAATAGTAGTTGT 59.743 43.478 0.00 0.00 44.53 3.32
6333 6663 3.845178 TCGGTGCTGACAATAGTAGTTG 58.155 45.455 0.00 0.00 35.25 3.16
6334 6664 4.021368 AGTTCGGTGCTGACAATAGTAGTT 60.021 41.667 0.00 0.00 0.00 2.24
6335 6665 3.510360 AGTTCGGTGCTGACAATAGTAGT 59.490 43.478 0.00 0.00 0.00 2.73
6336 6666 4.106197 GAGTTCGGTGCTGACAATAGTAG 58.894 47.826 0.00 0.00 0.00 2.57
6337 6667 3.119245 GGAGTTCGGTGCTGACAATAGTA 60.119 47.826 0.00 0.00 0.00 1.82
6338 6668 2.353803 GGAGTTCGGTGCTGACAATAGT 60.354 50.000 0.00 0.00 0.00 2.12
6339 6669 2.093973 AGGAGTTCGGTGCTGACAATAG 60.094 50.000 0.00 0.00 0.00 1.73
6340 6670 1.899814 AGGAGTTCGGTGCTGACAATA 59.100 47.619 0.00 0.00 0.00 1.90
6341 6671 0.687354 AGGAGTTCGGTGCTGACAAT 59.313 50.000 0.00 0.00 0.00 2.71
6342 6672 1.334160 TAGGAGTTCGGTGCTGACAA 58.666 50.000 0.00 0.00 0.00 3.18
6343 6673 1.204704 CATAGGAGTTCGGTGCTGACA 59.795 52.381 0.00 0.00 0.00 3.58
6344 6674 1.204941 ACATAGGAGTTCGGTGCTGAC 59.795 52.381 0.00 0.00 0.00 3.51
6345 6675 1.557099 ACATAGGAGTTCGGTGCTGA 58.443 50.000 0.00 0.00 0.00 4.26
6346 6676 2.386661 AACATAGGAGTTCGGTGCTG 57.613 50.000 0.00 0.00 0.00 4.41
6347 6677 3.802948 CTAACATAGGAGTTCGGTGCT 57.197 47.619 0.00 0.00 33.07 4.40
6359 6689 5.513267 GGGATAGGTTTGGAGCCTAACATAG 60.513 48.000 14.13 0.00 41.41 2.23
6360 6690 4.349930 GGGATAGGTTTGGAGCCTAACATA 59.650 45.833 14.13 11.96 41.41 2.29
6361 6691 3.138468 GGGATAGGTTTGGAGCCTAACAT 59.862 47.826 14.13 10.34 41.41 2.71
6362 6692 2.508300 GGGATAGGTTTGGAGCCTAACA 59.492 50.000 14.13 0.00 41.41 2.41
6363 6693 2.508300 TGGGATAGGTTTGGAGCCTAAC 59.492 50.000 5.45 5.45 41.41 2.34
6364 6694 2.853430 TGGGATAGGTTTGGAGCCTAA 58.147 47.619 0.00 0.00 41.41 2.69
6365 6695 2.579624 TGGGATAGGTTTGGAGCCTA 57.420 50.000 0.00 0.00 42.18 3.93
6366 6696 1.566231 CTTGGGATAGGTTTGGAGCCT 59.434 52.381 0.00 0.00 40.00 4.58
6367 6697 2.024306 GCTTGGGATAGGTTTGGAGCC 61.024 57.143 0.00 0.00 0.00 4.70
6368 6698 1.393603 GCTTGGGATAGGTTTGGAGC 58.606 55.000 0.00 0.00 0.00 4.70
6369 6699 1.410224 GGGCTTGGGATAGGTTTGGAG 60.410 57.143 0.00 0.00 0.00 3.86
6370 6700 0.629058 GGGCTTGGGATAGGTTTGGA 59.371 55.000 0.00 0.00 0.00 3.53
6371 6701 0.334676 TGGGCTTGGGATAGGTTTGG 59.665 55.000 0.00 0.00 0.00 3.28
6372 6702 1.005924 AGTGGGCTTGGGATAGGTTTG 59.994 52.381 0.00 0.00 0.00 2.93
6373 6703 1.382914 AGTGGGCTTGGGATAGGTTT 58.617 50.000 0.00 0.00 0.00 3.27
6374 6704 1.005924 CAAGTGGGCTTGGGATAGGTT 59.994 52.381 0.00 0.00 46.17 3.50
6375 6705 0.625849 CAAGTGGGCTTGGGATAGGT 59.374 55.000 0.00 0.00 46.17 3.08
6376 6706 3.502164 CAAGTGGGCTTGGGATAGG 57.498 57.895 0.00 0.00 46.17 2.57
6387 6717 0.678048 GCTAGAAGTGGCCAAGTGGG 60.678 60.000 7.24 0.00 40.85 4.61
6388 6718 0.326264 AGCTAGAAGTGGCCAAGTGG 59.674 55.000 7.24 0.00 38.53 4.00
6389 6719 1.277557 AGAGCTAGAAGTGGCCAAGTG 59.722 52.381 7.24 0.00 0.00 3.16
6390 6720 1.552792 GAGAGCTAGAAGTGGCCAAGT 59.447 52.381 7.24 0.00 0.00 3.16
6391 6721 1.134551 GGAGAGCTAGAAGTGGCCAAG 60.135 57.143 7.24 0.76 0.00 3.61
6392 6722 0.905357 GGAGAGCTAGAAGTGGCCAA 59.095 55.000 7.24 0.00 0.00 4.52
6393 6723 1.323271 CGGAGAGCTAGAAGTGGCCA 61.323 60.000 0.00 0.00 0.00 5.36
6394 6724 1.324005 ACGGAGAGCTAGAAGTGGCC 61.324 60.000 0.00 0.00 0.00 5.36
6395 6725 0.533032 AACGGAGAGCTAGAAGTGGC 59.467 55.000 0.00 0.00 0.00 5.01
6396 6726 2.028930 ACAAACGGAGAGCTAGAAGTGG 60.029 50.000 0.00 0.00 0.00 4.00
6397 6727 3.305398 ACAAACGGAGAGCTAGAAGTG 57.695 47.619 0.00 0.00 0.00 3.16
6398 6728 5.662674 AATACAAACGGAGAGCTAGAAGT 57.337 39.130 0.00 0.00 0.00 3.01
6399 6729 8.381387 GTTTAAATACAAACGGAGAGCTAGAAG 58.619 37.037 0.00 0.00 0.00 2.85
6400 6730 8.092687 AGTTTAAATACAAACGGAGAGCTAGAA 58.907 33.333 0.00 0.00 42.12 2.10
6401 6731 7.609056 AGTTTAAATACAAACGGAGAGCTAGA 58.391 34.615 0.00 0.00 42.12 2.43
6402 6732 7.829378 AGTTTAAATACAAACGGAGAGCTAG 57.171 36.000 0.00 0.00 42.12 3.42
6403 6733 9.143631 GTTAGTTTAAATACAAACGGAGAGCTA 57.856 33.333 0.00 0.00 42.12 3.32
6404 6734 7.876582 AGTTAGTTTAAATACAAACGGAGAGCT 59.123 33.333 0.00 0.00 42.12 4.09
6405 6735 8.026341 AGTTAGTTTAAATACAAACGGAGAGC 57.974 34.615 0.00 0.00 42.12 4.09
6406 6736 9.420551 AGAGTTAGTTTAAATACAAACGGAGAG 57.579 33.333 0.00 0.00 42.12 3.20
6409 6739 9.143631 GCTAGAGTTAGTTTAAATACAAACGGA 57.856 33.333 0.00 0.00 42.12 4.69
6410 6740 8.385858 GGCTAGAGTTAGTTTAAATACAAACGG 58.614 37.037 0.00 0.00 42.12 4.44
6411 6741 8.385858 GGGCTAGAGTTAGTTTAAATACAAACG 58.614 37.037 0.00 0.00 42.12 3.60
6412 6742 8.385858 CGGGCTAGAGTTAGTTTAAATACAAAC 58.614 37.037 0.00 0.00 38.44 2.93
6413 6743 7.550196 CCGGGCTAGAGTTAGTTTAAATACAAA 59.450 37.037 0.00 0.00 0.00 2.83
6414 6744 7.043565 CCGGGCTAGAGTTAGTTTAAATACAA 58.956 38.462 0.00 0.00 0.00 2.41
6415 6745 6.380846 TCCGGGCTAGAGTTAGTTTAAATACA 59.619 38.462 0.00 0.00 0.00 2.29
6416 6746 6.809869 TCCGGGCTAGAGTTAGTTTAAATAC 58.190 40.000 0.00 0.00 0.00 1.89
6417 6747 7.439381 CATCCGGGCTAGAGTTAGTTTAAATA 58.561 38.462 0.00 0.00 0.00 1.40
6418 6748 5.945144 TCCGGGCTAGAGTTAGTTTAAAT 57.055 39.130 0.00 0.00 0.00 1.40
6419 6749 5.395990 CCATCCGGGCTAGAGTTAGTTTAAA 60.396 44.000 0.00 0.00 0.00 1.52
6420 6750 4.100498 CCATCCGGGCTAGAGTTAGTTTAA 59.900 45.833 0.00 0.00 0.00 1.52
6421 6751 3.640029 CCATCCGGGCTAGAGTTAGTTTA 59.360 47.826 0.00 0.00 0.00 2.01
6422 6752 2.434702 CCATCCGGGCTAGAGTTAGTTT 59.565 50.000 0.00 0.00 0.00 2.66
6423 6753 2.040178 CCATCCGGGCTAGAGTTAGTT 58.960 52.381 0.00 0.00 0.00 2.24
6424 6754 1.705873 CCATCCGGGCTAGAGTTAGT 58.294 55.000 0.00 0.00 0.00 2.24
6436 6766 4.008933 GGCGATCTCCCCATCCGG 62.009 72.222 0.00 0.00 0.00 5.14
6437 6767 4.008933 GGGCGATCTCCCCATCCG 62.009 72.222 9.89 0.00 42.36 4.18
6443 6773 0.107848 TTCGAAAAGGGCGATCTCCC 60.108 55.000 13.30 13.30 46.93 4.30
6444 6774 1.734163 TTTCGAAAAGGGCGATCTCC 58.266 50.000 8.44 0.00 37.64 3.71
6445 6775 3.824414 TTTTTCGAAAAGGGCGATCTC 57.176 42.857 21.53 0.00 37.64 2.75
6468 6798 3.073650 GTGGCTGATGGGGAGATTTATCT 59.926 47.826 0.00 0.00 40.50 1.98
6473 6803 1.002069 TTGTGGCTGATGGGGAGATT 58.998 50.000 0.00 0.00 0.00 2.40
6474 6804 0.257039 GTTGTGGCTGATGGGGAGAT 59.743 55.000 0.00 0.00 0.00 2.75
6475 6805 1.685224 GTTGTGGCTGATGGGGAGA 59.315 57.895 0.00 0.00 0.00 3.71
6476 6806 1.746615 CGTTGTGGCTGATGGGGAG 60.747 63.158 0.00 0.00 0.00 4.30
6477 6807 1.561769 ATCGTTGTGGCTGATGGGGA 61.562 55.000 0.00 0.00 0.00 4.81
6478 6808 1.077501 ATCGTTGTGGCTGATGGGG 60.078 57.895 0.00 0.00 0.00 4.96
6480 6810 1.097547 GGGATCGTTGTGGCTGATGG 61.098 60.000 0.00 0.00 0.00 3.51
6481 6811 1.097547 GGGGATCGTTGTGGCTGATG 61.098 60.000 0.00 0.00 0.00 3.07
6482 6812 1.224592 GGGGATCGTTGTGGCTGAT 59.775 57.895 0.00 0.00 0.00 2.90
6483 6813 1.918293 AGGGGATCGTTGTGGCTGA 60.918 57.895 0.00 0.00 0.00 4.26
6484 6814 1.746615 CAGGGGATCGTTGTGGCTG 60.747 63.158 0.00 0.00 0.00 4.85
6486 6816 2.040544 CACAGGGGATCGTTGTGGC 61.041 63.158 12.48 0.00 38.76 5.01
6488 6818 0.673644 GGTCACAGGGGATCGTTGTG 60.674 60.000 13.59 13.59 42.65 3.33
6490 6820 0.036164 TTGGTCACAGGGGATCGTTG 59.964 55.000 0.00 0.00 0.00 4.10
6491 6821 0.991920 ATTGGTCACAGGGGATCGTT 59.008 50.000 0.00 0.00 0.00 3.85
6492 6822 0.991920 AATTGGTCACAGGGGATCGT 59.008 50.000 0.00 0.00 0.00 3.73
6493 6823 1.668419 GAATTGGTCACAGGGGATCG 58.332 55.000 0.00 0.00 0.00 3.69
6494 6824 1.566231 AGGAATTGGTCACAGGGGATC 59.434 52.381 0.00 0.00 0.00 3.36
6495 6825 1.566231 GAGGAATTGGTCACAGGGGAT 59.434 52.381 0.00 0.00 0.00 3.85
6496 6826 0.991920 GAGGAATTGGTCACAGGGGA 59.008 55.000 0.00 0.00 0.00 4.81
6498 6828 0.034089 GGGAGGAATTGGTCACAGGG 60.034 60.000 0.00 0.00 0.00 4.45
6501 6831 0.613260 CTCGGGAGGAATTGGTCACA 59.387 55.000 0.00 0.00 0.00 3.58
6504 6834 1.137282 GAGACTCGGGAGGAATTGGTC 59.863 57.143 0.00 0.00 0.00 4.02
6505 6835 1.196012 GAGACTCGGGAGGAATTGGT 58.804 55.000 0.00 0.00 0.00 3.67
6506 6836 1.195115 TGAGACTCGGGAGGAATTGG 58.805 55.000 0.00 0.00 0.00 3.16
6507 6837 3.003480 GTTTGAGACTCGGGAGGAATTG 58.997 50.000 0.00 0.00 0.00 2.32
6508 6838 2.907042 AGTTTGAGACTCGGGAGGAATT 59.093 45.455 0.00 0.00 31.20 2.17
6509 6839 2.498078 GAGTTTGAGACTCGGGAGGAAT 59.502 50.000 0.00 0.00 44.90 3.01
6510 6840 1.893801 GAGTTTGAGACTCGGGAGGAA 59.106 52.381 0.00 0.00 44.90 3.36
6519 6849 1.700186 GGGACTTGGGAGTTTGAGACT 59.300 52.381 0.00 0.00 42.70 3.24
6521 6851 0.685097 CGGGACTTGGGAGTTTGAGA 59.315 55.000 0.00 0.00 35.88 3.27
6522 6852 0.685097 TCGGGACTTGGGAGTTTGAG 59.315 55.000 0.00 0.00 35.88 3.02
6523 6853 1.278127 GATCGGGACTTGGGAGTTTGA 59.722 52.381 0.00 0.00 35.88 2.69
6524 6854 1.679032 GGATCGGGACTTGGGAGTTTG 60.679 57.143 0.00 0.00 35.88 2.93
6525 6855 0.618981 GGATCGGGACTTGGGAGTTT 59.381 55.000 0.00 0.00 35.88 2.66
6526 6856 0.546747 TGGATCGGGACTTGGGAGTT 60.547 55.000 0.00 0.00 35.88 3.01
6527 6857 0.326618 ATGGATCGGGACTTGGGAGT 60.327 55.000 0.00 0.00 39.32 3.85
6528 6858 0.839946 AATGGATCGGGACTTGGGAG 59.160 55.000 0.00 0.00 0.00 4.30
6529 6859 1.211949 GAAATGGATCGGGACTTGGGA 59.788 52.381 0.00 0.00 0.00 4.37
6530 6860 1.064758 TGAAATGGATCGGGACTTGGG 60.065 52.381 0.00 0.00 0.00 4.12
6532 6862 4.202441 AGAATGAAATGGATCGGGACTTG 58.798 43.478 0.00 0.00 0.00 3.16
6533 6863 4.164988 AGAGAATGAAATGGATCGGGACTT 59.835 41.667 0.00 0.00 0.00 3.01
6534 6864 3.713764 AGAGAATGAAATGGATCGGGACT 59.286 43.478 0.00 0.00 0.00 3.85
6536 6866 4.444876 GGAAGAGAATGAAATGGATCGGGA 60.445 45.833 0.00 0.00 0.00 5.14
6539 6869 4.754114 GGAGGAAGAGAATGAAATGGATCG 59.246 45.833 0.00 0.00 0.00 3.69
6541 6871 4.410228 TCGGAGGAAGAGAATGAAATGGAT 59.590 41.667 0.00 0.00 0.00 3.41
6542 6872 3.774766 TCGGAGGAAGAGAATGAAATGGA 59.225 43.478 0.00 0.00 0.00 3.41
6543 6873 3.873952 GTCGGAGGAAGAGAATGAAATGG 59.126 47.826 0.00 0.00 0.00 3.16
6548 6878 1.486211 GGGTCGGAGGAAGAGAATGA 58.514 55.000 0.00 0.00 0.00 2.57
6549 6879 0.466124 GGGGTCGGAGGAAGAGAATG 59.534 60.000 0.00 0.00 0.00 2.67
6551 6881 1.305887 GGGGGTCGGAGGAAGAGAA 60.306 63.158 0.00 0.00 0.00 2.87
6566 6896 2.853077 AGAAGAATAGGTGGAAAGGGGG 59.147 50.000 0.00 0.00 0.00 5.40
6567 6897 4.527944 GAAGAAGAATAGGTGGAAAGGGG 58.472 47.826 0.00 0.00 0.00 4.79
6568 6898 4.527944 GGAAGAAGAATAGGTGGAAAGGG 58.472 47.826 0.00 0.00 0.00 3.95
6569 6899 4.192317 CGGAAGAAGAATAGGTGGAAAGG 58.808 47.826 0.00 0.00 0.00 3.11
6570 6900 3.623510 GCGGAAGAAGAATAGGTGGAAAG 59.376 47.826 0.00 0.00 0.00 2.62
6571 6901 3.606687 GCGGAAGAAGAATAGGTGGAAA 58.393 45.455 0.00 0.00 0.00 3.13
6572 6902 2.093128 GGCGGAAGAAGAATAGGTGGAA 60.093 50.000 0.00 0.00 0.00 3.53
6590 6920 2.288395 GGGCATATTCAATTTGGAGGCG 60.288 50.000 0.00 0.00 0.00 5.52
6602 6932 6.339730 TGTCATCAAATTTGTGGGCATATTC 58.660 36.000 17.47 0.17 0.00 1.75
6819 7319 4.168088 GGCCCCCTATTGCACCTATATAAT 59.832 45.833 0.00 0.00 0.00 1.28
7060 7560 2.989840 CTCCTTCACTGCAACTAACTCG 59.010 50.000 0.00 0.00 0.00 4.18
7143 7646 4.790878 CACAATGTTCCTGTGAATGACTG 58.209 43.478 0.00 0.00 45.80 3.51
7177 7680 4.261197 GGGACTTCAACTTGTAAGCAACAG 60.261 45.833 0.00 0.00 39.87 3.16
7709 8218 7.613585 AGACATTGCATAATCATCTCTCCTAG 58.386 38.462 0.00 0.00 0.00 3.02
7875 8384 7.860373 GCAAATAAATGCATAATACTTCCGTCA 59.140 33.333 0.00 0.00 45.70 4.35
8012 8521 2.687370 GGGCAAACAATTCCACATGTC 58.313 47.619 0.00 0.00 0.00 3.06
8063 8572 9.360093 TGTTAAACAACCACAAATTACAAGAAG 57.640 29.630 0.00 0.00 0.00 2.85
8218 8734 6.428083 TCCTCAACATTCTGGTACACTTAA 57.572 37.500 0.00 0.00 0.00 1.85
8260 8776 7.180322 TCGTACCACTTTTACATATGGGTTA 57.820 36.000 7.80 0.00 36.47 2.85
8271 8787 6.794374 TCGTGCTATTATCGTACCACTTTTA 58.206 36.000 0.00 0.00 0.00 1.52
8328 8844 6.493802 AGGTATTAAGCTCGAGGATGTTGATA 59.506 38.462 15.58 0.00 0.00 2.15
8404 8920 5.753438 TGATCAAGATTATGTTGCGTAGGAC 59.247 40.000 0.00 0.00 0.00 3.85
8449 8965 9.506018 TTGTCATGAATCACTTTTATCTTGAGA 57.494 29.630 0.00 0.00 29.85 3.27
8495 9011 4.508861 GCATGCCCATGTATCATTGTTTTC 59.491 41.667 6.36 0.00 40.80 2.29
8512 9028 4.654015 CAATGCTTGTTTATTTGCATGCC 58.346 39.130 16.68 0.00 44.15 4.40
8667 9183 4.455533 TGCTCGATGCTACATTTTGAGTTT 59.544 37.500 8.07 0.00 43.37 2.66
8685 9201 5.557893 GCTCTTTATGCTTTGTATCTGCTCG 60.558 44.000 0.00 0.00 0.00 5.03
8779 9295 3.737663 GCTTCACTGTTGCCAATTTGTCA 60.738 43.478 0.00 0.00 0.00 3.58
8829 9346 0.679002 TAGGTCCACCTTCTCCGTCG 60.679 60.000 2.90 0.00 46.09 5.12
8847 9364 4.777896 GGGTGGCAGTATAATCTCTGGATA 59.222 45.833 0.00 0.00 32.94 2.59
8850 9367 2.705658 TGGGTGGCAGTATAATCTCTGG 59.294 50.000 0.00 0.00 32.94 3.86
8909 9426 1.879380 TGTTCAAGGCAGTGTGTATGC 59.121 47.619 0.00 0.00 43.09 3.14
8919 9436 3.069872 AGCATCAATTGTTGTTCAAGGCA 59.930 39.130 15.99 0.00 39.55 4.75
8930 9447 1.086696 CCGAACGGAGCATCAATTGT 58.913 50.000 7.53 0.00 36.25 2.71
8940 9457 0.179161 CTACTCTGCACCGAACGGAG 60.179 60.000 20.14 13.02 44.59 4.63
8942 9459 0.456312 GTCTACTCTGCACCGAACGG 60.456 60.000 11.83 11.83 42.03 4.44
8974 9491 6.587226 CAGGTTATTTACTGTTGTACGCACTA 59.413 38.462 0.00 0.00 0.00 2.74
8980 9497 5.851047 ACGCAGGTTATTTACTGTTGTAC 57.149 39.130 0.00 0.00 37.07 2.90
8987 9504 4.970662 TCTCGTACGCAGGTTATTTACT 57.029 40.909 11.24 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.