Multiple sequence alignment - TraesCS5B01G061300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G061300 chr5B 100.000 2641 0 0 1 2641 68419765 68422405 0.000000e+00 4878.0
1 TraesCS5B01G061300 chr5B 95.437 767 29 6 1 761 614992034 614991268 0.000000e+00 1218.0
2 TraesCS5B01G061300 chr5B 95.544 763 29 4 1 761 575851374 575852133 0.000000e+00 1216.0
3 TraesCS5B01G061300 chr5B 95.431 766 27 5 1 761 456330514 456331276 0.000000e+00 1214.0
4 TraesCS5B01G061300 chr5B 91.068 515 33 3 1147 1648 68371247 68371761 0.000000e+00 684.0
5 TraesCS5B01G061300 chr5B 90.909 451 23 5 1923 2358 68371749 68372196 8.140000e-165 590.0
6 TraesCS5B01G061300 chr5B 93.023 301 19 2 2342 2641 68372246 68372545 3.120000e-119 438.0
7 TraesCS5B01G061300 chr7B 96.078 765 25 5 1 761 586573079 586573842 0.000000e+00 1242.0
8 TraesCS5B01G061300 chr3B 95.801 762 25 5 1 761 741700749 741701504 0.000000e+00 1223.0
9 TraesCS5B01G061300 chr3B 95.550 764 28 6 1 761 82601420 82602180 0.000000e+00 1218.0
10 TraesCS5B01G061300 chr4B 95.561 766 27 4 1 761 1075040 1075803 0.000000e+00 1219.0
11 TraesCS5B01G061300 chr4B 84.337 332 39 8 828 1147 80591508 80591178 1.970000e-81 313.0
12 TraesCS5B01G061300 chr6B 95.544 763 31 3 1 761 460379252 460378491 0.000000e+00 1218.0
13 TraesCS5B01G061300 chr6B 95.213 773 29 6 1 769 41935828 41935060 0.000000e+00 1216.0
14 TraesCS5B01G061300 chr5A 92.160 727 38 6 1932 2641 52006021 52005297 0.000000e+00 1009.0
15 TraesCS5B01G061300 chr5A 89.484 523 29 9 1148 1648 52006536 52006018 2.870000e-179 638.0
16 TraesCS5B01G061300 chr5A 88.095 378 26 5 1150 1514 51809916 51809545 5.220000e-117 431.0
17 TraesCS5B01G061300 chr5A 83.871 372 54 4 1147 1516 51792446 51792079 1.500000e-92 350.0
18 TraesCS5B01G061300 chr5A 82.620 374 53 9 1147 1517 51748375 51748011 1.180000e-83 320.0
19 TraesCS5B01G061300 chr5D 91.884 727 38 8 1932 2641 62131196 62130474 0.000000e+00 996.0
20 TraesCS5B01G061300 chr5D 92.248 516 25 7 1147 1648 62131707 62131193 0.000000e+00 717.0
21 TraesCS5B01G061300 chr5D 90.426 376 21 6 2167 2528 93604928 93604554 5.110000e-132 481.0
22 TraesCS5B01G061300 chr5D 88.267 375 35 6 1147 1521 61838279 61837914 8.680000e-120 440.0
23 TraesCS5B01G061300 chr5D 88.400 250 26 3 2393 2641 61836919 61836672 5.530000e-77 298.0
24 TraesCS5B01G061300 chr3A 92.211 398 20 6 761 1148 24539685 24539289 1.070000e-153 553.0
25 TraesCS5B01G061300 chr3A 81.818 220 20 9 763 975 8579268 8579062 1.630000e-37 167.0
26 TraesCS5B01G061300 chr7A 94.737 285 12 3 1648 1930 667348757 667348474 8.680000e-120 440.0
27 TraesCS5B01G061300 chr7A 93.684 285 15 3 1648 1930 5638339 5638056 8.740000e-115 424.0
28 TraesCS5B01G061300 chr2A 93.537 294 14 5 1648 1937 183770416 183770708 1.450000e-117 433.0
29 TraesCS5B01G061300 chr2A 93.333 285 15 4 1648 1930 569923577 569923859 4.070000e-113 418.0
30 TraesCS5B01G061300 chr2A 85.443 158 10 4 763 912 750717653 750717501 4.550000e-33 152.0
31 TraesCS5B01G061300 chr1A 94.035 285 14 3 1648 1930 259176148 259176431 1.880000e-116 429.0
32 TraesCS5B01G061300 chr1A 93.684 285 15 3 1648 1930 398055462 398055745 8.740000e-115 424.0
33 TraesCS5B01G061300 chr1A 92.958 284 18 2 1648 1930 545902505 545902787 1.890000e-111 412.0
34 TraesCS5B01G061300 chr1A 91.111 45 2 2 1517 1560 451722390 451722433 2.840000e-05 60.2
35 TraesCS5B01G061300 chr6A 93.684 285 15 3 1648 1930 23879705 23879422 8.740000e-115 424.0
36 TraesCS5B01G061300 chr6A 93.333 285 16 3 1648 1930 250073992 250073709 4.070000e-113 418.0
37 TraesCS5B01G061300 chr6A 87.037 54 6 1 1095 1147 206289548 206289601 2.840000e-05 60.2
38 TraesCS5B01G061300 chr7D 87.647 340 34 5 817 1148 83747232 83746893 3.190000e-104 388.0
39 TraesCS5B01G061300 chr7D 86.416 346 36 8 817 1152 39588013 39588357 4.150000e-98 368.0
40 TraesCS5B01G061300 chr3D 87.574 338 34 4 819 1148 568497845 568498182 4.120000e-103 385.0
41 TraesCS5B01G061300 chr3D 80.184 217 38 5 2197 2410 425073879 425074093 9.790000e-35 158.0
42 TraesCS5B01G061300 chr3D 88.889 72 2 1 758 823 568497756 568497827 1.680000e-12 84.2
43 TraesCS5B01G061300 chr2D 86.982 338 37 5 817 1147 626174545 626174882 8.930000e-100 374.0
44 TraesCS5B01G061300 chrUn 82.540 378 56 8 1147 1521 65979822 65979452 9.120000e-85 324.0
45 TraesCS5B01G061300 chrUn 81.510 384 53 13 1148 1522 337950376 337950750 1.540000e-77 300.0
46 TraesCS5B01G061300 chr2B 74.242 594 86 38 2054 2621 404204166 404204718 1.250000e-43 187.0
47 TraesCS5B01G061300 chr2B 87.500 56 6 1 1093 1147 691401864 691401919 2.190000e-06 63.9
48 TraesCS5B01G061300 chr1B 87.179 156 9 3 763 910 632887619 632887467 1.630000e-37 167.0
49 TraesCS5B01G061300 chr1B 89.091 55 5 1 1095 1148 325985813 325985759 1.700000e-07 67.6
50 TraesCS5B01G061300 chr6D 79.894 189 33 4 2211 2396 297465661 297465847 1.650000e-27 134.0
51 TraesCS5B01G061300 chr4A 80.882 136 23 3 2283 2417 32471144 32471011 1.290000e-18 104.0
52 TraesCS5B01G061300 chr1D 76.159 151 32 4 2264 2413 453267452 453267305 2.820000e-10 76.8
53 TraesCS5B01G061300 chr1D 91.071 56 4 1 1093 1147 136523172 136523117 1.010000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G061300 chr5B 68419765 68422405 2640 False 4878.000000 4878 100.000000 1 2641 1 chr5B.!!$F1 2640
1 TraesCS5B01G061300 chr5B 614991268 614992034 766 True 1218.000000 1218 95.437000 1 761 1 chr5B.!!$R1 760
2 TraesCS5B01G061300 chr5B 575851374 575852133 759 False 1216.000000 1216 95.544000 1 761 1 chr5B.!!$F3 760
3 TraesCS5B01G061300 chr5B 456330514 456331276 762 False 1214.000000 1214 95.431000 1 761 1 chr5B.!!$F2 760
4 TraesCS5B01G061300 chr5B 68371247 68372545 1298 False 570.666667 684 91.666667 1147 2641 3 chr5B.!!$F4 1494
5 TraesCS5B01G061300 chr7B 586573079 586573842 763 False 1242.000000 1242 96.078000 1 761 1 chr7B.!!$F1 760
6 TraesCS5B01G061300 chr3B 741700749 741701504 755 False 1223.000000 1223 95.801000 1 761 1 chr3B.!!$F2 760
7 TraesCS5B01G061300 chr3B 82601420 82602180 760 False 1218.000000 1218 95.550000 1 761 1 chr3B.!!$F1 760
8 TraesCS5B01G061300 chr4B 1075040 1075803 763 False 1219.000000 1219 95.561000 1 761 1 chr4B.!!$F1 760
9 TraesCS5B01G061300 chr6B 460378491 460379252 761 True 1218.000000 1218 95.544000 1 761 1 chr6B.!!$R2 760
10 TraesCS5B01G061300 chr6B 41935060 41935828 768 True 1216.000000 1216 95.213000 1 769 1 chr6B.!!$R1 768
11 TraesCS5B01G061300 chr5A 52005297 52006536 1239 True 823.500000 1009 90.822000 1148 2641 2 chr5A.!!$R4 1493
12 TraesCS5B01G061300 chr5D 62130474 62131707 1233 True 856.500000 996 92.066000 1147 2641 2 chr5D.!!$R3 1494
13 TraesCS5B01G061300 chr5D 61836672 61838279 1607 True 369.000000 440 88.333500 1147 2641 2 chr5D.!!$R2 1494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
866 882 0.177141 TATTCTACCTGCGTGCCACC 59.823 55.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2528 3090 0.030504 TTACGGTTGTTGCGACGAGA 59.969 50.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.216117 TCTTCTAATCCGTTTCTCCTTTTTAAG 57.784 33.333 0.00 0.00 0.00 1.85
116 117 5.764487 TGTGAAACTATGCACACAATTCA 57.236 34.783 3.32 2.11 39.86 2.57
323 325 9.930693 TGGTGAACATTTTAGTTTTACTGTTTT 57.069 25.926 0.00 0.00 0.00 2.43
379 382 9.743581 ATTTGAATTGGGCTTTGATTTTTATCT 57.256 25.926 0.00 0.00 0.00 1.98
387 390 6.350949 GGGCTTTGATTTTTATCTAGTGGCAA 60.351 38.462 0.00 0.00 0.00 4.52
445 448 2.458620 GGGAGGTCACTGTAGCTAACT 58.541 52.381 0.00 0.00 0.00 2.24
460 463 5.056894 AGCTAACTACTTGAGGTGTTACG 57.943 43.478 0.00 0.00 0.00 3.18
561 564 5.412594 CACCACAAGTCTACACATTATTGCT 59.587 40.000 0.00 0.00 0.00 3.91
762 778 0.242825 CACGGGCGTTCTTCTAGTGA 59.757 55.000 0.00 0.00 0.00 3.41
769 785 3.984633 GGCGTTCTTCTAGTGATGATAGC 59.015 47.826 0.00 0.00 33.16 2.97
770 786 3.984633 GCGTTCTTCTAGTGATGATAGCC 59.015 47.826 0.00 0.00 0.00 3.93
771 787 4.499865 GCGTTCTTCTAGTGATGATAGCCA 60.500 45.833 0.00 0.00 0.00 4.75
772 788 5.592054 CGTTCTTCTAGTGATGATAGCCAA 58.408 41.667 0.00 0.00 0.00 4.52
773 789 5.689514 CGTTCTTCTAGTGATGATAGCCAAG 59.310 44.000 0.00 0.00 0.00 3.61
774 790 5.207110 TCTTCTAGTGATGATAGCCAAGC 57.793 43.478 0.00 0.00 0.00 4.01
775 791 4.898265 TCTTCTAGTGATGATAGCCAAGCT 59.102 41.667 0.00 0.00 43.41 3.74
776 792 4.597404 TCTAGTGATGATAGCCAAGCTG 57.403 45.455 0.00 0.00 40.10 4.24
777 793 4.218312 TCTAGTGATGATAGCCAAGCTGA 58.782 43.478 0.00 0.00 40.10 4.26
778 794 3.920231 AGTGATGATAGCCAAGCTGAA 57.080 42.857 0.00 0.00 40.10 3.02
779 795 4.226427 AGTGATGATAGCCAAGCTGAAA 57.774 40.909 0.00 0.00 40.10 2.69
780 796 4.789807 AGTGATGATAGCCAAGCTGAAAT 58.210 39.130 0.00 0.00 40.10 2.17
781 797 5.198965 AGTGATGATAGCCAAGCTGAAATT 58.801 37.500 0.00 0.00 40.10 1.82
782 798 6.359804 AGTGATGATAGCCAAGCTGAAATTA 58.640 36.000 0.00 0.00 40.10 1.40
783 799 6.830324 AGTGATGATAGCCAAGCTGAAATTAA 59.170 34.615 0.00 0.00 40.10 1.40
784 800 7.504911 AGTGATGATAGCCAAGCTGAAATTAAT 59.495 33.333 0.00 0.00 40.10 1.40
785 801 8.139989 GTGATGATAGCCAAGCTGAAATTAATT 58.860 33.333 0.00 0.00 40.10 1.40
786 802 8.139350 TGATGATAGCCAAGCTGAAATTAATTG 58.861 33.333 0.39 0.00 40.10 2.32
787 803 6.808829 TGATAGCCAAGCTGAAATTAATTGG 58.191 36.000 0.39 0.00 40.10 3.16
788 804 6.606796 TGATAGCCAAGCTGAAATTAATTGGA 59.393 34.615 0.39 0.00 42.46 3.53
789 805 5.334724 AGCCAAGCTGAAATTAATTGGAG 57.665 39.130 0.39 2.22 42.46 3.86
790 806 4.161001 AGCCAAGCTGAAATTAATTGGAGG 59.839 41.667 0.39 0.00 42.46 4.30
791 807 4.160252 GCCAAGCTGAAATTAATTGGAGGA 59.840 41.667 0.39 0.00 42.46 3.71
792 808 5.163374 GCCAAGCTGAAATTAATTGGAGGAT 60.163 40.000 0.39 0.00 42.46 3.24
793 809 6.631088 GCCAAGCTGAAATTAATTGGAGGATT 60.631 38.462 0.39 0.00 42.46 3.01
794 810 6.982724 CCAAGCTGAAATTAATTGGAGGATTC 59.017 38.462 0.39 0.00 42.46 2.52
795 811 7.364056 CCAAGCTGAAATTAATTGGAGGATTCA 60.364 37.037 0.39 0.00 42.46 2.57
796 812 7.722949 AGCTGAAATTAATTGGAGGATTCAA 57.277 32.000 0.39 0.00 38.46 2.69
811 827 9.524496 TGGAGGATTCAATTCAATATGATAAGG 57.476 33.333 0.00 0.00 0.00 2.69
812 828 9.525826 GGAGGATTCAATTCAATATGATAAGGT 57.474 33.333 0.00 0.00 0.00 3.50
814 830 9.305555 AGGATTCAATTCAATATGATAAGGTGG 57.694 33.333 0.00 0.00 0.00 4.61
815 831 8.031277 GGATTCAATTCAATATGATAAGGTGGC 58.969 37.037 0.00 0.00 0.00 5.01
816 832 7.894753 TTCAATTCAATATGATAAGGTGGCA 57.105 32.000 0.00 0.00 0.00 4.92
817 833 7.894753 TCAATTCAATATGATAAGGTGGCAA 57.105 32.000 0.00 0.00 0.00 4.52
818 834 8.303780 TCAATTCAATATGATAAGGTGGCAAA 57.696 30.769 0.00 0.00 0.00 3.68
819 835 8.756927 TCAATTCAATATGATAAGGTGGCAAAA 58.243 29.630 0.00 0.00 0.00 2.44
820 836 9.550406 CAATTCAATATGATAAGGTGGCAAAAT 57.450 29.630 0.00 0.00 0.00 1.82
835 851 9.651913 AGGTGGCAAAATTAATTATTAGTGTTG 57.348 29.630 0.01 6.15 0.00 3.33
836 852 8.387354 GGTGGCAAAATTAATTATTAGTGTTGC 58.613 33.333 20.28 20.28 38.43 4.17
837 853 8.930760 GTGGCAAAATTAATTATTAGTGTTGCA 58.069 29.630 25.82 15.18 40.37 4.08
838 854 9.494271 TGGCAAAATTAATTATTAGTGTTGCAA 57.506 25.926 25.82 17.90 40.37 4.08
855 871 8.947115 AGTGTTGCAAATTCTAGTTATTCTACC 58.053 33.333 0.00 0.00 0.00 3.18
856 872 8.947115 GTGTTGCAAATTCTAGTTATTCTACCT 58.053 33.333 0.00 0.00 0.00 3.08
857 873 8.946085 TGTTGCAAATTCTAGTTATTCTACCTG 58.054 33.333 0.00 0.00 0.00 4.00
858 874 7.553881 TGCAAATTCTAGTTATTCTACCTGC 57.446 36.000 0.00 0.00 0.00 4.85
859 875 6.257849 TGCAAATTCTAGTTATTCTACCTGCG 59.742 38.462 0.00 0.00 0.00 5.18
860 876 6.258068 GCAAATTCTAGTTATTCTACCTGCGT 59.742 38.462 0.00 0.00 0.00 5.24
861 877 7.621991 CAAATTCTAGTTATTCTACCTGCGTG 58.378 38.462 0.00 0.00 0.00 5.34
862 878 4.303086 TCTAGTTATTCTACCTGCGTGC 57.697 45.455 0.00 0.00 0.00 5.34
863 879 2.311124 AGTTATTCTACCTGCGTGCC 57.689 50.000 0.00 0.00 0.00 5.01
864 880 1.553248 AGTTATTCTACCTGCGTGCCA 59.447 47.619 0.00 0.00 0.00 4.92
865 881 1.664151 GTTATTCTACCTGCGTGCCAC 59.336 52.381 0.00 0.00 0.00 5.01
866 882 0.177141 TATTCTACCTGCGTGCCACC 59.823 55.000 0.00 0.00 0.00 4.61
867 883 1.836999 ATTCTACCTGCGTGCCACCA 61.837 55.000 0.00 0.00 0.00 4.17
868 884 2.434884 CTACCTGCGTGCCACCAG 60.435 66.667 6.40 6.40 0.00 4.00
872 888 4.320456 CTGCGTGCCACCAGGAGT 62.320 66.667 0.00 0.00 36.89 3.85
873 889 2.920384 TGCGTGCCACCAGGAGTA 60.920 61.111 0.00 0.00 36.89 2.59
874 890 2.125512 GCGTGCCACCAGGAGTAG 60.126 66.667 0.00 0.00 36.89 2.57
875 891 2.943978 GCGTGCCACCAGGAGTAGT 61.944 63.158 0.00 0.00 36.89 2.73
876 892 1.671742 CGTGCCACCAGGAGTAGTT 59.328 57.895 0.00 0.00 36.89 2.24
877 893 0.389948 CGTGCCACCAGGAGTAGTTC 60.390 60.000 0.00 0.00 36.89 3.01
878 894 0.685097 GTGCCACCAGGAGTAGTTCA 59.315 55.000 0.00 0.00 36.89 3.18
879 895 1.071699 GTGCCACCAGGAGTAGTTCAA 59.928 52.381 0.00 0.00 36.89 2.69
880 896 1.771854 TGCCACCAGGAGTAGTTCAAA 59.228 47.619 0.00 0.00 36.89 2.69
881 897 2.375174 TGCCACCAGGAGTAGTTCAAAT 59.625 45.455 0.00 0.00 36.89 2.32
882 898 3.181434 TGCCACCAGGAGTAGTTCAAATT 60.181 43.478 0.00 0.00 36.89 1.82
883 899 4.042311 TGCCACCAGGAGTAGTTCAAATTA 59.958 41.667 0.00 0.00 36.89 1.40
884 900 4.395231 GCCACCAGGAGTAGTTCAAATTAC 59.605 45.833 0.00 0.00 36.89 1.89
885 901 5.803470 GCCACCAGGAGTAGTTCAAATTACT 60.803 44.000 0.00 0.00 36.89 2.24
886 902 6.238648 CCACCAGGAGTAGTTCAAATTACTT 58.761 40.000 0.00 0.00 36.89 2.24
887 903 6.715264 CCACCAGGAGTAGTTCAAATTACTTT 59.285 38.462 0.00 0.00 36.89 2.66
888 904 7.094762 CCACCAGGAGTAGTTCAAATTACTTTC 60.095 40.741 0.00 0.00 36.89 2.62
889 905 7.661847 CACCAGGAGTAGTTCAAATTACTTTCT 59.338 37.037 0.00 0.15 32.44 2.52
890 906 7.661847 ACCAGGAGTAGTTCAAATTACTTTCTG 59.338 37.037 15.00 15.00 35.37 3.02
891 907 7.661847 CCAGGAGTAGTTCAAATTACTTTCTGT 59.338 37.037 17.60 0.00 34.72 3.41
892 908 9.057089 CAGGAGTAGTTCAAATTACTTTCTGTT 57.943 33.333 14.36 0.00 32.44 3.16
893 909 9.628500 AGGAGTAGTTCAAATTACTTTCTGTTT 57.372 29.630 0.27 0.00 32.44 2.83
894 910 9.665264 GGAGTAGTTCAAATTACTTTCTGTTTG 57.335 33.333 0.27 0.00 32.44 2.93
895 911 9.170584 GAGTAGTTCAAATTACTTTCTGTTTGC 57.829 33.333 0.27 0.00 32.44 3.68
896 912 8.135529 AGTAGTTCAAATTACTTTCTGTTTGCC 58.864 33.333 0.00 0.00 32.95 4.52
897 913 6.872920 AGTTCAAATTACTTTCTGTTTGCCA 58.127 32.000 0.00 0.00 32.95 4.92
898 914 7.327214 AGTTCAAATTACTTTCTGTTTGCCAA 58.673 30.769 0.00 0.00 32.95 4.52
899 915 7.821846 AGTTCAAATTACTTTCTGTTTGCCAAA 59.178 29.630 0.00 0.00 32.95 3.28
900 916 7.532682 TCAAATTACTTTCTGTTTGCCAAAC 57.467 32.000 13.35 13.35 41.73 2.93
901 917 7.327214 TCAAATTACTTTCTGTTTGCCAAACT 58.673 30.769 20.11 2.63 41.90 2.66
902 918 8.470805 TCAAATTACTTTCTGTTTGCCAAACTA 58.529 29.630 20.11 6.82 41.90 2.24
903 919 9.260002 CAAATTACTTTCTGTTTGCCAAACTAT 57.740 29.630 20.11 3.54 41.90 2.12
904 920 8.816640 AATTACTTTCTGTTTGCCAAACTATG 57.183 30.769 20.11 10.92 41.90 2.23
921 937 8.975410 CAAACTATGGAATATACAATGCATGG 57.025 34.615 0.00 0.00 33.21 3.66
922 938 8.795513 CAAACTATGGAATATACAATGCATGGA 58.204 33.333 8.45 0.00 31.80 3.41
923 939 8.938801 AACTATGGAATATACAATGCATGGAA 57.061 30.769 8.45 0.00 31.80 3.53
924 940 8.340618 ACTATGGAATATACAATGCATGGAAC 57.659 34.615 8.45 0.00 31.80 3.62
925 941 8.166061 ACTATGGAATATACAATGCATGGAACT 58.834 33.333 8.45 0.00 31.80 3.01
926 942 7.844493 ATGGAATATACAATGCATGGAACTT 57.156 32.000 8.45 0.00 0.00 2.66
927 943 7.275888 TGGAATATACAATGCATGGAACTTC 57.724 36.000 8.45 5.19 0.00 3.01
928 944 6.265196 TGGAATATACAATGCATGGAACTTCC 59.735 38.462 8.45 13.61 37.17 3.46
929 945 6.294731 GGAATATACAATGCATGGAACTTCCC 60.295 42.308 8.45 0.00 35.03 3.97
930 946 2.307496 ACAATGCATGGAACTTCCCA 57.693 45.000 8.45 0.00 41.05 4.37
931 947 2.173519 ACAATGCATGGAACTTCCCAG 58.826 47.619 8.45 0.00 39.97 4.45
932 948 2.173519 CAATGCATGGAACTTCCCAGT 58.826 47.619 0.00 0.00 39.97 4.00
933 949 2.134789 ATGCATGGAACTTCCCAGTC 57.865 50.000 0.00 0.00 39.97 3.51
934 950 0.770499 TGCATGGAACTTCCCAGTCA 59.230 50.000 5.30 0.00 39.97 3.41
935 951 1.144708 TGCATGGAACTTCCCAGTCAA 59.855 47.619 5.30 0.00 39.97 3.18
936 952 2.238521 GCATGGAACTTCCCAGTCAAA 58.761 47.619 5.30 0.00 39.97 2.69
937 953 2.627699 GCATGGAACTTCCCAGTCAAAA 59.372 45.455 5.30 0.00 39.97 2.44
938 954 3.259123 GCATGGAACTTCCCAGTCAAAAT 59.741 43.478 5.30 0.00 39.97 1.82
939 955 4.619160 GCATGGAACTTCCCAGTCAAAATC 60.619 45.833 5.30 0.00 39.97 2.17
940 956 4.177537 TGGAACTTCCCAGTCAAAATCA 57.822 40.909 5.30 0.00 35.03 2.57
941 957 4.739793 TGGAACTTCCCAGTCAAAATCAT 58.260 39.130 5.30 0.00 35.03 2.45
942 958 5.886609 TGGAACTTCCCAGTCAAAATCATA 58.113 37.500 5.30 0.00 35.03 2.15
943 959 5.945784 TGGAACTTCCCAGTCAAAATCATAG 59.054 40.000 5.30 0.00 35.03 2.23
944 960 6.180472 GGAACTTCCCAGTCAAAATCATAGA 58.820 40.000 0.00 0.00 30.45 1.98
945 961 6.659242 GGAACTTCCCAGTCAAAATCATAGAA 59.341 38.462 0.00 0.00 30.45 2.10
946 962 7.176690 GGAACTTCCCAGTCAAAATCATAGAAA 59.823 37.037 0.00 0.00 30.45 2.52
947 963 8.477419 AACTTCCCAGTCAAAATCATAGAAAA 57.523 30.769 0.00 0.00 30.45 2.29
948 964 8.477419 ACTTCCCAGTCAAAATCATAGAAAAA 57.523 30.769 0.00 0.00 0.00 1.94
949 965 8.579863 ACTTCCCAGTCAAAATCATAGAAAAAG 58.420 33.333 0.00 0.00 0.00 2.27
950 966 8.477419 TTCCCAGTCAAAATCATAGAAAAAGT 57.523 30.769 0.00 0.00 0.00 2.66
951 967 7.885297 TCCCAGTCAAAATCATAGAAAAAGTG 58.115 34.615 0.00 0.00 0.00 3.16
952 968 7.723616 TCCCAGTCAAAATCATAGAAAAAGTGA 59.276 33.333 0.00 0.00 0.00 3.41
953 969 8.025445 CCCAGTCAAAATCATAGAAAAAGTGAG 58.975 37.037 0.00 0.00 0.00 3.51
954 970 8.786898 CCAGTCAAAATCATAGAAAAAGTGAGA 58.213 33.333 0.00 0.00 0.00 3.27
998 1014 7.845066 AATTAGATTTTGGAACTAGGTCGAC 57.155 36.000 7.13 7.13 0.00 4.20
999 1015 4.203654 AGATTTTGGAACTAGGTCGACC 57.796 45.455 27.67 27.67 0.00 4.79
1000 1016 3.581332 AGATTTTGGAACTAGGTCGACCA 59.419 43.478 35.00 19.95 38.89 4.02
1001 1017 3.396260 TTTTGGAACTAGGTCGACCAG 57.604 47.619 35.00 28.58 38.89 4.00
1002 1018 0.606604 TTGGAACTAGGTCGACCAGC 59.393 55.000 35.00 18.30 38.89 4.85
1003 1019 0.251653 TGGAACTAGGTCGACCAGCT 60.252 55.000 35.00 20.77 38.89 4.24
1004 1020 0.173708 GGAACTAGGTCGACCAGCTG 59.826 60.000 35.00 22.34 38.89 4.24
1005 1021 0.173708 GAACTAGGTCGACCAGCTGG 59.826 60.000 35.00 31.60 38.89 4.85
1015 1031 3.369921 CCAGCTGGTTTTGCCCTC 58.630 61.111 25.53 0.00 36.04 4.30
1016 1032 2.629656 CCAGCTGGTTTTGCCCTCG 61.630 63.158 25.53 0.00 36.04 4.63
1017 1033 1.600636 CAGCTGGTTTTGCCCTCGA 60.601 57.895 5.57 0.00 36.04 4.04
1018 1034 0.962356 CAGCTGGTTTTGCCCTCGAT 60.962 55.000 5.57 0.00 36.04 3.59
1019 1035 0.962356 AGCTGGTTTTGCCCTCGATG 60.962 55.000 0.00 0.00 36.04 3.84
1020 1036 0.960364 GCTGGTTTTGCCCTCGATGA 60.960 55.000 0.00 0.00 36.04 2.92
1021 1037 1.755179 CTGGTTTTGCCCTCGATGAT 58.245 50.000 0.00 0.00 36.04 2.45
1022 1038 2.917933 CTGGTTTTGCCCTCGATGATA 58.082 47.619 0.00 0.00 36.04 2.15
1023 1039 3.278574 CTGGTTTTGCCCTCGATGATAA 58.721 45.455 0.00 0.00 36.04 1.75
1024 1040 3.691575 TGGTTTTGCCCTCGATGATAAA 58.308 40.909 0.00 0.00 36.04 1.40
1025 1041 4.082845 TGGTTTTGCCCTCGATGATAAAA 58.917 39.130 0.00 0.00 36.04 1.52
1026 1042 4.524714 TGGTTTTGCCCTCGATGATAAAAA 59.475 37.500 0.00 0.00 36.04 1.94
1101 1117 7.712204 AATTTTGTATATATAAAGGGCCCCG 57.288 36.000 21.43 0.00 0.00 5.73
1102 1118 6.451292 TTTTGTATATATAAAGGGCCCCGA 57.549 37.500 21.43 3.71 0.00 5.14
1103 1119 6.645884 TTTGTATATATAAAGGGCCCCGAT 57.354 37.500 21.43 12.27 0.00 4.18
1104 1120 6.645884 TTGTATATATAAAGGGCCCCGATT 57.354 37.500 21.43 14.42 0.00 3.34
1105 1121 7.752518 TTGTATATATAAAGGGCCCCGATTA 57.247 36.000 21.43 16.29 0.00 1.75
1106 1122 7.941053 TGTATATATAAAGGGCCCCGATTAT 57.059 36.000 21.43 21.82 0.00 1.28
1107 1123 9.449896 TTGTATATATAAAGGGCCCCGATTATA 57.550 33.333 21.43 23.16 32.04 0.98
1108 1124 8.873144 TGTATATATAAAGGGCCCCGATTATAC 58.127 37.037 24.14 22.01 31.10 1.47
1109 1125 9.097946 GTATATATAAAGGGCCCCGATTATACT 57.902 37.037 24.14 18.89 31.10 2.12
1110 1126 6.903340 ATATAAAGGGCCCCGATTATACTT 57.097 37.500 24.14 13.40 31.10 2.24
1111 1127 3.503800 AAAGGGCCCCGATTATACTTC 57.496 47.619 21.43 0.00 0.00 3.01
1112 1128 1.359168 AGGGCCCCGATTATACTTCC 58.641 55.000 21.43 0.00 0.00 3.46
1113 1129 0.036671 GGGCCCCGATTATACTTCCG 60.037 60.000 12.23 0.00 0.00 4.30
1114 1130 0.683412 GGCCCCGATTATACTTCCGT 59.317 55.000 0.00 0.00 0.00 4.69
1115 1131 1.337541 GGCCCCGATTATACTTCCGTC 60.338 57.143 0.00 0.00 0.00 4.79
1116 1132 1.337541 GCCCCGATTATACTTCCGTCC 60.338 57.143 0.00 0.00 0.00 4.79
1117 1133 1.274447 CCCCGATTATACTTCCGTCCC 59.726 57.143 0.00 0.00 0.00 4.46
1118 1134 1.068055 CCCGATTATACTTCCGTCCCG 60.068 57.143 0.00 0.00 0.00 5.14
1130 1146 3.739613 GTCCCGGGCCCCTGAAAT 61.740 66.667 18.49 0.00 0.00 2.17
1131 1147 2.944390 TCCCGGGCCCCTGAAATT 60.944 61.111 18.49 0.00 0.00 1.82
1132 1148 2.038813 CCCGGGCCCCTGAAATTT 59.961 61.111 18.66 0.00 0.00 1.82
1133 1149 2.058001 CCCGGGCCCCTGAAATTTC 61.058 63.158 18.66 11.41 0.00 2.17
1134 1150 1.304879 CCGGGCCCCTGAAATTTCA 60.305 57.895 18.66 19.45 35.57 2.69
1143 1159 2.955609 TGAAATTTCAGGACCGGCC 58.044 52.632 16.91 3.58 32.50 6.13
1144 1160 0.610785 TGAAATTTCAGGACCGGCCC 60.611 55.000 16.91 0.00 37.37 5.80
1145 1161 0.323451 GAAATTTCAGGACCGGCCCT 60.323 55.000 2.07 2.07 37.37 5.19
1240 1256 3.073062 ACAGTCCTACTCAACATGGCTTT 59.927 43.478 0.00 0.00 0.00 3.51
1292 1308 4.082300 GTGAAGCAAGAGAGACTGATGAGA 60.082 45.833 0.00 0.00 0.00 3.27
1298 1314 5.395546 GCAAGAGAGACTGATGAGAAGGATT 60.396 44.000 0.00 0.00 0.00 3.01
1306 1322 4.160439 ACTGATGAGAAGGATTAGCGACAA 59.840 41.667 0.00 0.00 0.00 3.18
1355 1371 0.811915 ACAAGTCGATGACCCGAGAG 59.188 55.000 0.00 0.00 39.43 3.20
1496 1515 1.028868 GGCACTGATGAAGCTGGACC 61.029 60.000 0.00 0.00 0.00 4.46
1522 1541 6.546034 GTCATGGGGTAGTATTTTGCTATGTT 59.454 38.462 0.00 0.00 0.00 2.71
1523 1542 6.770785 TCATGGGGTAGTATTTTGCTATGTTC 59.229 38.462 0.00 0.00 0.00 3.18
1536 1568 7.977789 TTTGCTATGTTCAGTGATCTAAACA 57.022 32.000 0.00 0.00 36.41 2.83
1537 1569 8.565896 TTTGCTATGTTCAGTGATCTAAACAT 57.434 30.769 11.19 11.19 42.90 2.71
1647 1692 7.136119 TGTCCGTTAAGAAAATAAAGCTTGTG 58.864 34.615 0.00 0.00 0.00 3.33
1648 1693 6.581166 GTCCGTTAAGAAAATAAAGCTTGTGG 59.419 38.462 0.00 0.00 0.00 4.17
1649 1694 5.861787 CCGTTAAGAAAATAAAGCTTGTGGG 59.138 40.000 0.00 0.00 0.00 4.61
1650 1695 5.344933 CGTTAAGAAAATAAAGCTTGTGGGC 59.655 40.000 0.00 0.00 0.00 5.36
1651 1696 6.455647 GTTAAGAAAATAAAGCTTGTGGGCT 58.544 36.000 0.00 0.00 45.30 5.19
1652 1697 4.790765 AGAAAATAAAGCTTGTGGGCTC 57.209 40.909 0.00 0.00 42.24 4.70
1653 1698 4.151883 AGAAAATAAAGCTTGTGGGCTCA 58.848 39.130 0.00 0.00 42.24 4.26
1654 1699 4.774200 AGAAAATAAAGCTTGTGGGCTCAT 59.226 37.500 0.00 0.00 42.24 2.90
1655 1700 5.246883 AGAAAATAAAGCTTGTGGGCTCATT 59.753 36.000 0.00 0.00 42.24 2.57
1656 1701 4.725790 AATAAAGCTTGTGGGCTCATTC 57.274 40.909 0.00 0.00 42.24 2.67
1657 1702 0.883833 AAAGCTTGTGGGCTCATTCG 59.116 50.000 0.00 0.00 42.24 3.34
1658 1703 0.036732 AAGCTTGTGGGCTCATTCGA 59.963 50.000 0.00 0.00 42.24 3.71
1659 1704 0.254178 AGCTTGTGGGCTCATTCGAT 59.746 50.000 0.00 0.00 38.24 3.59
1660 1705 1.098050 GCTTGTGGGCTCATTCGATT 58.902 50.000 0.00 0.00 0.00 3.34
1661 1706 1.474077 GCTTGTGGGCTCATTCGATTT 59.526 47.619 0.00 0.00 0.00 2.17
1662 1707 2.733227 GCTTGTGGGCTCATTCGATTTG 60.733 50.000 0.00 0.00 0.00 2.32
1663 1708 1.462616 TGTGGGCTCATTCGATTTGG 58.537 50.000 0.00 0.00 0.00 3.28
1664 1709 1.004161 TGTGGGCTCATTCGATTTGGA 59.996 47.619 0.00 0.00 0.00 3.53
1665 1710 1.672881 GTGGGCTCATTCGATTTGGAG 59.327 52.381 0.00 0.00 0.00 3.86
1666 1711 1.312815 GGGCTCATTCGATTTGGAGG 58.687 55.000 0.00 0.00 0.00 4.30
1667 1712 1.134098 GGGCTCATTCGATTTGGAGGA 60.134 52.381 0.00 0.00 0.00 3.71
1668 1713 2.643551 GGCTCATTCGATTTGGAGGAA 58.356 47.619 0.00 0.00 0.00 3.36
1669 1714 3.016736 GGCTCATTCGATTTGGAGGAAA 58.983 45.455 0.00 0.00 0.00 3.13
1670 1715 3.633986 GGCTCATTCGATTTGGAGGAAAT 59.366 43.478 0.00 0.00 36.94 2.17
1671 1716 4.261363 GGCTCATTCGATTTGGAGGAAATC 60.261 45.833 0.00 0.00 44.61 2.17
1672 1717 4.578105 GCTCATTCGATTTGGAGGAAATCT 59.422 41.667 0.00 0.00 45.50 2.40
1673 1718 5.760253 GCTCATTCGATTTGGAGGAAATCTA 59.240 40.000 0.00 0.00 45.50 1.98
1674 1719 6.260936 GCTCATTCGATTTGGAGGAAATCTAA 59.739 38.462 0.00 0.00 45.50 2.10
1675 1720 7.201732 GCTCATTCGATTTGGAGGAAATCTAAA 60.202 37.037 0.00 0.00 45.50 1.85
1676 1721 7.985476 TCATTCGATTTGGAGGAAATCTAAAC 58.015 34.615 0.00 0.00 45.50 2.01
1677 1722 6.417191 TTCGATTTGGAGGAAATCTAAACG 57.583 37.500 0.00 0.00 45.50 3.60
1678 1723 5.484715 TCGATTTGGAGGAAATCTAAACGT 58.515 37.500 0.00 0.00 45.50 3.99
1679 1724 6.632909 TCGATTTGGAGGAAATCTAAACGTA 58.367 36.000 0.00 0.00 45.50 3.57
1680 1725 6.755141 TCGATTTGGAGGAAATCTAAACGTAG 59.245 38.462 0.00 0.00 45.50 3.51
1681 1726 6.018994 CGATTTGGAGGAAATCTAAACGTAGG 60.019 42.308 0.00 0.00 45.50 3.18
1682 1727 6.363167 TTTGGAGGAAATCTAAACGTAGGA 57.637 37.500 0.00 0.00 33.84 2.94
1683 1728 6.363167 TTGGAGGAAATCTAAACGTAGGAA 57.637 37.500 0.00 0.00 0.00 3.36
1684 1729 6.555463 TGGAGGAAATCTAAACGTAGGAAT 57.445 37.500 0.00 0.00 0.00 3.01
1685 1730 6.954232 TGGAGGAAATCTAAACGTAGGAATT 58.046 36.000 0.00 0.00 0.00 2.17
1686 1731 7.399634 TGGAGGAAATCTAAACGTAGGAATTT 58.600 34.615 0.00 0.00 0.00 1.82
1687 1732 7.335924 TGGAGGAAATCTAAACGTAGGAATTTG 59.664 37.037 0.00 0.00 0.00 2.32
1688 1733 7.551617 GGAGGAAATCTAAACGTAGGAATTTGA 59.448 37.037 0.00 0.00 0.00 2.69
1689 1734 8.857694 AGGAAATCTAAACGTAGGAATTTGAA 57.142 30.769 0.00 0.00 0.00 2.69
1690 1735 8.947115 AGGAAATCTAAACGTAGGAATTTGAAG 58.053 33.333 0.00 0.00 0.00 3.02
1691 1736 8.727910 GGAAATCTAAACGTAGGAATTTGAAGT 58.272 33.333 0.00 0.00 0.00 3.01
1694 1739 9.939802 AATCTAAACGTAGGAATTTGAAGTAGT 57.060 29.630 0.00 0.00 0.00 2.73
1718 1763 9.236006 AGTATATGAATTTTGATAGGATGGCAC 57.764 33.333 0.00 0.00 0.00 5.01
1719 1764 9.236006 GTATATGAATTTTGATAGGATGGCACT 57.764 33.333 0.00 0.00 0.00 4.40
1720 1765 8.716674 ATATGAATTTTGATAGGATGGCACTT 57.283 30.769 0.00 0.00 0.00 3.16
1721 1766 6.211587 TGAATTTTGATAGGATGGCACTTG 57.788 37.500 0.00 0.00 0.00 3.16
1722 1767 4.660789 ATTTTGATAGGATGGCACTTGC 57.339 40.909 0.00 0.00 41.14 4.01
1733 1778 3.935993 GCACTTGCCACTCTAAGGA 57.064 52.632 0.00 0.00 34.31 3.36
1734 1779 2.185004 GCACTTGCCACTCTAAGGAA 57.815 50.000 0.00 0.00 34.31 3.36
1735 1780 2.716217 GCACTTGCCACTCTAAGGAAT 58.284 47.619 0.00 0.00 34.31 3.01
1736 1781 3.084786 GCACTTGCCACTCTAAGGAATT 58.915 45.455 0.00 0.00 34.31 2.17
1737 1782 3.119708 GCACTTGCCACTCTAAGGAATTG 60.120 47.826 0.00 0.00 34.31 2.32
1738 1783 4.326826 CACTTGCCACTCTAAGGAATTGA 58.673 43.478 0.00 0.00 0.00 2.57
1739 1784 4.154918 CACTTGCCACTCTAAGGAATTGAC 59.845 45.833 0.00 0.00 0.00 3.18
1740 1785 4.042187 ACTTGCCACTCTAAGGAATTGACT 59.958 41.667 0.00 0.00 0.00 3.41
1741 1786 4.640771 TGCCACTCTAAGGAATTGACTT 57.359 40.909 0.00 0.00 0.00 3.01
1742 1787 4.326826 TGCCACTCTAAGGAATTGACTTG 58.673 43.478 2.97 0.00 0.00 3.16
1743 1788 3.127721 GCCACTCTAAGGAATTGACTTGC 59.872 47.826 2.97 0.00 0.00 4.01
1744 1789 3.691609 CCACTCTAAGGAATTGACTTGCC 59.308 47.826 2.97 0.00 0.00 4.52
1745 1790 4.566488 CCACTCTAAGGAATTGACTTGCCT 60.566 45.833 2.97 0.00 0.00 4.75
1746 1791 4.633565 CACTCTAAGGAATTGACTTGCCTC 59.366 45.833 2.97 0.00 0.00 4.70
1747 1792 3.861840 TCTAAGGAATTGACTTGCCTCG 58.138 45.455 2.97 0.00 0.00 4.63
1748 1793 2.568623 AAGGAATTGACTTGCCTCGT 57.431 45.000 0.00 0.00 0.00 4.18
1749 1794 2.568623 AGGAATTGACTTGCCTCGTT 57.431 45.000 0.00 0.00 0.00 3.85
1750 1795 2.427506 AGGAATTGACTTGCCTCGTTC 58.572 47.619 0.00 0.00 0.00 3.95
1751 1796 1.468914 GGAATTGACTTGCCTCGTTCC 59.531 52.381 0.00 0.00 0.00 3.62
1752 1797 2.427506 GAATTGACTTGCCTCGTTCCT 58.572 47.619 0.00 0.00 0.00 3.36
1753 1798 3.596214 GAATTGACTTGCCTCGTTCCTA 58.404 45.455 0.00 0.00 0.00 2.94
1754 1799 3.914426 ATTGACTTGCCTCGTTCCTAT 57.086 42.857 0.00 0.00 0.00 2.57
1755 1800 2.672961 TGACTTGCCTCGTTCCTATG 57.327 50.000 0.00 0.00 0.00 2.23
1756 1801 1.291132 GACTTGCCTCGTTCCTATGC 58.709 55.000 0.00 0.00 0.00 3.14
1757 1802 0.460284 ACTTGCCTCGTTCCTATGCG 60.460 55.000 0.00 0.00 0.00 4.73
1758 1803 1.766143 CTTGCCTCGTTCCTATGCGC 61.766 60.000 0.00 0.00 0.00 6.09
1759 1804 2.202878 GCCTCGTTCCTATGCGCA 60.203 61.111 14.96 14.96 0.00 6.09
1760 1805 1.813753 GCCTCGTTCCTATGCGCAA 60.814 57.895 17.11 2.72 0.00 4.85
1761 1806 1.366111 GCCTCGTTCCTATGCGCAAA 61.366 55.000 17.11 0.00 0.00 3.68
1762 1807 1.083489 CCTCGTTCCTATGCGCAAAA 58.917 50.000 17.11 4.61 0.00 2.44
1763 1808 1.670811 CCTCGTTCCTATGCGCAAAAT 59.329 47.619 17.11 0.00 0.00 1.82
1764 1809 2.539547 CCTCGTTCCTATGCGCAAAATG 60.540 50.000 17.11 12.19 0.00 2.32
1765 1810 2.351418 CTCGTTCCTATGCGCAAAATGA 59.649 45.455 17.11 15.67 0.00 2.57
1766 1811 2.351418 TCGTTCCTATGCGCAAAATGAG 59.649 45.455 17.11 6.92 0.00 2.90
1767 1812 2.454055 GTTCCTATGCGCAAAATGAGC 58.546 47.619 17.11 7.43 43.64 4.26
1768 1813 2.042686 TCCTATGCGCAAAATGAGCT 57.957 45.000 17.11 0.00 43.72 4.09
1769 1814 2.368439 TCCTATGCGCAAAATGAGCTT 58.632 42.857 17.11 0.00 43.72 3.74
1770 1815 2.754552 TCCTATGCGCAAAATGAGCTTT 59.245 40.909 17.11 0.00 43.72 3.51
1771 1816 2.855963 CCTATGCGCAAAATGAGCTTTG 59.144 45.455 17.11 0.00 43.72 2.77
1772 1817 2.728690 ATGCGCAAAATGAGCTTTGA 57.271 40.000 17.11 0.00 43.72 2.69
1773 1818 2.054687 TGCGCAAAATGAGCTTTGAG 57.945 45.000 8.16 0.00 43.72 3.02
1774 1819 1.337703 TGCGCAAAATGAGCTTTGAGT 59.662 42.857 8.16 0.00 43.72 3.41
1775 1820 1.717645 GCGCAAAATGAGCTTTGAGTG 59.282 47.619 0.30 0.00 40.12 3.51
1776 1821 2.322161 CGCAAAATGAGCTTTGAGTGG 58.678 47.619 0.00 0.00 38.35 4.00
1777 1822 2.030893 CGCAAAATGAGCTTTGAGTGGA 60.031 45.455 0.00 0.00 38.35 4.02
1778 1823 3.366679 CGCAAAATGAGCTTTGAGTGGAT 60.367 43.478 0.00 0.00 38.35 3.41
1779 1824 3.924686 GCAAAATGAGCTTTGAGTGGATG 59.075 43.478 0.00 0.00 38.35 3.51
1780 1825 4.560108 GCAAAATGAGCTTTGAGTGGATGT 60.560 41.667 0.00 0.00 38.35 3.06
1781 1826 5.335897 GCAAAATGAGCTTTGAGTGGATGTA 60.336 40.000 0.00 0.00 38.35 2.29
1782 1827 6.626623 GCAAAATGAGCTTTGAGTGGATGTAT 60.627 38.462 0.00 0.00 38.35 2.29
1783 1828 7.415541 GCAAAATGAGCTTTGAGTGGATGTATA 60.416 37.037 0.00 0.00 38.35 1.47
1784 1829 7.798596 AAATGAGCTTTGAGTGGATGTATAG 57.201 36.000 0.00 0.00 0.00 1.31
1785 1830 5.939764 TGAGCTTTGAGTGGATGTATAGT 57.060 39.130 0.00 0.00 0.00 2.12
1786 1831 6.299805 TGAGCTTTGAGTGGATGTATAGTT 57.700 37.500 0.00 0.00 0.00 2.24
1787 1832 6.711277 TGAGCTTTGAGTGGATGTATAGTTT 58.289 36.000 0.00 0.00 0.00 2.66
1788 1833 7.168219 TGAGCTTTGAGTGGATGTATAGTTTT 58.832 34.615 0.00 0.00 0.00 2.43
1789 1834 7.119699 TGAGCTTTGAGTGGATGTATAGTTTTG 59.880 37.037 0.00 0.00 0.00 2.44
1790 1835 6.942576 AGCTTTGAGTGGATGTATAGTTTTGT 59.057 34.615 0.00 0.00 0.00 2.83
1791 1836 7.448469 AGCTTTGAGTGGATGTATAGTTTTGTT 59.552 33.333 0.00 0.00 0.00 2.83
1792 1837 7.750903 GCTTTGAGTGGATGTATAGTTTTGTTC 59.249 37.037 0.00 0.00 0.00 3.18
1793 1838 8.684386 TTTGAGTGGATGTATAGTTTTGTTCA 57.316 30.769 0.00 0.00 0.00 3.18
1794 1839 8.684386 TTGAGTGGATGTATAGTTTTGTTCAA 57.316 30.769 0.00 0.00 0.00 2.69
1795 1840 8.684386 TGAGTGGATGTATAGTTTTGTTCAAA 57.316 30.769 0.00 0.00 0.00 2.69
1796 1841 9.126151 TGAGTGGATGTATAGTTTTGTTCAAAA 57.874 29.630 6.61 6.61 0.00 2.44
1797 1842 9.612620 GAGTGGATGTATAGTTTTGTTCAAAAG 57.387 33.333 10.40 0.00 0.00 2.27
1798 1843 8.082242 AGTGGATGTATAGTTTTGTTCAAAAGC 58.918 33.333 10.40 6.69 0.00 3.51
1799 1844 7.865385 GTGGATGTATAGTTTTGTTCAAAAGCA 59.135 33.333 10.40 3.30 0.00 3.91
1800 1845 8.584157 TGGATGTATAGTTTTGTTCAAAAGCAT 58.416 29.630 10.40 9.20 0.00 3.79
1804 1849 9.290988 TGTATAGTTTTGTTCAAAAGCATAGGA 57.709 29.630 10.40 1.22 0.00 2.94
1808 1853 8.369218 AGTTTTGTTCAAAAGCATAGGAAATG 57.631 30.769 10.40 0.00 0.00 2.32
1809 1854 8.203485 AGTTTTGTTCAAAAGCATAGGAAATGA 58.797 29.630 10.40 0.00 0.00 2.57
1810 1855 8.825745 GTTTTGTTCAAAAGCATAGGAAATGAA 58.174 29.630 10.40 0.00 0.00 2.57
1811 1856 9.558396 TTTTGTTCAAAAGCATAGGAAATGAAT 57.442 25.926 6.61 0.00 0.00 2.57
1837 1882 3.698029 TCCTACGAAATACCTGTACGC 57.302 47.619 0.00 0.00 0.00 4.42
1838 1883 3.282021 TCCTACGAAATACCTGTACGCT 58.718 45.455 0.00 0.00 0.00 5.07
1839 1884 3.696051 TCCTACGAAATACCTGTACGCTT 59.304 43.478 0.00 0.00 0.00 4.68
1840 1885 4.158394 TCCTACGAAATACCTGTACGCTTT 59.842 41.667 0.00 0.00 0.00 3.51
1841 1886 4.501921 CCTACGAAATACCTGTACGCTTTC 59.498 45.833 0.00 0.00 0.00 2.62
1842 1887 3.256558 ACGAAATACCTGTACGCTTTCC 58.743 45.455 0.00 0.00 0.00 3.13
1843 1888 3.056322 ACGAAATACCTGTACGCTTTCCT 60.056 43.478 0.00 0.00 0.00 3.36
1844 1889 4.158394 ACGAAATACCTGTACGCTTTCCTA 59.842 41.667 0.00 0.00 0.00 2.94
1845 1890 4.501921 CGAAATACCTGTACGCTTTCCTAC 59.498 45.833 0.00 0.00 0.00 3.18
1846 1891 5.410355 AAATACCTGTACGCTTTCCTACA 57.590 39.130 0.00 0.00 0.00 2.74
1847 1892 5.410355 AATACCTGTACGCTTTCCTACAA 57.590 39.130 0.00 0.00 0.00 2.41
1848 1893 3.756933 ACCTGTACGCTTTCCTACAAA 57.243 42.857 0.00 0.00 0.00 2.83
1849 1894 3.396560 ACCTGTACGCTTTCCTACAAAC 58.603 45.455 0.00 0.00 0.00 2.93
1850 1895 2.740447 CCTGTACGCTTTCCTACAAACC 59.260 50.000 0.00 0.00 0.00 3.27
1851 1896 2.406130 TGTACGCTTTCCTACAAACCG 58.594 47.619 0.00 0.00 0.00 4.44
1852 1897 2.035704 TGTACGCTTTCCTACAAACCGA 59.964 45.455 0.00 0.00 0.00 4.69
1853 1898 2.243602 ACGCTTTCCTACAAACCGAA 57.756 45.000 0.00 0.00 0.00 4.30
1854 1899 2.774687 ACGCTTTCCTACAAACCGAAT 58.225 42.857 0.00 0.00 0.00 3.34
1855 1900 2.482721 ACGCTTTCCTACAAACCGAATG 59.517 45.455 0.00 0.00 0.00 2.67
1856 1901 2.727916 CGCTTTCCTACAAACCGAATGC 60.728 50.000 0.00 0.00 34.85 3.56
1857 1902 2.227865 GCTTTCCTACAAACCGAATGCA 59.772 45.455 0.00 0.00 36.92 3.96
1858 1903 3.119495 GCTTTCCTACAAACCGAATGCAT 60.119 43.478 0.00 0.00 36.92 3.96
1859 1904 4.095782 GCTTTCCTACAAACCGAATGCATA 59.904 41.667 0.00 0.00 36.92 3.14
1860 1905 5.221048 GCTTTCCTACAAACCGAATGCATAT 60.221 40.000 0.00 0.00 36.92 1.78
1861 1906 6.017440 GCTTTCCTACAAACCGAATGCATATA 60.017 38.462 0.00 0.00 36.92 0.86
1862 1907 7.308589 GCTTTCCTACAAACCGAATGCATATAT 60.309 37.037 0.00 0.00 36.92 0.86
1863 1908 9.214957 CTTTCCTACAAACCGAATGCATATATA 57.785 33.333 0.00 0.00 0.00 0.86
1864 1909 8.771920 TTCCTACAAACCGAATGCATATATAG 57.228 34.615 0.00 0.00 0.00 1.31
1865 1910 7.327975 TCCTACAAACCGAATGCATATATAGG 58.672 38.462 0.00 1.89 0.00 2.57
1866 1911 7.179516 TCCTACAAACCGAATGCATATATAGGA 59.820 37.037 0.00 6.03 32.78 2.94
1867 1912 7.822334 CCTACAAACCGAATGCATATATAGGAA 59.178 37.037 0.00 0.00 0.00 3.36
1868 1913 9.214957 CTACAAACCGAATGCATATATAGGAAA 57.785 33.333 0.00 0.00 0.00 3.13
1869 1914 8.635765 ACAAACCGAATGCATATATAGGAAAT 57.364 30.769 0.00 0.00 0.00 2.17
1870 1915 9.077885 ACAAACCGAATGCATATATAGGAAATT 57.922 29.630 0.00 0.00 0.00 1.82
1871 1916 9.912634 CAAACCGAATGCATATATAGGAAATTT 57.087 29.630 0.00 0.00 0.00 1.82
1887 1932 6.114187 GGAAATTTTCCTTGGAATCCTTGT 57.886 37.500 19.01 0.00 46.57 3.16
1888 1933 6.533730 GGAAATTTTCCTTGGAATCCTTGTT 58.466 36.000 19.01 0.00 46.57 2.83
1889 1934 6.650807 GGAAATTTTCCTTGGAATCCTTGTTC 59.349 38.462 19.01 6.45 46.57 3.18
1890 1935 5.745312 ATTTTCCTTGGAATCCTTGTTCC 57.255 39.130 0.00 0.00 46.35 3.62
1891 1936 2.899303 TCCTTGGAATCCTTGTTCCC 57.101 50.000 0.00 0.00 45.73 3.97
1892 1937 2.069775 TCCTTGGAATCCTTGTTCCCA 58.930 47.619 0.00 0.00 45.73 4.37
1893 1938 2.654385 TCCTTGGAATCCTTGTTCCCAT 59.346 45.455 0.00 0.00 45.73 4.00
1894 1939 2.762327 CCTTGGAATCCTTGTTCCCATG 59.238 50.000 0.00 0.00 45.73 3.66
1895 1940 3.434309 CTTGGAATCCTTGTTCCCATGT 58.566 45.455 0.00 0.00 45.73 3.21
1896 1941 3.541242 TGGAATCCTTGTTCCCATGTT 57.459 42.857 0.00 0.00 45.73 2.71
1897 1942 3.855668 TGGAATCCTTGTTCCCATGTTT 58.144 40.909 0.00 0.00 45.73 2.83
1898 1943 4.230455 TGGAATCCTTGTTCCCATGTTTT 58.770 39.130 0.00 0.00 45.73 2.43
1899 1944 4.657969 TGGAATCCTTGTTCCCATGTTTTT 59.342 37.500 0.00 0.00 45.73 1.94
1900 1945 5.221621 TGGAATCCTTGTTCCCATGTTTTTC 60.222 40.000 0.00 0.00 45.73 2.29
1901 1946 4.890158 ATCCTTGTTCCCATGTTTTTCC 57.110 40.909 0.00 0.00 0.00 3.13
1902 1947 3.922375 TCCTTGTTCCCATGTTTTTCCT 58.078 40.909 0.00 0.00 0.00 3.36
1903 1948 5.068215 TCCTTGTTCCCATGTTTTTCCTA 57.932 39.130 0.00 0.00 0.00 2.94
1904 1949 5.650283 TCCTTGTTCCCATGTTTTTCCTAT 58.350 37.500 0.00 0.00 0.00 2.57
1905 1950 6.795590 TCCTTGTTCCCATGTTTTTCCTATA 58.204 36.000 0.00 0.00 0.00 1.31
1906 1951 7.242359 TCCTTGTTCCCATGTTTTTCCTATAA 58.758 34.615 0.00 0.00 0.00 0.98
1907 1952 7.730784 TCCTTGTTCCCATGTTTTTCCTATAAA 59.269 33.333 0.00 0.00 0.00 1.40
1908 1953 8.371699 CCTTGTTCCCATGTTTTTCCTATAAAA 58.628 33.333 0.00 0.00 0.00 1.52
1909 1954 9.771534 CTTGTTCCCATGTTTTTCCTATAAAAA 57.228 29.630 0.00 0.00 0.00 1.94
1911 1956 9.936759 TGTTCCCATGTTTTTCCTATAAAAATC 57.063 29.630 0.00 0.00 32.55 2.17
1912 1957 9.378551 GTTCCCATGTTTTTCCTATAAAAATCC 57.621 33.333 0.00 0.00 32.55 3.01
1913 1958 8.909423 TCCCATGTTTTTCCTATAAAAATCCT 57.091 30.769 0.00 0.00 32.55 3.24
1914 1959 8.977412 TCCCATGTTTTTCCTATAAAAATCCTC 58.023 33.333 0.00 0.00 32.55 3.71
1915 1960 8.204160 CCCATGTTTTTCCTATAAAAATCCTCC 58.796 37.037 0.00 0.00 32.55 4.30
1916 1961 8.757877 CCATGTTTTTCCTATAAAAATCCTCCA 58.242 33.333 0.00 0.00 32.55 3.86
1919 1964 9.990360 TGTTTTTCCTATAAAAATCCTCCAAAC 57.010 29.630 0.00 0.00 32.55 2.93
1920 1965 9.431887 GTTTTTCCTATAAAAATCCTCCAAACC 57.568 33.333 0.00 0.00 32.55 3.27
1921 1966 7.399245 TTTCCTATAAAAATCCTCCAAACCG 57.601 36.000 0.00 0.00 0.00 4.44
1922 1967 6.316280 TCCTATAAAAATCCTCCAAACCGA 57.684 37.500 0.00 0.00 0.00 4.69
1923 1968 6.723339 TCCTATAAAAATCCTCCAAACCGAA 58.277 36.000 0.00 0.00 0.00 4.30
1924 1969 7.351166 TCCTATAAAAATCCTCCAAACCGAAT 58.649 34.615 0.00 0.00 0.00 3.34
1925 1970 7.284489 TCCTATAAAAATCCTCCAAACCGAATG 59.716 37.037 0.00 0.00 0.00 2.67
1926 1971 7.284489 CCTATAAAAATCCTCCAAACCGAATGA 59.716 37.037 0.00 0.00 0.00 2.57
1927 1972 5.391312 AAAAATCCTCCAAACCGAATGAG 57.609 39.130 0.00 0.00 0.00 2.90
1928 1973 2.717639 ATCCTCCAAACCGAATGAGG 57.282 50.000 0.00 0.00 44.69 3.86
1929 1974 0.035439 TCCTCCAAACCGAATGAGGC 60.035 55.000 0.00 0.00 43.33 4.70
1930 1975 0.322456 CCTCCAAACCGAATGAGGCA 60.322 55.000 0.00 0.00 38.12 4.75
1931 1976 1.683011 CCTCCAAACCGAATGAGGCAT 60.683 52.381 0.00 0.00 38.12 4.40
1932 1977 1.402968 CTCCAAACCGAATGAGGCATG 59.597 52.381 0.00 0.00 33.69 4.06
1933 1978 1.176527 CCAAACCGAATGAGGCATGT 58.823 50.000 0.00 0.00 33.69 3.21
1976 2021 2.830704 GAAGTACTCGGGCCCACACG 62.831 65.000 24.92 7.84 0.00 4.49
2005 2054 1.822581 TCGTAGATGAATCACGTGCG 58.177 50.000 11.67 5.34 34.92 5.34
2134 2336 2.643801 ACTCCGTATTTTTGGGTGGGTA 59.356 45.455 0.00 0.00 0.00 3.69
2359 2884 6.046593 TCTGTTAAAACTTGACACGATGAGT 58.953 36.000 0.00 0.00 0.00 3.41
2418 2974 8.715190 AAAGCTCTAAACCCTAAACCATAAAA 57.285 30.769 0.00 0.00 0.00 1.52
2522 3084 2.971660 TGTTCGAGTGACCTTGTTCA 57.028 45.000 0.00 0.00 0.00 3.18
2528 3090 4.258543 TCGAGTGACCTTGTTCAAAAGTT 58.741 39.130 0.00 0.00 0.00 2.66
2634 3197 6.094603 AGCTAAAATAAACAGCATGAGAGGTG 59.905 38.462 0.00 0.00 39.69 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.216117 TCTTAAAAAGGAGAAACGGATTAGAAG 57.784 33.333 0.00 0.00 0.00 2.85
116 117 5.011533 TGTGCCACCTAAAAATATTGTGCTT 59.988 36.000 0.00 0.00 0.00 3.91
192 194 5.940470 AGAGGTCCAACAGCAGTTAAAATAG 59.060 40.000 0.00 0.00 35.85 1.73
203 205 7.094377 TGTCAAATTAATAAGAGGTCCAACAGC 60.094 37.037 0.00 0.00 0.00 4.40
379 382 2.801483 TGCTAAGCCAAATTGCCACTA 58.199 42.857 0.00 0.00 0.00 2.74
409 412 0.112995 TCCCCCTAATGATGCCATGC 59.887 55.000 0.00 0.00 32.36 4.06
445 448 6.350445 GGGAAGATTACGTAACACCTCAAGTA 60.350 42.308 10.81 0.00 0.00 2.24
561 564 6.053005 CCCGCCAATAAGACTTACTCAATTA 58.947 40.000 0.00 0.00 0.00 1.40
659 671 5.178096 ACCATCAAATCCTCACATACACA 57.822 39.130 0.00 0.00 0.00 3.72
762 778 7.288389 TCCAATTAATTTCAGCTTGGCTATCAT 59.712 33.333 0.00 0.00 36.40 2.45
769 785 5.920193 TCCTCCAATTAATTTCAGCTTGG 57.080 39.130 0.00 0.00 38.14 3.61
770 786 7.549839 TGAATCCTCCAATTAATTTCAGCTTG 58.450 34.615 0.00 0.00 0.00 4.01
771 787 7.722949 TGAATCCTCCAATTAATTTCAGCTT 57.277 32.000 0.00 0.00 0.00 3.74
772 788 7.722949 TTGAATCCTCCAATTAATTTCAGCT 57.277 32.000 0.00 0.00 0.00 4.24
773 789 8.953368 AATTGAATCCTCCAATTAATTTCAGC 57.047 30.769 0.00 0.00 41.03 4.26
785 801 9.524496 CCTTATCATATTGAATTGAATCCTCCA 57.476 33.333 0.00 0.00 0.00 3.86
786 802 9.525826 ACCTTATCATATTGAATTGAATCCTCC 57.474 33.333 0.00 0.00 0.00 4.30
788 804 9.305555 CCACCTTATCATATTGAATTGAATCCT 57.694 33.333 0.00 0.00 0.00 3.24
789 805 8.031277 GCCACCTTATCATATTGAATTGAATCC 58.969 37.037 0.00 0.00 0.00 3.01
790 806 8.579006 TGCCACCTTATCATATTGAATTGAATC 58.421 33.333 0.00 0.00 0.00 2.52
791 807 8.481492 TGCCACCTTATCATATTGAATTGAAT 57.519 30.769 0.00 0.00 0.00 2.57
792 808 7.894753 TGCCACCTTATCATATTGAATTGAA 57.105 32.000 0.00 0.00 0.00 2.69
793 809 7.894753 TTGCCACCTTATCATATTGAATTGA 57.105 32.000 0.00 0.00 0.00 2.57
794 810 8.945481 TTTTGCCACCTTATCATATTGAATTG 57.055 30.769 0.00 0.00 0.00 2.32
809 825 9.651913 CAACACTAATAATTAATTTTGCCACCT 57.348 29.630 5.91 0.00 0.00 4.00
810 826 8.387354 GCAACACTAATAATTAATTTTGCCACC 58.613 33.333 15.74 0.00 33.99 4.61
811 827 8.930760 TGCAACACTAATAATTAATTTTGCCAC 58.069 29.630 20.54 3.81 37.02 5.01
812 828 9.494271 TTGCAACACTAATAATTAATTTTGCCA 57.506 25.926 20.54 12.24 37.02 4.92
829 845 8.947115 GGTAGAATAACTAGAATTTGCAACACT 58.053 33.333 0.00 1.36 0.00 3.55
830 846 8.947115 AGGTAGAATAACTAGAATTTGCAACAC 58.053 33.333 0.00 0.00 36.37 3.32
831 847 8.946085 CAGGTAGAATAACTAGAATTTGCAACA 58.054 33.333 0.00 0.00 35.55 3.33
832 848 7.910683 GCAGGTAGAATAACTAGAATTTGCAAC 59.089 37.037 0.00 0.00 35.55 4.17
833 849 7.201609 CGCAGGTAGAATAACTAGAATTTGCAA 60.202 37.037 0.00 0.00 35.55 4.08
834 850 6.257849 CGCAGGTAGAATAACTAGAATTTGCA 59.742 38.462 0.00 0.00 35.55 4.08
835 851 6.258068 ACGCAGGTAGAATAACTAGAATTTGC 59.742 38.462 0.00 2.09 35.55 3.68
836 852 7.621991 CACGCAGGTAGAATAACTAGAATTTG 58.378 38.462 0.00 0.00 35.55 2.32
837 853 6.258068 GCACGCAGGTAGAATAACTAGAATTT 59.742 38.462 0.00 0.00 35.55 1.82
838 854 5.753921 GCACGCAGGTAGAATAACTAGAATT 59.246 40.000 0.00 0.00 35.55 2.17
839 855 5.290386 GCACGCAGGTAGAATAACTAGAAT 58.710 41.667 0.00 0.00 35.55 2.40
840 856 4.441079 GGCACGCAGGTAGAATAACTAGAA 60.441 45.833 0.00 0.00 35.55 2.10
841 857 3.067742 GGCACGCAGGTAGAATAACTAGA 59.932 47.826 0.00 0.00 35.55 2.43
842 858 3.181479 TGGCACGCAGGTAGAATAACTAG 60.181 47.826 0.00 0.00 35.55 2.57
843 859 2.761767 TGGCACGCAGGTAGAATAACTA 59.238 45.455 0.00 0.00 35.55 2.24
844 860 1.553248 TGGCACGCAGGTAGAATAACT 59.447 47.619 0.00 0.00 41.12 2.24
845 861 1.664151 GTGGCACGCAGGTAGAATAAC 59.336 52.381 0.00 0.00 39.55 1.89
846 862 1.406341 GGTGGCACGCAGGTAGAATAA 60.406 52.381 12.17 0.00 43.02 1.40
847 863 0.177141 GGTGGCACGCAGGTAGAATA 59.823 55.000 12.17 0.00 43.02 1.75
848 864 1.078426 GGTGGCACGCAGGTAGAAT 60.078 57.895 12.17 0.00 43.02 2.40
849 865 2.345991 GGTGGCACGCAGGTAGAA 59.654 61.111 12.17 0.00 43.02 2.10
850 866 2.920384 TGGTGGCACGCAGGTAGA 60.920 61.111 12.17 0.00 43.02 2.59
851 867 2.434884 CTGGTGGCACGCAGGTAG 60.435 66.667 21.34 7.07 43.02 3.18
852 868 4.015406 CCTGGTGGCACGCAGGTA 62.015 66.667 30.97 9.12 43.02 3.08
855 871 2.842394 CTACTCCTGGTGGCACGCAG 62.842 65.000 21.84 21.84 43.02 5.18
856 872 2.920384 TACTCCTGGTGGCACGCA 60.920 61.111 12.17 9.88 43.02 5.24
857 873 2.125512 CTACTCCTGGTGGCACGC 60.126 66.667 12.17 5.35 38.67 5.34
858 874 0.389948 GAACTACTCCTGGTGGCACG 60.390 60.000 12.17 0.00 0.00 5.34
859 875 0.685097 TGAACTACTCCTGGTGGCAC 59.315 55.000 9.70 9.70 0.00 5.01
860 876 1.429930 TTGAACTACTCCTGGTGGCA 58.570 50.000 0.33 0.00 0.00 4.92
861 877 2.561478 TTTGAACTACTCCTGGTGGC 57.439 50.000 0.33 0.00 0.00 5.01
862 878 5.805728 AGTAATTTGAACTACTCCTGGTGG 58.194 41.667 0.33 0.00 0.00 4.61
863 879 7.661847 AGAAAGTAATTTGAACTACTCCTGGTG 59.338 37.037 0.00 0.00 0.00 4.17
864 880 7.661847 CAGAAAGTAATTTGAACTACTCCTGGT 59.338 37.037 0.00 0.00 31.69 4.00
865 881 7.661847 ACAGAAAGTAATTTGAACTACTCCTGG 59.338 37.037 13.81 0.00 35.37 4.45
866 882 8.608844 ACAGAAAGTAATTTGAACTACTCCTG 57.391 34.615 0.00 10.43 36.19 3.86
867 883 9.628500 AAACAGAAAGTAATTTGAACTACTCCT 57.372 29.630 0.00 0.00 0.00 3.69
868 884 9.665264 CAAACAGAAAGTAATTTGAACTACTCC 57.335 33.333 0.00 0.00 34.62 3.85
869 885 9.170584 GCAAACAGAAAGTAATTTGAACTACTC 57.829 33.333 0.00 0.00 34.62 2.59
870 886 8.135529 GGCAAACAGAAAGTAATTTGAACTACT 58.864 33.333 0.00 0.00 34.62 2.57
871 887 7.918562 TGGCAAACAGAAAGTAATTTGAACTAC 59.081 33.333 0.00 0.00 34.62 2.73
872 888 8.001881 TGGCAAACAGAAAGTAATTTGAACTA 57.998 30.769 0.00 0.00 34.62 2.24
873 889 6.872920 TGGCAAACAGAAAGTAATTTGAACT 58.127 32.000 0.00 0.00 34.62 3.01
874 890 7.532682 TTGGCAAACAGAAAGTAATTTGAAC 57.467 32.000 0.00 0.00 34.62 3.18
875 891 7.821846 AGTTTGGCAAACAGAAAGTAATTTGAA 59.178 29.630 36.37 0.00 43.79 2.69
876 892 7.327214 AGTTTGGCAAACAGAAAGTAATTTGA 58.673 30.769 36.37 0.00 43.79 2.69
877 893 7.538303 AGTTTGGCAAACAGAAAGTAATTTG 57.462 32.000 36.37 0.00 43.79 2.32
878 894 9.260002 CATAGTTTGGCAAACAGAAAGTAATTT 57.740 29.630 36.37 18.55 43.79 1.82
879 895 7.872483 CCATAGTTTGGCAAACAGAAAGTAATT 59.128 33.333 36.37 18.99 43.79 1.40
880 896 7.232534 TCCATAGTTTGGCAAACAGAAAGTAAT 59.767 33.333 36.37 19.61 46.01 1.89
881 897 6.547880 TCCATAGTTTGGCAAACAGAAAGTAA 59.452 34.615 36.37 16.29 46.01 2.24
882 898 6.065374 TCCATAGTTTGGCAAACAGAAAGTA 58.935 36.000 36.37 22.69 46.01 2.24
883 899 4.892934 TCCATAGTTTGGCAAACAGAAAGT 59.107 37.500 36.37 21.47 46.01 2.66
884 900 5.452078 TCCATAGTTTGGCAAACAGAAAG 57.548 39.130 36.37 23.24 46.01 2.62
885 901 5.860941 TTCCATAGTTTGGCAAACAGAAA 57.139 34.783 36.37 22.36 46.01 2.52
886 902 7.716799 ATATTCCATAGTTTGGCAAACAGAA 57.283 32.000 36.37 30.24 46.01 3.02
887 903 7.831690 TGTATATTCCATAGTTTGGCAAACAGA 59.168 33.333 36.37 26.53 46.01 3.41
888 904 7.995289 TGTATATTCCATAGTTTGGCAAACAG 58.005 34.615 36.37 26.41 46.01 3.16
889 905 7.946381 TGTATATTCCATAGTTTGGCAAACA 57.054 32.000 36.37 25.07 46.01 2.83
890 906 9.248291 CATTGTATATTCCATAGTTTGGCAAAC 57.752 33.333 30.67 30.67 46.01 2.93
891 907 7.925483 GCATTGTATATTCCATAGTTTGGCAAA 59.075 33.333 8.93 8.93 46.01 3.68
892 908 7.069208 TGCATTGTATATTCCATAGTTTGGCAA 59.931 33.333 0.00 0.00 46.01 4.52
893 909 6.548993 TGCATTGTATATTCCATAGTTTGGCA 59.451 34.615 0.00 0.00 46.01 4.92
894 910 6.980593 TGCATTGTATATTCCATAGTTTGGC 58.019 36.000 0.00 0.00 46.01 4.52
896 912 8.795513 TCCATGCATTGTATATTCCATAGTTTG 58.204 33.333 0.00 0.00 0.00 2.93
897 913 8.938801 TCCATGCATTGTATATTCCATAGTTT 57.061 30.769 0.00 0.00 0.00 2.66
898 914 8.796475 GTTCCATGCATTGTATATTCCATAGTT 58.204 33.333 0.00 0.00 0.00 2.24
899 915 8.166061 AGTTCCATGCATTGTATATTCCATAGT 58.834 33.333 0.00 0.00 0.00 2.12
900 916 8.571461 AGTTCCATGCATTGTATATTCCATAG 57.429 34.615 0.00 0.00 0.00 2.23
901 917 8.938801 AAGTTCCATGCATTGTATATTCCATA 57.061 30.769 0.00 0.00 0.00 2.74
902 918 7.039504 GGAAGTTCCATGCATTGTATATTCCAT 60.040 37.037 17.44 0.00 36.28 3.41
903 919 6.265196 GGAAGTTCCATGCATTGTATATTCCA 59.735 38.462 17.44 0.00 36.28 3.53
904 920 6.294731 GGGAAGTTCCATGCATTGTATATTCC 60.295 42.308 23.33 13.94 38.64 3.01
905 921 6.265196 TGGGAAGTTCCATGCATTGTATATTC 59.735 38.462 23.33 0.85 38.64 1.75
906 922 6.135454 TGGGAAGTTCCATGCATTGTATATT 58.865 36.000 23.33 0.00 38.64 1.28
907 923 5.704354 TGGGAAGTTCCATGCATTGTATAT 58.296 37.500 23.33 0.00 38.64 0.86
908 924 5.122707 TGGGAAGTTCCATGCATTGTATA 57.877 39.130 23.33 0.00 38.64 1.47
909 925 3.956199 CTGGGAAGTTCCATGCATTGTAT 59.044 43.478 23.33 0.00 38.64 2.29
910 926 3.245229 ACTGGGAAGTTCCATGCATTGTA 60.245 43.478 23.33 0.00 38.64 2.41
911 927 2.173519 CTGGGAAGTTCCATGCATTGT 58.826 47.619 23.33 0.00 38.64 2.71
912 928 2.165030 GACTGGGAAGTTCCATGCATTG 59.835 50.000 23.33 0.00 38.64 2.82
913 929 2.225091 TGACTGGGAAGTTCCATGCATT 60.225 45.455 23.33 6.72 38.64 3.56
914 930 1.355381 TGACTGGGAAGTTCCATGCAT 59.645 47.619 23.33 0.00 38.64 3.96
915 931 0.770499 TGACTGGGAAGTTCCATGCA 59.230 50.000 23.33 11.21 38.64 3.96
916 932 1.909700 TTGACTGGGAAGTTCCATGC 58.090 50.000 23.33 6.96 38.64 4.06
917 933 4.523943 TGATTTTGACTGGGAAGTTCCATG 59.476 41.667 23.33 16.34 38.64 3.66
918 934 4.739793 TGATTTTGACTGGGAAGTTCCAT 58.260 39.130 23.33 8.20 38.64 3.41
919 935 4.177537 TGATTTTGACTGGGAAGTTCCA 57.822 40.909 23.33 8.80 38.64 3.53
920 936 6.180472 TCTATGATTTTGACTGGGAAGTTCC 58.820 40.000 13.99 13.99 35.23 3.62
921 937 7.687941 TTCTATGATTTTGACTGGGAAGTTC 57.312 36.000 0.00 0.00 0.00 3.01
922 938 8.477419 TTTTCTATGATTTTGACTGGGAAGTT 57.523 30.769 0.00 0.00 0.00 2.66
923 939 8.477419 TTTTTCTATGATTTTGACTGGGAAGT 57.523 30.769 0.00 0.00 0.00 3.01
924 940 8.579863 ACTTTTTCTATGATTTTGACTGGGAAG 58.420 33.333 0.00 0.00 0.00 3.46
925 941 8.359642 CACTTTTTCTATGATTTTGACTGGGAA 58.640 33.333 0.00 0.00 0.00 3.97
926 942 7.723616 TCACTTTTTCTATGATTTTGACTGGGA 59.276 33.333 0.00 0.00 0.00 4.37
927 943 7.885297 TCACTTTTTCTATGATTTTGACTGGG 58.115 34.615 0.00 0.00 0.00 4.45
928 944 8.786898 TCTCACTTTTTCTATGATTTTGACTGG 58.213 33.333 0.00 0.00 0.00 4.00
972 988 9.543783 GTCGACCTAGTTCCAAAATCTAATTAT 57.456 33.333 3.51 0.00 0.00 1.28
973 989 7.983484 GGTCGACCTAGTTCCAAAATCTAATTA 59.017 37.037 27.64 0.00 0.00 1.40
974 990 6.822170 GGTCGACCTAGTTCCAAAATCTAATT 59.178 38.462 27.64 0.00 0.00 1.40
975 991 6.070424 TGGTCGACCTAGTTCCAAAATCTAAT 60.070 38.462 33.39 0.00 36.82 1.73
976 992 5.246656 TGGTCGACCTAGTTCCAAAATCTAA 59.753 40.000 33.39 5.67 36.82 2.10
977 993 4.773674 TGGTCGACCTAGTTCCAAAATCTA 59.226 41.667 33.39 6.08 36.82 1.98
978 994 3.581332 TGGTCGACCTAGTTCCAAAATCT 59.419 43.478 33.39 0.00 36.82 2.40
979 995 3.933332 CTGGTCGACCTAGTTCCAAAATC 59.067 47.826 33.39 3.99 36.82 2.17
980 996 3.868754 GCTGGTCGACCTAGTTCCAAAAT 60.869 47.826 33.39 0.00 36.82 1.82
981 997 2.549349 GCTGGTCGACCTAGTTCCAAAA 60.549 50.000 33.39 9.83 36.82 2.44
982 998 1.001633 GCTGGTCGACCTAGTTCCAAA 59.998 52.381 33.39 10.58 36.82 3.28
983 999 0.606604 GCTGGTCGACCTAGTTCCAA 59.393 55.000 33.39 11.33 36.82 3.53
984 1000 0.251653 AGCTGGTCGACCTAGTTCCA 60.252 55.000 33.39 12.15 36.82 3.53
985 1001 0.173708 CAGCTGGTCGACCTAGTTCC 59.826 60.000 33.39 16.11 36.82 3.62
986 1002 0.173708 CCAGCTGGTCGACCTAGTTC 59.826 60.000 33.39 17.56 36.82 3.01
987 1003 2.277858 CCAGCTGGTCGACCTAGTT 58.722 57.895 33.39 22.84 36.82 2.24
988 1004 4.019983 CCAGCTGGTCGACCTAGT 57.980 61.111 33.39 15.86 36.82 2.57
998 1014 2.629656 CGAGGGCAAAACCAGCTGG 61.630 63.158 31.60 31.60 42.05 4.85
999 1015 0.962356 ATCGAGGGCAAAACCAGCTG 60.962 55.000 6.78 6.78 42.05 4.24
1000 1016 0.962356 CATCGAGGGCAAAACCAGCT 60.962 55.000 0.00 0.00 42.05 4.24
1001 1017 0.960364 TCATCGAGGGCAAAACCAGC 60.960 55.000 0.00 0.00 42.05 4.85
1002 1018 1.755179 ATCATCGAGGGCAAAACCAG 58.245 50.000 0.00 0.00 42.05 4.00
1003 1019 3.358111 TTATCATCGAGGGCAAAACCA 57.642 42.857 0.00 0.00 42.05 3.67
1004 1020 4.712122 TTTTATCATCGAGGGCAAAACC 57.288 40.909 0.00 0.00 37.93 3.27
1075 1091 9.245481 CGGGGCCCTTTATATATACAAAATTAA 57.755 33.333 24.38 0.00 0.00 1.40
1076 1092 8.613034 TCGGGGCCCTTTATATATACAAAATTA 58.387 33.333 24.38 0.00 0.00 1.40
1077 1093 7.471890 TCGGGGCCCTTTATATATACAAAATT 58.528 34.615 24.38 0.00 0.00 1.82
1078 1094 7.034967 TCGGGGCCCTTTATATATACAAAAT 57.965 36.000 24.38 0.00 0.00 1.82
1079 1095 6.451292 TCGGGGCCCTTTATATATACAAAA 57.549 37.500 24.38 0.00 0.00 2.44
1080 1096 6.645884 ATCGGGGCCCTTTATATATACAAA 57.354 37.500 24.38 0.00 0.00 2.83
1081 1097 6.645884 AATCGGGGCCCTTTATATATACAA 57.354 37.500 24.38 0.00 0.00 2.41
1082 1098 7.941053 ATAATCGGGGCCCTTTATATATACA 57.059 36.000 24.38 0.00 0.00 2.29
1083 1099 9.097946 AGTATAATCGGGGCCCTTTATATATAC 57.902 37.037 25.43 22.72 0.00 1.47
1084 1100 9.678981 AAGTATAATCGGGGCCCTTTATATATA 57.321 33.333 25.43 13.82 0.00 0.86
1085 1101 8.577164 AAGTATAATCGGGGCCCTTTATATAT 57.423 34.615 25.43 18.59 0.00 0.86
1086 1102 7.071572 GGAAGTATAATCGGGGCCCTTTATATA 59.928 40.741 25.43 16.17 0.00 0.86
1087 1103 6.126565 GGAAGTATAATCGGGGCCCTTTATAT 60.127 42.308 25.43 17.15 0.00 0.86
1088 1104 5.190330 GGAAGTATAATCGGGGCCCTTTATA 59.810 44.000 24.38 22.11 0.00 0.98
1089 1105 4.018688 GGAAGTATAATCGGGGCCCTTTAT 60.019 45.833 24.38 23.08 0.00 1.40
1090 1106 3.328637 GGAAGTATAATCGGGGCCCTTTA 59.671 47.826 24.38 18.09 0.00 1.85
1091 1107 2.107726 GGAAGTATAATCGGGGCCCTTT 59.892 50.000 24.38 16.42 0.00 3.11
1092 1108 1.703513 GGAAGTATAATCGGGGCCCTT 59.296 52.381 24.38 11.29 0.00 3.95
1093 1109 1.359168 GGAAGTATAATCGGGGCCCT 58.641 55.000 24.38 3.55 0.00 5.19
1094 1110 0.036671 CGGAAGTATAATCGGGGCCC 60.037 60.000 15.76 15.76 0.00 5.80
1095 1111 0.683412 ACGGAAGTATAATCGGGGCC 59.317 55.000 0.00 0.00 46.88 5.80
1113 1129 2.798445 AAATTTCAGGGGCCCGGGAC 62.798 60.000 29.31 25.86 0.00 4.46
1114 1130 2.508407 GAAATTTCAGGGGCCCGGGA 62.508 60.000 29.31 18.78 0.00 5.14
1115 1131 2.038813 AAATTTCAGGGGCCCGGG 59.961 61.111 23.09 19.09 0.00 5.73
1116 1132 1.304879 TGAAATTTCAGGGGCCCGG 60.305 57.895 18.95 18.23 32.50 5.73
1117 1133 4.432601 TGAAATTTCAGGGGCCCG 57.567 55.556 18.95 12.69 32.50 6.13
1125 1141 0.610785 GGGCCGGTCCTGAAATTTCA 60.611 55.000 20.78 19.45 35.57 2.69
1126 1142 0.323451 AGGGCCGGTCCTGAAATTTC 60.323 55.000 31.20 11.41 35.47 2.17
1127 1143 1.774300 AGGGCCGGTCCTGAAATTT 59.226 52.632 31.20 0.00 35.47 1.82
1128 1144 3.508048 AGGGCCGGTCCTGAAATT 58.492 55.556 31.20 0.00 35.47 1.82
1136 1152 4.157120 ATACGTGCAGGGCCGGTC 62.157 66.667 11.67 0.00 0.00 4.79
1137 1153 4.467084 CATACGTGCAGGGCCGGT 62.467 66.667 11.67 0.00 0.00 5.28
1161 1177 3.220674 TGATGTGATTGTGGGTGTTGA 57.779 42.857 0.00 0.00 0.00 3.18
1292 1308 4.003648 CCTTCTTGTTGTCGCTAATCCTT 58.996 43.478 0.00 0.00 0.00 3.36
1298 1314 2.413837 GAAGCCTTCTTGTTGTCGCTA 58.586 47.619 0.00 0.00 31.48 4.26
1306 1322 1.507141 CGTTGCCGAAGCCTTCTTGT 61.507 55.000 2.49 0.00 38.69 3.16
1355 1371 1.068434 CGCTCCTTCCTCATCTCTTCC 59.932 57.143 0.00 0.00 0.00 3.46
1363 1379 1.339055 CCATGAAACGCTCCTTCCTCA 60.339 52.381 0.00 0.00 0.00 3.86
1482 1501 0.904649 ATGACGGTCCAGCTTCATCA 59.095 50.000 5.55 0.00 0.00 3.07
1496 1515 3.541632 AGCAAAATACTACCCCATGACG 58.458 45.455 0.00 0.00 0.00 4.35
1550 1582 5.663556 AGGAAGGGGACTATTTCTTCTGTAG 59.336 44.000 0.00 0.00 42.68 2.74
1554 1586 5.313506 ACAAAGGAAGGGGACTATTTCTTCT 59.686 40.000 0.00 0.00 42.68 2.85
1559 1591 5.074746 ACAACAAAGGAAGGGGACTATTT 57.925 39.130 0.00 0.00 42.68 1.40
1561 1593 4.354087 AGAACAACAAAGGAAGGGGACTAT 59.646 41.667 0.00 0.00 42.68 2.12
1564 1596 2.623416 CAGAACAACAAAGGAAGGGGAC 59.377 50.000 0.00 0.00 0.00 4.46
1566 1598 2.666317 ACAGAACAACAAAGGAAGGGG 58.334 47.619 0.00 0.00 0.00 4.79
1633 1678 5.482006 GAATGAGCCCACAAGCTTTATTTT 58.518 37.500 0.00 0.00 45.15 1.82
1647 1692 1.134098 TCCTCCAAATCGAATGAGCCC 60.134 52.381 3.34 0.00 0.00 5.19
1648 1693 2.332063 TCCTCCAAATCGAATGAGCC 57.668 50.000 3.34 0.00 0.00 4.70
1649 1694 4.853268 GATTTCCTCCAAATCGAATGAGC 58.147 43.478 3.34 0.00 40.82 4.26
1658 1703 6.954232 TCCTACGTTTAGATTTCCTCCAAAT 58.046 36.000 0.00 0.00 37.41 2.32
1659 1704 6.363167 TCCTACGTTTAGATTTCCTCCAAA 57.637 37.500 0.00 0.00 0.00 3.28
1660 1705 6.363167 TTCCTACGTTTAGATTTCCTCCAA 57.637 37.500 0.00 0.00 0.00 3.53
1661 1706 6.555463 ATTCCTACGTTTAGATTTCCTCCA 57.445 37.500 0.00 0.00 0.00 3.86
1662 1707 7.551617 TCAAATTCCTACGTTTAGATTTCCTCC 59.448 37.037 0.00 0.00 0.00 4.30
1663 1708 8.488651 TCAAATTCCTACGTTTAGATTTCCTC 57.511 34.615 0.00 0.00 0.00 3.71
1664 1709 8.857694 TTCAAATTCCTACGTTTAGATTTCCT 57.142 30.769 0.00 0.00 0.00 3.36
1665 1710 8.727910 ACTTCAAATTCCTACGTTTAGATTTCC 58.272 33.333 0.00 0.00 0.00 3.13
1668 1713 9.939802 ACTACTTCAAATTCCTACGTTTAGATT 57.060 29.630 0.00 0.00 0.00 2.40
1692 1737 9.236006 GTGCCATCCTATCAAAATTCATATACT 57.764 33.333 0.00 0.00 0.00 2.12
1693 1738 9.236006 AGTGCCATCCTATCAAAATTCATATAC 57.764 33.333 0.00 0.00 0.00 1.47
1694 1739 9.812347 AAGTGCCATCCTATCAAAATTCATATA 57.188 29.630 0.00 0.00 0.00 0.86
1695 1740 8.582437 CAAGTGCCATCCTATCAAAATTCATAT 58.418 33.333 0.00 0.00 0.00 1.78
1696 1741 7.470424 GCAAGTGCCATCCTATCAAAATTCATA 60.470 37.037 0.00 0.00 34.31 2.15
1697 1742 6.684613 GCAAGTGCCATCCTATCAAAATTCAT 60.685 38.462 0.00 0.00 34.31 2.57
1698 1743 5.394443 GCAAGTGCCATCCTATCAAAATTCA 60.394 40.000 0.00 0.00 34.31 2.57
1699 1744 5.045872 GCAAGTGCCATCCTATCAAAATTC 58.954 41.667 0.00 0.00 34.31 2.17
1700 1745 5.014808 GCAAGTGCCATCCTATCAAAATT 57.985 39.130 0.00 0.00 34.31 1.82
1701 1746 4.660789 GCAAGTGCCATCCTATCAAAAT 57.339 40.909 0.00 0.00 34.31 1.82
1715 1760 2.185004 TTCCTTAGAGTGGCAAGTGC 57.815 50.000 0.00 0.00 41.14 4.40
1716 1761 4.154918 GTCAATTCCTTAGAGTGGCAAGTG 59.845 45.833 0.00 0.00 0.00 3.16
1717 1762 4.042187 AGTCAATTCCTTAGAGTGGCAAGT 59.958 41.667 0.00 0.00 0.00 3.16
1718 1763 4.583871 AGTCAATTCCTTAGAGTGGCAAG 58.416 43.478 0.00 0.00 0.00 4.01
1719 1764 4.640771 AGTCAATTCCTTAGAGTGGCAA 57.359 40.909 0.00 0.00 0.00 4.52
1720 1765 4.326826 CAAGTCAATTCCTTAGAGTGGCA 58.673 43.478 0.00 0.00 0.00 4.92
1721 1766 3.127721 GCAAGTCAATTCCTTAGAGTGGC 59.872 47.826 0.00 0.00 0.00 5.01
1722 1767 3.691609 GGCAAGTCAATTCCTTAGAGTGG 59.308 47.826 0.00 0.00 0.00 4.00
1723 1768 4.583871 AGGCAAGTCAATTCCTTAGAGTG 58.416 43.478 0.00 0.00 0.00 3.51
1724 1769 4.621747 CGAGGCAAGTCAATTCCTTAGAGT 60.622 45.833 0.00 0.00 0.00 3.24
1725 1770 3.868077 CGAGGCAAGTCAATTCCTTAGAG 59.132 47.826 0.00 0.00 0.00 2.43
1726 1771 3.260884 ACGAGGCAAGTCAATTCCTTAGA 59.739 43.478 0.00 0.00 0.00 2.10
1727 1772 3.600388 ACGAGGCAAGTCAATTCCTTAG 58.400 45.455 0.00 0.00 0.00 2.18
1728 1773 3.695830 ACGAGGCAAGTCAATTCCTTA 57.304 42.857 0.00 0.00 0.00 2.69
1729 1774 2.568623 ACGAGGCAAGTCAATTCCTT 57.431 45.000 0.00 0.00 0.00 3.36
1730 1775 2.427506 GAACGAGGCAAGTCAATTCCT 58.572 47.619 0.00 0.00 0.00 3.36
1731 1776 1.468914 GGAACGAGGCAAGTCAATTCC 59.531 52.381 0.00 0.00 0.00 3.01
1732 1777 2.427506 AGGAACGAGGCAAGTCAATTC 58.572 47.619 0.00 0.00 0.00 2.17
1733 1778 2.568623 AGGAACGAGGCAAGTCAATT 57.431 45.000 0.00 0.00 0.00 2.32
1734 1779 3.535561 CATAGGAACGAGGCAAGTCAAT 58.464 45.455 0.00 0.00 0.00 2.57
1735 1780 2.935238 GCATAGGAACGAGGCAAGTCAA 60.935 50.000 0.00 0.00 41.12 3.18
1736 1781 1.405526 GCATAGGAACGAGGCAAGTCA 60.406 52.381 0.00 0.00 41.12 3.41
1737 1782 1.291132 GCATAGGAACGAGGCAAGTC 58.709 55.000 0.00 0.00 41.12 3.01
1738 1783 0.460284 CGCATAGGAACGAGGCAAGT 60.460 55.000 0.00 0.00 41.63 3.16
1739 1784 1.766143 GCGCATAGGAACGAGGCAAG 61.766 60.000 0.30 0.00 41.63 4.01
1740 1785 1.813753 GCGCATAGGAACGAGGCAA 60.814 57.895 0.30 0.00 41.63 4.52
1741 1786 2.202878 GCGCATAGGAACGAGGCA 60.203 61.111 0.30 0.00 41.63 4.75
1742 1787 1.366111 TTTGCGCATAGGAACGAGGC 61.366 55.000 12.75 0.00 37.40 4.70
1743 1788 1.083489 TTTTGCGCATAGGAACGAGG 58.917 50.000 12.75 0.00 0.00 4.63
1744 1789 2.351418 TCATTTTGCGCATAGGAACGAG 59.649 45.455 12.75 0.00 0.00 4.18
1745 1790 2.351418 CTCATTTTGCGCATAGGAACGA 59.649 45.455 12.75 1.36 0.00 3.85
1746 1791 2.708514 CTCATTTTGCGCATAGGAACG 58.291 47.619 12.75 0.00 0.00 3.95
1747 1792 2.098117 AGCTCATTTTGCGCATAGGAAC 59.902 45.455 12.75 5.43 28.96 3.62
1748 1793 2.368439 AGCTCATTTTGCGCATAGGAA 58.632 42.857 12.75 0.00 28.96 3.36
1749 1794 2.042686 AGCTCATTTTGCGCATAGGA 57.957 45.000 12.75 9.16 28.96 2.94
1750 1795 2.855963 CAAAGCTCATTTTGCGCATAGG 59.144 45.455 12.75 4.39 31.96 2.57
1751 1796 3.761657 TCAAAGCTCATTTTGCGCATAG 58.238 40.909 12.75 5.38 37.83 2.23
1752 1797 3.191162 ACTCAAAGCTCATTTTGCGCATA 59.809 39.130 12.75 2.60 37.83 3.14
1753 1798 2.029649 ACTCAAAGCTCATTTTGCGCAT 60.030 40.909 12.75 0.00 37.83 4.73
1754 1799 1.337703 ACTCAAAGCTCATTTTGCGCA 59.662 42.857 5.66 5.66 37.83 6.09
1755 1800 1.717645 CACTCAAAGCTCATTTTGCGC 59.282 47.619 0.00 0.00 37.83 6.09
1756 1801 2.030893 TCCACTCAAAGCTCATTTTGCG 60.031 45.455 0.00 0.00 37.83 4.85
1757 1802 3.648339 TCCACTCAAAGCTCATTTTGC 57.352 42.857 0.00 0.00 37.83 3.68
1758 1803 5.130292 ACATCCACTCAAAGCTCATTTTG 57.870 39.130 0.00 0.00 38.97 2.44
1759 1804 7.831193 ACTATACATCCACTCAAAGCTCATTTT 59.169 33.333 0.00 0.00 0.00 1.82
1760 1805 7.341805 ACTATACATCCACTCAAAGCTCATTT 58.658 34.615 0.00 0.00 0.00 2.32
1761 1806 6.893583 ACTATACATCCACTCAAAGCTCATT 58.106 36.000 0.00 0.00 0.00 2.57
1762 1807 6.491714 ACTATACATCCACTCAAAGCTCAT 57.508 37.500 0.00 0.00 0.00 2.90
1763 1808 5.939764 ACTATACATCCACTCAAAGCTCA 57.060 39.130 0.00 0.00 0.00 4.26
1764 1809 7.119846 ACAAAACTATACATCCACTCAAAGCTC 59.880 37.037 0.00 0.00 0.00 4.09
1765 1810 6.942576 ACAAAACTATACATCCACTCAAAGCT 59.057 34.615 0.00 0.00 0.00 3.74
1766 1811 7.145932 ACAAAACTATACATCCACTCAAAGC 57.854 36.000 0.00 0.00 0.00 3.51
1767 1812 8.783093 TGAACAAAACTATACATCCACTCAAAG 58.217 33.333 0.00 0.00 0.00 2.77
1768 1813 8.684386 TGAACAAAACTATACATCCACTCAAA 57.316 30.769 0.00 0.00 0.00 2.69
1769 1814 8.684386 TTGAACAAAACTATACATCCACTCAA 57.316 30.769 0.00 0.00 0.00 3.02
1770 1815 8.684386 TTTGAACAAAACTATACATCCACTCA 57.316 30.769 0.00 0.00 0.00 3.41
1771 1816 9.612620 CTTTTGAACAAAACTATACATCCACTC 57.387 33.333 8.37 0.00 35.57 3.51
1772 1817 8.082242 GCTTTTGAACAAAACTATACATCCACT 58.918 33.333 8.37 0.00 35.57 4.00
1773 1818 7.865385 TGCTTTTGAACAAAACTATACATCCAC 59.135 33.333 8.37 0.00 35.57 4.02
1774 1819 7.946207 TGCTTTTGAACAAAACTATACATCCA 58.054 30.769 8.37 0.00 35.57 3.41
1775 1820 8.986477 ATGCTTTTGAACAAAACTATACATCC 57.014 30.769 8.37 0.00 35.57 3.51
1778 1823 9.290988 TCCTATGCTTTTGAACAAAACTATACA 57.709 29.630 8.37 4.00 35.57 2.29
1782 1827 9.474920 CATTTCCTATGCTTTTGAACAAAACTA 57.525 29.630 8.37 2.41 35.57 2.24
1783 1828 8.203485 TCATTTCCTATGCTTTTGAACAAAACT 58.797 29.630 8.37 1.14 35.57 2.66
1784 1829 8.364129 TCATTTCCTATGCTTTTGAACAAAAC 57.636 30.769 8.37 6.99 35.57 2.43
1785 1830 8.954950 TTCATTTCCTATGCTTTTGAACAAAA 57.045 26.923 11.35 11.35 37.90 2.44
1811 1856 8.023128 GCGTACAGGTATTTCGTAGGAATATTA 58.977 37.037 0.00 0.00 30.88 0.98
1812 1857 6.865205 GCGTACAGGTATTTCGTAGGAATATT 59.135 38.462 0.00 0.00 30.88 1.28
1813 1858 6.208204 AGCGTACAGGTATTTCGTAGGAATAT 59.792 38.462 0.00 0.00 30.88 1.28
1814 1859 5.532406 AGCGTACAGGTATTTCGTAGGAATA 59.468 40.000 0.00 0.00 30.88 1.75
1815 1860 4.340381 AGCGTACAGGTATTTCGTAGGAAT 59.660 41.667 0.00 0.00 30.88 3.01
1816 1861 3.696051 AGCGTACAGGTATTTCGTAGGAA 59.304 43.478 0.00 0.00 0.00 3.36
1817 1862 3.282021 AGCGTACAGGTATTTCGTAGGA 58.718 45.455 0.00 0.00 0.00 2.94
1818 1863 3.705043 AGCGTACAGGTATTTCGTAGG 57.295 47.619 0.00 0.00 0.00 3.18
1819 1864 4.501921 GGAAAGCGTACAGGTATTTCGTAG 59.498 45.833 0.00 0.00 32.03 3.51
1820 1865 4.158394 AGGAAAGCGTACAGGTATTTCGTA 59.842 41.667 0.00 0.00 32.03 3.43
1821 1866 3.056322 AGGAAAGCGTACAGGTATTTCGT 60.056 43.478 0.00 0.00 32.03 3.85
1822 1867 3.518590 AGGAAAGCGTACAGGTATTTCG 58.481 45.455 0.00 0.00 32.03 3.46
1823 1868 5.413499 TGTAGGAAAGCGTACAGGTATTTC 58.587 41.667 0.00 0.00 39.63 2.17
1824 1869 5.410355 TGTAGGAAAGCGTACAGGTATTT 57.590 39.130 0.00 0.00 39.63 1.40
1825 1870 5.410355 TTGTAGGAAAGCGTACAGGTATT 57.590 39.130 0.00 0.00 43.68 1.89
1826 1871 5.173664 GTTTGTAGGAAAGCGTACAGGTAT 58.826 41.667 0.00 0.00 43.68 2.73
1827 1872 4.559153 GTTTGTAGGAAAGCGTACAGGTA 58.441 43.478 0.00 0.00 43.68 3.08
1828 1873 3.396560 GTTTGTAGGAAAGCGTACAGGT 58.603 45.455 0.00 0.00 43.68 4.00
1829 1874 2.740447 GGTTTGTAGGAAAGCGTACAGG 59.260 50.000 0.00 0.00 43.68 4.00
1830 1875 2.410730 CGGTTTGTAGGAAAGCGTACAG 59.589 50.000 9.85 0.00 43.68 2.74
1831 1876 2.406130 CGGTTTGTAGGAAAGCGTACA 58.594 47.619 9.85 0.00 43.53 2.90
1836 1881 2.227865 TGCATTCGGTTTGTAGGAAAGC 59.772 45.455 0.00 0.00 35.59 3.51
1837 1882 4.701956 ATGCATTCGGTTTGTAGGAAAG 57.298 40.909 0.00 0.00 0.00 2.62
1838 1883 9.214957 CTATATATGCATTCGGTTTGTAGGAAA 57.785 33.333 3.54 0.00 0.00 3.13
1839 1884 7.822334 CCTATATATGCATTCGGTTTGTAGGAA 59.178 37.037 3.54 0.00 0.00 3.36
1840 1885 7.179516 TCCTATATATGCATTCGGTTTGTAGGA 59.820 37.037 3.54 8.50 32.65 2.94
1841 1886 7.327975 TCCTATATATGCATTCGGTTTGTAGG 58.672 38.462 3.54 6.40 0.00 3.18
1842 1887 8.771920 TTCCTATATATGCATTCGGTTTGTAG 57.228 34.615 3.54 0.00 0.00 2.74
1843 1888 9.733556 ATTTCCTATATATGCATTCGGTTTGTA 57.266 29.630 3.54 0.00 0.00 2.41
1844 1889 8.635765 ATTTCCTATATATGCATTCGGTTTGT 57.364 30.769 3.54 0.00 0.00 2.83
1845 1890 9.912634 AAATTTCCTATATATGCATTCGGTTTG 57.087 29.630 3.54 0.00 0.00 2.93
1848 1893 8.739972 GGAAAATTTCCTATATATGCATTCGGT 58.260 33.333 17.01 0.00 46.57 4.69
1865 1910 6.650807 GGAACAAGGATTCCAAGGAAAATTTC 59.349 38.462 5.52 0.00 46.49 2.17
1866 1911 6.533730 GGAACAAGGATTCCAAGGAAAATTT 58.466 36.000 5.52 0.00 46.49 1.82
1867 1912 6.114187 GGAACAAGGATTCCAAGGAAAATT 57.886 37.500 5.52 0.00 46.49 1.82
1868 1913 5.745312 GGAACAAGGATTCCAAGGAAAAT 57.255 39.130 5.52 0.00 46.49 1.82
1885 1930 9.936759 GATTTTTATAGGAAAAACATGGGAACA 57.063 29.630 0.00 0.00 37.07 3.18
1886 1931 9.378551 GGATTTTTATAGGAAAAACATGGGAAC 57.621 33.333 0.00 0.00 32.75 3.62
1887 1932 9.332713 AGGATTTTTATAGGAAAAACATGGGAA 57.667 29.630 0.00 0.00 32.75 3.97
1888 1933 8.909423 AGGATTTTTATAGGAAAAACATGGGA 57.091 30.769 0.00 0.00 32.75 4.37
1889 1934 8.204160 GGAGGATTTTTATAGGAAAAACATGGG 58.796 37.037 0.00 0.00 32.75 4.00
1890 1935 8.757877 TGGAGGATTTTTATAGGAAAAACATGG 58.242 33.333 0.00 0.00 32.75 3.66
1893 1938 9.990360 GTTTGGAGGATTTTTATAGGAAAAACA 57.010 29.630 0.00 0.00 32.75 2.83
1894 1939 9.431887 GGTTTGGAGGATTTTTATAGGAAAAAC 57.568 33.333 0.00 0.00 32.75 2.43
1895 1940 8.308207 CGGTTTGGAGGATTTTTATAGGAAAAA 58.692 33.333 0.00 0.00 32.75 1.94
1896 1941 7.670559 TCGGTTTGGAGGATTTTTATAGGAAAA 59.329 33.333 0.00 0.00 33.46 2.29
1897 1942 7.176490 TCGGTTTGGAGGATTTTTATAGGAAA 58.824 34.615 0.00 0.00 0.00 3.13
1898 1943 6.723339 TCGGTTTGGAGGATTTTTATAGGAA 58.277 36.000 0.00 0.00 0.00 3.36
1899 1944 6.316280 TCGGTTTGGAGGATTTTTATAGGA 57.684 37.500 0.00 0.00 0.00 2.94
1900 1945 7.284489 TCATTCGGTTTGGAGGATTTTTATAGG 59.716 37.037 0.00 0.00 0.00 2.57
1901 1946 8.220755 TCATTCGGTTTGGAGGATTTTTATAG 57.779 34.615 0.00 0.00 0.00 1.31
1902 1947 8.220755 CTCATTCGGTTTGGAGGATTTTTATA 57.779 34.615 0.00 0.00 0.00 0.98
1903 1948 7.100458 CTCATTCGGTTTGGAGGATTTTTAT 57.900 36.000 0.00 0.00 0.00 1.40
1904 1949 6.509418 CTCATTCGGTTTGGAGGATTTTTA 57.491 37.500 0.00 0.00 0.00 1.52
1905 1950 5.391312 CTCATTCGGTTTGGAGGATTTTT 57.609 39.130 0.00 0.00 0.00 1.94
1912 1957 1.402968 CATGCCTCATTCGGTTTGGAG 59.597 52.381 0.00 0.00 0.00 3.86
1913 1958 1.271871 ACATGCCTCATTCGGTTTGGA 60.272 47.619 0.00 0.00 0.00 3.53
1914 1959 1.135315 CACATGCCTCATTCGGTTTGG 60.135 52.381 0.00 0.00 0.00 3.28
1915 1960 1.541147 ACACATGCCTCATTCGGTTTG 59.459 47.619 0.00 0.00 0.00 2.93
1916 1961 1.541147 CACACATGCCTCATTCGGTTT 59.459 47.619 0.00 0.00 0.00 3.27
1917 1962 1.167851 CACACATGCCTCATTCGGTT 58.832 50.000 0.00 0.00 0.00 4.44
1918 1963 0.036732 ACACACATGCCTCATTCGGT 59.963 50.000 0.00 0.00 0.00 4.69
1919 1964 0.448990 CACACACATGCCTCATTCGG 59.551 55.000 0.00 0.00 0.00 4.30
1920 1965 1.129251 GACACACACATGCCTCATTCG 59.871 52.381 0.00 0.00 0.00 3.34
1921 1966 2.153645 TGACACACACATGCCTCATTC 58.846 47.619 0.00 0.00 0.00 2.67
1922 1967 2.275134 TGACACACACATGCCTCATT 57.725 45.000 0.00 0.00 0.00 2.57
1923 1968 2.089201 CATGACACACACATGCCTCAT 58.911 47.619 0.00 0.00 38.58 2.90
1924 1969 1.072015 TCATGACACACACATGCCTCA 59.928 47.619 0.00 0.00 43.03 3.86
1925 1970 1.812235 TCATGACACACACATGCCTC 58.188 50.000 0.00 0.00 43.03 4.70
1926 1971 2.502142 ATCATGACACACACATGCCT 57.498 45.000 0.00 0.00 43.03 4.75
1927 1972 4.700268 TTAATCATGACACACACATGCC 57.300 40.909 0.00 0.00 43.03 4.40
1928 1973 7.970061 ACTAAATTAATCATGACACACACATGC 59.030 33.333 0.00 0.00 43.03 4.06
1958 2003 2.939261 CGTGTGGGCCCGAGTACTT 61.939 63.158 19.37 0.00 0.00 2.24
1976 2021 5.062308 GTGATTCATCTACGAAACACAGGTC 59.938 44.000 8.60 0.00 43.99 3.85
1987 2033 1.545759 ACGCACGTGATTCATCTACG 58.454 50.000 22.23 12.23 42.98 3.51
2005 2054 3.485216 CGGACGGATTGCATTTCAGTTAC 60.485 47.826 4.84 2.11 0.00 2.50
2134 2336 3.890756 TCTGTCAAAAACTGCATGTGGAT 59.109 39.130 0.00 0.00 0.00 3.41
2390 2915 9.810870 TTATGGTTTAGGGTTTAGAGCTTTAAA 57.189 29.630 5.38 5.38 0.00 1.52
2522 3084 2.223180 GGTTGTTGCGACGAGAACTTTT 60.223 45.455 0.00 0.00 0.00 2.27
2528 3090 0.030504 TTACGGTTGTTGCGACGAGA 59.969 50.000 0.00 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.