Multiple sequence alignment - TraesCS5B01G056100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G056100 chr5B 100.000 3629 0 0 1 3629 62034552 62030924 0.000000e+00 6702.0
1 TraesCS5B01G056100 chr5B 95.901 2464 82 6 851 3300 63532957 63535415 0.000000e+00 3973.0
2 TraesCS5B01G056100 chr5B 93.808 323 9 7 3299 3621 63535992 63536303 3.280000e-130 475.0
3 TraesCS5B01G056100 chr5D 95.680 2778 100 11 859 3629 58496617 58499381 0.000000e+00 4447.0
4 TraesCS5B01G056100 chr5D 89.474 228 20 3 1 224 434687245 434687472 5.930000e-73 285.0
5 TraesCS5B01G056100 chr5D 92.157 51 4 0 3110 3160 485938214 485938164 5.030000e-09 73.1
6 TraesCS5B01G056100 chr5A 96.249 2453 83 7 851 3300 46703885 46706331 0.000000e+00 4012.0
7 TraesCS5B01G056100 chr5A 95.142 247 4 4 3383 3629 46707090 46707328 2.040000e-102 383.0
8 TraesCS5B01G056100 chr5A 96.591 88 1 1 3299 3384 46706921 46707008 1.050000e-30 145.0
9 TraesCS5B01G056100 chr5A 89.796 49 5 0 3103 3151 365923354 365923402 3.030000e-06 63.9
10 TraesCS5B01G056100 chr2D 90.625 224 20 1 2 224 498460570 498460793 2.740000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G056100 chr5B 62030924 62034552 3628 True 6702.000000 6702 100.0000 1 3629 1 chr5B.!!$R1 3628
1 TraesCS5B01G056100 chr5B 63532957 63536303 3346 False 2224.000000 3973 94.8545 851 3621 2 chr5B.!!$F1 2770
2 TraesCS5B01G056100 chr5D 58496617 58499381 2764 False 4447.000000 4447 95.6800 859 3629 1 chr5D.!!$F1 2770
3 TraesCS5B01G056100 chr5A 46703885 46707328 3443 False 1513.333333 4012 95.9940 851 3629 3 chr5A.!!$F2 2778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
772 773 0.032615 TTGGGCTTGTGTGGGACTTT 60.033 50.0 0.0 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2716 2736 0.189574 TCCCAAAGGGCAATCAACCA 59.81 50.0 0.0 0.0 43.94 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.798682 GCCGGGGGAGGGAAGAGA 62.799 72.222 2.18 0.00 0.00 3.10
27 28 2.287251 CCGGGGGAGGGAAGAGAT 59.713 66.667 0.00 0.00 0.00 2.75
28 29 1.839296 CCGGGGGAGGGAAGAGATC 60.839 68.421 0.00 0.00 0.00 2.75
40 41 4.292178 GAGATCCGCTCGGCCCAG 62.292 72.222 2.96 0.00 33.17 4.45
62 63 3.961414 GGCCGACCCAACCAAGGA 61.961 66.667 0.00 0.00 0.00 3.36
63 64 2.114411 GCCGACCCAACCAAGGAA 59.886 61.111 0.00 0.00 0.00 3.36
64 65 1.971695 GCCGACCCAACCAAGGAAG 60.972 63.158 0.00 0.00 0.00 3.46
65 66 1.303317 CCGACCCAACCAAGGAAGG 60.303 63.158 0.00 0.00 0.00 3.46
66 67 1.971695 CGACCCAACCAAGGAAGGC 60.972 63.158 0.00 0.00 0.00 4.35
67 68 1.606601 GACCCAACCAAGGAAGGCC 60.607 63.158 0.00 0.00 0.00 5.19
68 69 2.366153 GACCCAACCAAGGAAGGCCA 62.366 60.000 5.01 0.00 36.29 5.36
69 70 1.607467 CCCAACCAAGGAAGGCCAG 60.607 63.158 5.01 0.00 36.29 4.85
70 71 1.153756 CCAACCAAGGAAGGCCAGT 59.846 57.895 5.01 0.00 36.29 4.00
71 72 1.181098 CCAACCAAGGAAGGCCAGTG 61.181 60.000 5.01 0.00 36.29 3.66
72 73 0.178992 CAACCAAGGAAGGCCAGTGA 60.179 55.000 5.01 0.00 36.29 3.41
73 74 0.111253 AACCAAGGAAGGCCAGTGAG 59.889 55.000 5.01 0.00 36.29 3.51
74 75 0.768221 ACCAAGGAAGGCCAGTGAGA 60.768 55.000 5.01 0.00 36.29 3.27
75 76 0.035630 CCAAGGAAGGCCAGTGAGAG 60.036 60.000 5.01 0.00 36.29 3.20
76 77 0.035630 CAAGGAAGGCCAGTGAGAGG 60.036 60.000 5.01 0.00 36.29 3.69
77 78 1.204113 AAGGAAGGCCAGTGAGAGGG 61.204 60.000 5.01 0.00 36.29 4.30
78 79 2.674220 GGAAGGCCAGTGAGAGGGG 61.674 68.421 5.01 0.00 0.00 4.79
79 80 1.613630 GAAGGCCAGTGAGAGGGGA 60.614 63.158 5.01 0.00 0.00 4.81
80 81 1.614824 AAGGCCAGTGAGAGGGGAG 60.615 63.158 5.01 0.00 0.00 4.30
81 82 3.086600 GGCCAGTGAGAGGGGAGG 61.087 72.222 0.00 0.00 0.00 4.30
82 83 2.039624 GCCAGTGAGAGGGGAGGA 59.960 66.667 0.00 0.00 0.00 3.71
83 84 2.063378 GCCAGTGAGAGGGGAGGAG 61.063 68.421 0.00 0.00 0.00 3.69
84 85 2.063378 CCAGTGAGAGGGGAGGAGC 61.063 68.421 0.00 0.00 0.00 4.70
85 86 2.043450 AGTGAGAGGGGAGGAGCG 60.043 66.667 0.00 0.00 0.00 5.03
86 87 3.844090 GTGAGAGGGGAGGAGCGC 61.844 72.222 0.00 0.00 0.00 5.92
108 109 4.612412 GACACGGCCGACCCACAA 62.612 66.667 35.90 0.00 0.00 3.33
109 110 4.619227 ACACGGCCGACCCACAAG 62.619 66.667 35.90 12.55 0.00 3.16
116 117 4.263572 CGACCCACAAGGCCCACA 62.264 66.667 0.00 0.00 40.58 4.17
117 118 2.440599 GACCCACAAGGCCCACAT 59.559 61.111 0.00 0.00 40.58 3.21
118 119 1.678970 GACCCACAAGGCCCACATC 60.679 63.158 0.00 0.00 40.58 3.06
119 120 2.424842 GACCCACAAGGCCCACATCA 62.425 60.000 0.00 0.00 40.58 3.07
120 121 1.679977 CCCACAAGGCCCACATCAG 60.680 63.158 0.00 0.00 0.00 2.90
121 122 2.345760 CCACAAGGCCCACATCAGC 61.346 63.158 0.00 0.00 0.00 4.26
128 129 4.828296 CCCACATCAGCCCAGCCC 62.828 72.222 0.00 0.00 0.00 5.19
129 130 4.051167 CCACATCAGCCCAGCCCA 62.051 66.667 0.00 0.00 0.00 5.36
130 131 2.753043 CACATCAGCCCAGCCCAC 60.753 66.667 0.00 0.00 0.00 4.61
131 132 4.052518 ACATCAGCCCAGCCCACC 62.053 66.667 0.00 0.00 0.00 4.61
132 133 4.051167 CATCAGCCCAGCCCACCA 62.051 66.667 0.00 0.00 0.00 4.17
133 134 4.052518 ATCAGCCCAGCCCACCAC 62.053 66.667 0.00 0.00 0.00 4.16
161 162 2.534533 GTGGGGGAGGGAAGGGTT 60.535 66.667 0.00 0.00 0.00 4.11
162 163 2.167729 GTGGGGGAGGGAAGGGTTT 61.168 63.158 0.00 0.00 0.00 3.27
163 164 1.855451 TGGGGGAGGGAAGGGTTTC 60.855 63.158 0.00 0.00 0.00 2.78
231 232 2.356553 CGACCGGCCGTTTCAGAA 60.357 61.111 26.12 0.00 0.00 3.02
232 233 1.740296 CGACCGGCCGTTTCAGAAT 60.740 57.895 26.12 0.00 0.00 2.40
233 234 1.296056 CGACCGGCCGTTTCAGAATT 61.296 55.000 26.12 0.00 0.00 2.17
234 235 0.879090 GACCGGCCGTTTCAGAATTT 59.121 50.000 26.12 0.00 0.00 1.82
235 236 0.879090 ACCGGCCGTTTCAGAATTTC 59.121 50.000 26.12 0.00 0.00 2.17
236 237 0.878416 CCGGCCGTTTCAGAATTTCA 59.122 50.000 26.12 0.00 0.00 2.69
237 238 1.268352 CCGGCCGTTTCAGAATTTCAA 59.732 47.619 26.12 0.00 0.00 2.69
238 239 2.315901 CGGCCGTTTCAGAATTTCAAC 58.684 47.619 19.50 0.00 0.00 3.18
239 240 2.287308 CGGCCGTTTCAGAATTTCAACA 60.287 45.455 19.50 0.00 0.00 3.33
240 241 3.611530 CGGCCGTTTCAGAATTTCAACAT 60.612 43.478 19.50 0.00 0.00 2.71
241 242 3.674753 GGCCGTTTCAGAATTTCAACATG 59.325 43.478 0.00 0.00 0.00 3.21
242 243 4.545610 GCCGTTTCAGAATTTCAACATGA 58.454 39.130 0.00 0.00 0.00 3.07
243 244 5.163513 GCCGTTTCAGAATTTCAACATGAT 58.836 37.500 0.00 0.00 0.00 2.45
244 245 5.287035 GCCGTTTCAGAATTTCAACATGATC 59.713 40.000 0.00 0.00 0.00 2.92
245 246 6.380995 CCGTTTCAGAATTTCAACATGATCA 58.619 36.000 0.00 0.00 0.00 2.92
246 247 6.862608 CCGTTTCAGAATTTCAACATGATCAA 59.137 34.615 0.00 0.00 0.00 2.57
247 248 7.543172 CCGTTTCAGAATTTCAACATGATCAAT 59.457 33.333 0.00 0.00 0.00 2.57
248 249 8.581263 CGTTTCAGAATTTCAACATGATCAATC 58.419 33.333 0.00 0.00 0.00 2.67
249 250 9.414295 GTTTCAGAATTTCAACATGATCAATCA 57.586 29.630 0.00 0.00 41.70 2.57
250 251 9.984190 TTTCAGAATTTCAACATGATCAATCAA 57.016 25.926 0.00 0.00 40.69 2.57
251 252 9.634163 TTCAGAATTTCAACATGATCAATCAAG 57.366 29.630 0.00 0.00 40.69 3.02
252 253 8.799367 TCAGAATTTCAACATGATCAATCAAGT 58.201 29.630 0.00 0.00 40.08 3.16
253 254 9.419297 CAGAATTTCAACATGATCAATCAAGTT 57.581 29.630 0.00 7.57 46.03 2.66
254 255 9.991906 AGAATTTCAACATGATCAATCAAGTTT 57.008 25.926 10.08 0.00 43.64 2.66
256 257 9.550406 AATTTCAACATGATCAATCAAGTTTGT 57.450 25.926 10.08 1.93 43.64 2.83
257 258 8.578308 TTTCAACATGATCAATCAAGTTTGTC 57.422 30.769 10.08 0.00 43.64 3.18
258 259 6.680810 TCAACATGATCAATCAAGTTTGTCC 58.319 36.000 10.08 0.00 43.64 4.02
259 260 6.264970 TCAACATGATCAATCAAGTTTGTCCA 59.735 34.615 10.08 0.00 43.64 4.02
260 261 6.017400 ACATGATCAATCAAGTTTGTCCAC 57.983 37.500 0.00 0.00 40.69 4.02
261 262 5.771666 ACATGATCAATCAAGTTTGTCCACT 59.228 36.000 0.00 0.00 40.69 4.00
262 263 5.947228 TGATCAATCAAGTTTGTCCACTC 57.053 39.130 0.00 0.00 33.08 3.51
263 264 5.624159 TGATCAATCAAGTTTGTCCACTCT 58.376 37.500 0.00 0.00 33.08 3.24
264 265 6.768483 TGATCAATCAAGTTTGTCCACTCTA 58.232 36.000 0.00 0.00 33.08 2.43
265 266 6.875726 TGATCAATCAAGTTTGTCCACTCTAG 59.124 38.462 0.00 0.00 33.08 2.43
266 267 5.551233 TCAATCAAGTTTGTCCACTCTAGG 58.449 41.667 0.00 0.00 0.00 3.02
267 268 4.559862 ATCAAGTTTGTCCACTCTAGGG 57.440 45.455 0.00 0.00 0.00 3.53
268 269 3.314693 TCAAGTTTGTCCACTCTAGGGT 58.685 45.455 0.00 0.00 0.00 4.34
269 270 3.071023 TCAAGTTTGTCCACTCTAGGGTG 59.929 47.826 16.36 16.36 37.00 4.61
270 271 2.690840 AGTTTGTCCACTCTAGGGTGT 58.309 47.619 21.26 0.00 35.63 4.16
271 272 3.046374 AGTTTGTCCACTCTAGGGTGTT 58.954 45.455 21.26 0.00 35.63 3.32
272 273 3.458487 AGTTTGTCCACTCTAGGGTGTTT 59.542 43.478 21.26 0.00 35.63 2.83
273 274 3.485463 TTGTCCACTCTAGGGTGTTTG 57.515 47.619 21.26 6.58 35.63 2.93
274 275 2.684943 TGTCCACTCTAGGGTGTTTGA 58.315 47.619 21.26 8.92 35.63 2.69
275 276 3.042682 TGTCCACTCTAGGGTGTTTGAA 58.957 45.455 21.26 0.00 35.63 2.69
276 277 3.456644 TGTCCACTCTAGGGTGTTTGAAA 59.543 43.478 21.26 4.22 35.63 2.69
277 278 4.104102 TGTCCACTCTAGGGTGTTTGAAAT 59.896 41.667 21.26 0.00 35.63 2.17
278 279 5.308497 TGTCCACTCTAGGGTGTTTGAAATA 59.692 40.000 21.26 0.26 35.63 1.40
279 280 5.642491 GTCCACTCTAGGGTGTTTGAAATAC 59.358 44.000 21.26 0.00 35.63 1.89
280 281 4.941873 CCACTCTAGGGTGTTTGAAATACC 59.058 45.833 21.26 14.58 41.50 2.73
281 282 5.514136 CCACTCTAGGGTGTTTGAAATACCA 60.514 44.000 22.52 5.16 43.76 3.25
282 283 6.001460 CACTCTAGGGTGTTTGAAATACCAA 58.999 40.000 22.52 10.95 43.76 3.67
283 284 6.488683 CACTCTAGGGTGTTTGAAATACCAAA 59.511 38.462 22.52 10.64 43.76 3.28
284 285 6.715264 ACTCTAGGGTGTTTGAAATACCAAAG 59.285 38.462 22.52 18.03 43.76 2.77
285 286 4.600692 AGGGTGTTTGAAATACCAAAGC 57.399 40.909 22.52 7.72 43.76 3.51
286 287 3.964031 AGGGTGTTTGAAATACCAAAGCA 59.036 39.130 22.52 0.72 43.76 3.91
287 288 4.592778 AGGGTGTTTGAAATACCAAAGCAT 59.407 37.500 22.52 1.77 43.76 3.79
288 289 5.071653 AGGGTGTTTGAAATACCAAAGCATT 59.928 36.000 22.52 0.05 43.76 3.56
289 290 5.179182 GGGTGTTTGAAATACCAAAGCATTG 59.821 40.000 22.52 0.00 43.76 2.82
290 291 5.757808 GGTGTTTGAAATACCAAAGCATTGT 59.242 36.000 17.48 0.00 41.80 2.71
291 292 6.259829 GGTGTTTGAAATACCAAAGCATTGTT 59.740 34.615 17.48 0.00 41.80 2.83
292 293 7.201688 GGTGTTTGAAATACCAAAGCATTGTTT 60.202 33.333 17.48 0.00 41.80 2.83
293 294 8.180920 GTGTTTGAAATACCAAAGCATTGTTTT 58.819 29.630 0.43 0.00 36.78 2.43
294 295 8.734386 TGTTTGAAATACCAAAGCATTGTTTTT 58.266 25.926 0.43 0.00 36.78 1.94
321 322 8.851541 ATGTGAATGTTTCCAATTAAATTGCT 57.148 26.923 0.00 0.00 38.92 3.91
322 323 9.941325 ATGTGAATGTTTCCAATTAAATTGCTA 57.059 25.926 0.00 0.00 38.92 3.49
323 324 9.770097 TGTGAATGTTTCCAATTAAATTGCTAA 57.230 25.926 0.00 0.00 38.92 3.09
328 329 8.093659 TGTTTCCAATTAAATTGCTAAAAGGC 57.906 30.769 0.00 0.00 38.92 4.35
329 330 7.936301 TGTTTCCAATTAAATTGCTAAAAGGCT 59.064 29.630 0.00 0.00 38.92 4.58
330 331 7.903995 TTCCAATTAAATTGCTAAAAGGCTG 57.096 32.000 0.00 0.00 38.92 4.85
331 332 7.238486 TCCAATTAAATTGCTAAAAGGCTGA 57.762 32.000 0.00 0.00 38.92 4.26
332 333 7.850193 TCCAATTAAATTGCTAAAAGGCTGAT 58.150 30.769 0.00 0.00 38.92 2.90
333 334 8.320617 TCCAATTAAATTGCTAAAAGGCTGATT 58.679 29.630 0.00 0.00 38.92 2.57
334 335 8.949177 CCAATTAAATTGCTAAAAGGCTGATTT 58.051 29.630 0.00 0.00 38.92 2.17
337 338 9.723601 ATTAAATTGCTAAAAGGCTGATTTTGA 57.276 25.926 0.00 0.00 34.35 2.69
338 339 9.553064 TTAAATTGCTAAAAGGCTGATTTTGAA 57.447 25.926 0.00 0.00 34.35 2.69
339 340 8.449251 AAATTGCTAAAAGGCTGATTTTGAAA 57.551 26.923 0.00 0.00 34.35 2.69
340 341 8.625786 AATTGCTAAAAGGCTGATTTTGAAAT 57.374 26.923 0.00 0.00 34.35 2.17
341 342 7.424227 TTGCTAAAAGGCTGATTTTGAAATG 57.576 32.000 0.00 0.00 34.35 2.32
342 343 5.933463 TGCTAAAAGGCTGATTTTGAAATGG 59.067 36.000 0.00 0.00 34.35 3.16
343 344 6.165577 GCTAAAAGGCTGATTTTGAAATGGA 58.834 36.000 0.00 0.00 34.35 3.41
344 345 6.820152 GCTAAAAGGCTGATTTTGAAATGGAT 59.180 34.615 0.00 0.00 34.35 3.41
345 346 7.335171 GCTAAAAGGCTGATTTTGAAATGGATT 59.665 33.333 0.00 0.00 34.35 3.01
346 347 9.874205 CTAAAAGGCTGATTTTGAAATGGATTA 57.126 29.630 0.00 0.00 34.35 1.75
348 349 9.571816 AAAAGGCTGATTTTGAAATGGATTAAA 57.428 25.926 0.00 0.00 31.30 1.52
349 350 9.571816 AAAGGCTGATTTTGAAATGGATTAAAA 57.428 25.926 0.00 0.00 0.00 1.52
350 351 9.571816 AAGGCTGATTTTGAAATGGATTAAAAA 57.428 25.926 0.00 0.00 0.00 1.94
377 378 7.995463 TCCTTAAATATTTGTTTTATGGCGC 57.005 32.000 11.05 0.00 35.43 6.53
378 379 7.548097 TCCTTAAATATTTGTTTTATGGCGCA 58.452 30.769 10.83 0.00 35.43 6.09
379 380 7.489757 TCCTTAAATATTTGTTTTATGGCGCAC 59.510 33.333 10.83 0.00 35.43 5.34
380 381 7.254286 CCTTAAATATTTGTTTTATGGCGCACC 60.254 37.037 10.83 0.00 31.27 5.01
381 382 5.337578 AATATTTGTTTTATGGCGCACCT 57.662 34.783 10.83 0.00 36.63 4.00
382 383 3.676291 ATTTGTTTTATGGCGCACCTT 57.324 38.095 10.83 0.00 36.63 3.50
383 384 2.430546 TTGTTTTATGGCGCACCTTG 57.569 45.000 10.83 0.00 36.63 3.61
384 385 0.038709 TGTTTTATGGCGCACCTTGC 60.039 50.000 10.83 0.00 40.69 4.01
391 392 2.180017 GCGCACCTTGCCTTCATG 59.820 61.111 0.30 0.00 41.12 3.07
392 393 2.879907 CGCACCTTGCCTTCATGG 59.120 61.111 0.00 0.00 41.12 3.66
394 395 1.526575 CGCACCTTGCCTTCATGGTT 61.527 55.000 0.00 0.00 45.30 3.67
395 396 1.544724 GCACCTTGCCTTCATGGTTA 58.455 50.000 0.00 0.00 45.30 2.85
396 397 1.202348 GCACCTTGCCTTCATGGTTAC 59.798 52.381 0.00 0.00 45.30 2.50
397 398 2.513753 CACCTTGCCTTCATGGTTACA 58.486 47.619 0.00 0.00 45.30 2.41
398 399 2.489329 CACCTTGCCTTCATGGTTACAG 59.511 50.000 0.00 0.00 45.30 2.74
399 400 2.108250 ACCTTGCCTTCATGGTTACAGT 59.892 45.455 0.00 0.00 45.30 3.55
400 401 2.489329 CCTTGCCTTCATGGTTACAGTG 59.511 50.000 0.00 0.00 38.35 3.66
401 402 2.198827 TGCCTTCATGGTTACAGTGG 57.801 50.000 0.00 0.00 38.35 4.00
402 403 1.423541 TGCCTTCATGGTTACAGTGGT 59.576 47.619 0.00 0.00 38.35 4.16
403 404 1.812571 GCCTTCATGGTTACAGTGGTG 59.187 52.381 0.00 0.00 38.35 4.17
404 405 2.552155 GCCTTCATGGTTACAGTGGTGA 60.552 50.000 0.00 0.00 38.35 4.02
405 406 3.074412 CCTTCATGGTTACAGTGGTGAC 58.926 50.000 0.00 0.00 33.05 3.67
406 407 3.244561 CCTTCATGGTTACAGTGGTGACT 60.245 47.826 0.00 0.00 34.21 3.41
407 408 4.389374 CTTCATGGTTACAGTGGTGACTT 58.611 43.478 0.00 0.00 34.21 3.01
408 409 4.431416 TCATGGTTACAGTGGTGACTTT 57.569 40.909 0.00 0.00 34.21 2.66
409 410 4.787551 TCATGGTTACAGTGGTGACTTTT 58.212 39.130 0.00 0.00 34.21 2.27
410 411 5.931294 TCATGGTTACAGTGGTGACTTTTA 58.069 37.500 0.00 0.00 34.21 1.52
411 412 6.539173 TCATGGTTACAGTGGTGACTTTTAT 58.461 36.000 0.00 0.00 34.21 1.40
412 413 6.653320 TCATGGTTACAGTGGTGACTTTTATC 59.347 38.462 0.00 0.00 34.21 1.75
413 414 4.992319 TGGTTACAGTGGTGACTTTTATCG 59.008 41.667 0.00 0.00 34.21 2.92
414 415 5.221481 TGGTTACAGTGGTGACTTTTATCGA 60.221 40.000 0.00 0.00 34.21 3.59
415 416 5.697633 GGTTACAGTGGTGACTTTTATCGAA 59.302 40.000 0.00 0.00 34.21 3.71
416 417 6.370718 GGTTACAGTGGTGACTTTTATCGAAT 59.629 38.462 0.00 0.00 34.21 3.34
417 418 7.094933 GGTTACAGTGGTGACTTTTATCGAATT 60.095 37.037 0.00 0.00 34.21 2.17
418 419 6.877611 ACAGTGGTGACTTTTATCGAATTT 57.122 33.333 0.00 0.00 0.00 1.82
419 420 7.272037 ACAGTGGTGACTTTTATCGAATTTT 57.728 32.000 0.00 0.00 0.00 1.82
420 421 8.385898 ACAGTGGTGACTTTTATCGAATTTTA 57.614 30.769 0.00 0.00 0.00 1.52
421 422 8.842280 ACAGTGGTGACTTTTATCGAATTTTAA 58.158 29.630 0.00 0.00 0.00 1.52
422 423 9.113876 CAGTGGTGACTTTTATCGAATTTTAAC 57.886 33.333 0.00 0.00 0.00 2.01
423 424 9.063615 AGTGGTGACTTTTATCGAATTTTAACT 57.936 29.630 0.00 0.00 0.00 2.24
424 425 9.326339 GTGGTGACTTTTATCGAATTTTAACTC 57.674 33.333 0.00 0.00 0.00 3.01
425 426 8.508875 TGGTGACTTTTATCGAATTTTAACTCC 58.491 33.333 0.00 0.00 0.00 3.85
426 427 8.508875 GGTGACTTTTATCGAATTTTAACTCCA 58.491 33.333 0.00 0.00 0.00 3.86
427 428 9.887406 GTGACTTTTATCGAATTTTAACTCCAA 57.113 29.630 0.00 0.00 0.00 3.53
428 429 9.887406 TGACTTTTATCGAATTTTAACTCCAAC 57.113 29.630 0.00 0.00 0.00 3.77
429 430 9.887406 GACTTTTATCGAATTTTAACTCCAACA 57.113 29.630 0.00 0.00 0.00 3.33
437 438 9.997482 TCGAATTTTAACTCCAACATATTAAGC 57.003 29.630 0.00 0.00 0.00 3.09
443 444 8.856153 TTAACTCCAACATATTAAGCTTGTCA 57.144 30.769 9.86 0.00 0.00 3.58
444 445 7.759489 AACTCCAACATATTAAGCTTGTCAA 57.241 32.000 9.86 0.00 0.00 3.18
445 446 7.759489 ACTCCAACATATTAAGCTTGTCAAA 57.241 32.000 9.86 0.00 0.00 2.69
446 447 8.177119 ACTCCAACATATTAAGCTTGTCAAAA 57.823 30.769 9.86 0.00 0.00 2.44
447 448 8.637986 ACTCCAACATATTAAGCTTGTCAAAAA 58.362 29.630 9.86 0.00 0.00 1.94
448 449 9.643693 CTCCAACATATTAAGCTTGTCAAAAAT 57.356 29.630 9.86 2.01 0.00 1.82
449 450 9.995003 TCCAACATATTAAGCTTGTCAAAAATT 57.005 25.926 9.86 0.00 0.00 1.82
462 463 9.914923 GCTTGTCAAAAATTTAGTTTGTTAAGG 57.085 29.630 14.48 2.98 37.28 2.69
476 477 8.934023 AGTTTGTTAAGGTATCAAGATCCAAA 57.066 30.769 0.00 0.00 0.00 3.28
477 478 9.533831 AGTTTGTTAAGGTATCAAGATCCAAAT 57.466 29.630 0.00 0.00 0.00 2.32
485 486 9.713684 AAGGTATCAAGATCCAAATAAAATCCA 57.286 29.630 0.00 0.00 0.00 3.41
486 487 9.136323 AGGTATCAAGATCCAAATAAAATCCAC 57.864 33.333 0.00 0.00 0.00 4.02
487 488 8.912988 GGTATCAAGATCCAAATAAAATCCACA 58.087 33.333 0.00 0.00 0.00 4.17
490 491 8.648698 TCAAGATCCAAATAAAATCCACAAGA 57.351 30.769 0.00 0.00 0.00 3.02
491 492 9.258629 TCAAGATCCAAATAAAATCCACAAGAT 57.741 29.630 0.00 0.00 36.48 2.40
492 493 9.309516 CAAGATCCAAATAAAATCCACAAGATG 57.690 33.333 0.00 0.00 34.56 2.90
493 494 8.599624 AGATCCAAATAAAATCCACAAGATGT 57.400 30.769 0.00 0.00 34.56 3.06
522 523 9.780186 ATAAAGATTATGCTTTACAGTACTCCC 57.220 33.333 0.00 0.00 41.58 4.30
523 524 6.808321 AGATTATGCTTTACAGTACTCCCA 57.192 37.500 0.00 0.00 0.00 4.37
524 525 7.195374 AGATTATGCTTTACAGTACTCCCAA 57.805 36.000 0.00 0.00 0.00 4.12
525 526 7.806180 AGATTATGCTTTACAGTACTCCCAAT 58.194 34.615 0.00 0.00 0.00 3.16
526 527 8.275040 AGATTATGCTTTACAGTACTCCCAATT 58.725 33.333 0.00 0.00 0.00 2.32
527 528 8.823220 ATTATGCTTTACAGTACTCCCAATTT 57.177 30.769 0.00 0.00 0.00 1.82
528 529 8.644374 TTATGCTTTACAGTACTCCCAATTTT 57.356 30.769 0.00 0.00 0.00 1.82
529 530 6.969993 TGCTTTACAGTACTCCCAATTTTT 57.030 33.333 0.00 0.00 0.00 1.94
530 531 8.644374 ATGCTTTACAGTACTCCCAATTTTTA 57.356 30.769 0.00 0.00 0.00 1.52
531 532 8.466617 TGCTTTACAGTACTCCCAATTTTTAA 57.533 30.769 0.00 0.00 0.00 1.52
532 533 9.084533 TGCTTTACAGTACTCCCAATTTTTAAT 57.915 29.630 0.00 0.00 0.00 1.40
533 534 9.569167 GCTTTACAGTACTCCCAATTTTTAATC 57.431 33.333 0.00 0.00 0.00 1.75
537 538 8.934023 ACAGTACTCCCAATTTTTAATCTTGA 57.066 30.769 0.00 0.00 0.00 3.02
538 539 9.014297 ACAGTACTCCCAATTTTTAATCTTGAG 57.986 33.333 0.00 0.00 0.00 3.02
539 540 9.014297 CAGTACTCCCAATTTTTAATCTTGAGT 57.986 33.333 0.00 0.00 35.05 3.41
558 559 9.508642 TCTTGAGTATACATAGTGATAGTCAGG 57.491 37.037 5.50 0.00 38.56 3.86
559 560 8.637196 TTGAGTATACATAGTGATAGTCAGGG 57.363 38.462 5.50 0.00 38.56 4.45
560 561 6.659668 TGAGTATACATAGTGATAGTCAGGGC 59.340 42.308 5.50 0.00 34.51 5.19
561 562 6.552932 AGTATACATAGTGATAGTCAGGGCA 58.447 40.000 5.50 0.00 0.00 5.36
562 563 7.185565 AGTATACATAGTGATAGTCAGGGCAT 58.814 38.462 5.50 0.00 0.00 4.40
563 564 4.881019 ACATAGTGATAGTCAGGGCATC 57.119 45.455 0.00 0.00 0.00 3.91
564 565 4.226384 ACATAGTGATAGTCAGGGCATCA 58.774 43.478 0.00 0.00 0.00 3.07
565 566 4.655649 ACATAGTGATAGTCAGGGCATCAA 59.344 41.667 0.00 0.00 30.85 2.57
566 567 3.834489 AGTGATAGTCAGGGCATCAAG 57.166 47.619 0.00 0.00 30.85 3.02
567 568 3.378512 AGTGATAGTCAGGGCATCAAGA 58.621 45.455 0.00 0.00 30.85 3.02
568 569 3.972638 AGTGATAGTCAGGGCATCAAGAT 59.027 43.478 0.00 0.00 30.85 2.40
569 570 5.150715 AGTGATAGTCAGGGCATCAAGATA 58.849 41.667 0.00 0.00 30.85 1.98
570 571 5.011533 AGTGATAGTCAGGGCATCAAGATAC 59.988 44.000 0.00 0.00 30.85 2.24
571 572 4.901250 TGATAGTCAGGGCATCAAGATACA 59.099 41.667 0.00 0.00 0.00 2.29
572 573 5.545335 TGATAGTCAGGGCATCAAGATACAT 59.455 40.000 0.00 0.00 0.00 2.29
573 574 6.725834 TGATAGTCAGGGCATCAAGATACATA 59.274 38.462 0.00 0.00 0.00 2.29
574 575 5.894298 AGTCAGGGCATCAAGATACATAA 57.106 39.130 0.00 0.00 0.00 1.90
575 576 6.445451 AGTCAGGGCATCAAGATACATAAT 57.555 37.500 0.00 0.00 0.00 1.28
576 577 6.236409 AGTCAGGGCATCAAGATACATAATG 58.764 40.000 0.00 0.00 0.00 1.90
577 578 6.000219 GTCAGGGCATCAAGATACATAATGT 59.000 40.000 0.00 0.00 0.00 2.71
578 579 6.488006 GTCAGGGCATCAAGATACATAATGTT 59.512 38.462 0.00 0.00 0.00 2.71
579 580 7.661437 GTCAGGGCATCAAGATACATAATGTTA 59.339 37.037 0.00 0.00 0.00 2.41
580 581 7.661437 TCAGGGCATCAAGATACATAATGTTAC 59.339 37.037 0.00 0.00 0.00 2.50
581 582 7.445096 CAGGGCATCAAGATACATAATGTTACA 59.555 37.037 0.00 0.00 0.00 2.41
582 583 7.663081 AGGGCATCAAGATACATAATGTTACAG 59.337 37.037 0.00 0.00 0.00 2.74
583 584 7.661437 GGGCATCAAGATACATAATGTTACAGA 59.339 37.037 0.00 0.00 0.00 3.41
584 585 9.224267 GGCATCAAGATACATAATGTTACAGAT 57.776 33.333 0.00 0.00 0.00 2.90
593 594 9.790297 ATACATAATGTTACAGATCTATCCCCT 57.210 33.333 0.00 0.00 0.00 4.79
594 595 8.511748 ACATAATGTTACAGATCTATCCCCTT 57.488 34.615 0.00 0.00 0.00 3.95
595 596 9.615660 ACATAATGTTACAGATCTATCCCCTTA 57.384 33.333 0.00 0.00 0.00 2.69
612 613 8.946797 ATCCCCTTAAAAATAATCTCATCCTG 57.053 34.615 0.00 0.00 0.00 3.86
613 614 8.113114 TCCCCTTAAAAATAATCTCATCCTGA 57.887 34.615 0.00 0.00 0.00 3.86
614 615 7.998964 TCCCCTTAAAAATAATCTCATCCTGAC 59.001 37.037 0.00 0.00 0.00 3.51
615 616 7.779798 CCCCTTAAAAATAATCTCATCCTGACA 59.220 37.037 0.00 0.00 0.00 3.58
616 617 9.359653 CCCTTAAAAATAATCTCATCCTGACAT 57.640 33.333 0.00 0.00 0.00 3.06
622 623 9.790344 AAAATAATCTCATCCTGACATTCCTAG 57.210 33.333 0.00 0.00 0.00 3.02
623 624 5.822132 AATCTCATCCTGACATTCCTAGG 57.178 43.478 0.82 0.82 0.00 3.02
624 625 2.968574 TCTCATCCTGACATTCCTAGGC 59.031 50.000 2.96 0.00 0.00 3.93
625 626 2.971330 CTCATCCTGACATTCCTAGGCT 59.029 50.000 2.96 0.00 0.00 4.58
626 627 4.140924 TCTCATCCTGACATTCCTAGGCTA 60.141 45.833 2.96 0.00 0.00 3.93
627 628 4.556697 TCATCCTGACATTCCTAGGCTAA 58.443 43.478 2.96 0.00 0.00 3.09
628 629 4.590647 TCATCCTGACATTCCTAGGCTAAG 59.409 45.833 2.96 0.00 0.00 2.18
629 630 4.265856 TCCTGACATTCCTAGGCTAAGA 57.734 45.455 2.96 0.00 0.00 2.10
630 631 4.219115 TCCTGACATTCCTAGGCTAAGAG 58.781 47.826 2.96 0.00 0.00 2.85
631 632 4.079154 TCCTGACATTCCTAGGCTAAGAGA 60.079 45.833 2.96 0.00 0.00 3.10
632 633 4.651503 CCTGACATTCCTAGGCTAAGAGAA 59.348 45.833 2.96 0.00 0.00 2.87
633 634 5.221422 CCTGACATTCCTAGGCTAAGAGAAG 60.221 48.000 2.96 0.00 0.00 2.85
634 635 4.651503 TGACATTCCTAGGCTAAGAGAAGG 59.348 45.833 2.96 10.10 0.00 3.46
635 636 3.970640 ACATTCCTAGGCTAAGAGAAGGG 59.029 47.826 2.96 3.64 0.00 3.95
636 637 2.777459 TCCTAGGCTAAGAGAAGGGG 57.223 55.000 2.96 0.00 0.00 4.79
637 638 2.224077 TCCTAGGCTAAGAGAAGGGGA 58.776 52.381 2.96 0.00 0.00 4.81
638 639 2.590611 TCCTAGGCTAAGAGAAGGGGAA 59.409 50.000 2.96 0.00 0.00 3.97
639 640 3.013648 TCCTAGGCTAAGAGAAGGGGAAA 59.986 47.826 2.96 0.00 0.00 3.13
640 641 3.134985 CCTAGGCTAAGAGAAGGGGAAAC 59.865 52.174 0.00 0.00 0.00 2.78
656 657 4.703379 GGAAACCATCCTCATCTCATCT 57.297 45.455 0.00 0.00 45.56 2.90
657 658 5.046288 GGAAACCATCCTCATCTCATCTT 57.954 43.478 0.00 0.00 45.56 2.40
658 659 5.062528 GGAAACCATCCTCATCTCATCTTC 58.937 45.833 0.00 0.00 45.56 2.87
659 660 5.397221 GGAAACCATCCTCATCTCATCTTCA 60.397 44.000 0.00 0.00 45.56 3.02
660 661 4.686191 ACCATCCTCATCTCATCTTCAC 57.314 45.455 0.00 0.00 0.00 3.18
661 662 3.069300 ACCATCCTCATCTCATCTTCACG 59.931 47.826 0.00 0.00 0.00 4.35
662 663 3.069300 CCATCCTCATCTCATCTTCACGT 59.931 47.826 0.00 0.00 0.00 4.49
663 664 4.442612 CCATCCTCATCTCATCTTCACGTT 60.443 45.833 0.00 0.00 0.00 3.99
664 665 4.808414 TCCTCATCTCATCTTCACGTTT 57.192 40.909 0.00 0.00 0.00 3.60
665 666 5.152623 TCCTCATCTCATCTTCACGTTTT 57.847 39.130 0.00 0.00 0.00 2.43
666 667 4.931601 TCCTCATCTCATCTTCACGTTTTG 59.068 41.667 0.00 0.00 0.00 2.44
667 668 4.931601 CCTCATCTCATCTTCACGTTTTGA 59.068 41.667 0.00 0.00 0.00 2.69
668 669 5.063186 CCTCATCTCATCTTCACGTTTTGAG 59.937 44.000 0.00 0.00 34.94 3.02
669 670 4.931601 TCATCTCATCTTCACGTTTTGAGG 59.068 41.667 8.99 0.27 34.94 3.86
670 671 4.336889 TCTCATCTTCACGTTTTGAGGT 57.663 40.909 8.99 0.00 34.94 3.85
671 672 4.058124 TCTCATCTTCACGTTTTGAGGTG 58.942 43.478 8.99 2.13 34.94 4.00
672 673 4.058124 CTCATCTTCACGTTTTGAGGTGA 58.942 43.478 0.00 0.00 41.13 4.02
673 674 3.807622 TCATCTTCACGTTTTGAGGTGAC 59.192 43.478 1.85 0.00 42.43 3.67
675 676 3.869065 TCTTCACGTTTTGAGGTGACTT 58.131 40.909 1.85 0.00 44.43 3.01
676 677 3.869246 TCTTCACGTTTTGAGGTGACTTC 59.131 43.478 1.85 0.00 44.43 3.01
677 678 3.536956 TCACGTTTTGAGGTGACTTCT 57.463 42.857 0.00 0.00 44.43 2.85
678 679 3.869065 TCACGTTTTGAGGTGACTTCTT 58.131 40.909 0.00 0.00 44.43 2.52
679 680 4.258543 TCACGTTTTGAGGTGACTTCTTT 58.741 39.130 0.00 0.00 44.43 2.52
680 681 4.698304 TCACGTTTTGAGGTGACTTCTTTT 59.302 37.500 0.00 0.00 44.43 2.27
681 682 5.182380 TCACGTTTTGAGGTGACTTCTTTTT 59.818 36.000 0.00 0.00 44.43 1.94
697 698 1.702182 TTTTTGATGTGGCTGCTCCA 58.298 45.000 0.00 0.00 44.18 3.86
704 705 2.431683 TGGCTGCTCCACTGAACC 59.568 61.111 0.00 0.00 40.72 3.62
705 706 2.149383 TGGCTGCTCCACTGAACCT 61.149 57.895 0.00 0.00 40.72 3.50
706 707 0.835971 TGGCTGCTCCACTGAACCTA 60.836 55.000 0.00 0.00 40.72 3.08
707 708 0.324943 GGCTGCTCCACTGAACCTAA 59.675 55.000 0.00 0.00 34.01 2.69
708 709 1.271379 GGCTGCTCCACTGAACCTAAA 60.271 52.381 0.00 0.00 34.01 1.85
709 710 2.079925 GCTGCTCCACTGAACCTAAAG 58.920 52.381 0.00 0.00 0.00 1.85
710 711 2.704572 CTGCTCCACTGAACCTAAAGG 58.295 52.381 0.00 0.00 42.17 3.11
729 730 4.473477 AGGTACTTGATGGTTGTAGAGC 57.527 45.455 0.00 0.00 27.25 4.09
730 731 3.119101 AGGTACTTGATGGTTGTAGAGCG 60.119 47.826 0.00 0.00 27.25 5.03
731 732 2.386661 ACTTGATGGTTGTAGAGCGG 57.613 50.000 0.00 0.00 0.00 5.52
732 733 1.066143 ACTTGATGGTTGTAGAGCGGG 60.066 52.381 0.00 0.00 0.00 6.13
733 734 1.207089 CTTGATGGTTGTAGAGCGGGA 59.793 52.381 0.00 0.00 0.00 5.14
734 735 1.271856 TGATGGTTGTAGAGCGGGAA 58.728 50.000 0.00 0.00 0.00 3.97
735 736 1.837439 TGATGGTTGTAGAGCGGGAAT 59.163 47.619 0.00 0.00 0.00 3.01
736 737 2.158957 TGATGGTTGTAGAGCGGGAATC 60.159 50.000 0.00 0.00 0.00 2.52
737 738 0.174845 TGGTTGTAGAGCGGGAATCG 59.825 55.000 0.00 0.00 42.76 3.34
738 739 0.529992 GGTTGTAGAGCGGGAATCGG 60.530 60.000 0.00 0.00 39.69 4.18
745 746 4.421952 GCGGGAATCGGTTCTCTC 57.578 61.111 6.74 0.00 39.69 3.20
746 747 1.589196 GCGGGAATCGGTTCTCTCG 60.589 63.158 6.74 10.27 39.69 4.04
747 748 1.807886 CGGGAATCGGTTCTCTCGT 59.192 57.895 6.74 0.00 32.39 4.18
748 749 1.019673 CGGGAATCGGTTCTCTCGTA 58.980 55.000 6.74 0.00 32.39 3.43
749 750 1.002684 CGGGAATCGGTTCTCTCGTAG 60.003 57.143 6.74 0.00 32.39 3.51
750 751 2.295885 GGGAATCGGTTCTCTCGTAGA 58.704 52.381 8.59 0.00 31.83 2.59
751 752 2.033174 GGGAATCGGTTCTCTCGTAGAC 59.967 54.545 8.59 0.00 32.51 2.59
752 753 2.681848 GGAATCGGTTCTCTCGTAGACA 59.318 50.000 8.59 0.00 32.51 3.41
753 754 3.315749 GGAATCGGTTCTCTCGTAGACAT 59.684 47.826 8.59 0.00 32.51 3.06
754 755 4.202030 GGAATCGGTTCTCTCGTAGACATT 60.202 45.833 8.59 0.00 32.51 2.71
755 756 3.759527 TCGGTTCTCTCGTAGACATTG 57.240 47.619 0.00 0.00 32.51 2.82
756 757 2.422479 TCGGTTCTCTCGTAGACATTGG 59.578 50.000 0.00 0.00 32.51 3.16
757 758 2.479730 CGGTTCTCTCGTAGACATTGGG 60.480 54.545 0.00 0.00 32.51 4.12
758 759 2.541556 GTTCTCTCGTAGACATTGGGC 58.458 52.381 0.00 0.00 32.51 5.36
759 760 2.145397 TCTCTCGTAGACATTGGGCT 57.855 50.000 0.00 0.00 0.00 5.19
760 761 2.457598 TCTCTCGTAGACATTGGGCTT 58.542 47.619 0.00 0.00 0.00 4.35
761 762 2.166459 TCTCTCGTAGACATTGGGCTTG 59.834 50.000 0.00 0.00 0.00 4.01
762 763 1.899814 TCTCGTAGACATTGGGCTTGT 59.100 47.619 0.00 0.00 0.00 3.16
763 764 2.002586 CTCGTAGACATTGGGCTTGTG 58.997 52.381 0.00 0.00 0.00 3.33
764 765 1.346395 TCGTAGACATTGGGCTTGTGT 59.654 47.619 0.00 0.00 0.00 3.72
765 766 1.464608 CGTAGACATTGGGCTTGTGTG 59.535 52.381 0.00 0.00 0.00 3.82
766 767 1.812571 GTAGACATTGGGCTTGTGTGG 59.187 52.381 0.00 0.00 0.00 4.17
767 768 0.540365 AGACATTGGGCTTGTGTGGG 60.540 55.000 0.00 0.00 0.00 4.61
768 769 0.539438 GACATTGGGCTTGTGTGGGA 60.539 55.000 0.00 0.00 0.00 4.37
769 770 0.827507 ACATTGGGCTTGTGTGGGAC 60.828 55.000 0.00 0.00 0.00 4.46
770 771 0.540365 CATTGGGCTTGTGTGGGACT 60.540 55.000 0.00 0.00 0.00 3.85
771 772 0.188342 ATTGGGCTTGTGTGGGACTT 59.812 50.000 0.00 0.00 0.00 3.01
772 773 0.032615 TTGGGCTTGTGTGGGACTTT 60.033 50.000 0.00 0.00 0.00 2.66
773 774 0.032615 TGGGCTTGTGTGGGACTTTT 60.033 50.000 0.00 0.00 0.00 2.27
774 775 0.673985 GGGCTTGTGTGGGACTTTTC 59.326 55.000 0.00 0.00 0.00 2.29
775 776 1.692411 GGCTTGTGTGGGACTTTTCT 58.308 50.000 0.00 0.00 0.00 2.52
776 777 2.031870 GGCTTGTGTGGGACTTTTCTT 58.968 47.619 0.00 0.00 0.00 2.52
777 778 2.430694 GGCTTGTGTGGGACTTTTCTTT 59.569 45.455 0.00 0.00 0.00 2.52
778 779 3.118775 GGCTTGTGTGGGACTTTTCTTTT 60.119 43.478 0.00 0.00 0.00 2.27
779 780 4.503910 GCTTGTGTGGGACTTTTCTTTTT 58.496 39.130 0.00 0.00 0.00 1.94
798 799 2.957491 TTTGAACTTGGCTTGTGTGG 57.043 45.000 0.00 0.00 0.00 4.17
799 800 1.110442 TTGAACTTGGCTTGTGTGGG 58.890 50.000 0.00 0.00 0.00 4.61
800 801 0.257328 TGAACTTGGCTTGTGTGGGA 59.743 50.000 0.00 0.00 0.00 4.37
801 802 0.668535 GAACTTGGCTTGTGTGGGAC 59.331 55.000 0.00 0.00 0.00 4.46
802 803 0.258774 AACTTGGCTTGTGTGGGACT 59.741 50.000 0.00 0.00 0.00 3.85
803 804 0.258774 ACTTGGCTTGTGTGGGACTT 59.741 50.000 0.00 0.00 0.00 3.01
804 805 0.670162 CTTGGCTTGTGTGGGACTTG 59.330 55.000 0.00 0.00 0.00 3.16
805 806 0.754957 TTGGCTTGTGTGGGACTTGG 60.755 55.000 0.00 0.00 0.00 3.61
806 807 1.150536 GGCTTGTGTGGGACTTGGA 59.849 57.895 0.00 0.00 0.00 3.53
807 808 0.890996 GGCTTGTGTGGGACTTGGAG 60.891 60.000 0.00 0.00 0.00 3.86
808 809 0.179018 GCTTGTGTGGGACTTGGAGT 60.179 55.000 0.00 0.00 0.00 3.85
809 810 1.750682 GCTTGTGTGGGACTTGGAGTT 60.751 52.381 0.00 0.00 0.00 3.01
810 811 1.949525 CTTGTGTGGGACTTGGAGTTG 59.050 52.381 0.00 0.00 0.00 3.16
811 812 0.182537 TGTGTGGGACTTGGAGTTGG 59.817 55.000 0.00 0.00 0.00 3.77
812 813 0.472471 GTGTGGGACTTGGAGTTGGA 59.528 55.000 0.00 0.00 0.00 3.53
813 814 1.133915 GTGTGGGACTTGGAGTTGGAA 60.134 52.381 0.00 0.00 0.00 3.53
814 815 1.142870 TGTGGGACTTGGAGTTGGAAG 59.857 52.381 0.00 0.00 0.00 3.46
815 816 1.420138 GTGGGACTTGGAGTTGGAAGA 59.580 52.381 0.00 0.00 0.00 2.87
816 817 2.131854 TGGGACTTGGAGTTGGAAGAA 58.868 47.619 0.00 0.00 0.00 2.52
817 818 2.716424 TGGGACTTGGAGTTGGAAGAAT 59.284 45.455 0.00 0.00 0.00 2.40
818 819 3.140144 TGGGACTTGGAGTTGGAAGAATT 59.860 43.478 0.00 0.00 0.00 2.17
819 820 4.152647 GGGACTTGGAGTTGGAAGAATTT 58.847 43.478 0.00 0.00 0.00 1.82
820 821 4.021981 GGGACTTGGAGTTGGAAGAATTTG 60.022 45.833 0.00 0.00 0.00 2.32
821 822 4.584743 GGACTTGGAGTTGGAAGAATTTGT 59.415 41.667 0.00 0.00 0.00 2.83
822 823 5.507985 GGACTTGGAGTTGGAAGAATTTGTG 60.508 44.000 0.00 0.00 0.00 3.33
823 824 4.202151 ACTTGGAGTTGGAAGAATTTGTGC 60.202 41.667 0.00 0.00 0.00 4.57
824 825 3.565307 TGGAGTTGGAAGAATTTGTGCT 58.435 40.909 0.00 0.00 0.00 4.40
825 826 4.724399 TGGAGTTGGAAGAATTTGTGCTA 58.276 39.130 0.00 0.00 0.00 3.49
826 827 4.518970 TGGAGTTGGAAGAATTTGTGCTAC 59.481 41.667 0.00 0.00 0.00 3.58
827 828 4.762251 GGAGTTGGAAGAATTTGTGCTACT 59.238 41.667 0.00 0.00 0.00 2.57
828 829 5.335191 GGAGTTGGAAGAATTTGTGCTACTG 60.335 44.000 3.59 0.00 0.00 2.74
829 830 4.520492 AGTTGGAAGAATTTGTGCTACTGG 59.480 41.667 0.00 0.00 0.00 4.00
830 831 4.365514 TGGAAGAATTTGTGCTACTGGA 57.634 40.909 0.00 0.00 0.00 3.86
831 832 4.724399 TGGAAGAATTTGTGCTACTGGAA 58.276 39.130 0.00 0.00 0.00 3.53
832 833 4.518970 TGGAAGAATTTGTGCTACTGGAAC 59.481 41.667 0.00 0.00 0.00 3.62
833 834 4.518970 GGAAGAATTTGTGCTACTGGAACA 59.481 41.667 0.00 0.00 0.00 3.18
834 835 5.438761 AAGAATTTGTGCTACTGGAACAC 57.561 39.130 0.00 0.00 32.23 3.32
835 836 4.460263 AGAATTTGTGCTACTGGAACACA 58.540 39.130 0.00 0.00 42.27 3.72
836 837 5.072741 AGAATTTGTGCTACTGGAACACAT 58.927 37.500 0.00 0.00 43.34 3.21
837 838 4.771590 ATTTGTGCTACTGGAACACATG 57.228 40.909 0.00 0.00 43.34 3.21
838 839 2.183478 TGTGCTACTGGAACACATGG 57.817 50.000 0.00 0.00 39.29 3.66
839 840 1.696884 TGTGCTACTGGAACACATGGA 59.303 47.619 0.00 0.00 39.29 3.41
840 841 2.105649 TGTGCTACTGGAACACATGGAA 59.894 45.455 0.00 0.00 39.29 3.53
841 842 3.244875 TGTGCTACTGGAACACATGGAAT 60.245 43.478 0.00 0.00 39.29 3.01
842 843 4.019771 TGTGCTACTGGAACACATGGAATA 60.020 41.667 0.00 0.00 39.29 1.75
843 844 4.332819 GTGCTACTGGAACACATGGAATAC 59.667 45.833 0.00 0.00 34.43 1.89
844 845 3.555956 GCTACTGGAACACATGGAATACG 59.444 47.826 0.00 0.00 0.00 3.06
845 846 3.695830 ACTGGAACACATGGAATACGT 57.304 42.857 0.00 0.00 0.00 3.57
846 847 3.596214 ACTGGAACACATGGAATACGTC 58.404 45.455 0.00 0.00 0.00 4.34
847 848 3.007506 ACTGGAACACATGGAATACGTCA 59.992 43.478 0.00 0.00 0.00 4.35
848 849 4.000325 CTGGAACACATGGAATACGTCAA 59.000 43.478 0.00 0.00 0.00 3.18
849 850 4.000325 TGGAACACATGGAATACGTCAAG 59.000 43.478 0.00 0.00 0.00 3.02
850 851 3.181510 GGAACACATGGAATACGTCAAGC 60.182 47.826 0.00 0.00 0.00 4.01
851 852 3.052455 ACACATGGAATACGTCAAGCA 57.948 42.857 0.00 0.00 0.00 3.91
852 853 2.742053 ACACATGGAATACGTCAAGCAC 59.258 45.455 0.00 0.00 0.00 4.40
853 854 2.741517 CACATGGAATACGTCAAGCACA 59.258 45.455 0.00 0.00 0.00 4.57
854 855 3.374988 CACATGGAATACGTCAAGCACAT 59.625 43.478 0.00 0.00 0.00 3.21
855 856 3.623060 ACATGGAATACGTCAAGCACATC 59.377 43.478 0.00 0.00 0.00 3.06
856 857 2.267426 TGGAATACGTCAAGCACATCG 58.733 47.619 0.00 0.00 0.00 3.84
936 937 0.321298 ACGGCTCCTGTAAAACGCAT 60.321 50.000 0.00 0.00 0.00 4.73
1006 1008 0.039527 ACCCGAAAACGAAATGCAGC 60.040 50.000 0.00 0.00 0.00 5.25
1302 1322 1.144936 CCTCCAGTCGCCTTCATCC 59.855 63.158 0.00 0.00 0.00 3.51
1581 1601 2.101582 GACCTACAACATGCTCCTCGAT 59.898 50.000 0.00 0.00 0.00 3.59
1750 1770 1.590259 GACGAGATGCGGAAGGAGC 60.590 63.158 0.00 0.00 46.49 4.70
1803 1823 2.515523 GTGCATGCCCTCGCTCAT 60.516 61.111 16.68 0.00 35.36 2.90
1863 1883 3.155167 CCTCTCTACGGGGTGGCC 61.155 72.222 0.00 0.00 0.00 5.36
2019 2039 0.821711 TGTTCTTTGCCAAGACCGGG 60.822 55.000 6.32 0.00 38.86 5.73
2621 2641 2.091775 TCTCTAGGTTAGCCTCTCCACC 60.092 54.545 0.00 0.00 45.64 4.61
2699 2719 7.281100 CAGGGATTTAGAAGTTGATCACCTAAC 59.719 40.741 0.00 0.00 0.00 2.34
2941 2961 1.479323 GTTGTGCTCCATTGCCATGAT 59.521 47.619 0.00 0.00 31.07 2.45
2997 3017 4.101585 CCTGTTAGATCACCCAGCTAATCA 59.898 45.833 0.00 0.00 0.00 2.57
3435 4134 1.527311 GAAGTCTGAGCACAAACGACC 59.473 52.381 0.00 0.00 0.00 4.79
3436 4135 0.753262 AGTCTGAGCACAAACGACCT 59.247 50.000 0.00 0.00 0.00 3.85
3437 4136 1.140816 GTCTGAGCACAAACGACCTC 58.859 55.000 0.00 0.00 0.00 3.85
3438 4137 0.033504 TCTGAGCACAAACGACCTCC 59.966 55.000 0.00 0.00 0.00 4.30
3439 4138 0.249868 CTGAGCACAAACGACCTCCA 60.250 55.000 0.00 0.00 0.00 3.86
3440 4139 0.396435 TGAGCACAAACGACCTCCAT 59.604 50.000 0.00 0.00 0.00 3.41
3441 4140 0.798776 GAGCACAAACGACCTCCATG 59.201 55.000 0.00 0.00 0.00 3.66
3442 4141 0.606401 AGCACAAACGACCTCCATGG 60.606 55.000 4.97 4.97 42.93 3.66
3452 4151 1.351080 ACCTCCATGGCTCCATCCTG 61.351 60.000 6.96 0.00 40.22 3.86
3612 4311 1.067295 TTGGAGGGACAGCAGTCAAT 58.933 50.000 11.67 0.00 46.80 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.798682 TCTCTTCCCTCCCCCGGC 62.799 72.222 0.00 0.00 0.00 6.13
10 11 1.839296 GATCTCTTCCCTCCCCCGG 60.839 68.421 0.00 0.00 0.00 5.73
11 12 1.839296 GGATCTCTTCCCTCCCCCG 60.839 68.421 0.00 0.00 38.75 5.73
12 13 1.839296 CGGATCTCTTCCCTCCCCC 60.839 68.421 0.00 0.00 42.06 5.40
13 14 2.512355 GCGGATCTCTTCCCTCCCC 61.512 68.421 0.00 0.00 42.06 4.81
14 15 1.458588 AGCGGATCTCTTCCCTCCC 60.459 63.158 0.00 0.00 42.06 4.30
15 16 1.801309 CGAGCGGATCTCTTCCCTCC 61.801 65.000 0.00 0.00 42.06 4.30
16 17 1.657556 CGAGCGGATCTCTTCCCTC 59.342 63.158 0.00 0.00 42.06 4.30
17 18 1.830408 CCGAGCGGATCTCTTCCCT 60.830 63.158 2.00 0.00 42.06 4.20
18 19 2.731374 CCGAGCGGATCTCTTCCC 59.269 66.667 2.00 0.00 42.06 3.97
19 20 2.028337 GCCGAGCGGATCTCTTCC 59.972 66.667 13.94 0.00 39.70 3.46
20 21 2.028337 GGCCGAGCGGATCTCTTC 59.972 66.667 13.94 0.00 39.70 2.87
21 22 3.541713 GGGCCGAGCGGATCTCTT 61.542 66.667 13.94 0.00 39.70 2.85
22 23 4.841617 TGGGCCGAGCGGATCTCT 62.842 66.667 13.94 0.00 39.70 3.10
23 24 4.292178 CTGGGCCGAGCGGATCTC 62.292 72.222 13.94 0.00 37.50 2.75
45 46 3.501040 TTCCTTGGTTGGGTCGGCC 62.501 63.158 0.00 0.00 0.00 6.13
46 47 1.971695 CTTCCTTGGTTGGGTCGGC 60.972 63.158 0.00 0.00 0.00 5.54
47 48 1.303317 CCTTCCTTGGTTGGGTCGG 60.303 63.158 0.00 0.00 0.00 4.79
48 49 1.971695 GCCTTCCTTGGTTGGGTCG 60.972 63.158 0.00 0.00 0.00 4.79
49 50 1.606601 GGCCTTCCTTGGTTGGGTC 60.607 63.158 0.00 0.00 0.00 4.46
50 51 2.371897 CTGGCCTTCCTTGGTTGGGT 62.372 60.000 3.32 0.00 0.00 4.51
51 52 1.607467 CTGGCCTTCCTTGGTTGGG 60.607 63.158 3.32 0.00 0.00 4.12
52 53 1.153756 ACTGGCCTTCCTTGGTTGG 59.846 57.895 3.32 0.00 0.00 3.77
53 54 0.178992 TCACTGGCCTTCCTTGGTTG 60.179 55.000 3.32 0.00 0.00 3.77
54 55 0.111253 CTCACTGGCCTTCCTTGGTT 59.889 55.000 3.32 0.00 0.00 3.67
55 56 0.768221 TCTCACTGGCCTTCCTTGGT 60.768 55.000 3.32 0.00 0.00 3.67
56 57 0.035630 CTCTCACTGGCCTTCCTTGG 60.036 60.000 3.32 0.00 0.00 3.61
57 58 0.035630 CCTCTCACTGGCCTTCCTTG 60.036 60.000 3.32 0.00 0.00 3.61
58 59 1.204113 CCCTCTCACTGGCCTTCCTT 61.204 60.000 3.32 0.00 0.00 3.36
59 60 1.614824 CCCTCTCACTGGCCTTCCT 60.615 63.158 3.32 0.00 0.00 3.36
60 61 2.674220 CCCCTCTCACTGGCCTTCC 61.674 68.421 3.32 0.00 0.00 3.46
61 62 1.613630 TCCCCTCTCACTGGCCTTC 60.614 63.158 3.32 0.00 0.00 3.46
62 63 1.614824 CTCCCCTCTCACTGGCCTT 60.615 63.158 3.32 0.00 0.00 4.35
63 64 2.040278 CTCCCCTCTCACTGGCCT 59.960 66.667 3.32 0.00 0.00 5.19
64 65 3.086600 CCTCCCCTCTCACTGGCC 61.087 72.222 0.00 0.00 0.00 5.36
65 66 2.039624 TCCTCCCCTCTCACTGGC 59.960 66.667 0.00 0.00 0.00 4.85
66 67 2.063378 GCTCCTCCCCTCTCACTGG 61.063 68.421 0.00 0.00 0.00 4.00
67 68 2.422231 CGCTCCTCCCCTCTCACTG 61.422 68.421 0.00 0.00 0.00 3.66
68 69 2.043450 CGCTCCTCCCCTCTCACT 60.043 66.667 0.00 0.00 0.00 3.41
69 70 3.844090 GCGCTCCTCCCCTCTCAC 61.844 72.222 0.00 0.00 0.00 3.51
91 92 4.612412 TTGTGGGTCGGCCGTGTC 62.612 66.667 27.15 16.32 34.97 3.67
92 93 4.619227 CTTGTGGGTCGGCCGTGT 62.619 66.667 27.15 0.00 34.97 4.49
99 100 3.567579 ATGTGGGCCTTGTGGGTCG 62.568 63.158 4.53 0.00 41.51 4.79
100 101 1.678970 GATGTGGGCCTTGTGGGTC 60.679 63.158 4.53 0.00 39.42 4.46
101 102 2.430704 CTGATGTGGGCCTTGTGGGT 62.431 60.000 4.53 0.00 37.43 4.51
102 103 1.679977 CTGATGTGGGCCTTGTGGG 60.680 63.158 4.53 0.00 38.36 4.61
103 104 2.345760 GCTGATGTGGGCCTTGTGG 61.346 63.158 4.53 0.00 0.00 4.17
104 105 2.345760 GGCTGATGTGGGCCTTGTG 61.346 63.158 4.53 0.00 44.48 3.33
105 106 2.036256 GGCTGATGTGGGCCTTGT 59.964 61.111 4.53 0.00 44.48 3.16
106 107 2.757099 GGGCTGATGTGGGCCTTG 60.757 66.667 4.53 0.00 46.80 3.61
111 112 4.828296 GGGCTGGGCTGATGTGGG 62.828 72.222 0.00 0.00 0.00 4.61
112 113 4.051167 TGGGCTGGGCTGATGTGG 62.051 66.667 0.00 0.00 0.00 4.17
113 114 2.753043 GTGGGCTGGGCTGATGTG 60.753 66.667 0.00 0.00 0.00 3.21
114 115 4.052518 GGTGGGCTGGGCTGATGT 62.053 66.667 0.00 0.00 0.00 3.06
115 116 4.051167 TGGTGGGCTGGGCTGATG 62.051 66.667 0.00 0.00 0.00 3.07
116 117 4.052518 GTGGTGGGCTGGGCTGAT 62.053 66.667 0.00 0.00 0.00 2.90
123 124 4.704833 CTCCCGTGTGGTGGGCTG 62.705 72.222 0.00 0.00 46.92 4.85
144 145 2.151307 GAAACCCTTCCCTCCCCCAC 62.151 65.000 0.00 0.00 0.00 4.61
145 146 1.855451 GAAACCCTTCCCTCCCCCA 60.855 63.158 0.00 0.00 0.00 4.96
146 147 2.623450 GGAAACCCTTCCCTCCCCC 61.623 68.421 0.00 0.00 44.91 5.40
147 148 3.097293 GGAAACCCTTCCCTCCCC 58.903 66.667 0.00 0.00 44.91 4.81
188 189 4.742201 CCGTGCCCTCTGTCGGTG 62.742 72.222 0.00 0.00 38.45 4.94
214 215 1.296056 AATTCTGAAACGGCCGGTCG 61.296 55.000 29.88 29.88 0.00 4.79
215 216 0.879090 AAATTCTGAAACGGCCGGTC 59.121 50.000 31.76 25.49 0.00 4.79
216 217 0.879090 GAAATTCTGAAACGGCCGGT 59.121 50.000 31.76 23.68 0.00 5.28
217 218 0.878416 TGAAATTCTGAAACGGCCGG 59.122 50.000 31.76 11.50 0.00 6.13
218 219 2.287308 TGTTGAAATTCTGAAACGGCCG 60.287 45.455 26.86 26.86 0.00 6.13
219 220 3.363341 TGTTGAAATTCTGAAACGGCC 57.637 42.857 0.00 0.00 0.00 6.13
220 221 4.545610 TCATGTTGAAATTCTGAAACGGC 58.454 39.130 0.00 0.00 0.00 5.68
221 222 6.380995 TGATCATGTTGAAATTCTGAAACGG 58.619 36.000 0.00 0.00 0.00 4.44
222 223 7.856492 TTGATCATGTTGAAATTCTGAAACG 57.144 32.000 0.00 0.00 0.00 3.60
223 224 9.414295 TGATTGATCATGTTGAAATTCTGAAAC 57.586 29.630 0.00 0.00 0.00 2.78
224 225 9.984190 TTGATTGATCATGTTGAAATTCTGAAA 57.016 25.926 0.00 0.00 36.56 2.69
225 226 9.634163 CTTGATTGATCATGTTGAAATTCTGAA 57.366 29.630 0.00 0.00 36.56 3.02
226 227 8.799367 ACTTGATTGATCATGTTGAAATTCTGA 58.201 29.630 0.00 0.00 40.84 3.27
227 228 8.981724 ACTTGATTGATCATGTTGAAATTCTG 57.018 30.769 0.00 0.00 40.84 3.02
237 238 5.771666 AGTGGACAAACTTGATTGATCATGT 59.228 36.000 0.00 6.68 44.12 3.21
238 239 6.150641 AGAGTGGACAAACTTGATTGATCATG 59.849 38.462 0.00 5.59 36.56 3.07
239 240 6.243900 AGAGTGGACAAACTTGATTGATCAT 58.756 36.000 0.00 0.00 36.56 2.45
240 241 5.624159 AGAGTGGACAAACTTGATTGATCA 58.376 37.500 0.00 0.00 34.38 2.92
241 242 6.314896 CCTAGAGTGGACAAACTTGATTGATC 59.685 42.308 0.00 0.00 34.38 2.92
242 243 6.176183 CCTAGAGTGGACAAACTTGATTGAT 58.824 40.000 0.00 0.00 34.38 2.57
243 244 5.513094 CCCTAGAGTGGACAAACTTGATTGA 60.513 44.000 0.00 0.00 34.38 2.57
244 245 4.697352 CCCTAGAGTGGACAAACTTGATTG 59.303 45.833 0.00 0.00 36.37 2.67
245 246 4.351111 ACCCTAGAGTGGACAAACTTGATT 59.649 41.667 0.00 0.00 0.00 2.57
246 247 3.910627 ACCCTAGAGTGGACAAACTTGAT 59.089 43.478 0.00 0.00 0.00 2.57
247 248 3.071023 CACCCTAGAGTGGACAAACTTGA 59.929 47.826 0.00 0.00 33.95 3.02
248 249 3.181454 ACACCCTAGAGTGGACAAACTTG 60.181 47.826 9.40 0.00 42.28 3.16
249 250 3.046374 ACACCCTAGAGTGGACAAACTT 58.954 45.455 9.40 0.00 42.28 2.66
250 251 2.690840 ACACCCTAGAGTGGACAAACT 58.309 47.619 9.40 0.00 42.28 2.66
251 252 3.487120 AACACCCTAGAGTGGACAAAC 57.513 47.619 9.40 0.00 42.28 2.93
252 253 3.456644 TCAAACACCCTAGAGTGGACAAA 59.543 43.478 9.40 0.00 42.28 2.83
253 254 3.042682 TCAAACACCCTAGAGTGGACAA 58.957 45.455 9.40 0.00 42.28 3.18
254 255 2.684943 TCAAACACCCTAGAGTGGACA 58.315 47.619 9.40 0.00 42.28 4.02
255 256 3.764237 TTCAAACACCCTAGAGTGGAC 57.236 47.619 9.40 0.00 42.28 4.02
256 257 4.993705 ATTTCAAACACCCTAGAGTGGA 57.006 40.909 9.40 0.00 42.28 4.02
257 258 4.941873 GGTATTTCAAACACCCTAGAGTGG 59.058 45.833 9.40 0.00 42.28 4.00
258 259 5.556915 TGGTATTTCAAACACCCTAGAGTG 58.443 41.667 2.34 2.34 43.65 3.51
259 260 5.836024 TGGTATTTCAAACACCCTAGAGT 57.164 39.130 0.00 0.00 0.00 3.24
260 261 6.349363 GCTTTGGTATTTCAAACACCCTAGAG 60.349 42.308 0.00 0.00 33.62 2.43
261 262 5.475564 GCTTTGGTATTTCAAACACCCTAGA 59.524 40.000 0.00 0.00 33.62 2.43
262 263 5.242838 TGCTTTGGTATTTCAAACACCCTAG 59.757 40.000 0.00 0.00 33.62 3.02
263 264 5.141182 TGCTTTGGTATTTCAAACACCCTA 58.859 37.500 0.00 0.00 33.62 3.53
264 265 3.964031 TGCTTTGGTATTTCAAACACCCT 59.036 39.130 0.00 0.00 33.62 4.34
265 266 4.329462 TGCTTTGGTATTTCAAACACCC 57.671 40.909 0.00 0.00 33.62 4.61
266 267 5.757808 ACAATGCTTTGGTATTTCAAACACC 59.242 36.000 15.92 0.00 37.15 4.16
267 268 6.843069 ACAATGCTTTGGTATTTCAAACAC 57.157 33.333 15.92 0.00 37.15 3.32
268 269 7.856145 AAACAATGCTTTGGTATTTCAAACA 57.144 28.000 15.92 0.00 37.15 2.83
295 296 9.941325 AGCAATTTAATTGGAAACATTCACATA 57.059 25.926 17.89 0.00 42.32 2.29
296 297 8.851541 AGCAATTTAATTGGAAACATTCACAT 57.148 26.923 17.89 0.00 42.32 3.21
297 298 9.770097 TTAGCAATTTAATTGGAAACATTCACA 57.230 25.926 17.89 0.00 42.32 3.58
302 303 8.729756 GCCTTTTAGCAATTTAATTGGAAACAT 58.270 29.630 17.89 0.00 42.32 2.71
303 304 7.936301 AGCCTTTTAGCAATTTAATTGGAAACA 59.064 29.630 17.89 0.00 40.57 2.83
304 305 8.229811 CAGCCTTTTAGCAATTTAATTGGAAAC 58.770 33.333 17.89 2.92 40.57 2.78
305 306 8.153550 TCAGCCTTTTAGCAATTTAATTGGAAA 58.846 29.630 17.89 0.00 40.57 3.13
306 307 7.675062 TCAGCCTTTTAGCAATTTAATTGGAA 58.325 30.769 17.89 0.00 40.57 3.53
307 308 7.238486 TCAGCCTTTTAGCAATTTAATTGGA 57.762 32.000 17.89 1.76 40.57 3.53
308 309 8.496707 AATCAGCCTTTTAGCAATTTAATTGG 57.503 30.769 17.89 2.29 40.57 3.16
311 312 9.723601 TCAAAATCAGCCTTTTAGCAATTTAAT 57.276 25.926 0.00 0.00 33.01 1.40
312 313 9.553064 TTCAAAATCAGCCTTTTAGCAATTTAA 57.447 25.926 0.00 0.00 33.01 1.52
313 314 9.553064 TTTCAAAATCAGCCTTTTAGCAATTTA 57.447 25.926 0.00 0.00 33.01 1.40
314 315 8.449251 TTTCAAAATCAGCCTTTTAGCAATTT 57.551 26.923 0.00 0.00 34.06 1.82
315 316 8.508875 CATTTCAAAATCAGCCTTTTAGCAATT 58.491 29.630 0.00 0.00 34.23 2.32
316 317 7.120138 CCATTTCAAAATCAGCCTTTTAGCAAT 59.880 33.333 0.00 0.00 34.23 3.56
317 318 6.427547 CCATTTCAAAATCAGCCTTTTAGCAA 59.572 34.615 0.00 0.00 34.23 3.91
318 319 5.933463 CCATTTCAAAATCAGCCTTTTAGCA 59.067 36.000 0.00 0.00 34.23 3.49
319 320 6.165577 TCCATTTCAAAATCAGCCTTTTAGC 58.834 36.000 0.00 0.00 0.00 3.09
320 321 8.782339 AATCCATTTCAAAATCAGCCTTTTAG 57.218 30.769 0.00 0.00 0.00 1.85
322 323 9.571816 TTTAATCCATTTCAAAATCAGCCTTTT 57.428 25.926 0.00 0.00 0.00 2.27
323 324 9.571816 TTTTAATCCATTTCAAAATCAGCCTTT 57.428 25.926 0.00 0.00 0.00 3.11
324 325 9.571816 TTTTTAATCCATTTCAAAATCAGCCTT 57.428 25.926 0.00 0.00 0.00 4.35
351 352 9.040939 GCGCCATAAAACAAATATTTAAGGATT 57.959 29.630 0.00 0.00 34.56 3.01
352 353 8.200792 TGCGCCATAAAACAAATATTTAAGGAT 58.799 29.630 4.18 0.00 34.56 3.24
353 354 7.489757 GTGCGCCATAAAACAAATATTTAAGGA 59.510 33.333 4.18 0.00 34.56 3.36
354 355 7.254286 GGTGCGCCATAAAACAAATATTTAAGG 60.254 37.037 12.58 0.00 35.33 2.69
355 356 7.491048 AGGTGCGCCATAAAACAAATATTTAAG 59.509 33.333 20.59 0.00 37.19 1.85
356 357 7.324178 AGGTGCGCCATAAAACAAATATTTAA 58.676 30.769 20.59 0.00 37.19 1.52
357 358 6.868622 AGGTGCGCCATAAAACAAATATTTA 58.131 32.000 20.59 0.00 37.19 1.40
358 359 5.729510 AGGTGCGCCATAAAACAAATATTT 58.270 33.333 20.59 0.00 37.19 1.40
359 360 5.337578 AGGTGCGCCATAAAACAAATATT 57.662 34.783 20.59 0.00 37.19 1.28
360 361 5.108517 CAAGGTGCGCCATAAAACAAATAT 58.891 37.500 20.59 0.00 37.19 1.28
361 362 4.489810 CAAGGTGCGCCATAAAACAAATA 58.510 39.130 20.59 0.00 37.19 1.40
362 363 3.324993 CAAGGTGCGCCATAAAACAAAT 58.675 40.909 20.59 0.00 37.19 2.32
363 364 2.748605 CAAGGTGCGCCATAAAACAAA 58.251 42.857 20.59 0.00 37.19 2.83
364 365 1.604185 GCAAGGTGCGCCATAAAACAA 60.604 47.619 20.59 0.00 37.19 2.83
365 366 0.038709 GCAAGGTGCGCCATAAAACA 60.039 50.000 20.59 0.00 37.19 2.83
366 367 2.736890 GCAAGGTGCGCCATAAAAC 58.263 52.632 20.59 0.00 37.19 2.43
374 375 2.180017 CATGAAGGCAAGGTGCGC 59.820 61.111 0.00 0.00 46.21 6.09
375 376 1.526575 AACCATGAAGGCAAGGTGCG 61.527 55.000 0.00 0.00 44.81 5.34
376 377 1.202348 GTAACCATGAAGGCAAGGTGC 59.798 52.381 0.00 0.00 44.81 5.01
377 378 2.489329 CTGTAACCATGAAGGCAAGGTG 59.511 50.000 0.00 0.00 44.81 4.00
379 380 2.489329 CACTGTAACCATGAAGGCAAGG 59.511 50.000 0.00 0.00 43.14 3.61
380 381 2.489329 CCACTGTAACCATGAAGGCAAG 59.511 50.000 0.00 0.00 43.14 4.01
381 382 2.158534 ACCACTGTAACCATGAAGGCAA 60.159 45.455 0.00 0.00 43.14 4.52
382 383 1.423541 ACCACTGTAACCATGAAGGCA 59.576 47.619 0.00 0.00 43.14 4.75
383 384 1.812571 CACCACTGTAACCATGAAGGC 59.187 52.381 0.00 0.00 43.14 4.35
384 385 3.074412 GTCACCACTGTAACCATGAAGG 58.926 50.000 0.00 0.00 45.67 3.46
385 386 4.008074 AGTCACCACTGTAACCATGAAG 57.992 45.455 0.00 0.00 0.00 3.02
386 387 4.431416 AAGTCACCACTGTAACCATGAA 57.569 40.909 0.00 0.00 31.06 2.57
387 388 4.431416 AAAGTCACCACTGTAACCATGA 57.569 40.909 0.00 0.00 31.06 3.07
388 389 6.402118 CGATAAAAGTCACCACTGTAACCATG 60.402 42.308 0.00 0.00 31.06 3.66
389 390 5.642063 CGATAAAAGTCACCACTGTAACCAT 59.358 40.000 0.00 0.00 31.06 3.55
390 391 4.992319 CGATAAAAGTCACCACTGTAACCA 59.008 41.667 0.00 0.00 31.06 3.67
391 392 5.232463 TCGATAAAAGTCACCACTGTAACC 58.768 41.667 0.00 0.00 31.06 2.85
392 393 6.774354 TTCGATAAAAGTCACCACTGTAAC 57.226 37.500 0.00 0.00 31.06 2.50
393 394 7.972832 AATTCGATAAAAGTCACCACTGTAA 57.027 32.000 0.00 0.00 31.06 2.41
394 395 7.972832 AAATTCGATAAAAGTCACCACTGTA 57.027 32.000 0.00 0.00 31.06 2.74
395 396 6.877611 AAATTCGATAAAAGTCACCACTGT 57.122 33.333 0.00 0.00 31.06 3.55
396 397 9.113876 GTTAAAATTCGATAAAAGTCACCACTG 57.886 33.333 0.00 0.00 31.06 3.66
397 398 9.063615 AGTTAAAATTCGATAAAAGTCACCACT 57.936 29.630 0.00 0.00 0.00 4.00
398 399 9.326339 GAGTTAAAATTCGATAAAAGTCACCAC 57.674 33.333 0.00 0.00 0.00 4.16
399 400 8.508875 GGAGTTAAAATTCGATAAAAGTCACCA 58.491 33.333 0.00 0.00 0.00 4.17
400 401 8.508875 TGGAGTTAAAATTCGATAAAAGTCACC 58.491 33.333 0.00 0.00 0.00 4.02
401 402 9.887406 TTGGAGTTAAAATTCGATAAAAGTCAC 57.113 29.630 0.00 0.00 0.00 3.67
402 403 9.887406 GTTGGAGTTAAAATTCGATAAAAGTCA 57.113 29.630 0.00 0.00 0.00 3.41
403 404 9.887406 TGTTGGAGTTAAAATTCGATAAAAGTC 57.113 29.630 0.00 0.00 0.00 3.01
411 412 9.997482 GCTTAATATGTTGGAGTTAAAATTCGA 57.003 29.630 0.00 0.00 0.00 3.71
417 418 9.290988 TGACAAGCTTAATATGTTGGAGTTAAA 57.709 29.630 0.00 0.00 0.00 1.52
418 419 8.856153 TGACAAGCTTAATATGTTGGAGTTAA 57.144 30.769 0.00 0.00 0.00 2.01
419 420 8.856153 TTGACAAGCTTAATATGTTGGAGTTA 57.144 30.769 0.00 0.00 0.00 2.24
420 421 7.759489 TTGACAAGCTTAATATGTTGGAGTT 57.241 32.000 0.00 0.00 0.00 3.01
421 422 7.759489 TTTGACAAGCTTAATATGTTGGAGT 57.241 32.000 0.00 0.00 0.00 3.85
422 423 9.643693 ATTTTTGACAAGCTTAATATGTTGGAG 57.356 29.630 0.00 0.00 0.00 3.86
423 424 9.995003 AATTTTTGACAAGCTTAATATGTTGGA 57.005 25.926 0.00 0.00 0.00 3.53
436 437 9.914923 CCTTAACAAACTAAATTTTTGACAAGC 57.085 29.630 7.85 0.00 37.39 4.01
451 452 8.934023 TTTGGATCTTGATACCTTAACAAACT 57.066 30.769 0.00 0.00 0.00 2.66
459 460 9.713684 TGGATTTTATTTGGATCTTGATACCTT 57.286 29.630 0.00 0.00 0.00 3.50
460 461 9.136323 GTGGATTTTATTTGGATCTTGATACCT 57.864 33.333 0.00 0.00 0.00 3.08
461 462 8.912988 TGTGGATTTTATTTGGATCTTGATACC 58.087 33.333 0.00 0.00 0.00 2.73
464 465 9.258629 TCTTGTGGATTTTATTTGGATCTTGAT 57.741 29.630 0.00 0.00 0.00 2.57
465 466 8.648698 TCTTGTGGATTTTATTTGGATCTTGA 57.351 30.769 0.00 0.00 0.00 3.02
466 467 9.309516 CATCTTGTGGATTTTATTTGGATCTTG 57.690 33.333 0.00 0.00 31.27 3.02
467 468 9.039165 ACATCTTGTGGATTTTATTTGGATCTT 57.961 29.630 0.00 0.00 31.27 2.40
468 469 8.472413 CACATCTTGTGGATTTTATTTGGATCT 58.528 33.333 0.00 0.00 44.27 2.75
469 470 8.638685 CACATCTTGTGGATTTTATTTGGATC 57.361 34.615 0.00 0.00 44.27 3.36
471 472 8.814931 ATTCACATCTTGTGGATTTTATTTGGA 58.185 29.630 7.72 0.00 43.82 3.53
496 497 9.780186 GGGAGTACTGTAAAGCATAATCTTTAT 57.220 33.333 0.00 0.00 39.74 1.40
497 498 8.764558 TGGGAGTACTGTAAAGCATAATCTTTA 58.235 33.333 0.00 0.00 37.46 1.85
498 499 7.630082 TGGGAGTACTGTAAAGCATAATCTTT 58.370 34.615 0.00 0.00 39.40 2.52
499 500 7.195374 TGGGAGTACTGTAAAGCATAATCTT 57.805 36.000 0.00 0.00 0.00 2.40
500 501 6.808321 TGGGAGTACTGTAAAGCATAATCT 57.192 37.500 0.00 0.00 0.00 2.40
501 502 8.451908 AATTGGGAGTACTGTAAAGCATAATC 57.548 34.615 0.00 0.00 0.00 1.75
502 503 8.823220 AAATTGGGAGTACTGTAAAGCATAAT 57.177 30.769 0.00 0.00 0.00 1.28
503 504 8.644374 AAAATTGGGAGTACTGTAAAGCATAA 57.356 30.769 0.00 0.00 0.00 1.90
504 505 8.644374 AAAAATTGGGAGTACTGTAAAGCATA 57.356 30.769 0.00 0.00 0.00 3.14
505 506 7.539034 AAAAATTGGGAGTACTGTAAAGCAT 57.461 32.000 0.00 0.00 0.00 3.79
506 507 6.969993 AAAAATTGGGAGTACTGTAAAGCA 57.030 33.333 0.00 0.00 0.00 3.91
507 508 9.569167 GATTAAAAATTGGGAGTACTGTAAAGC 57.431 33.333 0.00 0.00 0.00 3.51
512 513 8.934023 TCAAGATTAAAAATTGGGAGTACTGT 57.066 30.769 0.00 0.00 0.00 3.55
513 514 9.014297 ACTCAAGATTAAAAATTGGGAGTACTG 57.986 33.333 0.00 0.00 31.86 2.74
532 533 9.508642 CCTGACTATCACTATGTATACTCAAGA 57.491 37.037 4.17 0.00 0.00 3.02
533 534 8.735315 CCCTGACTATCACTATGTATACTCAAG 58.265 40.741 4.17 1.75 0.00 3.02
534 535 7.176865 GCCCTGACTATCACTATGTATACTCAA 59.823 40.741 4.17 0.00 0.00 3.02
535 536 6.659668 GCCCTGACTATCACTATGTATACTCA 59.340 42.308 4.17 0.00 0.00 3.41
536 537 6.659668 TGCCCTGACTATCACTATGTATACTC 59.340 42.308 4.17 0.00 0.00 2.59
537 538 6.552932 TGCCCTGACTATCACTATGTATACT 58.447 40.000 4.17 0.00 0.00 2.12
538 539 6.835819 TGCCCTGACTATCACTATGTATAC 57.164 41.667 0.00 0.00 0.00 1.47
539 540 7.182060 TGATGCCCTGACTATCACTATGTATA 58.818 38.462 0.00 0.00 0.00 1.47
540 541 6.019108 TGATGCCCTGACTATCACTATGTAT 58.981 40.000 0.00 0.00 0.00 2.29
541 542 5.393866 TGATGCCCTGACTATCACTATGTA 58.606 41.667 0.00 0.00 0.00 2.29
542 543 4.226384 TGATGCCCTGACTATCACTATGT 58.774 43.478 0.00 0.00 0.00 2.29
543 544 4.879197 TGATGCCCTGACTATCACTATG 57.121 45.455 0.00 0.00 0.00 2.23
544 545 5.150715 TCTTGATGCCCTGACTATCACTAT 58.849 41.667 0.00 0.00 31.11 2.12
545 546 4.546674 TCTTGATGCCCTGACTATCACTA 58.453 43.478 0.00 0.00 31.11 2.74
546 547 3.378512 TCTTGATGCCCTGACTATCACT 58.621 45.455 0.00 0.00 31.11 3.41
547 548 3.827008 TCTTGATGCCCTGACTATCAC 57.173 47.619 0.00 0.00 31.11 3.06
548 549 4.901250 TGTATCTTGATGCCCTGACTATCA 59.099 41.667 0.00 0.00 0.00 2.15
549 550 5.474578 TGTATCTTGATGCCCTGACTATC 57.525 43.478 0.00 0.00 0.00 2.08
550 551 7.559335 TTATGTATCTTGATGCCCTGACTAT 57.441 36.000 0.00 0.00 0.00 2.12
551 552 6.994421 TTATGTATCTTGATGCCCTGACTA 57.006 37.500 0.00 0.00 0.00 2.59
552 553 5.894298 TTATGTATCTTGATGCCCTGACT 57.106 39.130 0.00 0.00 0.00 3.41
553 554 6.000219 ACATTATGTATCTTGATGCCCTGAC 59.000 40.000 0.00 0.00 0.00 3.51
554 555 6.191657 ACATTATGTATCTTGATGCCCTGA 57.808 37.500 0.00 0.00 0.00 3.86
555 556 6.889301 AACATTATGTATCTTGATGCCCTG 57.111 37.500 0.00 0.00 0.00 4.45
556 557 7.517320 TGTAACATTATGTATCTTGATGCCCT 58.483 34.615 0.00 0.00 0.00 5.19
557 558 7.661437 TCTGTAACATTATGTATCTTGATGCCC 59.339 37.037 0.00 0.00 0.00 5.36
558 559 8.607441 TCTGTAACATTATGTATCTTGATGCC 57.393 34.615 0.00 0.00 0.00 4.40
567 568 9.790297 AGGGGATAGATCTGTAACATTATGTAT 57.210 33.333 5.18 0.00 0.00 2.29
568 569 9.615660 AAGGGGATAGATCTGTAACATTATGTA 57.384 33.333 5.18 0.00 0.00 2.29
569 570 8.511748 AAGGGGATAGATCTGTAACATTATGT 57.488 34.615 5.18 0.00 0.00 2.29
587 588 8.736675 TCAGGATGAGATTATTTTTAAGGGGAT 58.263 33.333 0.00 0.00 42.56 3.85
588 589 8.113114 TCAGGATGAGATTATTTTTAAGGGGA 57.887 34.615 0.00 0.00 42.56 4.81
606 607 4.590647 TCTTAGCCTAGGAATGTCAGGATG 59.409 45.833 14.75 0.00 37.54 3.51
607 608 4.820775 TCTTAGCCTAGGAATGTCAGGAT 58.179 43.478 14.75 0.00 31.79 3.24
608 609 4.079154 TCTCTTAGCCTAGGAATGTCAGGA 60.079 45.833 14.75 0.00 0.00 3.86
609 610 4.219115 TCTCTTAGCCTAGGAATGTCAGG 58.781 47.826 14.75 0.00 0.00 3.86
610 611 5.221422 CCTTCTCTTAGCCTAGGAATGTCAG 60.221 48.000 14.75 0.15 0.00 3.51
611 612 4.651503 CCTTCTCTTAGCCTAGGAATGTCA 59.348 45.833 14.75 0.00 0.00 3.58
612 613 4.039852 CCCTTCTCTTAGCCTAGGAATGTC 59.960 50.000 14.75 0.00 0.00 3.06
613 614 3.970640 CCCTTCTCTTAGCCTAGGAATGT 59.029 47.826 14.75 0.00 0.00 2.71
614 615 3.326297 CCCCTTCTCTTAGCCTAGGAATG 59.674 52.174 14.75 1.99 0.00 2.67
615 616 3.210074 TCCCCTTCTCTTAGCCTAGGAAT 59.790 47.826 14.75 2.02 0.00 3.01
616 617 2.590611 TCCCCTTCTCTTAGCCTAGGAA 59.409 50.000 14.75 0.00 0.00 3.36
617 618 2.224077 TCCCCTTCTCTTAGCCTAGGA 58.776 52.381 14.75 0.00 0.00 2.94
618 619 2.777459 TCCCCTTCTCTTAGCCTAGG 57.223 55.000 3.67 3.67 0.00 3.02
619 620 3.134985 GGTTTCCCCTTCTCTTAGCCTAG 59.865 52.174 0.00 0.00 0.00 3.02
620 621 3.113043 GGTTTCCCCTTCTCTTAGCCTA 58.887 50.000 0.00 0.00 0.00 3.93
621 622 1.916874 GGTTTCCCCTTCTCTTAGCCT 59.083 52.381 0.00 0.00 0.00 4.58
622 623 1.633945 TGGTTTCCCCTTCTCTTAGCC 59.366 52.381 0.00 0.00 0.00 3.93
623 624 3.546724 GATGGTTTCCCCTTCTCTTAGC 58.453 50.000 0.00 0.00 35.10 3.09
624 625 3.783082 AGGATGGTTTCCCCTTCTCTTAG 59.217 47.826 0.00 0.00 46.81 2.18
625 626 3.780850 GAGGATGGTTTCCCCTTCTCTTA 59.219 47.826 0.00 0.00 46.81 2.10
626 627 2.578480 GAGGATGGTTTCCCCTTCTCTT 59.422 50.000 0.00 0.00 46.81 2.85
627 628 2.200955 GAGGATGGTTTCCCCTTCTCT 58.799 52.381 0.00 0.00 46.81 3.10
628 629 1.916181 TGAGGATGGTTTCCCCTTCTC 59.084 52.381 0.00 0.00 46.81 2.87
629 630 2.059756 TGAGGATGGTTTCCCCTTCT 57.940 50.000 0.00 0.00 46.81 2.85
630 631 2.511637 AGATGAGGATGGTTTCCCCTTC 59.488 50.000 0.00 0.00 46.81 3.46
631 632 2.511637 GAGATGAGGATGGTTTCCCCTT 59.488 50.000 0.00 0.00 46.81 3.95
632 633 2.131023 GAGATGAGGATGGTTTCCCCT 58.869 52.381 0.00 0.00 46.81 4.79
633 634 1.846439 TGAGATGAGGATGGTTTCCCC 59.154 52.381 0.00 0.00 46.81 4.81
634 635 3.393941 AGATGAGATGAGGATGGTTTCCC 59.606 47.826 0.00 0.00 46.81 3.97
635 636 4.703379 AGATGAGATGAGGATGGTTTCC 57.297 45.455 0.00 0.00 45.85 3.13
636 637 5.526846 GTGAAGATGAGATGAGGATGGTTTC 59.473 44.000 0.00 0.00 0.00 2.78
637 638 5.435291 GTGAAGATGAGATGAGGATGGTTT 58.565 41.667 0.00 0.00 0.00 3.27
638 639 4.442612 CGTGAAGATGAGATGAGGATGGTT 60.443 45.833 0.00 0.00 0.00 3.67
639 640 3.069300 CGTGAAGATGAGATGAGGATGGT 59.931 47.826 0.00 0.00 0.00 3.55
640 641 3.069300 ACGTGAAGATGAGATGAGGATGG 59.931 47.826 0.00 0.00 0.00 3.51
641 642 4.319139 ACGTGAAGATGAGATGAGGATG 57.681 45.455 0.00 0.00 0.00 3.51
642 643 5.350504 AAACGTGAAGATGAGATGAGGAT 57.649 39.130 0.00 0.00 0.00 3.24
643 644 4.808414 AAACGTGAAGATGAGATGAGGA 57.192 40.909 0.00 0.00 0.00 3.71
644 645 4.931601 TCAAAACGTGAAGATGAGATGAGG 59.068 41.667 0.00 0.00 31.51 3.86
645 646 5.063186 CCTCAAAACGTGAAGATGAGATGAG 59.937 44.000 14.25 0.00 39.85 2.90
646 647 4.931601 CCTCAAAACGTGAAGATGAGATGA 59.068 41.667 14.25 0.00 39.85 2.92
647 648 4.692625 ACCTCAAAACGTGAAGATGAGATG 59.307 41.667 14.25 5.20 39.85 2.90
648 649 4.692625 CACCTCAAAACGTGAAGATGAGAT 59.307 41.667 14.25 0.00 39.85 2.75
649 650 4.058124 CACCTCAAAACGTGAAGATGAGA 58.942 43.478 14.25 0.00 39.85 3.27
650 651 4.058124 TCACCTCAAAACGTGAAGATGAG 58.942 43.478 0.00 0.00 36.10 2.90
651 652 3.807622 GTCACCTCAAAACGTGAAGATGA 59.192 43.478 0.00 0.00 40.53 2.92
652 653 3.809832 AGTCACCTCAAAACGTGAAGATG 59.190 43.478 0.00 0.00 40.53 2.90
653 654 4.073293 AGTCACCTCAAAACGTGAAGAT 57.927 40.909 0.00 0.00 40.53 2.40
654 655 3.536956 AGTCACCTCAAAACGTGAAGA 57.463 42.857 0.00 0.00 40.53 2.87
655 656 3.871594 AGAAGTCACCTCAAAACGTGAAG 59.128 43.478 0.00 0.00 40.53 3.02
656 657 3.869065 AGAAGTCACCTCAAAACGTGAA 58.131 40.909 0.00 0.00 40.53 3.18
657 658 3.536956 AGAAGTCACCTCAAAACGTGA 57.463 42.857 0.00 0.00 36.67 4.35
658 659 4.616181 AAAGAAGTCACCTCAAAACGTG 57.384 40.909 0.00 0.00 0.00 4.49
659 660 5.638596 AAAAAGAAGTCACCTCAAAACGT 57.361 34.783 0.00 0.00 0.00 3.99
678 679 1.702182 TGGAGCAGCCACATCAAAAA 58.298 45.000 0.00 0.00 43.33 1.94
679 680 3.435846 TGGAGCAGCCACATCAAAA 57.564 47.368 0.00 0.00 43.33 2.44
687 688 0.835971 TAGGTTCAGTGGAGCAGCCA 60.836 55.000 2.89 0.00 46.96 4.75
688 689 0.324943 TTAGGTTCAGTGGAGCAGCC 59.675 55.000 2.89 0.00 37.10 4.85
689 690 2.079925 CTTTAGGTTCAGTGGAGCAGC 58.920 52.381 2.89 0.00 0.00 5.25
690 691 2.704572 CCTTTAGGTTCAGTGGAGCAG 58.295 52.381 2.89 0.00 0.00 4.24
691 692 2.859165 CCTTTAGGTTCAGTGGAGCA 57.141 50.000 2.89 0.00 0.00 4.26
703 704 6.942976 TCTACAACCATCAAGTACCTTTAGG 58.057 40.000 0.00 0.00 42.17 2.69
704 705 6.535508 GCTCTACAACCATCAAGTACCTTTAG 59.464 42.308 0.00 0.00 0.00 1.85
705 706 6.403878 GCTCTACAACCATCAAGTACCTTTA 58.596 40.000 0.00 0.00 0.00 1.85
706 707 5.246307 GCTCTACAACCATCAAGTACCTTT 58.754 41.667 0.00 0.00 0.00 3.11
707 708 4.620803 CGCTCTACAACCATCAAGTACCTT 60.621 45.833 0.00 0.00 0.00 3.50
708 709 3.119101 CGCTCTACAACCATCAAGTACCT 60.119 47.826 0.00 0.00 0.00 3.08
709 710 3.187700 CGCTCTACAACCATCAAGTACC 58.812 50.000 0.00 0.00 0.00 3.34
710 711 3.187700 CCGCTCTACAACCATCAAGTAC 58.812 50.000 0.00 0.00 0.00 2.73
711 712 2.167693 CCCGCTCTACAACCATCAAGTA 59.832 50.000 0.00 0.00 0.00 2.24
712 713 1.066143 CCCGCTCTACAACCATCAAGT 60.066 52.381 0.00 0.00 0.00 3.16
713 714 1.207089 TCCCGCTCTACAACCATCAAG 59.793 52.381 0.00 0.00 0.00 3.02
714 715 1.271856 TCCCGCTCTACAACCATCAA 58.728 50.000 0.00 0.00 0.00 2.57
715 716 1.271856 TTCCCGCTCTACAACCATCA 58.728 50.000 0.00 0.00 0.00 3.07
716 717 2.484889 GATTCCCGCTCTACAACCATC 58.515 52.381 0.00 0.00 0.00 3.51
717 718 1.202533 CGATTCCCGCTCTACAACCAT 60.203 52.381 0.00 0.00 0.00 3.55
718 719 0.174845 CGATTCCCGCTCTACAACCA 59.825 55.000 0.00 0.00 0.00 3.67
719 720 0.529992 CCGATTCCCGCTCTACAACC 60.530 60.000 0.00 0.00 36.84 3.77
720 721 0.175073 ACCGATTCCCGCTCTACAAC 59.825 55.000 0.00 0.00 36.84 3.32
721 722 0.899720 AACCGATTCCCGCTCTACAA 59.100 50.000 0.00 0.00 36.84 2.41
722 723 0.458669 GAACCGATTCCCGCTCTACA 59.541 55.000 0.00 0.00 36.84 2.74
723 724 0.745468 AGAACCGATTCCCGCTCTAC 59.255 55.000 0.00 0.00 35.18 2.59
724 725 1.030457 GAGAACCGATTCCCGCTCTA 58.970 55.000 0.00 0.00 35.18 2.43
725 726 0.684805 AGAGAACCGATTCCCGCTCT 60.685 55.000 0.00 0.00 35.18 4.09
726 727 0.249114 GAGAGAACCGATTCCCGCTC 60.249 60.000 0.00 0.00 35.18 5.03
727 728 1.817209 GAGAGAACCGATTCCCGCT 59.183 57.895 0.00 0.00 35.18 5.52
728 729 1.589196 CGAGAGAACCGATTCCCGC 60.589 63.158 0.00 0.00 35.18 6.13
729 730 1.002684 CTACGAGAGAACCGATTCCCG 60.003 57.143 0.00 0.00 35.18 5.14
730 731 2.033174 GTCTACGAGAGAACCGATTCCC 59.967 54.545 0.00 0.00 35.37 3.97
731 732 2.681848 TGTCTACGAGAGAACCGATTCC 59.318 50.000 0.00 0.00 35.37 3.01
732 733 4.555348 ATGTCTACGAGAGAACCGATTC 57.445 45.455 0.00 0.00 35.37 2.52
733 734 4.440250 CCAATGTCTACGAGAGAACCGATT 60.440 45.833 0.00 0.00 35.37 3.34
734 735 3.066900 CCAATGTCTACGAGAGAACCGAT 59.933 47.826 0.00 0.00 35.37 4.18
735 736 2.422479 CCAATGTCTACGAGAGAACCGA 59.578 50.000 0.00 0.00 35.37 4.69
736 737 2.479730 CCCAATGTCTACGAGAGAACCG 60.480 54.545 0.00 0.00 35.37 4.44
737 738 2.738964 GCCCAATGTCTACGAGAGAACC 60.739 54.545 0.00 0.00 35.37 3.62
738 739 2.166664 AGCCCAATGTCTACGAGAGAAC 59.833 50.000 0.00 0.00 35.37 3.01
739 740 2.457598 AGCCCAATGTCTACGAGAGAA 58.542 47.619 0.00 0.00 35.37 2.87
740 741 2.145397 AGCCCAATGTCTACGAGAGA 57.855 50.000 0.00 0.00 0.00 3.10
741 742 2.093973 ACAAGCCCAATGTCTACGAGAG 60.094 50.000 0.00 0.00 0.00 3.20
742 743 1.899814 ACAAGCCCAATGTCTACGAGA 59.100 47.619 0.00 0.00 0.00 4.04
743 744 2.002586 CACAAGCCCAATGTCTACGAG 58.997 52.381 0.00 0.00 0.00 4.18
744 745 1.346395 ACACAAGCCCAATGTCTACGA 59.654 47.619 0.00 0.00 0.00 3.43
745 746 1.464608 CACACAAGCCCAATGTCTACG 59.535 52.381 0.00 0.00 0.00 3.51
746 747 1.812571 CCACACAAGCCCAATGTCTAC 59.187 52.381 0.00 0.00 0.00 2.59
747 748 1.271871 CCCACACAAGCCCAATGTCTA 60.272 52.381 0.00 0.00 0.00 2.59
748 749 0.540365 CCCACACAAGCCCAATGTCT 60.540 55.000 0.00 0.00 0.00 3.41
749 750 0.539438 TCCCACACAAGCCCAATGTC 60.539 55.000 0.00 0.00 0.00 3.06
750 751 0.827507 GTCCCACACAAGCCCAATGT 60.828 55.000 0.00 0.00 0.00 2.71
751 752 0.540365 AGTCCCACACAAGCCCAATG 60.540 55.000 0.00 0.00 0.00 2.82
752 753 0.188342 AAGTCCCACACAAGCCCAAT 59.812 50.000 0.00 0.00 0.00 3.16
753 754 0.032615 AAAGTCCCACACAAGCCCAA 60.033 50.000 0.00 0.00 0.00 4.12
754 755 0.032615 AAAAGTCCCACACAAGCCCA 60.033 50.000 0.00 0.00 0.00 5.36
755 756 0.673985 GAAAAGTCCCACACAAGCCC 59.326 55.000 0.00 0.00 0.00 5.19
756 757 1.692411 AGAAAAGTCCCACACAAGCC 58.308 50.000 0.00 0.00 0.00 4.35
757 758 3.801114 AAAGAAAAGTCCCACACAAGC 57.199 42.857 0.00 0.00 0.00 4.01
777 778 3.594134 CCACACAAGCCAAGTTCAAAAA 58.406 40.909 0.00 0.00 0.00 1.94
778 779 2.093764 CCCACACAAGCCAAGTTCAAAA 60.094 45.455 0.00 0.00 0.00 2.44
779 780 1.480137 CCCACACAAGCCAAGTTCAAA 59.520 47.619 0.00 0.00 0.00 2.69
780 781 1.110442 CCCACACAAGCCAAGTTCAA 58.890 50.000 0.00 0.00 0.00 2.69
781 782 0.257328 TCCCACACAAGCCAAGTTCA 59.743 50.000 0.00 0.00 0.00 3.18
782 783 0.668535 GTCCCACACAAGCCAAGTTC 59.331 55.000 0.00 0.00 0.00 3.01
783 784 0.258774 AGTCCCACACAAGCCAAGTT 59.741 50.000 0.00 0.00 0.00 2.66
784 785 0.258774 AAGTCCCACACAAGCCAAGT 59.741 50.000 0.00 0.00 0.00 3.16
785 786 0.670162 CAAGTCCCACACAAGCCAAG 59.330 55.000 0.00 0.00 0.00 3.61
786 787 0.754957 CCAAGTCCCACACAAGCCAA 60.755 55.000 0.00 0.00 0.00 4.52
787 788 1.152777 CCAAGTCCCACACAAGCCA 60.153 57.895 0.00 0.00 0.00 4.75
788 789 0.890996 CTCCAAGTCCCACACAAGCC 60.891 60.000 0.00 0.00 0.00 4.35
789 790 0.179018 ACTCCAAGTCCCACACAAGC 60.179 55.000 0.00 0.00 0.00 4.01
790 791 1.949525 CAACTCCAAGTCCCACACAAG 59.050 52.381 0.00 0.00 0.00 3.16
791 792 1.409521 CCAACTCCAAGTCCCACACAA 60.410 52.381 0.00 0.00 0.00 3.33
792 793 0.182537 CCAACTCCAAGTCCCACACA 59.817 55.000 0.00 0.00 0.00 3.72
793 794 0.472471 TCCAACTCCAAGTCCCACAC 59.528 55.000 0.00 0.00 0.00 3.82
794 795 1.142870 CTTCCAACTCCAAGTCCCACA 59.857 52.381 0.00 0.00 0.00 4.17
795 796 1.420138 TCTTCCAACTCCAAGTCCCAC 59.580 52.381 0.00 0.00 0.00 4.61
796 797 1.814429 TCTTCCAACTCCAAGTCCCA 58.186 50.000 0.00 0.00 0.00 4.37
797 798 2.951229 TTCTTCCAACTCCAAGTCCC 57.049 50.000 0.00 0.00 0.00 4.46
798 799 4.584743 ACAAATTCTTCCAACTCCAAGTCC 59.415 41.667 0.00 0.00 0.00 3.85
799 800 5.523369 CACAAATTCTTCCAACTCCAAGTC 58.477 41.667 0.00 0.00 0.00 3.01
800 801 4.202151 GCACAAATTCTTCCAACTCCAAGT 60.202 41.667 0.00 0.00 0.00 3.16
801 802 4.038402 AGCACAAATTCTTCCAACTCCAAG 59.962 41.667 0.00 0.00 0.00 3.61
802 803 3.960102 AGCACAAATTCTTCCAACTCCAA 59.040 39.130 0.00 0.00 0.00 3.53
803 804 3.565307 AGCACAAATTCTTCCAACTCCA 58.435 40.909 0.00 0.00 0.00 3.86
804 805 4.762251 AGTAGCACAAATTCTTCCAACTCC 59.238 41.667 0.00 0.00 0.00 3.85
805 806 5.335191 CCAGTAGCACAAATTCTTCCAACTC 60.335 44.000 0.00 0.00 0.00 3.01
806 807 4.520492 CCAGTAGCACAAATTCTTCCAACT 59.480 41.667 0.00 0.00 0.00 3.16
807 808 4.518970 TCCAGTAGCACAAATTCTTCCAAC 59.481 41.667 0.00 0.00 0.00 3.77
808 809 4.724399 TCCAGTAGCACAAATTCTTCCAA 58.276 39.130 0.00 0.00 0.00 3.53
809 810 4.365514 TCCAGTAGCACAAATTCTTCCA 57.634 40.909 0.00 0.00 0.00 3.53
810 811 4.518970 TGTTCCAGTAGCACAAATTCTTCC 59.481 41.667 0.00 0.00 0.00 3.46
811 812 5.008613 TGTGTTCCAGTAGCACAAATTCTTC 59.991 40.000 0.00 0.00 45.12 2.87
812 813 4.887071 TGTGTTCCAGTAGCACAAATTCTT 59.113 37.500 0.00 0.00 45.12 2.52
813 814 4.460263 TGTGTTCCAGTAGCACAAATTCT 58.540 39.130 0.00 0.00 45.12 2.40
814 815 4.829064 TGTGTTCCAGTAGCACAAATTC 57.171 40.909 0.00 0.00 45.12 2.17
820 821 2.472695 TCCATGTGTTCCAGTAGCAC 57.527 50.000 0.00 0.00 39.59 4.40
821 822 3.719268 ATTCCATGTGTTCCAGTAGCA 57.281 42.857 0.00 0.00 0.00 3.49
822 823 3.555956 CGTATTCCATGTGTTCCAGTAGC 59.444 47.826 0.00 0.00 0.00 3.58
823 824 4.755411 ACGTATTCCATGTGTTCCAGTAG 58.245 43.478 0.00 0.00 0.00 2.57
824 825 4.221041 TGACGTATTCCATGTGTTCCAGTA 59.779 41.667 0.00 0.00 0.00 2.74
825 826 3.007506 TGACGTATTCCATGTGTTCCAGT 59.992 43.478 0.00 0.00 0.00 4.00
826 827 3.595173 TGACGTATTCCATGTGTTCCAG 58.405 45.455 0.00 0.00 0.00 3.86
827 828 3.686916 TGACGTATTCCATGTGTTCCA 57.313 42.857 0.00 0.00 0.00 3.53
828 829 3.181510 GCTTGACGTATTCCATGTGTTCC 60.182 47.826 0.00 0.00 0.00 3.62
829 830 3.435327 TGCTTGACGTATTCCATGTGTTC 59.565 43.478 0.00 0.00 0.00 3.18
830 831 3.188460 GTGCTTGACGTATTCCATGTGTT 59.812 43.478 0.00 0.00 0.00 3.32
831 832 2.742053 GTGCTTGACGTATTCCATGTGT 59.258 45.455 0.00 0.00 0.00 3.72
832 833 2.741517 TGTGCTTGACGTATTCCATGTG 59.258 45.455 0.00 0.00 0.00 3.21
833 834 3.052455 TGTGCTTGACGTATTCCATGT 57.948 42.857 0.00 0.00 0.00 3.21
834 835 3.302675 CGATGTGCTTGACGTATTCCATG 60.303 47.826 0.00 0.00 0.00 3.66
835 836 2.866156 CGATGTGCTTGACGTATTCCAT 59.134 45.455 0.00 0.00 0.00 3.41
836 837 2.267426 CGATGTGCTTGACGTATTCCA 58.733 47.619 0.00 0.00 0.00 3.53
837 838 1.593006 CCGATGTGCTTGACGTATTCC 59.407 52.381 0.00 0.00 0.00 3.01
838 839 2.281762 GTCCGATGTGCTTGACGTATTC 59.718 50.000 0.00 0.00 0.00 1.75
839 840 2.268298 GTCCGATGTGCTTGACGTATT 58.732 47.619 0.00 0.00 0.00 1.89
840 841 1.203758 TGTCCGATGTGCTTGACGTAT 59.796 47.619 0.00 0.00 0.00 3.06
841 842 0.599060 TGTCCGATGTGCTTGACGTA 59.401 50.000 0.00 0.00 0.00 3.57
842 843 0.249699 TTGTCCGATGTGCTTGACGT 60.250 50.000 0.00 0.00 0.00 4.34
843 844 0.163788 GTTGTCCGATGTGCTTGACG 59.836 55.000 0.00 0.00 0.00 4.35
844 845 1.461127 GAGTTGTCCGATGTGCTTGAC 59.539 52.381 0.00 0.00 0.00 3.18
845 846 1.344438 AGAGTTGTCCGATGTGCTTGA 59.656 47.619 0.00 0.00 0.00 3.02
846 847 1.462283 CAGAGTTGTCCGATGTGCTTG 59.538 52.381 0.00 0.00 0.00 4.01
847 848 1.344438 TCAGAGTTGTCCGATGTGCTT 59.656 47.619 0.00 0.00 0.00 3.91
848 849 0.969149 TCAGAGTTGTCCGATGTGCT 59.031 50.000 0.00 0.00 0.00 4.40
849 850 1.795768 TTCAGAGTTGTCCGATGTGC 58.204 50.000 0.00 0.00 0.00 4.57
850 851 3.329386 ACATTCAGAGTTGTCCGATGTG 58.671 45.455 0.00 0.00 0.00 3.21
851 852 3.685139 ACATTCAGAGTTGTCCGATGT 57.315 42.857 0.00 0.00 0.00 3.06
852 853 5.049474 TCAAAACATTCAGAGTTGTCCGATG 60.049 40.000 0.00 0.00 0.00 3.84
853 854 5.063204 TCAAAACATTCAGAGTTGTCCGAT 58.937 37.500 0.00 0.00 0.00 4.18
854 855 4.447290 TCAAAACATTCAGAGTTGTCCGA 58.553 39.130 0.00 0.00 0.00 4.55
855 856 4.811555 TCAAAACATTCAGAGTTGTCCG 57.188 40.909 0.00 0.00 0.00 4.79
856 857 7.202526 TGAATTCAAAACATTCAGAGTTGTCC 58.797 34.615 5.45 0.00 36.03 4.02
960 961 1.348036 CGAGGAAGGGACAGAGGTTTT 59.652 52.381 0.00 0.00 0.00 2.43
1266 1286 4.488911 AGGAGGAGGCGCCAGGAT 62.489 66.667 31.54 11.63 40.02 3.24
1374 1394 1.447838 GAAGTGGAATGCGCGGAGA 60.448 57.895 8.83 0.00 0.00 3.71
1383 1403 2.584608 CGGCGGAGGAAGTGGAAT 59.415 61.111 0.00 0.00 0.00 3.01
1750 1770 1.372251 CCAGATTCGCCTCGATCCG 60.372 63.158 0.00 0.00 35.23 4.18
1863 1883 6.073548 GCGAGTTGAATGTTGAGATATTAGGG 60.074 42.308 0.00 0.00 0.00 3.53
1875 1895 1.865865 ACACGAGCGAGTTGAATGTT 58.134 45.000 0.00 0.00 0.00 2.71
1974 1994 6.629649 CGAAGAAGTAATTGTACGTTTTTGCA 59.370 34.615 0.00 0.00 35.20 4.08
2019 2039 2.425143 TCATCCCCAGCTCAACATTC 57.575 50.000 0.00 0.00 0.00 2.67
2412 2432 1.402852 GCATTGTCGCCTTCCTTTTCC 60.403 52.381 0.00 0.00 0.00 3.13
2553 2573 4.223144 TGTTGGCTACTATCCTATCTGCA 58.777 43.478 0.01 0.00 0.00 4.41
2621 2641 1.734465 GCCAACTCGATGTTCAAGGAG 59.266 52.381 0.00 0.00 36.63 3.69
2716 2736 0.189574 TCCCAAAGGGCAATCAACCA 59.810 50.000 0.00 0.00 43.94 3.67
2941 2961 4.438148 TCAACACTGACATCACGAAGAAA 58.562 39.130 0.00 0.00 0.00 2.52
3415 4114 1.527311 GGTCGTTTGTGCTCAGACTTC 59.473 52.381 7.70 1.46 32.86 3.01
3435 4134 0.841961 TTCAGGATGGAGCCATGGAG 59.158 55.000 18.40 0.00 36.70 3.86
3436 4135 1.297968 TTTCAGGATGGAGCCATGGA 58.702 50.000 18.40 0.00 36.70 3.41
3437 4136 1.753073 GTTTTCAGGATGGAGCCATGG 59.247 52.381 7.63 7.63 36.70 3.66
3438 4137 2.449464 TGTTTTCAGGATGGAGCCATG 58.551 47.619 6.76 0.00 36.70 3.66
3439 4138 2.827921 GTTGTTTTCAGGATGGAGCCAT 59.172 45.455 0.71 0.71 39.69 4.40
3440 4139 2.158475 AGTTGTTTTCAGGATGGAGCCA 60.158 45.455 0.00 0.00 36.16 4.75
3441 4140 2.489722 GAGTTGTTTTCAGGATGGAGCC 59.510 50.000 0.00 0.00 36.16 4.70
3442 4141 3.149196 TGAGTTGTTTTCAGGATGGAGC 58.851 45.455 0.00 0.00 36.16 4.70
3452 4151 6.070829 GCACTGTTTTGTTTGAGTTGTTTTC 58.929 36.000 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.