Multiple sequence alignment - TraesCS5B01G054900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G054900 chr5B 100.000 2429 0 0 1 2429 60790709 60788281 0.000000e+00 4486.0
1 TraesCS5B01G054900 chr5B 99.681 313 1 0 2117 2429 60781620 60781308 7.530000e-160 573.0
2 TraesCS5B01G054900 chr5B 99.357 311 2 0 2119 2429 311044891 311044581 4.530000e-157 564.0
3 TraesCS5B01G054900 chr5B 99.042 313 3 0 2117 2429 311051877 311051565 1.630000e-156 562.0
4 TraesCS5B01G054900 chr5B 92.638 163 7 2 250 407 60790296 60790134 1.880000e-56 230.0
5 TraesCS5B01G054900 chr5B 92.638 163 7 2 414 576 60790460 60790303 1.880000e-56 230.0
6 TraesCS5B01G054900 chr5D 91.389 1289 48 24 414 1679 57851732 57852980 0.000000e+00 1707.0
7 TraesCS5B01G054900 chr5D 97.852 419 6 1 1 416 57851483 57851901 0.000000e+00 721.0
8 TraesCS5B01G054900 chr5D 95.985 274 7 3 1681 1952 57853031 57853302 2.220000e-120 442.0
9 TraesCS5B01G054900 chr5D 96.552 174 6 0 1943 2116 57853479 57853652 3.060000e-74 289.0
10 TraesCS5B01G054900 chr5A 90.737 950 60 17 668 1597 45997596 45998537 0.000000e+00 1242.0
11 TraesCS5B01G054900 chr5A 87.075 441 26 16 1 417 45990073 45990506 1.020000e-128 470.0
12 TraesCS5B01G054900 chr5A 93.458 214 14 0 1902 2115 45999973 46000186 3.900000e-83 318.0
13 TraesCS5B01G054900 chr5A 90.612 245 12 5 1615 1851 45998667 45998908 5.040000e-82 315.0
14 TraesCS5B01G054900 chr5A 96.875 32 1 0 1636 1667 45998712 45998743 1.000000e-03 54.7
15 TraesCS5B01G054900 chr2B 89.589 682 48 9 993 1668 698591649 698590985 0.000000e+00 845.0
16 TraesCS5B01G054900 chr2A 98.722 313 4 0 2117 2429 19011331 19011643 7.590000e-155 556.0
17 TraesCS5B01G054900 chr2A 98.403 313 5 0 2117 2429 19018345 19018657 3.530000e-153 551.0
18 TraesCS5B01G054900 chr2A 98.083 313 6 0 2117 2429 20884019 20883707 1.640000e-151 545.0
19 TraesCS5B01G054900 chr2A 97.764 313 6 1 2117 2429 220419374 220419685 2.750000e-149 538.0
20 TraesCS5B01G054900 chr6A 98.408 314 4 1 2117 2429 613060376 613060063 3.530000e-153 551.0
21 TraesCS5B01G054900 chr6A 98.095 315 5 1 2116 2429 613067383 613067069 4.570000e-152 547.0
22 TraesCS5B01G054900 chr6A 80.786 229 43 1 1890 2117 599707572 599707344 6.900000e-41 178.0
23 TraesCS5B01G054900 chr3B 87.302 252 22 6 1416 1663 727504479 727504724 1.840000e-71 279.0
24 TraesCS5B01G054900 chr3B 84.141 227 34 2 1888 2114 177970957 177970733 4.070000e-53 219.0
25 TraesCS5B01G054900 chr3D 83.260 227 36 2 1888 2114 123911377 123911153 8.800000e-50 207.0
26 TraesCS5B01G054900 chr3D 81.739 230 36 5 1890 2116 571913184 571912958 1.150000e-43 187.0
27 TraesCS5B01G054900 chr6B 79.646 226 44 2 1888 2112 290585168 290584944 6.950000e-36 161.0
28 TraesCS5B01G054900 chr7D 83.333 174 28 1 1892 2064 245470699 245470872 2.500000e-35 159.0
29 TraesCS5B01G054900 chr2D 77.876 226 42 6 1901 2121 83832458 83832236 1.520000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G054900 chr5B 60788281 60790709 2428 True 1648.666667 4486 95.0920 1 2429 3 chr5B.!!$R4 2428
1 TraesCS5B01G054900 chr5D 57851483 57853652 2169 False 789.750000 1707 95.4445 1 2116 4 chr5D.!!$F1 2115
2 TraesCS5B01G054900 chr5A 45997596 46000186 2590 False 482.425000 1242 92.9205 668 2115 4 chr5A.!!$F2 1447
3 TraesCS5B01G054900 chr2B 698590985 698591649 664 True 845.000000 845 89.5890 993 1668 1 chr2B.!!$R1 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
553 557 0.32336 TGGTTATGTCCTTGGGCAGC 60.323 55.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 1746 0.316204 CTACACGGACGAACCCAAGT 59.684 55.0 0.0 0.0 34.64 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
294 295 1.284198 AGAGGATGCTCACTTTGCCAT 59.716 47.619 17.24 0.00 0.00 4.40
378 379 1.748950 ACGCATGCATGGTTATGTCA 58.251 45.000 27.34 0.00 36.65 3.58
388 392 4.357142 CATGGTTATGTCATTGAGCAAGC 58.643 43.478 0.00 0.00 0.00 4.01
416 420 1.265905 GTACCTGAAACCGGTTGCTTG 59.734 52.381 25.82 18.12 35.98 4.01
417 421 0.395173 ACCTGAAACCGGTTGCTTGT 60.395 50.000 25.82 18.75 0.00 3.16
418 422 1.134037 ACCTGAAACCGGTTGCTTGTA 60.134 47.619 25.82 4.83 0.00 2.41
419 423 1.265905 CCTGAAACCGGTTGCTTGTAC 59.734 52.381 25.82 9.78 0.00 2.90
420 424 1.265905 CTGAAACCGGTTGCTTGTACC 59.734 52.381 25.82 6.58 0.00 3.34
421 425 1.310904 GAAACCGGTTGCTTGTACCA 58.689 50.000 23.08 0.00 35.31 3.25
422 426 1.883926 GAAACCGGTTGCTTGTACCAT 59.116 47.619 23.08 0.00 35.31 3.55
423 427 1.530323 AACCGGTTGCTTGTACCATC 58.470 50.000 21.56 0.00 35.31 3.51
424 428 0.398696 ACCGGTTGCTTGTACCATCA 59.601 50.000 0.00 0.00 35.31 3.07
425 429 1.202830 ACCGGTTGCTTGTACCATCAA 60.203 47.619 0.00 0.00 35.31 2.57
426 430 1.468520 CCGGTTGCTTGTACCATCAAG 59.531 52.381 0.00 2.58 45.09 3.02
427 431 1.468520 CGGTTGCTTGTACCATCAAGG 59.531 52.381 8.22 0.00 43.26 3.61
428 432 2.790433 GGTTGCTTGTACCATCAAGGA 58.210 47.619 8.22 3.05 43.26 3.36
429 433 3.356290 GGTTGCTTGTACCATCAAGGAT 58.644 45.455 8.22 0.00 43.14 3.24
430 434 4.523083 GGTTGCTTGTACCATCAAGGATA 58.477 43.478 8.22 0.00 43.14 2.59
431 435 4.335594 GGTTGCTTGTACCATCAAGGATAC 59.664 45.833 8.22 6.63 43.14 2.24
432 436 5.861778 GGTTGCTTGTACCATCAAGGATACT 60.862 44.000 8.22 0.00 43.14 2.12
433 437 7.621811 GGTTGCTTGTACCATCAAGGATACTC 61.622 46.154 8.22 0.00 43.14 2.59
434 438 9.685979 GGTTGCTTGTACCATCAAGGATACTCT 62.686 44.444 8.22 0.00 43.14 3.24
449 453 5.918608 GGATACTCTGTAAAAGGATGCTCA 58.081 41.667 0.00 0.00 0.00 4.26
450 454 5.755861 GGATACTCTGTAAAAGGATGCTCAC 59.244 44.000 0.00 0.00 0.00 3.51
451 455 4.899352 ACTCTGTAAAAGGATGCTCACT 57.101 40.909 0.00 0.00 0.00 3.41
452 456 5.234466 ACTCTGTAAAAGGATGCTCACTT 57.766 39.130 0.00 0.00 0.00 3.16
453 457 5.625150 ACTCTGTAAAAGGATGCTCACTTT 58.375 37.500 0.00 0.00 38.48 2.66
454 458 5.471456 ACTCTGTAAAAGGATGCTCACTTTG 59.529 40.000 0.00 0.00 37.04 2.77
455 459 4.216257 TCTGTAAAAGGATGCTCACTTTGC 59.784 41.667 0.00 0.00 37.04 3.68
456 460 3.255642 TGTAAAAGGATGCTCACTTTGCC 59.744 43.478 0.00 0.00 37.04 4.52
457 461 1.999648 AAAGGATGCTCACTTTGCCA 58.000 45.000 0.00 0.00 35.72 4.92
458 462 2.226962 AAGGATGCTCACTTTGCCAT 57.773 45.000 0.00 0.00 0.00 4.40
459 463 1.760192 AGGATGCTCACTTTGCCATC 58.240 50.000 0.00 0.00 0.00 3.51
460 464 1.284198 AGGATGCTCACTTTGCCATCT 59.716 47.619 0.00 0.00 0.00 2.90
461 465 2.507058 AGGATGCTCACTTTGCCATCTA 59.493 45.455 0.00 0.00 0.00 1.98
462 466 2.615912 GGATGCTCACTTTGCCATCTAC 59.384 50.000 0.00 0.00 0.00 2.59
463 467 2.857186 TGCTCACTTTGCCATCTACA 57.143 45.000 0.00 0.00 0.00 2.74
464 468 3.354948 TGCTCACTTTGCCATCTACAT 57.645 42.857 0.00 0.00 0.00 2.29
465 469 4.486125 TGCTCACTTTGCCATCTACATA 57.514 40.909 0.00 0.00 0.00 2.29
466 470 5.039920 TGCTCACTTTGCCATCTACATAT 57.960 39.130 0.00 0.00 0.00 1.78
467 471 6.173427 TGCTCACTTTGCCATCTACATATA 57.827 37.500 0.00 0.00 0.00 0.86
468 472 6.226052 TGCTCACTTTGCCATCTACATATAG 58.774 40.000 0.00 0.00 0.00 1.31
469 473 5.121454 GCTCACTTTGCCATCTACATATAGC 59.879 44.000 0.00 0.00 0.00 2.97
470 474 6.425210 TCACTTTGCCATCTACATATAGCT 57.575 37.500 0.00 0.00 0.00 3.32
471 475 7.539034 TCACTTTGCCATCTACATATAGCTA 57.461 36.000 0.00 0.00 0.00 3.32
472 476 7.962441 TCACTTTGCCATCTACATATAGCTAA 58.038 34.615 0.00 0.00 0.00 3.09
473 477 8.090831 TCACTTTGCCATCTACATATAGCTAAG 58.909 37.037 0.00 0.00 38.47 2.18
474 478 6.876257 ACTTTGCCATCTACATATAGCTAAGC 59.124 38.462 0.00 0.00 36.83 3.09
475 479 6.611613 TTGCCATCTACATATAGCTAAGCT 57.388 37.500 0.00 0.00 43.41 3.74
476 480 5.970592 TGCCATCTACATATAGCTAAGCTG 58.029 41.667 0.00 0.00 40.10 4.24
477 481 5.481824 TGCCATCTACATATAGCTAAGCTGT 59.518 40.000 0.00 4.55 40.10 4.40
478 482 6.014242 TGCCATCTACATATAGCTAAGCTGTT 60.014 38.462 0.00 0.00 40.10 3.16
479 483 6.312426 GCCATCTACATATAGCTAAGCTGTTG 59.688 42.308 0.00 3.48 40.10 3.33
480 484 7.382110 CCATCTACATATAGCTAAGCTGTTGT 58.618 38.462 0.00 0.00 40.10 3.32
481 485 7.875041 CCATCTACATATAGCTAAGCTGTTGTT 59.125 37.037 0.00 0.00 40.10 2.83
482 486 8.920665 CATCTACATATAGCTAAGCTGTTGTTC 58.079 37.037 0.00 0.00 40.10 3.18
483 487 8.007405 TCTACATATAGCTAAGCTGTTGTTCA 57.993 34.615 0.00 0.00 40.10 3.18
484 488 8.138074 TCTACATATAGCTAAGCTGTTGTTCAG 58.862 37.037 0.00 0.00 46.12 3.02
485 489 6.644347 ACATATAGCTAAGCTGTTGTTCAGT 58.356 36.000 0.00 0.00 45.23 3.41
486 490 6.758886 ACATATAGCTAAGCTGTTGTTCAGTC 59.241 38.462 0.00 0.00 45.23 3.51
487 491 3.760580 AGCTAAGCTGTTGTTCAGTCT 57.239 42.857 0.00 0.00 45.23 3.24
488 492 4.873746 AGCTAAGCTGTTGTTCAGTCTA 57.126 40.909 0.00 0.00 45.23 2.59
489 493 5.413309 AGCTAAGCTGTTGTTCAGTCTAT 57.587 39.130 0.00 0.00 45.23 1.98
490 494 6.531503 AGCTAAGCTGTTGTTCAGTCTATA 57.468 37.500 0.00 0.00 45.23 1.31
491 495 7.118496 AGCTAAGCTGTTGTTCAGTCTATAT 57.882 36.000 0.00 0.00 45.23 0.86
492 496 7.206687 AGCTAAGCTGTTGTTCAGTCTATATC 58.793 38.462 0.00 0.00 45.23 1.63
493 497 7.069331 AGCTAAGCTGTTGTTCAGTCTATATCT 59.931 37.037 0.00 0.00 45.23 1.98
494 498 7.168972 GCTAAGCTGTTGTTCAGTCTATATCTG 59.831 40.741 0.00 0.00 45.23 2.90
495 499 5.355596 AGCTGTTGTTCAGTCTATATCTGC 58.644 41.667 0.00 0.00 45.23 4.26
496 500 5.105187 AGCTGTTGTTCAGTCTATATCTGCA 60.105 40.000 0.00 0.00 45.23 4.41
497 501 5.233902 GCTGTTGTTCAGTCTATATCTGCAG 59.766 44.000 7.63 7.63 45.23 4.41
498 502 6.286240 TGTTGTTCAGTCTATATCTGCAGT 57.714 37.500 14.67 3.75 33.48 4.40
499 503 7.404671 TGTTGTTCAGTCTATATCTGCAGTA 57.595 36.000 14.67 6.05 33.48 2.74
500 504 7.836842 TGTTGTTCAGTCTATATCTGCAGTAA 58.163 34.615 14.67 3.20 33.48 2.24
501 505 7.759886 TGTTGTTCAGTCTATATCTGCAGTAAC 59.240 37.037 14.67 4.44 33.48 2.50
502 506 7.404671 TGTTCAGTCTATATCTGCAGTAACA 57.595 36.000 14.67 7.10 33.48 2.41
503 507 8.011844 TGTTCAGTCTATATCTGCAGTAACAT 57.988 34.615 14.67 1.90 33.48 2.71
504 508 8.478066 TGTTCAGTCTATATCTGCAGTAACATT 58.522 33.333 14.67 0.00 33.48 2.71
505 509 9.319143 GTTCAGTCTATATCTGCAGTAACATTT 57.681 33.333 14.67 0.00 33.48 2.32
506 510 9.890629 TTCAGTCTATATCTGCAGTAACATTTT 57.109 29.630 14.67 0.00 33.48 1.82
507 511 9.534565 TCAGTCTATATCTGCAGTAACATTTTC 57.465 33.333 14.67 0.00 33.48 2.29
508 512 9.317936 CAGTCTATATCTGCAGTAACATTTTCA 57.682 33.333 14.67 0.00 0.00 2.69
511 515 9.836864 TCTATATCTGCAGTAACATTTTCATGT 57.163 29.630 14.67 0.00 46.34 3.21
513 517 6.822667 ATCTGCAGTAACATTTTCATGTCA 57.177 33.333 14.67 0.00 43.34 3.58
514 518 6.631971 TCTGCAGTAACATTTTCATGTCAA 57.368 33.333 14.67 0.00 43.34 3.18
515 519 7.218228 TCTGCAGTAACATTTTCATGTCAAT 57.782 32.000 14.67 0.00 43.34 2.57
516 520 7.085746 TCTGCAGTAACATTTTCATGTCAATG 58.914 34.615 14.67 14.38 43.34 2.82
517 521 5.634439 TGCAGTAACATTTTCATGTCAATGC 59.366 36.000 15.37 4.35 43.34 3.56
518 522 5.634439 GCAGTAACATTTTCATGTCAATGCA 59.366 36.000 15.37 0.00 43.34 3.96
519 523 6.400303 GCAGTAACATTTTCATGTCAATGCAC 60.400 38.462 15.37 13.64 43.34 4.57
520 524 6.864685 CAGTAACATTTTCATGTCAATGCACT 59.135 34.615 15.37 14.99 43.34 4.40
521 525 6.864685 AGTAACATTTTCATGTCAATGCACTG 59.135 34.615 15.37 0.00 43.34 3.66
522 526 5.204409 ACATTTTCATGTCAATGCACTGT 57.796 34.783 15.37 0.51 39.69 3.55
523 527 5.603596 ACATTTTCATGTCAATGCACTGTT 58.396 33.333 15.37 0.00 39.69 3.16
524 528 6.747125 ACATTTTCATGTCAATGCACTGTTA 58.253 32.000 15.37 0.00 39.69 2.41
525 529 7.208777 ACATTTTCATGTCAATGCACTGTTAA 58.791 30.769 15.37 0.00 39.69 2.01
526 530 7.169645 ACATTTTCATGTCAATGCACTGTTAAC 59.830 33.333 15.37 0.00 39.69 2.01
527 531 5.764487 TTCATGTCAATGCACTGTTAACA 57.236 34.783 8.28 8.28 33.47 2.41
528 532 5.107109 TCATGTCAATGCACTGTTAACAC 57.893 39.130 3.59 0.00 33.47 3.32
529 533 4.578105 TCATGTCAATGCACTGTTAACACA 59.422 37.500 3.59 1.76 33.47 3.72
530 534 5.241285 TCATGTCAATGCACTGTTAACACAT 59.759 36.000 3.59 4.29 33.47 3.21
531 535 4.857799 TGTCAATGCACTGTTAACACATG 58.142 39.130 3.59 7.43 30.39 3.21
532 536 3.670055 GTCAATGCACTGTTAACACATGC 59.330 43.478 24.04 24.04 37.67 4.06
533 537 3.317430 TCAATGCACTGTTAACACATGCA 59.683 39.130 30.61 30.61 44.40 3.96
535 539 3.285816 TGCACTGTTAACACATGCATG 57.714 42.857 27.37 25.09 39.98 4.06
536 540 2.030096 TGCACTGTTAACACATGCATGG 60.030 45.455 27.37 20.05 39.98 3.66
537 541 2.030007 GCACTGTTAACACATGCATGGT 60.030 45.455 29.41 20.67 37.37 3.55
538 542 3.552684 GCACTGTTAACACATGCATGGTT 60.553 43.478 29.41 27.49 37.37 3.67
539 543 4.320861 GCACTGTTAACACATGCATGGTTA 60.321 41.667 29.41 26.60 37.37 2.85
540 544 5.622007 GCACTGTTAACACATGCATGGTTAT 60.622 40.000 29.41 15.58 37.37 1.89
541 545 5.801444 CACTGTTAACACATGCATGGTTATG 59.199 40.000 29.41 20.28 32.94 1.90
542 546 5.476599 ACTGTTAACACATGCATGGTTATGT 59.523 36.000 29.41 20.92 37.99 2.29
543 547 5.948588 TGTTAACACATGCATGGTTATGTC 58.051 37.500 29.41 21.79 35.46 3.06
544 548 5.105957 TGTTAACACATGCATGGTTATGTCC 60.106 40.000 29.41 18.83 35.46 4.02
545 549 3.370840 ACACATGCATGGTTATGTCCT 57.629 42.857 29.41 3.16 35.46 3.85
546 550 3.700538 ACACATGCATGGTTATGTCCTT 58.299 40.909 29.41 2.39 35.46 3.36
547 551 3.444742 ACACATGCATGGTTATGTCCTTG 59.555 43.478 29.41 16.55 35.46 3.61
548 552 3.025978 ACATGCATGGTTATGTCCTTGG 58.974 45.455 29.41 0.42 36.65 3.61
549 553 2.142356 TGCATGGTTATGTCCTTGGG 57.858 50.000 0.00 0.00 36.65 4.12
550 554 0.746659 GCATGGTTATGTCCTTGGGC 59.253 55.000 0.00 0.00 36.65 5.36
551 555 1.959508 GCATGGTTATGTCCTTGGGCA 60.960 52.381 0.00 0.00 36.65 5.36
552 556 2.026641 CATGGTTATGTCCTTGGGCAG 58.973 52.381 0.00 0.00 0.00 4.85
553 557 0.323360 TGGTTATGTCCTTGGGCAGC 60.323 55.000 0.00 0.00 0.00 5.25
554 558 0.323360 GGTTATGTCCTTGGGCAGCA 60.323 55.000 0.00 0.00 0.00 4.41
555 559 1.544724 GTTATGTCCTTGGGCAGCAA 58.455 50.000 0.00 0.00 0.00 3.91
556 560 1.474077 GTTATGTCCTTGGGCAGCAAG 59.526 52.381 0.00 0.00 0.00 4.01
557 561 0.698238 TATGTCCTTGGGCAGCAAGT 59.302 50.000 0.00 0.00 0.00 3.16
558 562 0.896940 ATGTCCTTGGGCAGCAAGTG 60.897 55.000 0.00 0.00 0.00 3.16
559 563 2.115910 TCCTTGGGCAGCAAGTGG 59.884 61.111 0.00 0.00 0.00 4.00
570 574 3.021451 GCAAGTGGCTTGTGTACCT 57.979 52.632 10.10 0.00 42.77 3.08
571 575 0.593128 GCAAGTGGCTTGTGTACCTG 59.407 55.000 10.10 0.00 42.77 4.00
572 576 1.813862 GCAAGTGGCTTGTGTACCTGA 60.814 52.381 10.10 0.00 42.77 3.86
573 577 2.571212 CAAGTGGCTTGTGTACCTGAA 58.429 47.619 1.06 0.00 36.79 3.02
574 578 2.948979 CAAGTGGCTTGTGTACCTGAAA 59.051 45.455 1.06 0.00 36.79 2.69
575 579 2.572290 AGTGGCTTGTGTACCTGAAAC 58.428 47.619 0.00 0.00 0.00 2.78
576 580 1.263217 GTGGCTTGTGTACCTGAAACG 59.737 52.381 0.00 0.00 0.00 3.60
577 581 1.139256 TGGCTTGTGTACCTGAAACGA 59.861 47.619 0.00 0.00 0.00 3.85
578 582 1.798813 GGCTTGTGTACCTGAAACGAG 59.201 52.381 0.00 0.00 0.00 4.18
579 583 2.547218 GGCTTGTGTACCTGAAACGAGA 60.547 50.000 0.00 0.00 0.00 4.04
580 584 3.326747 GCTTGTGTACCTGAAACGAGAT 58.673 45.455 0.00 0.00 0.00 2.75
581 585 3.368236 GCTTGTGTACCTGAAACGAGATC 59.632 47.826 0.00 0.00 0.00 2.75
582 586 3.587797 TGTGTACCTGAAACGAGATCC 57.412 47.619 0.00 0.00 0.00 3.36
583 587 2.094906 TGTGTACCTGAAACGAGATCCG 60.095 50.000 0.00 2.55 45.44 4.18
584 588 1.475280 TGTACCTGAAACGAGATCCGG 59.525 52.381 0.00 0.00 43.93 5.14
585 589 1.475682 GTACCTGAAACGAGATCCGGT 59.524 52.381 0.00 0.00 43.93 5.28
591 595 2.840974 AACGAGATCCGGTTGCTTG 58.159 52.632 0.00 4.03 43.93 4.01
592 596 0.673644 AACGAGATCCGGTTGCTTGG 60.674 55.000 0.00 0.00 43.93 3.61
622 626 5.651139 AGAGCACTGCTTTTACATGATCATT 59.349 36.000 5.16 0.66 39.88 2.57
625 629 5.514204 GCACTGCTTTTACATGATCATTGTC 59.486 40.000 5.16 0.00 0.00 3.18
627 631 6.745907 CACTGCTTTTACATGATCATTGTCTG 59.254 38.462 5.16 0.00 0.00 3.51
628 632 6.432162 ACTGCTTTTACATGATCATTGTCTGT 59.568 34.615 5.16 4.73 0.00 3.41
632 640 7.695618 GCTTTTACATGATCATTGTCTGTTCTC 59.304 37.037 5.16 0.00 0.00 2.87
662 670 6.960468 GGTTATCTTAGCAACCAATCTTAGC 58.040 40.000 9.65 0.00 43.13 3.09
690 698 9.341899 CTTAATTAATCACCACTAAACACAAGC 57.658 33.333 0.00 0.00 0.00 4.01
751 759 0.973632 CAATGGATGATGGCCCCATG 59.026 55.000 10.83 3.03 40.31 3.66
772 780 2.037381 GCAGGTCAAGCCCTACCTATAC 59.963 54.545 1.46 0.00 44.43 1.47
781 789 2.756919 GCCCTACCTATACCTGCACTCT 60.757 54.545 0.00 0.00 0.00 3.24
964 983 1.627834 GATCAGATCATCCACCTCCCC 59.372 57.143 5.44 0.00 0.00 4.81
1148 1171 2.925170 AGAAGACAGCCAGGCGGT 60.925 61.111 18.20 18.20 40.02 5.68
1284 1310 1.735376 ATGGCGACGCGAGGAATAGT 61.735 55.000 15.93 0.00 0.00 2.12
1353 1379 1.738099 GTGGATGCTCGACAACGCT 60.738 57.895 0.00 0.00 39.58 5.07
1469 1507 7.710044 ATCGACTCGTCGGTTGATATATAGTAT 59.290 37.037 18.10 0.00 45.16 2.12
1472 1510 8.124586 ACTCGTCGGTTGATATATAGTATACG 57.875 38.462 0.00 0.00 0.00 3.06
1473 1511 7.976175 ACTCGTCGGTTGATATATAGTATACGA 59.024 37.037 0.00 0.00 33.91 3.43
1475 1513 8.972349 TCGTCGGTTGATATATAGTATACGATC 58.028 37.037 1.35 0.30 30.46 3.69
1476 1514 8.758715 CGTCGGTTGATATATAGTATACGATCA 58.241 37.037 1.35 10.54 0.00 2.92
1552 1592 7.293018 GGATTTGATTGATTCTTTTTGTGTGC 58.707 34.615 0.00 0.00 0.00 4.57
1600 1745 3.347216 GCGCCAATGGGAAGATACATAT 58.653 45.455 0.00 0.00 35.59 1.78
1601 1746 4.513442 GCGCCAATGGGAAGATACATATA 58.487 43.478 0.00 0.00 35.59 0.86
1613 1758 6.867293 GGAAGATACATATACTTGGGTTCGTC 59.133 42.308 0.00 0.00 0.00 4.20
1796 2011 7.399523 GTCGTGCTCCTAAAGTAAATTATGTG 58.600 38.462 0.00 0.00 0.00 3.21
1797 2012 7.064253 GTCGTGCTCCTAAAGTAAATTATGTGT 59.936 37.037 0.00 0.00 0.00 3.72
1822 2037 9.267084 GTATACTTCCATTCCATTTCTTCTCTC 57.733 37.037 0.00 0.00 0.00 3.20
1959 3379 2.179018 GTTGATGCGCGCAATGGT 59.821 55.556 39.68 22.82 0.00 3.55
2005 3425 2.937591 CGCAGCAAAACTTCATGACAT 58.062 42.857 0.00 0.00 0.00 3.06
2073 3493 2.676076 TCATGGATGACGTGCATATCG 58.324 47.619 0.86 0.00 36.66 2.92
2118 3538 4.530710 ATGAAATGAAGCATGCAAGTGT 57.469 36.364 21.98 0.00 0.00 3.55
2119 3539 4.325028 TGAAATGAAGCATGCAAGTGTT 57.675 36.364 21.98 4.39 0.00 3.32
2120 3540 4.052608 TGAAATGAAGCATGCAAGTGTTG 58.947 39.130 21.98 0.00 0.00 3.33
2121 3541 2.736144 ATGAAGCATGCAAGTGTTGG 57.264 45.000 21.98 0.00 0.00 3.77
2122 3542 1.689984 TGAAGCATGCAAGTGTTGGA 58.310 45.000 21.98 0.00 34.77 3.53
2123 3543 2.030371 TGAAGCATGCAAGTGTTGGAA 58.970 42.857 21.98 0.00 33.68 3.53
2124 3544 2.429971 TGAAGCATGCAAGTGTTGGAAA 59.570 40.909 21.98 0.00 33.68 3.13
2125 3545 3.069872 TGAAGCATGCAAGTGTTGGAAAT 59.930 39.130 21.98 0.00 33.68 2.17
2126 3546 4.280425 TGAAGCATGCAAGTGTTGGAAATA 59.720 37.500 21.98 0.00 33.68 1.40
2127 3547 5.047164 TGAAGCATGCAAGTGTTGGAAATAT 60.047 36.000 21.98 0.00 33.68 1.28
2128 3548 4.751060 AGCATGCAAGTGTTGGAAATATG 58.249 39.130 21.98 0.00 33.68 1.78
2129 3549 3.307782 GCATGCAAGTGTTGGAAATATGC 59.692 43.478 14.21 0.00 33.68 3.14
2130 3550 3.591196 TGCAAGTGTTGGAAATATGCC 57.409 42.857 0.00 0.00 0.00 4.40
2131 3551 2.233431 TGCAAGTGTTGGAAATATGCCC 59.767 45.455 0.00 0.00 0.00 5.36
2132 3552 2.497273 GCAAGTGTTGGAAATATGCCCT 59.503 45.455 0.00 0.00 0.00 5.19
2133 3553 3.699038 GCAAGTGTTGGAAATATGCCCTA 59.301 43.478 0.00 0.00 0.00 3.53
2134 3554 4.202050 GCAAGTGTTGGAAATATGCCCTAG 60.202 45.833 0.00 0.00 0.00 3.02
2135 3555 5.192927 CAAGTGTTGGAAATATGCCCTAGA 58.807 41.667 0.00 0.00 0.00 2.43
2136 3556 5.041191 AGTGTTGGAAATATGCCCTAGAG 57.959 43.478 0.00 0.00 0.00 2.43
2137 3557 4.137543 GTGTTGGAAATATGCCCTAGAGG 58.862 47.826 0.00 0.00 39.47 3.69
2155 3575 9.981460 CCCTAGAGGCAATAATAAAAGGATTAT 57.019 33.333 0.00 0.00 34.18 1.28
2194 3614 9.955208 TTCATGATAATTGTCTATTGTTCATGC 57.045 29.630 18.84 0.00 41.74 4.06
2195 3615 9.346005 TCATGATAATTGTCTATTGTTCATGCT 57.654 29.630 18.84 0.00 41.74 3.79
2211 3631 7.860613 TGTTCATGCTATAATTGTATTGTCCG 58.139 34.615 0.00 0.00 0.00 4.79
2212 3632 7.041440 TGTTCATGCTATAATTGTATTGTCCGG 60.041 37.037 0.00 0.00 0.00 5.14
2213 3633 6.764379 TCATGCTATAATTGTATTGTCCGGA 58.236 36.000 0.00 0.00 0.00 5.14
2214 3634 7.220740 TCATGCTATAATTGTATTGTCCGGAA 58.779 34.615 5.23 0.00 0.00 4.30
2215 3635 7.717436 TCATGCTATAATTGTATTGTCCGGAAA 59.283 33.333 5.23 0.00 0.00 3.13
2216 3636 8.514594 CATGCTATAATTGTATTGTCCGGAAAT 58.485 33.333 5.23 11.20 0.00 2.17
2217 3637 8.094798 TGCTATAATTGTATTGTCCGGAAATC 57.905 34.615 5.23 0.00 0.00 2.17
2218 3638 7.717436 TGCTATAATTGTATTGTCCGGAAATCA 59.283 33.333 5.23 0.00 0.00 2.57
2219 3639 8.730680 GCTATAATTGTATTGTCCGGAAATCAT 58.269 33.333 5.23 0.00 0.00 2.45
2225 3645 8.966069 TTGTATTGTCCGGAAATCATAATACA 57.034 30.769 5.23 16.25 37.60 2.29
2226 3646 9.567776 TTGTATTGTCCGGAAATCATAATACAT 57.432 29.630 22.25 5.96 38.52 2.29
2227 3647 8.998377 TGTATTGTCCGGAAATCATAATACATG 58.002 33.333 5.23 0.00 35.70 3.21
2228 3648 8.999431 GTATTGTCCGGAAATCATAATACATGT 58.001 33.333 5.23 2.69 32.60 3.21
2229 3649 6.859420 TGTCCGGAAATCATAATACATGTG 57.141 37.500 5.23 0.00 0.00 3.21
2230 3650 6.353323 TGTCCGGAAATCATAATACATGTGT 58.647 36.000 5.23 0.00 0.00 3.72
2231 3651 6.259829 TGTCCGGAAATCATAATACATGTGTG 59.740 38.462 5.23 2.44 0.00 3.82
2232 3652 6.481976 GTCCGGAAATCATAATACATGTGTGA 59.518 38.462 5.23 7.95 0.00 3.58
2233 3653 7.011950 GTCCGGAAATCATAATACATGTGTGAA 59.988 37.037 5.23 0.00 0.00 3.18
2234 3654 7.719193 TCCGGAAATCATAATACATGTGTGAAT 59.281 33.333 9.11 0.00 0.00 2.57
2235 3655 8.998377 CCGGAAATCATAATACATGTGTGAATA 58.002 33.333 9.11 0.00 0.00 1.75
2236 3656 9.811655 CGGAAATCATAATACATGTGTGAATAC 57.188 33.333 9.11 2.18 0.00 1.89
2245 3665 8.662781 AATACATGTGTGAATACATAGACCAC 57.337 34.615 9.11 0.00 39.17 4.16
2246 3666 6.048732 ACATGTGTGAATACATAGACCACA 57.951 37.500 0.00 0.00 39.17 4.17
2247 3667 6.472016 ACATGTGTGAATACATAGACCACAA 58.528 36.000 0.00 0.00 39.17 3.33
2248 3668 7.112122 ACATGTGTGAATACATAGACCACAAT 58.888 34.615 0.00 0.00 39.17 2.71
2249 3669 8.264347 ACATGTGTGAATACATAGACCACAATA 58.736 33.333 0.00 0.00 39.17 1.90
2250 3670 9.276590 CATGTGTGAATACATAGACCACAATAT 57.723 33.333 0.00 0.00 39.17 1.28
2251 3671 8.661352 TGTGTGAATACATAGACCACAATATG 57.339 34.615 0.00 0.00 39.13 1.78
2252 3672 8.264347 TGTGTGAATACATAGACCACAATATGT 58.736 33.333 0.00 3.60 43.31 2.29
2253 3673 8.765219 GTGTGAATACATAGACCACAATATGTC 58.235 37.037 0.00 0.00 40.78 3.06
2254 3674 7.931407 TGTGAATACATAGACCACAATATGTCC 59.069 37.037 1.37 0.00 40.78 4.02
2255 3675 7.387948 GTGAATACATAGACCACAATATGTCCC 59.612 40.741 1.37 0.00 40.78 4.46
2256 3676 7.292356 TGAATACATAGACCACAATATGTCCCT 59.708 37.037 1.37 0.00 40.78 4.20
2257 3677 8.736097 AATACATAGACCACAATATGTCCCTA 57.264 34.615 1.37 0.00 40.78 3.53
2258 3678 6.672266 ACATAGACCACAATATGTCCCTAG 57.328 41.667 0.00 0.00 37.98 3.02
2259 3679 6.143915 ACATAGACCACAATATGTCCCTAGT 58.856 40.000 0.00 0.00 37.98 2.57
2260 3680 7.302948 ACATAGACCACAATATGTCCCTAGTA 58.697 38.462 0.00 0.00 37.98 1.82
2261 3681 7.787904 ACATAGACCACAATATGTCCCTAGTAA 59.212 37.037 0.00 0.00 37.98 2.24
2262 3682 6.732896 AGACCACAATATGTCCCTAGTAAG 57.267 41.667 0.00 0.00 31.76 2.34
2263 3683 5.070580 AGACCACAATATGTCCCTAGTAAGC 59.929 44.000 0.00 0.00 31.76 3.09
2264 3684 4.102681 ACCACAATATGTCCCTAGTAAGCC 59.897 45.833 0.00 0.00 0.00 4.35
2265 3685 4.348168 CCACAATATGTCCCTAGTAAGCCT 59.652 45.833 0.00 0.00 0.00 4.58
2266 3686 5.511545 CCACAATATGTCCCTAGTAAGCCTC 60.512 48.000 0.00 0.00 0.00 4.70
2267 3687 5.305644 CACAATATGTCCCTAGTAAGCCTCT 59.694 44.000 0.00 0.00 0.00 3.69
2268 3688 6.493802 CACAATATGTCCCTAGTAAGCCTCTA 59.506 42.308 0.00 0.00 0.00 2.43
2269 3689 6.722129 ACAATATGTCCCTAGTAAGCCTCTAG 59.278 42.308 0.00 0.00 35.86 2.43
2270 3690 4.817874 ATGTCCCTAGTAAGCCTCTAGT 57.182 45.455 0.00 0.00 34.72 2.57
2271 3691 4.604784 TGTCCCTAGTAAGCCTCTAGTT 57.395 45.455 0.00 0.00 34.72 2.24
2272 3692 4.279145 TGTCCCTAGTAAGCCTCTAGTTG 58.721 47.826 0.00 0.00 34.72 3.16
2273 3693 4.017775 TGTCCCTAGTAAGCCTCTAGTTGA 60.018 45.833 0.00 1.98 34.72 3.18
2274 3694 4.338964 GTCCCTAGTAAGCCTCTAGTTGAC 59.661 50.000 0.00 8.18 34.72 3.18
2275 3695 4.230041 TCCCTAGTAAGCCTCTAGTTGACT 59.770 45.833 0.00 0.00 34.72 3.41
2276 3696 5.431073 TCCCTAGTAAGCCTCTAGTTGACTA 59.569 44.000 0.00 0.00 34.72 2.59
2277 3697 5.766174 CCCTAGTAAGCCTCTAGTTGACTAG 59.234 48.000 11.14 11.14 45.57 2.57
2278 3698 5.239963 CCTAGTAAGCCTCTAGTTGACTAGC 59.760 48.000 12.30 3.61 44.24 3.42
2279 3699 4.862371 AGTAAGCCTCTAGTTGACTAGCT 58.138 43.478 12.30 5.64 44.24 3.32
2280 3700 4.885325 AGTAAGCCTCTAGTTGACTAGCTC 59.115 45.833 12.30 5.16 44.24 4.09
2281 3701 2.294074 AGCCTCTAGTTGACTAGCTCG 58.706 52.381 12.30 0.00 44.24 5.03
2282 3702 2.018515 GCCTCTAGTTGACTAGCTCGT 58.981 52.381 12.30 0.00 44.24 4.18
2283 3703 2.424246 GCCTCTAGTTGACTAGCTCGTT 59.576 50.000 12.30 0.00 44.24 3.85
2284 3704 3.732471 GCCTCTAGTTGACTAGCTCGTTG 60.732 52.174 12.30 0.75 44.24 4.10
2285 3705 3.690139 CCTCTAGTTGACTAGCTCGTTGA 59.310 47.826 12.30 0.00 44.24 3.18
2286 3706 4.336993 CCTCTAGTTGACTAGCTCGTTGAT 59.663 45.833 12.30 0.00 44.24 2.57
2287 3707 5.487153 TCTAGTTGACTAGCTCGTTGATC 57.513 43.478 12.30 0.00 44.24 2.92
2288 3708 4.941873 TCTAGTTGACTAGCTCGTTGATCA 59.058 41.667 12.30 0.00 44.24 2.92
2289 3709 4.521130 AGTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
2290 3710 5.078411 AGTTGACTAGCTCGTTGATCAAT 57.922 39.130 12.12 0.00 0.00 2.57
2291 3711 6.208988 AGTTGACTAGCTCGTTGATCAATA 57.791 37.500 12.12 2.38 0.00 1.90
2292 3712 6.269315 AGTTGACTAGCTCGTTGATCAATAG 58.731 40.000 12.12 13.07 0.00 1.73
2293 3713 6.095580 AGTTGACTAGCTCGTTGATCAATAGA 59.904 38.462 19.51 16.55 0.00 1.98
2294 3714 6.641169 TGACTAGCTCGTTGATCAATAGAT 57.359 37.500 19.51 16.66 37.13 1.98
2295 3715 7.745620 TGACTAGCTCGTTGATCAATAGATA 57.254 36.000 19.51 16.84 33.72 1.98
2296 3716 7.811653 TGACTAGCTCGTTGATCAATAGATAG 58.188 38.462 27.46 27.46 34.33 2.08
2297 3717 7.445707 TGACTAGCTCGTTGATCAATAGATAGT 59.554 37.037 31.17 31.17 39.18 2.12
2298 3718 7.812648 ACTAGCTCGTTGATCAATAGATAGTC 58.187 38.462 28.30 15.07 35.44 2.59
2299 3719 6.641169 AGCTCGTTGATCAATAGATAGTCA 57.359 37.500 19.51 0.00 33.72 3.41
2300 3720 7.225784 AGCTCGTTGATCAATAGATAGTCAT 57.774 36.000 19.51 2.79 33.72 3.06
2301 3721 7.089538 AGCTCGTTGATCAATAGATAGTCATG 58.910 38.462 19.51 8.11 33.72 3.07
2302 3722 6.309980 GCTCGTTGATCAATAGATAGTCATGG 59.690 42.308 19.51 7.58 33.72 3.66
2303 3723 7.290110 TCGTTGATCAATAGATAGTCATGGT 57.710 36.000 12.12 0.00 33.72 3.55
2304 3724 7.726216 TCGTTGATCAATAGATAGTCATGGTT 58.274 34.615 12.12 0.00 33.72 3.67
2305 3725 8.204160 TCGTTGATCAATAGATAGTCATGGTTT 58.796 33.333 12.12 0.00 33.72 3.27
2306 3726 8.491152 CGTTGATCAATAGATAGTCATGGTTTC 58.509 37.037 12.12 0.00 33.72 2.78
2307 3727 8.778358 GTTGATCAATAGATAGTCATGGTTTCC 58.222 37.037 12.12 0.00 33.72 3.13
2308 3728 8.267620 TGATCAATAGATAGTCATGGTTTCCT 57.732 34.615 0.00 0.00 33.72 3.36
2309 3729 8.152898 TGATCAATAGATAGTCATGGTTTCCTG 58.847 37.037 0.00 0.00 33.72 3.86
2310 3730 7.675161 TCAATAGATAGTCATGGTTTCCTGA 57.325 36.000 0.00 0.00 0.00 3.86
2311 3731 7.500992 TCAATAGATAGTCATGGTTTCCTGAC 58.499 38.462 0.00 8.96 41.65 3.51
2317 3737 4.487714 GTCATGGTTTCCTGACTATGGA 57.512 45.455 0.00 0.00 38.56 3.41
2318 3738 4.192317 GTCATGGTTTCCTGACTATGGAC 58.808 47.826 0.00 0.00 38.56 4.02
2319 3739 3.843619 TCATGGTTTCCTGACTATGGACA 59.156 43.478 0.00 0.00 38.56 4.02
2320 3740 4.474651 TCATGGTTTCCTGACTATGGACAT 59.525 41.667 0.00 0.00 38.56 3.06
2321 3741 4.220693 TGGTTTCCTGACTATGGACATG 57.779 45.455 0.00 0.00 32.65 3.21
2322 3742 3.054434 TGGTTTCCTGACTATGGACATGG 60.054 47.826 0.00 0.00 32.65 3.66
2323 3743 3.545703 GTTTCCTGACTATGGACATGGG 58.454 50.000 0.00 0.00 32.65 4.00
2324 3744 1.806496 TCCTGACTATGGACATGGGG 58.194 55.000 0.00 0.00 0.00 4.96
2325 3745 1.293763 TCCTGACTATGGACATGGGGA 59.706 52.381 0.00 0.00 0.00 4.81
2326 3746 2.089982 TCCTGACTATGGACATGGGGAT 60.090 50.000 0.00 0.00 0.00 3.85
2327 3747 2.039480 CCTGACTATGGACATGGGGATG 59.961 54.545 0.00 0.00 0.00 3.51
2328 3748 2.707791 CTGACTATGGACATGGGGATGT 59.292 50.000 0.00 0.00 37.50 3.06
2339 3759 4.136796 ACATGGGGATGTCATTGATAACG 58.863 43.478 0.00 0.00 0.00 3.18
2340 3760 3.207265 TGGGGATGTCATTGATAACGG 57.793 47.619 0.00 0.00 0.00 4.44
2341 3761 2.158682 TGGGGATGTCATTGATAACGGG 60.159 50.000 0.00 0.00 0.00 5.28
2342 3762 2.105821 GGGGATGTCATTGATAACGGGA 59.894 50.000 0.00 0.00 0.00 5.14
2343 3763 3.244911 GGGGATGTCATTGATAACGGGAT 60.245 47.826 0.00 0.00 0.00 3.85
2344 3764 4.003648 GGGATGTCATTGATAACGGGATC 58.996 47.826 0.00 0.00 0.00 3.36
2345 3765 4.504864 GGGATGTCATTGATAACGGGATCA 60.505 45.833 0.00 0.00 33.96 2.92
2346 3766 4.452455 GGATGTCATTGATAACGGGATCAC 59.548 45.833 0.00 0.00 35.56 3.06
2347 3767 4.479786 TGTCATTGATAACGGGATCACA 57.520 40.909 0.00 0.00 35.56 3.58
2348 3768 5.034852 TGTCATTGATAACGGGATCACAT 57.965 39.130 0.00 0.00 35.56 3.21
2349 3769 5.056480 TGTCATTGATAACGGGATCACATC 58.944 41.667 0.00 0.00 35.56 3.06
2350 3770 5.056480 GTCATTGATAACGGGATCACATCA 58.944 41.667 0.00 0.00 35.56 3.07
2351 3771 5.702670 GTCATTGATAACGGGATCACATCAT 59.297 40.000 0.00 0.00 35.56 2.45
2352 3772 6.205464 GTCATTGATAACGGGATCACATCATT 59.795 38.462 0.00 0.00 35.56 2.57
2353 3773 7.387673 GTCATTGATAACGGGATCACATCATTA 59.612 37.037 0.00 0.00 35.56 1.90
2354 3774 7.603784 TCATTGATAACGGGATCACATCATTAG 59.396 37.037 0.00 0.00 35.56 1.73
2355 3775 5.793817 TGATAACGGGATCACATCATTAGG 58.206 41.667 0.00 0.00 30.75 2.69
2356 3776 5.542251 TGATAACGGGATCACATCATTAGGA 59.458 40.000 0.00 0.00 30.75 2.94
2357 3777 4.342862 AACGGGATCACATCATTAGGAG 57.657 45.455 0.00 0.00 0.00 3.69
2358 3778 3.576861 ACGGGATCACATCATTAGGAGA 58.423 45.455 0.00 0.00 0.00 3.71
2359 3779 3.967326 ACGGGATCACATCATTAGGAGAA 59.033 43.478 0.00 0.00 0.00 2.87
2360 3780 4.594920 ACGGGATCACATCATTAGGAGAAT 59.405 41.667 0.00 0.00 0.00 2.40
2361 3781 4.934001 CGGGATCACATCATTAGGAGAATG 59.066 45.833 0.00 0.00 0.00 2.67
2362 3782 5.279657 CGGGATCACATCATTAGGAGAATGA 60.280 44.000 0.00 2.66 40.50 2.57
2363 3783 6.575847 CGGGATCACATCATTAGGAGAATGAT 60.576 42.308 6.90 6.90 45.40 2.45
2371 3791 6.752285 TCATTAGGAGAATGATGTGATGGA 57.248 37.500 0.00 0.00 32.21 3.41
2372 3792 6.528321 TCATTAGGAGAATGATGTGATGGAC 58.472 40.000 0.00 0.00 32.21 4.02
2373 3793 5.955961 TTAGGAGAATGATGTGATGGACA 57.044 39.130 0.00 0.00 39.53 4.02
2374 3794 4.849813 AGGAGAATGATGTGATGGACAA 57.150 40.909 0.00 0.00 38.36 3.18
2375 3795 4.778579 AGGAGAATGATGTGATGGACAAG 58.221 43.478 0.00 0.00 38.36 3.16
2376 3796 4.472470 AGGAGAATGATGTGATGGACAAGA 59.528 41.667 0.00 0.00 38.36 3.02
2377 3797 4.574013 GGAGAATGATGTGATGGACAAGAC 59.426 45.833 0.00 0.00 38.36 3.01
2378 3798 4.521146 AGAATGATGTGATGGACAAGACC 58.479 43.478 0.00 0.00 38.36 3.85
2379 3799 2.787473 TGATGTGATGGACAAGACCC 57.213 50.000 0.00 0.00 38.36 4.46
2380 3800 1.984424 TGATGTGATGGACAAGACCCA 59.016 47.619 0.00 0.00 38.36 4.51
2381 3801 2.374839 TGATGTGATGGACAAGACCCAA 59.625 45.455 0.00 0.00 38.36 4.12
2382 3802 3.181435 TGATGTGATGGACAAGACCCAAA 60.181 43.478 0.00 0.00 38.36 3.28
2383 3803 2.582052 TGTGATGGACAAGACCCAAAC 58.418 47.619 0.00 0.00 37.22 2.93
2384 3804 1.886542 GTGATGGACAAGACCCAAACC 59.113 52.381 0.00 0.00 37.22 3.27
2385 3805 1.780309 TGATGGACAAGACCCAAACCT 59.220 47.619 0.00 0.00 37.22 3.50
2386 3806 2.983192 TGATGGACAAGACCCAAACCTA 59.017 45.455 0.00 0.00 37.22 3.08
2387 3807 3.396276 TGATGGACAAGACCCAAACCTAA 59.604 43.478 0.00 0.00 37.22 2.69
2388 3808 3.502123 TGGACAAGACCCAAACCTAAG 57.498 47.619 0.00 0.00 0.00 2.18
2389 3809 2.160205 GGACAAGACCCAAACCTAAGC 58.840 52.381 0.00 0.00 0.00 3.09
2390 3810 2.488347 GGACAAGACCCAAACCTAAGCA 60.488 50.000 0.00 0.00 0.00 3.91
2391 3811 3.421844 GACAAGACCCAAACCTAAGCAT 58.578 45.455 0.00 0.00 0.00 3.79
2392 3812 4.566907 GGACAAGACCCAAACCTAAGCATA 60.567 45.833 0.00 0.00 0.00 3.14
2393 3813 4.589908 ACAAGACCCAAACCTAAGCATAG 58.410 43.478 0.00 0.00 0.00 2.23
2394 3814 3.283259 AGACCCAAACCTAAGCATAGC 57.717 47.619 0.00 0.00 0.00 2.97
2395 3815 2.576191 AGACCCAAACCTAAGCATAGCA 59.424 45.455 0.00 0.00 0.00 3.49
2396 3816 2.683362 GACCCAAACCTAAGCATAGCAC 59.317 50.000 0.00 0.00 0.00 4.40
2397 3817 2.041081 ACCCAAACCTAAGCATAGCACA 59.959 45.455 0.00 0.00 0.00 4.57
2398 3818 3.088532 CCCAAACCTAAGCATAGCACAA 58.911 45.455 0.00 0.00 0.00 3.33
2399 3819 3.509575 CCCAAACCTAAGCATAGCACAAA 59.490 43.478 0.00 0.00 0.00 2.83
2400 3820 4.380867 CCCAAACCTAAGCATAGCACAAAG 60.381 45.833 0.00 0.00 0.00 2.77
2401 3821 4.458989 CCAAACCTAAGCATAGCACAAAGA 59.541 41.667 0.00 0.00 0.00 2.52
2402 3822 5.126061 CCAAACCTAAGCATAGCACAAAGAT 59.874 40.000 0.00 0.00 0.00 2.40
2403 3823 6.261118 CAAACCTAAGCATAGCACAAAGATC 58.739 40.000 0.00 0.00 0.00 2.75
2404 3824 4.122776 ACCTAAGCATAGCACAAAGATCG 58.877 43.478 0.00 0.00 0.00 3.69
2405 3825 4.122776 CCTAAGCATAGCACAAAGATCGT 58.877 43.478 0.00 0.00 0.00 3.73
2406 3826 4.025396 CCTAAGCATAGCACAAAGATCGTG 60.025 45.833 0.00 0.00 37.43 4.35
2407 3827 2.977914 AGCATAGCACAAAGATCGTGT 58.022 42.857 0.00 0.00 36.71 4.49
2408 3828 4.123497 AGCATAGCACAAAGATCGTGTA 57.877 40.909 4.96 0.00 36.71 2.90
2409 3829 4.115516 AGCATAGCACAAAGATCGTGTAG 58.884 43.478 4.96 2.56 36.71 2.74
2410 3830 3.865745 GCATAGCACAAAGATCGTGTAGT 59.134 43.478 4.96 0.00 36.71 2.73
2411 3831 4.330074 GCATAGCACAAAGATCGTGTAGTT 59.670 41.667 4.96 2.32 36.71 2.24
2412 3832 5.500931 GCATAGCACAAAGATCGTGTAGTTC 60.501 44.000 4.96 0.00 36.71 3.01
2413 3833 2.987149 AGCACAAAGATCGTGTAGTTCG 59.013 45.455 4.96 0.00 36.71 3.95
2414 3834 2.729882 GCACAAAGATCGTGTAGTTCGT 59.270 45.455 4.96 0.00 36.71 3.85
2415 3835 3.183775 GCACAAAGATCGTGTAGTTCGTT 59.816 43.478 4.96 0.00 36.71 3.85
2416 3836 4.318546 GCACAAAGATCGTGTAGTTCGTTT 60.319 41.667 4.96 0.00 36.71 3.60
2417 3837 5.130519 CACAAAGATCGTGTAGTTCGTTTG 58.869 41.667 4.96 1.02 0.00 2.93
2418 3838 4.141680 CAAAGATCGTGTAGTTCGTTTGC 58.858 43.478 0.00 0.00 0.00 3.68
2419 3839 3.299340 AGATCGTGTAGTTCGTTTGCT 57.701 42.857 0.00 0.00 0.00 3.91
2420 3840 4.430137 AGATCGTGTAGTTCGTTTGCTA 57.570 40.909 0.00 0.00 0.00 3.49
2421 3841 4.413087 AGATCGTGTAGTTCGTTTGCTAG 58.587 43.478 0.00 0.00 0.00 3.42
2422 3842 3.902261 TCGTGTAGTTCGTTTGCTAGA 57.098 42.857 0.00 0.00 0.00 2.43
2423 3843 3.818387 TCGTGTAGTTCGTTTGCTAGAG 58.182 45.455 0.00 0.00 0.00 2.43
2424 3844 2.341760 CGTGTAGTTCGTTTGCTAGAGC 59.658 50.000 0.00 0.00 42.50 4.09
2425 3845 3.576648 GTGTAGTTCGTTTGCTAGAGCT 58.423 45.455 2.72 0.00 42.66 4.09
2426 3846 3.988517 GTGTAGTTCGTTTGCTAGAGCTT 59.011 43.478 2.72 0.00 42.66 3.74
2427 3847 4.448060 GTGTAGTTCGTTTGCTAGAGCTTT 59.552 41.667 2.72 0.00 42.66 3.51
2428 3848 5.050295 GTGTAGTTCGTTTGCTAGAGCTTTT 60.050 40.000 2.72 0.00 42.66 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
275 276 1.674962 GATGGCAAAGTGAGCATCCTC 59.325 52.381 0.00 0.00 38.62 3.71
326 327 6.311935 GCATTGACATGAAAATGTTACTGCAT 59.688 34.615 19.28 0.00 42.26 3.96
388 392 0.872388 GGTTTCAGGTACACAAGCCG 59.128 55.000 0.00 0.00 0.00 5.52
416 420 7.711339 CCTTTTACAGAGTATCCTTGATGGTAC 59.289 40.741 0.00 0.00 37.07 3.34
417 421 7.622081 TCCTTTTACAGAGTATCCTTGATGGTA 59.378 37.037 0.00 0.00 37.07 3.25
418 422 6.443849 TCCTTTTACAGAGTATCCTTGATGGT 59.556 38.462 0.00 0.00 37.07 3.55
419 423 6.889198 TCCTTTTACAGAGTATCCTTGATGG 58.111 40.000 0.00 0.00 33.66 3.51
420 424 7.041508 GCATCCTTTTACAGAGTATCCTTGATG 60.042 40.741 0.00 0.00 33.66 3.07
421 425 6.995091 GCATCCTTTTACAGAGTATCCTTGAT 59.005 38.462 0.00 0.00 33.66 2.57
422 426 6.156949 AGCATCCTTTTACAGAGTATCCTTGA 59.843 38.462 0.00 0.00 33.66 3.02
423 427 6.352516 AGCATCCTTTTACAGAGTATCCTTG 58.647 40.000 0.00 0.00 33.66 3.61
424 428 6.156949 TGAGCATCCTTTTACAGAGTATCCTT 59.843 38.462 0.00 0.00 33.66 3.36
425 429 5.663106 TGAGCATCCTTTTACAGAGTATCCT 59.337 40.000 0.00 0.00 33.66 3.24
426 430 5.755861 GTGAGCATCCTTTTACAGAGTATCC 59.244 44.000 0.00 0.00 33.66 2.59
427 431 6.578023 AGTGAGCATCCTTTTACAGAGTATC 58.422 40.000 0.00 0.00 0.00 2.24
428 432 6.552445 AGTGAGCATCCTTTTACAGAGTAT 57.448 37.500 0.00 0.00 0.00 2.12
429 433 6.360370 AAGTGAGCATCCTTTTACAGAGTA 57.640 37.500 0.00 0.00 0.00 2.59
430 434 4.899352 AGTGAGCATCCTTTTACAGAGT 57.101 40.909 0.00 0.00 0.00 3.24
431 435 5.618640 GCAAAGTGAGCATCCTTTTACAGAG 60.619 44.000 0.00 0.00 34.74 3.35
432 436 4.216257 GCAAAGTGAGCATCCTTTTACAGA 59.784 41.667 0.00 0.00 34.74 3.41
433 437 4.479619 GCAAAGTGAGCATCCTTTTACAG 58.520 43.478 0.00 0.00 34.74 2.74
434 438 3.255642 GGCAAAGTGAGCATCCTTTTACA 59.744 43.478 0.00 0.00 34.74 2.41
435 439 3.255642 TGGCAAAGTGAGCATCCTTTTAC 59.744 43.478 0.00 0.00 34.74 2.01
436 440 3.495331 TGGCAAAGTGAGCATCCTTTTA 58.505 40.909 0.00 0.00 34.74 1.52
437 441 2.318908 TGGCAAAGTGAGCATCCTTTT 58.681 42.857 0.00 0.00 34.74 2.27
438 442 1.999648 TGGCAAAGTGAGCATCCTTT 58.000 45.000 0.00 0.00 36.49 3.11
439 443 2.097825 GATGGCAAAGTGAGCATCCTT 58.902 47.619 0.00 0.00 0.00 3.36
440 444 1.284198 AGATGGCAAAGTGAGCATCCT 59.716 47.619 0.00 0.00 0.00 3.24
441 445 1.760192 AGATGGCAAAGTGAGCATCC 58.240 50.000 0.00 0.00 0.00 3.51
442 446 3.273434 TGTAGATGGCAAAGTGAGCATC 58.727 45.455 0.00 0.00 0.00 3.91
443 447 3.354948 TGTAGATGGCAAAGTGAGCAT 57.645 42.857 0.00 0.00 0.00 3.79
444 448 2.857186 TGTAGATGGCAAAGTGAGCA 57.143 45.000 0.00 0.00 0.00 4.26
445 449 5.121454 GCTATATGTAGATGGCAAAGTGAGC 59.879 44.000 0.00 0.00 33.74 4.26
446 450 6.462500 AGCTATATGTAGATGGCAAAGTGAG 58.538 40.000 0.00 0.00 35.86 3.51
447 451 6.425210 AGCTATATGTAGATGGCAAAGTGA 57.575 37.500 0.00 0.00 35.86 3.41
448 452 7.148507 GCTTAGCTATATGTAGATGGCAAAGTG 60.149 40.741 0.00 0.00 35.86 3.16
449 453 6.876257 GCTTAGCTATATGTAGATGGCAAAGT 59.124 38.462 0.00 0.00 35.86 2.66
450 454 7.064371 CAGCTTAGCTATATGTAGATGGCAAAG 59.936 40.741 6.35 4.71 36.40 2.77
451 455 6.875726 CAGCTTAGCTATATGTAGATGGCAAA 59.124 38.462 6.35 0.00 36.40 3.68
452 456 6.014242 ACAGCTTAGCTATATGTAGATGGCAA 60.014 38.462 6.35 0.00 36.40 4.52
453 457 5.481824 ACAGCTTAGCTATATGTAGATGGCA 59.518 40.000 6.35 0.00 36.40 4.92
454 458 5.971763 ACAGCTTAGCTATATGTAGATGGC 58.028 41.667 6.35 3.93 36.40 4.40
455 459 7.382110 ACAACAGCTTAGCTATATGTAGATGG 58.618 38.462 6.35 0.00 36.40 3.51
456 460 8.824159 AACAACAGCTTAGCTATATGTAGATG 57.176 34.615 6.35 6.17 36.40 2.90
457 461 8.642432 TGAACAACAGCTTAGCTATATGTAGAT 58.358 33.333 6.35 0.00 36.40 1.98
458 462 8.007405 TGAACAACAGCTTAGCTATATGTAGA 57.993 34.615 6.35 0.58 36.40 2.59
459 463 8.291888 CTGAACAACAGCTTAGCTATATGTAG 57.708 38.462 6.35 4.37 39.86 2.74
475 479 6.286240 ACTGCAGATATAGACTGAACAACA 57.714 37.500 23.35 2.22 37.54 3.33
476 480 7.759886 TGTTACTGCAGATATAGACTGAACAAC 59.240 37.037 23.35 2.62 37.54 3.32
477 481 7.836842 TGTTACTGCAGATATAGACTGAACAA 58.163 34.615 23.35 0.00 37.54 2.83
478 482 7.404671 TGTTACTGCAGATATAGACTGAACA 57.595 36.000 23.35 10.60 37.54 3.18
479 483 8.879342 AATGTTACTGCAGATATAGACTGAAC 57.121 34.615 23.35 8.38 37.54 3.18
480 484 9.890629 AAAATGTTACTGCAGATATAGACTGAA 57.109 29.630 23.35 2.98 37.54 3.02
481 485 9.534565 GAAAATGTTACTGCAGATATAGACTGA 57.465 33.333 23.35 0.00 37.54 3.41
482 486 9.317936 TGAAAATGTTACTGCAGATATAGACTG 57.682 33.333 23.35 5.64 38.27 3.51
485 489 9.836864 ACATGAAAATGTTACTGCAGATATAGA 57.163 29.630 23.35 1.01 0.00 1.98
487 491 9.612066 TGACATGAAAATGTTACTGCAGATATA 57.388 29.630 23.35 6.22 34.45 0.86
488 492 8.510243 TGACATGAAAATGTTACTGCAGATAT 57.490 30.769 23.35 5.85 34.45 1.63
489 493 7.920160 TGACATGAAAATGTTACTGCAGATA 57.080 32.000 23.35 6.31 34.45 1.98
490 494 6.822667 TGACATGAAAATGTTACTGCAGAT 57.177 33.333 23.35 7.41 34.45 2.90
491 495 6.631971 TTGACATGAAAATGTTACTGCAGA 57.368 33.333 23.35 0.48 34.45 4.26
492 496 6.183360 GCATTGACATGAAAATGTTACTGCAG 60.183 38.462 13.48 13.48 42.26 4.41
493 497 5.634439 GCATTGACATGAAAATGTTACTGCA 59.366 36.000 19.28 0.00 42.26 4.41
494 498 5.634439 TGCATTGACATGAAAATGTTACTGC 59.366 36.000 19.28 14.79 42.67 4.40
495 499 6.864685 AGTGCATTGACATGAAAATGTTACTG 59.135 34.615 21.08 0.00 36.39 2.74
496 500 6.864685 CAGTGCATTGACATGAAAATGTTACT 59.135 34.615 19.28 19.02 36.39 2.24
497 501 6.642131 ACAGTGCATTGACATGAAAATGTTAC 59.358 34.615 16.98 17.82 36.39 2.50
498 502 6.747125 ACAGTGCATTGACATGAAAATGTTA 58.253 32.000 16.98 10.87 36.39 2.41
499 503 5.603596 ACAGTGCATTGACATGAAAATGTT 58.396 33.333 16.98 8.71 36.39 2.71
500 504 5.204409 ACAGTGCATTGACATGAAAATGT 57.796 34.783 16.98 0.00 36.39 2.71
501 505 7.169476 TGTTAACAGTGCATTGACATGAAAATG 59.831 33.333 16.98 16.05 36.95 2.32
502 506 7.169645 GTGTTAACAGTGCATTGACATGAAAAT 59.830 33.333 16.98 0.00 29.53 1.82
503 507 6.475076 GTGTTAACAGTGCATTGACATGAAAA 59.525 34.615 16.98 0.00 29.53 2.29
504 508 5.976534 GTGTTAACAGTGCATTGACATGAAA 59.023 36.000 16.98 0.00 29.53 2.69
505 509 5.067023 TGTGTTAACAGTGCATTGACATGAA 59.933 36.000 16.98 0.00 29.53 2.57
506 510 4.578105 TGTGTTAACAGTGCATTGACATGA 59.422 37.500 16.98 0.00 29.53 3.07
507 511 4.857799 TGTGTTAACAGTGCATTGACATG 58.142 39.130 16.98 0.00 29.53 3.21
508 512 5.463286 CATGTGTTAACAGTGCATTGACAT 58.537 37.500 16.98 11.39 40.39 3.06
509 513 4.792380 GCATGTGTTAACAGTGCATTGACA 60.792 41.667 28.03 9.51 40.39 3.58
510 514 3.670055 GCATGTGTTAACAGTGCATTGAC 59.330 43.478 28.03 4.41 40.39 3.18
511 515 3.317430 TGCATGTGTTAACAGTGCATTGA 59.683 39.130 30.20 16.72 41.58 2.57
512 516 3.640592 TGCATGTGTTAACAGTGCATTG 58.359 40.909 30.20 7.79 41.58 2.82
515 519 2.030096 CCATGCATGTGTTAACAGTGCA 60.030 45.455 33.21 33.21 45.81 4.57
516 520 2.030007 ACCATGCATGTGTTAACAGTGC 60.030 45.455 27.03 27.03 40.39 4.40
517 521 3.921119 ACCATGCATGTGTTAACAGTG 57.079 42.857 24.58 12.03 40.39 3.66
518 522 5.476599 ACATAACCATGCATGTGTTAACAGT 59.523 36.000 28.69 24.73 36.20 3.55
519 523 5.953183 ACATAACCATGCATGTGTTAACAG 58.047 37.500 28.69 24.34 36.20 3.16
520 524 5.105957 GGACATAACCATGCATGTGTTAACA 60.106 40.000 28.69 17.74 35.55 2.41
521 525 5.125417 AGGACATAACCATGCATGTGTTAAC 59.875 40.000 28.69 23.55 35.55 2.01
522 526 5.260424 AGGACATAACCATGCATGTGTTAA 58.740 37.500 28.69 19.04 35.55 2.01
523 527 4.854173 AGGACATAACCATGCATGTGTTA 58.146 39.130 27.86 27.86 35.55 2.41
524 528 3.700538 AGGACATAACCATGCATGTGTT 58.299 40.909 26.21 26.21 35.55 3.32
525 529 3.370840 AGGACATAACCATGCATGTGT 57.629 42.857 24.58 20.89 35.55 3.72
526 530 3.181484 CCAAGGACATAACCATGCATGTG 60.181 47.826 24.58 17.95 35.55 3.21
527 531 3.025978 CCAAGGACATAACCATGCATGT 58.974 45.455 24.58 10.36 38.08 3.21
528 532 2.363038 CCCAAGGACATAACCATGCATG 59.637 50.000 20.19 20.19 35.39 4.06
529 533 2.669781 CCCAAGGACATAACCATGCAT 58.330 47.619 0.00 0.00 35.39 3.96
530 534 1.959508 GCCCAAGGACATAACCATGCA 60.960 52.381 0.00 0.00 35.39 3.96
531 535 0.746659 GCCCAAGGACATAACCATGC 59.253 55.000 0.00 0.00 35.39 4.06
532 536 2.026641 CTGCCCAAGGACATAACCATG 58.973 52.381 0.00 0.00 38.21 3.66
533 537 1.686115 GCTGCCCAAGGACATAACCAT 60.686 52.381 0.00 0.00 0.00 3.55
534 538 0.323360 GCTGCCCAAGGACATAACCA 60.323 55.000 0.00 0.00 0.00 3.67
535 539 0.323360 TGCTGCCCAAGGACATAACC 60.323 55.000 0.00 0.00 0.00 2.85
536 540 1.474077 CTTGCTGCCCAAGGACATAAC 59.526 52.381 0.00 0.00 45.78 1.89
537 541 1.838112 CTTGCTGCCCAAGGACATAA 58.162 50.000 0.00 0.00 45.78 1.90
538 542 3.575506 CTTGCTGCCCAAGGACATA 57.424 52.632 0.00 0.00 45.78 2.29
539 543 4.428845 CTTGCTGCCCAAGGACAT 57.571 55.556 0.00 0.00 45.78 3.06
552 556 0.593128 CAGGTACACAAGCCACTTGC 59.407 55.000 7.23 0.00 44.43 4.01
553 557 2.254546 TCAGGTACACAAGCCACTTG 57.745 50.000 5.80 5.80 45.85 3.16
554 558 2.949644 GTTTCAGGTACACAAGCCACTT 59.050 45.455 0.00 0.00 0.00 3.16
555 559 2.572290 GTTTCAGGTACACAAGCCACT 58.428 47.619 0.00 0.00 0.00 4.00
556 560 1.263217 CGTTTCAGGTACACAAGCCAC 59.737 52.381 0.00 0.00 0.00 5.01
557 561 1.139256 TCGTTTCAGGTACACAAGCCA 59.861 47.619 0.00 0.00 0.00 4.75
558 562 1.798813 CTCGTTTCAGGTACACAAGCC 59.201 52.381 0.00 0.00 0.00 4.35
559 563 2.750948 TCTCGTTTCAGGTACACAAGC 58.249 47.619 0.00 0.00 0.00 4.01
560 564 3.927142 GGATCTCGTTTCAGGTACACAAG 59.073 47.826 0.00 0.00 0.00 3.16
561 565 3.613193 CGGATCTCGTTTCAGGTACACAA 60.613 47.826 0.00 0.00 0.00 3.33
562 566 2.094906 CGGATCTCGTTTCAGGTACACA 60.095 50.000 0.00 0.00 0.00 3.72
563 567 2.527100 CGGATCTCGTTTCAGGTACAC 58.473 52.381 0.00 0.00 0.00 2.90
564 568 1.475280 CCGGATCTCGTTTCAGGTACA 59.525 52.381 0.00 0.00 37.11 2.90
565 569 1.475682 ACCGGATCTCGTTTCAGGTAC 59.524 52.381 9.46 0.00 39.47 3.34
566 570 1.843368 ACCGGATCTCGTTTCAGGTA 58.157 50.000 9.46 0.00 39.47 3.08
567 571 0.974383 AACCGGATCTCGTTTCAGGT 59.026 50.000 9.46 2.28 42.46 4.00
568 572 1.359848 CAACCGGATCTCGTTTCAGG 58.640 55.000 9.46 0.00 37.11 3.86
569 573 0.721718 GCAACCGGATCTCGTTTCAG 59.278 55.000 9.46 0.00 37.11 3.02
570 574 0.320374 AGCAACCGGATCTCGTTTCA 59.680 50.000 9.46 0.00 37.11 2.69
571 575 1.128692 CAAGCAACCGGATCTCGTTTC 59.871 52.381 9.46 0.00 37.11 2.78
572 576 1.156736 CAAGCAACCGGATCTCGTTT 58.843 50.000 9.46 0.00 37.11 3.60
573 577 0.673644 CCAAGCAACCGGATCTCGTT 60.674 55.000 9.46 0.00 37.11 3.85
574 578 1.079127 CCAAGCAACCGGATCTCGT 60.079 57.895 9.46 0.00 37.11 4.18
575 579 0.807667 CTCCAAGCAACCGGATCTCG 60.808 60.000 9.46 0.00 38.88 4.04
576 580 1.092345 GCTCCAAGCAACCGGATCTC 61.092 60.000 9.46 0.00 41.89 2.75
577 581 1.078143 GCTCCAAGCAACCGGATCT 60.078 57.895 9.46 0.00 41.89 2.75
578 582 3.502572 GCTCCAAGCAACCGGATC 58.497 61.111 9.46 0.00 41.89 3.36
587 591 1.020333 CAGTGCTCTCTGCTCCAAGC 61.020 60.000 0.00 0.00 43.37 4.01
588 592 3.140576 CAGTGCTCTCTGCTCCAAG 57.859 57.895 0.00 0.00 43.37 3.61
602 606 6.745907 CAGACAATGATCATGTAAAAGCAGTG 59.254 38.462 9.46 2.09 0.00 3.66
622 626 6.672266 AGATAACCAAAGAGAGAACAGACA 57.328 37.500 0.00 0.00 0.00 3.41
625 629 7.099764 TGCTAAGATAACCAAAGAGAGAACAG 58.900 38.462 0.00 0.00 0.00 3.16
627 631 7.148390 GGTTGCTAAGATAACCAAAGAGAGAAC 60.148 40.741 0.00 0.00 44.48 3.01
628 632 6.879458 GGTTGCTAAGATAACCAAAGAGAGAA 59.121 38.462 0.00 0.00 44.48 2.87
656 664 7.208064 AGTGGTGATTAATTAAGGGCTAAGA 57.792 36.000 3.94 0.00 0.00 2.10
662 670 8.343168 TGTGTTTAGTGGTGATTAATTAAGGG 57.657 34.615 3.94 0.00 0.00 3.95
721 729 1.202675 TCATCCATTGATGCGCTGCTA 60.203 47.619 9.73 0.00 46.60 3.49
742 750 3.588511 TTGACCTGCATGGGGCCA 61.589 61.111 4.39 0.00 43.89 5.36
751 759 1.132500 ATAGGTAGGGCTTGACCTGC 58.868 55.000 5.06 3.33 45.86 4.85
772 780 5.355596 CCTAGTTCTTAATGAGAGTGCAGG 58.644 45.833 0.00 0.00 35.37 4.85
781 789 3.053917 GGGGTTGGCCTAGTTCTTAATGA 60.054 47.826 3.32 0.00 34.45 2.57
964 983 1.264288 GAAACCAGACCAAAGCAGACG 59.736 52.381 0.00 0.00 0.00 4.18
1072 1095 0.260230 CTGTAGGAGCTGGAGGAGGA 59.740 60.000 0.00 0.00 0.00 3.71
1160 1186 4.657824 CGAACACCACCGCCGACT 62.658 66.667 0.00 0.00 0.00 4.18
1274 1300 1.269998 CCGGCTCCTTACTATTCCTCG 59.730 57.143 0.00 0.00 0.00 4.63
1473 1511 2.353889 GCAGCATCGTTGATCACTTGAT 59.646 45.455 0.00 0.00 37.51 2.57
1475 1513 1.465777 TGCAGCATCGTTGATCACTTG 59.534 47.619 0.00 0.00 0.00 3.16
1476 1514 1.812235 TGCAGCATCGTTGATCACTT 58.188 45.000 0.00 0.00 0.00 3.16
1478 1516 1.667212 TCATGCAGCATCGTTGATCAC 59.333 47.619 4.38 0.00 0.00 3.06
1552 1592 2.765108 TCTTAGATCTCGCGCAAGAG 57.235 50.000 8.75 7.14 43.02 2.85
1600 1745 1.541147 CTACACGGACGAACCCAAGTA 59.459 52.381 0.00 0.00 34.64 2.24
1601 1746 0.316204 CTACACGGACGAACCCAAGT 59.684 55.000 0.00 0.00 34.64 3.16
1738 1945 2.279741 GCTTTAGATCGCCATGACACA 58.720 47.619 0.00 0.00 0.00 3.72
1744 1951 3.386768 ACATACGCTTTAGATCGCCAT 57.613 42.857 0.00 0.00 0.00 4.40
1796 2011 9.267084 GAGAGAAGAAATGGAATGGAAGTATAC 57.733 37.037 0.00 0.00 0.00 1.47
1797 2012 8.992349 TGAGAGAAGAAATGGAATGGAAGTATA 58.008 33.333 0.00 0.00 0.00 1.47
1822 2037 7.819415 ACATATATAAACTGATCACGGGTCATG 59.181 37.037 0.00 0.00 0.00 3.07
1959 3379 1.065199 GGATGAGTGGAGGCAATGTGA 60.065 52.381 0.00 0.00 0.00 3.58
2116 3536 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
2129 3549 9.981460 ATAATCCTTTTATTATTGCCTCTAGGG 57.019 33.333 0.00 0.00 29.60 3.53
2168 3588 9.955208 GCATGAACAATAGACAATTATCATGAA 57.045 29.630 19.46 0.00 44.39 2.57
2169 3589 9.346005 AGCATGAACAATAGACAATTATCATGA 57.654 29.630 19.46 0.00 44.39 3.07
2185 3605 8.341903 CGGACAATACAATTATAGCATGAACAA 58.658 33.333 0.00 0.00 0.00 2.83
2186 3606 7.041440 CCGGACAATACAATTATAGCATGAACA 60.041 37.037 0.00 0.00 0.00 3.18
2187 3607 7.172532 TCCGGACAATACAATTATAGCATGAAC 59.827 37.037 0.00 0.00 0.00 3.18
2188 3608 7.220740 TCCGGACAATACAATTATAGCATGAA 58.779 34.615 0.00 0.00 0.00 2.57
2189 3609 6.764379 TCCGGACAATACAATTATAGCATGA 58.236 36.000 0.00 0.00 0.00 3.07
2190 3610 7.433708 TTCCGGACAATACAATTATAGCATG 57.566 36.000 1.83 0.00 0.00 4.06
2191 3611 8.635765 ATTTCCGGACAATACAATTATAGCAT 57.364 30.769 1.83 0.00 0.00 3.79
2192 3612 7.717436 TGATTTCCGGACAATACAATTATAGCA 59.283 33.333 1.83 0.00 0.00 3.49
2193 3613 8.094798 TGATTTCCGGACAATACAATTATAGC 57.905 34.615 1.83 0.00 0.00 2.97
2199 3619 9.567776 TGTATTATGATTTCCGGACAATACAAT 57.432 29.630 1.83 0.00 35.55 2.71
2200 3620 8.966069 TGTATTATGATTTCCGGACAATACAA 57.034 30.769 1.83 0.00 35.55 2.41
2201 3621 8.998377 CATGTATTATGATTTCCGGACAATACA 58.002 33.333 21.03 21.03 39.99 2.29
2202 3622 8.999431 ACATGTATTATGATTTCCGGACAATAC 58.001 33.333 1.83 11.52 0.00 1.89
2203 3623 8.998377 CACATGTATTATGATTTCCGGACAATA 58.002 33.333 1.83 0.00 0.00 1.90
2204 3624 7.502226 ACACATGTATTATGATTTCCGGACAAT 59.498 33.333 1.83 7.66 0.00 2.71
2205 3625 6.826231 ACACATGTATTATGATTTCCGGACAA 59.174 34.615 1.83 2.11 0.00 3.18
2206 3626 6.259829 CACACATGTATTATGATTTCCGGACA 59.740 38.462 1.83 0.00 0.00 4.02
2207 3627 6.481976 TCACACATGTATTATGATTTCCGGAC 59.518 38.462 1.83 0.00 0.00 4.79
2208 3628 6.587273 TCACACATGTATTATGATTTCCGGA 58.413 36.000 0.00 0.00 0.00 5.14
2209 3629 6.859420 TCACACATGTATTATGATTTCCGG 57.141 37.500 0.00 0.00 0.00 5.14
2210 3630 9.811655 GTATTCACACATGTATTATGATTTCCG 57.188 33.333 0.00 0.00 0.00 4.30
2219 3639 9.758651 GTGGTCTATGTATTCACACATGTATTA 57.241 33.333 0.00 0.00 39.46 0.98
2220 3640 8.264347 TGTGGTCTATGTATTCACACATGTATT 58.736 33.333 0.00 0.00 39.46 1.89
2221 3641 7.791029 TGTGGTCTATGTATTCACACATGTAT 58.209 34.615 0.00 0.00 39.46 2.29
2222 3642 7.176589 TGTGGTCTATGTATTCACACATGTA 57.823 36.000 0.00 0.00 39.46 2.29
2223 3643 6.048732 TGTGGTCTATGTATTCACACATGT 57.951 37.500 0.00 0.00 39.46 3.21
2224 3644 6.983474 TTGTGGTCTATGTATTCACACATG 57.017 37.500 0.00 0.00 39.46 3.21
2225 3645 9.276590 CATATTGTGGTCTATGTATTCACACAT 57.723 33.333 0.00 0.00 41.88 3.21
2226 3646 8.264347 ACATATTGTGGTCTATGTATTCACACA 58.736 33.333 0.00 0.00 36.93 3.72
2227 3647 8.662781 ACATATTGTGGTCTATGTATTCACAC 57.337 34.615 0.00 0.00 36.93 3.82
2228 3648 7.931407 GGACATATTGTGGTCTATGTATTCACA 59.069 37.037 0.00 0.00 38.38 3.58
2229 3649 7.387948 GGGACATATTGTGGTCTATGTATTCAC 59.612 40.741 0.00 0.00 38.38 3.18
2230 3650 7.292356 AGGGACATATTGTGGTCTATGTATTCA 59.708 37.037 0.00 0.00 38.38 2.57
2231 3651 7.680730 AGGGACATATTGTGGTCTATGTATTC 58.319 38.462 0.00 0.00 38.38 1.75
2232 3652 7.633018 AGGGACATATTGTGGTCTATGTATT 57.367 36.000 0.00 0.00 38.38 1.89
2233 3653 7.956315 ACTAGGGACATATTGTGGTCTATGTAT 59.044 37.037 0.00 0.00 38.38 2.29
2234 3654 7.302948 ACTAGGGACATATTGTGGTCTATGTA 58.697 38.462 0.00 0.00 38.38 2.29
2235 3655 6.143915 ACTAGGGACATATTGTGGTCTATGT 58.856 40.000 0.00 0.00 40.38 2.29
2236 3656 6.672266 ACTAGGGACATATTGTGGTCTATG 57.328 41.667 0.00 0.00 34.49 2.23
2237 3657 7.038941 GCTTACTAGGGACATATTGTGGTCTAT 60.039 40.741 0.00 0.00 34.49 1.98
2238 3658 6.267014 GCTTACTAGGGACATATTGTGGTCTA 59.733 42.308 0.00 0.00 34.49 2.59
2239 3659 5.070580 GCTTACTAGGGACATATTGTGGTCT 59.929 44.000 0.00 0.00 34.49 3.85
2240 3660 5.298347 GCTTACTAGGGACATATTGTGGTC 58.702 45.833 0.00 0.00 0.00 4.02
2241 3661 4.102681 GGCTTACTAGGGACATATTGTGGT 59.897 45.833 0.00 0.00 0.00 4.16
2242 3662 4.348168 AGGCTTACTAGGGACATATTGTGG 59.652 45.833 0.00 0.00 0.00 4.17
2243 3663 5.305644 AGAGGCTTACTAGGGACATATTGTG 59.694 44.000 0.00 0.00 0.00 3.33
2244 3664 5.468658 AGAGGCTTACTAGGGACATATTGT 58.531 41.667 0.00 0.00 0.00 2.71
2245 3665 6.722129 ACTAGAGGCTTACTAGGGACATATTG 59.278 42.308 13.13 0.00 40.86 1.90
2246 3666 6.865520 ACTAGAGGCTTACTAGGGACATATT 58.134 40.000 13.13 0.00 40.86 1.28
2247 3667 6.471942 ACTAGAGGCTTACTAGGGACATAT 57.528 41.667 13.13 0.00 40.86 1.78
2248 3668 5.926580 ACTAGAGGCTTACTAGGGACATA 57.073 43.478 13.13 0.00 40.86 2.29
2249 3669 4.817874 ACTAGAGGCTTACTAGGGACAT 57.182 45.455 13.13 0.00 40.86 3.06
2250 3670 4.017775 TCAACTAGAGGCTTACTAGGGACA 60.018 45.833 13.13 0.00 40.86 4.02
2251 3671 4.338964 GTCAACTAGAGGCTTACTAGGGAC 59.661 50.000 13.13 14.30 40.86 4.46
2252 3672 4.230041 AGTCAACTAGAGGCTTACTAGGGA 59.770 45.833 13.13 8.30 40.86 4.20
2253 3673 4.538738 AGTCAACTAGAGGCTTACTAGGG 58.461 47.826 13.13 6.54 40.86 3.53
2254 3674 5.239963 GCTAGTCAACTAGAGGCTTACTAGG 59.760 48.000 19.03 0.00 46.80 3.02
2255 3675 6.059484 AGCTAGTCAACTAGAGGCTTACTAG 58.941 44.000 19.03 8.32 46.80 2.57
2256 3676 6.003859 AGCTAGTCAACTAGAGGCTTACTA 57.996 41.667 19.03 0.00 46.80 1.82
2257 3677 4.862371 AGCTAGTCAACTAGAGGCTTACT 58.138 43.478 19.03 3.99 46.80 2.24
2258 3678 4.260866 CGAGCTAGTCAACTAGAGGCTTAC 60.261 50.000 19.03 1.96 46.80 2.34
2259 3679 3.878103 CGAGCTAGTCAACTAGAGGCTTA 59.122 47.826 19.03 0.00 46.80 3.09
2260 3680 2.685897 CGAGCTAGTCAACTAGAGGCTT 59.314 50.000 19.03 1.20 46.80 4.35
2261 3681 2.294074 CGAGCTAGTCAACTAGAGGCT 58.706 52.381 19.03 10.84 46.80 4.58
2262 3682 2.018515 ACGAGCTAGTCAACTAGAGGC 58.981 52.381 19.03 6.58 46.80 4.70
2263 3683 3.690139 TCAACGAGCTAGTCAACTAGAGG 59.310 47.826 19.03 10.05 46.80 3.69
2264 3684 4.948608 TCAACGAGCTAGTCAACTAGAG 57.051 45.455 19.03 11.89 46.80 2.43
2265 3685 4.941873 TGATCAACGAGCTAGTCAACTAGA 59.058 41.667 19.03 0.00 46.80 2.43
2266 3686 5.236655 TGATCAACGAGCTAGTCAACTAG 57.763 43.478 11.99 11.99 46.63 2.57
2267 3687 5.638596 TTGATCAACGAGCTAGTCAACTA 57.361 39.130 3.38 0.00 0.00 2.24
2268 3688 4.521130 TTGATCAACGAGCTAGTCAACT 57.479 40.909 3.38 0.00 0.00 3.16
2269 3689 6.266323 TCTATTGATCAACGAGCTAGTCAAC 58.734 40.000 11.07 0.00 0.00 3.18
2270 3690 6.451064 TCTATTGATCAACGAGCTAGTCAA 57.549 37.500 11.07 0.55 0.00 3.18
2271 3691 6.641169 ATCTATTGATCAACGAGCTAGTCA 57.359 37.500 11.07 0.00 0.00 3.41
2272 3692 7.812648 ACTATCTATTGATCAACGAGCTAGTC 58.187 38.462 20.08 0.00 34.32 2.59
2273 3693 7.445707 TGACTATCTATTGATCAACGAGCTAGT 59.554 37.037 23.15 23.15 34.32 2.57
2274 3694 7.811653 TGACTATCTATTGATCAACGAGCTAG 58.188 38.462 11.07 16.60 34.32 3.42
2275 3695 7.745620 TGACTATCTATTGATCAACGAGCTA 57.254 36.000 11.07 6.46 34.32 3.32
2276 3696 6.641169 TGACTATCTATTGATCAACGAGCT 57.359 37.500 11.07 5.61 34.32 4.09
2277 3697 6.309980 CCATGACTATCTATTGATCAACGAGC 59.690 42.308 11.07 3.26 34.32 5.03
2278 3698 7.374272 ACCATGACTATCTATTGATCAACGAG 58.626 38.462 11.07 11.28 34.32 4.18
2279 3699 7.290110 ACCATGACTATCTATTGATCAACGA 57.710 36.000 11.07 10.80 34.32 3.85
2280 3700 7.953158 AACCATGACTATCTATTGATCAACG 57.047 36.000 11.07 5.26 34.32 4.10
2281 3701 8.778358 GGAAACCATGACTATCTATTGATCAAC 58.222 37.037 11.07 0.00 34.32 3.18
2282 3702 8.717717 AGGAAACCATGACTATCTATTGATCAA 58.282 33.333 11.26 11.26 34.32 2.57
2283 3703 8.152898 CAGGAAACCATGACTATCTATTGATCA 58.847 37.037 0.00 0.00 34.32 2.92
2284 3704 8.370940 TCAGGAAACCATGACTATCTATTGATC 58.629 37.037 0.00 0.00 34.32 2.92
2285 3705 8.153550 GTCAGGAAACCATGACTATCTATTGAT 58.846 37.037 0.00 0.00 42.06 2.57
2286 3706 7.500992 GTCAGGAAACCATGACTATCTATTGA 58.499 38.462 0.00 0.00 42.06 2.57
2287 3707 7.721286 GTCAGGAAACCATGACTATCTATTG 57.279 40.000 0.00 0.00 42.06 1.90
2296 3716 4.192317 GTCCATAGTCAGGAAACCATGAC 58.808 47.826 0.00 2.44 44.97 3.06
2297 3717 3.843619 TGTCCATAGTCAGGAAACCATGA 59.156 43.478 0.00 0.00 36.80 3.07
2298 3718 4.220693 TGTCCATAGTCAGGAAACCATG 57.779 45.455 0.00 0.00 36.80 3.66
2299 3719 4.385643 CCATGTCCATAGTCAGGAAACCAT 60.386 45.833 0.00 0.00 36.80 3.55
2300 3720 3.054434 CCATGTCCATAGTCAGGAAACCA 60.054 47.826 0.00 0.00 36.80 3.67
2301 3721 3.545703 CCATGTCCATAGTCAGGAAACC 58.454 50.000 0.00 0.00 36.80 3.27
2302 3722 3.545703 CCCATGTCCATAGTCAGGAAAC 58.454 50.000 0.00 0.00 36.80 2.78
2303 3723 2.509548 CCCCATGTCCATAGTCAGGAAA 59.490 50.000 0.00 0.00 36.80 3.13
2304 3724 2.126882 CCCCATGTCCATAGTCAGGAA 58.873 52.381 0.00 0.00 36.80 3.36
2305 3725 1.293763 TCCCCATGTCCATAGTCAGGA 59.706 52.381 0.00 0.00 0.00 3.86
2306 3726 1.806496 TCCCCATGTCCATAGTCAGG 58.194 55.000 0.00 0.00 0.00 3.86
2307 3727 2.707791 ACATCCCCATGTCCATAGTCAG 59.292 50.000 0.00 0.00 39.15 3.51
2308 3728 2.775418 ACATCCCCATGTCCATAGTCA 58.225 47.619 0.00 0.00 39.15 3.41
2317 3737 4.136796 CGTTATCAATGACATCCCCATGT 58.863 43.478 0.00 0.00 46.64 3.21
2318 3738 3.503363 CCGTTATCAATGACATCCCCATG 59.497 47.826 0.00 0.00 35.92 3.66
2319 3739 3.498481 CCCGTTATCAATGACATCCCCAT 60.498 47.826 0.00 0.00 0.00 4.00
2320 3740 2.158682 CCCGTTATCAATGACATCCCCA 60.159 50.000 0.00 0.00 0.00 4.96
2321 3741 2.105821 TCCCGTTATCAATGACATCCCC 59.894 50.000 0.00 0.00 0.00 4.81
2322 3742 3.485463 TCCCGTTATCAATGACATCCC 57.515 47.619 0.00 0.00 0.00 3.85
2323 3743 4.452455 GTGATCCCGTTATCAATGACATCC 59.548 45.833 0.00 0.00 37.61 3.51
2324 3744 5.056480 TGTGATCCCGTTATCAATGACATC 58.944 41.667 0.00 0.00 37.61 3.06
2325 3745 5.034852 TGTGATCCCGTTATCAATGACAT 57.965 39.130 0.00 0.00 37.61 3.06
2326 3746 4.479786 TGTGATCCCGTTATCAATGACA 57.520 40.909 0.00 0.00 37.61 3.58
2327 3747 5.056480 TGATGTGATCCCGTTATCAATGAC 58.944 41.667 0.00 0.00 37.61 3.06
2328 3748 5.289083 TGATGTGATCCCGTTATCAATGA 57.711 39.130 0.00 0.00 37.61 2.57
2329 3749 6.564709 AATGATGTGATCCCGTTATCAATG 57.435 37.500 0.00 0.00 37.61 2.82
2330 3750 6.881065 CCTAATGATGTGATCCCGTTATCAAT 59.119 38.462 0.00 0.00 37.61 2.57
2331 3751 6.042666 TCCTAATGATGTGATCCCGTTATCAA 59.957 38.462 0.00 0.00 37.61 2.57
2332 3752 5.542251 TCCTAATGATGTGATCCCGTTATCA 59.458 40.000 0.00 0.00 33.48 2.15
2333 3753 6.037786 TCCTAATGATGTGATCCCGTTATC 57.962 41.667 0.00 0.00 0.00 1.75
2334 3754 5.780282 TCTCCTAATGATGTGATCCCGTTAT 59.220 40.000 0.00 0.00 0.00 1.89
2335 3755 5.144832 TCTCCTAATGATGTGATCCCGTTA 58.855 41.667 0.00 0.00 0.00 3.18
2336 3756 3.967326 TCTCCTAATGATGTGATCCCGTT 59.033 43.478 0.00 0.00 0.00 4.44
2337 3757 3.576861 TCTCCTAATGATGTGATCCCGT 58.423 45.455 0.00 0.00 0.00 5.28
2338 3758 4.607293 TTCTCCTAATGATGTGATCCCG 57.393 45.455 0.00 0.00 0.00 5.14
2339 3759 6.119240 TCATTCTCCTAATGATGTGATCCC 57.881 41.667 0.00 0.00 32.21 3.85
2347 3767 7.166851 GTCCATCACATCATTCTCCTAATGAT 58.833 38.462 7.28 7.28 45.40 2.45
2348 3768 6.100134 TGTCCATCACATCATTCTCCTAATGA 59.900 38.462 3.13 3.13 40.50 2.57
2349 3769 6.293698 TGTCCATCACATCATTCTCCTAATG 58.706 40.000 0.00 0.00 0.00 1.90
2350 3770 6.505048 TGTCCATCACATCATTCTCCTAAT 57.495 37.500 0.00 0.00 0.00 1.73
2351 3771 5.955961 TGTCCATCACATCATTCTCCTAA 57.044 39.130 0.00 0.00 0.00 2.69
2352 3772 5.662657 TCTTGTCCATCACATCATTCTCCTA 59.337 40.000 0.00 0.00 33.90 2.94
2353 3773 4.472470 TCTTGTCCATCACATCATTCTCCT 59.528 41.667 0.00 0.00 33.90 3.69
2354 3774 4.574013 GTCTTGTCCATCACATCATTCTCC 59.426 45.833 0.00 0.00 33.90 3.71
2355 3775 4.574013 GGTCTTGTCCATCACATCATTCTC 59.426 45.833 0.00 0.00 33.90 2.87
2356 3776 4.521146 GGTCTTGTCCATCACATCATTCT 58.479 43.478 0.00 0.00 33.90 2.40
2357 3777 3.629398 GGGTCTTGTCCATCACATCATTC 59.371 47.826 0.00 0.00 33.90 2.67
2358 3778 3.010472 TGGGTCTTGTCCATCACATCATT 59.990 43.478 0.00 0.00 33.90 2.57
2359 3779 2.577563 TGGGTCTTGTCCATCACATCAT 59.422 45.455 0.00 0.00 33.90 2.45
2360 3780 1.984424 TGGGTCTTGTCCATCACATCA 59.016 47.619 0.00 0.00 33.90 3.07
2361 3781 2.787473 TGGGTCTTGTCCATCACATC 57.213 50.000 0.00 0.00 33.90 3.06
2362 3782 3.157087 GTTTGGGTCTTGTCCATCACAT 58.843 45.455 0.00 0.00 33.90 3.21
2363 3783 2.582052 GTTTGGGTCTTGTCCATCACA 58.418 47.619 0.00 0.00 33.82 3.58
2364 3784 1.886542 GGTTTGGGTCTTGTCCATCAC 59.113 52.381 0.00 0.00 33.82 3.06
2365 3785 1.780309 AGGTTTGGGTCTTGTCCATCA 59.220 47.619 0.00 0.00 33.82 3.07
2366 3786 2.586648 AGGTTTGGGTCTTGTCCATC 57.413 50.000 0.00 0.00 33.82 3.51
2367 3787 3.814316 GCTTAGGTTTGGGTCTTGTCCAT 60.814 47.826 0.00 0.00 33.82 3.41
2368 3788 2.488347 GCTTAGGTTTGGGTCTTGTCCA 60.488 50.000 0.00 0.00 0.00 4.02
2369 3789 2.160205 GCTTAGGTTTGGGTCTTGTCC 58.840 52.381 0.00 0.00 0.00 4.02
2370 3790 2.858745 TGCTTAGGTTTGGGTCTTGTC 58.141 47.619 0.00 0.00 0.00 3.18
2371 3791 3.525800 ATGCTTAGGTTTGGGTCTTGT 57.474 42.857 0.00 0.00 0.00 3.16
2372 3792 3.378427 GCTATGCTTAGGTTTGGGTCTTG 59.622 47.826 8.57 0.00 0.00 3.02
2373 3793 3.010138 TGCTATGCTTAGGTTTGGGTCTT 59.990 43.478 8.57 0.00 0.00 3.01
2374 3794 2.576191 TGCTATGCTTAGGTTTGGGTCT 59.424 45.455 8.57 0.00 0.00 3.85
2375 3795 2.683362 GTGCTATGCTTAGGTTTGGGTC 59.317 50.000 8.57 0.00 0.00 4.46
2376 3796 2.041081 TGTGCTATGCTTAGGTTTGGGT 59.959 45.455 8.57 0.00 0.00 4.51
2377 3797 2.722094 TGTGCTATGCTTAGGTTTGGG 58.278 47.619 8.57 0.00 0.00 4.12
2378 3798 4.458989 TCTTTGTGCTATGCTTAGGTTTGG 59.541 41.667 8.57 0.00 0.00 3.28
2379 3799 5.627499 TCTTTGTGCTATGCTTAGGTTTG 57.373 39.130 8.57 0.00 0.00 2.93
2380 3800 5.065218 CGATCTTTGTGCTATGCTTAGGTTT 59.935 40.000 8.57 0.00 0.00 3.27
2381 3801 4.572389 CGATCTTTGTGCTATGCTTAGGTT 59.428 41.667 8.57 0.00 0.00 3.50
2382 3802 4.122776 CGATCTTTGTGCTATGCTTAGGT 58.877 43.478 8.57 0.00 0.00 3.08
2383 3803 4.025396 CACGATCTTTGTGCTATGCTTAGG 60.025 45.833 8.57 0.00 0.00 2.69
2384 3804 4.568359 ACACGATCTTTGTGCTATGCTTAG 59.432 41.667 2.28 2.28 41.03 2.18
2385 3805 4.503910 ACACGATCTTTGTGCTATGCTTA 58.496 39.130 0.00 0.00 41.03 3.09
2386 3806 3.338249 ACACGATCTTTGTGCTATGCTT 58.662 40.909 0.00 0.00 41.03 3.91
2387 3807 2.977914 ACACGATCTTTGTGCTATGCT 58.022 42.857 0.00 0.00 41.03 3.79
2388 3808 3.865745 ACTACACGATCTTTGTGCTATGC 59.134 43.478 7.01 0.00 41.03 3.14
2389 3809 5.275927 CGAACTACACGATCTTTGTGCTATG 60.276 44.000 7.01 0.00 41.03 2.23
2390 3810 4.798907 CGAACTACACGATCTTTGTGCTAT 59.201 41.667 7.01 0.00 41.03 2.97
2391 3811 4.163552 CGAACTACACGATCTTTGTGCTA 58.836 43.478 7.01 0.00 41.03 3.49
2392 3812 2.987149 CGAACTACACGATCTTTGTGCT 59.013 45.455 7.01 0.00 41.03 4.40
2393 3813 2.729882 ACGAACTACACGATCTTTGTGC 59.270 45.455 7.01 0.00 41.03 4.57
2394 3814 4.966850 AACGAACTACACGATCTTTGTG 57.033 40.909 7.01 2.92 42.99 3.33
2395 3815 4.318546 GCAAACGAACTACACGATCTTTGT 60.319 41.667 0.00 2.73 34.70 2.83
2396 3816 4.084537 AGCAAACGAACTACACGATCTTTG 60.085 41.667 0.00 0.00 34.70 2.77
2397 3817 4.056050 AGCAAACGAACTACACGATCTTT 58.944 39.130 0.00 0.00 34.70 2.52
2398 3818 3.650139 AGCAAACGAACTACACGATCTT 58.350 40.909 0.00 0.00 34.70 2.40
2399 3819 3.299340 AGCAAACGAACTACACGATCT 57.701 42.857 0.00 0.00 34.70 2.75
2400 3820 4.409570 TCTAGCAAACGAACTACACGATC 58.590 43.478 0.00 0.00 34.70 3.69
2401 3821 4.413087 CTCTAGCAAACGAACTACACGAT 58.587 43.478 0.00 0.00 34.70 3.73
2402 3822 3.818387 CTCTAGCAAACGAACTACACGA 58.182 45.455 0.00 0.00 34.70 4.35
2403 3823 2.341760 GCTCTAGCAAACGAACTACACG 59.658 50.000 0.00 0.00 41.59 4.49
2404 3824 3.576648 AGCTCTAGCAAACGAACTACAC 58.423 45.455 4.54 0.00 45.16 2.90
2405 3825 3.936372 AGCTCTAGCAAACGAACTACA 57.064 42.857 4.54 0.00 45.16 2.74
2406 3826 5.593183 AAAAGCTCTAGCAAACGAACTAC 57.407 39.130 4.54 0.00 45.16 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.