Multiple sequence alignment - TraesCS5B01G054700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G054700 chr5B 100.000 6458 0 0 1 6458 59912643 59906186 0.000000e+00 11889.0
1 TraesCS5B01G054700 chr5B 83.893 149 17 6 392 539 374443833 374443975 1.130000e-27 135.0
2 TraesCS5B01G054700 chr5B 94.444 54 3 0 392 445 374440765 374440818 4.150000e-12 84.2
3 TraesCS5B01G054700 chr5B 81.000 100 11 8 509 603 82245441 82245345 8.980000e-09 73.1
4 TraesCS5B01G054700 chr5A 88.966 2320 158 45 843 3129 45295745 45293491 0.000000e+00 2776.0
5 TraesCS5B01G054700 chr5A 89.422 917 71 16 4134 5047 45291009 45290116 0.000000e+00 1133.0
6 TraesCS5B01G054700 chr5A 94.604 556 25 5 3498 4052 45291864 45291313 0.000000e+00 856.0
7 TraesCS5B01G054700 chr5A 92.023 514 35 4 5774 6282 45289326 45288814 0.000000e+00 717.0
8 TraesCS5B01G054700 chr5A 92.060 466 22 6 5155 5615 45289780 45289325 5.460000e-180 641.0
9 TraesCS5B01G054700 chr5A 95.304 362 17 0 3144 3505 45293559 45293198 5.620000e-160 575.0
10 TraesCS5B01G054700 chr5A 94.118 170 10 0 3336 3505 45292440 45292271 6.420000e-65 259.0
11 TraesCS5B01G054700 chr5A 94.118 136 6 2 686 821 45296416 45296283 8.490000e-49 206.0
12 TraesCS5B01G054700 chr5A 95.122 123 5 1 5043 5164 45290077 45289955 6.610000e-45 193.0
13 TraesCS5B01G054700 chr5A 91.736 121 10 0 271 391 45296549 45296429 1.110000e-37 169.0
14 TraesCS5B01G054700 chr5A 94.175 103 6 0 3502 3604 45292536 45292434 2.410000e-34 158.0
15 TraesCS5B01G054700 chr5A 100.000 33 0 0 6288 6320 409429350 409429382 1.940000e-05 62.1
16 TraesCS5B01G054700 chr5D 90.855 1356 68 15 715 2029 56948541 56947201 0.000000e+00 1766.0
17 TraesCS5B01G054700 chr5D 91.253 1189 67 16 2026 3212 56932384 56931231 0.000000e+00 1585.0
18 TraesCS5B01G054700 chr5D 93.051 921 56 7 4134 5048 56929904 56928986 0.000000e+00 1339.0
19 TraesCS5B01G054700 chr5D 93.881 572 28 5 5046 5612 56928941 56928372 0.000000e+00 856.0
20 TraesCS5B01G054700 chr5D 91.511 483 37 3 5803 6282 56928374 56927893 0.000000e+00 662.0
21 TraesCS5B01G054700 chr5D 94.627 335 18 0 3502 3836 56930705 56930371 2.670000e-143 520.0
22 TraesCS5B01G054700 chr5D 96.154 286 11 0 3835 4120 56930277 56929992 9.800000e-128 468.0
23 TraesCS5B01G054700 chr5D 94.505 182 10 0 3064 3245 56931296 56931115 1.370000e-71 281.0
24 TraesCS5B01G054700 chr5D 93.023 172 12 0 5612 5783 53583075 53583246 1.070000e-62 252.0
25 TraesCS5B01G054700 chr5D 94.531 128 7 0 3378 3505 56931118 56930991 1.420000e-46 198.0
26 TraesCS5B01G054700 chr5D 92.424 66 5 0 3144 3209 56931382 56931317 1.920000e-15 95.3
27 TraesCS5B01G054700 chr5D 97.917 48 1 0 6286 6333 111707129 111707082 4.150000e-12 84.2
28 TraesCS5B01G054700 chr5D 91.304 46 4 0 6287 6332 426280745 426280700 5.410000e-06 63.9
29 TraesCS5B01G054700 chr6B 96.000 275 10 1 392 666 337229068 337228795 4.590000e-121 446.0
30 TraesCS5B01G054700 chr6B 95.956 272 11 0 392 663 337225547 337225276 5.940000e-120 442.0
31 TraesCS5B01G054700 chr6B 95.122 164 8 0 5614 5777 94951335 94951172 6.420000e-65 259.0
32 TraesCS5B01G054700 chr6B 93.529 170 10 1 5610 5779 132353413 132353581 1.070000e-62 252.0
33 TraesCS5B01G054700 chr1B 98.788 165 2 0 5611 5775 652464931 652464767 1.760000e-75 294.0
34 TraesCS5B01G054700 chr1B 98.780 164 2 0 5612 5775 649336957 649337120 6.330000e-75 292.0
35 TraesCS5B01G054700 chr1B 78.182 275 50 10 4476 4746 572308413 572308145 4.010000e-37 167.0
36 TraesCS5B01G054700 chr1B 81.529 157 20 6 392 545 17742180 17742330 3.160000e-23 121.0
37 TraesCS5B01G054700 chr1B 81.111 90 14 2 5735 5823 202766600 202766687 1.160000e-07 69.4
38 TraesCS5B01G054700 chr1B 100.000 33 0 0 6288 6320 127384012 127384044 1.940000e-05 62.1
39 TraesCS5B01G054700 chrUn 94.798 173 8 1 5613 5784 141680745 141680917 1.070000e-67 268.0
40 TraesCS5B01G054700 chrUn 90.816 98 6 3 85 180 338411893 338411797 1.890000e-25 128.0
41 TraesCS5B01G054700 chr7B 96.273 161 6 0 509 669 688133792 688133952 1.380000e-66 265.0
42 TraesCS5B01G054700 chr7B 93.590 156 9 1 509 664 688130139 688130293 1.400000e-56 231.0
43 TraesCS5B01G054700 chr7B 86.607 112 10 4 86 193 744201391 744201281 1.140000e-22 119.0
44 TraesCS5B01G054700 chr7B 88.235 85 10 0 6347 6431 437208063 437207979 1.150000e-17 102.0
45 TraesCS5B01G054700 chr4D 80.912 351 52 15 4476 4817 111948170 111948514 4.970000e-66 263.0
46 TraesCS5B01G054700 chr4D 94.048 168 9 1 5612 5778 437295928 437295761 2.990000e-63 254.0
47 TraesCS5B01G054700 chr4D 86.813 91 12 0 6342 6432 95776348 95776258 1.150000e-17 102.0
48 TraesCS5B01G054700 chr6D 94.048 168 10 0 5610 5777 426106726 426106893 8.310000e-64 255.0
49 TraesCS5B01G054700 chr6D 83.654 104 16 1 6329 6432 155245110 155245008 5.330000e-16 97.1
50 TraesCS5B01G054700 chr6D 82.569 109 17 2 6325 6432 80721745 80721638 1.920000e-15 95.3
51 TraesCS5B01G054700 chr6D 80.734 109 16 5 469 576 63929128 63929024 5.370000e-11 80.5
52 TraesCS5B01G054700 chr6D 100.000 33 0 0 6288 6320 186308537 186308505 1.940000e-05 62.1
53 TraesCS5B01G054700 chr4A 93.529 170 11 0 5613 5782 517406633 517406464 2.990000e-63 254.0
54 TraesCS5B01G054700 chr4A 93.182 44 2 1 6277 6319 206683002 206683045 5.410000e-06 63.9
55 TraesCS5B01G054700 chr4A 100.000 33 0 0 6288 6320 574649285 574649317 1.940000e-05 62.1
56 TraesCS5B01G054700 chr4B 93.491 169 11 0 5613 5781 344463460 344463292 1.070000e-62 252.0
57 TraesCS5B01G054700 chr4B 85.149 101 15 0 6332 6432 667508750 667508850 3.190000e-18 104.0
58 TraesCS5B01G054700 chr4B 86.813 91 11 1 6325 6414 405645912 405645822 4.120000e-17 100.0
59 TraesCS5B01G054700 chr4B 83.495 103 17 0 6330 6432 637988075 637988177 5.330000e-16 97.1
60 TraesCS5B01G054700 chr4B 82.143 84 12 2 5741 5823 216584733 216584814 1.160000e-07 69.4
61 TraesCS5B01G054700 chr4B 82.143 84 12 2 5741 5823 349490631 349490550 1.160000e-07 69.4
62 TraesCS5B01G054700 chr3B 88.500 200 19 3 6077 6273 603441324 603441126 8.370000e-59 239.0
63 TraesCS5B01G054700 chr3B 87.952 166 9 5 509 663 283624440 283624605 1.110000e-42 185.0
64 TraesCS5B01G054700 chr3B 85.890 163 16 6 509 664 283605884 283606046 4.010000e-37 167.0
65 TraesCS5B01G054700 chr3B 90.476 105 8 2 78 180 373126121 373126017 3.140000e-28 137.0
66 TraesCS5B01G054700 chr3B 93.478 46 3 0 6288 6333 291052256 291052301 1.160000e-07 69.4
67 TraesCS5B01G054700 chr7D 89.157 166 8 7 509 664 166885158 166884993 1.420000e-46 198.0
68 TraesCS5B01G054700 chr7D 89.091 165 8 7 509 663 166881616 166881452 5.110000e-46 196.0
69 TraesCS5B01G054700 chr7D 91.753 97 6 2 86 180 30953113 30953209 4.060000e-27 134.0
70 TraesCS5B01G054700 chr7D 85.000 100 14 1 6330 6429 515397071 515396973 4.120000e-17 100.0
71 TraesCS5B01G054700 chr1D 78.755 273 48 10 4485 4750 423056446 423056177 2.390000e-39 174.0
72 TraesCS5B01G054700 chr1A 80.476 210 26 11 4586 4786 59130694 59130491 5.220000e-31 147.0
73 TraesCS5B01G054700 chr2D 76.174 298 54 13 4476 4763 11163273 11163563 2.430000e-29 141.0
74 TraesCS5B01G054700 chr2D 87.963 108 11 2 86 191 398306055 398306162 6.800000e-25 126.0
75 TraesCS5B01G054700 chr2D 82.979 94 8 8 509 597 523313376 523313466 1.930000e-10 78.7
76 TraesCS5B01G054700 chr2D 100.000 33 0 0 6288 6320 454570574 454570542 1.940000e-05 62.1
77 TraesCS5B01G054700 chr3D 90.816 98 6 3 85 180 511299114 511299018 1.890000e-25 128.0
78 TraesCS5B01G054700 chr3D 90.000 100 8 1 83 180 600092039 600092138 1.890000e-25 128.0
79 TraesCS5B01G054700 chr2B 89.109 101 9 2 86 184 462945966 462945866 2.440000e-24 124.0
80 TraesCS5B01G054700 chr2B 82.569 109 16 3 6325 6432 646064318 646064424 6.890000e-15 93.5
81 TraesCS5B01G054700 chr7A 86.207 116 12 4 69 180 457749306 457749421 8.790000e-24 122.0
82 TraesCS5B01G054700 chr3A 85.870 92 13 0 6341 6432 111823501 111823410 1.480000e-16 99.0
83 TraesCS5B01G054700 chr2A 100.000 31 0 0 6288 6318 418225057 418225087 2.520000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G054700 chr5B 59906186 59912643 6457 True 11889.000000 11889 100.000000 1 6458 1 chr5B.!!$R1 6457
1 TraesCS5B01G054700 chr5A 45288814 45296549 7735 True 698.454545 2776 92.877091 271 6282 11 chr5A.!!$R1 6011
2 TraesCS5B01G054700 chr5D 56947201 56948541 1340 True 1766.000000 1766 90.855000 715 2029 1 chr5D.!!$R1 1314
3 TraesCS5B01G054700 chr5D 56927893 56932384 4491 True 667.144444 1585 93.548556 2026 6282 9 chr5D.!!$R4 4256
4 TraesCS5B01G054700 chr6B 337225276 337229068 3792 True 444.000000 446 95.978000 392 666 2 chr6B.!!$R2 274
5 TraesCS5B01G054700 chr7B 688130139 688133952 3813 False 248.000000 265 94.931500 509 669 2 chr7B.!!$F1 160

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.031857 CACAAAAGCGGTCCATGCAA 59.968 50.000 0.00 0.0 33.85 4.08 F
38 39 0.031994 ACAAAAGCGGTCCATGCAAC 59.968 50.000 0.00 0.0 33.85 4.17 F
386 387 0.037046 CCGCGGTTGGTAGGTTTAGT 60.037 55.000 19.50 0.0 0.00 2.24 F
899 6036 0.247736 CTGAGTTCTGACCCCTTCCG 59.752 60.000 0.00 0.0 0.00 4.30 F
1639 6815 0.252197 GGCCTCTGGTACCAACGAAT 59.748 55.000 17.11 0.0 0.00 3.34 F
2662 7849 1.351017 TGGAGGTGGACTGTTGGATTC 59.649 52.381 0.00 0.0 0.00 2.52 F
3369 8639 0.970640 TCAAAGGTAGTAGCGGTGCA 59.029 50.000 5.29 0.0 0.00 4.57 F
4656 11602 1.199097 GTGGTTTGCGTGGATTGTAGG 59.801 52.381 0.00 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1277 6417 1.068194 CCTCCTGTGAAGACGTCTCAC 60.068 57.143 27.18 27.18 35.17 3.51 R
1283 6423 1.216710 GGCTCCTCCTGTGAAGACG 59.783 63.158 0.00 0.00 0.00 4.18 R
2299 7486 1.813753 CTACGGTTGTGCCATCCGG 60.814 63.158 21.15 0.00 46.94 5.14 R
2860 8047 0.317269 ATGCATCAACATAAGCGCGC 60.317 50.000 26.66 26.66 0.00 6.86 R
3369 8639 1.843368 TGAACTCGTCCTCCCGTATT 58.157 50.000 0.00 0.00 0.00 1.89 R
4594 11540 1.986882 AGAACAAGCCAAAGGTCCTG 58.013 50.000 0.00 0.00 0.00 3.86 R
4937 11885 0.390124 CCAGTGCAAGCAACCAACAT 59.610 50.000 0.00 0.00 0.00 2.71 R
6305 13495 0.037734 AAGGACGCGGGAGGAAATTT 59.962 50.000 12.47 0.00 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.945456 AGGGAGAAAGGGACAAAACAC 58.055 47.619 0.00 0.00 0.00 3.32
21 22 2.243736 AGGGAGAAAGGGACAAAACACA 59.756 45.455 0.00 0.00 0.00 3.72
22 23 3.028130 GGGAGAAAGGGACAAAACACAA 58.972 45.455 0.00 0.00 0.00 3.33
23 24 3.449377 GGGAGAAAGGGACAAAACACAAA 59.551 43.478 0.00 0.00 0.00 2.83
24 25 4.081365 GGGAGAAAGGGACAAAACACAAAA 60.081 41.667 0.00 0.00 0.00 2.44
25 26 5.109210 GGAGAAAGGGACAAAACACAAAAG 58.891 41.667 0.00 0.00 0.00 2.27
26 27 4.503910 AGAAAGGGACAAAACACAAAAGC 58.496 39.130 0.00 0.00 0.00 3.51
27 28 2.577449 AGGGACAAAACACAAAAGCG 57.423 45.000 0.00 0.00 0.00 4.68
28 29 1.136110 AGGGACAAAACACAAAAGCGG 59.864 47.619 0.00 0.00 0.00 5.52
29 30 1.134936 GGGACAAAACACAAAAGCGGT 60.135 47.619 0.00 0.00 0.00 5.68
30 31 2.190161 GGACAAAACACAAAAGCGGTC 58.810 47.619 0.00 0.00 0.00 4.79
31 32 2.190161 GACAAAACACAAAAGCGGTCC 58.810 47.619 0.00 0.00 0.00 4.46
32 33 1.546476 ACAAAACACAAAAGCGGTCCA 59.454 42.857 0.00 0.00 0.00 4.02
33 34 2.167487 ACAAAACACAAAAGCGGTCCAT 59.833 40.909 0.00 0.00 0.00 3.41
34 35 2.507339 AAACACAAAAGCGGTCCATG 57.493 45.000 0.00 0.00 0.00 3.66
35 36 0.031994 AACACAAAAGCGGTCCATGC 59.968 50.000 0.00 0.00 0.00 4.06
36 37 1.106351 ACACAAAAGCGGTCCATGCA 61.106 50.000 0.00 0.00 33.85 3.96
37 38 0.031857 CACAAAAGCGGTCCATGCAA 59.968 50.000 0.00 0.00 33.85 4.08
38 39 0.031994 ACAAAAGCGGTCCATGCAAC 59.968 50.000 0.00 0.00 33.85 4.17
39 40 0.667184 CAAAAGCGGTCCATGCAACC 60.667 55.000 0.00 5.61 33.85 3.77
40 41 1.815817 AAAAGCGGTCCATGCAACCC 61.816 55.000 9.26 3.86 32.89 4.11
41 42 2.713531 AAAGCGGTCCATGCAACCCT 62.714 55.000 9.26 5.65 32.89 4.34
42 43 3.443045 GCGGTCCATGCAACCCTG 61.443 66.667 9.26 0.00 32.89 4.45
43 44 2.350895 CGGTCCATGCAACCCTGA 59.649 61.111 9.26 0.00 32.89 3.86
44 45 1.303236 CGGTCCATGCAACCCTGAA 60.303 57.895 9.26 0.00 32.89 3.02
45 46 0.893270 CGGTCCATGCAACCCTGAAA 60.893 55.000 9.26 0.00 32.89 2.69
46 47 1.337118 GGTCCATGCAACCCTGAAAA 58.663 50.000 0.00 0.00 0.00 2.29
47 48 1.691434 GGTCCATGCAACCCTGAAAAA 59.309 47.619 0.00 0.00 0.00 1.94
48 49 2.547855 GGTCCATGCAACCCTGAAAAAC 60.548 50.000 0.00 0.00 0.00 2.43
49 50 2.102252 GTCCATGCAACCCTGAAAAACA 59.898 45.455 0.00 0.00 0.00 2.83
50 51 2.102252 TCCATGCAACCCTGAAAAACAC 59.898 45.455 0.00 0.00 0.00 3.32
51 52 2.158986 CCATGCAACCCTGAAAAACACA 60.159 45.455 0.00 0.00 0.00 3.72
52 53 3.529533 CATGCAACCCTGAAAAACACAA 58.470 40.909 0.00 0.00 0.00 3.33
53 54 3.685139 TGCAACCCTGAAAAACACAAA 57.315 38.095 0.00 0.00 0.00 2.83
54 55 4.213564 TGCAACCCTGAAAAACACAAAT 57.786 36.364 0.00 0.00 0.00 2.32
55 56 4.187694 TGCAACCCTGAAAAACACAAATC 58.812 39.130 0.00 0.00 0.00 2.17
56 57 4.081198 TGCAACCCTGAAAAACACAAATCT 60.081 37.500 0.00 0.00 0.00 2.40
57 58 4.507756 GCAACCCTGAAAAACACAAATCTC 59.492 41.667 0.00 0.00 0.00 2.75
58 59 4.937201 ACCCTGAAAAACACAAATCTCC 57.063 40.909 0.00 0.00 0.00 3.71
59 60 4.285863 ACCCTGAAAAACACAAATCTCCA 58.714 39.130 0.00 0.00 0.00 3.86
60 61 4.714308 ACCCTGAAAAACACAAATCTCCAA 59.286 37.500 0.00 0.00 0.00 3.53
61 62 5.163416 ACCCTGAAAAACACAAATCTCCAAG 60.163 40.000 0.00 0.00 0.00 3.61
62 63 5.068987 CCCTGAAAAACACAAATCTCCAAGA 59.931 40.000 0.00 0.00 0.00 3.02
63 64 6.239402 CCCTGAAAAACACAAATCTCCAAGAT 60.239 38.462 0.00 0.00 36.28 2.40
64 65 7.212274 CCTGAAAAACACAAATCTCCAAGATT 58.788 34.615 0.00 0.00 46.22 2.40
76 77 7.579761 AATCTCCAAGATTTTCATCTAAGGC 57.420 36.000 0.00 0.00 41.90 4.35
77 78 6.065976 TCTCCAAGATTTTCATCTAAGGCA 57.934 37.500 0.00 0.00 39.00 4.75
78 79 6.666678 TCTCCAAGATTTTCATCTAAGGCAT 58.333 36.000 0.00 0.00 39.00 4.40
79 80 7.805163 TCTCCAAGATTTTCATCTAAGGCATA 58.195 34.615 0.00 0.00 39.00 3.14
80 81 7.935755 TCTCCAAGATTTTCATCTAAGGCATAG 59.064 37.037 0.00 0.00 39.00 2.23
81 82 7.000472 TCCAAGATTTTCATCTAAGGCATAGG 59.000 38.462 0.00 0.00 39.00 2.57
82 83 7.000472 CCAAGATTTTCATCTAAGGCATAGGA 59.000 38.462 0.00 0.00 39.00 2.94
83 84 7.174599 CCAAGATTTTCATCTAAGGCATAGGAG 59.825 40.741 0.00 0.00 39.00 3.69
84 85 7.385894 AGATTTTCATCTAAGGCATAGGAGT 57.614 36.000 0.00 0.00 38.06 3.85
85 86 7.810260 AGATTTTCATCTAAGGCATAGGAGTT 58.190 34.615 0.00 0.00 38.06 3.01
86 87 8.938883 AGATTTTCATCTAAGGCATAGGAGTTA 58.061 33.333 0.00 0.00 38.06 2.24
87 88 8.910351 ATTTTCATCTAAGGCATAGGAGTTAC 57.090 34.615 0.00 0.00 32.09 2.50
88 89 7.676683 TTTCATCTAAGGCATAGGAGTTACT 57.323 36.000 0.00 0.00 32.09 2.24
89 90 6.902771 TCATCTAAGGCATAGGAGTTACTC 57.097 41.667 3.36 3.36 32.09 2.59
99 100 0.822811 GGAGTTACTCCCTCCGTTCC 59.177 60.000 20.11 0.00 44.36 3.62
100 101 1.553706 GAGTTACTCCCTCCGTTCCA 58.446 55.000 0.00 0.00 0.00 3.53
101 102 1.477295 GAGTTACTCCCTCCGTTCCAG 59.523 57.143 0.00 0.00 0.00 3.86
102 103 1.076677 AGTTACTCCCTCCGTTCCAGA 59.923 52.381 0.00 0.00 0.00 3.86
103 104 1.897802 GTTACTCCCTCCGTTCCAGAA 59.102 52.381 0.00 0.00 0.00 3.02
104 105 2.500504 GTTACTCCCTCCGTTCCAGAAT 59.499 50.000 0.00 0.00 0.00 2.40
105 106 2.544844 ACTCCCTCCGTTCCAGAATA 57.455 50.000 0.00 0.00 0.00 1.75
106 107 2.389715 ACTCCCTCCGTTCCAGAATAG 58.610 52.381 0.00 0.00 0.00 1.73
107 108 2.024273 ACTCCCTCCGTTCCAGAATAGA 60.024 50.000 0.00 0.00 0.00 1.98
108 109 3.235200 CTCCCTCCGTTCCAGAATAGAT 58.765 50.000 0.00 0.00 0.00 1.98
109 110 4.140994 ACTCCCTCCGTTCCAGAATAGATA 60.141 45.833 0.00 0.00 0.00 1.98
110 111 4.811498 TCCCTCCGTTCCAGAATAGATAA 58.189 43.478 0.00 0.00 0.00 1.75
111 112 4.587684 TCCCTCCGTTCCAGAATAGATAAC 59.412 45.833 0.00 0.00 0.00 1.89
112 113 4.262506 CCCTCCGTTCCAGAATAGATAACC 60.263 50.000 0.00 0.00 0.00 2.85
113 114 4.262506 CCTCCGTTCCAGAATAGATAACCC 60.263 50.000 0.00 0.00 0.00 4.11
114 115 4.291792 TCCGTTCCAGAATAGATAACCCA 58.708 43.478 0.00 0.00 0.00 4.51
115 116 4.717778 TCCGTTCCAGAATAGATAACCCAA 59.282 41.667 0.00 0.00 0.00 4.12
116 117 5.368523 TCCGTTCCAGAATAGATAACCCAAT 59.631 40.000 0.00 0.00 0.00 3.16
117 118 6.062095 CCGTTCCAGAATAGATAACCCAATT 58.938 40.000 0.00 0.00 0.00 2.32
118 119 6.546034 CCGTTCCAGAATAGATAACCCAATTT 59.454 38.462 0.00 0.00 0.00 1.82
119 120 7.068226 CCGTTCCAGAATAGATAACCCAATTTT 59.932 37.037 0.00 0.00 0.00 1.82
120 121 9.116067 CGTTCCAGAATAGATAACCCAATTTTA 57.884 33.333 0.00 0.00 0.00 1.52
157 158 9.975218 ATCAAAGTTAGTATAAAGTTGGGTCAT 57.025 29.630 0.00 0.00 0.00 3.06
158 159 9.444600 TCAAAGTTAGTATAAAGTTGGGTCATC 57.555 33.333 0.00 0.00 0.00 2.92
159 160 9.449719 CAAAGTTAGTATAAAGTTGGGTCATCT 57.550 33.333 0.00 0.00 0.00 2.90
171 172 7.153217 AGTTGGGTCATCTATTTTAAAACGG 57.847 36.000 1.97 0.00 0.00 4.44
172 173 6.943718 AGTTGGGTCATCTATTTTAAAACGGA 59.056 34.615 1.97 5.09 0.00 4.69
173 174 7.449086 AGTTGGGTCATCTATTTTAAAACGGAA 59.551 33.333 1.97 0.00 0.00 4.30
174 175 7.762588 TGGGTCATCTATTTTAAAACGGAAA 57.237 32.000 1.97 0.00 0.00 3.13
175 176 7.822658 TGGGTCATCTATTTTAAAACGGAAAG 58.177 34.615 1.97 3.04 0.00 2.62
176 177 7.666388 TGGGTCATCTATTTTAAAACGGAAAGA 59.334 33.333 1.97 2.62 0.00 2.52
177 178 8.182227 GGGTCATCTATTTTAAAACGGAAAGAG 58.818 37.037 1.97 0.00 0.00 2.85
178 179 8.727910 GGTCATCTATTTTAAAACGGAAAGAGT 58.272 33.333 1.97 0.00 0.00 3.24
188 189 9.672086 TTTAAAACGGAAAGAGTAAATGTGATG 57.328 29.630 0.00 0.00 0.00 3.07
189 190 7.504924 AAAACGGAAAGAGTAAATGTGATGA 57.495 32.000 0.00 0.00 0.00 2.92
190 191 6.727824 AACGGAAAGAGTAAATGTGATGAG 57.272 37.500 0.00 0.00 0.00 2.90
191 192 6.037786 ACGGAAAGAGTAAATGTGATGAGA 57.962 37.500 0.00 0.00 0.00 3.27
192 193 6.464222 ACGGAAAGAGTAAATGTGATGAGAA 58.536 36.000 0.00 0.00 0.00 2.87
193 194 7.106239 ACGGAAAGAGTAAATGTGATGAGAAT 58.894 34.615 0.00 0.00 0.00 2.40
194 195 7.607991 ACGGAAAGAGTAAATGTGATGAGAATT 59.392 33.333 0.00 0.00 0.00 2.17
195 196 9.098355 CGGAAAGAGTAAATGTGATGAGAATTA 57.902 33.333 0.00 0.00 0.00 1.40
197 198 9.928236 GAAAGAGTAAATGTGATGAGAATTAGC 57.072 33.333 0.00 0.00 0.00 3.09
198 199 9.678260 AAAGAGTAAATGTGATGAGAATTAGCT 57.322 29.630 0.00 0.00 0.00 3.32
236 237 9.613428 TTAAATAGTGGTTATCTTCATGTCTGG 57.387 33.333 0.00 0.00 0.00 3.86
237 238 4.494091 AGTGGTTATCTTCATGTCTGGG 57.506 45.455 0.00 0.00 0.00 4.45
238 239 4.104086 AGTGGTTATCTTCATGTCTGGGA 58.896 43.478 0.00 0.00 0.00 4.37
239 240 4.723789 AGTGGTTATCTTCATGTCTGGGAT 59.276 41.667 0.00 0.00 0.00 3.85
240 241 5.192522 AGTGGTTATCTTCATGTCTGGGATT 59.807 40.000 0.00 0.00 0.00 3.01
241 242 5.888161 GTGGTTATCTTCATGTCTGGGATTT 59.112 40.000 0.00 0.00 0.00 2.17
242 243 6.038714 GTGGTTATCTTCATGTCTGGGATTTC 59.961 42.308 0.00 0.00 0.00 2.17
243 244 6.069440 TGGTTATCTTCATGTCTGGGATTTCT 60.069 38.462 0.00 0.00 0.00 2.52
244 245 6.261826 GGTTATCTTCATGTCTGGGATTTCTG 59.738 42.308 0.00 0.00 0.00 3.02
245 246 4.916041 TCTTCATGTCTGGGATTTCTGT 57.084 40.909 0.00 0.00 0.00 3.41
246 247 5.246981 TCTTCATGTCTGGGATTTCTGTT 57.753 39.130 0.00 0.00 0.00 3.16
247 248 6.373005 TCTTCATGTCTGGGATTTCTGTTA 57.627 37.500 0.00 0.00 0.00 2.41
248 249 6.778821 TCTTCATGTCTGGGATTTCTGTTAA 58.221 36.000 0.00 0.00 0.00 2.01
249 250 7.230747 TCTTCATGTCTGGGATTTCTGTTAAA 58.769 34.615 0.00 0.00 0.00 1.52
250 251 7.723616 TCTTCATGTCTGGGATTTCTGTTAAAA 59.276 33.333 0.00 0.00 0.00 1.52
251 252 7.214467 TCATGTCTGGGATTTCTGTTAAAAC 57.786 36.000 0.00 0.00 0.00 2.43
252 253 7.004086 TCATGTCTGGGATTTCTGTTAAAACT 58.996 34.615 0.00 0.00 0.00 2.66
253 254 8.160765 TCATGTCTGGGATTTCTGTTAAAACTA 58.839 33.333 0.00 0.00 0.00 2.24
254 255 8.792633 CATGTCTGGGATTTCTGTTAAAACTAA 58.207 33.333 0.00 0.00 0.00 2.24
255 256 8.391075 TGTCTGGGATTTCTGTTAAAACTAAG 57.609 34.615 0.00 0.00 0.00 2.18
256 257 7.996644 TGTCTGGGATTTCTGTTAAAACTAAGT 59.003 33.333 0.00 0.00 0.00 2.24
257 258 8.847196 GTCTGGGATTTCTGTTAAAACTAAGTT 58.153 33.333 0.00 0.00 0.00 2.66
258 259 9.416284 TCTGGGATTTCTGTTAAAACTAAGTTT 57.584 29.630 0.00 0.00 37.34 2.66
289 290 7.927048 ACGAAGCTGTTAAAACTAAGTTGATT 58.073 30.769 0.00 0.00 0.00 2.57
292 293 9.730420 GAAGCTGTTAAAACTAAGTTGATTCAA 57.270 29.630 0.00 0.00 0.00 2.69
336 337 2.203015 CGTCAATCCCCGGCGAAT 60.203 61.111 9.30 0.00 0.00 3.34
386 387 0.037046 CCGCGGTTGGTAGGTTTAGT 60.037 55.000 19.50 0.00 0.00 2.24
401 402 5.246307 AGGTTTAGTTTAGTGTCAGCATCC 58.754 41.667 0.00 0.00 0.00 3.51
464 465 1.435515 GTCGGAGGAGCAGCTACAG 59.564 63.158 7.59 0.00 0.00 2.74
581 5196 0.250513 CAGTTCCCCTTCCTCTTCCG 59.749 60.000 0.00 0.00 0.00 4.30
584 5199 1.073444 GTTCCCCTTCCTCTTCCGTTT 59.927 52.381 0.00 0.00 0.00 3.60
598 5213 5.235516 TCTTCCGTTTCTCTTGTAATCACC 58.764 41.667 0.00 0.00 0.00 4.02
670 5285 5.906772 ATCTGGTACCTAACATTTAGGGG 57.093 43.478 14.36 0.00 39.00 4.79
671 5286 4.702196 TCTGGTACCTAACATTTAGGGGT 58.298 43.478 14.36 0.08 39.00 4.95
672 5287 5.102967 TCTGGTACCTAACATTTAGGGGTT 58.897 41.667 14.36 0.00 39.00 4.11
673 5288 5.045432 TCTGGTACCTAACATTTAGGGGTTG 60.045 44.000 14.36 3.52 39.00 3.77
674 5289 4.850963 TGGTACCTAACATTTAGGGGTTGA 59.149 41.667 14.36 0.00 39.00 3.18
675 5290 5.188434 GGTACCTAACATTTAGGGGTTGAC 58.812 45.833 14.99 6.04 39.00 3.18
676 5291 5.280624 GGTACCTAACATTTAGGGGTTGACA 60.281 44.000 14.99 0.00 39.00 3.58
677 5292 5.530176 ACCTAACATTTAGGGGTTGACAT 57.470 39.130 14.99 0.00 39.00 3.06
678 5293 5.899278 ACCTAACATTTAGGGGTTGACATT 58.101 37.500 14.99 0.00 39.00 2.71
679 5294 6.319715 ACCTAACATTTAGGGGTTGACATTT 58.680 36.000 14.99 0.00 39.00 2.32
680 5295 7.471890 ACCTAACATTTAGGGGTTGACATTTA 58.528 34.615 14.99 0.00 39.00 1.40
681 5296 7.951245 ACCTAACATTTAGGGGTTGACATTTAA 59.049 33.333 14.99 0.00 39.00 1.52
682 5297 8.808092 CCTAACATTTAGGGGTTGACATTTAAA 58.192 33.333 4.29 0.00 0.00 1.52
718 5333 4.562143 CCTGGCAGCTTTTCAATTTTAGCT 60.562 41.667 9.56 0.00 44.34 3.32
724 5339 6.201615 GCAGCTTTTCAATTTTAGCTCAAGTT 59.798 34.615 0.00 0.00 41.76 2.66
822 5437 4.548991 ACGATTCGCCCGATATCTATAC 57.451 45.455 5.86 0.00 0.00 1.47
825 5440 3.777465 TTCGCCCGATATCTATACTGC 57.223 47.619 0.34 0.00 0.00 4.40
873 6010 2.638480 TTTCCTCCATATGAAGGCCG 57.362 50.000 2.42 0.00 0.00 6.13
881 6018 3.646162 TCCATATGAAGGCCGTGTATTCT 59.354 43.478 3.65 0.00 0.00 2.40
884 6021 2.672961 TGAAGGCCGTGTATTCTGAG 57.327 50.000 0.00 0.00 0.00 3.35
885 6022 1.899814 TGAAGGCCGTGTATTCTGAGT 59.100 47.619 0.00 0.00 0.00 3.41
889 6026 2.093973 AGGCCGTGTATTCTGAGTTCTG 60.094 50.000 0.00 0.00 0.00 3.02
890 6027 2.094182 GGCCGTGTATTCTGAGTTCTGA 60.094 50.000 0.00 0.00 0.00 3.27
891 6028 2.924290 GCCGTGTATTCTGAGTTCTGAC 59.076 50.000 0.00 0.00 0.00 3.51
892 6029 3.512680 CCGTGTATTCTGAGTTCTGACC 58.487 50.000 0.00 0.00 0.00 4.02
893 6030 3.512680 CGTGTATTCTGAGTTCTGACCC 58.487 50.000 0.00 0.00 0.00 4.46
894 6031 3.676324 CGTGTATTCTGAGTTCTGACCCC 60.676 52.174 0.00 0.00 0.00 4.95
895 6032 3.515901 GTGTATTCTGAGTTCTGACCCCT 59.484 47.826 0.00 0.00 0.00 4.79
896 6033 4.020128 GTGTATTCTGAGTTCTGACCCCTT 60.020 45.833 0.00 0.00 0.00 3.95
897 6034 3.990959 ATTCTGAGTTCTGACCCCTTC 57.009 47.619 0.00 0.00 0.00 3.46
898 6035 1.645710 TCTGAGTTCTGACCCCTTCC 58.354 55.000 0.00 0.00 0.00 3.46
899 6036 0.247736 CTGAGTTCTGACCCCTTCCG 59.752 60.000 0.00 0.00 0.00 4.30
900 6037 1.192146 TGAGTTCTGACCCCTTCCGG 61.192 60.000 0.00 0.00 0.00 5.14
1005 6145 3.822192 CGACCGGCGGAGATGTCA 61.822 66.667 35.78 0.00 36.03 3.58
1011 6151 2.105128 GCGGAGATGTCAGGGTCG 59.895 66.667 0.00 0.00 0.00 4.79
1019 6159 3.391382 GTCAGGGTCGGGGTCCAG 61.391 72.222 0.00 0.00 0.00 3.86
1073 6213 2.034066 CAACACATCGCCCCCACT 59.966 61.111 0.00 0.00 0.00 4.00
1095 6235 4.796231 CCTCCGAACCCGAGCACG 62.796 72.222 0.00 0.00 38.22 5.34
1096 6236 4.052229 CTCCGAACCCGAGCACGT 62.052 66.667 2.18 0.00 38.22 4.49
1244 6384 2.405594 CGCGAGGACGAAGAGGAG 59.594 66.667 0.00 0.00 42.66 3.69
1277 6417 0.945099 TCGGAATCGGAGTCAGATCG 59.055 55.000 6.22 7.07 36.95 3.69
1283 6423 1.370609 TCGGAGTCAGATCGTGAGAC 58.629 55.000 0.00 3.47 46.97 3.36
1439 6591 1.648720 CCGCTGTGGCCAAATATCG 59.351 57.895 7.24 6.17 34.44 2.92
1488 6640 9.430623 GAGAAGCTAGGTATCCTATTTTGATTC 57.569 37.037 0.00 0.70 35.36 2.52
1489 6641 9.165057 AGAAGCTAGGTATCCTATTTTGATTCT 57.835 33.333 0.00 7.17 35.36 2.40
1533 6705 6.662414 TCCATCATTCAACGTTATTCACTC 57.338 37.500 0.00 0.00 0.00 3.51
1639 6815 0.252197 GGCCTCTGGTACCAACGAAT 59.748 55.000 17.11 0.00 0.00 3.34
1753 6929 8.572185 TCTTATATGTCTCTGTCACTCTATTGC 58.428 37.037 0.00 0.00 0.00 3.56
1772 6948 9.177608 TCTATTGCATAGAAGTTGCTTGTTAAT 57.822 29.630 0.00 0.00 38.85 1.40
1787 6963 5.220529 GCTTGTTAATTACGGTCAGCGTATT 60.221 40.000 10.42 3.81 0.00 1.89
1847 7023 8.606602 CATTGTTGTCAATCGAGATGAAGATAA 58.393 33.333 5.36 3.47 41.66 1.75
1962 7138 8.228464 GCTAAGGTAAAAGTGATGTTCAACTAC 58.772 37.037 0.00 0.00 0.00 2.73
1974 7150 7.495934 GTGATGTTCAACTACCATGTTAGCTAT 59.504 37.037 0.00 0.00 0.00 2.97
1975 7151 8.700973 TGATGTTCAACTACCATGTTAGCTATA 58.299 33.333 0.00 0.00 0.00 1.31
1976 7152 8.888579 ATGTTCAACTACCATGTTAGCTATAC 57.111 34.615 0.00 0.00 0.00 1.47
1987 7166 9.042008 ACCATGTTAGCTATACAAAATACTTCG 57.958 33.333 11.18 0.00 0.00 3.79
2038 7217 8.533569 TGGAGACAATATATGTACTTCTCACA 57.466 34.615 0.00 0.00 44.12 3.58
2120 7305 7.466746 TTCGCGGTATAACTTATATTACCCT 57.533 36.000 6.13 0.00 0.00 4.34
2185 7370 6.548993 TGTTGCTTTATCATGTGGCCAATATA 59.451 34.615 7.24 0.00 0.00 0.86
2221 7408 8.684386 TTGACTTAAATATCAAGTGTTGGACA 57.316 30.769 7.26 0.00 36.38 4.02
2222 7409 8.684386 TGACTTAAATATCAAGTGTTGGACAA 57.316 30.769 7.26 0.00 36.38 3.18
2275 7462 9.817809 ATTTTAGCTGTTTCTAATCGACTATCA 57.182 29.630 0.00 0.00 0.00 2.15
2299 7486 9.005777 TCACATTTTAGGTTATTGTTCACCTAC 57.994 33.333 0.00 0.00 43.97 3.18
2326 7513 3.196901 TGGCACAACCGTAGATAGTCAAT 59.803 43.478 0.00 0.00 43.94 2.57
2353 7540 8.387354 TGATGTACTTTAGCAAACATTATGACG 58.613 33.333 0.00 0.00 32.87 4.35
2363 7550 4.380841 AACATTATGACGTCGCCTTCTA 57.619 40.909 11.62 0.00 0.00 2.10
2373 7560 3.630769 ACGTCGCCTTCTATGAGATTACA 59.369 43.478 0.00 0.00 0.00 2.41
2378 7565 4.520874 CGCCTTCTATGAGATTACAGGAGA 59.479 45.833 0.00 0.00 0.00 3.71
2391 7578 7.341805 AGATTACAGGAGATTTACACTTGCAT 58.658 34.615 0.00 0.00 0.00 3.96
2445 7632 3.187637 GCCGTGAAGCATTTGTGTTAGTA 59.812 43.478 0.00 0.00 0.00 1.82
2455 7642 6.326583 AGCATTTGTGTTAGTAGCTAGGGATA 59.673 38.462 0.00 0.00 0.00 2.59
2662 7849 1.351017 TGGAGGTGGACTGTTGGATTC 59.649 52.381 0.00 0.00 0.00 2.52
2762 7949 7.715657 AGTGTTCAGCATTGTTGAGAAAATTA 58.284 30.769 3.37 0.00 0.00 1.40
2771 7958 7.755373 GCATTGTTGAGAAAATTAGGGTAAGAC 59.245 37.037 0.00 0.00 0.00 3.01
2772 7959 9.014297 CATTGTTGAGAAAATTAGGGTAAGACT 57.986 33.333 0.00 0.00 0.00 3.24
2838 8025 4.194640 TGATGCTTTCTCTGGATGTTAGC 58.805 43.478 0.00 0.00 0.00 3.09
2845 8032 3.538591 TCTCTGGATGTTAGCAATGCTG 58.461 45.455 19.25 0.00 40.10 4.41
2850 8037 4.081406 TGGATGTTAGCAATGCTGTCTTT 58.919 39.130 19.25 0.00 40.10 2.52
2860 8047 2.987413 TGCTGTCTTTTAATGTGGCG 57.013 45.000 0.00 0.00 0.00 5.69
2881 8068 1.661178 CGCGCTTATGTTGATGCATCC 60.661 52.381 23.67 9.97 0.00 3.51
2949 8136 3.908103 ACTAGGACTCTGCTTTGGGTAAA 59.092 43.478 0.00 0.00 0.00 2.01
2954 8141 4.254492 GACTCTGCTTTGGGTAAACTAGG 58.746 47.826 0.00 0.00 0.00 3.02
3083 8353 6.903419 GCATTACTCTGCTTTGACTAAACTT 58.097 36.000 0.00 0.00 39.12 2.66
3093 8363 7.584987 TGCTTTGACTAAACTTAAAGAGCATC 58.415 34.615 0.00 0.00 33.18 3.91
3101 8371 4.851639 ACTTAAAGAGCATCACATCCCT 57.148 40.909 0.00 0.00 37.82 4.20
3103 8373 5.574188 ACTTAAAGAGCATCACATCCCTTT 58.426 37.500 0.00 0.00 37.82 3.11
3104 8374 5.416952 ACTTAAAGAGCATCACATCCCTTTG 59.583 40.000 0.00 0.00 37.82 2.77
3135 8405 7.400599 AACTGATGCATACAATTCAGTTGAT 57.599 32.000 23.52 6.55 46.74 2.57
3199 8469 2.425143 TCCCCTTGATCATCAACTGC 57.575 50.000 0.00 0.00 32.21 4.40
3215 8485 4.215185 TCAACTGCTGCATACAAATCGAAA 59.785 37.500 1.31 0.00 0.00 3.46
3241 8511 5.555017 ACTACGACTTGTCCTACTCAACTA 58.445 41.667 0.00 0.00 0.00 2.24
3263 8533 2.829120 GGACTAGGACTCTGCTTTGACT 59.171 50.000 0.00 0.00 0.00 3.41
3272 8542 5.527582 GGACTCTGCTTTGACTTTTACAGAA 59.472 40.000 0.00 0.00 34.05 3.02
3281 8551 4.365723 TGACTTTTACAGAACCGACTCAC 58.634 43.478 0.00 0.00 0.00 3.51
3316 8586 6.650807 TCTTTAATCAAGCTAGACTGTTGTGG 59.349 38.462 0.00 0.00 31.70 4.17
3344 8614 5.439721 AGTAAGCCATGATGTGAATGCTTA 58.560 37.500 8.38 8.38 0.00 3.09
3369 8639 0.970640 TCAAAGGTAGTAGCGGTGCA 59.029 50.000 5.29 0.00 0.00 4.57
3399 8669 2.362397 GGACGAGTTCATCCTCTGCATA 59.638 50.000 0.00 0.00 31.75 3.14
3473 8743 8.814448 AGAAATTAGAGGGATAGGGATTAACA 57.186 34.615 0.00 0.00 0.00 2.41
3486 8756 6.206180 AGGGATTAACAATAGGAAGATGGG 57.794 41.667 0.00 0.00 0.00 4.00
3539 9487 2.081462 ACCTTATGCTAACAACGTGGC 58.919 47.619 0.00 0.00 0.00 5.01
3549 10172 5.048364 TGCTAACAACGTGGCTTCATATTTT 60.048 36.000 0.00 0.00 0.00 1.82
3553 10176 4.082787 ACAACGTGGCTTCATATTTTGGAG 60.083 41.667 0.00 0.00 33.58 3.86
3580 10203 8.106247 ACATTTGGTTCGAATTACAACTATGT 57.894 30.769 16.37 16.37 43.74 2.29
3621 10245 8.474025 CCTGAATGCAATATACCCTGTTTTAAA 58.526 33.333 0.00 0.00 0.00 1.52
3718 10342 4.189231 GTTGGACTTATTAGGCATGTCGT 58.811 43.478 0.00 0.00 0.00 4.34
3906 10625 1.496429 CTTGGCATTAGAGTGGGGGAT 59.504 52.381 0.00 0.00 0.00 3.85
3921 10640 6.682537 AGTGGGGGATGTTATTTTATCATGT 58.317 36.000 0.00 0.00 0.00 3.21
4109 10828 4.789012 AGTTGATGTGCAGGTAAAATGG 57.211 40.909 0.00 0.00 0.00 3.16
4113 10832 4.276642 TGATGTGCAGGTAAAATGGCATA 58.723 39.130 0.00 0.00 38.68 3.14
4114 10833 4.894705 TGATGTGCAGGTAAAATGGCATAT 59.105 37.500 0.00 0.00 40.15 1.78
4154 11095 7.297229 GGCAGAAAAGAACTCATAAGTCTAC 57.703 40.000 0.00 0.00 33.48 2.59
4240 11181 3.068307 CCTTACATCCTCTACGGTCCAAG 59.932 52.174 0.00 0.00 0.00 3.61
4370 11316 6.403309 GGGTTCTACCTTGATTTAAAAGCTCG 60.403 42.308 0.00 0.00 38.64 5.03
4385 11331 1.827344 AGCTCGATGAAGATGGACACA 59.173 47.619 0.00 0.00 0.00 3.72
4435 11381 6.962182 AGGGACTCTTTGATTCACATGATTA 58.038 36.000 0.00 0.00 0.00 1.75
4438 11384 7.201679 GGGACTCTTTGATTCACATGATTACAG 60.202 40.741 0.00 0.00 0.00 2.74
4441 11387 8.944029 ACTCTTTGATTCACATGATTACAGAAG 58.056 33.333 0.00 0.00 0.00 2.85
4470 11416 1.597742 ACGATAGGATTGCATGTGCC 58.402 50.000 2.07 0.00 40.07 5.01
4496 11442 3.947910 ATCTGCAGAATTGGGTGTTTG 57.052 42.857 22.50 0.00 0.00 2.93
4541 11487 5.231357 CGCAGAAATCATGAAAATGATGGTG 59.769 40.000 0.00 2.58 40.81 4.17
4605 11551 4.487714 TTATGCTACTCAGGACCTTTGG 57.512 45.455 0.00 0.00 0.00 3.28
4656 11602 1.199097 GTGGTTTGCGTGGATTGTAGG 59.801 52.381 0.00 0.00 0.00 3.18
4692 11639 4.788075 TCCTATGAAACTCAATCCAAGGGA 59.212 41.667 0.00 0.00 35.55 4.20
4804 11752 8.429237 TGCTTTCCCTTATTTTCCTTTGAATA 57.571 30.769 0.00 0.00 0.00 1.75
4822 11770 6.097915 TGAATATAAGAGGCCCTAAGTTCG 57.902 41.667 0.00 0.00 0.00 3.95
4833 11781 5.125578 AGGCCCTAAGTTCGAATCAAAATTC 59.874 40.000 0.00 0.00 38.34 2.17
4877 11825 6.148811 ACATACAATGTTTGAACGGTCTAAGG 59.851 38.462 10.65 0.00 41.63 2.69
4937 11885 3.430042 ACCTACTGTGGTCTCGAACTA 57.570 47.619 0.00 0.00 34.86 2.24
4953 11901 3.308530 GAACTATGTTGGTTGCTTGCAC 58.691 45.455 0.00 0.00 0.00 4.57
4957 11905 1.592400 GTTGGTTGCTTGCACTGGC 60.592 57.895 0.00 0.00 41.68 4.85
5068 12063 6.652062 TGTGATATTCTATGCATTGTGCCTAG 59.348 38.462 3.54 7.62 44.23 3.02
5095 12090 3.133003 GTGACTAGGTGACATATGTGCCT 59.867 47.826 23.91 23.91 35.27 4.75
5160 12155 0.981183 TGCACTTACCACCCCTACAG 59.019 55.000 0.00 0.00 0.00 2.74
5176 12355 1.402787 ACAGCCAAACAACCCTTCAG 58.597 50.000 0.00 0.00 0.00 3.02
5216 12398 4.780554 TCCCACTATGTGAAGGTGTTGATA 59.219 41.667 0.00 0.00 35.23 2.15
5232 12414 6.344936 GGTGTTGATATTTTATCAATTGCGCG 60.345 38.462 0.00 0.00 39.80 6.86
5236 12418 7.830217 TGATATTTTATCAATTGCGCGTAAC 57.170 32.000 12.98 0.00 0.00 2.50
5498 12681 7.444629 TTCTGTATCATCGTACTACATACCC 57.555 40.000 0.00 0.00 0.00 3.69
5501 12684 6.776744 TGTATCATCGTACTACATACCCTCT 58.223 40.000 0.00 0.00 0.00 3.69
5512 12695 7.490657 ACTACATACCCTCTTTTGTGTATCA 57.509 36.000 0.00 0.00 0.00 2.15
5586 12770 6.586344 TCAATTAGGAGCCTTTGTCTATCTG 58.414 40.000 0.00 0.00 0.00 2.90
5590 12774 2.832563 GAGCCTTTGTCTATCTGCTCC 58.167 52.381 0.00 0.00 39.36 4.70
5626 12810 5.503662 GTAGCTTACTACTCCCTCTGTTC 57.496 47.826 0.00 0.00 44.61 3.18
5627 12811 3.367321 AGCTTACTACTCCCTCTGTTCC 58.633 50.000 0.00 0.00 0.00 3.62
5628 12812 3.011934 AGCTTACTACTCCCTCTGTTCCT 59.988 47.826 0.00 0.00 0.00 3.36
5629 12813 4.230041 AGCTTACTACTCCCTCTGTTCCTA 59.770 45.833 0.00 0.00 0.00 2.94
5630 12814 4.954826 GCTTACTACTCCCTCTGTTCCTAA 59.045 45.833 0.00 0.00 0.00 2.69
5631 12815 5.421374 GCTTACTACTCCCTCTGTTCCTAAA 59.579 44.000 0.00 0.00 0.00 1.85
5632 12816 6.098552 GCTTACTACTCCCTCTGTTCCTAAAT 59.901 42.308 0.00 0.00 0.00 1.40
5633 12817 7.287235 GCTTACTACTCCCTCTGTTCCTAAATA 59.713 40.741 0.00 0.00 0.00 1.40
5634 12818 9.369672 CTTACTACTCCCTCTGTTCCTAAATAT 57.630 37.037 0.00 0.00 0.00 1.28
5637 12821 9.369672 ACTACTCCCTCTGTTCCTAAATATAAG 57.630 37.037 0.00 0.00 0.00 1.73
5638 12822 9.369672 CTACTCCCTCTGTTCCTAAATATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
5639 12823 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
5640 12824 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
5641 12825 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
5642 12826 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
5643 12827 9.907229 CCCTCTGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
5718 12902 9.214953 GAGTGTAGATTTATTCATTTTGCTTCG 57.785 33.333 0.00 0.00 0.00 3.79
5719 12903 8.730680 AGTGTAGATTTATTCATTTTGCTTCGT 58.269 29.630 0.00 0.00 0.00 3.85
5720 12904 9.982291 GTGTAGATTTATTCATTTTGCTTCGTA 57.018 29.630 0.00 0.00 0.00 3.43
5727 12911 9.982291 TTTATTCATTTTGCTTCGTATGTAGTC 57.018 29.630 0.00 0.00 0.00 2.59
5728 12912 6.417191 TTCATTTTGCTTCGTATGTAGTCC 57.583 37.500 0.00 0.00 0.00 3.85
5729 12913 5.483811 TCATTTTGCTTCGTATGTAGTCCA 58.516 37.500 0.00 0.00 0.00 4.02
5730 12914 6.112734 TCATTTTGCTTCGTATGTAGTCCAT 58.887 36.000 0.00 0.00 37.58 3.41
5731 12915 7.269316 TCATTTTGCTTCGTATGTAGTCCATA 58.731 34.615 0.00 0.00 34.86 2.74
5732 12916 7.438160 TCATTTTGCTTCGTATGTAGTCCATAG 59.562 37.037 0.00 0.00 36.71 2.23
5733 12917 5.847111 TTGCTTCGTATGTAGTCCATAGT 57.153 39.130 0.00 0.00 36.71 2.12
5734 12918 5.183014 TGCTTCGTATGTAGTCCATAGTG 57.817 43.478 0.00 0.00 36.71 2.74
5735 12919 4.643334 TGCTTCGTATGTAGTCCATAGTGT 59.357 41.667 0.00 0.00 36.71 3.55
5736 12920 5.824097 TGCTTCGTATGTAGTCCATAGTGTA 59.176 40.000 0.00 0.00 36.71 2.90
5737 12921 6.319405 TGCTTCGTATGTAGTCCATAGTGTAA 59.681 38.462 0.00 0.00 36.71 2.41
5738 12922 7.013942 TGCTTCGTATGTAGTCCATAGTGTAAT 59.986 37.037 0.00 0.00 36.71 1.89
5739 12923 7.537991 GCTTCGTATGTAGTCCATAGTGTAATC 59.462 40.741 0.00 0.00 36.71 1.75
5740 12924 8.687292 TTCGTATGTAGTCCATAGTGTAATCT 57.313 34.615 0.00 0.00 36.71 2.40
5741 12925 8.320396 TCGTATGTAGTCCATAGTGTAATCTC 57.680 38.462 0.00 0.00 36.71 2.75
5742 12926 8.155510 TCGTATGTAGTCCATAGTGTAATCTCT 58.844 37.037 0.00 0.00 36.71 3.10
5743 12927 9.433153 CGTATGTAGTCCATAGTGTAATCTCTA 57.567 37.037 0.00 0.00 36.71 2.43
5769 12953 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
5770 12954 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5771 12955 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5772 12956 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5773 12957 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
5774 12958 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
5775 12959 7.954620 ACTTATATTTAGGAACGGAGGGAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
5776 12960 9.471702 CTTATATTTAGGAACGGAGGGAGTATA 57.528 37.037 0.00 0.00 0.00 1.47
5778 12962 6.607004 ATTTAGGAACGGAGGGAGTATATG 57.393 41.667 0.00 0.00 0.00 1.78
5779 12963 3.897657 AGGAACGGAGGGAGTATATGA 57.102 47.619 0.00 0.00 0.00 2.15
5780 12964 4.405756 AGGAACGGAGGGAGTATATGAT 57.594 45.455 0.00 0.00 0.00 2.45
5841 13025 3.766051 GGGCAGATGTTTCCTCTTCAATT 59.234 43.478 0.00 0.00 0.00 2.32
5974 13160 5.008613 GCTAGTTGAACCAAGTGAAATGACA 59.991 40.000 0.00 0.00 0.00 3.58
6069 13256 2.631160 TGGGCGGAAGTATTGTATGG 57.369 50.000 0.00 0.00 0.00 2.74
6074 13261 2.221055 GCGGAAGTATTGTATGGAAGCG 59.779 50.000 0.00 0.00 0.00 4.68
6133 13321 4.705110 ACATGGTTGTGCAGCCTATATA 57.295 40.909 6.62 0.00 33.85 0.86
6134 13322 5.246981 ACATGGTTGTGCAGCCTATATAT 57.753 39.130 6.62 0.00 33.85 0.86
6168 13356 1.276138 CCCTTTCTTCAATGTTGCCCC 59.724 52.381 0.00 0.00 0.00 5.80
6181 13369 7.832769 TCAATGTTGCCCCTTAATTTAGTTAC 58.167 34.615 0.00 0.00 0.00 2.50
6229 13417 7.993183 ACCTCATCGTGTTCTATGGATTTATTT 59.007 33.333 0.00 0.00 0.00 1.40
6232 13420 6.935741 TCGTGTTCTATGGATTTATTTGGG 57.064 37.500 0.00 0.00 0.00 4.12
6297 13487 3.845781 TCTAAGGACATCTCCAATGGC 57.154 47.619 0.00 0.00 39.39 4.40
6298 13488 3.114606 TCTAAGGACATCTCCAATGGCA 58.885 45.455 0.00 0.00 39.39 4.92
6299 13489 2.905415 AAGGACATCTCCAATGGCAA 57.095 45.000 0.00 0.00 39.39 4.52
6300 13490 2.134789 AGGACATCTCCAATGGCAAC 57.865 50.000 0.00 0.00 39.39 4.17
6301 13491 1.106285 GGACATCTCCAATGGCAACC 58.894 55.000 0.00 0.00 36.42 3.77
6302 13492 1.616725 GGACATCTCCAATGGCAACCA 60.617 52.381 0.00 0.00 36.42 3.67
6303 13493 1.747355 GACATCTCCAATGGCAACCAG 59.253 52.381 0.00 0.00 36.75 4.00
6304 13494 0.458669 CATCTCCAATGGCAACCAGC 59.541 55.000 0.00 0.00 44.65 4.85
6315 13505 2.084610 GCAACCAGCAAATTTCCTCC 57.915 50.000 0.00 0.00 44.79 4.30
6316 13506 1.338105 GCAACCAGCAAATTTCCTCCC 60.338 52.381 0.00 0.00 44.79 4.30
6317 13507 1.067635 CAACCAGCAAATTTCCTCCCG 60.068 52.381 0.00 0.00 0.00 5.14
6318 13508 1.250840 ACCAGCAAATTTCCTCCCGC 61.251 55.000 0.00 0.00 0.00 6.13
6319 13509 1.137404 CAGCAAATTTCCTCCCGCG 59.863 57.895 0.00 0.00 0.00 6.46
6320 13510 1.303317 AGCAAATTTCCTCCCGCGT 60.303 52.632 4.92 0.00 0.00 6.01
6321 13511 1.136774 GCAAATTTCCTCCCGCGTC 59.863 57.895 4.92 0.00 0.00 5.19
6322 13512 1.800681 CAAATTTCCTCCCGCGTCC 59.199 57.895 4.92 0.00 0.00 4.79
6323 13513 0.676782 CAAATTTCCTCCCGCGTCCT 60.677 55.000 4.92 0.00 0.00 3.85
6324 13514 0.037734 AAATTTCCTCCCGCGTCCTT 59.962 50.000 4.92 0.00 0.00 3.36
6325 13515 0.392595 AATTTCCTCCCGCGTCCTTC 60.393 55.000 4.92 0.00 0.00 3.46
6326 13516 2.253403 ATTTCCTCCCGCGTCCTTCC 62.253 60.000 4.92 0.00 0.00 3.46
6345 13535 4.813526 CGGAGCAGTCGACGACCG 62.814 72.222 23.76 22.49 40.25 4.79
6346 13536 4.477975 GGAGCAGTCGACGACCGG 62.478 72.222 23.76 17.17 39.14 5.28
6347 13537 3.735029 GAGCAGTCGACGACCGGT 61.735 66.667 23.76 19.49 39.14 5.28
6348 13538 3.664223 GAGCAGTCGACGACCGGTC 62.664 68.421 25.28 25.28 42.48 4.79
6349 13539 3.735029 GCAGTCGACGACCGGTCT 61.735 66.667 30.92 18.49 43.79 3.85
6350 13540 2.176055 CAGTCGACGACCGGTCTG 59.824 66.667 30.92 24.96 43.79 3.51
6351 13541 2.281345 AGTCGACGACCGGTCTGT 60.281 61.111 30.92 27.74 43.79 3.41
6352 13542 2.175322 GTCGACGACCGGTCTGTC 59.825 66.667 31.93 31.93 43.79 3.51
6359 13549 3.916392 GACCGGTCTGTCGCTGGTG 62.916 68.421 27.64 0.00 44.95 4.17
6360 13550 4.742201 CCGGTCTGTCGCTGGTGG 62.742 72.222 0.00 0.00 0.00 4.61
6361 13551 3.680786 CGGTCTGTCGCTGGTGGA 61.681 66.667 0.00 0.00 0.00 4.02
6362 13552 2.048127 GGTCTGTCGCTGGTGGAC 60.048 66.667 0.00 0.00 34.99 4.02
6363 13553 2.430921 GTCTGTCGCTGGTGGACG 60.431 66.667 0.00 0.00 37.22 4.79
6364 13554 2.910479 TCTGTCGCTGGTGGACGT 60.910 61.111 0.00 0.00 37.22 4.34
6365 13555 2.734723 CTGTCGCTGGTGGACGTG 60.735 66.667 0.00 0.00 37.22 4.49
6366 13556 3.207547 CTGTCGCTGGTGGACGTGA 62.208 63.158 0.00 0.00 37.22 4.35
6367 13557 2.430921 GTCGCTGGTGGACGTGAG 60.431 66.667 0.00 0.00 0.00 3.51
6368 13558 3.680786 TCGCTGGTGGACGTGAGG 61.681 66.667 0.00 0.00 0.00 3.86
6369 13559 3.991051 CGCTGGTGGACGTGAGGT 61.991 66.667 0.00 0.00 0.00 3.85
6370 13560 2.048127 GCTGGTGGACGTGAGGTC 60.048 66.667 0.00 0.00 45.31 3.85
6378 13568 3.369381 GACGTGAGGTCCATGATGG 57.631 57.895 4.74 4.74 39.90 3.51
6379 13569 0.824109 GACGTGAGGTCCATGATGGA 59.176 55.000 10.75 10.75 45.98 3.41
6389 13579 2.737544 TCCATGATGGAAATGGTGGTG 58.262 47.619 12.63 0.00 45.00 4.17
6390 13580 1.137479 CCATGATGGAAATGGTGGTGC 59.863 52.381 5.27 0.00 40.96 5.01
6391 13581 2.104967 CATGATGGAAATGGTGGTGCT 58.895 47.619 0.00 0.00 0.00 4.40
6392 13582 1.548081 TGATGGAAATGGTGGTGCTG 58.452 50.000 0.00 0.00 0.00 4.41
6393 13583 1.075212 TGATGGAAATGGTGGTGCTGA 59.925 47.619 0.00 0.00 0.00 4.26
6394 13584 1.474077 GATGGAAATGGTGGTGCTGAC 59.526 52.381 0.00 0.00 0.00 3.51
6395 13585 0.888736 TGGAAATGGTGGTGCTGACG 60.889 55.000 0.00 0.00 0.00 4.35
6396 13586 1.210155 GAAATGGTGGTGCTGACGC 59.790 57.895 0.00 0.00 0.00 5.19
6397 13587 1.228245 AAATGGTGGTGCTGACGCT 60.228 52.632 0.00 0.00 36.97 5.07
6398 13588 1.518056 AAATGGTGGTGCTGACGCTG 61.518 55.000 0.00 0.00 36.97 5.18
6399 13589 2.680974 AATGGTGGTGCTGACGCTGT 62.681 55.000 0.00 0.00 36.97 4.40
6400 13590 3.044305 GGTGGTGCTGACGCTGTC 61.044 66.667 2.32 2.32 36.97 3.51
6401 13591 3.406361 GTGGTGCTGACGCTGTCG 61.406 66.667 4.65 0.00 42.43 4.35
6413 13603 4.415332 CTGTCGTCGTCCCACCGG 62.415 72.222 0.00 0.00 0.00 5.28
6423 13613 4.127744 CCCACCGGGCCACATGAT 62.128 66.667 6.32 0.00 35.35 2.45
6424 13614 2.829914 CCACCGGGCCACATGATG 60.830 66.667 6.32 0.00 0.00 3.07
6434 13624 2.385013 CCACATGATGGTTCGTCTCA 57.615 50.000 0.00 0.00 44.46 3.27
6435 13625 2.910199 CCACATGATGGTTCGTCTCAT 58.090 47.619 0.00 0.00 44.46 2.90
6436 13626 2.868583 CCACATGATGGTTCGTCTCATC 59.131 50.000 0.00 0.00 44.46 2.92
6437 13627 2.868583 CACATGATGGTTCGTCTCATCC 59.131 50.000 0.00 0.00 39.06 3.51
6438 13628 2.501316 ACATGATGGTTCGTCTCATCCA 59.499 45.455 0.00 0.00 39.06 3.41
6439 13629 2.672961 TGATGGTTCGTCTCATCCAC 57.327 50.000 10.35 0.00 39.06 4.02
6440 13630 1.899142 TGATGGTTCGTCTCATCCACA 59.101 47.619 10.35 0.00 39.06 4.17
6441 13631 2.301583 TGATGGTTCGTCTCATCCACAA 59.698 45.455 10.35 0.00 39.06 3.33
6442 13632 3.055167 TGATGGTTCGTCTCATCCACAAT 60.055 43.478 10.35 0.00 39.06 2.71
6443 13633 2.972625 TGGTTCGTCTCATCCACAATC 58.027 47.619 0.00 0.00 0.00 2.67
6444 13634 1.927174 GGTTCGTCTCATCCACAATCG 59.073 52.381 0.00 0.00 0.00 3.34
6445 13635 1.324736 GTTCGTCTCATCCACAATCGC 59.675 52.381 0.00 0.00 0.00 4.58
6446 13636 0.179111 TCGTCTCATCCACAATCGCC 60.179 55.000 0.00 0.00 0.00 5.54
6447 13637 0.179100 CGTCTCATCCACAATCGCCT 60.179 55.000 0.00 0.00 0.00 5.52
6448 13638 1.067060 CGTCTCATCCACAATCGCCTA 59.933 52.381 0.00 0.00 0.00 3.93
6449 13639 2.474816 GTCTCATCCACAATCGCCTAC 58.525 52.381 0.00 0.00 0.00 3.18
6450 13640 2.107366 TCTCATCCACAATCGCCTACA 58.893 47.619 0.00 0.00 0.00 2.74
6451 13641 2.499693 TCTCATCCACAATCGCCTACAA 59.500 45.455 0.00 0.00 0.00 2.41
6452 13642 2.609459 CTCATCCACAATCGCCTACAAC 59.391 50.000 0.00 0.00 0.00 3.32
6453 13643 2.236146 TCATCCACAATCGCCTACAACT 59.764 45.455 0.00 0.00 0.00 3.16
6454 13644 2.093306 TCCACAATCGCCTACAACTG 57.907 50.000 0.00 0.00 0.00 3.16
6455 13645 0.447801 CCACAATCGCCTACAACTGC 59.552 55.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.243736 TGTGTTTTGTCCCTTTCTCCCT 59.756 45.455 0.00 0.00 0.00 4.20
1 2 2.661718 TGTGTTTTGTCCCTTTCTCCC 58.338 47.619 0.00 0.00 0.00 4.30
2 3 4.729227 TTTGTGTTTTGTCCCTTTCTCC 57.271 40.909 0.00 0.00 0.00 3.71
3 4 4.566759 GCTTTTGTGTTTTGTCCCTTTCTC 59.433 41.667 0.00 0.00 0.00 2.87
4 5 4.503910 GCTTTTGTGTTTTGTCCCTTTCT 58.496 39.130 0.00 0.00 0.00 2.52
5 6 3.305897 CGCTTTTGTGTTTTGTCCCTTTC 59.694 43.478 0.00 0.00 0.00 2.62
6 7 3.258228 CGCTTTTGTGTTTTGTCCCTTT 58.742 40.909 0.00 0.00 0.00 3.11
7 8 2.418060 CCGCTTTTGTGTTTTGTCCCTT 60.418 45.455 0.00 0.00 0.00 3.95
8 9 1.136110 CCGCTTTTGTGTTTTGTCCCT 59.864 47.619 0.00 0.00 0.00 4.20
9 10 1.134936 ACCGCTTTTGTGTTTTGTCCC 60.135 47.619 0.00 0.00 0.00 4.46
10 11 2.190161 GACCGCTTTTGTGTTTTGTCC 58.810 47.619 0.00 0.00 0.00 4.02
11 12 2.190161 GGACCGCTTTTGTGTTTTGTC 58.810 47.619 0.00 0.00 0.00 3.18
12 13 1.546476 TGGACCGCTTTTGTGTTTTGT 59.454 42.857 0.00 0.00 0.00 2.83
13 14 2.285827 TGGACCGCTTTTGTGTTTTG 57.714 45.000 0.00 0.00 0.00 2.44
14 15 2.820330 CATGGACCGCTTTTGTGTTTT 58.180 42.857 0.00 0.00 0.00 2.43
15 16 1.537990 GCATGGACCGCTTTTGTGTTT 60.538 47.619 0.00 0.00 0.00 2.83
16 17 0.031994 GCATGGACCGCTTTTGTGTT 59.968 50.000 0.00 0.00 0.00 3.32
17 18 1.106351 TGCATGGACCGCTTTTGTGT 61.106 50.000 0.00 0.00 0.00 3.72
18 19 0.031857 TTGCATGGACCGCTTTTGTG 59.968 50.000 0.00 0.00 0.00 3.33
19 20 0.031994 GTTGCATGGACCGCTTTTGT 59.968 50.000 0.00 0.00 0.00 2.83
20 21 0.667184 GGTTGCATGGACCGCTTTTG 60.667 55.000 0.00 0.00 0.00 2.44
21 22 1.665442 GGTTGCATGGACCGCTTTT 59.335 52.632 0.00 0.00 0.00 2.27
22 23 2.275380 GGGTTGCATGGACCGCTTT 61.275 57.895 0.00 0.00 38.08 3.51
23 24 2.676471 GGGTTGCATGGACCGCTT 60.676 61.111 0.00 0.00 38.08 4.68
24 25 3.650950 AGGGTTGCATGGACCGCT 61.651 61.111 0.00 0.00 38.08 5.52
25 26 3.443045 CAGGGTTGCATGGACCGC 61.443 66.667 0.00 0.00 38.08 5.68
26 27 0.893270 TTTCAGGGTTGCATGGACCG 60.893 55.000 0.00 0.00 38.08 4.79
27 28 1.337118 TTTTCAGGGTTGCATGGACC 58.663 50.000 0.00 0.00 36.41 4.46
28 29 2.102252 TGTTTTTCAGGGTTGCATGGAC 59.898 45.455 0.00 0.00 0.00 4.02
29 30 2.102252 GTGTTTTTCAGGGTTGCATGGA 59.898 45.455 0.00 0.00 0.00 3.41
30 31 2.158986 TGTGTTTTTCAGGGTTGCATGG 60.159 45.455 0.00 0.00 0.00 3.66
31 32 3.176552 TGTGTTTTTCAGGGTTGCATG 57.823 42.857 0.00 0.00 0.00 4.06
32 33 3.902881 TTGTGTTTTTCAGGGTTGCAT 57.097 38.095 0.00 0.00 0.00 3.96
33 34 3.685139 TTTGTGTTTTTCAGGGTTGCA 57.315 38.095 0.00 0.00 0.00 4.08
34 35 4.441792 AGATTTGTGTTTTTCAGGGTTGC 58.558 39.130 0.00 0.00 0.00 4.17
35 36 5.049828 GGAGATTTGTGTTTTTCAGGGTTG 58.950 41.667 0.00 0.00 0.00 3.77
36 37 4.714308 TGGAGATTTGTGTTTTTCAGGGTT 59.286 37.500 0.00 0.00 0.00 4.11
37 38 4.285863 TGGAGATTTGTGTTTTTCAGGGT 58.714 39.130 0.00 0.00 0.00 4.34
38 39 4.935352 TGGAGATTTGTGTTTTTCAGGG 57.065 40.909 0.00 0.00 0.00 4.45
39 40 6.147864 TCTTGGAGATTTGTGTTTTTCAGG 57.852 37.500 0.00 0.00 0.00 3.86
52 53 7.121382 TGCCTTAGATGAAAATCTTGGAGATT 58.879 34.615 9.97 0.00 46.22 2.40
53 54 6.666678 TGCCTTAGATGAAAATCTTGGAGAT 58.333 36.000 9.97 0.00 36.28 2.75
54 55 6.065976 TGCCTTAGATGAAAATCTTGGAGA 57.934 37.500 9.97 0.00 32.36 3.71
55 56 6.956202 ATGCCTTAGATGAAAATCTTGGAG 57.044 37.500 9.97 1.43 32.36 3.86
56 57 7.000472 CCTATGCCTTAGATGAAAATCTTGGA 59.000 38.462 9.97 0.00 32.36 3.53
57 58 7.000472 TCCTATGCCTTAGATGAAAATCTTGG 59.000 38.462 0.00 0.00 32.36 3.61
58 59 7.718753 ACTCCTATGCCTTAGATGAAAATCTTG 59.281 37.037 0.00 0.00 32.36 3.02
59 60 7.810260 ACTCCTATGCCTTAGATGAAAATCTT 58.190 34.615 0.00 0.00 32.36 2.40
60 61 7.385894 ACTCCTATGCCTTAGATGAAAATCT 57.614 36.000 0.00 0.00 34.80 2.40
61 62 8.994170 GTAACTCCTATGCCTTAGATGAAAATC 58.006 37.037 0.00 0.00 0.00 2.17
62 63 8.718656 AGTAACTCCTATGCCTTAGATGAAAAT 58.281 33.333 0.00 0.00 0.00 1.82
63 64 8.090788 AGTAACTCCTATGCCTTAGATGAAAA 57.909 34.615 0.00 0.00 0.00 2.29
64 65 7.202011 GGAGTAACTCCTATGCCTTAGATGAAA 60.202 40.741 0.00 0.00 46.41 2.69
65 66 6.267928 GGAGTAACTCCTATGCCTTAGATGAA 59.732 42.308 0.00 0.00 46.41 2.57
66 67 5.775701 GGAGTAACTCCTATGCCTTAGATGA 59.224 44.000 0.00 0.00 46.41 2.92
67 68 6.031751 GGAGTAACTCCTATGCCTTAGATG 57.968 45.833 0.00 0.00 46.41 2.90
81 82 1.477295 CTGGAACGGAGGGAGTAACTC 59.523 57.143 0.00 0.00 36.31 3.01
82 83 1.076677 TCTGGAACGGAGGGAGTAACT 59.923 52.381 0.00 0.00 39.80 2.24
83 84 1.553706 TCTGGAACGGAGGGAGTAAC 58.446 55.000 0.00 0.00 39.80 2.50
92 93 4.291792 TGGGTTATCTATTCTGGAACGGA 58.708 43.478 0.00 0.00 45.11 4.69
93 94 4.682778 TGGGTTATCTATTCTGGAACGG 57.317 45.455 0.00 0.00 0.00 4.44
94 95 7.568199 AAATTGGGTTATCTATTCTGGAACG 57.432 36.000 0.00 0.00 0.00 3.95
131 132 9.975218 ATGACCCAACTTTATACTAACTTTGAT 57.025 29.630 0.00 0.00 0.00 2.57
132 133 9.444600 GATGACCCAACTTTATACTAACTTTGA 57.555 33.333 0.00 0.00 0.00 2.69
133 134 9.449719 AGATGACCCAACTTTATACTAACTTTG 57.550 33.333 0.00 0.00 0.00 2.77
145 146 8.085909 CCGTTTTAAAATAGATGACCCAACTTT 58.914 33.333 3.52 0.00 0.00 2.66
146 147 7.449086 TCCGTTTTAAAATAGATGACCCAACTT 59.551 33.333 3.52 0.00 0.00 2.66
147 148 6.943718 TCCGTTTTAAAATAGATGACCCAACT 59.056 34.615 3.52 0.00 0.00 3.16
148 149 7.148355 TCCGTTTTAAAATAGATGACCCAAC 57.852 36.000 3.52 0.00 0.00 3.77
149 150 7.762588 TTCCGTTTTAAAATAGATGACCCAA 57.237 32.000 3.52 0.00 0.00 4.12
150 151 7.666388 TCTTTCCGTTTTAAAATAGATGACCCA 59.334 33.333 3.52 0.00 0.00 4.51
151 152 8.047413 TCTTTCCGTTTTAAAATAGATGACCC 57.953 34.615 3.52 0.00 0.00 4.46
152 153 8.727910 ACTCTTTCCGTTTTAAAATAGATGACC 58.272 33.333 3.52 0.00 0.00 4.02
162 163 9.672086 CATCACATTTACTCTTTCCGTTTTAAA 57.328 29.630 0.00 0.00 0.00 1.52
163 164 9.058174 TCATCACATTTACTCTTTCCGTTTTAA 57.942 29.630 0.00 0.00 0.00 1.52
164 165 8.610248 TCATCACATTTACTCTTTCCGTTTTA 57.390 30.769 0.00 0.00 0.00 1.52
165 166 7.444183 TCTCATCACATTTACTCTTTCCGTTTT 59.556 33.333 0.00 0.00 0.00 2.43
166 167 6.934645 TCTCATCACATTTACTCTTTCCGTTT 59.065 34.615 0.00 0.00 0.00 3.60
167 168 6.464222 TCTCATCACATTTACTCTTTCCGTT 58.536 36.000 0.00 0.00 0.00 4.44
168 169 6.037786 TCTCATCACATTTACTCTTTCCGT 57.962 37.500 0.00 0.00 0.00 4.69
169 170 6.968131 TTCTCATCACATTTACTCTTTCCG 57.032 37.500 0.00 0.00 0.00 4.30
171 172 9.928236 GCTAATTCTCATCACATTTACTCTTTC 57.072 33.333 0.00 0.00 0.00 2.62
172 173 9.678260 AGCTAATTCTCATCACATTTACTCTTT 57.322 29.630 0.00 0.00 0.00 2.52
210 211 9.613428 CCAGACATGAAGATAACCACTATTTAA 57.387 33.333 0.00 0.00 0.00 1.52
211 212 8.210946 CCCAGACATGAAGATAACCACTATTTA 58.789 37.037 0.00 0.00 0.00 1.40
212 213 7.056635 CCCAGACATGAAGATAACCACTATTT 58.943 38.462 0.00 0.00 0.00 1.40
213 214 6.386927 TCCCAGACATGAAGATAACCACTATT 59.613 38.462 0.00 0.00 0.00 1.73
214 215 5.905331 TCCCAGACATGAAGATAACCACTAT 59.095 40.000 0.00 0.00 0.00 2.12
215 216 5.277250 TCCCAGACATGAAGATAACCACTA 58.723 41.667 0.00 0.00 0.00 2.74
216 217 4.104086 TCCCAGACATGAAGATAACCACT 58.896 43.478 0.00 0.00 0.00 4.00
217 218 4.487714 TCCCAGACATGAAGATAACCAC 57.512 45.455 0.00 0.00 0.00 4.16
218 219 5.715439 AATCCCAGACATGAAGATAACCA 57.285 39.130 0.00 0.00 0.00 3.67
219 220 6.261826 CAGAAATCCCAGACATGAAGATAACC 59.738 42.308 0.00 0.00 0.00 2.85
220 221 6.825721 ACAGAAATCCCAGACATGAAGATAAC 59.174 38.462 0.00 0.00 0.00 1.89
221 222 6.962182 ACAGAAATCCCAGACATGAAGATAA 58.038 36.000 0.00 0.00 0.00 1.75
222 223 6.566079 ACAGAAATCCCAGACATGAAGATA 57.434 37.500 0.00 0.00 0.00 1.98
223 224 5.447778 ACAGAAATCCCAGACATGAAGAT 57.552 39.130 0.00 0.00 0.00 2.40
224 225 4.916041 ACAGAAATCCCAGACATGAAGA 57.084 40.909 0.00 0.00 0.00 2.87
225 226 7.452880 TTTAACAGAAATCCCAGACATGAAG 57.547 36.000 0.00 0.00 0.00 3.02
226 227 7.505585 AGTTTTAACAGAAATCCCAGACATGAA 59.494 33.333 0.00 0.00 0.00 2.57
227 228 7.004086 AGTTTTAACAGAAATCCCAGACATGA 58.996 34.615 0.00 0.00 0.00 3.07
228 229 7.219484 AGTTTTAACAGAAATCCCAGACATG 57.781 36.000 0.00 0.00 0.00 3.21
229 230 8.934023 TTAGTTTTAACAGAAATCCCAGACAT 57.066 30.769 0.00 0.00 0.00 3.06
230 231 7.996644 ACTTAGTTTTAACAGAAATCCCAGACA 59.003 33.333 0.00 0.00 0.00 3.41
231 232 8.392372 ACTTAGTTTTAACAGAAATCCCAGAC 57.608 34.615 0.00 0.00 0.00 3.51
232 233 8.990163 AACTTAGTTTTAACAGAAATCCCAGA 57.010 30.769 0.00 0.00 0.00 3.86
260 261 9.493206 CAACTTAGTTTTAACAGCTTCGTAAAA 57.507 29.630 0.00 0.00 0.00 1.52
261 262 8.881743 TCAACTTAGTTTTAACAGCTTCGTAAA 58.118 29.630 0.00 0.00 0.00 2.01
262 263 8.422973 TCAACTTAGTTTTAACAGCTTCGTAA 57.577 30.769 0.00 0.00 0.00 3.18
263 264 8.597662 ATCAACTTAGTTTTAACAGCTTCGTA 57.402 30.769 0.00 0.00 0.00 3.43
264 265 6.913873 TCAACTTAGTTTTAACAGCTTCGT 57.086 33.333 0.00 0.00 0.00 3.85
265 266 8.067784 TGAATCAACTTAGTTTTAACAGCTTCG 58.932 33.333 0.00 0.00 0.00 3.79
266 267 9.730420 TTGAATCAACTTAGTTTTAACAGCTTC 57.270 29.630 0.00 0.00 0.00 3.86
268 269 9.899226 GATTGAATCAACTTAGTTTTAACAGCT 57.101 29.630 0.00 0.00 0.00 4.24
269 270 9.677567 TGATTGAATCAACTTAGTTTTAACAGC 57.322 29.630 5.21 0.00 36.11 4.40
304 305 5.820947 GGGATTGACGTCATAAGTTTATGGT 59.179 40.000 20.80 3.58 40.64 3.55
307 308 5.054477 CGGGGATTGACGTCATAAGTTTAT 58.946 41.667 20.80 7.78 0.00 1.40
360 361 1.977594 CTACCAACCGCGGCATTCAC 61.978 60.000 28.58 0.00 0.00 3.18
386 387 1.630369 AGCAGGGATGCTGACACTAAA 59.370 47.619 1.20 0.00 44.44 1.85
401 402 4.569180 CCGGCCCATGGTAGCAGG 62.569 72.222 15.56 15.56 37.99 4.85
464 465 2.933906 TGCTATTTGTAGTAGTTGCGGC 59.066 45.455 0.00 0.00 0.00 6.53
581 5196 5.867716 TCTTAGCGGTGATTACAAGAGAAAC 59.132 40.000 0.00 0.00 0.00 2.78
584 5199 4.461431 TGTCTTAGCGGTGATTACAAGAGA 59.539 41.667 0.00 0.00 0.00 3.10
691 5306 2.888834 TTGAAAAGCTGCCAGGTTTC 57.111 45.000 20.99 14.66 44.21 2.78
694 5309 3.843893 AAAATTGAAAAGCTGCCAGGT 57.156 38.095 0.00 0.00 0.00 4.00
724 5339 2.238521 GGATGGCAGTTTCTGTTGGAA 58.761 47.619 0.00 0.00 33.43 3.53
873 6010 3.515901 AGGGGTCAGAACTCAGAATACAC 59.484 47.826 0.00 0.00 0.00 2.90
881 6018 2.362242 CGGAAGGGGTCAGAACTCA 58.638 57.895 0.00 0.00 0.00 3.41
900 6037 4.722700 TTGCAAGAGGAGGCCGGC 62.723 66.667 21.18 21.18 0.00 6.13
998 6138 1.686110 GACCCCGACCCTGACATCT 60.686 63.158 0.00 0.00 0.00 2.90
1005 6145 4.716977 GGACTGGACCCCGACCCT 62.717 72.222 0.00 0.00 0.00 4.34
1073 6213 3.234630 CTCGGGTTCGGAGGTTGCA 62.235 63.158 0.00 0.00 36.95 4.08
1214 6354 1.875813 CTCGCGGAGTCAGATGCAC 60.876 63.158 6.13 0.00 0.00 4.57
1239 6379 4.475135 GCCCCGGACTTGCTCCTC 62.475 72.222 0.73 0.00 36.80 3.71
1241 6381 4.115199 ATGCCCCGGACTTGCTCC 62.115 66.667 0.73 0.00 35.33 4.70
1252 6392 2.031163 CTCCGATTCCGATGCCCC 59.969 66.667 0.00 0.00 38.22 5.80
1277 6417 1.068194 CCTCCTGTGAAGACGTCTCAC 60.068 57.143 27.18 27.18 35.17 3.51
1283 6423 1.216710 GGCTCCTCCTGTGAAGACG 59.783 63.158 0.00 0.00 0.00 4.18
1439 6591 3.202906 TCATACTTGCGTAAATCCTGGC 58.797 45.455 0.00 0.00 0.00 4.85
1514 6686 8.378172 AGAAAAGAGTGAATAACGTTGAATGA 57.622 30.769 11.99 0.00 0.00 2.57
1533 6705 8.986847 CATACAGTTATGCCTCAGATAGAAAAG 58.013 37.037 0.00 0.00 0.00 2.27
1583 6759 4.814234 TGAGCGTCAGTAATTGTTCTTGTT 59.186 37.500 0.00 0.00 0.00 2.83
1650 6826 4.387026 AATCATGTCCTTGTTCTTGGGA 57.613 40.909 0.00 0.00 0.00 4.37
1730 6906 7.823745 TGCAATAGAGTGACAGAGACATATA 57.176 36.000 0.00 0.00 0.00 0.86
1731 6907 6.721704 TGCAATAGAGTGACAGAGACATAT 57.278 37.500 0.00 0.00 0.00 1.78
1753 6929 7.748847 ACCGTAATTAACAAGCAACTTCTATG 58.251 34.615 0.00 0.00 0.00 2.23
1787 6963 5.584649 CGGTTAATCTCTTTGCCATCTGTAA 59.415 40.000 0.00 0.00 0.00 2.41
1847 7023 8.912988 CAGAGGTGAGAATAGTAAGAGATTTCT 58.087 37.037 0.00 0.00 34.29 2.52
1962 7138 9.042008 ACGAAGTATTTTGTATAGCTAACATGG 57.958 33.333 0.00 0.00 41.94 3.66
2007 7186 9.764363 GAAGTACATATATTGTCTCCATTCACA 57.236 33.333 0.00 0.00 39.87 3.58
2008 7187 9.988815 AGAAGTACATATATTGTCTCCATTCAC 57.011 33.333 0.00 0.00 39.87 3.18
2072 7257 4.883585 TGCAAGAGGGCTGAATGTAAATAG 59.116 41.667 0.00 0.00 34.04 1.73
2073 7258 4.854173 TGCAAGAGGGCTGAATGTAAATA 58.146 39.130 0.00 0.00 34.04 1.40
2074 7259 3.700538 TGCAAGAGGGCTGAATGTAAAT 58.299 40.909 0.00 0.00 34.04 1.40
2127 7312 3.002656 CACACAAACATCACACAGAGACC 59.997 47.826 0.00 0.00 0.00 3.85
2136 7321 6.578545 CAGCTAAATGTACACACAAACATCAC 59.421 38.462 0.00 0.00 38.42 3.06
2193 7378 9.349713 TCCAACACTTGATATTTAAGTCAAAGT 57.650 29.630 3.99 0.00 36.29 2.66
2254 7441 6.208988 TGTGATAGTCGATTAGAAACAGCT 57.791 37.500 0.00 0.00 0.00 4.24
2255 7442 7.470289 AATGTGATAGTCGATTAGAAACAGC 57.530 36.000 0.00 0.00 0.00 4.40
2299 7486 1.813753 CTACGGTTGTGCCATCCGG 60.814 63.158 21.15 0.00 46.94 5.14
2316 7503 9.890629 TTGCTAAAGTACATCAATTGACTATCT 57.109 29.630 11.07 4.89 0.00 1.98
2353 7540 4.278669 TCCTGTAATCTCATAGAAGGCGAC 59.721 45.833 0.00 0.00 0.00 5.19
2363 7550 7.497249 GCAAGTGTAAATCTCCTGTAATCTCAT 59.503 37.037 0.00 0.00 0.00 2.90
2373 7560 7.553044 GGTAAACTATGCAAGTGTAAATCTCCT 59.447 37.037 0.00 0.00 38.88 3.69
2378 7565 8.250332 CCAATGGTAAACTATGCAAGTGTAAAT 58.750 33.333 0.00 0.00 38.88 1.40
2426 7613 5.613358 AGCTACTAACACAAATGCTTCAC 57.387 39.130 0.00 0.00 0.00 3.18
2612 7799 7.097192 CACACTACATTTAGAGGCTCACTTAA 58.903 38.462 18.26 3.89 0.00 1.85
2619 7806 4.532521 AGTTCCACACTACATTTAGAGGCT 59.467 41.667 0.00 0.00 31.97 4.58
2838 8025 3.609373 CGCCACATTAAAAGACAGCATTG 59.391 43.478 0.00 0.00 0.00 2.82
2845 8032 1.125847 CGCGCGCCACATTAAAAGAC 61.126 55.000 27.72 0.00 0.00 3.01
2850 8037 1.433053 ATAAGCGCGCGCCACATTAA 61.433 50.000 46.98 26.04 43.17 1.40
2860 8047 0.317269 ATGCATCAACATAAGCGCGC 60.317 50.000 26.66 26.66 0.00 6.86
2881 8068 1.845266 CATCAGTTGACGATCGAGGG 58.155 55.000 24.34 4.96 0.00 4.30
2949 8136 3.181495 CGCTTTCTTCTGATCGTCCTAGT 60.181 47.826 0.00 0.00 0.00 2.57
2954 8141 2.596419 CTGACGCTTTCTTCTGATCGTC 59.404 50.000 5.74 5.74 44.31 4.20
3083 8353 5.178096 TCAAAGGGATGTGATGCTCTTTA 57.822 39.130 0.00 0.00 0.00 1.85
3093 8363 3.125829 CAGTTGACGATCAAAGGGATGTG 59.874 47.826 0.00 0.00 38.22 3.21
3101 8371 4.934602 TGTATGCATCAGTTGACGATCAAA 59.065 37.500 0.19 0.00 38.22 2.69
3103 8373 4.122143 TGTATGCATCAGTTGACGATCA 57.878 40.909 0.19 0.00 0.00 2.92
3104 8374 5.663795 ATTGTATGCATCAGTTGACGATC 57.336 39.130 0.19 0.00 0.00 3.69
3135 8405 6.712095 AGTCAAAGCAGAGTAATGATGAAACA 59.288 34.615 0.00 0.00 0.00 2.83
3199 8469 6.034577 TCGTAGTCTTTTCGATTTGTATGCAG 59.965 38.462 0.00 0.00 0.00 4.41
3215 8485 4.649692 TGAGTAGGACAAGTCGTAGTCTT 58.350 43.478 25.68 7.27 44.47 3.01
3241 8511 2.829120 GTCAAAGCAGAGTCCTAGTCCT 59.171 50.000 0.00 0.00 0.00 3.85
3263 8533 3.441496 ACGTGAGTCGGTTCTGTAAAA 57.559 42.857 0.00 0.00 44.19 1.52
3281 8551 9.314321 TCTAGCTTGATTAAAGAAATAAGGACG 57.686 33.333 0.00 0.00 38.24 4.79
3344 8614 2.166664 CCGCTACTACCTTTGAAGCTCT 59.833 50.000 0.00 0.00 0.00 4.09
3369 8639 1.843368 TGAACTCGTCCTCCCGTATT 58.157 50.000 0.00 0.00 0.00 1.89
3399 8669 2.037251 ACTTGCTAATCACGACACCTGT 59.963 45.455 0.00 0.00 0.00 4.00
3486 8756 4.202315 ACAAACCAAGCAGAAATAAACCCC 60.202 41.667 0.00 0.00 0.00 4.95
3580 10203 9.812347 ATTGCATTCAGGACCATATATTTCTAA 57.188 29.630 0.00 0.00 0.00 2.10
3643 10267 4.815308 CACAATTTTCCTGCCAAACAATCA 59.185 37.500 0.00 0.00 0.00 2.57
3718 10342 7.686438 AATTATGTGACAACTGCTCAATACA 57.314 32.000 0.00 0.00 0.00 2.29
3906 10625 9.605275 CTCTCTCCTTGACATGATAAAATAACA 57.395 33.333 0.00 0.00 0.00 2.41
3921 10640 6.672266 ATACTTGAAACACTCTCTCCTTGA 57.328 37.500 0.00 0.00 0.00 3.02
4003 10722 5.584649 TCGAACTGAAACAAACTGTCAGAAT 59.415 36.000 6.91 0.00 41.08 2.40
4130 10849 7.100409 AGTAGACTTATGAGTTCTTTTCTGCC 58.900 38.462 0.00 0.00 35.88 4.85
4131 10850 9.078753 GTAGTAGACTTATGAGTTCTTTTCTGC 57.921 37.037 0.00 0.00 35.88 4.26
4240 11181 2.816672 GAGGCTTGGCTATATTTGGAGC 59.183 50.000 0.00 0.00 38.00 4.70
4370 11316 3.550233 GCATGCATGTGTCCATCTTCATC 60.550 47.826 26.79 2.16 0.00 2.92
4435 11381 7.050970 TCCTATCGTATTTGCATACTTCTGT 57.949 36.000 0.00 0.00 34.10 3.41
4438 11384 7.095229 TGCAATCCTATCGTATTTGCATACTTC 60.095 37.037 4.66 0.00 45.42 3.01
4441 11387 6.480524 TGCAATCCTATCGTATTTGCATAC 57.519 37.500 4.66 0.00 45.42 2.39
4470 11416 3.991773 CACCCAATTCTGCAGATTGTTTG 59.008 43.478 19.04 17.27 0.00 2.93
4518 11464 6.334989 TCACCATCATTTTCATGATTTCTGC 58.665 36.000 0.00 0.00 46.45 4.26
4535 11481 6.024552 TGCTTTGACCTTATTTTCACCATC 57.975 37.500 0.00 0.00 0.00 3.51
4541 11487 9.305925 CTTTGGATATGCTTTGACCTTATTTTC 57.694 33.333 0.00 0.00 0.00 2.29
4594 11540 1.986882 AGAACAAGCCAAAGGTCCTG 58.013 50.000 0.00 0.00 0.00 3.86
4596 11542 2.430694 ACAAAGAACAAGCCAAAGGTCC 59.569 45.455 0.00 0.00 0.00 4.46
4605 11551 4.503741 TTCCTATGCACAAAGAACAAGC 57.496 40.909 0.00 0.00 0.00 4.01
4644 11590 4.261801 ACAAAGGAATCCTACAATCCACG 58.738 43.478 0.46 0.00 35.62 4.94
4656 11602 8.576442 TGAGTTTCATAGGAAAACAAAGGAATC 58.424 33.333 3.78 0.00 44.18 2.52
4804 11752 4.654262 TGATTCGAACTTAGGGCCTCTTAT 59.346 41.667 10.74 0.00 0.00 1.73
4822 11770 8.980143 TTTTAATCTCGGTGGAATTTTGATTC 57.020 30.769 0.00 0.00 0.00 2.52
4833 11781 4.497473 TGTTGCTTTTTAATCTCGGTGG 57.503 40.909 0.00 0.00 0.00 4.61
4877 11825 2.495939 CGACAAACACTAATTGCTCGC 58.504 47.619 0.00 0.00 30.69 5.03
4937 11885 0.390124 CCAGTGCAAGCAACCAACAT 59.610 50.000 0.00 0.00 0.00 2.71
5068 12063 4.894114 ACATATGTCACCTAGTCACCTACC 59.106 45.833 1.41 0.00 0.00 3.18
5095 12090 9.018582 CACTTCATGGTCACATATCTAGATAGA 57.981 37.037 17.22 7.24 34.99 1.98
5160 12155 1.068588 GGTTCTGAAGGGTTGTTTGGC 59.931 52.381 0.00 0.00 0.00 4.52
5176 12355 5.850614 AGTGGGATATAACGTGTATGGTTC 58.149 41.667 0.00 0.00 0.00 3.62
5216 12398 8.795786 ATTATGTTACGCGCAATTGATAAAAT 57.204 26.923 10.34 5.13 0.00 1.82
5225 12407 5.263185 GTCTTCAATTATGTTACGCGCAAT 58.737 37.500 5.73 0.00 0.00 3.56
5228 12410 3.308866 AGGTCTTCAATTATGTTACGCGC 59.691 43.478 5.73 0.00 0.00 6.86
5232 12414 9.391006 TCCATGTTAGGTCTTCAATTATGTTAC 57.609 33.333 0.00 0.00 0.00 2.50
5236 12418 6.769822 AGCTCCATGTTAGGTCTTCAATTATG 59.230 38.462 0.00 0.00 0.00 1.90
5276 12459 2.639286 CCAAAGCTCGTGTGTGCC 59.361 61.111 0.00 0.00 35.20 5.01
5359 12542 0.753262 ACTCCGACCTATGATGCCAC 59.247 55.000 0.00 0.00 0.00 5.01
5512 12695 9.181061 GGAATTTGAATCATCATTCCCATTTTT 57.819 29.630 17.64 0.00 38.19 1.94
5519 12703 8.242729 AGGTTAGGAATTTGAATCATCATTCC 57.757 34.615 19.52 19.52 41.81 3.01
5586 12770 4.932200 AGCTACAATGCTAAATATCGGAGC 59.068 41.667 0.00 0.00 42.10 4.70
5615 12799 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
5616 12800 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
5617 12801 9.907229 AAAAGACTTATATTTAGGAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
5692 12876 9.214953 CGAAGCAAAATGAATAAATCTACACTC 57.785 33.333 0.00 0.00 0.00 3.51
5693 12877 8.730680 ACGAAGCAAAATGAATAAATCTACACT 58.269 29.630 0.00 0.00 0.00 3.55
5694 12878 8.895932 ACGAAGCAAAATGAATAAATCTACAC 57.104 30.769 0.00 0.00 0.00 2.90
5701 12885 9.982291 GACTACATACGAAGCAAAATGAATAAA 57.018 29.630 0.00 0.00 0.00 1.40
5702 12886 8.609176 GGACTACATACGAAGCAAAATGAATAA 58.391 33.333 0.00 0.00 0.00 1.40
5703 12887 7.766738 TGGACTACATACGAAGCAAAATGAATA 59.233 33.333 0.00 0.00 0.00 1.75
5704 12888 6.597672 TGGACTACATACGAAGCAAAATGAAT 59.402 34.615 0.00 0.00 0.00 2.57
5705 12889 5.935206 TGGACTACATACGAAGCAAAATGAA 59.065 36.000 0.00 0.00 0.00 2.57
5706 12890 5.483811 TGGACTACATACGAAGCAAAATGA 58.516 37.500 0.00 0.00 0.00 2.57
5707 12891 5.794687 TGGACTACATACGAAGCAAAATG 57.205 39.130 0.00 0.00 0.00 2.32
5708 12892 7.224753 CACTATGGACTACATACGAAGCAAAAT 59.775 37.037 0.00 0.00 41.03 1.82
5709 12893 6.533723 CACTATGGACTACATACGAAGCAAAA 59.466 38.462 0.00 0.00 41.03 2.44
5710 12894 6.040247 CACTATGGACTACATACGAAGCAAA 58.960 40.000 0.00 0.00 41.03 3.68
5711 12895 5.126545 ACACTATGGACTACATACGAAGCAA 59.873 40.000 0.00 0.00 41.03 3.91
5712 12896 4.643334 ACACTATGGACTACATACGAAGCA 59.357 41.667 0.00 0.00 41.03 3.91
5713 12897 5.184340 ACACTATGGACTACATACGAAGC 57.816 43.478 0.00 0.00 41.03 3.86
5714 12898 8.784994 AGATTACACTATGGACTACATACGAAG 58.215 37.037 0.00 0.00 41.03 3.79
5715 12899 8.687292 AGATTACACTATGGACTACATACGAA 57.313 34.615 0.00 0.00 41.03 3.85
5716 12900 8.155510 AGAGATTACACTATGGACTACATACGA 58.844 37.037 0.00 0.00 41.03 3.43
5717 12901 8.325421 AGAGATTACACTATGGACTACATACG 57.675 38.462 0.00 0.00 41.03 3.06
5743 12927 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
5744 12928 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
5745 12929 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5746 12930 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5747 12931 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5748 12932 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5749 12933 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5750 12934 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5752 12936 9.417561 CATATACTCCCTCCGTTCCTAAATATA 57.582 37.037 0.00 0.00 0.00 0.86
5753 12937 8.120538 TCATATACTCCCTCCGTTCCTAAATAT 58.879 37.037 0.00 0.00 0.00 1.28
5754 12938 7.472741 TCATATACTCCCTCCGTTCCTAAATA 58.527 38.462 0.00 0.00 0.00 1.40
5755 12939 6.320518 TCATATACTCCCTCCGTTCCTAAAT 58.679 40.000 0.00 0.00 0.00 1.40
5756 12940 5.708544 TCATATACTCCCTCCGTTCCTAAA 58.291 41.667 0.00 0.00 0.00 1.85
5757 12941 5.329191 TCATATACTCCCTCCGTTCCTAA 57.671 43.478 0.00 0.00 0.00 2.69
5758 12942 5.531753 ATCATATACTCCCTCCGTTCCTA 57.468 43.478 0.00 0.00 0.00 2.94
5759 12943 3.897657 TCATATACTCCCTCCGTTCCT 57.102 47.619 0.00 0.00 0.00 3.36
5760 12944 4.401837 GGTATCATATACTCCCTCCGTTCC 59.598 50.000 0.00 0.00 0.00 3.62
5761 12945 5.262804 AGGTATCATATACTCCCTCCGTTC 58.737 45.833 0.00 0.00 0.00 3.95
5762 12946 5.272405 AGGTATCATATACTCCCTCCGTT 57.728 43.478 0.00 0.00 0.00 4.44
5763 12947 4.949966 AGGTATCATATACTCCCTCCGT 57.050 45.455 0.00 0.00 0.00 4.69
5764 12948 5.262009 TGAAGGTATCATATACTCCCTCCG 58.738 45.833 0.00 0.00 31.50 4.63
5777 12961 7.568349 AGCATGAAACTAGAATGAAGGTATCA 58.432 34.615 0.00 0.00 43.67 2.15
5778 12962 8.443953 AAGCATGAAACTAGAATGAAGGTATC 57.556 34.615 0.00 0.00 0.00 2.24
5779 12963 9.905713 TTAAGCATGAAACTAGAATGAAGGTAT 57.094 29.630 0.00 0.00 0.00 2.73
5780 12964 9.733556 TTTAAGCATGAAACTAGAATGAAGGTA 57.266 29.630 0.00 0.00 0.00 3.08
5841 13025 2.654863 TGTCTATCTCTGCGTGATCCA 58.345 47.619 0.00 0.00 0.00 3.41
5944 13130 0.107831 TTGGTTCAACTAGCACGCCT 59.892 50.000 0.00 0.00 0.00 5.52
5945 13131 0.517316 CTTGGTTCAACTAGCACGCC 59.483 55.000 0.00 0.00 0.00 5.68
5947 13133 2.479837 TCACTTGGTTCAACTAGCACG 58.520 47.619 0.00 0.00 0.00 5.34
5974 13160 8.503428 AGTTCATATCAGGATGGAGAATAACT 57.497 34.615 0.00 0.00 36.16 2.24
6046 13233 4.389374 CATACAATACTTCCGCCCATCTT 58.611 43.478 0.00 0.00 0.00 2.40
6089 13277 5.592104 TGCGTGAAGAATACCATTCTCTA 57.408 39.130 2.06 0.00 0.00 2.43
6098 13286 4.158384 CAACCATGTTGCGTGAAGAATAC 58.842 43.478 0.00 0.00 0.00 1.89
6149 13337 2.250924 AGGGGCAACATTGAAGAAAGG 58.749 47.619 0.00 0.00 39.74 3.11
6181 13369 7.095270 AGGTACCTTGACTACATTTAAGAACG 58.905 38.462 9.21 0.00 0.00 3.95
6198 13386 4.099573 CCATAGAACACGATGAGGTACCTT 59.900 45.833 17.53 0.00 0.00 3.50
6282 13472 1.106285 GGTTGCCATTGGAGATGTCC 58.894 55.000 6.95 0.83 44.24 4.02
6283 13473 1.747355 CTGGTTGCCATTGGAGATGTC 59.253 52.381 6.95 0.00 30.82 3.06
6284 13474 1.843368 CTGGTTGCCATTGGAGATGT 58.157 50.000 6.95 0.00 30.82 3.06
6285 13475 0.458669 GCTGGTTGCCATTGGAGATG 59.541 55.000 6.95 0.00 35.15 2.90
6286 13476 0.040058 TGCTGGTTGCCATTGGAGAT 59.960 50.000 6.95 0.00 42.00 2.75
6287 13477 0.178967 TTGCTGGTTGCCATTGGAGA 60.179 50.000 6.95 0.00 42.00 3.71
6288 13478 0.680618 TTTGCTGGTTGCCATTGGAG 59.319 50.000 6.95 0.00 42.00 3.86
6289 13479 1.350071 ATTTGCTGGTTGCCATTGGA 58.650 45.000 6.95 0.00 42.00 3.53
6290 13480 2.188062 AATTTGCTGGTTGCCATTGG 57.812 45.000 0.00 0.00 42.00 3.16
6291 13481 2.485038 GGAAATTTGCTGGTTGCCATTG 59.515 45.455 1.93 0.00 42.00 2.82
6292 13482 2.372837 AGGAAATTTGCTGGTTGCCATT 59.627 40.909 11.84 0.00 42.00 3.16
6293 13483 1.980036 AGGAAATTTGCTGGTTGCCAT 59.020 42.857 11.84 0.00 42.00 4.40
6294 13484 1.344114 GAGGAAATTTGCTGGTTGCCA 59.656 47.619 17.69 0.00 42.00 4.92
6295 13485 1.338105 GGAGGAAATTTGCTGGTTGCC 60.338 52.381 17.69 7.73 42.00 4.52
6296 13486 1.338105 GGGAGGAAATTTGCTGGTTGC 60.338 52.381 17.69 1.89 43.25 4.17
6297 13487 1.067635 CGGGAGGAAATTTGCTGGTTG 60.068 52.381 17.69 0.54 0.00 3.77
6298 13488 1.256812 CGGGAGGAAATTTGCTGGTT 58.743 50.000 17.69 0.00 0.00 3.67
6299 13489 1.250840 GCGGGAGGAAATTTGCTGGT 61.251 55.000 17.69 0.00 0.00 4.00
6300 13490 1.512694 GCGGGAGGAAATTTGCTGG 59.487 57.895 17.69 7.22 0.00 4.85
6301 13491 1.137404 CGCGGGAGGAAATTTGCTG 59.863 57.895 17.69 4.08 0.00 4.41
6302 13492 1.303317 ACGCGGGAGGAAATTTGCT 60.303 52.632 12.49 12.49 0.00 3.91
6303 13493 1.136774 GACGCGGGAGGAAATTTGC 59.863 57.895 12.47 0.68 0.00 3.68
6304 13494 0.676782 AGGACGCGGGAGGAAATTTG 60.677 55.000 12.47 0.00 0.00 2.32
6305 13495 0.037734 AAGGACGCGGGAGGAAATTT 59.962 50.000 12.47 0.00 0.00 1.82
6306 13496 0.392595 GAAGGACGCGGGAGGAAATT 60.393 55.000 12.47 0.00 0.00 1.82
6307 13497 1.221021 GAAGGACGCGGGAGGAAAT 59.779 57.895 12.47 0.00 0.00 2.17
6308 13498 2.660802 GAAGGACGCGGGAGGAAA 59.339 61.111 12.47 0.00 0.00 3.13
6309 13499 3.387947 GGAAGGACGCGGGAGGAA 61.388 66.667 12.47 0.00 0.00 3.36
6319 13509 3.991536 GACTGCTCCGCGGAAGGAC 62.992 68.421 30.53 18.62 38.46 3.85
6320 13510 3.760035 GACTGCTCCGCGGAAGGA 61.760 66.667 30.53 21.77 38.46 3.36
6322 13512 4.116328 TCGACTGCTCCGCGGAAG 62.116 66.667 30.53 26.01 38.46 3.46
6323 13513 4.415332 GTCGACTGCTCCGCGGAA 62.415 66.667 30.53 14.93 38.46 4.30
6328 13518 4.813526 CGGTCGTCGACTGCTCCG 62.814 72.222 23.69 15.13 42.43 4.63
6329 13519 4.477975 CCGGTCGTCGACTGCTCC 62.478 72.222 25.69 8.58 42.43 4.70
6330 13520 3.664223 GACCGGTCGTCGACTGCTC 62.664 68.421 25.69 18.96 42.43 4.26
6331 13521 3.735029 GACCGGTCGTCGACTGCT 61.735 66.667 25.69 14.69 42.43 4.24
6332 13522 3.735029 AGACCGGTCGTCGACTGC 61.735 66.667 28.26 14.69 46.92 4.40
6333 13523 2.176055 CAGACCGGTCGTCGACTG 59.824 66.667 28.26 24.45 46.92 3.51
6334 13524 2.281345 ACAGACCGGTCGTCGACT 60.281 61.111 28.26 7.51 46.92 4.18
6335 13525 2.175322 GACAGACCGGTCGTCGAC 59.825 66.667 29.96 17.16 46.92 4.20
6341 13531 3.681835 ACCAGCGACAGACCGGTC 61.682 66.667 27.67 27.67 38.28 4.79
6342 13532 3.991051 CACCAGCGACAGACCGGT 61.991 66.667 6.92 6.92 41.25 5.28
6343 13533 4.742201 CCACCAGCGACAGACCGG 62.742 72.222 0.00 0.00 0.00 5.28
6344 13534 3.680786 TCCACCAGCGACAGACCG 61.681 66.667 0.00 0.00 0.00 4.79
6345 13535 2.048127 GTCCACCAGCGACAGACC 60.048 66.667 0.00 0.00 0.00 3.85
6346 13536 2.430921 CGTCCACCAGCGACAGAC 60.431 66.667 0.00 0.00 0.00 3.51
6347 13537 2.910479 ACGTCCACCAGCGACAGA 60.910 61.111 0.00 0.00 0.00 3.41
6348 13538 2.734723 CACGTCCACCAGCGACAG 60.735 66.667 0.00 0.00 0.00 3.51
6349 13539 3.207547 CTCACGTCCACCAGCGACA 62.208 63.158 0.00 0.00 0.00 4.35
6350 13540 2.430921 CTCACGTCCACCAGCGAC 60.431 66.667 0.00 0.00 0.00 5.19
6351 13541 3.680786 CCTCACGTCCACCAGCGA 61.681 66.667 0.00 0.00 0.00 4.93
6352 13542 3.916392 GACCTCACGTCCACCAGCG 62.916 68.421 0.00 0.00 35.23 5.18
6353 13543 2.048127 GACCTCACGTCCACCAGC 60.048 66.667 0.00 0.00 35.23 4.85
6360 13550 0.824109 TCCATCATGGACCTCACGTC 59.176 55.000 0.66 0.00 42.67 4.34
6361 13551 2.990977 TCCATCATGGACCTCACGT 58.009 52.632 0.66 0.00 42.67 4.49
6369 13559 2.737544 CACCACCATTTCCATCATGGA 58.262 47.619 0.66 0.66 46.61 3.41
6370 13560 1.137479 GCACCACCATTTCCATCATGG 59.863 52.381 0.00 0.00 46.07 3.66
6371 13561 2.104967 AGCACCACCATTTCCATCATG 58.895 47.619 0.00 0.00 0.00 3.07
6372 13562 2.104967 CAGCACCACCATTTCCATCAT 58.895 47.619 0.00 0.00 0.00 2.45
6373 13563 1.075212 TCAGCACCACCATTTCCATCA 59.925 47.619 0.00 0.00 0.00 3.07
6374 13564 1.474077 GTCAGCACCACCATTTCCATC 59.526 52.381 0.00 0.00 0.00 3.51
6375 13565 1.549203 GTCAGCACCACCATTTCCAT 58.451 50.000 0.00 0.00 0.00 3.41
6376 13566 0.888736 CGTCAGCACCACCATTTCCA 60.889 55.000 0.00 0.00 0.00 3.53
6377 13567 1.875963 CGTCAGCACCACCATTTCC 59.124 57.895 0.00 0.00 0.00 3.13
6378 13568 1.210155 GCGTCAGCACCACCATTTC 59.790 57.895 0.00 0.00 44.35 2.17
6379 13569 3.354678 GCGTCAGCACCACCATTT 58.645 55.556 0.00 0.00 44.35 2.32
6396 13586 4.415332 CCGGTGGGACGACGACAG 62.415 72.222 0.00 0.00 35.47 3.51
6407 13597 2.829914 CATCATGTGGCCCGGTGG 60.830 66.667 0.00 0.00 0.00 4.61
6408 13598 2.829914 CCATCATGTGGCCCGGTG 60.830 66.667 0.00 0.00 42.12 4.94
6416 13606 2.868583 GGATGAGACGAACCATCATGTG 59.131 50.000 14.06 0.00 40.55 3.21
6417 13607 2.501316 TGGATGAGACGAACCATCATGT 59.499 45.455 14.06 0.00 40.55 3.21
6418 13608 2.868583 GTGGATGAGACGAACCATCATG 59.131 50.000 14.06 0.00 40.55 3.07
6419 13609 2.501316 TGTGGATGAGACGAACCATCAT 59.499 45.455 14.06 5.55 40.55 2.45
6420 13610 1.899142 TGTGGATGAGACGAACCATCA 59.101 47.619 14.06 0.00 40.55 3.07
6421 13611 2.672961 TGTGGATGAGACGAACCATC 57.327 50.000 0.00 0.00 38.66 3.51
6422 13612 3.535561 GATTGTGGATGAGACGAACCAT 58.464 45.455 0.00 0.00 34.87 3.55
6423 13613 2.673893 CGATTGTGGATGAGACGAACCA 60.674 50.000 0.00 0.00 0.00 3.67
6424 13614 1.927174 CGATTGTGGATGAGACGAACC 59.073 52.381 0.00 0.00 0.00 3.62
6425 13615 1.324736 GCGATTGTGGATGAGACGAAC 59.675 52.381 0.00 0.00 0.00 3.95
6426 13616 1.640428 GCGATTGTGGATGAGACGAA 58.360 50.000 0.00 0.00 0.00 3.85
6427 13617 0.179111 GGCGATTGTGGATGAGACGA 60.179 55.000 0.00 0.00 0.00 4.20
6428 13618 0.179100 AGGCGATTGTGGATGAGACG 60.179 55.000 0.00 0.00 0.00 4.18
6429 13619 2.159099 TGTAGGCGATTGTGGATGAGAC 60.159 50.000 0.00 0.00 0.00 3.36
6430 13620 2.107366 TGTAGGCGATTGTGGATGAGA 58.893 47.619 0.00 0.00 0.00 3.27
6431 13621 2.602257 TGTAGGCGATTGTGGATGAG 57.398 50.000 0.00 0.00 0.00 2.90
6432 13622 2.236146 AGTTGTAGGCGATTGTGGATGA 59.764 45.455 0.00 0.00 0.00 2.92
6433 13623 2.352651 CAGTTGTAGGCGATTGTGGATG 59.647 50.000 0.00 0.00 0.00 3.51
6434 13624 2.632377 CAGTTGTAGGCGATTGTGGAT 58.368 47.619 0.00 0.00 0.00 3.41
6435 13625 1.943968 GCAGTTGTAGGCGATTGTGGA 60.944 52.381 0.00 0.00 0.00 4.02
6436 13626 0.447801 GCAGTTGTAGGCGATTGTGG 59.552 55.000 0.00 0.00 0.00 4.17
6437 13627 3.975992 GCAGTTGTAGGCGATTGTG 57.024 52.632 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.