Multiple sequence alignment - TraesCS5B01G050600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G050600 chr5B 100.000 4210 0 0 1 4210 55499953 55504162 0.000000e+00 7775.0
1 TraesCS5B01G050600 chr5B 88.506 261 28 1 250 508 27825040 27825300 8.790000e-82 315.0
2 TraesCS5B01G050600 chr5A 97.792 951 12 2 1 950 277325643 277324701 0.000000e+00 1631.0
3 TraesCS5B01G050600 chr5A 89.313 262 26 1 249 508 386169521 386169782 1.130000e-85 327.0
4 TraesCS5B01G050600 chr5A 94.828 174 6 3 792 963 74587800 74587972 6.940000e-68 268.0
5 TraesCS5B01G050600 chr1A 97.579 950 22 1 2 950 376979633 376980582 0.000000e+00 1626.0
6 TraesCS5B01G050600 chr1A 84.155 1319 110 39 1945 3183 6550964 6549665 0.000000e+00 1186.0
7 TraesCS5B01G050600 chr1A 84.609 1267 106 39 1987 3183 6537337 6536090 0.000000e+00 1177.0
8 TraesCS5B01G050600 chr1A 83.802 747 58 21 2326 3019 6567304 6568040 0.000000e+00 651.0
9 TraesCS5B01G050600 chr1A 85.215 372 29 15 3856 4210 4502611 4502973 4.000000e-95 359.0
10 TraesCS5B01G050600 chr1A 85.215 372 29 15 3856 4210 5499966 5499604 4.000000e-95 359.0
11 TraesCS5B01G050600 chr1A 85.215 372 29 15 3856 4210 5501444 5501082 4.000000e-95 359.0
12 TraesCS5B01G050600 chr1A 85.135 370 30 15 3856 4210 6336145 6335786 5.180000e-94 355.0
13 TraesCS5B01G050600 chr1A 77.415 704 89 31 1109 1780 6566213 6566878 5.180000e-94 355.0
14 TraesCS5B01G050600 chr1A 83.293 413 36 17 2797 3183 6538806 6538401 2.410000e-92 350.0
15 TraesCS5B01G050600 chr1A 82.892 415 36 17 2797 3183 6552375 6551968 1.450000e-89 340.0
16 TraesCS5B01G050600 chr1A 92.920 113 6 1 2110 2220 6567185 6567297 3.370000e-36 163.0
17 TraesCS5B01G050600 chr1A 97.959 49 1 0 2740 2788 6538887 6538839 7.500000e-13 86.1
18 TraesCS5B01G050600 chr2A 97.171 919 25 1 30 947 665831124 665832042 0.000000e+00 1552.0
19 TraesCS5B01G050600 chr2A 87.805 451 39 7 507 953 104888379 104887941 8.070000e-142 514.0
20 TraesCS5B01G050600 chr2A 82.972 323 35 17 643 950 104890090 104890407 1.490000e-69 274.0
21 TraesCS5B01G050600 chr2A 92.655 177 13 0 76 252 104888553 104888377 5.400000e-64 255.0
22 TraesCS5B01G050600 chr5D 89.588 874 62 21 3357 4204 52326280 52327150 0.000000e+00 1083.0
23 TraesCS5B01G050600 chr3A 84.810 1027 80 26 1801 2788 744391716 744390727 0.000000e+00 963.0
24 TraesCS5B01G050600 chr3A 88.789 446 36 5 507 950 746555446 746555013 6.200000e-148 534.0
25 TraesCS5B01G050600 chr3A 85.294 340 38 6 1446 1780 744392329 744391997 1.450000e-89 340.0
26 TraesCS5B01G050600 chr3A 95.480 177 8 0 76 252 746555620 746555444 2.480000e-72 283.0
27 TraesCS5B01G050600 chr3A 85.075 201 5 4 2804 2994 744390679 744390494 9.300000e-42 182.0
28 TraesCS5B01G050600 chr3B 85.517 939 67 29 1915 2788 822114038 822113104 0.000000e+00 917.0
29 TraesCS5B01G050600 chr3B 81.224 474 49 20 1340 1780 822115030 822114564 3.120000e-91 346.0
30 TraesCS5B01G050600 chr3B 80.687 233 27 11 2968 3183 822112969 822112738 9.360000e-37 165.0
31 TraesCS5B01G050600 chr3D 85.543 920 62 22 1915 2788 610206571 610205677 0.000000e+00 896.0
32 TraesCS5B01G050600 chr3D 91.903 247 8 3 2804 3038 610205629 610205383 6.740000e-88 335.0
33 TraesCS5B01G050600 chr3D 85.993 307 35 4 1475 1780 610207439 610207140 5.250000e-84 322.0
34 TraesCS5B01G050600 chr1B 83.239 1062 85 38 1798 2788 475148149 475147110 0.000000e+00 889.0
35 TraesCS5B01G050600 chr1B 86.792 318 18 7 2326 2623 8166530 8166843 2.430000e-87 333.0
36 TraesCS5B01G050600 chr1B 86.792 212 11 6 2804 3004 475147059 475146854 1.970000e-53 220.0
37 TraesCS5B01G050600 chr1B 87.293 181 22 1 507 686 61006470 61006650 5.520000e-49 206.0
38 TraesCS5B01G050600 chr1B 88.024 167 11 6 2901 3061 8167432 8167595 5.560000e-44 189.0
39 TraesCS5B01G050600 chr1B 82.500 200 21 7 3375 3571 6483012 6482824 3.370000e-36 163.0
40 TraesCS5B01G050600 chr1B 81.773 203 23 7 3372 3571 5758872 5759063 1.570000e-34 158.0
41 TraesCS5B01G050600 chr1B 80.000 240 21 12 3987 4199 6482356 6482117 7.290000e-33 152.0
42 TraesCS5B01G050600 chr1B 93.902 82 5 0 2701 2782 8166872 8166953 1.590000e-24 124.0
43 TraesCS5B01G050600 chr4D 89.755 449 41 5 507 952 439879115 439879561 1.700000e-158 569.0
44 TraesCS5B01G050600 chr4D 87.368 285 25 10 234 512 78773944 78773665 2.440000e-82 316.0
45 TraesCS5B01G050600 chr4D 84.564 298 21 15 677 955 439872690 439872399 5.360000e-69 272.0
46 TraesCS5B01G050600 chr4D 96.667 150 5 0 102 251 439878965 439879114 2.510000e-62 250.0
47 TraesCS5B01G050600 chr1D 86.066 488 30 12 2326 2788 5398019 5398493 1.360000e-134 490.0
48 TraesCS5B01G050600 chr1D 89.316 234 20 5 1989 2220 5397782 5398012 5.330000e-74 289.0
49 TraesCS5B01G050600 chr1D 78.827 392 38 25 3858 4210 3969712 3969327 5.480000e-54 222.0
50 TraesCS5B01G050600 chr1D 77.448 337 40 24 3896 4210 3617802 3618124 7.240000e-38 169.0
51 TraesCS5B01G050600 chr1D 80.870 230 20 5 3399 3614 3970308 3970089 4.360000e-35 159.0
52 TraesCS5B01G050600 chr1D 86.813 91 10 2 3635 3724 3970010 3969921 2.680000e-17 100.0
53 TraesCS5B01G050600 chr1D 90.769 65 3 1 2797 2861 5398526 5398587 2.700000e-12 84.2
54 TraesCS5B01G050600 chr4A 85.650 446 42 12 507 950 474920407 474919982 2.310000e-122 449.0
55 TraesCS5B01G050600 chr4A 94.915 177 9 0 76 252 474920581 474920405 1.150000e-70 278.0
56 TraesCS5B01G050600 chrUn 91.221 262 21 1 249 508 2213904 2213643 5.180000e-94 355.0
57 TraesCS5B01G050600 chrUn 89.850 266 24 2 249 511 129564171 129563906 5.210000e-89 339.0
58 TraesCS5B01G050600 chr7A 90.299 268 23 2 250 514 578444494 578444761 8.660000e-92 348.0
59 TraesCS5B01G050600 chr6B 89.773 264 25 1 249 510 113783175 113783438 1.880000e-88 337.0
60 TraesCS5B01G050600 chr2D 85.455 275 38 2 507 779 323523409 323523135 6.890000e-73 285.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G050600 chr5B 55499953 55504162 4209 False 7775.000000 7775 100.000000 1 4210 1 chr5B.!!$F2 4209
1 TraesCS5B01G050600 chr5A 277324701 277325643 942 True 1631.000000 1631 97.792000 1 950 1 chr5A.!!$R1 949
2 TraesCS5B01G050600 chr1A 376979633 376980582 949 False 1626.000000 1626 97.579000 2 950 1 chr1A.!!$F2 948
3 TraesCS5B01G050600 chr1A 6549665 6552375 2710 True 763.000000 1186 83.523500 1945 3183 2 chr1A.!!$R4 1238
4 TraesCS5B01G050600 chr1A 6536090 6538887 2797 True 537.700000 1177 88.620333 1987 3183 3 chr1A.!!$R3 1196
5 TraesCS5B01G050600 chr1A 6566213 6568040 1827 False 389.666667 651 84.712333 1109 3019 3 chr1A.!!$F3 1910
6 TraesCS5B01G050600 chr1A 5499604 5501444 1840 True 359.000000 359 85.215000 3856 4210 2 chr1A.!!$R2 354
7 TraesCS5B01G050600 chr2A 665831124 665832042 918 False 1552.000000 1552 97.171000 30 947 1 chr2A.!!$F2 917
8 TraesCS5B01G050600 chr2A 104887941 104888553 612 True 384.500000 514 90.230000 76 953 2 chr2A.!!$R1 877
9 TraesCS5B01G050600 chr5D 52326280 52327150 870 False 1083.000000 1083 89.588000 3357 4204 1 chr5D.!!$F1 847
10 TraesCS5B01G050600 chr3A 744390494 744392329 1835 True 495.000000 963 85.059667 1446 2994 3 chr3A.!!$R1 1548
11 TraesCS5B01G050600 chr3A 746555013 746555620 607 True 408.500000 534 92.134500 76 950 2 chr3A.!!$R2 874
12 TraesCS5B01G050600 chr3B 822112738 822115030 2292 True 476.000000 917 82.476000 1340 3183 3 chr3B.!!$R1 1843
13 TraesCS5B01G050600 chr3D 610205383 610207439 2056 True 517.666667 896 87.813000 1475 3038 3 chr3D.!!$R1 1563
14 TraesCS5B01G050600 chr1B 475146854 475148149 1295 True 554.500000 889 85.015500 1798 3004 2 chr1B.!!$R2 1206
15 TraesCS5B01G050600 chr1B 8166530 8167595 1065 False 215.333333 333 89.572667 2326 3061 3 chr1B.!!$F3 735
16 TraesCS5B01G050600 chr4D 439878965 439879561 596 False 409.500000 569 93.211000 102 952 2 chr4D.!!$F1 850
17 TraesCS5B01G050600 chr1D 5397782 5398587 805 False 287.733333 490 88.717000 1989 2861 3 chr1D.!!$F2 872
18 TraesCS5B01G050600 chr4A 474919982 474920581 599 True 363.500000 449 90.282500 76 950 2 chr4A.!!$R1 874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
991 1000 0.107848 CGTTGGGCCGGAATTCTAGT 60.108 55.0 5.05 0.0 0.0 2.57 F
1768 1844 0.038310 GGTGGTCAAGGAAAGGGGAG 59.962 60.0 0.00 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2433 3191 0.403271 AGGCTTGGCTCAGATTGTGT 59.597 50.0 0.0 0.0 0.0 3.72 R
3426 4624 0.039074 CGACCAAGAACAGAGCGACT 60.039 55.0 0.0 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 155 1.648504 GGTTATTTGGTCTCGGTCGG 58.351 55.000 0.00 0.00 0.00 4.79
180 181 7.118390 GTGAAGATATGCCAGTGGTTCATATAC 59.882 40.741 17.48 11.08 34.58 1.47
978 987 6.937436 ATAAAGTTTCCTAATAGCGTTGGG 57.063 37.500 0.00 1.66 0.00 4.12
979 988 2.640184 AGTTTCCTAATAGCGTTGGGC 58.360 47.619 3.01 0.00 44.05 5.36
980 989 1.674441 GTTTCCTAATAGCGTTGGGCC 59.326 52.381 0.00 0.00 45.17 5.80
981 990 0.179067 TTCCTAATAGCGTTGGGCCG 60.179 55.000 0.00 0.00 45.17 6.13
982 991 1.597027 CCTAATAGCGTTGGGCCGG 60.597 63.158 0.00 0.00 45.17 6.13
984 993 0.179067 CTAATAGCGTTGGGCCGGAA 60.179 55.000 5.05 0.00 45.17 4.30
985 994 0.470766 TAATAGCGTTGGGCCGGAAT 59.529 50.000 5.05 0.00 45.17 3.01
986 995 0.395173 AATAGCGTTGGGCCGGAATT 60.395 50.000 5.05 0.00 45.17 2.17
987 996 0.818040 ATAGCGTTGGGCCGGAATTC 60.818 55.000 5.05 0.00 45.17 2.17
988 997 1.906105 TAGCGTTGGGCCGGAATTCT 61.906 55.000 5.05 0.00 45.17 2.40
989 998 1.450669 GCGTTGGGCCGGAATTCTA 60.451 57.895 5.05 0.00 34.80 2.10
990 999 1.436983 GCGTTGGGCCGGAATTCTAG 61.437 60.000 5.05 0.03 34.80 2.43
991 1000 0.107848 CGTTGGGCCGGAATTCTAGT 60.108 55.000 5.05 0.00 0.00 2.57
992 1001 1.677820 CGTTGGGCCGGAATTCTAGTT 60.678 52.381 5.05 0.00 0.00 2.24
993 1002 2.443416 GTTGGGCCGGAATTCTAGTTT 58.557 47.619 5.05 0.00 0.00 2.66
995 1004 2.442413 TGGGCCGGAATTCTAGTTTTG 58.558 47.619 5.05 0.00 0.00 2.44
997 1006 1.134367 GGCCGGAATTCTAGTTTTGCC 59.866 52.381 5.05 4.90 0.00 4.52
998 1007 1.134367 GCCGGAATTCTAGTTTTGCCC 59.866 52.381 5.05 0.00 0.00 5.36
999 1008 2.723273 CCGGAATTCTAGTTTTGCCCT 58.277 47.619 5.23 0.00 0.00 5.19
1000 1009 2.683362 CCGGAATTCTAGTTTTGCCCTC 59.317 50.000 5.23 0.00 0.00 4.30
1001 1010 2.683362 CGGAATTCTAGTTTTGCCCTCC 59.317 50.000 5.23 0.00 0.00 4.30
1005 1014 4.657814 ATTCTAGTTTTGCCCTCCAGAA 57.342 40.909 0.00 0.00 0.00 3.02
1006 1015 3.418684 TCTAGTTTTGCCCTCCAGAAC 57.581 47.619 0.00 0.00 38.47 3.01
1007 1016 2.039879 TCTAGTTTTGCCCTCCAGAACC 59.960 50.000 0.00 0.00 38.85 3.62
1008 1017 0.537371 AGTTTTGCCCTCCAGAACCG 60.537 55.000 0.00 0.00 38.85 4.44
1010 1019 0.250727 TTTTGCCCTCCAGAACCGAG 60.251 55.000 0.00 0.00 0.00 4.63
1011 1020 2.748058 TTTGCCCTCCAGAACCGAGC 62.748 60.000 0.00 0.00 0.00 5.03
1014 1023 2.125912 CCTCCAGAACCGAGCGTG 60.126 66.667 0.00 0.00 0.00 5.34
1015 1024 2.811317 CTCCAGAACCGAGCGTGC 60.811 66.667 0.00 0.00 0.00 5.34
1016 1025 3.573772 CTCCAGAACCGAGCGTGCA 62.574 63.158 0.00 0.00 0.00 4.57
1017 1026 2.434884 CCAGAACCGAGCGTGCAT 60.435 61.111 0.00 0.00 0.00 3.96
1018 1027 2.034879 CCAGAACCGAGCGTGCATT 61.035 57.895 0.00 0.00 0.00 3.56
1019 1028 1.577328 CCAGAACCGAGCGTGCATTT 61.577 55.000 0.00 0.00 0.00 2.32
1021 1030 1.154225 GAACCGAGCGTGCATTTGG 60.154 57.895 0.00 0.00 0.00 3.28
1022 1031 2.527547 GAACCGAGCGTGCATTTGGG 62.528 60.000 0.00 0.00 0.00 4.12
1023 1032 4.481112 CCGAGCGTGCATTTGGGC 62.481 66.667 0.00 0.00 0.00 5.36
1024 1033 4.481112 CGAGCGTGCATTTGGGCC 62.481 66.667 0.00 0.00 0.00 5.80
1027 1036 4.049640 GCGTGCATTTGGGCCGAA 62.050 61.111 9.06 9.06 31.88 4.30
1028 1037 2.126502 CGTGCATTTGGGCCGAAC 60.127 61.111 8.77 0.00 31.88 3.95
1029 1038 2.261361 GTGCATTTGGGCCGAACC 59.739 61.111 8.77 3.67 37.93 3.62
1036 1045 1.381327 TTGGGCCGAACCAAACCAA 60.381 52.632 8.11 0.00 46.95 3.67
1037 1046 0.976073 TTGGGCCGAACCAAACCAAA 60.976 50.000 8.11 0.00 46.95 3.28
1038 1047 1.068417 GGGCCGAACCAAACCAAAC 59.932 57.895 0.00 0.00 42.05 2.93
1040 1049 1.677637 GGCCGAACCAAACCAAACCA 61.678 55.000 0.00 0.00 38.86 3.67
1041 1050 0.249280 GCCGAACCAAACCAAACCAG 60.249 55.000 0.00 0.00 0.00 4.00
1042 1051 1.394618 CCGAACCAAACCAAACCAGA 58.605 50.000 0.00 0.00 0.00 3.86
1043 1052 1.066454 CCGAACCAAACCAAACCAGAC 59.934 52.381 0.00 0.00 0.00 3.51
1044 1053 1.066454 CGAACCAAACCAAACCAGACC 59.934 52.381 0.00 0.00 0.00 3.85
1045 1054 1.411246 GAACCAAACCAAACCAGACCC 59.589 52.381 0.00 0.00 0.00 4.46
1046 1055 0.753848 ACCAAACCAAACCAGACCCG 60.754 55.000 0.00 0.00 0.00 5.28
1047 1056 0.466555 CCAAACCAAACCAGACCCGA 60.467 55.000 0.00 0.00 0.00 5.14
1049 1058 0.549469 AAACCAAACCAGACCCGAGT 59.451 50.000 0.00 0.00 0.00 4.18
1050 1059 0.179029 AACCAAACCAGACCCGAGTG 60.179 55.000 0.00 0.00 0.00 3.51
1051 1060 1.302511 CCAAACCAGACCCGAGTGG 60.303 63.158 0.00 0.00 39.98 4.00
1052 1061 1.752198 CAAACCAGACCCGAGTGGA 59.248 57.895 0.00 0.00 37.27 4.02
1053 1062 0.107831 CAAACCAGACCCGAGTGGAA 59.892 55.000 0.00 0.00 37.27 3.53
1055 1064 0.763223 AACCAGACCCGAGTGGAAGT 60.763 55.000 0.00 0.00 37.27 3.01
1058 1067 2.047179 GACCCGAGTGGAAGTGGC 60.047 66.667 0.00 0.00 37.49 5.01
1081 1090 3.922366 CCACCAGGGTTTCCTCCT 58.078 61.111 0.00 0.00 42.67 3.69
1082 1091 1.685820 CCACCAGGGTTTCCTCCTC 59.314 63.158 0.00 0.00 42.67 3.71
1083 1092 1.685820 CACCAGGGTTTCCTCCTCC 59.314 63.158 0.00 0.00 42.67 4.30
1085 1094 0.547954 ACCAGGGTTTCCTCCTCCTC 60.548 60.000 0.00 0.00 42.67 3.71
1087 1096 1.306226 AGGGTTTCCTCCTCCTCCG 60.306 63.158 0.00 0.00 39.80 4.63
1089 1098 1.615165 GGGTTTCCTCCTCCTCCGTC 61.615 65.000 0.00 0.00 0.00 4.79
1090 1099 0.615261 GGTTTCCTCCTCCTCCGTCT 60.615 60.000 0.00 0.00 0.00 4.18
1091 1100 0.818938 GTTTCCTCCTCCTCCGTCTC 59.181 60.000 0.00 0.00 0.00 3.36
1092 1101 0.705253 TTTCCTCCTCCTCCGTCTCT 59.295 55.000 0.00 0.00 0.00 3.10
1094 1103 1.152839 CCTCCTCCTCCGTCTCTCC 60.153 68.421 0.00 0.00 0.00 3.71
1095 1104 1.525077 CTCCTCCTCCGTCTCTCCG 60.525 68.421 0.00 0.00 0.00 4.63
1096 1105 3.213402 CCTCCTCCGTCTCTCCGC 61.213 72.222 0.00 0.00 0.00 5.54
1097 1106 3.578272 CTCCTCCGTCTCTCCGCG 61.578 72.222 0.00 0.00 0.00 6.46
1144 1153 1.430632 GCAGCCATGTCGTCCATTG 59.569 57.895 0.00 0.00 0.00 2.82
1145 1154 1.430632 CAGCCATGTCGTCCATTGC 59.569 57.895 6.00 6.00 41.39 3.56
1153 1162 1.618343 TGTCGTCCATTGCTTCTCTCA 59.382 47.619 0.00 0.00 0.00 3.27
1167 1176 1.743321 CTCTCATCGCCTCCAGGTCC 61.743 65.000 0.00 0.00 37.57 4.46
1168 1177 2.038813 TCATCGCCTCCAGGTCCA 59.961 61.111 0.00 0.00 37.57 4.02
1170 1179 3.474570 ATCGCCTCCAGGTCCAGC 61.475 66.667 0.00 0.00 37.57 4.85
1171 1180 3.991924 ATCGCCTCCAGGTCCAGCT 62.992 63.158 0.00 0.00 37.57 4.24
1217 1238 2.580815 CGCCATCTCTCAGGTGCA 59.419 61.111 0.00 0.00 0.00 4.57
1218 1239 1.078918 CGCCATCTCTCAGGTGCAA 60.079 57.895 0.00 0.00 0.00 4.08
1219 1240 0.674581 CGCCATCTCTCAGGTGCAAA 60.675 55.000 0.00 0.00 0.00 3.68
1221 1242 1.674962 GCCATCTCTCAGGTGCAAATC 59.325 52.381 0.00 0.00 0.00 2.17
1224 1245 3.349927 CATCTCTCAGGTGCAAATCCAA 58.650 45.455 0.00 0.00 0.00 3.53
1245 1274 5.271625 CAAATCTTGATCCTCGCTCAAATG 58.728 41.667 0.00 0.00 32.53 2.32
1258 1287 4.022068 TCGCTCAAATGCAAATCTTCCTTT 60.022 37.500 0.00 0.00 0.00 3.11
1261 1290 5.568223 GCTCAAATGCAAATCTTCCTTTCCT 60.568 40.000 0.00 0.00 0.00 3.36
1262 1291 6.423776 TCAAATGCAAATCTTCCTTTCCTT 57.576 33.333 0.00 0.00 0.00 3.36
1263 1292 7.537596 TCAAATGCAAATCTTCCTTTCCTTA 57.462 32.000 0.00 0.00 0.00 2.69
1264 1293 7.378181 TCAAATGCAAATCTTCCTTTCCTTAC 58.622 34.615 0.00 0.00 0.00 2.34
1265 1294 7.233348 TCAAATGCAAATCTTCCTTTCCTTACT 59.767 33.333 0.00 0.00 0.00 2.24
1268 1297 4.380973 GCAAATCTTCCTTTCCTTACTGCC 60.381 45.833 0.00 0.00 0.00 4.85
1287 1316 0.110238 CGGTTGTTCTTGTGCCGATG 60.110 55.000 0.00 0.00 44.57 3.84
1290 1319 2.384382 GTTGTTCTTGTGCCGATGTTG 58.616 47.619 0.00 0.00 0.00 3.33
1295 1324 3.057969 TCTTGTGCCGATGTTGATCTT 57.942 42.857 0.00 0.00 0.00 2.40
1304 1333 4.556501 GCCGATGTTGATCTTGTTTGTTCA 60.557 41.667 0.00 0.00 0.00 3.18
1306 1335 5.976534 CCGATGTTGATCTTGTTTGTTCAAA 59.023 36.000 0.00 0.00 30.50 2.69
1309 1338 6.586868 TGTTGATCTTGTTTGTTCAAATGC 57.413 33.333 1.33 0.00 30.50 3.56
1310 1339 6.104665 TGTTGATCTTGTTTGTTCAAATGCA 58.895 32.000 0.00 0.00 30.50 3.96
1312 1341 7.118825 TGTTGATCTTGTTTGTTCAAATGCAAA 59.881 29.630 0.00 0.00 30.50 3.68
1313 1342 7.789273 TGATCTTGTTTGTTCAAATGCAAAT 57.211 28.000 0.00 0.00 37.02 2.32
1315 1344 7.711772 TGATCTTGTTTGTTCAAATGCAAATCT 59.288 29.630 0.00 0.00 37.02 2.40
1329 1358 0.997196 AAATCTTTCTACCGCGCGAC 59.003 50.000 34.63 0.00 0.00 5.19
1330 1359 0.804933 AATCTTTCTACCGCGCGACC 60.805 55.000 34.63 0.00 0.00 4.79
1332 1361 1.872679 CTTTCTACCGCGCGACCTC 60.873 63.158 34.63 0.00 0.00 3.85
1333 1362 2.537792 CTTTCTACCGCGCGACCTCA 62.538 60.000 34.63 9.34 0.00 3.86
1334 1363 2.807631 TTTCTACCGCGCGACCTCAC 62.808 60.000 34.63 0.00 0.00 3.51
1377 1415 2.363795 TGCTCTCGGGGTTCGGAT 60.364 61.111 0.00 0.00 39.77 4.18
1380 1418 1.736586 CTCTCGGGGTTCGGATCAG 59.263 63.158 0.00 0.00 39.77 2.90
1383 1421 4.891727 CGGGGTTCGGATCAGCGG 62.892 72.222 0.00 0.00 34.75 5.52
1419 1467 4.634443 GGTAACCACCATTACAGTCATCAC 59.366 45.833 0.00 0.00 45.04 3.06
1422 1470 3.273434 CCACCATTACAGTCATCACAGG 58.727 50.000 0.00 0.00 0.00 4.00
1429 1477 1.274728 ACAGTCATCACAGGCAGTCTC 59.725 52.381 0.00 0.00 0.00 3.36
1433 1481 0.457443 CATCACAGGCAGTCTCGCTA 59.543 55.000 0.00 0.00 0.00 4.26
1435 1483 0.457443 TCACAGGCAGTCTCGCTATG 59.543 55.000 0.00 0.00 0.00 2.23
1436 1484 1.142748 ACAGGCAGTCTCGCTATGC 59.857 57.895 0.00 0.00 39.25 3.14
1450 1510 2.538333 CGCTATGCTGCTCAACATTGAC 60.538 50.000 0.00 0.00 32.90 3.18
1453 1513 1.527034 TGCTGCTCAACATTGACTCC 58.473 50.000 0.00 0.00 32.90 3.85
1465 1525 2.435372 TTGACTCCAATGTATGCCCC 57.565 50.000 0.00 0.00 0.00 5.80
1466 1526 0.550914 TGACTCCAATGTATGCCCCC 59.449 55.000 0.00 0.00 0.00 5.40
1467 1527 0.550914 GACTCCAATGTATGCCCCCA 59.449 55.000 0.00 0.00 0.00 4.96
1468 1528 1.006813 ACTCCAATGTATGCCCCCAA 58.993 50.000 0.00 0.00 0.00 4.12
1469 1529 1.063717 ACTCCAATGTATGCCCCCAAG 60.064 52.381 0.00 0.00 0.00 3.61
1477 1553 2.556840 TATGCCCCCAAGCTGCTGTC 62.557 60.000 1.35 0.00 0.00 3.51
1532 1608 3.470567 GTCGACGCGTTCCTGCAG 61.471 66.667 15.53 6.78 34.15 4.41
1544 1620 4.333926 GCGTTCCTGCAGAGAATAAAGAAT 59.666 41.667 17.39 0.00 34.15 2.40
1546 1622 6.292596 GCGTTCCTGCAGAGAATAAAGAATAG 60.293 42.308 17.39 7.12 34.15 1.73
1547 1623 6.292596 CGTTCCTGCAGAGAATAAAGAATAGC 60.293 42.308 17.39 0.91 0.00 2.97
1548 1624 5.292765 TCCTGCAGAGAATAAAGAATAGCG 58.707 41.667 17.39 0.00 0.00 4.26
1552 1628 4.319177 CAGAGAATAAAGAATAGCGGGGG 58.681 47.826 0.00 0.00 0.00 5.40
1584 1660 0.103937 CAGGAAGATCTGGTCTCGCC 59.896 60.000 0.00 0.00 35.67 5.54
1592 1668 3.685214 CTGGTCTCGCCGGTCTTCG 62.685 68.421 1.90 0.00 41.21 3.79
1643 1719 2.271800 CTCATCTACAACGGCAAGACC 58.728 52.381 0.00 0.00 0.00 3.85
1686 1762 0.620700 AGGGAAGGTCGGCCATAAGT 60.621 55.000 9.71 0.00 37.19 2.24
1711 1787 1.264826 GGAGTTTGCTTTTACGCGGAA 59.735 47.619 12.47 4.81 0.00 4.30
1727 1803 4.796495 AAACGGAGGCCCCATCGC 62.796 66.667 0.00 0.00 34.14 4.58
1768 1844 0.038310 GGTGGTCAAGGAAAGGGGAG 59.962 60.000 0.00 0.00 0.00 4.30
1773 1849 1.705745 GTCAAGGAAAGGGGAGGAAGT 59.294 52.381 0.00 0.00 0.00 3.01
1776 1852 2.239907 CAAGGAAAGGGGAGGAAGTAGG 59.760 54.545 0.00 0.00 0.00 3.18
1793 1886 0.603975 AGGAAGCGTGAAAGGTGAGC 60.604 55.000 0.00 0.00 0.00 4.26
1794 1887 1.493311 GAAGCGTGAAAGGTGAGCG 59.507 57.895 0.00 0.00 0.00 5.03
1795 1888 1.901650 GAAGCGTGAAAGGTGAGCGG 61.902 60.000 0.00 0.00 0.00 5.52
1814 2321 4.536364 CGGAAGCCATTACTATGTTGTG 57.464 45.455 0.00 0.00 0.00 3.33
1815 2322 3.242739 CGGAAGCCATTACTATGTTGTGC 60.243 47.826 0.00 0.00 0.00 4.57
1865 2372 6.764308 AAATGGATGTCTTGGTAGATTGTG 57.236 37.500 0.00 0.00 31.86 3.33
1866 2373 3.609853 TGGATGTCTTGGTAGATTGTGC 58.390 45.455 0.00 0.00 31.86 4.57
1867 2374 3.264193 TGGATGTCTTGGTAGATTGTGCT 59.736 43.478 0.00 0.00 31.86 4.40
1868 2375 4.469586 TGGATGTCTTGGTAGATTGTGCTA 59.530 41.667 0.00 0.00 31.86 3.49
1869 2376 5.053145 GGATGTCTTGGTAGATTGTGCTAG 58.947 45.833 0.00 0.00 31.86 3.42
1870 2377 5.395768 GGATGTCTTGGTAGATTGTGCTAGT 60.396 44.000 0.00 0.00 31.86 2.57
1871 2378 6.183360 GGATGTCTTGGTAGATTGTGCTAGTA 60.183 42.308 0.00 0.00 31.86 1.82
1872 2379 5.962433 TGTCTTGGTAGATTGTGCTAGTAC 58.038 41.667 3.70 3.70 31.86 2.73
1883 2390 5.940192 TTGTGCTAGTACATTCCAAACTG 57.060 39.130 14.75 0.00 0.00 3.16
1901 2408 8.826710 TCCAAACTGTATTCTTATTAGATTGCG 58.173 33.333 0.00 0.00 0.00 4.85
1920 2510 8.898761 AGATTGCGTGTAATTTCATTATTACCA 58.101 29.630 0.00 0.00 39.26 3.25
1921 2511 9.677567 GATTGCGTGTAATTTCATTATTACCAT 57.322 29.630 0.00 0.00 39.26 3.55
1923 2513 9.938670 TTGCGTGTAATTTCATTATTACCATAC 57.061 29.630 0.00 0.00 39.26 2.39
1964 2556 3.443681 CCAAGATTGGTTGGGTACATCAC 59.556 47.826 3.30 0.00 43.02 3.06
1987 2579 7.177216 TCACAAGTTATGGCAATCTGAATTCTT 59.823 33.333 7.05 0.00 0.00 2.52
2018 2640 6.569179 TTTTCTTCACTGTAGCCCATTTAC 57.431 37.500 0.00 0.00 0.00 2.01
2037 2659 7.655328 CCATTTACCTTGTAGCACAATTTCAAA 59.345 33.333 2.83 3.14 37.48 2.69
2051 2673 4.996788 ATTTCAAACTCTGGGCATGATC 57.003 40.909 0.00 0.00 0.00 2.92
2087 2709 8.738199 TTCGTGATAACACTAAAGTTGTAGAG 57.262 34.615 1.39 0.00 43.99 2.43
2091 2713 8.221766 GTGATAACACTAAAGTTGTAGAGTTGC 58.778 37.037 13.09 8.72 42.99 4.17
2100 2722 9.856488 CTAAAGTTGTAGAGTTGCTTGTATAGA 57.144 33.333 0.00 0.00 0.00 1.98
2222 2945 8.880750 GTTTTAAGGAGCTGTACCTTATAACTG 58.119 37.037 23.88 0.00 46.14 3.16
2226 2949 7.729124 AGGAGCTGTACCTTATAACTGTAAA 57.271 36.000 0.00 0.00 33.55 2.01
2230 2953 9.250624 GAGCTGTACCTTATAACTGTAAATCTG 57.749 37.037 0.00 0.00 0.00 2.90
2263 2986 2.333926 CGCACGTCAGGTTTCATCTTA 58.666 47.619 0.00 0.00 0.00 2.10
2323 3057 8.638873 TGACTGTGACGTTCAATATAATATCCT 58.361 33.333 0.00 0.00 0.00 3.24
2324 3058 8.818141 ACTGTGACGTTCAATATAATATCCTG 57.182 34.615 0.00 0.00 0.00 3.86
2377 3111 1.734465 GTGAATTCTCCTTCCTGTGCG 59.266 52.381 7.05 0.00 0.00 5.34
2428 3172 7.375834 TCTCTTTGTAAACGTGATATGTCAGT 58.624 34.615 0.00 0.00 34.36 3.41
2429 3173 7.328493 TCTCTTTGTAAACGTGATATGTCAGTG 59.672 37.037 0.00 0.00 34.36 3.66
2433 3191 7.148355 TGTAAACGTGATATGTCAGTGTAGA 57.852 36.000 0.00 0.00 34.36 2.59
2460 3218 0.401738 TGAGCCAAGCCTGTTAAGCT 59.598 50.000 0.00 0.00 44.19 3.74
2468 3226 1.923227 GCCTGTTAAGCTTCCGTGCC 61.923 60.000 0.00 0.00 0.00 5.01
2524 3286 7.156673 GCAATTGAGATGTATGGCCATAAATT 58.843 34.615 26.23 22.05 0.00 1.82
2539 3301 7.178274 TGGCCATAAATTAGTGAGATTGTTGTT 59.822 33.333 0.00 0.00 0.00 2.83
2590 3355 6.670077 TGGCTTGTTAAATTTGTTTTCACC 57.330 33.333 0.00 0.00 0.00 4.02
2608 3373 4.598022 TCACCATGGTTGCAAAGATCATA 58.402 39.130 16.84 0.00 0.00 2.15
2671 3455 4.180057 CCAGCTGTTTATCTCACTCTGTC 58.820 47.826 13.81 0.00 0.00 3.51
2672 3456 3.856521 CAGCTGTTTATCTCACTCTGTCG 59.143 47.826 5.25 0.00 0.00 4.35
2675 3459 5.590663 AGCTGTTTATCTCACTCTGTCGATA 59.409 40.000 0.00 0.00 0.00 2.92
2716 3514 2.947938 GATGGTGGGATGAGGGCGTG 62.948 65.000 0.00 0.00 0.00 5.34
2755 3553 7.661040 CACTTGAATCACCTTAATTTTCTGGT 58.339 34.615 0.00 0.00 0.00 4.00
2834 3672 3.009033 TGCTAGTGGTTCCAGCATAACTT 59.991 43.478 1.07 0.00 40.26 2.66
2836 3674 4.095036 GCTAGTGGTTCCAGCATAACTTTC 59.905 45.833 0.00 0.00 35.35 2.62
2844 3685 5.339008 TCCAGCATAACTTTCGAGTACAT 57.661 39.130 0.00 0.00 0.00 2.29
2861 3702 6.416455 CGAGTACATCTTCTATTCACTGAAGC 59.584 42.308 0.00 0.00 39.41 3.86
3038 4215 1.001520 TGCTGATTGCTGCTTTGCATT 59.998 42.857 0.00 0.00 42.96 3.56
3039 4216 1.659098 GCTGATTGCTGCTTTGCATTC 59.341 47.619 0.00 11.77 42.96 2.67
3040 4217 2.929161 GCTGATTGCTGCTTTGCATTCA 60.929 45.455 16.84 16.84 45.21 2.57
3041 4218 2.954316 TGATTGCTGCTTTGCATTCAG 58.046 42.857 15.11 0.00 43.69 3.02
3042 4219 2.268298 GATTGCTGCTTTGCATTCAGG 58.732 47.619 0.00 0.00 42.96 3.86
3044 4221 1.552578 TGCTGCTTTGCATTCAGGAT 58.447 45.000 0.00 0.00 38.13 3.24
3075 4271 5.957842 TTGCATATAATTAGCCCCTTTCG 57.042 39.130 0.00 0.00 0.00 3.46
3081 4277 5.632034 ATAATTAGCCCCTTTCGAGTCTT 57.368 39.130 0.00 0.00 0.00 3.01
3083 4279 5.431179 AATTAGCCCCTTTCGAGTCTTTA 57.569 39.130 0.00 0.00 0.00 1.85
3091 4287 5.585047 CCCCTTTCGAGTCTTTATTAACAGG 59.415 44.000 0.00 0.00 0.00 4.00
3092 4288 5.064834 CCCTTTCGAGTCTTTATTAACAGGC 59.935 44.000 0.00 0.00 0.00 4.85
3136 4334 2.031157 ACAAAATTTAGTCGCTTGCGCT 60.031 40.909 9.73 12.55 0.00 5.92
3164 4362 1.162698 CATGTGTCCTCTGTTGGCAG 58.837 55.000 0.00 0.00 43.87 4.85
3183 4381 3.196463 CAGCTGACAGATTTAGCCTCTG 58.804 50.000 8.42 0.00 44.60 3.35
3194 4392 8.236084 CAGATTTAGCCTCTGTTTTTGATTTG 57.764 34.615 0.00 0.00 36.26 2.32
3195 4393 7.869429 CAGATTTAGCCTCTGTTTTTGATTTGT 59.131 33.333 0.00 0.00 36.26 2.83
3196 4394 8.424133 AGATTTAGCCTCTGTTTTTGATTTGTT 58.576 29.630 0.00 0.00 0.00 2.83
3197 4395 8.962884 ATTTAGCCTCTGTTTTTGATTTGTTT 57.037 26.923 0.00 0.00 0.00 2.83
3198 4396 7.769272 TTAGCCTCTGTTTTTGATTTGTTTG 57.231 32.000 0.00 0.00 0.00 2.93
3199 4397 5.118286 AGCCTCTGTTTTTGATTTGTTTGG 58.882 37.500 0.00 0.00 0.00 3.28
3200 4398 4.875536 GCCTCTGTTTTTGATTTGTTTGGT 59.124 37.500 0.00 0.00 0.00 3.67
3201 4399 5.353956 GCCTCTGTTTTTGATTTGTTTGGTT 59.646 36.000 0.00 0.00 0.00 3.67
3202 4400 6.536941 GCCTCTGTTTTTGATTTGTTTGGTTA 59.463 34.615 0.00 0.00 0.00 2.85
3203 4401 7.065204 GCCTCTGTTTTTGATTTGTTTGGTTAA 59.935 33.333 0.00 0.00 0.00 2.01
3204 4402 8.387354 CCTCTGTTTTTGATTTGTTTGGTTAAC 58.613 33.333 0.00 0.00 37.26 2.01
3205 4403 9.150348 CTCTGTTTTTGATTTGTTTGGTTAACT 57.850 29.630 5.42 0.00 37.64 2.24
3206 4404 8.930760 TCTGTTTTTGATTTGTTTGGTTAACTG 58.069 29.630 5.42 0.00 37.64 3.16
3207 4405 8.833231 TGTTTTTGATTTGTTTGGTTAACTGA 57.167 26.923 5.42 0.00 37.64 3.41
3208 4406 9.442047 TGTTTTTGATTTGTTTGGTTAACTGAT 57.558 25.926 5.42 0.00 37.64 2.90
3209 4407 9.701355 GTTTTTGATTTGTTTGGTTAACTGATG 57.299 29.630 5.42 0.00 37.64 3.07
3210 4408 9.658799 TTTTTGATTTGTTTGGTTAACTGATGA 57.341 25.926 5.42 0.00 37.64 2.92
3211 4409 8.870160 TTTGATTTGTTTGGTTAACTGATGAG 57.130 30.769 5.42 0.00 37.64 2.90
3212 4410 7.815840 TGATTTGTTTGGTTAACTGATGAGA 57.184 32.000 5.42 0.00 37.64 3.27
3213 4411 8.231692 TGATTTGTTTGGTTAACTGATGAGAA 57.768 30.769 5.42 0.00 37.64 2.87
3214 4412 8.352201 TGATTTGTTTGGTTAACTGATGAGAAG 58.648 33.333 5.42 0.00 37.64 2.85
3215 4413 7.873719 TTTGTTTGGTTAACTGATGAGAAGA 57.126 32.000 5.42 0.00 37.64 2.87
3216 4414 6.861065 TGTTTGGTTAACTGATGAGAAGAC 57.139 37.500 5.42 0.00 37.64 3.01
3217 4415 6.353323 TGTTTGGTTAACTGATGAGAAGACA 58.647 36.000 5.42 0.00 37.64 3.41
3218 4416 6.260050 TGTTTGGTTAACTGATGAGAAGACAC 59.740 38.462 5.42 0.00 37.64 3.67
3219 4417 5.808366 TGGTTAACTGATGAGAAGACACT 57.192 39.130 5.42 0.00 0.00 3.55
3220 4418 5.541845 TGGTTAACTGATGAGAAGACACTG 58.458 41.667 5.42 0.00 0.00 3.66
3221 4419 4.932200 GGTTAACTGATGAGAAGACACTGG 59.068 45.833 5.42 0.00 0.00 4.00
3222 4420 2.758736 ACTGATGAGAAGACACTGGC 57.241 50.000 0.00 0.00 0.00 4.85
3223 4421 1.277557 ACTGATGAGAAGACACTGGCC 59.722 52.381 0.00 0.00 0.00 5.36
3224 4422 1.554160 CTGATGAGAAGACACTGGCCT 59.446 52.381 3.32 0.00 0.00 5.19
3225 4423 1.980765 TGATGAGAAGACACTGGCCTT 59.019 47.619 3.32 0.00 0.00 4.35
3226 4424 2.373169 TGATGAGAAGACACTGGCCTTT 59.627 45.455 3.32 0.00 0.00 3.11
3227 4425 3.181440 TGATGAGAAGACACTGGCCTTTT 60.181 43.478 3.32 0.00 0.00 2.27
3228 4426 4.041567 TGATGAGAAGACACTGGCCTTTTA 59.958 41.667 3.32 0.00 0.00 1.52
3229 4427 4.431416 TGAGAAGACACTGGCCTTTTAA 57.569 40.909 3.32 0.00 0.00 1.52
3230 4428 4.134563 TGAGAAGACACTGGCCTTTTAAC 58.865 43.478 3.32 0.00 0.00 2.01
3231 4429 4.141482 TGAGAAGACACTGGCCTTTTAACT 60.141 41.667 3.32 0.00 0.00 2.24
3232 4430 4.793201 AGAAGACACTGGCCTTTTAACTT 58.207 39.130 3.32 2.79 0.00 2.66
3233 4431 4.580580 AGAAGACACTGGCCTTTTAACTTG 59.419 41.667 3.32 0.00 0.00 3.16
3234 4432 3.898482 AGACACTGGCCTTTTAACTTGT 58.102 40.909 3.32 0.00 0.00 3.16
3235 4433 4.278310 AGACACTGGCCTTTTAACTTGTT 58.722 39.130 3.32 0.00 0.00 2.83
3236 4434 4.338400 AGACACTGGCCTTTTAACTTGTTC 59.662 41.667 3.32 0.00 0.00 3.18
3237 4435 4.020543 ACACTGGCCTTTTAACTTGTTCA 58.979 39.130 3.32 0.00 0.00 3.18
3238 4436 4.464597 ACACTGGCCTTTTAACTTGTTCAA 59.535 37.500 3.32 0.00 0.00 2.69
3239 4437 5.043248 CACTGGCCTTTTAACTTGTTCAAG 58.957 41.667 3.32 10.50 0.00 3.02
3240 4438 4.953579 ACTGGCCTTTTAACTTGTTCAAGA 59.046 37.500 17.75 0.00 0.00 3.02
3241 4439 5.598417 ACTGGCCTTTTAACTTGTTCAAGAT 59.402 36.000 17.75 9.57 0.00 2.40
3242 4440 6.775629 ACTGGCCTTTTAACTTGTTCAAGATA 59.224 34.615 17.75 8.64 0.00 1.98
3243 4441 6.977213 TGGCCTTTTAACTTGTTCAAGATAC 58.023 36.000 17.75 0.77 0.00 2.24
3244 4442 6.775629 TGGCCTTTTAACTTGTTCAAGATACT 59.224 34.615 17.75 3.86 0.00 2.12
3245 4443 7.286775 TGGCCTTTTAACTTGTTCAAGATACTT 59.713 33.333 17.75 5.69 0.00 2.24
3246 4444 8.141909 GGCCTTTTAACTTGTTCAAGATACTTT 58.858 33.333 17.75 5.37 0.00 2.66
3247 4445 9.529325 GCCTTTTAACTTGTTCAAGATACTTTT 57.471 29.630 17.75 4.77 0.00 2.27
3254 4452 9.573133 AACTTGTTCAAGATACTTTTTCAACTG 57.427 29.630 17.75 0.00 0.00 3.16
3255 4453 8.739972 ACTTGTTCAAGATACTTTTTCAACTGT 58.260 29.630 17.75 0.00 0.00 3.55
3256 4454 8.909708 TTGTTCAAGATACTTTTTCAACTGTG 57.090 30.769 0.00 0.00 0.00 3.66
3257 4455 7.479980 TGTTCAAGATACTTTTTCAACTGTGG 58.520 34.615 0.00 0.00 0.00 4.17
3258 4456 6.072112 TCAAGATACTTTTTCAACTGTGGC 57.928 37.500 0.00 0.00 0.00 5.01
3259 4457 5.827797 TCAAGATACTTTTTCAACTGTGGCT 59.172 36.000 0.00 0.00 0.00 4.75
3260 4458 6.321181 TCAAGATACTTTTTCAACTGTGGCTT 59.679 34.615 0.00 0.00 0.00 4.35
3261 4459 6.715347 AGATACTTTTTCAACTGTGGCTTT 57.285 33.333 0.00 0.00 0.00 3.51
3262 4460 7.817418 AGATACTTTTTCAACTGTGGCTTTA 57.183 32.000 0.00 0.00 0.00 1.85
3263 4461 8.409358 AGATACTTTTTCAACTGTGGCTTTAT 57.591 30.769 0.00 0.00 0.00 1.40
3264 4462 8.515414 AGATACTTTTTCAACTGTGGCTTTATC 58.485 33.333 0.00 0.00 0.00 1.75
3265 4463 6.715347 ACTTTTTCAACTGTGGCTTTATCT 57.285 33.333 0.00 0.00 0.00 1.98
3266 4464 6.507023 ACTTTTTCAACTGTGGCTTTATCTG 58.493 36.000 0.00 0.00 0.00 2.90
3267 4465 4.503741 TTTCAACTGTGGCTTTATCTGC 57.496 40.909 0.00 0.00 0.00 4.26
3268 4466 3.423539 TCAACTGTGGCTTTATCTGCT 57.576 42.857 0.00 0.00 0.00 4.24
3269 4467 3.076621 TCAACTGTGGCTTTATCTGCTG 58.923 45.455 0.00 0.00 0.00 4.41
3270 4468 2.119801 ACTGTGGCTTTATCTGCTGG 57.880 50.000 0.00 0.00 0.00 4.85
3271 4469 1.340405 ACTGTGGCTTTATCTGCTGGG 60.340 52.381 0.00 0.00 0.00 4.45
3272 4470 0.991146 TGTGGCTTTATCTGCTGGGA 59.009 50.000 0.00 0.00 0.00 4.37
3273 4471 1.565759 TGTGGCTTTATCTGCTGGGAT 59.434 47.619 0.00 0.00 0.00 3.85
3274 4472 2.777114 TGTGGCTTTATCTGCTGGGATA 59.223 45.455 0.00 0.00 0.00 2.59
3275 4473 3.142174 GTGGCTTTATCTGCTGGGATAC 58.858 50.000 0.00 0.00 0.00 2.24
3276 4474 3.048600 TGGCTTTATCTGCTGGGATACT 58.951 45.455 0.00 0.00 0.00 2.12
3277 4475 3.181451 TGGCTTTATCTGCTGGGATACTG 60.181 47.826 0.00 0.00 0.00 2.74
3278 4476 3.181450 GGCTTTATCTGCTGGGATACTGT 60.181 47.826 0.00 0.00 0.00 3.55
3279 4477 3.812053 GCTTTATCTGCTGGGATACTGTG 59.188 47.826 0.00 0.00 0.00 3.66
3280 4478 4.384056 CTTTATCTGCTGGGATACTGTGG 58.616 47.826 0.00 0.00 0.00 4.17
3281 4479 0.471617 ATCTGCTGGGATACTGTGGC 59.528 55.000 0.00 0.00 0.00 5.01
3282 4480 0.909133 TCTGCTGGGATACTGTGGCA 60.909 55.000 0.00 0.00 0.00 4.92
3283 4481 0.463295 CTGCTGGGATACTGTGGCAG 60.463 60.000 0.00 0.00 40.52 4.85
3285 4483 0.745845 GCTGGGATACTGTGGCAGTG 60.746 60.000 11.57 0.00 45.01 3.66
3286 4484 0.745845 CTGGGATACTGTGGCAGTGC 60.746 60.000 6.55 6.55 45.01 4.40
3287 4485 1.200760 TGGGATACTGTGGCAGTGCT 61.201 55.000 16.11 0.00 45.01 4.40
3288 4486 0.745845 GGGATACTGTGGCAGTGCTG 60.746 60.000 16.11 5.80 45.01 4.41
3289 4487 0.745845 GGATACTGTGGCAGTGCTGG 60.746 60.000 16.11 5.44 45.01 4.85
3300 4498 2.359900 GCAGTGCTGGCTATAACTTGT 58.640 47.619 8.18 0.00 0.00 3.16
3301 4499 2.352960 GCAGTGCTGGCTATAACTTGTC 59.647 50.000 8.18 0.00 0.00 3.18
3302 4500 3.866651 CAGTGCTGGCTATAACTTGTCT 58.133 45.455 0.00 0.00 0.00 3.41
3303 4501 3.620374 CAGTGCTGGCTATAACTTGTCTG 59.380 47.826 0.00 0.00 0.00 3.51
3304 4502 3.515502 AGTGCTGGCTATAACTTGTCTGA 59.484 43.478 0.00 0.00 0.00 3.27
3305 4503 3.868077 GTGCTGGCTATAACTTGTCTGAG 59.132 47.826 0.00 0.00 0.00 3.35
3306 4504 3.769300 TGCTGGCTATAACTTGTCTGAGA 59.231 43.478 0.00 0.00 0.00 3.27
3307 4505 4.222810 TGCTGGCTATAACTTGTCTGAGAA 59.777 41.667 0.00 0.00 0.00 2.87
3308 4506 5.178797 GCTGGCTATAACTTGTCTGAGAAA 58.821 41.667 0.00 0.00 0.00 2.52
3309 4507 5.064071 GCTGGCTATAACTTGTCTGAGAAAC 59.936 44.000 0.00 0.00 0.00 2.78
3310 4508 6.360370 TGGCTATAACTTGTCTGAGAAACT 57.640 37.500 0.00 0.00 0.00 2.66
3311 4509 6.769512 TGGCTATAACTTGTCTGAGAAACTT 58.230 36.000 0.00 0.00 0.00 2.66
3312 4510 7.224297 TGGCTATAACTTGTCTGAGAAACTTT 58.776 34.615 0.00 0.00 0.00 2.66
3313 4511 7.387948 TGGCTATAACTTGTCTGAGAAACTTTC 59.612 37.037 0.00 0.00 0.00 2.62
3314 4512 7.148390 GGCTATAACTTGTCTGAGAAACTTTCC 60.148 40.741 0.00 0.00 0.00 3.13
3315 4513 7.387948 GCTATAACTTGTCTGAGAAACTTTCCA 59.612 37.037 0.00 0.00 0.00 3.53
3316 4514 7.736447 ATAACTTGTCTGAGAAACTTTCCAG 57.264 36.000 11.14 11.14 32.61 3.86
3317 4515 3.879892 ACTTGTCTGAGAAACTTTCCAGC 59.120 43.478 12.01 9.31 31.90 4.85
3318 4516 3.558931 TGTCTGAGAAACTTTCCAGCA 57.441 42.857 12.01 10.87 31.90 4.41
3319 4517 3.206150 TGTCTGAGAAACTTTCCAGCAC 58.794 45.455 12.01 11.41 31.90 4.40
3320 4518 3.118261 TGTCTGAGAAACTTTCCAGCACT 60.118 43.478 12.01 0.00 31.90 4.40
3321 4519 3.496507 GTCTGAGAAACTTTCCAGCACTC 59.503 47.826 12.01 0.00 31.90 3.51
3322 4520 3.389329 TCTGAGAAACTTTCCAGCACTCT 59.611 43.478 12.01 0.00 31.90 3.24
3323 4521 3.470709 TGAGAAACTTTCCAGCACTCTG 58.529 45.455 0.00 0.00 40.02 3.35
3324 4522 2.225255 GAGAAACTTTCCAGCACTCTGC 59.775 50.000 0.00 0.00 45.46 4.26
3333 4531 2.282040 GCACTCTGCAGCTTGGGT 60.282 61.111 9.47 0.00 44.26 4.51
3334 4532 2.623915 GCACTCTGCAGCTTGGGTG 61.624 63.158 9.47 12.83 44.26 4.61
3335 4533 1.228063 CACTCTGCAGCTTGGGTGT 60.228 57.895 9.47 0.00 33.19 4.16
3336 4534 0.820891 CACTCTGCAGCTTGGGTGTT 60.821 55.000 9.47 0.00 33.19 3.32
3337 4535 0.820891 ACTCTGCAGCTTGGGTGTTG 60.821 55.000 9.47 0.00 33.19 3.33
3338 4536 0.820891 CTCTGCAGCTTGGGTGTTGT 60.821 55.000 9.47 0.00 33.19 3.32
3339 4537 1.102809 TCTGCAGCTTGGGTGTTGTG 61.103 55.000 9.47 0.00 33.19 3.33
3340 4538 2.079020 CTGCAGCTTGGGTGTTGTGG 62.079 60.000 0.00 0.00 33.19 4.17
3341 4539 1.827789 GCAGCTTGGGTGTTGTGGA 60.828 57.895 0.00 0.00 33.19 4.02
3342 4540 1.181098 GCAGCTTGGGTGTTGTGGAT 61.181 55.000 0.00 0.00 33.19 3.41
3343 4541 1.331214 CAGCTTGGGTGTTGTGGATT 58.669 50.000 0.00 0.00 0.00 3.01
3344 4542 1.688197 CAGCTTGGGTGTTGTGGATTT 59.312 47.619 0.00 0.00 0.00 2.17
3345 4543 2.102925 CAGCTTGGGTGTTGTGGATTTT 59.897 45.455 0.00 0.00 0.00 1.82
3346 4544 2.365293 AGCTTGGGTGTTGTGGATTTTC 59.635 45.455 0.00 0.00 0.00 2.29
3347 4545 2.365293 GCTTGGGTGTTGTGGATTTTCT 59.635 45.455 0.00 0.00 0.00 2.52
3348 4546 3.181466 GCTTGGGTGTTGTGGATTTTCTT 60.181 43.478 0.00 0.00 0.00 2.52
3349 4547 4.370917 CTTGGGTGTTGTGGATTTTCTTG 58.629 43.478 0.00 0.00 0.00 3.02
3350 4548 2.697751 TGGGTGTTGTGGATTTTCTTGG 59.302 45.455 0.00 0.00 0.00 3.61
3351 4549 2.962421 GGGTGTTGTGGATTTTCTTGGA 59.038 45.455 0.00 0.00 0.00 3.53
3352 4550 3.578282 GGGTGTTGTGGATTTTCTTGGAT 59.422 43.478 0.00 0.00 0.00 3.41
3353 4551 4.559153 GGTGTTGTGGATTTTCTTGGATG 58.441 43.478 0.00 0.00 0.00 3.51
3354 4552 4.280677 GGTGTTGTGGATTTTCTTGGATGA 59.719 41.667 0.00 0.00 0.00 2.92
3355 4553 5.047092 GGTGTTGTGGATTTTCTTGGATGAT 60.047 40.000 0.00 0.00 0.00 2.45
3383 4581 2.157738 GTCCTTGATTGTTGCTCTGCT 58.842 47.619 0.00 0.00 0.00 4.24
3417 4615 7.021790 GGCTGTTATTGCTTCTACAACTTAAC 58.978 38.462 0.00 0.00 30.75 2.01
3426 4624 2.139917 CTACAACTTAACTGTGCCGCA 58.860 47.619 0.00 0.00 0.00 5.69
3483 4681 1.505353 GTGTAGGGTGTCGAGTCGG 59.495 63.158 13.54 0.00 0.00 4.79
3497 4695 0.387202 AGTCGGGCATCTCTGAATCG 59.613 55.000 0.00 0.00 0.00 3.34
3511 4709 0.667792 GAATCGACATCCTAGGCCGC 60.668 60.000 2.96 0.00 0.00 6.53
3542 4740 2.156917 TCTTGATCTGGTTTGCTGCTG 58.843 47.619 0.00 0.00 0.00 4.41
3603 4801 1.269448 CATGTACCCCAGTGTTGTTGC 59.731 52.381 0.00 0.00 0.00 4.17
3717 4916 2.261671 GCAAAGCAGCAGCAGCAT 59.738 55.556 12.92 0.00 45.49 3.79
3720 4919 0.173481 CAAAGCAGCAGCAGCATCAT 59.827 50.000 12.92 0.00 45.49 2.45
3769 4968 9.573166 CTATAATGGTTATTCAAACTCATCCCA 57.427 33.333 0.00 0.00 0.00 4.37
3773 4972 5.835819 TGGTTATTCAAACTCATCCCAAACA 59.164 36.000 0.00 0.00 0.00 2.83
3784 4983 1.464734 TCCCAAACAAAACGAGCACA 58.535 45.000 0.00 0.00 0.00 4.57
3792 4991 6.035542 CCAAACAAAACGAGCACAGTTATTTT 59.964 34.615 0.00 0.00 0.00 1.82
3793 4992 7.221067 CCAAACAAAACGAGCACAGTTATTTTA 59.779 33.333 0.00 0.00 0.00 1.52
3794 4993 7.673810 AACAAAACGAGCACAGTTATTTTAC 57.326 32.000 0.00 0.00 0.00 2.01
3795 4994 6.203647 ACAAAACGAGCACAGTTATTTTACC 58.796 36.000 0.00 0.00 0.00 2.85
3807 5006 7.540745 CACAGTTATTTTACCTAAACATGCCAC 59.459 37.037 0.00 0.00 0.00 5.01
3809 5008 6.655848 AGTTATTTTACCTAAACATGCCACGA 59.344 34.615 0.00 0.00 0.00 4.35
3811 5010 3.688694 TTACCTAAACATGCCACGACT 57.311 42.857 0.00 0.00 0.00 4.18
3849 5048 7.387948 AGCAGCCATTTTACCTAAATATACTCG 59.612 37.037 0.00 0.00 34.69 4.18
3977 6661 3.277133 CACCGGTGCAATCCCTTG 58.723 61.111 24.02 0.00 35.36 3.61
3978 6662 1.303236 CACCGGTGCAATCCCTTGA 60.303 57.895 24.02 0.00 34.04 3.02
4035 6719 2.091541 TCACCGAAAATCCATTCAGGC 58.908 47.619 0.00 0.00 37.29 4.85
4039 6756 4.339247 CACCGAAAATCCATTCAGGCTATT 59.661 41.667 0.00 0.00 37.29 1.73
4064 6782 3.491342 TCATCCCGACAAACCAAAATCA 58.509 40.909 0.00 0.00 0.00 2.57
4087 6805 0.240411 GTACGACACCTCGCTCACTT 59.760 55.000 0.00 0.00 44.33 3.16
4153 6874 2.176273 GCTGACGCATGCCTCGAAT 61.176 57.895 13.15 0.00 35.78 3.34
4199 6920 1.903877 CGGGTCCTGGATGTTGCTCT 61.904 60.000 0.00 0.00 0.00 4.09
4204 6925 2.027192 GTCCTGGATGTTGCTCTGGTAA 60.027 50.000 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 155 3.609853 TGAACCACTGGCATATCTTCAC 58.390 45.455 0.00 0.00 0.00 3.18
180 181 1.078759 CCGCTGTTCACTAGCTTCGG 61.079 60.000 0.00 0.00 39.00 4.30
953 962 7.012610 GCCCAACGCTATTAGGAAACTTTATTA 59.987 37.037 0.00 0.00 43.67 0.98
954 963 6.183360 GCCCAACGCTATTAGGAAACTTTATT 60.183 38.462 0.00 0.00 43.67 1.40
957 966 3.442625 GCCCAACGCTATTAGGAAACTTT 59.557 43.478 0.00 0.00 43.67 2.66
958 967 3.014623 GCCCAACGCTATTAGGAAACTT 58.985 45.455 0.00 0.00 43.67 2.66
959 968 2.682858 GGCCCAACGCTATTAGGAAACT 60.683 50.000 0.00 0.00 40.66 2.66
960 969 1.674441 GGCCCAACGCTATTAGGAAAC 59.326 52.381 0.00 0.00 37.74 2.78
961 970 1.744456 CGGCCCAACGCTATTAGGAAA 60.744 52.381 0.00 0.00 37.74 3.13
962 971 0.179067 CGGCCCAACGCTATTAGGAA 60.179 55.000 0.00 0.00 37.74 3.36
964 973 1.597027 CCGGCCCAACGCTATTAGG 60.597 63.158 0.00 0.00 37.74 2.69
965 974 0.179067 TTCCGGCCCAACGCTATTAG 60.179 55.000 0.00 0.00 37.74 1.73
966 975 0.470766 ATTCCGGCCCAACGCTATTA 59.529 50.000 0.00 0.00 37.74 0.98
967 976 0.395173 AATTCCGGCCCAACGCTATT 60.395 50.000 0.00 0.00 37.74 1.73
968 977 0.818040 GAATTCCGGCCCAACGCTAT 60.818 55.000 0.00 0.00 37.74 2.97
970 979 1.906105 TAGAATTCCGGCCCAACGCT 61.906 55.000 0.65 0.00 37.74 5.07
972 981 0.107848 ACTAGAATTCCGGCCCAACG 60.108 55.000 0.65 0.00 0.00 4.10
973 982 2.124277 AACTAGAATTCCGGCCCAAC 57.876 50.000 0.65 0.00 0.00 3.77
974 983 2.823154 CAAAACTAGAATTCCGGCCCAA 59.177 45.455 0.65 0.00 0.00 4.12
975 984 2.442413 CAAAACTAGAATTCCGGCCCA 58.558 47.619 0.65 0.00 0.00 5.36
976 985 1.134367 GCAAAACTAGAATTCCGGCCC 59.866 52.381 0.65 0.00 0.00 5.80
977 986 1.134367 GGCAAAACTAGAATTCCGGCC 59.866 52.381 0.65 0.00 0.00 6.13
978 987 1.134367 GGGCAAAACTAGAATTCCGGC 59.866 52.381 0.65 0.00 0.00 6.13
979 988 2.683362 GAGGGCAAAACTAGAATTCCGG 59.317 50.000 0.65 0.00 0.00 5.14
980 989 2.683362 GGAGGGCAAAACTAGAATTCCG 59.317 50.000 0.65 0.00 0.00 4.30
981 990 3.696548 CTGGAGGGCAAAACTAGAATTCC 59.303 47.826 0.65 0.00 0.00 3.01
982 991 4.589908 TCTGGAGGGCAAAACTAGAATTC 58.410 43.478 0.00 0.00 0.00 2.17
984 993 4.336280 GTTCTGGAGGGCAAAACTAGAAT 58.664 43.478 0.00 0.00 34.71 2.40
985 994 3.497942 GGTTCTGGAGGGCAAAACTAGAA 60.498 47.826 0.00 0.00 0.00 2.10
986 995 2.039879 GGTTCTGGAGGGCAAAACTAGA 59.960 50.000 0.00 0.00 0.00 2.43
987 996 2.437413 GGTTCTGGAGGGCAAAACTAG 58.563 52.381 0.00 0.00 0.00 2.57
988 997 1.271163 CGGTTCTGGAGGGCAAAACTA 60.271 52.381 0.00 0.00 0.00 2.24
989 998 0.537371 CGGTTCTGGAGGGCAAAACT 60.537 55.000 0.00 0.00 0.00 2.66
990 999 0.536460 TCGGTTCTGGAGGGCAAAAC 60.536 55.000 0.00 0.00 0.00 2.43
991 1000 0.250727 CTCGGTTCTGGAGGGCAAAA 60.251 55.000 0.00 0.00 0.00 2.44
992 1001 1.374947 CTCGGTTCTGGAGGGCAAA 59.625 57.895 0.00 0.00 0.00 3.68
993 1002 3.068881 CTCGGTTCTGGAGGGCAA 58.931 61.111 0.00 0.00 0.00 4.52
995 1004 4.821589 CGCTCGGTTCTGGAGGGC 62.822 72.222 0.00 0.00 37.60 5.19
997 1006 2.125912 CACGCTCGGTTCTGGAGG 60.126 66.667 0.00 0.00 32.10 4.30
998 1007 2.811317 GCACGCTCGGTTCTGGAG 60.811 66.667 0.00 0.00 34.62 3.86
999 1008 2.449031 AATGCACGCTCGGTTCTGGA 62.449 55.000 0.00 0.00 0.00 3.86
1000 1009 1.577328 AAATGCACGCTCGGTTCTGG 61.577 55.000 0.00 0.00 0.00 3.86
1001 1010 0.453282 CAAATGCACGCTCGGTTCTG 60.453 55.000 0.00 0.00 0.00 3.02
1005 1014 3.055719 CCCAAATGCACGCTCGGT 61.056 61.111 0.00 0.00 0.00 4.69
1006 1015 4.481112 GCCCAAATGCACGCTCGG 62.481 66.667 0.00 0.00 0.00 4.63
1007 1016 4.481112 GGCCCAAATGCACGCTCG 62.481 66.667 0.00 0.00 0.00 5.03
1008 1017 4.481112 CGGCCCAAATGCACGCTC 62.481 66.667 0.00 0.00 0.00 5.03
1010 1019 4.049640 TTCGGCCCAAATGCACGC 62.050 61.111 0.00 0.00 0.00 5.34
1011 1020 2.126502 GTTCGGCCCAAATGCACG 60.127 61.111 0.00 0.00 0.00 5.34
1014 1023 1.369321 TTTGGTTCGGCCCAAATGC 59.631 52.632 13.32 0.00 46.80 3.56
1018 1027 0.976073 TTTGGTTTGGTTCGGCCCAA 60.976 50.000 0.00 3.00 42.69 4.12
1019 1028 1.381327 TTTGGTTTGGTTCGGCCCA 60.381 52.632 0.00 0.00 36.04 5.36
1021 1030 1.068417 GGTTTGGTTTGGTTCGGCC 59.932 57.895 0.00 0.00 37.90 6.13
1022 1031 0.249280 CTGGTTTGGTTTGGTTCGGC 60.249 55.000 0.00 0.00 0.00 5.54
1023 1032 1.066454 GTCTGGTTTGGTTTGGTTCGG 59.934 52.381 0.00 0.00 0.00 4.30
1024 1033 1.066454 GGTCTGGTTTGGTTTGGTTCG 59.934 52.381 0.00 0.00 0.00 3.95
1027 1036 0.753848 CGGGTCTGGTTTGGTTTGGT 60.754 55.000 0.00 0.00 0.00 3.67
1028 1037 0.466555 TCGGGTCTGGTTTGGTTTGG 60.467 55.000 0.00 0.00 0.00 3.28
1029 1038 0.951558 CTCGGGTCTGGTTTGGTTTG 59.048 55.000 0.00 0.00 0.00 2.93
1032 1041 1.450211 CACTCGGGTCTGGTTTGGT 59.550 57.895 0.00 0.00 0.00 3.67
1033 1042 1.302511 CCACTCGGGTCTGGTTTGG 60.303 63.158 0.00 0.00 0.00 3.28
1034 1043 0.107831 TTCCACTCGGGTCTGGTTTG 59.892 55.000 0.00 0.00 38.11 2.93
1036 1045 0.763223 ACTTCCACTCGGGTCTGGTT 60.763 55.000 0.00 0.00 38.11 3.67
1037 1046 1.152312 ACTTCCACTCGGGTCTGGT 60.152 57.895 0.00 0.00 38.11 4.00
1038 1047 1.293498 CACTTCCACTCGGGTCTGG 59.707 63.158 0.00 0.00 38.11 3.86
1040 1049 2.584391 GCCACTTCCACTCGGGTCT 61.584 63.158 0.00 0.00 38.11 3.85
1041 1050 2.047179 GCCACTTCCACTCGGGTC 60.047 66.667 0.00 0.00 38.11 4.46
1042 1051 4.003788 CGCCACTTCCACTCGGGT 62.004 66.667 0.00 0.00 38.11 5.28
1065 1074 0.842467 AGGAGGAGGAAACCCTGGTG 60.842 60.000 0.00 0.00 33.25 4.17
1067 1076 1.275421 GGAGGAGGAGGAAACCCTGG 61.275 65.000 0.00 0.00 33.25 4.45
1068 1077 1.617947 CGGAGGAGGAGGAAACCCTG 61.618 65.000 0.00 0.00 33.25 4.45
1069 1078 1.306226 CGGAGGAGGAGGAAACCCT 60.306 63.158 0.00 0.00 36.57 4.34
1071 1080 0.615261 AGACGGAGGAGGAGGAAACC 60.615 60.000 0.00 0.00 0.00 3.27
1072 1081 0.818938 GAGACGGAGGAGGAGGAAAC 59.181 60.000 0.00 0.00 0.00 2.78
1074 1083 0.256464 GAGAGACGGAGGAGGAGGAA 59.744 60.000 0.00 0.00 0.00 3.36
1076 1085 1.152839 GGAGAGACGGAGGAGGAGG 60.153 68.421 0.00 0.00 0.00 4.30
1077 1086 1.525077 CGGAGAGACGGAGGAGGAG 60.525 68.421 0.00 0.00 0.00 3.69
1078 1087 2.590645 CGGAGAGACGGAGGAGGA 59.409 66.667 0.00 0.00 0.00 3.71
1079 1088 3.213402 GCGGAGAGACGGAGGAGG 61.213 72.222 0.00 0.00 0.00 4.30
1138 1147 1.473965 GGCGATGAGAGAAGCAATGGA 60.474 52.381 0.00 0.00 0.00 3.41
1139 1148 0.942962 GGCGATGAGAGAAGCAATGG 59.057 55.000 0.00 0.00 0.00 3.16
1140 1149 1.865970 GAGGCGATGAGAGAAGCAATG 59.134 52.381 0.00 0.00 0.00 2.82
1144 1153 0.249405 CTGGAGGCGATGAGAGAAGC 60.249 60.000 0.00 0.00 0.00 3.86
1145 1154 0.388659 CCTGGAGGCGATGAGAGAAG 59.611 60.000 0.00 0.00 0.00 2.85
1153 1162 3.474570 GCTGGACCTGGAGGCGAT 61.475 66.667 0.00 0.00 39.32 4.58
1200 1209 0.674581 TTTGCACCTGAGAGATGGCG 60.675 55.000 0.00 0.00 0.00 5.69
1217 1238 4.530875 AGCGAGGATCAAGATTTGGATTT 58.469 39.130 0.00 0.00 33.17 2.17
1218 1239 4.133078 GAGCGAGGATCAAGATTTGGATT 58.867 43.478 0.00 0.00 33.17 3.01
1219 1240 3.135348 TGAGCGAGGATCAAGATTTGGAT 59.865 43.478 0.00 0.00 33.17 3.41
1221 1242 2.910199 TGAGCGAGGATCAAGATTTGG 58.090 47.619 0.00 0.00 33.17 3.28
1224 1245 3.314635 GCATTTGAGCGAGGATCAAGATT 59.685 43.478 0.00 0.00 39.12 2.40
1245 1274 4.380973 GGCAGTAAGGAAAGGAAGATTTGC 60.381 45.833 0.00 0.00 0.00 3.68
1258 1287 1.053424 AGAACAACCGGCAGTAAGGA 58.947 50.000 0.00 0.00 0.00 3.36
1261 1290 1.944024 CACAAGAACAACCGGCAGTAA 59.056 47.619 0.00 0.00 0.00 2.24
1262 1291 1.588674 CACAAGAACAACCGGCAGTA 58.411 50.000 0.00 0.00 0.00 2.74
1263 1292 1.724582 GCACAAGAACAACCGGCAGT 61.725 55.000 0.00 0.00 0.00 4.40
1264 1293 1.008538 GCACAAGAACAACCGGCAG 60.009 57.895 0.00 0.00 0.00 4.85
1265 1294 2.485795 GGCACAAGAACAACCGGCA 61.486 57.895 0.00 0.00 0.00 5.69
1268 1297 0.110238 CATCGGCACAAGAACAACCG 60.110 55.000 0.00 0.00 45.15 4.44
1287 1316 6.586868 TGCATTTGAACAAACAAGATCAAC 57.413 33.333 2.03 0.00 31.26 3.18
1290 1319 8.080083 AGATTTGCATTTGAACAAACAAGATC 57.920 30.769 2.03 8.69 38.50 2.75
1295 1324 7.846644 AGAAAGATTTGCATTTGAACAAACA 57.153 28.000 2.03 0.00 38.50 2.83
1304 1333 3.758300 CGCGGTAGAAAGATTTGCATTT 58.242 40.909 0.00 0.00 0.00 2.32
1306 1335 1.064060 GCGCGGTAGAAAGATTTGCAT 59.936 47.619 8.83 0.00 0.00 3.96
1309 1338 0.996462 TCGCGCGGTAGAAAGATTTG 59.004 50.000 31.69 0.00 0.00 2.32
1310 1339 0.997196 GTCGCGCGGTAGAAAGATTT 59.003 50.000 31.69 0.00 0.00 2.17
1312 1341 1.226888 GGTCGCGCGGTAGAAAGAT 60.227 57.895 31.69 0.00 0.00 2.40
1313 1342 2.180017 GGTCGCGCGGTAGAAAGA 59.820 61.111 31.69 4.34 0.00 2.52
1315 1344 2.180017 GAGGTCGCGCGGTAGAAA 59.820 61.111 31.69 6.17 0.00 2.52
1329 1358 2.348998 GTGCTGGGTCTGGTGAGG 59.651 66.667 0.00 0.00 0.00 3.86
1330 1359 2.047844 CGTGCTGGGTCTGGTGAG 60.048 66.667 0.00 0.00 0.00 3.51
1408 1446 2.493675 GAGACTGCCTGTGATGACTGTA 59.506 50.000 0.00 0.00 0.00 2.74
1411 1449 0.529833 CGAGACTGCCTGTGATGACT 59.470 55.000 0.00 0.00 0.00 3.41
1412 1450 1.080995 GCGAGACTGCCTGTGATGAC 61.081 60.000 0.00 0.00 0.00 3.06
1419 1467 0.875040 CAGCATAGCGAGACTGCCTG 60.875 60.000 0.00 0.00 36.56 4.85
1429 1477 1.667212 TCAATGTTGAGCAGCATAGCG 59.333 47.619 0.00 0.00 40.15 4.26
1433 1481 2.089980 GGAGTCAATGTTGAGCAGCAT 58.910 47.619 0.00 0.00 37.98 3.79
1435 1483 1.527034 TGGAGTCAATGTTGAGCAGC 58.473 50.000 0.00 0.00 37.98 5.25
1450 1510 1.696063 CTTGGGGGCATACATTGGAG 58.304 55.000 0.00 0.00 0.00 3.86
1453 1513 0.748450 CAGCTTGGGGGCATACATTG 59.252 55.000 0.00 0.00 34.17 2.82
1464 1524 3.429141 CGCAGACAGCAGCTTGGG 61.429 66.667 0.00 0.00 46.13 4.12
1465 1525 2.667536 ACGCAGACAGCAGCTTGG 60.668 61.111 0.00 0.00 46.13 3.61
1466 1526 2.554775 CACGCAGACAGCAGCTTG 59.445 61.111 0.00 0.00 46.13 4.01
1467 1527 3.352222 GCACGCAGACAGCAGCTT 61.352 61.111 0.00 0.00 46.13 3.74
1468 1528 4.614112 TGCACGCAGACAGCAGCT 62.614 61.111 0.00 0.00 46.13 4.24
1477 1553 4.099170 GCCTTGAGCTGCACGCAG 62.099 66.667 14.73 14.73 46.15 5.18
1584 1660 2.278857 CGGCAGGATCGAAGACCG 60.279 66.667 0.00 0.00 42.51 4.79
1621 1697 0.647410 CTTGCCGTTGTAGATGAGCG 59.353 55.000 0.00 0.00 0.00 5.03
1657 1733 2.181445 GACCTTCCCTTCGGTGACCC 62.181 65.000 0.00 0.00 32.62 4.46
1659 1735 1.080025 CGACCTTCCCTTCGGTGAC 60.080 63.158 0.00 0.00 32.62 3.67
1686 1762 1.874872 CGTAAAAGCAAACTCCCCGAA 59.125 47.619 0.00 0.00 0.00 4.30
1727 1803 1.553654 CTTCTTCGCCGTAATCGCG 59.446 57.895 0.00 0.00 37.70 5.87
1730 1806 2.308344 GGCCTTCTTCGCCGTAATC 58.692 57.895 0.00 0.00 36.47 1.75
1739 1815 0.955919 CTTGACCACCGGCCTTCTTC 60.956 60.000 0.00 0.00 0.00 2.87
1740 1816 1.073199 CTTGACCACCGGCCTTCTT 59.927 57.895 0.00 0.00 0.00 2.52
1741 1817 2.750350 CTTGACCACCGGCCTTCT 59.250 61.111 0.00 0.00 0.00 2.85
1751 1827 0.104144 TCCTCCCCTTTCCTTGACCA 60.104 55.000 0.00 0.00 0.00 4.02
1768 1844 2.289506 ACCTTTCACGCTTCCTACTTCC 60.290 50.000 0.00 0.00 0.00 3.46
1773 1849 1.337823 GCTCACCTTTCACGCTTCCTA 60.338 52.381 0.00 0.00 0.00 2.94
1776 1852 1.493311 CGCTCACCTTTCACGCTTC 59.507 57.895 0.00 0.00 0.00 3.86
1793 1886 3.242739 GCACAACATAGTAATGGCTTCCG 60.243 47.826 0.00 0.00 37.43 4.30
1794 1887 3.242739 CGCACAACATAGTAATGGCTTCC 60.243 47.826 0.00 0.00 37.43 3.46
1795 1888 3.242739 CCGCACAACATAGTAATGGCTTC 60.243 47.826 0.00 0.00 37.43 3.86
1805 2312 2.529151 GAAATTGCCCGCACAACATAG 58.471 47.619 0.00 0.00 31.03 2.23
1814 2321 1.748493 TGTAGATTGGAAATTGCCCGC 59.252 47.619 0.00 0.00 0.00 6.13
1815 2322 4.654091 AATGTAGATTGGAAATTGCCCG 57.346 40.909 0.00 0.00 0.00 6.13
1844 2351 4.080129 AGCACAATCTACCAAGACATCCAT 60.080 41.667 0.00 0.00 33.57 3.41
1865 2372 8.494016 AAGAATACAGTTTGGAATGTACTAGC 57.506 34.615 0.00 0.00 34.88 3.42
1943 2535 4.078537 TGTGATGTACCCAACCAATCTTG 58.921 43.478 0.00 0.00 0.00 3.02
1964 2556 8.680903 AGTAAGAATTCAGATTGCCATAACTTG 58.319 33.333 8.44 0.00 0.00 3.16
1987 2579 5.989777 GGCTACAGTGAAGAAAAACAGAGTA 59.010 40.000 0.00 0.00 0.00 2.59
2018 2640 5.916883 CAGAGTTTGAAATTGTGCTACAAGG 59.083 40.000 7.58 0.00 41.94 3.61
2037 2659 4.422073 TTAATTCGATCATGCCCAGAGT 57.578 40.909 0.00 0.00 0.00 3.24
2074 2696 9.856488 TCTATACAAGCAACTCTACAACTTTAG 57.144 33.333 0.00 0.00 0.00 1.85
2190 2913 6.228995 AGGTACAGCTCCTTAAAACACTTAC 58.771 40.000 0.00 0.00 30.18 2.34
2220 2943 3.799420 GCGCTAGAACCTCAGATTTACAG 59.201 47.826 0.00 0.00 0.00 2.74
2222 2945 3.124560 GGCGCTAGAACCTCAGATTTAC 58.875 50.000 7.64 0.00 0.00 2.01
2226 2949 1.736586 CGGCGCTAGAACCTCAGAT 59.263 57.895 7.64 0.00 0.00 2.90
2230 2953 2.886124 GTGCGGCGCTAGAACCTC 60.886 66.667 33.26 8.95 0.00 3.85
2263 2986 2.309613 TGTGACAAAGATTTGCTGGCT 58.690 42.857 5.23 0.00 41.79 4.75
2323 3057 9.238368 CAACCCCAATAAGAGAAGTAAAATACA 57.762 33.333 0.00 0.00 0.00 2.29
2324 3058 8.683615 CCAACCCCAATAAGAGAAGTAAAATAC 58.316 37.037 0.00 0.00 0.00 1.89
2377 3111 6.813649 TGTAGCTCACTATTCACAACTCAATC 59.186 38.462 0.00 0.00 0.00 2.67
2428 3172 3.866066 GCTTGGCTCAGATTGTGTCTACA 60.866 47.826 0.00 0.00 34.69 2.74
2429 3173 2.675348 GCTTGGCTCAGATTGTGTCTAC 59.325 50.000 0.00 0.00 34.69 2.59
2433 3191 0.403271 AGGCTTGGCTCAGATTGTGT 59.597 50.000 0.00 0.00 0.00 3.72
2460 3218 3.134623 AGATAAGATGTCATGGCACGGAA 59.865 43.478 0.00 0.00 0.00 4.30
2468 3226 9.551734 TCATTCTAACCAAGATAAGATGTCATG 57.448 33.333 0.00 0.00 33.05 3.07
2524 3286 7.823799 TCATAAGCATCAACAACAATCTCACTA 59.176 33.333 0.00 0.00 0.00 2.74
2539 3301 8.605746 GCTTTTGCATTTATTTCATAAGCATCA 58.394 29.630 10.26 0.00 46.58 3.07
2580 3345 3.616956 TTGCAACCATGGTGAAAACAA 57.383 38.095 20.60 15.08 0.00 2.83
2590 3355 5.286438 CCATGTATGATCTTTGCAACCATG 58.714 41.667 0.00 2.18 32.11 3.66
2608 3373 1.077265 CACCCAGAAAGCCCCATGT 59.923 57.895 0.00 0.00 0.00 3.21
2671 3455 5.447624 AAACCCACCTGAAAAGTTTATCG 57.552 39.130 0.00 0.00 0.00 2.92
2672 3456 7.231925 TCCTTAAACCCACCTGAAAAGTTTATC 59.768 37.037 0.00 0.00 34.05 1.75
2675 3459 5.274015 TCCTTAAACCCACCTGAAAAGTTT 58.726 37.500 0.00 0.00 35.08 2.66
2716 3514 1.405105 TCAAGTGCTTGTGCTTCAACC 59.595 47.619 11.17 0.00 41.16 3.77
2788 3591 7.434492 CAGAGTAAACAGAGTCCAAAGTAAGA 58.566 38.462 0.00 0.00 0.00 2.10
2789 3592 6.146347 GCAGAGTAAACAGAGTCCAAAGTAAG 59.854 42.308 0.00 0.00 0.00 2.34
2790 3593 5.989777 GCAGAGTAAACAGAGTCCAAAGTAA 59.010 40.000 0.00 0.00 0.00 2.24
2791 3594 5.304614 AGCAGAGTAAACAGAGTCCAAAGTA 59.695 40.000 0.00 0.00 0.00 2.24
2793 3596 4.636249 AGCAGAGTAAACAGAGTCCAAAG 58.364 43.478 0.00 0.00 0.00 2.77
2834 3672 7.625828 TCAGTGAATAGAAGATGTACTCGAA 57.374 36.000 0.00 0.00 0.00 3.71
2836 3674 6.416455 GCTTCAGTGAATAGAAGATGTACTCG 59.584 42.308 5.91 0.00 42.95 4.18
2844 3685 4.637534 GCAATGGCTTCAGTGAATAGAAGA 59.362 41.667 5.91 0.00 42.95 2.87
2926 4102 6.672147 AGCAAAACTTACAATCATCACTCAC 58.328 36.000 0.00 0.00 0.00 3.51
3075 4271 6.606234 GGCTAAGCCTGTTAATAAAGACTC 57.394 41.667 0.00 0.00 46.69 3.36
3091 4287 3.298686 ACATTCTTAAGGGGGCTAAGC 57.701 47.619 1.85 0.00 0.00 3.09
3092 4288 5.998363 GTGATACATTCTTAAGGGGGCTAAG 59.002 44.000 1.85 0.00 0.00 2.18
3136 4334 0.108992 GAGGACACATGTCGCCGTTA 60.109 55.000 0.00 0.00 45.65 3.18
3183 4381 9.701355 CATCAGTTAACCAAACAAATCAAAAAC 57.299 29.630 0.88 0.00 40.83 2.43
3184 4382 9.658799 TCATCAGTTAACCAAACAAATCAAAAA 57.341 25.926 0.88 0.00 40.83 1.94
3185 4383 9.311916 CTCATCAGTTAACCAAACAAATCAAAA 57.688 29.630 0.88 0.00 40.83 2.44
3186 4384 8.690884 TCTCATCAGTTAACCAAACAAATCAAA 58.309 29.630 0.88 0.00 40.83 2.69
3187 4385 8.231692 TCTCATCAGTTAACCAAACAAATCAA 57.768 30.769 0.88 0.00 40.83 2.57
3188 4386 7.815840 TCTCATCAGTTAACCAAACAAATCA 57.184 32.000 0.88 0.00 40.83 2.57
3189 4387 8.567948 TCTTCTCATCAGTTAACCAAACAAATC 58.432 33.333 0.88 0.00 40.83 2.17
3190 4388 8.352942 GTCTTCTCATCAGTTAACCAAACAAAT 58.647 33.333 0.88 0.00 40.83 2.32
3191 4389 7.338196 TGTCTTCTCATCAGTTAACCAAACAAA 59.662 33.333 0.88 0.00 40.83 2.83
3192 4390 6.826231 TGTCTTCTCATCAGTTAACCAAACAA 59.174 34.615 0.88 0.00 40.83 2.83
3193 4391 6.260050 GTGTCTTCTCATCAGTTAACCAAACA 59.740 38.462 0.88 0.00 40.83 2.83
3194 4392 6.483640 AGTGTCTTCTCATCAGTTAACCAAAC 59.516 38.462 0.88 0.00 38.46 2.93
3195 4393 6.483307 CAGTGTCTTCTCATCAGTTAACCAAA 59.517 38.462 0.88 0.00 0.00 3.28
3196 4394 5.991606 CAGTGTCTTCTCATCAGTTAACCAA 59.008 40.000 0.88 0.00 0.00 3.67
3197 4395 5.511373 CCAGTGTCTTCTCATCAGTTAACCA 60.511 44.000 0.88 0.00 0.00 3.67
3198 4396 4.932200 CCAGTGTCTTCTCATCAGTTAACC 59.068 45.833 0.88 0.00 0.00 2.85
3199 4397 4.390297 GCCAGTGTCTTCTCATCAGTTAAC 59.610 45.833 0.00 0.00 0.00 2.01
3200 4398 4.563580 GGCCAGTGTCTTCTCATCAGTTAA 60.564 45.833 0.00 0.00 0.00 2.01
3201 4399 3.055819 GGCCAGTGTCTTCTCATCAGTTA 60.056 47.826 0.00 0.00 0.00 2.24
3202 4400 2.289945 GGCCAGTGTCTTCTCATCAGTT 60.290 50.000 0.00 0.00 0.00 3.16
3203 4401 1.277557 GGCCAGTGTCTTCTCATCAGT 59.722 52.381 0.00 0.00 0.00 3.41
3204 4402 1.554160 AGGCCAGTGTCTTCTCATCAG 59.446 52.381 5.01 0.00 0.00 2.90
3205 4403 1.649321 AGGCCAGTGTCTTCTCATCA 58.351 50.000 5.01 0.00 0.00 3.07
3206 4404 2.777832 AAGGCCAGTGTCTTCTCATC 57.222 50.000 5.01 0.00 27.45 2.92
3207 4405 3.515602 AAAAGGCCAGTGTCTTCTCAT 57.484 42.857 5.01 0.00 34.67 2.90
3208 4406 4.134563 GTTAAAAGGCCAGTGTCTTCTCA 58.865 43.478 5.01 0.00 34.67 3.27
3209 4407 4.390264 AGTTAAAAGGCCAGTGTCTTCTC 58.610 43.478 5.01 0.00 34.67 2.87
3210 4408 4.439253 AGTTAAAAGGCCAGTGTCTTCT 57.561 40.909 5.01 0.00 34.67 2.85
3211 4409 4.338400 ACAAGTTAAAAGGCCAGTGTCTTC 59.662 41.667 5.01 0.00 34.67 2.87
3212 4410 4.278310 ACAAGTTAAAAGGCCAGTGTCTT 58.722 39.130 5.01 0.00 38.29 3.01
3213 4411 3.898482 ACAAGTTAAAAGGCCAGTGTCT 58.102 40.909 5.01 0.00 0.00 3.41
3214 4412 4.097286 TGAACAAGTTAAAAGGCCAGTGTC 59.903 41.667 5.01 0.00 0.00 3.67
3215 4413 4.020543 TGAACAAGTTAAAAGGCCAGTGT 58.979 39.130 5.01 0.00 0.00 3.55
3216 4414 4.647424 TGAACAAGTTAAAAGGCCAGTG 57.353 40.909 5.01 0.00 0.00 3.66
3217 4415 4.953579 TCTTGAACAAGTTAAAAGGCCAGT 59.046 37.500 5.01 0.00 39.38 4.00
3218 4416 5.514274 TCTTGAACAAGTTAAAAGGCCAG 57.486 39.130 5.01 0.00 39.38 4.85
3219 4417 6.775629 AGTATCTTGAACAAGTTAAAAGGCCA 59.224 34.615 5.01 0.00 39.38 5.36
3220 4418 7.215719 AGTATCTTGAACAAGTTAAAAGGCC 57.784 36.000 13.15 0.00 39.38 5.19
3221 4419 9.529325 AAAAGTATCTTGAACAAGTTAAAAGGC 57.471 29.630 13.15 0.36 39.38 4.35
3228 4426 9.573133 CAGTTGAAAAAGTATCTTGAACAAGTT 57.427 29.630 13.15 8.47 39.38 2.66
3229 4427 8.739972 ACAGTTGAAAAAGTATCTTGAACAAGT 58.260 29.630 13.15 5.12 39.38 3.16
3230 4428 9.013490 CACAGTTGAAAAAGTATCTTGAACAAG 57.987 33.333 8.09 8.09 39.71 3.16
3231 4429 7.973388 CCACAGTTGAAAAAGTATCTTGAACAA 59.027 33.333 0.00 0.00 0.00 2.83
3232 4430 7.479980 CCACAGTTGAAAAAGTATCTTGAACA 58.520 34.615 0.00 0.00 0.00 3.18
3233 4431 6.417930 GCCACAGTTGAAAAAGTATCTTGAAC 59.582 38.462 0.00 0.00 0.00 3.18
3234 4432 6.321181 AGCCACAGTTGAAAAAGTATCTTGAA 59.679 34.615 0.00 0.00 0.00 2.69
3235 4433 5.827797 AGCCACAGTTGAAAAAGTATCTTGA 59.172 36.000 0.00 0.00 0.00 3.02
3236 4434 6.076981 AGCCACAGTTGAAAAAGTATCTTG 57.923 37.500 0.00 0.00 0.00 3.02
3237 4435 6.715347 AAGCCACAGTTGAAAAAGTATCTT 57.285 33.333 0.00 0.00 0.00 2.40
3238 4436 6.715347 AAAGCCACAGTTGAAAAAGTATCT 57.285 33.333 0.00 0.00 0.00 1.98
3239 4437 8.515414 AGATAAAGCCACAGTTGAAAAAGTATC 58.485 33.333 0.00 0.00 0.00 2.24
3240 4438 8.299570 CAGATAAAGCCACAGTTGAAAAAGTAT 58.700 33.333 0.00 0.00 0.00 2.12
3241 4439 7.648142 CAGATAAAGCCACAGTTGAAAAAGTA 58.352 34.615 0.00 0.00 0.00 2.24
3242 4440 6.507023 CAGATAAAGCCACAGTTGAAAAAGT 58.493 36.000 0.00 0.00 0.00 2.66
3243 4441 5.403466 GCAGATAAAGCCACAGTTGAAAAAG 59.597 40.000 0.00 0.00 0.00 2.27
3244 4442 5.068987 AGCAGATAAAGCCACAGTTGAAAAA 59.931 36.000 0.00 0.00 0.00 1.94
3245 4443 4.584325 AGCAGATAAAGCCACAGTTGAAAA 59.416 37.500 0.00 0.00 0.00 2.29
3246 4444 4.022935 CAGCAGATAAAGCCACAGTTGAAA 60.023 41.667 0.00 0.00 0.00 2.69
3247 4445 3.503363 CAGCAGATAAAGCCACAGTTGAA 59.497 43.478 0.00 0.00 0.00 2.69
3248 4446 3.076621 CAGCAGATAAAGCCACAGTTGA 58.923 45.455 0.00 0.00 0.00 3.18
3249 4447 2.163010 CCAGCAGATAAAGCCACAGTTG 59.837 50.000 0.00 0.00 0.00 3.16
3250 4448 2.440409 CCAGCAGATAAAGCCACAGTT 58.560 47.619 0.00 0.00 0.00 3.16
3251 4449 1.340405 CCCAGCAGATAAAGCCACAGT 60.340 52.381 0.00 0.00 0.00 3.55
3252 4450 1.065199 TCCCAGCAGATAAAGCCACAG 60.065 52.381 0.00 0.00 0.00 3.66
3253 4451 0.991146 TCCCAGCAGATAAAGCCACA 59.009 50.000 0.00 0.00 0.00 4.17
3254 4452 2.355010 ATCCCAGCAGATAAAGCCAC 57.645 50.000 0.00 0.00 0.00 5.01
3255 4453 3.048600 AGTATCCCAGCAGATAAAGCCA 58.951 45.455 0.00 0.00 30.66 4.75
3256 4454 3.181450 ACAGTATCCCAGCAGATAAAGCC 60.181 47.826 0.00 0.00 30.66 4.35
3257 4455 3.812053 CACAGTATCCCAGCAGATAAAGC 59.188 47.826 0.00 0.00 30.66 3.51
3258 4456 4.384056 CCACAGTATCCCAGCAGATAAAG 58.616 47.826 0.00 0.00 30.66 1.85
3259 4457 3.433598 GCCACAGTATCCCAGCAGATAAA 60.434 47.826 0.00 0.00 30.66 1.40
3260 4458 2.104792 GCCACAGTATCCCAGCAGATAA 59.895 50.000 0.00 0.00 30.66 1.75
3261 4459 1.694150 GCCACAGTATCCCAGCAGATA 59.306 52.381 0.00 0.00 0.00 1.98
3262 4460 0.471617 GCCACAGTATCCCAGCAGAT 59.528 55.000 0.00 0.00 0.00 2.90
3263 4461 0.909133 TGCCACAGTATCCCAGCAGA 60.909 55.000 0.00 0.00 0.00 4.26
3264 4462 0.463295 CTGCCACAGTATCCCAGCAG 60.463 60.000 0.00 0.00 41.43 4.24
3265 4463 1.200760 ACTGCCACAGTATCCCAGCA 61.201 55.000 0.00 0.00 43.46 4.41
3266 4464 0.745845 CACTGCCACAGTATCCCAGC 60.746 60.000 0.00 0.00 43.43 4.85
3267 4465 0.745845 GCACTGCCACAGTATCCCAG 60.746 60.000 0.00 0.00 43.43 4.45
3268 4466 1.200760 AGCACTGCCACAGTATCCCA 61.201 55.000 0.00 0.00 43.43 4.37
3269 4467 0.745845 CAGCACTGCCACAGTATCCC 60.746 60.000 0.00 0.00 43.43 3.85
3270 4468 0.745845 CCAGCACTGCCACAGTATCC 60.746 60.000 0.00 0.00 43.43 2.59
3271 4469 1.372087 GCCAGCACTGCCACAGTATC 61.372 60.000 0.00 0.00 43.43 2.24
3272 4470 1.377725 GCCAGCACTGCCACAGTAT 60.378 57.895 0.00 0.00 43.43 2.12
3273 4471 1.191489 TAGCCAGCACTGCCACAGTA 61.191 55.000 0.00 0.00 43.43 2.74
3274 4472 1.845627 ATAGCCAGCACTGCCACAGT 61.846 55.000 0.00 0.00 46.51 3.55
3275 4473 0.178767 TATAGCCAGCACTGCCACAG 59.821 55.000 0.00 0.00 37.52 3.66
3276 4474 0.617935 TTATAGCCAGCACTGCCACA 59.382 50.000 0.00 0.00 0.00 4.17
3277 4475 1.017387 GTTATAGCCAGCACTGCCAC 58.983 55.000 0.00 0.00 0.00 5.01
3278 4476 0.911769 AGTTATAGCCAGCACTGCCA 59.088 50.000 0.00 0.00 0.00 4.92
3279 4477 1.672881 CAAGTTATAGCCAGCACTGCC 59.327 52.381 0.00 0.00 0.00 4.85
3280 4478 2.352960 GACAAGTTATAGCCAGCACTGC 59.647 50.000 0.00 0.00 0.00 4.40
3281 4479 3.620374 CAGACAAGTTATAGCCAGCACTG 59.380 47.826 0.00 0.00 0.00 3.66
3282 4480 3.515502 TCAGACAAGTTATAGCCAGCACT 59.484 43.478 0.00 0.00 0.00 4.40
3283 4481 3.861840 TCAGACAAGTTATAGCCAGCAC 58.138 45.455 0.00 0.00 0.00 4.40
3284 4482 3.769300 TCTCAGACAAGTTATAGCCAGCA 59.231 43.478 0.00 0.00 0.00 4.41
3285 4483 4.392921 TCTCAGACAAGTTATAGCCAGC 57.607 45.455 0.00 0.00 0.00 4.85
3286 4484 6.402222 AGTTTCTCAGACAAGTTATAGCCAG 58.598 40.000 0.00 0.00 0.00 4.85
3287 4485 6.360370 AGTTTCTCAGACAAGTTATAGCCA 57.640 37.500 0.00 0.00 0.00 4.75
3288 4486 7.148390 GGAAAGTTTCTCAGACAAGTTATAGCC 60.148 40.741 15.05 0.00 0.00 3.93
3289 4487 7.387948 TGGAAAGTTTCTCAGACAAGTTATAGC 59.612 37.037 15.05 0.00 0.00 2.97
3290 4488 8.833231 TGGAAAGTTTCTCAGACAAGTTATAG 57.167 34.615 15.05 0.00 0.00 1.31
3291 4489 7.387948 GCTGGAAAGTTTCTCAGACAAGTTATA 59.612 37.037 25.70 0.00 32.90 0.98
3292 4490 6.205658 GCTGGAAAGTTTCTCAGACAAGTTAT 59.794 38.462 25.70 0.00 32.90 1.89
3293 4491 5.527582 GCTGGAAAGTTTCTCAGACAAGTTA 59.472 40.000 25.70 0.00 32.90 2.24
3294 4492 4.336713 GCTGGAAAGTTTCTCAGACAAGTT 59.663 41.667 25.70 0.00 32.90 2.66
3295 4493 3.879892 GCTGGAAAGTTTCTCAGACAAGT 59.120 43.478 25.70 0.00 32.90 3.16
3296 4494 3.879295 TGCTGGAAAGTTTCTCAGACAAG 59.121 43.478 25.70 11.57 32.90 3.16
3297 4495 3.627577 GTGCTGGAAAGTTTCTCAGACAA 59.372 43.478 25.70 14.18 32.90 3.18
3298 4496 3.118261 AGTGCTGGAAAGTTTCTCAGACA 60.118 43.478 25.70 21.00 32.90 3.41
3299 4497 3.471680 AGTGCTGGAAAGTTTCTCAGAC 58.528 45.455 25.70 20.92 32.90 3.51
3300 4498 3.389329 AGAGTGCTGGAAAGTTTCTCAGA 59.611 43.478 25.70 14.59 32.90 3.27
3301 4499 3.497640 CAGAGTGCTGGAAAGTTTCTCAG 59.502 47.826 20.83 20.83 38.51 3.35
3302 4500 3.470709 CAGAGTGCTGGAAAGTTTCTCA 58.529 45.455 15.05 10.29 38.51 3.27
3303 4501 2.225255 GCAGAGTGCTGGAAAGTTTCTC 59.775 50.000 15.05 6.39 42.53 2.87
3304 4502 2.225467 GCAGAGTGCTGGAAAGTTTCT 58.775 47.619 15.05 0.00 42.53 2.52
3305 4503 1.949525 TGCAGAGTGCTGGAAAGTTTC 59.050 47.619 7.09 7.09 45.31 2.78
3306 4504 1.952296 CTGCAGAGTGCTGGAAAGTTT 59.048 47.619 8.42 0.00 45.31 2.66
3307 4505 1.602311 CTGCAGAGTGCTGGAAAGTT 58.398 50.000 8.42 0.00 45.31 2.66
3308 4506 0.888285 GCTGCAGAGTGCTGGAAAGT 60.888 55.000 20.43 0.00 45.31 2.66
3309 4507 0.605860 AGCTGCAGAGTGCTGGAAAG 60.606 55.000 20.43 0.00 45.31 2.62
3310 4508 0.179009 AAGCTGCAGAGTGCTGGAAA 60.179 50.000 20.43 0.00 45.31 3.13
3311 4509 0.887836 CAAGCTGCAGAGTGCTGGAA 60.888 55.000 20.43 0.00 45.31 3.53
3312 4510 1.302271 CAAGCTGCAGAGTGCTGGA 60.302 57.895 20.43 0.00 45.31 3.86
3313 4511 2.333417 CCAAGCTGCAGAGTGCTGG 61.333 63.158 20.43 11.41 45.31 4.85
3314 4512 2.333417 CCCAAGCTGCAGAGTGCTG 61.333 63.158 20.43 5.95 45.31 4.41
3315 4513 2.033757 CCCAAGCTGCAGAGTGCT 59.966 61.111 20.43 4.84 45.31 4.40
3316 4514 2.282040 ACCCAAGCTGCAGAGTGC 60.282 61.111 20.43 1.85 45.29 4.40
3317 4515 0.820891 AACACCCAAGCTGCAGAGTG 60.821 55.000 20.43 17.11 0.00 3.51
3318 4516 0.820891 CAACACCCAAGCTGCAGAGT 60.821 55.000 20.43 0.00 0.00 3.24
3319 4517 0.820891 ACAACACCCAAGCTGCAGAG 60.821 55.000 20.43 6.06 0.00 3.35
3320 4518 1.102809 CACAACACCCAAGCTGCAGA 61.103 55.000 20.43 0.00 0.00 4.26
3321 4519 1.361271 CACAACACCCAAGCTGCAG 59.639 57.895 10.11 10.11 0.00 4.41
3322 4520 2.126596 CCACAACACCCAAGCTGCA 61.127 57.895 1.02 0.00 0.00 4.41
3323 4521 1.181098 ATCCACAACACCCAAGCTGC 61.181 55.000 0.00 0.00 0.00 5.25
3324 4522 1.331214 AATCCACAACACCCAAGCTG 58.669 50.000 0.00 0.00 0.00 4.24
3325 4523 2.086610 AAATCCACAACACCCAAGCT 57.913 45.000 0.00 0.00 0.00 3.74
3326 4524 2.365293 AGAAAATCCACAACACCCAAGC 59.635 45.455 0.00 0.00 0.00 4.01
3327 4525 4.370917 CAAGAAAATCCACAACACCCAAG 58.629 43.478 0.00 0.00 0.00 3.61
3328 4526 3.133721 CCAAGAAAATCCACAACACCCAA 59.866 43.478 0.00 0.00 0.00 4.12
3329 4527 2.697751 CCAAGAAAATCCACAACACCCA 59.302 45.455 0.00 0.00 0.00 4.51
3330 4528 2.962421 TCCAAGAAAATCCACAACACCC 59.038 45.455 0.00 0.00 0.00 4.61
3331 4529 4.280677 TCATCCAAGAAAATCCACAACACC 59.719 41.667 0.00 0.00 0.00 4.16
3332 4530 5.452078 TCATCCAAGAAAATCCACAACAC 57.548 39.130 0.00 0.00 0.00 3.32
3333 4531 6.377996 CCTATCATCCAAGAAAATCCACAACA 59.622 38.462 0.00 0.00 0.00 3.33
3334 4532 6.681368 GCCTATCATCCAAGAAAATCCACAAC 60.681 42.308 0.00 0.00 0.00 3.32
3335 4533 5.360714 GCCTATCATCCAAGAAAATCCACAA 59.639 40.000 0.00 0.00 0.00 3.33
3336 4534 4.889409 GCCTATCATCCAAGAAAATCCACA 59.111 41.667 0.00 0.00 0.00 4.17
3337 4535 4.279420 GGCCTATCATCCAAGAAAATCCAC 59.721 45.833 0.00 0.00 0.00 4.02
3338 4536 4.168675 AGGCCTATCATCCAAGAAAATCCA 59.831 41.667 1.29 0.00 0.00 3.41
3339 4537 4.522022 CAGGCCTATCATCCAAGAAAATCC 59.478 45.833 3.98 0.00 0.00 3.01
3340 4538 4.522022 CCAGGCCTATCATCCAAGAAAATC 59.478 45.833 3.98 0.00 0.00 2.17
3341 4539 4.078980 ACCAGGCCTATCATCCAAGAAAAT 60.079 41.667 3.98 0.00 0.00 1.82
3342 4540 3.269381 ACCAGGCCTATCATCCAAGAAAA 59.731 43.478 3.98 0.00 0.00 2.29
3343 4541 2.852449 ACCAGGCCTATCATCCAAGAAA 59.148 45.455 3.98 0.00 0.00 2.52
3344 4542 2.439507 GACCAGGCCTATCATCCAAGAA 59.560 50.000 3.98 0.00 0.00 2.52
3345 4543 2.050144 GACCAGGCCTATCATCCAAGA 58.950 52.381 3.98 0.00 0.00 3.02
3346 4544 1.072965 GGACCAGGCCTATCATCCAAG 59.927 57.143 3.98 0.00 0.00 3.61
3347 4545 1.140312 GGACCAGGCCTATCATCCAA 58.860 55.000 3.98 0.00 0.00 3.53
3348 4546 0.268869 AGGACCAGGCCTATCATCCA 59.731 55.000 20.27 0.00 36.22 3.41
3349 4547 1.072965 CAAGGACCAGGCCTATCATCC 59.927 57.143 3.98 10.39 37.26 3.51
3350 4548 2.050144 TCAAGGACCAGGCCTATCATC 58.950 52.381 3.98 0.00 37.26 2.92
3351 4549 2.196742 TCAAGGACCAGGCCTATCAT 57.803 50.000 3.98 0.05 37.26 2.45
3352 4550 2.173356 CAATCAAGGACCAGGCCTATCA 59.827 50.000 3.98 0.00 37.26 2.15
3353 4551 2.173569 ACAATCAAGGACCAGGCCTATC 59.826 50.000 3.98 6.25 37.26 2.08
3354 4552 2.208872 ACAATCAAGGACCAGGCCTAT 58.791 47.619 3.98 0.00 37.26 2.57
3355 4553 1.668826 ACAATCAAGGACCAGGCCTA 58.331 50.000 3.98 0.00 37.26 3.93
3383 4581 4.235079 AGCAATAACAGCCATTCCACTA 57.765 40.909 0.00 0.00 0.00 2.74
3426 4624 0.039074 CGACCAAGAACAGAGCGACT 60.039 55.000 0.00 0.00 0.00 4.18
3436 4634 1.000607 CCGACACTTCTCGACCAAGAA 60.001 52.381 6.40 0.00 35.58 2.52
3473 4671 1.378646 AGAGATGCCCGACTCGACA 60.379 57.895 0.00 0.00 38.08 4.35
3483 4681 2.036992 AGGATGTCGATTCAGAGATGCC 59.963 50.000 0.00 0.00 33.75 4.40
3497 4695 1.373497 CATCGCGGCCTAGGATGTC 60.373 63.158 14.75 0.00 34.33 3.06
3511 4709 3.069300 ACCAGATCAAGATCAGACCATCG 59.931 47.826 12.21 0.00 40.22 3.84
3653 4851 8.922676 GTCTGAGTCGTTCATAAAGAAAATGTA 58.077 33.333 0.00 0.00 38.13 2.29
3671 4869 3.084039 TGGCAAAATCCATGTCTGAGTC 58.916 45.455 0.00 0.00 0.00 3.36
3717 4916 7.420002 GTTGATTTAGCTTCATATGCACATGA 58.580 34.615 2.84 2.84 33.10 3.07
3720 4919 5.887598 AGGTTGATTTAGCTTCATATGCACA 59.112 36.000 0.00 0.00 0.00 4.57
3769 4968 7.221259 GGTAAAATAACTGTGCTCGTTTTGTTT 59.779 33.333 2.38 4.14 0.00 2.83
3773 4972 6.628919 AGGTAAAATAACTGTGCTCGTTTT 57.371 33.333 2.38 0.00 0.00 2.43
3784 4983 6.655848 TCGTGGCATGTTTAGGTAAAATAACT 59.344 34.615 6.60 0.00 0.00 2.24
3792 4991 3.688694 AAGTCGTGGCATGTTTAGGTA 57.311 42.857 6.60 0.00 0.00 3.08
3793 4992 2.552315 CAAAGTCGTGGCATGTTTAGGT 59.448 45.455 6.60 0.00 0.00 3.08
3794 4993 2.668279 GCAAAGTCGTGGCATGTTTAGG 60.668 50.000 6.60 0.00 0.00 2.69
3795 4994 2.031245 TGCAAAGTCGTGGCATGTTTAG 60.031 45.455 6.60 0.00 31.58 1.85
3807 5006 2.388121 CTGCTTTTCCTTGCAAAGTCG 58.612 47.619 0.00 0.00 44.25 4.18
3809 5008 1.202568 GGCTGCTTTTCCTTGCAAAGT 60.203 47.619 0.00 0.00 44.25 2.66
3811 5010 0.829333 TGGCTGCTTTTCCTTGCAAA 59.171 45.000 0.00 0.00 38.81 3.68
3849 5048 4.154556 TGGTTCGAATTAATGTTTCCCGAC 59.845 41.667 0.00 0.00 0.00 4.79
3977 6661 9.994432 CCATCAGTTGTAGATTAAAATTCTGTC 57.006 33.333 0.00 0.00 0.00 3.51
3978 6662 9.520515 ACCATCAGTTGTAGATTAAAATTCTGT 57.479 29.630 0.00 0.00 0.00 3.41
4035 6719 4.881273 TGGTTTGTCGGGATGATTGAATAG 59.119 41.667 0.00 0.00 0.00 1.73
4039 6756 2.869101 TGGTTTGTCGGGATGATTGA 57.131 45.000 0.00 0.00 0.00 2.57
4137 6858 0.528466 GAGATTCGAGGCATGCGTCA 60.528 55.000 32.67 19.23 0.00 4.35
4138 6859 0.249238 AGAGATTCGAGGCATGCGTC 60.249 55.000 26.58 26.58 0.00 5.19
4144 6865 0.173481 CGGTCAAGAGATTCGAGGCA 59.827 55.000 0.00 0.00 0.00 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.