Multiple sequence alignment - TraesCS5B01G048400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G048400 chr5B 100.000 2696 0 0 1 2696 54548426 54551121 0.000000e+00 4979
1 TraesCS5B01G048400 chr5B 88.568 796 61 19 638 1428 54859853 54860623 0.000000e+00 939
2 TraesCS5B01G048400 chr5B 86.171 875 73 32 652 1519 54709897 54710730 0.000000e+00 902
3 TraesCS5B01G048400 chr5B 87.750 751 50 24 703 1421 54508308 54509048 0.000000e+00 839
4 TraesCS5B01G048400 chr5B 81.519 395 33 10 629 987 54845099 54845489 3.400000e-74 289
5 TraesCS5B01G048400 chr5B 91.216 148 12 1 1 147 697442389 697442536 1.640000e-47 200
6 TraesCS5B01G048400 chr5B 92.708 96 6 1 638 732 54839917 54840012 1.300000e-28 137
7 TraesCS5B01G048400 chr5D 92.664 1186 68 14 400 1572 51674617 51675796 0.000000e+00 1690
8 TraesCS5B01G048400 chr5D 90.355 902 65 10 542 1428 51851769 51852663 0.000000e+00 1164
9 TraesCS5B01G048400 chr5D 89.045 785 63 14 638 1420 51860595 51861358 0.000000e+00 952
10 TraesCS5B01G048400 chr5D 86.136 880 73 29 652 1519 51697934 51698776 0.000000e+00 904
11 TraesCS5B01G048400 chr5D 86.430 818 59 25 638 1429 51892562 51893353 0.000000e+00 848
12 TraesCS5B01G048400 chr5D 87.027 740 49 29 696 1421 51637161 51637867 0.000000e+00 791
13 TraesCS5B01G048400 chr5D 86.056 502 39 10 1656 2156 51676261 51676732 6.660000e-141 510
14 TraesCS5B01G048400 chr5D 90.598 351 27 5 1594 1940 51698804 51699152 6.800000e-126 460
15 TraesCS5B01G048400 chr5D 85.714 259 20 2 154 395 51671597 51671855 9.580000e-65 257
16 TraesCS5B01G048400 chr5D 93.814 97 5 1 2157 2252 51676794 51676890 7.780000e-31 145
17 TraesCS5B01G048400 chr5A 93.042 891 49 7 529 1407 40684161 40685050 0.000000e+00 1290
18 TraesCS5B01G048400 chr5A 88.564 787 63 17 638 1420 40934388 40935151 0.000000e+00 929
19 TraesCS5B01G048400 chr5A 88.564 787 63 17 638 1420 40968271 40969034 0.000000e+00 929
20 TraesCS5B01G048400 chr5A 88.564 787 63 17 638 1420 41005153 41005916 0.000000e+00 929
21 TraesCS5B01G048400 chr5A 87.785 745 60 17 696 1421 40628623 40629355 0.000000e+00 843
22 TraesCS5B01G048400 chr5A 85.463 853 69 34 676 1519 40812925 40813731 0.000000e+00 837
23 TraesCS5B01G048400 chr5A 85.425 741 58 30 697 1428 40925041 40925740 0.000000e+00 725
24 TraesCS5B01G048400 chr5A 84.926 272 34 4 1650 1917 40813981 40814249 4.420000e-68 268
25 TraesCS5B01G048400 chr5A 88.889 180 18 1 1656 1835 40687325 40687502 1.260000e-53 220
26 TraesCS5B01G048400 chr5A 87.069 116 6 4 1448 1561 40686755 40686863 3.650000e-24 122
27 TraesCS5B01G048400 chr4B 95.740 446 19 0 2251 2696 536849086 536848641 0.000000e+00 719
28 TraesCS5B01G048400 chr4B 94.631 447 24 0 2250 2696 16068952 16068506 0.000000e+00 693
29 TraesCS5B01G048400 chr7B 94.878 449 21 2 2250 2696 610225658 610225210 0.000000e+00 701
30 TraesCS5B01G048400 chr2B 94.395 446 24 1 2251 2696 172168122 172167678 0.000000e+00 684
31 TraesCS5B01G048400 chr3B 93.973 448 25 2 2251 2696 32728298 32727851 0.000000e+00 676
32 TraesCS5B01G048400 chr1B 93.960 447 26 1 2251 2696 670795988 670796434 0.000000e+00 675
33 TraesCS5B01G048400 chr1B 93.960 447 23 3 2250 2695 119770815 119770372 0.000000e+00 673
34 TraesCS5B01G048400 chr3A 93.946 446 23 3 2251 2695 10266706 10266264 0.000000e+00 671
35 TraesCS5B01G048400 chr7D 93.919 444 26 1 2251 2694 497570700 497570258 0.000000e+00 669
36 TraesCS5B01G048400 chr2A 90.541 148 13 1 1 147 45175852 45175999 7.620000e-46 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G048400 chr5B 54548426 54551121 2695 False 4979.0 4979 100.000000 1 2696 1 chr5B.!!$F2 2695
1 TraesCS5B01G048400 chr5B 54859853 54860623 770 False 939.0 939 88.568000 638 1428 1 chr5B.!!$F6 790
2 TraesCS5B01G048400 chr5B 54709897 54710730 833 False 902.0 902 86.171000 652 1519 1 chr5B.!!$F3 867
3 TraesCS5B01G048400 chr5B 54508308 54509048 740 False 839.0 839 87.750000 703 1421 1 chr5B.!!$F1 718
4 TraesCS5B01G048400 chr5D 51851769 51852663 894 False 1164.0 1164 90.355000 542 1428 1 chr5D.!!$F2 886
5 TraesCS5B01G048400 chr5D 51860595 51861358 763 False 952.0 952 89.045000 638 1420 1 chr5D.!!$F3 782
6 TraesCS5B01G048400 chr5D 51892562 51893353 791 False 848.0 848 86.430000 638 1429 1 chr5D.!!$F4 791
7 TraesCS5B01G048400 chr5D 51637161 51637867 706 False 791.0 791 87.027000 696 1421 1 chr5D.!!$F1 725
8 TraesCS5B01G048400 chr5D 51697934 51699152 1218 False 682.0 904 88.367000 652 1940 2 chr5D.!!$F6 1288
9 TraesCS5B01G048400 chr5D 51671597 51676890 5293 False 650.5 1690 89.562000 154 2252 4 chr5D.!!$F5 2098
10 TraesCS5B01G048400 chr5A 40934388 40935151 763 False 929.0 929 88.564000 638 1420 1 chr5A.!!$F3 782
11 TraesCS5B01G048400 chr5A 40968271 40969034 763 False 929.0 929 88.564000 638 1420 1 chr5A.!!$F4 782
12 TraesCS5B01G048400 chr5A 41005153 41005916 763 False 929.0 929 88.564000 638 1420 1 chr5A.!!$F5 782
13 TraesCS5B01G048400 chr5A 40628623 40629355 732 False 843.0 843 87.785000 696 1421 1 chr5A.!!$F1 725
14 TraesCS5B01G048400 chr5A 40925041 40925740 699 False 725.0 725 85.425000 697 1428 1 chr5A.!!$F2 731
15 TraesCS5B01G048400 chr5A 40812925 40814249 1324 False 552.5 837 85.194500 676 1917 2 chr5A.!!$F7 1241
16 TraesCS5B01G048400 chr5A 40684161 40687502 3341 False 544.0 1290 89.666667 529 1835 3 chr5A.!!$F6 1306

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
43 44 0.034616 GGATCTGGGCGGAAGAGATG 59.965 60.0 0.0 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1708 7224 0.666274 TGCTGACAAGAAGGTACGCG 60.666 55.0 3.53 3.53 0.0 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.195698 GCGCAACCGACCTGGATC 61.196 66.667 0.30 0.00 42.00 3.36
29 30 2.579201 CGCAACCGACCTGGATCT 59.421 61.111 0.00 0.00 42.00 2.75
30 31 1.811266 CGCAACCGACCTGGATCTG 60.811 63.158 0.00 0.00 42.00 2.90
31 32 1.450312 GCAACCGACCTGGATCTGG 60.450 63.158 0.00 0.00 42.00 3.86
32 33 1.221840 CAACCGACCTGGATCTGGG 59.778 63.158 0.00 6.60 42.00 4.45
33 34 2.670148 AACCGACCTGGATCTGGGC 61.670 63.158 0.00 5.82 42.00 5.36
36 37 2.764128 GACCTGGATCTGGGCGGA 60.764 66.667 0.00 0.00 0.00 5.54
37 38 2.285368 ACCTGGATCTGGGCGGAA 60.285 61.111 0.00 0.00 0.00 4.30
38 39 2.317149 GACCTGGATCTGGGCGGAAG 62.317 65.000 0.00 0.00 0.00 3.46
39 40 2.066393 CCTGGATCTGGGCGGAAGA 61.066 63.158 0.00 0.00 0.00 2.87
40 41 1.445095 CTGGATCTGGGCGGAAGAG 59.555 63.158 0.00 0.00 0.00 2.85
41 42 1.001631 TGGATCTGGGCGGAAGAGA 59.998 57.895 0.00 0.00 0.00 3.10
42 43 0.399091 TGGATCTGGGCGGAAGAGAT 60.399 55.000 0.00 0.00 0.00 2.75
43 44 0.034616 GGATCTGGGCGGAAGAGATG 59.965 60.000 0.00 0.00 0.00 2.90
44 45 0.034616 GATCTGGGCGGAAGAGATGG 59.965 60.000 0.00 0.00 0.00 3.51
45 46 0.399091 ATCTGGGCGGAAGAGATGGA 60.399 55.000 0.00 0.00 0.00 3.41
46 47 0.617535 TCTGGGCGGAAGAGATGGAA 60.618 55.000 0.00 0.00 0.00 3.53
47 48 0.471617 CTGGGCGGAAGAGATGGAAT 59.528 55.000 0.00 0.00 0.00 3.01
48 49 0.181114 TGGGCGGAAGAGATGGAATG 59.819 55.000 0.00 0.00 0.00 2.67
49 50 0.536006 GGGCGGAAGAGATGGAATGG 60.536 60.000 0.00 0.00 0.00 3.16
50 51 1.169034 GGCGGAAGAGATGGAATGGC 61.169 60.000 0.00 0.00 0.00 4.40
51 52 0.179034 GCGGAAGAGATGGAATGGCT 60.179 55.000 0.00 0.00 0.00 4.75
52 53 1.590932 CGGAAGAGATGGAATGGCTG 58.409 55.000 0.00 0.00 0.00 4.85
53 54 1.813092 CGGAAGAGATGGAATGGCTGG 60.813 57.143 0.00 0.00 0.00 4.85
54 55 1.316651 GAAGAGATGGAATGGCTGGC 58.683 55.000 0.00 0.00 0.00 4.85
55 56 0.106318 AAGAGATGGAATGGCTGGCC 60.106 55.000 4.43 4.43 0.00 5.36
120 121 2.815211 CACGGCCACCACATCGAG 60.815 66.667 2.24 0.00 0.00 4.04
121 122 4.082523 ACGGCCACCACATCGAGG 62.083 66.667 2.24 0.00 0.00 4.63
123 124 4.101448 GGCCACCACATCGAGGCT 62.101 66.667 10.53 0.00 46.23 4.58
124 125 2.731571 GGCCACCACATCGAGGCTA 61.732 63.158 10.53 0.00 46.23 3.93
125 126 1.227380 GCCACCACATCGAGGCTAG 60.227 63.158 0.00 0.00 43.70 3.42
126 127 1.443407 CCACCACATCGAGGCTAGG 59.557 63.158 0.00 0.00 0.00 3.02
127 128 1.443407 CACCACATCGAGGCTAGGG 59.557 63.158 0.00 0.00 0.00 3.53
128 129 1.043116 CACCACATCGAGGCTAGGGA 61.043 60.000 0.00 0.00 0.00 4.20
129 130 0.325296 ACCACATCGAGGCTAGGGAA 60.325 55.000 0.00 0.00 0.00 3.97
130 131 0.390860 CCACATCGAGGCTAGGGAAG 59.609 60.000 0.00 0.00 0.00 3.46
148 149 2.442643 CAGCCCCGATGCCCAATT 60.443 61.111 0.00 0.00 0.00 2.32
149 150 2.059786 CAGCCCCGATGCCCAATTT 61.060 57.895 0.00 0.00 0.00 1.82
150 151 1.306056 AGCCCCGATGCCCAATTTT 60.306 52.632 0.00 0.00 0.00 1.82
151 152 0.909133 AGCCCCGATGCCCAATTTTT 60.909 50.000 0.00 0.00 0.00 1.94
188 189 5.659463 TGCCTTCAATAATTATGTTGCACC 58.341 37.500 0.00 0.00 0.00 5.01
190 191 6.105333 GCCTTCAATAATTATGTTGCACCAA 58.895 36.000 0.00 0.00 0.00 3.67
237 254 5.513233 AGACCTGCAAATTTAGATCATGGT 58.487 37.500 0.00 0.00 0.00 3.55
238 255 6.662755 AGACCTGCAAATTTAGATCATGGTA 58.337 36.000 0.00 0.00 0.00 3.25
298 316 5.833340 TGTTAATAAACACCCTAAGGGCAT 58.167 37.500 0.00 0.00 40.69 4.40
300 318 6.378848 TGTTAATAAACACCCTAAGGGCATTC 59.621 38.462 0.00 0.00 40.69 2.67
310 328 0.392998 AAGGGCATTCTGTACGCAGG 60.393 55.000 0.00 0.00 42.78 4.85
320 338 1.331756 CTGTACGCAGGAAATGGATGC 59.668 52.381 0.00 0.00 39.01 3.91
321 339 0.663153 GTACGCAGGAAATGGATGCC 59.337 55.000 0.00 0.00 36.60 4.40
322 340 0.254462 TACGCAGGAAATGGATGCCA 59.746 50.000 0.00 0.00 36.60 4.92
351 369 2.359900 CACTCTGGTTTAGCCACATCC 58.640 52.381 0.00 0.00 43.61 3.51
360 378 2.787473 TAGCCACATCCTTTCCACTG 57.213 50.000 0.00 0.00 0.00 3.66
387 405 6.051179 ACTGTTACAAGTATTTCTCCCCTC 57.949 41.667 0.00 0.00 0.00 4.30
395 413 8.252624 ACAAGTATTTCTCCCCTCTCTTATAC 57.747 38.462 0.00 0.00 0.00 1.47
397 415 8.364142 CAAGTATTTCTCCCCTCTCTTATACAG 58.636 40.741 0.00 0.00 0.00 2.74
432 3211 2.736144 TGTAAGACTACACAAGGCGG 57.264 50.000 0.00 0.00 38.81 6.13
433 3212 1.274167 TGTAAGACTACACAAGGCGGG 59.726 52.381 0.00 0.00 38.81 6.13
436 3215 0.320697 AGACTACACAAGGCGGGAAC 59.679 55.000 0.00 0.00 38.81 3.62
462 3241 2.282462 GCTTGGAGGGTGGTGGTG 60.282 66.667 0.00 0.00 0.00 4.17
464 3243 2.776526 TTGGAGGGTGGTGGTGCT 60.777 61.111 0.00 0.00 0.00 4.40
465 3244 2.754664 CTTGGAGGGTGGTGGTGCTC 62.755 65.000 0.00 0.00 0.00 4.26
466 3245 2.930562 GGAGGGTGGTGGTGCTCT 60.931 66.667 0.00 0.00 0.00 4.09
494 3273 2.357154 CCGGGGATCAAACTCCAGATTT 60.357 50.000 0.00 0.00 37.01 2.17
495 3274 3.118038 CCGGGGATCAAACTCCAGATTTA 60.118 47.826 0.00 0.00 37.01 1.40
499 3278 5.590663 GGGGATCAAACTCCAGATTTAACTC 59.409 44.000 0.00 0.00 37.01 3.01
502 3281 7.365652 GGGATCAAACTCCAGATTTAACTCCTA 60.366 40.741 0.00 0.00 37.01 2.94
521 3300 8.779354 ACTCCTATGATAAAAAGCGGAATATC 57.221 34.615 0.00 0.00 0.00 1.63
523 3302 9.219603 CTCCTATGATAAAAAGCGGAATATCAA 57.780 33.333 8.62 1.32 38.04 2.57
604 3391 6.825944 ATACGAGTGTATGTGAGCATCTAT 57.174 37.500 0.00 0.00 39.81 1.98
619 3406 9.967346 GTGAGCATCTATATCTGTACTGTTTTA 57.033 33.333 0.00 0.00 34.92 1.52
672 3461 1.287442 TCTCACCAGCATCTCTCTCCT 59.713 52.381 0.00 0.00 0.00 3.69
687 3476 5.665360 TCTCTCTCCTTGTCTCTCTCATCTA 59.335 44.000 0.00 0.00 0.00 1.98
690 3479 5.821097 TCTCCTTGTCTCTCTCATCTAACA 58.179 41.667 0.00 0.00 0.00 2.41
926 3741 2.672874 TGGTCAAATTGCTCGAAGATCG 59.327 45.455 0.00 0.00 42.10 3.69
948 3767 0.238289 CTGTCGGTGCACATTTCCAC 59.762 55.000 20.43 5.72 0.00 4.02
1016 3849 3.119291 CACAGCTCAAAGCCTCGTATAG 58.881 50.000 0.00 0.00 43.77 1.31
1028 3861 3.504520 GCCTCGTATAGAAGAGCTAGCTT 59.495 47.826 20.42 3.03 33.39 3.74
1057 3896 5.340932 CGATTGTAGCTACTAATTGAGCTCG 59.659 44.000 23.84 15.79 46.08 5.03
1410 4320 0.323360 TGCATGGGAGGGCTTTGTAC 60.323 55.000 0.00 0.00 0.00 2.90
1435 4348 3.515286 GCCGCATGCAGCTGACAT 61.515 61.111 20.43 17.21 42.61 3.06
1544 6071 7.792383 CAGTCATTTTCTTTTCACTGCATAG 57.208 36.000 0.00 0.00 0.00 2.23
1547 6074 6.009589 TCATTTTCTTTTCACTGCATAGGGA 58.990 36.000 0.00 0.00 33.57 4.20
1556 6083 0.537188 CTGCATAGGGAACGTGTCCT 59.463 55.000 13.48 13.48 46.92 3.85
1562 6089 0.608640 AGGGAACGTGTCCTGTCATC 59.391 55.000 8.90 0.00 46.92 2.92
1563 6090 0.608640 GGGAACGTGTCCTGTCATCT 59.391 55.000 13.94 0.00 46.92 2.90
1564 6091 1.002087 GGGAACGTGTCCTGTCATCTT 59.998 52.381 13.94 0.00 46.92 2.40
1565 6092 2.069273 GGAACGTGTCCTGTCATCTTG 58.931 52.381 8.87 0.00 43.98 3.02
1566 6093 2.548067 GGAACGTGTCCTGTCATCTTGT 60.548 50.000 8.87 0.00 43.98 3.16
1567 6094 3.305813 GGAACGTGTCCTGTCATCTTGTA 60.306 47.826 8.87 0.00 43.98 2.41
1568 6095 4.495422 GAACGTGTCCTGTCATCTTGTAT 58.505 43.478 0.00 0.00 0.00 2.29
1569 6096 5.393787 GGAACGTGTCCTGTCATCTTGTATA 60.394 44.000 8.87 0.00 43.98 1.47
1570 6097 4.995124 ACGTGTCCTGTCATCTTGTATAC 58.005 43.478 0.00 0.00 0.00 1.47
1571 6098 4.461431 ACGTGTCCTGTCATCTTGTATACA 59.539 41.667 0.08 0.08 0.00 2.29
1572 6099 4.798907 CGTGTCCTGTCATCTTGTATACAC 59.201 45.833 4.68 0.00 33.20 2.90
1573 6100 4.798907 GTGTCCTGTCATCTTGTATACACG 59.201 45.833 4.68 3.75 0.00 4.49
1574 6101 4.461431 TGTCCTGTCATCTTGTATACACGT 59.539 41.667 4.68 0.00 0.00 4.49
1575 6102 5.648960 TGTCCTGTCATCTTGTATACACGTA 59.351 40.000 4.68 0.00 0.00 3.57
1576 6103 6.151480 TGTCCTGTCATCTTGTATACACGTAA 59.849 38.462 4.68 0.00 0.00 3.18
1577 6104 6.471519 GTCCTGTCATCTTGTATACACGTAAC 59.528 42.308 4.68 5.11 0.00 2.50
1578 6105 6.151480 TCCTGTCATCTTGTATACACGTAACA 59.849 38.462 4.68 8.96 0.00 2.41
1579 6106 6.252869 CCTGTCATCTTGTATACACGTAACAC 59.747 42.308 4.68 0.00 0.00 3.32
1607 6134 7.130917 ACGCTACGTATTGTTAGAGAATGTAG 58.869 38.462 0.00 0.00 38.73 2.74
1626 6153 5.815581 TGTAGTAACTAGTTTCCGGTCCTA 58.184 41.667 14.49 0.00 0.00 2.94
1708 7224 8.329203 AGAATAATGAAACTTGAGGTTCAGTC 57.671 34.615 14.18 9.67 37.12 3.51
1709 7225 6.727824 ATAATGAAACTTGAGGTTCAGTCG 57.272 37.500 14.18 0.00 37.12 4.18
1720 7236 1.336609 GGTTCAGTCGCGTACCTTCTT 60.337 52.381 5.77 0.00 0.00 2.52
1728 7244 1.508632 GCGTACCTTCTTGTCAGCAA 58.491 50.000 0.00 0.00 0.00 3.91
1796 7312 2.457598 TCCTTGATCTCTTGTACGGCT 58.542 47.619 0.00 0.00 0.00 5.52
1799 7315 3.372206 CCTTGATCTCTTGTACGGCTTTG 59.628 47.826 0.00 0.00 0.00 2.77
1802 7318 3.006430 TGATCTCTTGTACGGCTTTGTCA 59.994 43.478 0.00 0.00 0.00 3.58
1811 7327 1.940613 ACGGCTTTGTCAGAACACTTC 59.059 47.619 0.00 0.00 34.35 3.01
1839 7355 7.096551 AGCTTGTTGTACAAAAAGTTCATTGT 58.903 30.769 30.28 11.14 37.69 2.71
1896 7434 2.627863 GCACCATGCGAATTGTAACA 57.372 45.000 0.00 0.00 31.71 2.41
1897 7435 2.940147 GCACCATGCGAATTGTAACAA 58.060 42.857 0.00 0.00 31.71 2.83
1898 7436 3.510719 GCACCATGCGAATTGTAACAAT 58.489 40.909 0.00 0.00 31.71 2.71
1899 7437 4.667262 GCACCATGCGAATTGTAACAATA 58.333 39.130 0.00 0.00 31.71 1.90
1900 7438 5.098893 GCACCATGCGAATTGTAACAATAA 58.901 37.500 0.00 0.00 31.71 1.40
1901 7439 5.574830 GCACCATGCGAATTGTAACAATAAA 59.425 36.000 0.00 0.00 31.71 1.40
1902 7440 6.255453 GCACCATGCGAATTGTAACAATAAAT 59.745 34.615 0.00 0.00 31.71 1.40
1903 7441 7.433719 GCACCATGCGAATTGTAACAATAAATA 59.566 33.333 0.00 0.00 31.71 1.40
1904 7442 8.957028 CACCATGCGAATTGTAACAATAAATAG 58.043 33.333 0.00 0.00 0.00 1.73
1905 7443 8.898761 ACCATGCGAATTGTAACAATAAATAGA 58.101 29.630 0.00 0.00 0.00 1.98
1910 7448 8.895845 GCGAATTGTAACAATAAATAGATGCTG 58.104 33.333 0.00 0.00 0.00 4.41
1921 7459 9.107177 CAATAAATAGATGCTGTCTCTCAGTTT 57.893 33.333 0.00 0.00 45.23 2.66
1948 7486 2.736531 CCAACTTGGCAAGTGGGC 59.263 61.111 34.63 0.00 45.29 5.36
1976 7514 4.337145 TGCTTTTGGTTTACGTATCCCAT 58.663 39.130 12.86 0.00 0.00 4.00
1977 7515 4.396790 TGCTTTTGGTTTACGTATCCCATC 59.603 41.667 12.86 5.77 0.00 3.51
1978 7516 4.638865 GCTTTTGGTTTACGTATCCCATCT 59.361 41.667 12.86 0.00 0.00 2.90
1979 7517 5.124936 GCTTTTGGTTTACGTATCCCATCTT 59.875 40.000 12.86 0.00 0.00 2.40
1980 7518 6.349860 GCTTTTGGTTTACGTATCCCATCTTT 60.350 38.462 12.86 0.00 0.00 2.52
1981 7519 6.503589 TTTGGTTTACGTATCCCATCTTTG 57.496 37.500 12.86 0.00 0.00 2.77
1982 7520 5.168647 TGGTTTACGTATCCCATCTTTGT 57.831 39.130 9.10 0.00 0.00 2.83
1983 7521 6.297080 TGGTTTACGTATCCCATCTTTGTA 57.703 37.500 9.10 0.00 0.00 2.41
1984 7522 6.709281 TGGTTTACGTATCCCATCTTTGTAA 58.291 36.000 9.10 0.00 0.00 2.41
1985 7523 6.819649 TGGTTTACGTATCCCATCTTTGTAAG 59.180 38.462 9.10 0.00 0.00 2.34
1996 7534 6.014012 CCCATCTTTGTAAGGGGAAACTTTA 58.986 40.000 0.00 0.00 41.49 1.85
2001 7539 8.541899 TCTTTGTAAGGGGAAACTTTAATTGT 57.458 30.769 0.00 0.00 32.02 2.71
2007 7545 3.743911 GGGGAAACTTTAATTGTTTGGCG 59.256 43.478 10.53 0.00 37.70 5.69
2019 7557 3.052455 TGTTTGGCGCTATGAGAAGAA 57.948 42.857 7.64 0.00 0.00 2.52
2028 7566 5.333952 GGCGCTATGAGAAGAATGAAGATTG 60.334 44.000 7.64 0.00 0.00 2.67
2029 7567 5.464722 GCGCTATGAGAAGAATGAAGATTGA 59.535 40.000 0.00 0.00 0.00 2.57
2035 7573 8.928270 ATGAGAAGAATGAAGATTGATTTTGC 57.072 30.769 0.00 0.00 0.00 3.68
2046 7584 7.927629 TGAAGATTGATTTTGCTAAAAAGTGCT 59.072 29.630 0.00 0.00 38.62 4.40
2056 7594 7.795482 TTGCTAAAAAGTGCTTACAGACTAA 57.205 32.000 0.00 0.00 0.00 2.24
2066 7604 7.201145 AGTGCTTACAGACTAACGTATAATGG 58.799 38.462 0.00 0.00 0.00 3.16
2067 7605 6.420008 GTGCTTACAGACTAACGTATAATGGG 59.580 42.308 0.00 0.00 0.00 4.00
2095 7633 1.178534 AAACCCGTTGTGCCCATGAG 61.179 55.000 0.00 0.00 0.00 2.90
2110 7648 3.007182 CCCATGAGGCAGAAAACAAATGT 59.993 43.478 0.00 0.00 0.00 2.71
2136 7674 7.478322 TGTCGATAAGTGAGGACAACTATAAC 58.522 38.462 0.00 0.00 36.55 1.89
2137 7675 7.338703 TGTCGATAAGTGAGGACAACTATAACT 59.661 37.037 0.00 0.00 36.55 2.24
2178 7777 6.790319 AGGTGGGATTCTTAGTTTTGTATGT 58.210 36.000 0.00 0.00 0.00 2.29
2179 7778 6.659242 AGGTGGGATTCTTAGTTTTGTATGTG 59.341 38.462 0.00 0.00 0.00 3.21
2189 7788 5.290493 AGTTTTGTATGTGGAGTCAGTGA 57.710 39.130 0.00 0.00 0.00 3.41
2279 7879 2.171341 AACGAAGGTTCAAGGAGAGC 57.829 50.000 0.00 0.00 0.00 4.09
2284 7884 2.948386 GGTTCAAGGAGAGCCCAAC 58.052 57.895 0.00 0.00 41.44 3.77
2285 7885 0.402121 GGTTCAAGGAGAGCCCAACT 59.598 55.000 0.00 0.00 41.44 3.16
2286 7886 1.202940 GGTTCAAGGAGAGCCCAACTT 60.203 52.381 0.00 0.00 41.44 2.66
2287 7887 2.587522 GTTCAAGGAGAGCCCAACTTT 58.412 47.619 0.00 0.00 37.41 2.66
2288 7888 2.276732 TCAAGGAGAGCCCAACTTTG 57.723 50.000 0.00 0.00 37.41 2.77
2289 7889 1.774254 TCAAGGAGAGCCCAACTTTGA 59.226 47.619 0.00 0.00 37.41 2.69
2290 7890 2.174639 TCAAGGAGAGCCCAACTTTGAA 59.825 45.455 0.00 0.00 37.41 2.69
2291 7891 3.160269 CAAGGAGAGCCCAACTTTGAAT 58.840 45.455 0.00 0.00 37.41 2.57
2292 7892 3.532641 AGGAGAGCCCAACTTTGAATT 57.467 42.857 0.00 0.00 37.41 2.17
2293 7893 4.657814 AGGAGAGCCCAACTTTGAATTA 57.342 40.909 0.00 0.00 37.41 1.40
2294 7894 4.998051 AGGAGAGCCCAACTTTGAATTAA 58.002 39.130 0.00 0.00 37.41 1.40
2295 7895 4.767409 AGGAGAGCCCAACTTTGAATTAAC 59.233 41.667 0.00 0.00 37.41 2.01
2296 7896 4.522789 GGAGAGCCCAACTTTGAATTAACA 59.477 41.667 0.00 0.00 34.14 2.41
2297 7897 5.010617 GGAGAGCCCAACTTTGAATTAACAA 59.989 40.000 0.00 0.00 34.14 2.83
2298 7898 6.462347 GGAGAGCCCAACTTTGAATTAACAAA 60.462 38.462 0.00 0.00 35.40 2.83
2299 7899 8.213417 GGAGAGCCCAACTTTGAATTAACAAAG 61.213 40.741 14.80 14.80 45.76 2.77
2308 7908 5.957910 TTGAATTAACAAAGCCAACAACG 57.042 34.783 0.00 0.00 0.00 4.10
2309 7909 4.363999 TGAATTAACAAAGCCAACAACGG 58.636 39.130 0.00 0.00 0.00 4.44
2310 7910 2.873133 TTAACAAAGCCAACAACGGG 57.127 45.000 0.00 0.00 0.00 5.28
2316 7916 3.365265 GCCAACAACGGGCCAGAG 61.365 66.667 10.86 4.09 45.87 3.35
2317 7917 2.429930 CCAACAACGGGCCAGAGA 59.570 61.111 10.86 0.00 0.00 3.10
2318 7918 1.002134 CCAACAACGGGCCAGAGAT 60.002 57.895 10.86 0.00 0.00 2.75
2319 7919 0.609131 CCAACAACGGGCCAGAGATT 60.609 55.000 10.86 0.00 0.00 2.40
2320 7920 1.339631 CCAACAACGGGCCAGAGATTA 60.340 52.381 10.86 0.00 0.00 1.75
2321 7921 1.737793 CAACAACGGGCCAGAGATTAC 59.262 52.381 10.86 0.00 0.00 1.89
2322 7922 0.981183 ACAACGGGCCAGAGATTACA 59.019 50.000 10.86 0.00 0.00 2.41
2323 7923 1.338769 ACAACGGGCCAGAGATTACAC 60.339 52.381 10.86 0.00 0.00 2.90
2324 7924 0.981183 AACGGGCCAGAGATTACACA 59.019 50.000 10.86 0.00 0.00 3.72
2325 7925 0.981183 ACGGGCCAGAGATTACACAA 59.019 50.000 10.86 0.00 0.00 3.33
2326 7926 1.066143 ACGGGCCAGAGATTACACAAG 60.066 52.381 10.86 0.00 0.00 3.16
2327 7927 1.743772 CGGGCCAGAGATTACACAAGG 60.744 57.143 4.39 0.00 0.00 3.61
2328 7928 1.383523 GGCCAGAGATTACACAAGGC 58.616 55.000 0.00 0.00 39.86 4.35
2329 7929 1.383523 GCCAGAGATTACACAAGGCC 58.616 55.000 0.00 0.00 34.71 5.19
2330 7930 1.340017 GCCAGAGATTACACAAGGCCA 60.340 52.381 5.01 0.00 34.71 5.36
2331 7931 2.359900 CCAGAGATTACACAAGGCCAC 58.640 52.381 5.01 0.00 0.00 5.01
2332 7932 2.359900 CAGAGATTACACAAGGCCACC 58.640 52.381 5.01 0.00 0.00 4.61
2333 7933 1.985159 AGAGATTACACAAGGCCACCA 59.015 47.619 5.01 0.00 0.00 4.17
2334 7934 2.375174 AGAGATTACACAAGGCCACCAA 59.625 45.455 5.01 0.00 0.00 3.67
2335 7935 3.153919 GAGATTACACAAGGCCACCAAA 58.846 45.455 5.01 0.00 0.00 3.28
2336 7936 3.571590 AGATTACACAAGGCCACCAAAA 58.428 40.909 5.01 0.00 0.00 2.44
2337 7937 3.320826 AGATTACACAAGGCCACCAAAAC 59.679 43.478 5.01 0.00 0.00 2.43
2338 7938 2.145397 TACACAAGGCCACCAAAACA 57.855 45.000 5.01 0.00 0.00 2.83
2339 7939 1.270907 ACACAAGGCCACCAAAACAA 58.729 45.000 5.01 0.00 0.00 2.83
2340 7940 1.066502 ACACAAGGCCACCAAAACAAC 60.067 47.619 5.01 0.00 0.00 3.32
2341 7941 0.539518 ACAAGGCCACCAAAACAACC 59.460 50.000 5.01 0.00 0.00 3.77
2342 7942 0.539051 CAAGGCCACCAAAACAACCA 59.461 50.000 5.01 0.00 0.00 3.67
2343 7943 1.065854 CAAGGCCACCAAAACAACCAA 60.066 47.619 5.01 0.00 0.00 3.67
2344 7944 0.539518 AGGCCACCAAAACAACCAAC 59.460 50.000 5.01 0.00 0.00 3.77
2345 7945 0.539518 GGCCACCAAAACAACCAACT 59.460 50.000 0.00 0.00 0.00 3.16
2346 7946 1.650825 GCCACCAAAACAACCAACTG 58.349 50.000 0.00 0.00 0.00 3.16
2347 7947 1.205893 GCCACCAAAACAACCAACTGA 59.794 47.619 0.00 0.00 0.00 3.41
2348 7948 2.354203 GCCACCAAAACAACCAACTGAA 60.354 45.455 0.00 0.00 0.00 3.02
2349 7949 3.258228 CCACCAAAACAACCAACTGAAC 58.742 45.455 0.00 0.00 0.00 3.18
2350 7950 3.306364 CCACCAAAACAACCAACTGAACA 60.306 43.478 0.00 0.00 0.00 3.18
2351 7951 3.677596 CACCAAAACAACCAACTGAACAC 59.322 43.478 0.00 0.00 0.00 3.32
2352 7952 3.322254 ACCAAAACAACCAACTGAACACA 59.678 39.130 0.00 0.00 0.00 3.72
2353 7953 4.202264 ACCAAAACAACCAACTGAACACAA 60.202 37.500 0.00 0.00 0.00 3.33
2354 7954 4.752101 CCAAAACAACCAACTGAACACAAA 59.248 37.500 0.00 0.00 0.00 2.83
2355 7955 5.237344 CCAAAACAACCAACTGAACACAAAA 59.763 36.000 0.00 0.00 0.00 2.44
2356 7956 6.238484 CCAAAACAACCAACTGAACACAAAAA 60.238 34.615 0.00 0.00 0.00 1.94
2379 7979 9.940166 AAAAAGAAAATAAACTACAGGTACACG 57.060 29.630 0.00 0.00 0.00 4.49
2380 7980 7.662604 AAGAAAATAAACTACAGGTACACGG 57.337 36.000 0.00 0.00 0.00 4.94
2381 7981 6.762333 AGAAAATAAACTACAGGTACACGGT 58.238 36.000 0.00 0.00 0.00 4.83
2382 7982 6.647895 AGAAAATAAACTACAGGTACACGGTG 59.352 38.462 6.58 6.58 0.00 4.94
2383 7983 5.726980 AATAAACTACAGGTACACGGTGA 57.273 39.130 16.29 0.00 0.00 4.02
2384 7984 5.927281 ATAAACTACAGGTACACGGTGAT 57.073 39.130 16.29 1.80 0.00 3.06
2385 7985 3.587797 AACTACAGGTACACGGTGATG 57.412 47.619 16.29 9.98 0.00 3.07
2386 7986 1.203994 ACTACAGGTACACGGTGATGC 59.796 52.381 16.29 4.13 0.00 3.91
2387 7987 0.533491 TACAGGTACACGGTGATGCC 59.467 55.000 16.29 12.80 0.00 4.40
2401 8001 4.789977 TGCCGAAGCAGCTTACAA 57.210 50.000 7.92 0.00 46.52 2.41
2402 8002 2.543578 TGCCGAAGCAGCTTACAAG 58.456 52.632 7.92 0.06 46.52 3.16
2403 8003 1.577328 TGCCGAAGCAGCTTACAAGC 61.577 55.000 7.92 9.23 46.52 4.01
2417 8017 5.344207 CTTACAAGCACCAAAGACTACAC 57.656 43.478 0.00 0.00 0.00 2.90
2418 8018 2.210116 ACAAGCACCAAAGACTACACG 58.790 47.619 0.00 0.00 0.00 4.49
2419 8019 1.069906 CAAGCACCAAAGACTACACGC 60.070 52.381 0.00 0.00 0.00 5.34
2420 8020 0.602905 AGCACCAAAGACTACACGCC 60.603 55.000 0.00 0.00 0.00 5.68
2421 8021 1.574702 GCACCAAAGACTACACGCCC 61.575 60.000 0.00 0.00 0.00 6.13
2422 8022 0.034896 CACCAAAGACTACACGCCCT 59.965 55.000 0.00 0.00 0.00 5.19
2423 8023 1.274167 CACCAAAGACTACACGCCCTA 59.726 52.381 0.00 0.00 0.00 3.53
2424 8024 2.093658 CACCAAAGACTACACGCCCTAT 60.094 50.000 0.00 0.00 0.00 2.57
2425 8025 3.131577 CACCAAAGACTACACGCCCTATA 59.868 47.826 0.00 0.00 0.00 1.31
2426 8026 3.383825 ACCAAAGACTACACGCCCTATAG 59.616 47.826 0.00 0.00 0.00 1.31
2427 8027 3.635373 CCAAAGACTACACGCCCTATAGA 59.365 47.826 0.00 0.00 0.00 1.98
2428 8028 4.098960 CCAAAGACTACACGCCCTATAGAA 59.901 45.833 0.00 0.00 0.00 2.10
2429 8029 5.282510 CAAAGACTACACGCCCTATAGAAG 58.717 45.833 0.00 0.00 0.00 2.85
2430 8030 4.167652 AGACTACACGCCCTATAGAAGT 57.832 45.455 0.00 0.00 0.00 3.01
2431 8031 5.301835 AGACTACACGCCCTATAGAAGTA 57.698 43.478 0.00 0.00 0.00 2.24
2432 8032 5.688807 AGACTACACGCCCTATAGAAGTAA 58.311 41.667 0.00 0.00 0.00 2.24
2433 8033 6.125029 AGACTACACGCCCTATAGAAGTAAA 58.875 40.000 0.00 0.00 0.00 2.01
2434 8034 6.039159 AGACTACACGCCCTATAGAAGTAAAC 59.961 42.308 0.00 0.00 0.00 2.01
2435 8035 5.653769 ACTACACGCCCTATAGAAGTAAACA 59.346 40.000 0.00 0.00 0.00 2.83
2436 8036 5.609533 ACACGCCCTATAGAAGTAAACAT 57.390 39.130 0.00 0.00 0.00 2.71
2437 8037 6.720112 ACACGCCCTATAGAAGTAAACATA 57.280 37.500 0.00 0.00 0.00 2.29
2438 8038 7.116075 ACACGCCCTATAGAAGTAAACATAA 57.884 36.000 0.00 0.00 0.00 1.90
2439 8039 7.732996 ACACGCCCTATAGAAGTAAACATAAT 58.267 34.615 0.00 0.00 0.00 1.28
2440 8040 8.863086 ACACGCCCTATAGAAGTAAACATAATA 58.137 33.333 0.00 0.00 0.00 0.98
2441 8041 9.701098 CACGCCCTATAGAAGTAAACATAATAA 57.299 33.333 0.00 0.00 0.00 1.40
2442 8042 9.924650 ACGCCCTATAGAAGTAAACATAATAAG 57.075 33.333 0.00 0.00 0.00 1.73
2443 8043 8.870879 CGCCCTATAGAAGTAAACATAATAAGC 58.129 37.037 0.00 0.00 0.00 3.09
2444 8044 9.720769 GCCCTATAGAAGTAAACATAATAAGCA 57.279 33.333 0.00 0.00 0.00 3.91
2451 8051 9.838339 AGAAGTAAACATAATAAGCACTAGCAT 57.162 29.630 0.00 0.00 45.49 3.79
2452 8052 9.869844 GAAGTAAACATAATAAGCACTAGCATG 57.130 33.333 0.00 0.00 45.49 4.06
2453 8053 9.613428 AAGTAAACATAATAAGCACTAGCATGA 57.387 29.630 0.00 0.00 45.49 3.07
2454 8054 9.613428 AGTAAACATAATAAGCACTAGCATGAA 57.387 29.630 0.00 0.00 45.49 2.57
2455 8055 9.869844 GTAAACATAATAAGCACTAGCATGAAG 57.130 33.333 0.00 0.00 45.49 3.02
2456 8056 8.511604 AAACATAATAAGCACTAGCATGAAGT 57.488 30.769 0.00 0.00 45.49 3.01
2457 8057 7.721286 ACATAATAAGCACTAGCATGAAGTC 57.279 36.000 0.00 0.00 45.49 3.01
2458 8058 7.275183 ACATAATAAGCACTAGCATGAAGTCA 58.725 34.615 0.00 0.00 45.49 3.41
2459 8059 7.770433 ACATAATAAGCACTAGCATGAAGTCAA 59.230 33.333 0.00 0.00 45.49 3.18
2460 8060 6.428385 AATAAGCACTAGCATGAAGTCAAC 57.572 37.500 0.00 0.00 45.49 3.18
2461 8061 2.341257 AGCACTAGCATGAAGTCAACG 58.659 47.619 0.00 0.00 45.49 4.10
2462 8062 1.394917 GCACTAGCATGAAGTCAACGG 59.605 52.381 0.00 0.00 41.58 4.44
2463 8063 2.930887 GCACTAGCATGAAGTCAACGGA 60.931 50.000 0.00 0.00 41.58 4.69
2464 8064 2.926200 CACTAGCATGAAGTCAACGGAG 59.074 50.000 0.00 0.00 0.00 4.63
2466 8066 2.086054 AGCATGAAGTCAACGGAGTC 57.914 50.000 0.00 0.00 45.00 3.36
2467 8067 1.079503 GCATGAAGTCAACGGAGTCC 58.920 55.000 0.00 0.00 45.00 3.85
2468 8068 1.338200 GCATGAAGTCAACGGAGTCCT 60.338 52.381 7.77 0.00 45.00 3.85
2469 8069 2.872038 GCATGAAGTCAACGGAGTCCTT 60.872 50.000 7.77 0.00 45.00 3.36
2470 8070 2.814280 TGAAGTCAACGGAGTCCTTC 57.186 50.000 7.77 3.67 45.00 3.46
2471 8071 2.036387 TGAAGTCAACGGAGTCCTTCA 58.964 47.619 7.77 6.40 45.00 3.02
2472 8072 2.432874 TGAAGTCAACGGAGTCCTTCAA 59.567 45.455 7.77 0.00 45.00 2.69
2473 8073 2.821991 AGTCAACGGAGTCCTTCAAG 57.178 50.000 7.77 0.00 45.00 3.02
2474 8074 2.040178 AGTCAACGGAGTCCTTCAAGT 58.960 47.619 7.77 0.00 45.00 3.16
2475 8075 2.135933 GTCAACGGAGTCCTTCAAGTG 58.864 52.381 7.77 0.00 45.00 3.16
2476 8076 2.036387 TCAACGGAGTCCTTCAAGTGA 58.964 47.619 7.77 0.00 45.00 3.41
2477 8077 2.432874 TCAACGGAGTCCTTCAAGTGAA 59.567 45.455 7.77 0.00 45.00 3.18
2478 8078 2.528041 ACGGAGTCCTTCAAGTGAAC 57.472 50.000 7.77 0.00 29.74 3.18
2479 8079 2.040178 ACGGAGTCCTTCAAGTGAACT 58.960 47.619 7.77 0.00 29.74 3.01
2480 8080 2.434702 ACGGAGTCCTTCAAGTGAACTT 59.565 45.455 7.77 0.00 29.74 2.66
2481 8081 3.118371 ACGGAGTCCTTCAAGTGAACTTT 60.118 43.478 7.77 0.00 29.74 2.66
2482 8082 4.100498 ACGGAGTCCTTCAAGTGAACTTTA 59.900 41.667 7.77 0.00 29.74 1.85
2483 8083 4.686554 CGGAGTCCTTCAAGTGAACTTTAG 59.313 45.833 7.77 0.00 33.11 1.85
2484 8084 5.612351 GGAGTCCTTCAAGTGAACTTTAGT 58.388 41.667 0.41 0.00 33.11 2.24
2485 8085 5.697178 GGAGTCCTTCAAGTGAACTTTAGTC 59.303 44.000 0.41 0.00 33.11 2.59
2486 8086 6.235231 AGTCCTTCAAGTGAACTTTAGTCA 57.765 37.500 0.00 0.00 33.11 3.41
2487 8087 6.284459 AGTCCTTCAAGTGAACTTTAGTCAG 58.716 40.000 0.00 0.00 33.11 3.51
2488 8088 6.049790 GTCCTTCAAGTGAACTTTAGTCAGT 58.950 40.000 0.00 0.00 33.11 3.41
2489 8089 7.069578 AGTCCTTCAAGTGAACTTTAGTCAGTA 59.930 37.037 0.00 0.00 33.11 2.74
2490 8090 7.382759 GTCCTTCAAGTGAACTTTAGTCAGTAG 59.617 40.741 0.00 0.00 33.11 2.57
2491 8091 6.647067 CCTTCAAGTGAACTTTAGTCAGTAGG 59.353 42.308 0.00 0.00 33.11 3.18
2492 8092 6.971726 TCAAGTGAACTTTAGTCAGTAGGA 57.028 37.500 0.00 0.00 33.11 2.94
2493 8093 6.746120 TCAAGTGAACTTTAGTCAGTAGGAC 58.254 40.000 0.00 0.00 39.43 3.85
2494 8094 6.322969 TCAAGTGAACTTTAGTCAGTAGGACA 59.677 38.462 0.00 0.00 40.68 4.02
2495 8095 6.984474 CAAGTGAACTTTAGTCAGTAGGACAA 59.016 38.462 0.00 0.00 40.68 3.18
2496 8096 7.494625 CAAGTGAACTTTAGTCAGTAGGACAAA 59.505 37.037 0.00 0.00 40.68 2.83
2497 8097 7.494952 AAGTGAACTTTAGTCAGTAGGACAAAC 59.505 37.037 0.00 0.00 40.13 2.93
2503 8103 3.320673 GTCAGTAGGACAAACAGAGGG 57.679 52.381 0.00 0.00 46.19 4.30
2504 8104 2.028020 GTCAGTAGGACAAACAGAGGGG 60.028 54.545 0.00 0.00 46.19 4.79
2505 8105 2.158219 TCAGTAGGACAAACAGAGGGGA 60.158 50.000 0.00 0.00 0.00 4.81
2506 8106 2.637872 CAGTAGGACAAACAGAGGGGAA 59.362 50.000 0.00 0.00 0.00 3.97
2507 8107 2.638363 AGTAGGACAAACAGAGGGGAAC 59.362 50.000 0.00 0.00 0.00 3.62
2508 8108 1.821088 AGGACAAACAGAGGGGAACT 58.179 50.000 0.00 0.00 0.00 3.01
2509 8109 2.136026 AGGACAAACAGAGGGGAACTT 58.864 47.619 0.00 0.00 0.00 2.66
2510 8110 2.106684 AGGACAAACAGAGGGGAACTTC 59.893 50.000 0.00 0.00 36.53 3.01
2511 8111 2.143925 GACAAACAGAGGGGAACTTCG 58.856 52.381 0.00 0.00 42.21 3.79
2512 8112 1.202770 ACAAACAGAGGGGAACTTCGG 60.203 52.381 0.00 0.00 42.21 4.30
2513 8113 0.400594 AAACAGAGGGGAACTTCGGG 59.599 55.000 0.00 0.00 42.21 5.14
2514 8114 2.125766 AACAGAGGGGAACTTCGGGC 62.126 60.000 0.00 0.00 42.21 6.13
2515 8115 3.391382 AGAGGGGAACTTCGGGCG 61.391 66.667 0.00 0.00 42.21 6.13
2516 8116 4.468689 GAGGGGAACTTCGGGCGG 62.469 72.222 0.00 0.00 0.00 6.13
2518 8118 4.468689 GGGGAACTTCGGGCGGAG 62.469 72.222 0.00 0.00 0.00 4.63
2531 8131 3.814268 CGGAGCCATTGCCCAACG 61.814 66.667 0.00 0.00 38.69 4.10
2532 8132 2.676471 GGAGCCATTGCCCAACGT 60.676 61.111 0.00 0.00 38.69 3.99
2533 8133 2.700773 GGAGCCATTGCCCAACGTC 61.701 63.158 0.00 0.00 38.69 4.34
2534 8134 3.039202 GAGCCATTGCCCAACGTCG 62.039 63.158 0.00 0.00 38.69 5.12
2535 8135 3.053291 GCCATTGCCCAACGTCGA 61.053 61.111 0.00 0.00 0.00 4.20
2536 8136 2.406616 GCCATTGCCCAACGTCGAT 61.407 57.895 0.00 0.00 0.00 3.59
2537 8137 1.429021 CCATTGCCCAACGTCGATG 59.571 57.895 2.26 2.26 0.00 3.84
2538 8138 1.429021 CATTGCCCAACGTCGATGG 59.571 57.895 14.25 14.25 37.71 3.51
2539 8139 1.024046 CATTGCCCAACGTCGATGGA 61.024 55.000 21.97 3.56 40.56 3.41
2540 8140 1.024579 ATTGCCCAACGTCGATGGAC 61.025 55.000 21.97 11.89 40.56 4.02
2541 8141 2.818274 GCCCAACGTCGATGGACC 60.818 66.667 21.97 9.33 40.56 4.46
2542 8142 2.508439 CCCAACGTCGATGGACCG 60.508 66.667 21.97 2.69 40.56 4.79
2543 8143 2.569657 CCAACGTCGATGGACCGA 59.430 61.111 16.00 0.00 40.56 4.69
2544 8144 1.516386 CCAACGTCGATGGACCGAG 60.516 63.158 16.00 0.00 40.56 4.63
2545 8145 2.158959 CAACGTCGATGGACCGAGC 61.159 63.158 9.90 0.00 40.17 5.03
2546 8146 3.352338 AACGTCGATGGACCGAGCC 62.352 63.158 9.90 0.00 40.17 4.70
2547 8147 4.570663 CGTCGATGGACCGAGCCC 62.571 72.222 1.93 0.00 40.17 5.19
2548 8148 3.148279 GTCGATGGACCGAGCCCT 61.148 66.667 0.00 0.00 39.43 5.19
2549 8149 2.833582 TCGATGGACCGAGCCCTC 60.834 66.667 0.00 0.00 34.19 4.30
2550 8150 3.147595 CGATGGACCGAGCCCTCA 61.148 66.667 0.00 0.00 0.00 3.86
2551 8151 2.502492 CGATGGACCGAGCCCTCAT 61.502 63.158 0.00 0.00 0.00 2.90
2552 8152 1.369321 GATGGACCGAGCCCTCATC 59.631 63.158 0.00 0.00 0.00 2.92
2553 8153 1.074926 ATGGACCGAGCCCTCATCT 60.075 57.895 0.00 0.00 0.00 2.90
2554 8154 0.188587 ATGGACCGAGCCCTCATCTA 59.811 55.000 0.00 0.00 0.00 1.98
2555 8155 0.755698 TGGACCGAGCCCTCATCTAC 60.756 60.000 0.00 0.00 0.00 2.59
2556 8156 1.465200 GGACCGAGCCCTCATCTACC 61.465 65.000 0.00 0.00 0.00 3.18
2557 8157 1.457831 ACCGAGCCCTCATCTACCC 60.458 63.158 0.00 0.00 0.00 3.69
2558 8158 1.152440 CCGAGCCCTCATCTACCCT 60.152 63.158 0.00 0.00 0.00 4.34
2559 8159 1.467678 CCGAGCCCTCATCTACCCTG 61.468 65.000 0.00 0.00 0.00 4.45
2560 8160 1.467678 CGAGCCCTCATCTACCCTGG 61.468 65.000 0.00 0.00 0.00 4.45
2561 8161 0.105453 GAGCCCTCATCTACCCTGGA 60.105 60.000 0.00 0.00 0.00 3.86
2562 8162 0.343372 AGCCCTCATCTACCCTGGAA 59.657 55.000 0.00 0.00 0.00 3.53
2563 8163 0.761802 GCCCTCATCTACCCTGGAAG 59.238 60.000 0.00 0.00 0.00 3.46
2578 8178 3.000727 CTGGAAGGTGTACATCGAAACC 58.999 50.000 0.00 3.07 0.00 3.27
2579 8179 2.369203 TGGAAGGTGTACATCGAAACCA 59.631 45.455 0.00 5.73 35.01 3.67
2580 8180 3.008594 TGGAAGGTGTACATCGAAACCAT 59.991 43.478 0.00 0.00 35.01 3.55
2581 8181 3.374058 GGAAGGTGTACATCGAAACCATG 59.626 47.826 0.00 0.00 35.01 3.66
2582 8182 2.356135 AGGTGTACATCGAAACCATGC 58.644 47.619 0.00 0.00 35.01 4.06
2583 8183 2.027192 AGGTGTACATCGAAACCATGCT 60.027 45.455 0.00 0.00 35.01 3.79
2584 8184 2.095853 GGTGTACATCGAAACCATGCTG 59.904 50.000 0.00 0.00 32.69 4.41
2585 8185 1.737236 TGTACATCGAAACCATGCTGC 59.263 47.619 0.00 0.00 0.00 5.25
2586 8186 2.009774 GTACATCGAAACCATGCTGCT 58.990 47.619 0.00 0.00 0.00 4.24
2587 8187 1.089920 ACATCGAAACCATGCTGCTC 58.910 50.000 0.00 0.00 0.00 4.26
2588 8188 0.379669 CATCGAAACCATGCTGCTCC 59.620 55.000 0.00 0.00 0.00 4.70
2589 8189 0.254178 ATCGAAACCATGCTGCTCCT 59.746 50.000 0.00 0.00 0.00 3.69
2590 8190 0.391661 TCGAAACCATGCTGCTCCTC 60.392 55.000 0.00 0.00 0.00 3.71
2591 8191 0.392193 CGAAACCATGCTGCTCCTCT 60.392 55.000 0.00 0.00 0.00 3.69
2592 8192 1.377536 GAAACCATGCTGCTCCTCTC 58.622 55.000 0.00 0.00 0.00 3.20
2593 8193 0.034670 AAACCATGCTGCTCCTCTCC 60.035 55.000 0.00 0.00 0.00 3.71
2594 8194 1.203441 AACCATGCTGCTCCTCTCCA 61.203 55.000 0.00 0.00 0.00 3.86
2595 8195 1.203441 ACCATGCTGCTCCTCTCCAA 61.203 55.000 0.00 0.00 0.00 3.53
2596 8196 0.034767 CCATGCTGCTCCTCTCCAAA 60.035 55.000 0.00 0.00 0.00 3.28
2597 8197 1.409802 CCATGCTGCTCCTCTCCAAAT 60.410 52.381 0.00 0.00 0.00 2.32
2598 8198 1.948145 CATGCTGCTCCTCTCCAAATC 59.052 52.381 0.00 0.00 0.00 2.17
2599 8199 0.254178 TGCTGCTCCTCTCCAAATCC 59.746 55.000 0.00 0.00 0.00 3.01
2600 8200 0.813210 GCTGCTCCTCTCCAAATCCG 60.813 60.000 0.00 0.00 0.00 4.18
2601 8201 0.179062 CTGCTCCTCTCCAAATCCGG 60.179 60.000 0.00 0.00 0.00 5.14
2602 8202 0.617535 TGCTCCTCTCCAAATCCGGA 60.618 55.000 6.61 6.61 0.00 5.14
2632 8232 4.082523 CCCTCGCCTTGGCTCGAA 62.083 66.667 10.12 0.00 34.07 3.71
2633 8233 2.047274 CCTCGCCTTGGCTCGAAA 60.047 61.111 10.12 0.00 34.07 3.46
2634 8234 2.103042 CCTCGCCTTGGCTCGAAAG 61.103 63.158 10.12 0.00 34.07 2.62
2635 8235 2.047274 TCGCCTTGGCTCGAAAGG 60.047 61.111 9.61 9.61 45.96 3.11
2657 8257 3.467226 GGACCGCCGGAAGATGGA 61.467 66.667 11.71 0.00 0.00 3.41
2658 8258 2.582436 GACCGCCGGAAGATGGAA 59.418 61.111 11.71 0.00 0.00 3.53
2659 8259 1.146263 GACCGCCGGAAGATGGAAT 59.854 57.895 11.71 0.00 0.00 3.01
2660 8260 0.463833 GACCGCCGGAAGATGGAATT 60.464 55.000 11.71 0.00 0.00 2.17
2661 8261 0.748005 ACCGCCGGAAGATGGAATTG 60.748 55.000 11.71 0.00 0.00 2.32
2662 8262 1.356624 CGCCGGAAGATGGAATTGC 59.643 57.895 5.05 0.00 0.00 3.56
2663 8263 1.735973 GCCGGAAGATGGAATTGCC 59.264 57.895 5.05 0.00 37.10 4.52
2664 8264 1.738346 GCCGGAAGATGGAATTGCCC 61.738 60.000 5.05 0.00 34.97 5.36
2665 8265 0.106519 CCGGAAGATGGAATTGCCCT 60.107 55.000 0.00 0.00 34.97 5.19
2666 8266 1.312815 CGGAAGATGGAATTGCCCTC 58.687 55.000 0.00 0.00 34.97 4.30
2667 8267 1.697284 GGAAGATGGAATTGCCCTCC 58.303 55.000 0.00 0.00 32.17 4.30
2668 8268 1.697284 GAAGATGGAATTGCCCTCCC 58.303 55.000 0.00 0.00 32.17 4.30
2669 8269 1.216427 GAAGATGGAATTGCCCTCCCT 59.784 52.381 0.00 0.00 32.17 4.20
2670 8270 2.212752 AGATGGAATTGCCCTCCCTA 57.787 50.000 0.00 0.00 32.17 3.53
2671 8271 2.061061 AGATGGAATTGCCCTCCCTAG 58.939 52.381 0.00 0.00 32.17 3.02
2672 8272 2.057922 GATGGAATTGCCCTCCCTAGA 58.942 52.381 0.00 0.00 34.97 2.43
2673 8273 1.511613 TGGAATTGCCCTCCCTAGAG 58.488 55.000 0.00 0.00 40.09 2.43
2674 8274 0.109532 GGAATTGCCCTCCCTAGAGC 59.890 60.000 0.00 0.00 38.96 4.09
2675 8275 0.839946 GAATTGCCCTCCCTAGAGCA 59.160 55.000 0.00 0.00 38.96 4.26
2676 8276 4.579354 TTGCCCTCCCTAGAGCAA 57.421 55.556 0.00 0.00 42.60 3.91
2677 8277 2.300996 TTGCCCTCCCTAGAGCAAG 58.699 57.895 0.00 0.00 40.13 4.01
2678 8278 1.274703 TTGCCCTCCCTAGAGCAAGG 61.275 60.000 0.00 0.00 40.13 3.61
2679 8279 1.383248 GCCCTCCCTAGAGCAAGGA 60.383 63.158 0.00 0.00 39.15 3.36
2680 8280 0.983378 GCCCTCCCTAGAGCAAGGAA 60.983 60.000 0.00 0.00 39.15 3.36
2681 8281 1.584724 CCCTCCCTAGAGCAAGGAAA 58.415 55.000 0.00 0.00 39.15 3.13
2682 8282 1.488393 CCCTCCCTAGAGCAAGGAAAG 59.512 57.143 0.00 0.00 39.15 2.62
2683 8283 1.488393 CCTCCCTAGAGCAAGGAAAGG 59.512 57.143 0.00 4.64 39.15 3.11
2685 8285 0.106967 CCCTAGAGCAAGGAAAGGGC 60.107 60.000 0.00 0.00 40.51 5.19
2686 8286 0.620556 CCTAGAGCAAGGAAAGGGCA 59.379 55.000 0.00 0.00 39.15 5.36
2687 8287 1.213926 CCTAGAGCAAGGAAAGGGCAT 59.786 52.381 0.00 0.00 39.15 4.40
2688 8288 2.295885 CTAGAGCAAGGAAAGGGCATG 58.704 52.381 0.00 0.00 0.00 4.06
2689 8289 0.700564 AGAGCAAGGAAAGGGCATGA 59.299 50.000 0.00 0.00 0.00 3.07
2690 8290 1.287146 AGAGCAAGGAAAGGGCATGAT 59.713 47.619 0.00 0.00 0.00 2.45
2691 8291 2.105766 GAGCAAGGAAAGGGCATGATT 58.894 47.619 0.00 0.00 0.00 2.57
2692 8292 2.100418 GAGCAAGGAAAGGGCATGATTC 59.900 50.000 0.00 0.00 0.00 2.52
2693 8293 2.105766 GCAAGGAAAGGGCATGATTCT 58.894 47.619 0.00 0.00 0.00 2.40
2694 8294 2.159142 GCAAGGAAAGGGCATGATTCTG 60.159 50.000 0.00 0.00 0.00 3.02
2695 8295 2.429610 CAAGGAAAGGGCATGATTCTGG 59.570 50.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.195698 GATCCAGGTCGGTTGCGC 61.196 66.667 0.00 0.00 35.57 6.09
12 13 1.811266 CAGATCCAGGTCGGTTGCG 60.811 63.158 0.00 0.00 35.57 4.85
13 14 1.450312 CCAGATCCAGGTCGGTTGC 60.450 63.158 0.00 0.00 35.57 4.17
14 15 1.221840 CCCAGATCCAGGTCGGTTG 59.778 63.158 1.54 0.00 35.57 3.77
15 16 2.670148 GCCCAGATCCAGGTCGGTT 61.670 63.158 0.89 0.00 35.57 4.44
16 17 3.083997 GCCCAGATCCAGGTCGGT 61.084 66.667 0.89 0.00 35.57 4.69
17 18 4.227134 CGCCCAGATCCAGGTCGG 62.227 72.222 0.00 0.00 0.00 4.79
18 19 4.227134 CCGCCCAGATCCAGGTCG 62.227 72.222 0.00 0.00 0.00 4.79
19 20 2.317149 CTTCCGCCCAGATCCAGGTC 62.317 65.000 0.89 0.00 0.00 3.85
20 21 2.285368 TTCCGCCCAGATCCAGGT 60.285 61.111 0.89 0.00 0.00 4.00
21 22 2.037620 CTCTTCCGCCCAGATCCAGG 62.038 65.000 0.00 0.00 0.00 4.45
22 23 1.045350 TCTCTTCCGCCCAGATCCAG 61.045 60.000 0.00 0.00 0.00 3.86
23 24 0.399091 ATCTCTTCCGCCCAGATCCA 60.399 55.000 0.00 0.00 0.00 3.41
24 25 0.034616 CATCTCTTCCGCCCAGATCC 59.965 60.000 0.00 0.00 0.00 3.36
25 26 0.034616 CCATCTCTTCCGCCCAGATC 59.965 60.000 0.00 0.00 0.00 2.75
26 27 0.399091 TCCATCTCTTCCGCCCAGAT 60.399 55.000 0.00 0.00 0.00 2.90
27 28 0.617535 TTCCATCTCTTCCGCCCAGA 60.618 55.000 0.00 0.00 0.00 3.86
28 29 0.471617 ATTCCATCTCTTCCGCCCAG 59.528 55.000 0.00 0.00 0.00 4.45
29 30 0.181114 CATTCCATCTCTTCCGCCCA 59.819 55.000 0.00 0.00 0.00 5.36
30 31 0.536006 CCATTCCATCTCTTCCGCCC 60.536 60.000 0.00 0.00 0.00 6.13
31 32 1.169034 GCCATTCCATCTCTTCCGCC 61.169 60.000 0.00 0.00 0.00 6.13
32 33 0.179034 AGCCATTCCATCTCTTCCGC 60.179 55.000 0.00 0.00 0.00 5.54
33 34 1.590932 CAGCCATTCCATCTCTTCCG 58.409 55.000 0.00 0.00 0.00 4.30
34 35 1.978454 CCAGCCATTCCATCTCTTCC 58.022 55.000 0.00 0.00 0.00 3.46
35 36 1.316651 GCCAGCCATTCCATCTCTTC 58.683 55.000 0.00 0.00 0.00 2.87
36 37 0.106318 GGCCAGCCATTCCATCTCTT 60.106 55.000 3.12 0.00 35.81 2.85
37 38 1.284111 TGGCCAGCCATTCCATCTCT 61.284 55.000 7.43 0.00 41.89 3.10
38 39 1.228228 TGGCCAGCCATTCCATCTC 59.772 57.895 7.43 0.00 41.89 2.75
39 40 3.430471 TGGCCAGCCATTCCATCT 58.570 55.556 7.43 0.00 41.89 2.90
82 83 3.694058 ATCTCCTGCGGCTGCTTGG 62.694 63.158 20.27 19.88 43.34 3.61
83 84 2.124819 ATCTCCTGCGGCTGCTTG 60.125 61.111 20.27 11.42 43.34 4.01
84 85 2.124819 CATCTCCTGCGGCTGCTT 60.125 61.111 20.27 0.00 43.34 3.91
85 86 4.172512 CCATCTCCTGCGGCTGCT 62.173 66.667 20.27 0.00 43.34 4.24
87 88 4.478371 TGCCATCTCCTGCGGCTG 62.478 66.667 0.00 0.00 46.39 4.85
88 89 4.479993 GTGCCATCTCCTGCGGCT 62.480 66.667 0.00 0.00 46.39 5.52
103 104 2.815211 CTCGATGTGGTGGCCGTG 60.815 66.667 0.00 0.00 0.00 4.94
104 105 4.082523 CCTCGATGTGGTGGCCGT 62.083 66.667 0.00 0.00 0.00 5.68
106 107 2.650813 CTAGCCTCGATGTGGTGGCC 62.651 65.000 7.44 0.00 45.94 5.36
107 108 1.227380 CTAGCCTCGATGTGGTGGC 60.227 63.158 3.02 3.02 45.21 5.01
108 109 1.443407 CCTAGCCTCGATGTGGTGG 59.557 63.158 0.00 0.00 0.00 4.61
109 110 1.043116 TCCCTAGCCTCGATGTGGTG 61.043 60.000 0.00 0.00 0.00 4.17
110 111 0.325296 TTCCCTAGCCTCGATGTGGT 60.325 55.000 0.00 0.00 0.00 4.16
111 112 0.390860 CTTCCCTAGCCTCGATGTGG 59.609 60.000 0.00 0.00 0.00 4.17
112 113 0.249657 GCTTCCCTAGCCTCGATGTG 60.250 60.000 0.00 0.00 44.48 3.21
113 114 2.128729 GCTTCCCTAGCCTCGATGT 58.871 57.895 0.00 0.00 44.48 3.06
122 123 2.143419 ATCGGGGCTGCTTCCCTAG 61.143 63.158 11.49 8.14 45.80 3.02
123 124 2.040884 ATCGGGGCTGCTTCCCTA 60.041 61.111 11.49 2.00 45.80 3.53
124 125 3.801997 CATCGGGGCTGCTTCCCT 61.802 66.667 11.49 0.00 45.80 4.20
131 132 1.616091 AAAATTGGGCATCGGGGCTG 61.616 55.000 2.00 0.00 42.84 4.85
132 133 0.909133 AAAAATTGGGCATCGGGGCT 60.909 50.000 2.00 0.00 42.84 5.19
133 134 1.601703 AAAAATTGGGCATCGGGGC 59.398 52.632 0.00 0.00 42.44 5.80
166 167 5.659463 TGGTGCAACATAATTATTGAAGGC 58.341 37.500 0.00 0.00 39.98 4.35
167 168 8.721019 AATTGGTGCAACATAATTATTGAAGG 57.279 30.769 4.62 0.00 39.98 3.46
282 300 2.110011 ACAGAATGCCCTTAGGGTGTTT 59.890 45.455 19.76 9.95 46.51 2.83
300 318 1.331756 GCATCCATTTCCTGCGTACAG 59.668 52.381 0.00 0.00 44.05 2.74
320 338 0.620556 ACCAGAGTGCCCTAACATGG 59.379 55.000 0.00 0.00 36.04 3.66
321 339 2.496899 AACCAGAGTGCCCTAACATG 57.503 50.000 0.00 0.00 0.00 3.21
322 340 3.622455 GCTAAACCAGAGTGCCCTAACAT 60.622 47.826 0.00 0.00 0.00 2.71
351 369 6.281405 ACTTGTAACAGTCTACAGTGGAAAG 58.719 40.000 0.00 0.00 33.44 2.62
360 378 7.040494 GGGGAGAAATACTTGTAACAGTCTAC 58.960 42.308 0.00 0.00 0.00 2.59
427 3206 0.679960 GCATAAGTTGGTTCCCGCCT 60.680 55.000 0.00 0.00 0.00 5.52
430 3209 1.472480 CCAAGCATAAGTTGGTTCCCG 59.528 52.381 0.00 0.00 44.02 5.14
432 3211 2.755103 CCTCCAAGCATAAGTTGGTTCC 59.245 50.000 1.98 0.00 44.02 3.62
433 3212 2.755103 CCCTCCAAGCATAAGTTGGTTC 59.245 50.000 1.98 0.00 44.02 3.62
436 3215 2.094675 CACCCTCCAAGCATAAGTTGG 58.905 52.381 0.00 0.00 45.18 3.77
441 3220 0.331278 CCACCACCCTCCAAGCATAA 59.669 55.000 0.00 0.00 0.00 1.90
446 3225 2.282462 GCACCACCACCCTCCAAG 60.282 66.667 0.00 0.00 0.00 3.61
475 3254 5.510430 AGTTAAATCTGGAGTTTGATCCCC 58.490 41.667 0.00 0.00 38.72 4.81
495 3274 9.220767 GATATTCCGCTTTTTATCATAGGAGTT 57.779 33.333 0.00 0.00 0.00 3.01
502 3281 9.903682 CTGAATTGATATTCCGCTTTTTATCAT 57.096 29.630 0.00 0.00 39.56 2.45
521 3300 1.089920 CTTCGCCTCCCACTGAATTG 58.910 55.000 0.00 0.00 0.00 2.32
523 3302 0.693049 AACTTCGCCTCCCACTGAAT 59.307 50.000 0.00 0.00 0.00 2.57
526 3305 0.390472 GAGAACTTCGCCTCCCACTG 60.390 60.000 0.00 0.00 0.00 3.66
593 3380 8.879342 AAAACAGTACAGATATAGATGCTCAC 57.121 34.615 0.00 0.00 0.00 3.51
633 3422 4.070716 GAGATCATATGGTCCTTTGCAGG 58.929 47.826 12.50 0.00 42.50 4.85
672 3461 5.648092 TCGACATGTTAGATGAGAGAGACAA 59.352 40.000 0.00 0.00 0.00 3.18
687 3476 5.839063 TCTTCTATCCCCTATTCGACATGTT 59.161 40.000 0.00 0.00 0.00 2.71
690 3479 5.893500 TCTCTTCTATCCCCTATTCGACAT 58.106 41.667 0.00 0.00 0.00 3.06
926 3741 0.517316 GAAATGTGCACCGACAGGAC 59.483 55.000 15.69 0.00 41.02 3.85
948 3767 2.555199 GGAGCCTTGCATATATAGCCG 58.445 52.381 0.00 0.00 0.00 5.52
1016 3849 2.285827 TCGCTTCAAGCTAGCTCTTC 57.714 50.000 19.65 5.12 39.60 2.87
1028 3861 6.569780 TCAATTAGTAGCTACAATCGCTTCA 58.430 36.000 25.28 0.00 38.86 3.02
1282 4131 2.310233 CCTGCCGCCGATGAATACG 61.310 63.158 0.00 0.00 0.00 3.06
1285 4134 4.181010 AGCCTGCCGCCGATGAAT 62.181 61.111 0.00 0.00 38.78 2.57
1410 4320 1.208358 CTGCATGCGGCCGAATATG 59.792 57.895 33.48 27.66 43.89 1.78
1435 4348 9.695526 GTACGTGTATATATTGTTATTGTCCCA 57.304 33.333 0.00 0.00 0.00 4.37
1547 6074 2.910688 ACAAGATGACAGGACACGTT 57.089 45.000 0.00 0.00 0.00 3.99
1556 6083 5.796437 CGTGTTACGTGTATACAAGATGACA 59.204 40.000 23.14 18.83 36.74 3.58
1580 6107 6.909357 ACATTCTCTAACAATACGTAGCGTAC 59.091 38.462 0.08 0.00 45.07 3.67
1581 6108 7.019774 ACATTCTCTAACAATACGTAGCGTA 57.980 36.000 0.08 3.85 46.28 4.42
1582 6109 5.888105 ACATTCTCTAACAATACGTAGCGT 58.112 37.500 0.08 0.00 44.35 5.07
1583 6110 7.130917 ACTACATTCTCTAACAATACGTAGCG 58.869 38.462 0.08 0.00 0.00 4.26
1584 6111 9.941664 TTACTACATTCTCTAACAATACGTAGC 57.058 33.333 0.08 0.00 0.00 3.58
1598 6125 6.861144 ACCGGAAACTAGTTACTACATTCTC 58.139 40.000 9.46 0.00 0.00 2.87
1607 6134 4.702131 TCTGTAGGACCGGAAACTAGTTAC 59.298 45.833 9.46 4.39 0.00 2.50
1626 6153 9.730420 GTTATTTTACATGTCTTTGTTGTCTGT 57.270 29.630 0.00 0.00 0.00 3.41
1651 6344 6.088016 TGCTATTTCAGAAACTTTGCATGT 57.912 33.333 0.00 0.00 0.00 3.21
1708 7224 0.666274 TGCTGACAAGAAGGTACGCG 60.666 55.000 3.53 3.53 0.00 6.01
1709 7225 1.508632 TTGCTGACAAGAAGGTACGC 58.491 50.000 0.00 0.00 0.00 4.42
1720 7236 2.672874 GTGCACTATCGAATTGCTGACA 59.327 45.455 10.32 0.00 37.16 3.58
1728 7244 4.082787 CCACTTTTTGGTGCACTATCGAAT 60.083 41.667 17.98 0.00 41.10 3.34
1796 7312 4.054780 AGCTACGAAGTGTTCTGACAAA 57.945 40.909 0.00 0.00 45.73 2.83
1799 7315 3.381949 ACAAGCTACGAAGTGTTCTGAC 58.618 45.455 0.00 0.00 45.73 3.51
1802 7318 3.793559 ACAACAAGCTACGAAGTGTTCT 58.206 40.909 0.00 0.00 45.73 3.01
1811 7327 6.252281 TGAACTTTTTGTACAACAAGCTACG 58.748 36.000 26.77 10.56 39.53 3.51
1875 7391 2.250188 GTTACAATTCGCATGGTGCAC 58.750 47.619 8.80 8.80 45.36 4.57
1880 7396 9.897744 ATCTATTTATTGTTACAATTCGCATGG 57.102 29.630 16.08 5.89 0.00 3.66
1889 7427 9.890629 AGAGACAGCATCTATTTATTGTTACAA 57.109 29.630 0.00 0.00 38.00 2.41
1890 7428 9.534565 GAGAGACAGCATCTATTTATTGTTACA 57.465 33.333 0.00 0.00 38.00 2.41
1891 7429 9.534565 TGAGAGACAGCATCTATTTATTGTTAC 57.465 33.333 0.00 0.00 38.00 2.50
1892 7430 9.755804 CTGAGAGACAGCATCTATTTATTGTTA 57.244 33.333 0.00 0.00 38.00 2.41
1893 7431 8.659925 CTGAGAGACAGCATCTATTTATTGTT 57.340 34.615 0.00 0.00 38.00 2.83
1910 7448 6.282199 TGGTACCTATTGAAACTGAGAGAC 57.718 41.667 14.36 0.00 0.00 3.36
1921 7459 4.202524 ACTTGCCAAGTTGGTACCTATTGA 60.203 41.667 22.85 1.07 39.04 2.57
1947 7485 2.923020 CGTAAACCAAAAGCATCATGGC 59.077 45.455 0.00 0.00 37.77 4.40
1948 7486 4.173036 ACGTAAACCAAAAGCATCATGG 57.827 40.909 0.00 0.00 40.16 3.66
1976 7514 8.541899 ACAATTAAAGTTTCCCCTTACAAAGA 57.458 30.769 0.00 0.00 0.00 2.52
1977 7515 9.607988 AAACAATTAAAGTTTCCCCTTACAAAG 57.392 29.630 0.00 0.00 34.27 2.77
1978 7516 9.384764 CAAACAATTAAAGTTTCCCCTTACAAA 57.615 29.630 6.46 0.00 37.10 2.83
1979 7517 7.988028 CCAAACAATTAAAGTTTCCCCTTACAA 59.012 33.333 6.46 0.00 37.10 2.41
1980 7518 7.501844 CCAAACAATTAAAGTTTCCCCTTACA 58.498 34.615 6.46 0.00 37.10 2.41
1981 7519 6.425721 GCCAAACAATTAAAGTTTCCCCTTAC 59.574 38.462 6.46 0.00 37.10 2.34
1982 7520 6.526526 GCCAAACAATTAAAGTTTCCCCTTA 58.473 36.000 6.46 0.00 37.10 2.69
1983 7521 5.373222 GCCAAACAATTAAAGTTTCCCCTT 58.627 37.500 6.46 0.00 37.10 3.95
1984 7522 4.502431 CGCCAAACAATTAAAGTTTCCCCT 60.502 41.667 6.46 0.00 37.10 4.79
1985 7523 3.743911 CGCCAAACAATTAAAGTTTCCCC 59.256 43.478 6.46 0.06 37.10 4.81
1996 7534 4.009675 TCTTCTCATAGCGCCAAACAATT 58.990 39.130 2.29 0.00 0.00 2.32
2001 7539 3.872696 TCATTCTTCTCATAGCGCCAAA 58.127 40.909 2.29 0.00 0.00 3.28
2019 7557 8.715088 GCACTTTTTAGCAAAATCAATCTTCAT 58.285 29.630 0.00 0.00 31.28 2.57
2028 7566 7.862873 AGTCTGTAAGCACTTTTTAGCAAAATC 59.137 33.333 0.00 0.00 31.28 2.17
2029 7567 7.716612 AGTCTGTAAGCACTTTTTAGCAAAAT 58.283 30.769 0.00 0.00 31.28 1.82
2034 7572 6.073927 ACGTTAGTCTGTAAGCACTTTTTAGC 60.074 38.462 0.00 0.00 0.00 3.09
2035 7573 7.404139 ACGTTAGTCTGTAAGCACTTTTTAG 57.596 36.000 0.00 0.00 0.00 1.85
2039 7577 9.084164 CATTATACGTTAGTCTGTAAGCACTTT 57.916 33.333 0.00 0.00 0.00 2.66
2040 7578 7.705325 CCATTATACGTTAGTCTGTAAGCACTT 59.295 37.037 0.00 0.00 0.00 3.16
2042 7580 6.420008 CCCATTATACGTTAGTCTGTAAGCAC 59.580 42.308 0.00 0.00 0.00 4.40
2046 7584 8.297470 AGTTCCCATTATACGTTAGTCTGTAA 57.703 34.615 0.00 0.00 0.00 2.41
2056 7594 6.825213 GGGTTTTTCTAGTTCCCATTATACGT 59.175 38.462 0.00 0.00 38.15 3.57
2066 7604 3.549423 GCACAACGGGTTTTTCTAGTTCC 60.549 47.826 0.00 0.00 0.00 3.62
2067 7605 3.549423 GGCACAACGGGTTTTTCTAGTTC 60.549 47.826 0.00 0.00 0.00 3.01
2095 7633 3.701241 TCGACAACATTTGTTTTCTGCC 58.299 40.909 7.70 0.00 45.52 4.85
2099 7637 7.323656 CCTCACTTATCGACAACATTTGTTTTC 59.676 37.037 0.00 0.00 45.52 2.29
2104 7642 5.408299 TGTCCTCACTTATCGACAACATTTG 59.592 40.000 0.00 0.00 32.51 2.32
2110 7648 4.866508 AGTTGTCCTCACTTATCGACAA 57.133 40.909 0.00 0.00 41.60 3.18
2136 7674 6.013725 TCCCACCTTATATGCCTACATGTTAG 60.014 42.308 2.30 0.00 37.04 2.34
2137 7675 5.847265 TCCCACCTTATATGCCTACATGTTA 59.153 40.000 2.30 0.00 37.04 2.41
2142 7680 5.162637 AGAATCCCACCTTATATGCCTACA 58.837 41.667 0.00 0.00 0.00 2.74
2178 7777 1.637338 AGAGTGCATCACTGACTCCA 58.363 50.000 3.98 0.00 45.44 3.86
2179 7778 2.344950 CAAGAGTGCATCACTGACTCC 58.655 52.381 3.98 0.00 45.44 3.85
2189 7788 2.362120 GCCAGCCCAAGAGTGCAT 60.362 61.111 0.00 0.00 0.00 3.96
2210 7810 1.340991 ACCATGACTATGTTGGCCCAC 60.341 52.381 0.00 0.00 33.66 4.61
2260 7860 1.270893 GGCTCTCCTTGAACCTTCGTT 60.271 52.381 0.00 0.00 33.88 3.85
2261 7861 0.321996 GGCTCTCCTTGAACCTTCGT 59.678 55.000 0.00 0.00 0.00 3.85
2262 7862 0.391793 GGGCTCTCCTTGAACCTTCG 60.392 60.000 0.00 0.00 31.75 3.79
2263 7863 0.693049 TGGGCTCTCCTTGAACCTTC 59.307 55.000 0.00 0.00 36.20 3.46
2264 7864 1.149101 TTGGGCTCTCCTTGAACCTT 58.851 50.000 0.00 0.00 36.20 3.50
2265 7865 0.402121 GTTGGGCTCTCCTTGAACCT 59.598 55.000 0.00 0.00 36.20 3.50
2266 7866 0.402121 AGTTGGGCTCTCCTTGAACC 59.598 55.000 0.00 0.00 36.20 3.62
2267 7867 2.278332 AAGTTGGGCTCTCCTTGAAC 57.722 50.000 0.00 0.00 36.20 3.18
2268 7868 2.174639 TCAAAGTTGGGCTCTCCTTGAA 59.825 45.455 0.00 0.00 36.20 2.69
2269 7869 1.774254 TCAAAGTTGGGCTCTCCTTGA 59.226 47.619 0.00 0.00 36.20 3.02
2270 7870 2.276732 TCAAAGTTGGGCTCTCCTTG 57.723 50.000 0.00 0.00 36.20 3.61
2271 7871 3.532641 ATTCAAAGTTGGGCTCTCCTT 57.467 42.857 0.00 0.00 36.20 3.36
2272 7872 3.532641 AATTCAAAGTTGGGCTCTCCT 57.467 42.857 0.00 0.00 36.20 3.69
2273 7873 4.522789 TGTTAATTCAAAGTTGGGCTCTCC 59.477 41.667 0.00 0.00 0.00 3.71
2274 7874 5.705609 TGTTAATTCAAAGTTGGGCTCTC 57.294 39.130 0.00 0.00 0.00 3.20
2275 7875 6.478512 TTTGTTAATTCAAAGTTGGGCTCT 57.521 33.333 0.00 0.00 34.02 4.09
2276 7876 6.769608 CTTTGTTAATTCAAAGTTGGGCTC 57.230 37.500 10.16 0.00 45.08 4.70
2285 7885 5.292101 CCGTTGTTGGCTTTGTTAATTCAAA 59.708 36.000 0.00 0.00 36.18 2.69
2286 7886 4.806247 CCGTTGTTGGCTTTGTTAATTCAA 59.194 37.500 0.00 0.00 0.00 2.69
2287 7887 4.363999 CCGTTGTTGGCTTTGTTAATTCA 58.636 39.130 0.00 0.00 0.00 2.57
2288 7888 3.738791 CCCGTTGTTGGCTTTGTTAATTC 59.261 43.478 0.00 0.00 0.00 2.17
2289 7889 3.723260 CCCGTTGTTGGCTTTGTTAATT 58.277 40.909 0.00 0.00 0.00 1.40
2290 7890 2.547007 GCCCGTTGTTGGCTTTGTTAAT 60.547 45.455 0.00 0.00 45.70 1.40
2291 7891 1.202428 GCCCGTTGTTGGCTTTGTTAA 60.202 47.619 0.00 0.00 45.70 2.01
2292 7892 0.386113 GCCCGTTGTTGGCTTTGTTA 59.614 50.000 0.00 0.00 45.70 2.41
2293 7893 1.142965 GCCCGTTGTTGGCTTTGTT 59.857 52.632 0.00 0.00 45.70 2.83
2294 7894 2.811799 GCCCGTTGTTGGCTTTGT 59.188 55.556 0.00 0.00 45.70 2.83
2300 7900 0.609131 AATCTCTGGCCCGTTGTTGG 60.609 55.000 0.00 0.00 0.00 3.77
2301 7901 1.737793 GTAATCTCTGGCCCGTTGTTG 59.262 52.381 0.00 0.00 0.00 3.33
2302 7902 1.349688 TGTAATCTCTGGCCCGTTGTT 59.650 47.619 0.00 0.00 0.00 2.83
2303 7903 0.981183 TGTAATCTCTGGCCCGTTGT 59.019 50.000 0.00 0.00 0.00 3.32
2304 7904 1.338674 TGTGTAATCTCTGGCCCGTTG 60.339 52.381 0.00 0.00 0.00 4.10
2305 7905 0.981183 TGTGTAATCTCTGGCCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
2306 7906 0.981183 TTGTGTAATCTCTGGCCCGT 59.019 50.000 0.00 0.00 0.00 5.28
2307 7907 1.656652 CTTGTGTAATCTCTGGCCCG 58.343 55.000 0.00 0.00 0.00 6.13
2308 7908 2.019156 GCCTTGTGTAATCTCTGGCCC 61.019 57.143 0.00 0.00 33.45 5.80
2309 7909 1.383523 GCCTTGTGTAATCTCTGGCC 58.616 55.000 0.00 0.00 33.45 5.36
2310 7910 1.340017 TGGCCTTGTGTAATCTCTGGC 60.340 52.381 3.32 0.00 38.28 4.85
2311 7911 2.359900 GTGGCCTTGTGTAATCTCTGG 58.640 52.381 3.32 0.00 0.00 3.86
2312 7912 2.290260 TGGTGGCCTTGTGTAATCTCTG 60.290 50.000 3.32 0.00 0.00 3.35
2313 7913 1.985159 TGGTGGCCTTGTGTAATCTCT 59.015 47.619 3.32 0.00 0.00 3.10
2314 7914 2.489938 TGGTGGCCTTGTGTAATCTC 57.510 50.000 3.32 0.00 0.00 2.75
2315 7915 2.969821 TTGGTGGCCTTGTGTAATCT 57.030 45.000 3.32 0.00 0.00 2.40
2316 7916 3.068873 TGTTTTGGTGGCCTTGTGTAATC 59.931 43.478 3.32 0.00 0.00 1.75
2317 7917 3.034635 TGTTTTGGTGGCCTTGTGTAAT 58.965 40.909 3.32 0.00 0.00 1.89
2318 7918 2.457598 TGTTTTGGTGGCCTTGTGTAA 58.542 42.857 3.32 0.00 0.00 2.41
2319 7919 2.145397 TGTTTTGGTGGCCTTGTGTA 57.855 45.000 3.32 0.00 0.00 2.90
2320 7920 1.066502 GTTGTTTTGGTGGCCTTGTGT 60.067 47.619 3.32 0.00 0.00 3.72
2321 7921 1.650825 GTTGTTTTGGTGGCCTTGTG 58.349 50.000 3.32 0.00 0.00 3.33
2322 7922 0.539518 GGTTGTTTTGGTGGCCTTGT 59.460 50.000 3.32 0.00 0.00 3.16
2323 7923 0.539051 TGGTTGTTTTGGTGGCCTTG 59.461 50.000 3.32 0.00 0.00 3.61
2324 7924 1.065782 GTTGGTTGTTTTGGTGGCCTT 60.066 47.619 3.32 0.00 0.00 4.35
2325 7925 0.539518 GTTGGTTGTTTTGGTGGCCT 59.460 50.000 3.32 0.00 0.00 5.19
2326 7926 0.539518 AGTTGGTTGTTTTGGTGGCC 59.460 50.000 0.00 0.00 0.00 5.36
2327 7927 1.205893 TCAGTTGGTTGTTTTGGTGGC 59.794 47.619 0.00 0.00 0.00 5.01
2328 7928 3.258228 GTTCAGTTGGTTGTTTTGGTGG 58.742 45.455 0.00 0.00 0.00 4.61
2329 7929 3.677596 GTGTTCAGTTGGTTGTTTTGGTG 59.322 43.478 0.00 0.00 0.00 4.17
2330 7930 3.322254 TGTGTTCAGTTGGTTGTTTTGGT 59.678 39.130 0.00 0.00 0.00 3.67
2331 7931 3.919216 TGTGTTCAGTTGGTTGTTTTGG 58.081 40.909 0.00 0.00 0.00 3.28
2332 7932 5.914085 TTTGTGTTCAGTTGGTTGTTTTG 57.086 34.783 0.00 0.00 0.00 2.44
2333 7933 6.927294 TTTTTGTGTTCAGTTGGTTGTTTT 57.073 29.167 0.00 0.00 0.00 2.43
2353 7953 9.940166 CGTGTACCTGTAGTTTATTTTCTTTTT 57.060 29.630 0.00 0.00 0.00 1.94
2354 7954 8.562052 CCGTGTACCTGTAGTTTATTTTCTTTT 58.438 33.333 0.00 0.00 0.00 2.27
2355 7955 7.716560 ACCGTGTACCTGTAGTTTATTTTCTTT 59.283 33.333 0.00 0.00 0.00 2.52
2356 7956 7.172019 CACCGTGTACCTGTAGTTTATTTTCTT 59.828 37.037 0.00 0.00 0.00 2.52
2357 7957 6.647895 CACCGTGTACCTGTAGTTTATTTTCT 59.352 38.462 0.00 0.00 0.00 2.52
2358 7958 6.646240 TCACCGTGTACCTGTAGTTTATTTTC 59.354 38.462 0.00 0.00 0.00 2.29
2359 7959 6.523840 TCACCGTGTACCTGTAGTTTATTTT 58.476 36.000 0.00 0.00 0.00 1.82
2360 7960 6.100404 TCACCGTGTACCTGTAGTTTATTT 57.900 37.500 0.00 0.00 0.00 1.40
2361 7961 5.726980 TCACCGTGTACCTGTAGTTTATT 57.273 39.130 0.00 0.00 0.00 1.40
2362 7962 5.657474 CATCACCGTGTACCTGTAGTTTAT 58.343 41.667 0.00 0.00 0.00 1.40
2363 7963 4.618927 GCATCACCGTGTACCTGTAGTTTA 60.619 45.833 0.00 0.00 0.00 2.01
2364 7964 3.863400 GCATCACCGTGTACCTGTAGTTT 60.863 47.826 0.00 0.00 0.00 2.66
2365 7965 2.353406 GCATCACCGTGTACCTGTAGTT 60.353 50.000 0.00 0.00 0.00 2.24
2366 7966 1.203994 GCATCACCGTGTACCTGTAGT 59.796 52.381 0.00 0.00 0.00 2.73
2367 7967 1.470979 GGCATCACCGTGTACCTGTAG 60.471 57.143 0.00 0.00 0.00 2.74
2368 7968 0.533491 GGCATCACCGTGTACCTGTA 59.467 55.000 0.00 0.00 0.00 2.74
2369 7969 1.295423 GGCATCACCGTGTACCTGT 59.705 57.895 0.00 0.00 0.00 4.00
2370 7970 4.201951 GGCATCACCGTGTACCTG 57.798 61.111 0.00 0.00 0.00 4.00
2395 7995 4.084537 CGTGTAGTCTTTGGTGCTTGTAAG 60.085 45.833 0.00 0.00 0.00 2.34
2396 7996 3.805422 CGTGTAGTCTTTGGTGCTTGTAA 59.195 43.478 0.00 0.00 0.00 2.41
2397 7997 3.386486 CGTGTAGTCTTTGGTGCTTGTA 58.614 45.455 0.00 0.00 0.00 2.41
2398 7998 2.210116 CGTGTAGTCTTTGGTGCTTGT 58.790 47.619 0.00 0.00 0.00 3.16
2399 7999 1.069906 GCGTGTAGTCTTTGGTGCTTG 60.070 52.381 0.00 0.00 0.00 4.01
2400 8000 1.226746 GCGTGTAGTCTTTGGTGCTT 58.773 50.000 0.00 0.00 0.00 3.91
2401 8001 0.602905 GGCGTGTAGTCTTTGGTGCT 60.603 55.000 0.00 0.00 0.00 4.40
2402 8002 1.574702 GGGCGTGTAGTCTTTGGTGC 61.575 60.000 0.00 0.00 0.00 5.01
2403 8003 0.034896 AGGGCGTGTAGTCTTTGGTG 59.965 55.000 0.00 0.00 0.00 4.17
2404 8004 1.636148 TAGGGCGTGTAGTCTTTGGT 58.364 50.000 0.00 0.00 0.00 3.67
2405 8005 2.981859 ATAGGGCGTGTAGTCTTTGG 57.018 50.000 0.00 0.00 0.00 3.28
2406 8006 4.913335 TCTATAGGGCGTGTAGTCTTTG 57.087 45.455 10.18 0.00 0.00 2.77
2407 8007 4.954826 ACTTCTATAGGGCGTGTAGTCTTT 59.045 41.667 10.18 0.00 0.00 2.52
2408 8008 4.534797 ACTTCTATAGGGCGTGTAGTCTT 58.465 43.478 10.18 0.00 0.00 3.01
2409 8009 4.167652 ACTTCTATAGGGCGTGTAGTCT 57.832 45.455 10.18 0.00 0.00 3.24
2410 8010 6.183360 TGTTTACTTCTATAGGGCGTGTAGTC 60.183 42.308 10.18 0.00 0.00 2.59
2411 8011 5.653769 TGTTTACTTCTATAGGGCGTGTAGT 59.346 40.000 10.18 0.00 0.00 2.73
2412 8012 6.140303 TGTTTACTTCTATAGGGCGTGTAG 57.860 41.667 4.79 4.79 0.00 2.74
2413 8013 6.720112 ATGTTTACTTCTATAGGGCGTGTA 57.280 37.500 0.00 0.00 0.00 2.90
2414 8014 5.609533 ATGTTTACTTCTATAGGGCGTGT 57.390 39.130 0.00 0.00 0.00 4.49
2415 8015 9.701098 TTATTATGTTTACTTCTATAGGGCGTG 57.299 33.333 0.00 0.00 0.00 5.34
2416 8016 9.924650 CTTATTATGTTTACTTCTATAGGGCGT 57.075 33.333 0.00 0.00 0.00 5.68
2417 8017 8.870879 GCTTATTATGTTTACTTCTATAGGGCG 58.129 37.037 0.00 0.00 0.00 6.13
2418 8018 9.720769 TGCTTATTATGTTTACTTCTATAGGGC 57.279 33.333 0.00 0.00 0.00 5.19
2425 8025 9.838339 ATGCTAGTGCTTATTATGTTTACTTCT 57.162 29.630 0.00 0.00 40.48 2.85
2426 8026 9.869844 CATGCTAGTGCTTATTATGTTTACTTC 57.130 33.333 0.00 0.00 40.48 3.01
2427 8027 9.613428 TCATGCTAGTGCTTATTATGTTTACTT 57.387 29.630 0.00 0.00 40.48 2.24
2428 8028 9.613428 TTCATGCTAGTGCTTATTATGTTTACT 57.387 29.630 0.00 0.00 40.48 2.24
2429 8029 9.869844 CTTCATGCTAGTGCTTATTATGTTTAC 57.130 33.333 0.00 0.00 40.48 2.01
2430 8030 9.613428 ACTTCATGCTAGTGCTTATTATGTTTA 57.387 29.630 0.20 0.00 40.48 2.01
2431 8031 8.511604 ACTTCATGCTAGTGCTTATTATGTTT 57.488 30.769 0.20 0.00 40.48 2.83
2432 8032 7.770433 TGACTTCATGCTAGTGCTTATTATGTT 59.230 33.333 5.21 0.00 40.48 2.71
2433 8033 7.275183 TGACTTCATGCTAGTGCTTATTATGT 58.725 34.615 5.21 0.00 40.48 2.29
2434 8034 7.719778 TGACTTCATGCTAGTGCTTATTATG 57.280 36.000 5.21 0.00 40.48 1.90
2435 8035 7.042456 CGTTGACTTCATGCTAGTGCTTATTAT 60.042 37.037 5.21 0.00 40.48 1.28
2436 8036 6.255670 CGTTGACTTCATGCTAGTGCTTATTA 59.744 38.462 5.21 0.00 40.48 0.98
2437 8037 5.063944 CGTTGACTTCATGCTAGTGCTTATT 59.936 40.000 5.21 0.00 40.48 1.40
2438 8038 4.568359 CGTTGACTTCATGCTAGTGCTTAT 59.432 41.667 5.21 0.00 40.48 1.73
2439 8039 3.926527 CGTTGACTTCATGCTAGTGCTTA 59.073 43.478 5.21 0.00 40.48 3.09
2440 8040 2.738846 CGTTGACTTCATGCTAGTGCTT 59.261 45.455 5.21 0.00 40.48 3.91
2441 8041 2.341257 CGTTGACTTCATGCTAGTGCT 58.659 47.619 5.21 0.00 40.48 4.40
2442 8042 1.394917 CCGTTGACTTCATGCTAGTGC 59.605 52.381 5.21 0.00 40.20 4.40
2443 8043 2.926200 CTCCGTTGACTTCATGCTAGTG 59.074 50.000 5.21 0.00 0.00 2.74
2444 8044 2.563179 ACTCCGTTGACTTCATGCTAGT 59.437 45.455 0.56 0.56 0.00 2.57
2445 8045 3.182967 GACTCCGTTGACTTCATGCTAG 58.817 50.000 0.00 0.00 0.00 3.42
2446 8046 2.094182 GGACTCCGTTGACTTCATGCTA 60.094 50.000 0.00 0.00 0.00 3.49
2447 8047 1.338200 GGACTCCGTTGACTTCATGCT 60.338 52.381 0.00 0.00 0.00 3.79
2448 8048 1.079503 GGACTCCGTTGACTTCATGC 58.920 55.000 0.00 0.00 0.00 4.06
2449 8049 2.751166 AGGACTCCGTTGACTTCATG 57.249 50.000 0.00 0.00 0.00 3.07
2450 8050 2.632996 TGAAGGACTCCGTTGACTTCAT 59.367 45.455 0.00 0.00 41.63 2.57
2451 8051 2.036387 TGAAGGACTCCGTTGACTTCA 58.964 47.619 0.00 0.00 43.54 3.02
2452 8052 2.814280 TGAAGGACTCCGTTGACTTC 57.186 50.000 0.00 0.00 38.36 3.01
2453 8053 2.434702 ACTTGAAGGACTCCGTTGACTT 59.565 45.455 0.00 0.00 0.00 3.01
2454 8054 2.040178 ACTTGAAGGACTCCGTTGACT 58.960 47.619 0.00 0.00 0.00 3.41
2455 8055 2.135933 CACTTGAAGGACTCCGTTGAC 58.864 52.381 0.00 0.00 0.00 3.18
2456 8056 2.036387 TCACTTGAAGGACTCCGTTGA 58.964 47.619 0.00 0.00 0.00 3.18
2457 8057 2.526304 TCACTTGAAGGACTCCGTTG 57.474 50.000 0.00 0.00 0.00 4.10
2458 8058 2.434702 AGTTCACTTGAAGGACTCCGTT 59.565 45.455 0.00 0.00 34.27 4.44
2459 8059 2.040178 AGTTCACTTGAAGGACTCCGT 58.960 47.619 0.00 0.00 34.27 4.69
2460 8060 2.821991 AGTTCACTTGAAGGACTCCG 57.178 50.000 0.00 0.00 34.27 4.63
2461 8061 5.612351 ACTAAAGTTCACTTGAAGGACTCC 58.388 41.667 0.00 0.00 36.12 3.85
2462 8062 6.281405 TGACTAAAGTTCACTTGAAGGACTC 58.719 40.000 0.00 0.00 36.12 3.36
2463 8063 6.127026 ACTGACTAAAGTTCACTTGAAGGACT 60.127 38.462 0.00 0.00 36.12 3.85
2464 8064 6.049790 ACTGACTAAAGTTCACTTGAAGGAC 58.950 40.000 0.00 0.00 36.12 3.85
2465 8065 6.235231 ACTGACTAAAGTTCACTTGAAGGA 57.765 37.500 0.00 0.00 36.12 3.36
2466 8066 6.647067 CCTACTGACTAAAGTTCACTTGAAGG 59.353 42.308 0.00 0.00 36.12 3.46
2467 8067 7.382759 GTCCTACTGACTAAAGTTCACTTGAAG 59.617 40.741 0.00 0.00 41.03 3.02
2468 8068 7.147794 TGTCCTACTGACTAAAGTTCACTTGAA 60.148 37.037 0.00 0.00 44.75 2.69
2469 8069 6.322969 TGTCCTACTGACTAAAGTTCACTTGA 59.677 38.462 0.00 0.00 44.75 3.02
2470 8070 6.513180 TGTCCTACTGACTAAAGTTCACTTG 58.487 40.000 0.00 0.00 44.75 3.16
2471 8071 6.726490 TGTCCTACTGACTAAAGTTCACTT 57.274 37.500 0.00 0.00 44.75 3.16
2472 8072 6.726490 TTGTCCTACTGACTAAAGTTCACT 57.274 37.500 0.00 0.00 44.75 3.41
2473 8073 6.759827 TGTTTGTCCTACTGACTAAAGTTCAC 59.240 38.462 0.00 0.00 44.75 3.18
2474 8074 6.880484 TGTTTGTCCTACTGACTAAAGTTCA 58.120 36.000 0.00 0.00 44.75 3.18
2475 8075 7.208080 TCTGTTTGTCCTACTGACTAAAGTTC 58.792 38.462 0.00 0.00 44.75 3.01
2476 8076 7.120923 TCTGTTTGTCCTACTGACTAAAGTT 57.879 36.000 0.00 0.00 44.75 2.66
2477 8077 6.239345 CCTCTGTTTGTCCTACTGACTAAAGT 60.239 42.308 0.00 0.00 44.75 2.66
2478 8078 6.159988 CCTCTGTTTGTCCTACTGACTAAAG 58.840 44.000 0.00 0.00 44.75 1.85
2479 8079 5.011738 CCCTCTGTTTGTCCTACTGACTAAA 59.988 44.000 0.00 0.00 44.75 1.85
2480 8080 4.527038 CCCTCTGTTTGTCCTACTGACTAA 59.473 45.833 0.00 0.00 44.75 2.24
2481 8081 4.087182 CCCTCTGTTTGTCCTACTGACTA 58.913 47.826 0.00 0.00 44.75 2.59
2482 8082 2.900546 CCCTCTGTTTGTCCTACTGACT 59.099 50.000 0.00 0.00 44.75 3.41
2483 8083 2.028020 CCCCTCTGTTTGTCCTACTGAC 60.028 54.545 0.00 0.00 44.72 3.51
2484 8084 2.158219 TCCCCTCTGTTTGTCCTACTGA 60.158 50.000 0.00 0.00 0.00 3.41
2485 8085 2.257207 TCCCCTCTGTTTGTCCTACTG 58.743 52.381 0.00 0.00 0.00 2.74
2486 8086 2.638363 GTTCCCCTCTGTTTGTCCTACT 59.362 50.000 0.00 0.00 0.00 2.57
2487 8087 2.638363 AGTTCCCCTCTGTTTGTCCTAC 59.362 50.000 0.00 0.00 0.00 3.18
2488 8088 2.986050 AGTTCCCCTCTGTTTGTCCTA 58.014 47.619 0.00 0.00 0.00 2.94
2489 8089 1.821088 AGTTCCCCTCTGTTTGTCCT 58.179 50.000 0.00 0.00 0.00 3.85
2490 8090 2.505405 GAAGTTCCCCTCTGTTTGTCC 58.495 52.381 0.00 0.00 0.00 4.02
2491 8091 2.143925 CGAAGTTCCCCTCTGTTTGTC 58.856 52.381 0.00 0.00 0.00 3.18
2492 8092 1.202770 CCGAAGTTCCCCTCTGTTTGT 60.203 52.381 0.00 0.00 0.00 2.83
2493 8093 1.523758 CCGAAGTTCCCCTCTGTTTG 58.476 55.000 0.00 0.00 0.00 2.93
2494 8094 0.400594 CCCGAAGTTCCCCTCTGTTT 59.599 55.000 0.00 0.00 0.00 2.83
2495 8095 2.067197 CCCGAAGTTCCCCTCTGTT 58.933 57.895 0.00 0.00 0.00 3.16
2496 8096 2.593956 GCCCGAAGTTCCCCTCTGT 61.594 63.158 0.00 0.00 0.00 3.41
2497 8097 2.269241 GCCCGAAGTTCCCCTCTG 59.731 66.667 0.00 0.00 0.00 3.35
2498 8098 3.391382 CGCCCGAAGTTCCCCTCT 61.391 66.667 0.00 0.00 0.00 3.69
2499 8099 4.468689 CCGCCCGAAGTTCCCCTC 62.469 72.222 0.00 0.00 0.00 4.30
2501 8101 4.468689 CTCCGCCCGAAGTTCCCC 62.469 72.222 0.00 0.00 0.00 4.81
2513 8113 4.133796 GTTGGGCAATGGCTCCGC 62.134 66.667 6.78 0.00 40.96 5.54
2514 8114 3.814268 CGTTGGGCAATGGCTCCG 61.814 66.667 6.78 2.97 40.96 4.63
2515 8115 2.676471 ACGTTGGGCAATGGCTCC 60.676 61.111 6.78 0.00 40.96 4.70
2516 8116 2.877691 GACGTTGGGCAATGGCTC 59.122 61.111 6.78 0.00 42.48 4.70
2517 8117 2.819984 ATCGACGTTGGGCAATGGCT 62.820 55.000 6.78 0.00 40.87 4.75
2518 8118 2.406616 ATCGACGTTGGGCAATGGC 61.407 57.895 2.20 0.00 40.13 4.40
2519 8119 1.429021 CATCGACGTTGGGCAATGG 59.571 57.895 2.20 0.00 0.00 3.16
2520 8120 1.024046 TCCATCGACGTTGGGCAATG 61.024 55.000 21.69 4.55 34.85 2.82
2521 8121 1.024579 GTCCATCGACGTTGGGCAAT 61.025 55.000 21.65 0.00 38.76 3.56
2522 8122 1.669760 GTCCATCGACGTTGGGCAA 60.670 57.895 21.65 3.08 38.76 4.52
2523 8123 2.047655 GTCCATCGACGTTGGGCA 60.048 61.111 21.65 3.76 38.76 5.36
2524 8124 2.818274 GGTCCATCGACGTTGGGC 60.818 66.667 21.69 20.42 40.17 5.36
2525 8125 2.508439 CGGTCCATCGACGTTGGG 60.508 66.667 21.69 9.87 40.17 4.12
2526 8126 1.516386 CTCGGTCCATCGACGTTGG 60.516 63.158 17.21 17.21 40.17 3.77
2527 8127 2.158959 GCTCGGTCCATCGACGTTG 61.159 63.158 0.00 0.00 40.17 4.10
2528 8128 2.181021 GCTCGGTCCATCGACGTT 59.819 61.111 0.00 0.00 40.17 3.99
2529 8129 3.823330 GGCTCGGTCCATCGACGT 61.823 66.667 0.00 0.00 40.17 4.34
2530 8130 4.570663 GGGCTCGGTCCATCGACG 62.571 72.222 0.00 0.00 40.17 5.12
2531 8131 3.140225 GAGGGCTCGGTCCATCGAC 62.140 68.421 0.00 0.00 38.38 4.20
2532 8132 2.833582 GAGGGCTCGGTCCATCGA 60.834 66.667 0.00 0.00 37.60 3.59
2533 8133 2.427540 GATGAGGGCTCGGTCCATCG 62.428 65.000 4.58 0.00 39.62 3.84
2534 8134 1.118356 AGATGAGGGCTCGGTCCATC 61.118 60.000 0.00 0.00 37.43 3.51
2535 8135 0.188587 TAGATGAGGGCTCGGTCCAT 59.811 55.000 0.00 0.00 0.00 3.41
2536 8136 0.755698 GTAGATGAGGGCTCGGTCCA 60.756 60.000 0.00 0.00 0.00 4.02
2537 8137 1.465200 GGTAGATGAGGGCTCGGTCC 61.465 65.000 0.00 0.00 0.00 4.46
2538 8138 1.465200 GGGTAGATGAGGGCTCGGTC 61.465 65.000 0.00 0.00 0.00 4.79
2539 8139 1.457831 GGGTAGATGAGGGCTCGGT 60.458 63.158 0.00 0.00 0.00 4.69
2540 8140 1.152440 AGGGTAGATGAGGGCTCGG 60.152 63.158 0.00 0.00 0.00 4.63
2541 8141 1.467678 CCAGGGTAGATGAGGGCTCG 61.468 65.000 0.00 0.00 0.00 5.03
2542 8142 0.105453 TCCAGGGTAGATGAGGGCTC 60.105 60.000 0.00 0.00 0.00 4.70
2543 8143 0.343372 TTCCAGGGTAGATGAGGGCT 59.657 55.000 0.00 0.00 0.00 5.19
2544 8144 0.761802 CTTCCAGGGTAGATGAGGGC 59.238 60.000 0.00 0.00 0.00 5.19
2545 8145 1.344496 ACCTTCCAGGGTAGATGAGGG 60.344 57.143 0.00 0.00 40.58 4.30
2546 8146 1.765314 CACCTTCCAGGGTAGATGAGG 59.235 57.143 0.00 0.00 40.58 3.86
2547 8147 2.472029 ACACCTTCCAGGGTAGATGAG 58.528 52.381 0.00 0.00 40.58 2.90
2548 8148 2.642171 ACACCTTCCAGGGTAGATGA 57.358 50.000 0.00 0.00 40.58 2.92
2549 8149 3.104512 TGTACACCTTCCAGGGTAGATG 58.895 50.000 0.00 0.00 40.58 2.90
2550 8150 3.484953 TGTACACCTTCCAGGGTAGAT 57.515 47.619 0.00 0.00 40.58 1.98
2551 8151 3.371965 GATGTACACCTTCCAGGGTAGA 58.628 50.000 0.00 0.00 40.58 2.59
2552 8152 2.100916 CGATGTACACCTTCCAGGGTAG 59.899 54.545 0.00 0.00 40.58 3.18
2553 8153 2.104967 CGATGTACACCTTCCAGGGTA 58.895 52.381 0.00 0.00 40.58 3.69
2554 8154 0.902531 CGATGTACACCTTCCAGGGT 59.097 55.000 0.00 0.00 40.58 4.34
2555 8155 1.191535 TCGATGTACACCTTCCAGGG 58.808 55.000 0.00 0.00 40.58 4.45
2556 8156 3.000727 GTTTCGATGTACACCTTCCAGG 58.999 50.000 0.00 0.00 42.49 4.45
2557 8157 3.000727 GGTTTCGATGTACACCTTCCAG 58.999 50.000 0.00 0.00 0.00 3.86
2558 8158 2.369203 TGGTTTCGATGTACACCTTCCA 59.631 45.455 0.00 0.00 0.00 3.53
2559 8159 3.048337 TGGTTTCGATGTACACCTTCC 57.952 47.619 0.00 0.00 0.00 3.46
2560 8160 3.181510 GCATGGTTTCGATGTACACCTTC 60.182 47.826 0.00 0.00 0.00 3.46
2561 8161 2.747446 GCATGGTTTCGATGTACACCTT 59.253 45.455 0.00 0.00 0.00 3.50
2562 8162 2.027192 AGCATGGTTTCGATGTACACCT 60.027 45.455 0.00 0.00 0.00 4.00
2563 8163 2.095853 CAGCATGGTTTCGATGTACACC 59.904 50.000 0.00 0.00 0.00 4.16
2564 8164 2.476185 GCAGCATGGTTTCGATGTACAC 60.476 50.000 0.00 0.00 35.86 2.90
2565 8165 1.737236 GCAGCATGGTTTCGATGTACA 59.263 47.619 0.00 0.00 35.86 2.90
2566 8166 2.458592 GCAGCATGGTTTCGATGTAC 57.541 50.000 0.00 0.00 35.86 2.90
2577 8177 0.034767 TTTGGAGAGGAGCAGCATGG 60.035 55.000 0.00 0.00 35.86 3.66
2578 8178 1.948145 GATTTGGAGAGGAGCAGCATG 59.052 52.381 0.00 0.00 40.87 4.06
2579 8179 1.133853 GGATTTGGAGAGGAGCAGCAT 60.134 52.381 0.00 0.00 0.00 3.79
2580 8180 0.254178 GGATTTGGAGAGGAGCAGCA 59.746 55.000 0.00 0.00 0.00 4.41
2581 8181 0.813210 CGGATTTGGAGAGGAGCAGC 60.813 60.000 0.00 0.00 0.00 5.25
2582 8182 0.179062 CCGGATTTGGAGAGGAGCAG 60.179 60.000 0.00 0.00 0.00 4.24
2583 8183 0.617535 TCCGGATTTGGAGAGGAGCA 60.618 55.000 0.00 0.00 33.05 4.26
2584 8184 2.212327 TCCGGATTTGGAGAGGAGC 58.788 57.895 0.00 0.00 33.05 4.70
2591 8191 1.999002 GGTCCCCTCCGGATTTGGA 60.999 63.158 3.57 8.76 44.66 3.53
2592 8192 2.595655 GGTCCCCTCCGGATTTGG 59.404 66.667 3.57 6.12 44.66 3.28
2593 8193 2.595655 GGGTCCCCTCCGGATTTG 59.404 66.667 3.57 0.00 44.66 2.32
2594 8194 2.694992 GGGGTCCCCTCCGGATTT 60.695 66.667 21.13 0.00 44.66 2.17
2621 8221 3.804193 GCGCCTTTCGAGCCAAGG 61.804 66.667 9.61 9.61 43.47 3.61
2640 8240 2.325393 ATTCCATCTTCCGGCGGTCC 62.325 60.000 27.32 0.00 0.00 4.46
2641 8241 0.463833 AATTCCATCTTCCGGCGGTC 60.464 55.000 27.32 0.00 0.00 4.79
2642 8242 0.748005 CAATTCCATCTTCCGGCGGT 60.748 55.000 27.32 2.65 0.00 5.68
2643 8243 2.024918 CAATTCCATCTTCCGGCGG 58.975 57.895 22.51 22.51 0.00 6.13
2644 8244 1.356624 GCAATTCCATCTTCCGGCG 59.643 57.895 0.00 0.00 0.00 6.46
2645 8245 1.735973 GGCAATTCCATCTTCCGGC 59.264 57.895 0.00 0.00 34.01 6.13
2646 8246 0.106519 AGGGCAATTCCATCTTCCGG 60.107 55.000 0.00 0.00 36.21 5.14
2647 8247 1.312815 GAGGGCAATTCCATCTTCCG 58.687 55.000 2.56 0.00 42.21 4.30
2648 8248 1.697284 GGAGGGCAATTCCATCTTCC 58.303 55.000 8.00 0.00 44.75 3.46
2649 8249 1.216427 AGGGAGGGCAATTCCATCTTC 59.784 52.381 8.00 3.23 44.75 2.87
2650 8250 1.312884 AGGGAGGGCAATTCCATCTT 58.687 50.000 8.00 0.00 44.75 2.40
2651 8251 2.061061 CTAGGGAGGGCAATTCCATCT 58.939 52.381 8.00 0.00 44.75 2.90
2652 8252 2.039613 CTCTAGGGAGGGCAATTCCATC 59.960 54.545 4.64 1.43 44.65 3.51
2653 8253 2.061061 CTCTAGGGAGGGCAATTCCAT 58.939 52.381 4.64 0.26 36.40 3.41
2654 8254 1.511613 CTCTAGGGAGGGCAATTCCA 58.488 55.000 4.64 0.00 36.40 3.53
2662 8262 1.488393 CTTTCCTTGCTCTAGGGAGGG 59.512 57.143 0.00 0.00 39.80 4.30
2663 8263 1.488393 CCTTTCCTTGCTCTAGGGAGG 59.512 57.143 0.00 0.00 39.80 4.30
2664 8264 2.998316 CCTTTCCTTGCTCTAGGGAG 57.002 55.000 0.00 0.00 42.18 4.30
2666 8266 0.106967 GCCCTTTCCTTGCTCTAGGG 60.107 60.000 0.00 0.00 46.82 3.53
2667 8267 0.620556 TGCCCTTTCCTTGCTCTAGG 59.379 55.000 0.00 0.00 36.59 3.02
2668 8268 2.092753 TCATGCCCTTTCCTTGCTCTAG 60.093 50.000 0.00 0.00 0.00 2.43
2669 8269 1.915489 TCATGCCCTTTCCTTGCTCTA 59.085 47.619 0.00 0.00 0.00 2.43
2670 8270 0.700564 TCATGCCCTTTCCTTGCTCT 59.299 50.000 0.00 0.00 0.00 4.09
2671 8271 1.772836 ATCATGCCCTTTCCTTGCTC 58.227 50.000 0.00 0.00 0.00 4.26
2672 8272 2.105766 GAATCATGCCCTTTCCTTGCT 58.894 47.619 0.00 0.00 0.00 3.91
2673 8273 2.105766 AGAATCATGCCCTTTCCTTGC 58.894 47.619 0.00 0.00 0.00 4.01
2674 8274 2.429610 CCAGAATCATGCCCTTTCCTTG 59.570 50.000 0.00 0.00 0.00 3.61
2675 8275 2.743553 CCAGAATCATGCCCTTTCCTT 58.256 47.619 0.00 0.00 0.00 3.36
2676 8276 2.449137 CCAGAATCATGCCCTTTCCT 57.551 50.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.