Multiple sequence alignment - TraesCS5B01G045600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G045600 chr5B 100.000 3671 0 0 1 3671 50934177 50930507 0.000000e+00 6780.0
1 TraesCS5B01G045600 chr5B 96.046 1821 45 11 832 2629 50643203 50645019 0.000000e+00 2939.0
2 TraesCS5B01G045600 chr5B 95.089 1242 48 8 1394 2629 38355252 38356486 0.000000e+00 1943.0
3 TraesCS5B01G045600 chr5B 96.497 942 27 4 2709 3647 50645186 50646124 0.000000e+00 1552.0
4 TraesCS5B01G045600 chr5B 86.472 961 87 26 2709 3647 663518237 663519176 0.000000e+00 1014.0
5 TraesCS5B01G045600 chr5B 85.952 961 87 31 2709 3647 555949464 555948530 0.000000e+00 983.0
6 TraesCS5B01G045600 chr5B 85.352 355 27 15 1010 1355 38354917 38355255 9.760000e-91 344.0
7 TraesCS5B01G045600 chr5B 90.608 181 17 0 2725 2905 38358553 38358733 1.320000e-59 241.0
8 TraesCS5B01G045600 chr5B 87.681 138 13 3 2958 3094 38356823 38356957 1.360000e-34 158.0
9 TraesCS5B01G045600 chr5B 97.590 83 2 0 2627 2709 50645065 50645147 3.820000e-30 143.0
10 TraesCS5B01G045600 chr5B 86.667 120 9 4 1 113 50642979 50643098 3.850000e-25 126.0
11 TraesCS5B01G045600 chr5B 94.118 51 3 0 2649 2699 555949576 555949526 1.090000e-10 78.7
12 TraesCS5B01G045600 chr5B 95.745 47 2 0 2649 2695 663518125 663518171 3.930000e-10 76.8
13 TraesCS5B01G045600 chr5D 94.731 1765 39 16 865 2587 48449069 48450821 0.000000e+00 2695.0
14 TraesCS5B01G045600 chr5D 95.068 1703 37 19 923 2587 48049181 48047488 0.000000e+00 2636.0
15 TraesCS5B01G045600 chr5D 94.515 948 25 5 2709 3647 48451054 48451983 0.000000e+00 1437.0
16 TraesCS5B01G045600 chr5D 87.927 936 70 20 1009 1938 42874864 42873966 0.000000e+00 1062.0
17 TraesCS5B01G045600 chr5D 86.681 961 85 27 2709 3647 521254435 521255374 0.000000e+00 1026.0
18 TraesCS5B01G045600 chr5D 91.217 649 38 11 1939 2579 42867029 42866392 0.000000e+00 865.0
19 TraesCS5B01G045600 chr5D 93.135 437 20 6 3021 3454 48046989 48046560 1.860000e-177 632.0
20 TraesCS5B01G045600 chr5D 88.406 483 39 3 3187 3653 42867997 42867516 1.910000e-157 566.0
21 TraesCS5B01G045600 chr5D 96.310 271 6 2 2690 2960 48047264 48046998 3.360000e-120 442.0
22 TraesCS5B01G045600 chr5D 91.923 260 19 1 1 260 48049460 48049203 2.690000e-96 363.0
23 TraesCS5B01G045600 chr5D 91.870 246 20 0 2709 2954 42806584 42806339 9.760000e-91 344.0
24 TraesCS5B01G045600 chr5D 83.636 385 32 15 2709 3086 42868599 42868239 2.110000e-87 333.0
25 TraesCS5B01G045600 chr5D 92.857 140 8 1 1 140 48448437 48448574 6.220000e-48 202.0
26 TraesCS5B01G045600 chr5D 95.050 101 4 1 3401 3501 48453487 48453586 1.360000e-34 158.0
27 TraesCS5B01G045600 chr5D 100.000 83 0 0 2627 2709 48047382 48047300 1.770000e-33 154.0
28 TraesCS5B01G045600 chr5D 80.365 219 27 11 3283 3500 48044206 48044003 6.350000e-33 152.0
29 TraesCS5B01G045600 chr5D 96.341 82 2 1 3017 3097 42806328 42806247 2.300000e-27 134.0
30 TraesCS5B01G045600 chr5D 91.011 89 2 1 2627 2709 48450925 48451013 8.330000e-22 115.0
31 TraesCS5B01G045600 chr5D 100.000 47 0 0 2583 2629 48047474 48047428 1.820000e-13 87.9
32 TraesCS5B01G045600 chr5D 100.000 47 0 0 2583 2629 48450835 48450881 1.820000e-13 87.9
33 TraesCS5B01G045600 chr5D 94.118 51 3 0 2649 2699 521254323 521254373 1.090000e-10 78.7
34 TraesCS5B01G045600 chr5A 95.721 1262 27 17 1352 2586 38017536 38016275 0.000000e+00 2006.0
35 TraesCS5B01G045600 chr5A 93.454 1161 47 6 1476 2629 31267258 31268396 0.000000e+00 1696.0
36 TraesCS5B01G045600 chr5A 95.661 1037 35 4 1600 2629 31219584 31218551 0.000000e+00 1657.0
37 TraesCS5B01G045600 chr5A 94.947 752 25 6 2709 3454 38016045 38015301 0.000000e+00 1166.0
38 TraesCS5B01G045600 chr5A 87.126 334 31 5 1061 1391 31266882 31267206 5.790000e-98 368.0
39 TraesCS5B01G045600 chr5A 86.895 351 14 10 838 1174 38017872 38017540 7.490000e-97 364.0
40 TraesCS5B01G045600 chr5A 90.909 253 18 2 1 250 38018353 38018103 5.870000e-88 335.0
41 TraesCS5B01G045600 chr5A 82.071 396 36 18 2709 3089 31218391 31218016 4.610000e-79 305.0
42 TraesCS5B01G045600 chr5A 82.071 396 36 18 2709 3089 31268556 31268931 4.610000e-79 305.0
43 TraesCS5B01G045600 chr5A 91.713 181 11 1 2725 2905 31271785 31271961 7.870000e-62 248.0
44 TraesCS5B01G045600 chr5A 87.273 165 17 2 2934 3094 31273107 31273271 6.260000e-43 185.0
45 TraesCS5B01G045600 chr5A 98.701 77 1 0 2633 2709 38016161 38016085 1.780000e-28 137.0
46 TraesCS5B01G045600 chr5A 97.872 47 1 0 2583 2629 38016260 38016214 8.450000e-12 82.4
47 TraesCS5B01G045600 chr5A 90.909 44 4 0 1443 1486 31267201 31267244 3.960000e-05 60.2
48 TraesCS5B01G045600 chr3D 89.025 1385 107 18 1213 2587 116076378 116077727 0.000000e+00 1674.0
49 TraesCS5B01G045600 chr3D 92.639 557 35 3 3095 3647 32389134 32388580 0.000000e+00 797.0
50 TraesCS5B01G045600 chr3D 94.298 228 10 1 261 485 586576121 586575894 2.710000e-91 346.0
51 TraesCS5B01G045600 chr3D 93.913 230 11 1 259 485 585091543 585091314 9.760000e-91 344.0
52 TraesCS5B01G045600 chr3D 94.000 50 3 0 2649 2698 32389631 32389582 3.930000e-10 76.8
53 TraesCS5B01G045600 chr1A 86.681 946 83 28 2709 3647 567965748 567964839 0.000000e+00 1009.0
54 TraesCS5B01G045600 chr1A 94.118 51 3 0 2649 2699 567965860 567965810 1.090000e-10 78.7
55 TraesCS5B01G045600 chr3B 88.038 836 73 9 1226 2055 169648131 169648945 0.000000e+00 965.0
56 TraesCS5B01G045600 chr6A 92.639 557 35 3 3095 3647 66267973 66268527 0.000000e+00 797.0
57 TraesCS5B01G045600 chr6A 93.939 231 11 1 258 485 556565494 556565724 2.710000e-91 346.0
58 TraesCS5B01G045600 chr6A 94.937 79 3 1 3017 3094 132972250 132972172 4.980000e-24 122.0
59 TraesCS5B01G045600 chr6A 94.118 51 3 0 2649 2699 66267483 66267533 1.090000e-10 78.7
60 TraesCS5B01G045600 chr4B 92.639 557 35 3 3095 3647 310971838 310972392 0.000000e+00 797.0
61 TraesCS5B01G045600 chr4B 93.160 307 20 1 483 789 655835193 655835498 2.010000e-122 449.0
62 TraesCS5B01G045600 chr1B 84.229 577 45 16 1280 1832 681696843 681696289 1.510000e-143 520.0
63 TraesCS5B01G045600 chr1B 93.160 307 20 1 483 789 42825290 42824985 2.010000e-122 449.0
64 TraesCS5B01G045600 chr1B 92.508 307 22 1 483 789 42932550 42932245 4.350000e-119 438.0
65 TraesCS5B01G045600 chr1B 92.508 307 22 1 483 789 364045160 364045465 4.350000e-119 438.0
66 TraesCS5B01G045600 chr7B 93.485 307 19 1 483 789 564286036 564286341 4.320000e-124 455.0
67 TraesCS5B01G045600 chr7B 93.624 298 19 0 481 778 516081201 516081498 2.600000e-121 446.0
68 TraesCS5B01G045600 chr7B 93.092 304 18 3 484 786 44545621 44545320 3.360000e-120 442.0
69 TraesCS5B01G045600 chr7B 93.333 45 3 0 2766 2810 595719243 595719199 2.370000e-07 67.6
70 TraesCS5B01G045600 chr2D 91.589 321 23 4 473 792 623696279 623695962 1.210000e-119 440.0
71 TraesCS5B01G045600 chr2B 92.508 307 21 2 483 789 614585169 614584865 4.350000e-119 438.0
72 TraesCS5B01G045600 chr2B 89.091 330 28 7 455 779 36196462 36196788 1.590000e-108 403.0
73 TraesCS5B01G045600 chr1D 89.720 321 26 7 460 778 490849934 490849619 1.590000e-108 403.0
74 TraesCS5B01G045600 chr1D 94.298 228 10 1 261 485 105249289 105249516 2.710000e-91 346.0
75 TraesCS5B01G045600 chr1D 93.913 230 11 1 259 485 203866480 203866251 9.760000e-91 344.0
76 TraesCS5B01G045600 chr7A 93.644 236 11 2 253 485 341621782 341621548 2.100000e-92 350.0
77 TraesCS5B01G045600 chr7A 93.902 82 4 1 3014 3094 72962034 72962115 4.980000e-24 122.0
78 TraesCS5B01G045600 chr7D 93.913 230 11 1 259 485 269985829 269986058 9.760000e-91 344.0
79 TraesCS5B01G045600 chr3A 92.797 236 13 2 253 485 199202358 199202124 4.540000e-89 339.0
80 TraesCS5B01G045600 chr2A 91.235 251 14 5 243 485 77695001 77695251 5.870000e-88 335.0
81 TraesCS5B01G045600 chr6B 83.942 274 40 4 426 697 78818680 78818409 3.640000e-65 259.0
82 TraesCS5B01G045600 chr4A 93.902 82 4 1 3014 3094 197481257 197481338 4.980000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G045600 chr5B 50930507 50934177 3670 True 6780.000000 6780 100.000000 1 3671 1 chr5B.!!$R1 3670
1 TraesCS5B01G045600 chr5B 50642979 50646124 3145 False 1190.000000 2939 94.200000 1 3647 4 chr5B.!!$F2 3646
2 TraesCS5B01G045600 chr5B 38354917 38358733 3816 False 671.500000 1943 89.682500 1010 3094 4 chr5B.!!$F1 2084
3 TraesCS5B01G045600 chr5B 663518125 663519176 1051 False 545.400000 1014 91.108500 2649 3647 2 chr5B.!!$F3 998
4 TraesCS5B01G045600 chr5B 555948530 555949576 1046 True 530.850000 983 90.035000 2649 3647 2 chr5B.!!$R2 998
5 TraesCS5B01G045600 chr5D 42873966 42874864 898 True 1062.000000 1062 87.927000 1009 1938 1 chr5D.!!$R1 929
6 TraesCS5B01G045600 chr5D 48448437 48453586 5149 False 782.483333 2695 94.694000 1 3647 6 chr5D.!!$F1 3646
7 TraesCS5B01G045600 chr5D 48044003 48049460 5457 True 638.128571 2636 93.828714 1 3500 7 chr5D.!!$R4 3499
8 TraesCS5B01G045600 chr5D 42866392 42868599 2207 True 588.000000 865 87.753000 1939 3653 3 chr5D.!!$R3 1714
9 TraesCS5B01G045600 chr5D 521254323 521255374 1051 False 552.350000 1026 90.399500 2649 3647 2 chr5D.!!$F2 998
10 TraesCS5B01G045600 chr5A 31218016 31219584 1568 True 981.000000 1657 88.866000 1600 3089 2 chr5A.!!$R1 1489
11 TraesCS5B01G045600 chr5A 38015301 38018353 3052 True 681.733333 2006 94.174167 1 3454 6 chr5A.!!$R2 3453
12 TraesCS5B01G045600 chr5A 31266882 31273271 6389 False 477.033333 1696 88.757667 1061 3094 6 chr5A.!!$F1 2033
13 TraesCS5B01G045600 chr3D 116076378 116077727 1349 False 1674.000000 1674 89.025000 1213 2587 1 chr3D.!!$F1 1374
14 TraesCS5B01G045600 chr3D 32388580 32389631 1051 True 436.900000 797 93.319500 2649 3647 2 chr3D.!!$R3 998
15 TraesCS5B01G045600 chr1A 567964839 567965860 1021 True 543.850000 1009 90.399500 2649 3647 2 chr1A.!!$R1 998
16 TraesCS5B01G045600 chr3B 169648131 169648945 814 False 965.000000 965 88.038000 1226 2055 1 chr3B.!!$F1 829
17 TraesCS5B01G045600 chr6A 66267483 66268527 1044 False 437.850000 797 93.378500 2649 3647 2 chr6A.!!$F2 998
18 TraesCS5B01G045600 chr4B 310971838 310972392 554 False 797.000000 797 92.639000 3095 3647 1 chr4B.!!$F1 552
19 TraesCS5B01G045600 chr1B 681696289 681696843 554 True 520.000000 520 84.229000 1280 1832 1 chr1B.!!$R3 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
537 1125 0.107643 TTGTGCACCGTGATCAAGGA 59.892 50.0 31.07 8.96 33.97 3.36 F
544 1132 0.179000 CCGTGATCAAGGAAGAGGGG 59.821 60.0 21.80 0.00 31.21 4.79 F
1087 1714 0.247460 CATGGCTCTCCGTCTTCACA 59.753 55.0 0.00 0.00 34.14 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2003 2700 1.376466 GTGAGGTGATGGTGGTGCT 59.624 57.895 0.0 0.00 0.0 4.40 R
2334 3044 2.505118 GTGACGACGAGGCTCTGC 60.505 66.667 13.5 3.17 0.0 4.26 R
2954 3918 2.422597 CAGTAAGTTTGTGGCATCGGA 58.577 47.619 0.0 0.00 0.0 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 117 3.340727 GCTTATGGCAGCAAGCTTG 57.659 52.632 22.44 22.44 43.07 4.01
127 133 1.134371 GCTTGGGTTGAGCTACTAGGG 60.134 57.143 0.00 0.00 37.18 3.53
142 510 1.409064 CTAGGGACTGCGCACTAATGA 59.591 52.381 5.66 0.00 41.52 2.57
162 530 1.227031 CATTTGCATTGGCGCGGAT 60.227 52.632 8.83 0.00 45.35 4.18
200 571 0.692419 AACTCGAGCCCTGGATCCAT 60.692 55.000 16.63 0.00 0.00 3.41
202 573 1.075301 TCGAGCCCTGGATCCATCA 60.075 57.895 16.63 0.00 0.00 3.07
224 595 4.986587 CGGTTGACGCCGTCGACA 62.987 66.667 32.11 9.46 45.79 4.35
255 843 1.606668 GACCCGCTTGTGTTCATTTCA 59.393 47.619 0.00 0.00 0.00 2.69
260 848 4.261405 CCCGCTTGTGTTCATTTCAACTTA 60.261 41.667 0.00 0.00 0.00 2.24
261 849 4.911610 CCGCTTGTGTTCATTTCAACTTAG 59.088 41.667 0.00 0.00 0.00 2.18
263 851 5.621228 CGCTTGTGTTCATTTCAACTTAGAC 59.379 40.000 0.00 0.00 0.00 2.59
264 852 6.511767 CGCTTGTGTTCATTTCAACTTAGACT 60.512 38.462 0.00 0.00 0.00 3.24
265 853 7.307160 CGCTTGTGTTCATTTCAACTTAGACTA 60.307 37.037 0.00 0.00 0.00 2.59
266 854 8.012241 GCTTGTGTTCATTTCAACTTAGACTAG 58.988 37.037 0.00 0.00 0.00 2.57
267 855 8.958119 TTGTGTTCATTTCAACTTAGACTAGT 57.042 30.769 0.00 0.00 0.00 2.57
268 856 8.589335 TGTGTTCATTTCAACTTAGACTAGTC 57.411 34.615 15.41 15.41 0.00 2.59
269 857 8.201464 TGTGTTCATTTCAACTTAGACTAGTCA 58.799 33.333 24.44 8.16 0.00 3.41
270 858 8.488764 GTGTTCATTTCAACTTAGACTAGTCAC 58.511 37.037 24.44 9.09 0.00 3.67
271 859 8.201464 TGTTCATTTCAACTTAGACTAGTCACA 58.799 33.333 24.44 11.46 0.00 3.58
272 860 9.042008 GTTCATTTCAACTTAGACTAGTCACAA 57.958 33.333 24.44 15.86 0.00 3.33
273 861 9.778741 TTCATTTCAACTTAGACTAGTCACAAT 57.221 29.630 24.44 6.62 0.00 2.71
274 862 9.208022 TCATTTCAACTTAGACTAGTCACAATG 57.792 33.333 24.44 16.90 0.00 2.82
275 863 7.962964 TTTCAACTTAGACTAGTCACAATGG 57.037 36.000 24.44 9.91 0.00 3.16
276 864 6.037786 TCAACTTAGACTAGTCACAATGGG 57.962 41.667 24.44 8.51 0.00 4.00
277 865 5.542635 TCAACTTAGACTAGTCACAATGGGT 59.457 40.000 24.44 9.48 0.00 4.51
278 866 6.722590 TCAACTTAGACTAGTCACAATGGGTA 59.277 38.462 24.44 3.05 0.00 3.69
279 867 7.233962 TCAACTTAGACTAGTCACAATGGGTAA 59.766 37.037 24.44 10.45 0.00 2.85
280 868 6.932947 ACTTAGACTAGTCACAATGGGTAAC 58.067 40.000 24.44 0.00 0.00 2.50
281 869 6.724905 ACTTAGACTAGTCACAATGGGTAACT 59.275 38.462 24.44 1.87 0.00 2.24
282 870 7.234988 ACTTAGACTAGTCACAATGGGTAACTT 59.765 37.037 24.44 1.44 0.00 2.66
283 871 8.654485 TTAGACTAGTCACAATGGGTAACTTA 57.346 34.615 24.44 0.48 0.00 2.24
284 872 7.171630 AGACTAGTCACAATGGGTAACTTAG 57.828 40.000 24.44 0.00 0.00 2.18
285 873 6.952358 AGACTAGTCACAATGGGTAACTTAGA 59.048 38.462 24.44 0.00 0.00 2.10
286 874 6.932947 ACTAGTCACAATGGGTAACTTAGAC 58.067 40.000 0.00 0.00 0.00 2.59
287 875 6.724905 ACTAGTCACAATGGGTAACTTAGACT 59.275 38.462 0.00 0.00 37.54 3.24
288 876 7.892241 ACTAGTCACAATGGGTAACTTAGACTA 59.108 37.037 0.00 0.00 35.63 2.59
289 877 7.171630 AGTCACAATGGGTAACTTAGACTAG 57.828 40.000 0.00 0.00 32.58 2.57
290 878 6.724905 AGTCACAATGGGTAACTTAGACTAGT 59.275 38.462 0.00 0.00 32.58 2.57
291 879 7.892241 AGTCACAATGGGTAACTTAGACTAGTA 59.108 37.037 0.00 0.00 32.58 1.82
292 880 8.526147 GTCACAATGGGTAACTTAGACTAGTAA 58.474 37.037 0.00 0.00 0.00 2.24
293 881 8.526147 TCACAATGGGTAACTTAGACTAGTAAC 58.474 37.037 0.00 0.00 0.00 2.50
294 882 8.308931 CACAATGGGTAACTTAGACTAGTAACA 58.691 37.037 0.00 0.00 0.00 2.41
295 883 9.043548 ACAATGGGTAACTTAGACTAGTAACAT 57.956 33.333 0.00 0.00 0.00 2.71
296 884 9.314321 CAATGGGTAACTTAGACTAGTAACATG 57.686 37.037 0.00 0.00 0.00 3.21
297 885 6.870769 TGGGTAACTTAGACTAGTAACATGC 58.129 40.000 0.00 0.00 0.00 4.06
298 886 6.438108 TGGGTAACTTAGACTAGTAACATGCA 59.562 38.462 0.00 0.00 0.00 3.96
299 887 7.125204 TGGGTAACTTAGACTAGTAACATGCAT 59.875 37.037 0.00 0.00 0.00 3.96
300 888 8.636213 GGGTAACTTAGACTAGTAACATGCATA 58.364 37.037 0.00 0.00 0.00 3.14
327 915 9.964354 TGTTACTAGTCTATGTTACTACCTTCA 57.036 33.333 0.00 0.00 0.00 3.02
329 917 9.964354 TTACTAGTCTATGTTACTACCTTCACA 57.036 33.333 0.00 0.00 0.00 3.58
330 918 8.508883 ACTAGTCTATGTTACTACCTTCACAG 57.491 38.462 0.00 0.00 0.00 3.66
331 919 8.108364 ACTAGTCTATGTTACTACCTTCACAGT 58.892 37.037 0.00 0.00 0.00 3.55
332 920 7.159322 AGTCTATGTTACTACCTTCACAGTG 57.841 40.000 0.00 0.00 0.00 3.66
333 921 6.153000 AGTCTATGTTACTACCTTCACAGTGG 59.847 42.308 0.00 0.00 0.00 4.00
334 922 4.553330 ATGTTACTACCTTCACAGTGGG 57.447 45.455 0.00 0.00 0.00 4.61
335 923 3.311091 TGTTACTACCTTCACAGTGGGT 58.689 45.455 0.00 3.68 37.16 4.51
336 924 4.482030 TGTTACTACCTTCACAGTGGGTA 58.518 43.478 0.00 4.71 34.86 3.69
341 929 5.069501 CTACCTTCACAGTGGGTAGTAAC 57.930 47.826 20.36 0.00 44.30 2.50
342 930 3.311091 ACCTTCACAGTGGGTAGTAACA 58.689 45.455 0.00 0.00 0.00 2.41
343 931 3.908103 ACCTTCACAGTGGGTAGTAACAT 59.092 43.478 0.00 0.00 0.00 2.71
344 932 5.088730 ACCTTCACAGTGGGTAGTAACATA 58.911 41.667 0.00 0.00 0.00 2.29
345 933 5.724854 ACCTTCACAGTGGGTAGTAACATAT 59.275 40.000 0.00 0.00 0.00 1.78
346 934 6.049149 CCTTCACAGTGGGTAGTAACATATG 58.951 44.000 0.00 0.00 0.00 1.78
347 935 6.351881 CCTTCACAGTGGGTAGTAACATATGT 60.352 42.308 1.41 1.41 0.00 2.29
348 936 7.147794 CCTTCACAGTGGGTAGTAACATATGTA 60.148 40.741 9.21 0.00 0.00 2.29
349 937 7.104043 TCACAGTGGGTAGTAACATATGTAC 57.896 40.000 9.21 3.27 0.00 2.90
350 938 6.893554 TCACAGTGGGTAGTAACATATGTACT 59.106 38.462 9.21 14.23 0.00 2.73
351 939 6.978659 CACAGTGGGTAGTAACATATGTACTG 59.021 42.308 21.35 21.35 38.15 2.74
352 940 6.666546 ACAGTGGGTAGTAACATATGTACTGT 59.333 38.462 22.30 22.30 39.86 3.55
353 941 6.978659 CAGTGGGTAGTAACATATGTACTGTG 59.021 42.308 17.34 1.48 0.00 3.66
354 942 6.666546 AGTGGGTAGTAACATATGTACTGTGT 59.333 38.462 9.21 0.00 0.00 3.72
355 943 6.976925 GTGGGTAGTAACATATGTACTGTGTC 59.023 42.308 9.21 0.00 0.00 3.67
356 944 6.664384 TGGGTAGTAACATATGTACTGTGTCA 59.336 38.462 9.21 1.40 0.00 3.58
357 945 7.343574 TGGGTAGTAACATATGTACTGTGTCAT 59.656 37.037 9.21 0.00 0.00 3.06
358 946 7.652105 GGGTAGTAACATATGTACTGTGTCATG 59.348 40.741 9.21 0.00 0.00 3.07
359 947 7.169308 GGTAGTAACATATGTACTGTGTCATGC 59.831 40.741 9.21 0.00 0.00 4.06
360 948 6.639563 AGTAACATATGTACTGTGTCATGCA 58.360 36.000 9.21 0.00 0.00 3.96
361 949 7.275183 AGTAACATATGTACTGTGTCATGCAT 58.725 34.615 9.21 0.00 0.00 3.96
362 950 6.609237 AACATATGTACTGTGTCATGCATC 57.391 37.500 9.21 0.00 0.00 3.91
363 951 5.673514 ACATATGTACTGTGTCATGCATCA 58.326 37.500 6.56 0.00 0.00 3.07
364 952 5.525012 ACATATGTACTGTGTCATGCATCAC 59.475 40.000 6.56 10.76 35.43 3.06
365 953 3.683365 TGTACTGTGTCATGCATCACT 57.317 42.857 16.78 3.61 35.82 3.41
366 954 4.006780 TGTACTGTGTCATGCATCACTT 57.993 40.909 16.78 8.53 35.82 3.16
367 955 3.996363 TGTACTGTGTCATGCATCACTTC 59.004 43.478 16.78 5.14 35.82 3.01
368 956 3.130280 ACTGTGTCATGCATCACTTCA 57.870 42.857 16.78 8.88 35.82 3.02
369 957 3.682696 ACTGTGTCATGCATCACTTCAT 58.317 40.909 16.78 1.14 35.82 2.57
370 958 4.077108 ACTGTGTCATGCATCACTTCATT 58.923 39.130 16.78 2.80 35.82 2.57
371 959 4.521639 ACTGTGTCATGCATCACTTCATTT 59.478 37.500 16.78 0.00 35.82 2.32
372 960 5.706833 ACTGTGTCATGCATCACTTCATTTA 59.293 36.000 16.78 0.00 35.82 1.40
373 961 6.376299 ACTGTGTCATGCATCACTTCATTTAT 59.624 34.615 16.78 0.00 35.82 1.40
374 962 7.094075 ACTGTGTCATGCATCACTTCATTTATT 60.094 33.333 16.78 0.00 35.82 1.40
375 963 8.278729 TGTGTCATGCATCACTTCATTTATTA 57.721 30.769 16.78 0.00 35.82 0.98
376 964 8.183536 TGTGTCATGCATCACTTCATTTATTAC 58.816 33.333 16.78 0.00 35.82 1.89
377 965 7.374228 GTGTCATGCATCACTTCATTTATTACG 59.626 37.037 1.37 0.00 0.00 3.18
378 966 7.065683 TGTCATGCATCACTTCATTTATTACGT 59.934 33.333 1.37 0.00 0.00 3.57
379 967 7.910162 GTCATGCATCACTTCATTTATTACGTT 59.090 33.333 0.00 0.00 0.00 3.99
380 968 7.909641 TCATGCATCACTTCATTTATTACGTTG 59.090 33.333 0.00 0.00 0.00 4.10
381 969 7.139896 TGCATCACTTCATTTATTACGTTGT 57.860 32.000 0.00 0.00 0.00 3.32
382 970 8.257830 TGCATCACTTCATTTATTACGTTGTA 57.742 30.769 0.00 0.00 0.00 2.41
383 971 8.387354 TGCATCACTTCATTTATTACGTTGTAG 58.613 33.333 0.00 0.00 0.00 2.74
384 972 8.600625 GCATCACTTCATTTATTACGTTGTAGA 58.399 33.333 0.00 0.00 0.00 2.59
385 973 9.901724 CATCACTTCATTTATTACGTTGTAGAC 57.098 33.333 0.00 0.00 0.00 2.59
386 974 9.871238 ATCACTTCATTTATTACGTTGTAGACT 57.129 29.630 0.00 0.00 0.00 3.24
387 975 9.350357 TCACTTCATTTATTACGTTGTAGACTC 57.650 33.333 0.00 0.00 0.00 3.36
388 976 9.135843 CACTTCATTTATTACGTTGTAGACTCA 57.864 33.333 0.00 0.00 0.00 3.41
389 977 9.871238 ACTTCATTTATTACGTTGTAGACTCAT 57.129 29.630 0.00 0.00 0.00 2.90
398 986 6.771188 ACGTTGTAGACTCATCTTTTCTTG 57.229 37.500 0.00 0.00 36.29 3.02
399 987 6.513180 ACGTTGTAGACTCATCTTTTCTTGA 58.487 36.000 0.00 0.00 36.29 3.02
400 988 7.155328 ACGTTGTAGACTCATCTTTTCTTGAT 58.845 34.615 0.00 0.00 36.29 2.57
401 989 8.304596 ACGTTGTAGACTCATCTTTTCTTGATA 58.695 33.333 0.00 0.00 36.29 2.15
402 990 9.307121 CGTTGTAGACTCATCTTTTCTTGATAT 57.693 33.333 0.00 0.00 36.29 1.63
408 996 9.730705 AGACTCATCTTTTCTTGATATTTGTGA 57.269 29.630 0.00 0.00 0.00 3.58
428 1016 8.926715 TTGTGATGTTACAGTAACTAGCTATG 57.073 34.615 21.56 0.00 39.38 2.23
429 1017 8.063200 TGTGATGTTACAGTAACTAGCTATGT 57.937 34.615 21.56 0.00 39.38 2.29
430 1018 8.528643 TGTGATGTTACAGTAACTAGCTATGTT 58.471 33.333 21.56 7.75 39.38 2.71
433 1021 9.460906 GATGTTACAGTAACTAGCTATGTTACC 57.539 37.037 25.92 17.65 46.31 2.85
434 1022 8.352137 TGTTACAGTAACTAGCTATGTTACCA 57.648 34.615 25.92 19.04 46.31 3.25
435 1023 8.246180 TGTTACAGTAACTAGCTATGTTACCAC 58.754 37.037 25.92 20.75 46.31 4.16
436 1024 6.845758 ACAGTAACTAGCTATGTTACCACA 57.154 37.500 25.92 6.86 46.31 4.17
437 1025 7.419711 ACAGTAACTAGCTATGTTACCACAT 57.580 36.000 25.92 14.84 46.31 3.21
438 1026 7.265673 ACAGTAACTAGCTATGTTACCACATG 58.734 38.462 25.92 22.03 46.31 3.21
439 1027 6.201044 CAGTAACTAGCTATGTTACCACATGC 59.799 42.308 25.92 11.98 46.31 4.06
440 1028 4.073293 ACTAGCTATGTTACCACATGCC 57.927 45.455 0.00 0.00 43.92 4.40
441 1029 3.711704 ACTAGCTATGTTACCACATGCCT 59.288 43.478 0.00 0.00 43.92 4.75
442 1030 3.652057 AGCTATGTTACCACATGCCTT 57.348 42.857 0.00 0.00 43.92 4.35
443 1031 3.968265 AGCTATGTTACCACATGCCTTT 58.032 40.909 0.00 0.00 43.92 3.11
444 1032 4.344104 AGCTATGTTACCACATGCCTTTT 58.656 39.130 0.00 0.00 43.92 2.27
445 1033 4.772100 AGCTATGTTACCACATGCCTTTTT 59.228 37.500 0.00 0.00 43.92 1.94
485 1073 9.547753 ACATGTCACATCATCTATTTTACCTAC 57.452 33.333 0.00 0.00 0.00 3.18
486 1074 9.770097 CATGTCACATCATCTATTTTACCTACT 57.230 33.333 0.00 0.00 0.00 2.57
487 1075 9.988815 ATGTCACATCATCTATTTTACCTACTC 57.011 33.333 0.00 0.00 0.00 2.59
488 1076 8.421784 TGTCACATCATCTATTTTACCTACTCC 58.578 37.037 0.00 0.00 0.00 3.85
489 1077 7.873505 GTCACATCATCTATTTTACCTACTCCC 59.126 40.741 0.00 0.00 0.00 4.30
490 1078 7.789831 TCACATCATCTATTTTACCTACTCCCT 59.210 37.037 0.00 0.00 0.00 4.20
491 1079 8.091449 CACATCATCTATTTTACCTACTCCCTC 58.909 40.741 0.00 0.00 0.00 4.30
492 1080 7.235812 ACATCATCTATTTTACCTACTCCCTCC 59.764 40.741 0.00 0.00 0.00 4.30
493 1081 5.773680 TCATCTATTTTACCTACTCCCTCCG 59.226 44.000 0.00 0.00 0.00 4.63
494 1082 5.134725 TCTATTTTACCTACTCCCTCCGT 57.865 43.478 0.00 0.00 0.00 4.69
495 1083 5.136105 TCTATTTTACCTACTCCCTCCGTC 58.864 45.833 0.00 0.00 0.00 4.79
496 1084 3.463048 TTTTACCTACTCCCTCCGTCT 57.537 47.619 0.00 0.00 0.00 4.18
497 1085 4.591321 TTTTACCTACTCCCTCCGTCTA 57.409 45.455 0.00 0.00 0.00 2.59
498 1086 3.853355 TTACCTACTCCCTCCGTCTAG 57.147 52.381 0.00 0.00 0.00 2.43
499 1087 0.845337 ACCTACTCCCTCCGTCTAGG 59.155 60.000 0.00 0.00 42.97 3.02
500 1088 0.845337 CCTACTCCCTCCGTCTAGGT 59.155 60.000 0.00 0.00 41.99 3.08
501 1089 1.477195 CCTACTCCCTCCGTCTAGGTG 60.477 61.905 0.00 0.00 41.99 4.00
502 1090 1.489649 CTACTCCCTCCGTCTAGGTGA 59.510 57.143 0.00 0.00 41.99 4.02
503 1091 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51
504 1092 0.256464 CTCCCTCCGTCTAGGTGAGT 59.744 60.000 0.00 0.00 41.99 3.41
505 1093 1.489649 CTCCCTCCGTCTAGGTGAGTA 59.510 57.143 0.00 0.00 41.99 2.59
506 1094 1.918262 TCCCTCCGTCTAGGTGAGTAA 59.082 52.381 0.00 0.00 41.99 2.24
507 1095 2.092538 TCCCTCCGTCTAGGTGAGTAAG 60.093 54.545 0.00 0.00 41.99 2.34
508 1096 1.677052 CCTCCGTCTAGGTGAGTAAGC 59.323 57.143 0.00 0.00 41.99 3.09
509 1097 1.677052 CTCCGTCTAGGTGAGTAAGCC 59.323 57.143 0.00 0.00 41.99 4.35
510 1098 1.005097 TCCGTCTAGGTGAGTAAGCCA 59.995 52.381 0.00 0.00 41.99 4.75
511 1099 2.032620 CCGTCTAGGTGAGTAAGCCAT 58.967 52.381 0.00 0.00 34.51 4.40
512 1100 2.034812 CCGTCTAGGTGAGTAAGCCATC 59.965 54.545 0.00 0.00 34.51 3.51
513 1101 2.952978 CGTCTAGGTGAGTAAGCCATCT 59.047 50.000 0.00 0.00 0.00 2.90
514 1102 3.381908 CGTCTAGGTGAGTAAGCCATCTT 59.618 47.826 0.00 0.00 36.35 2.40
515 1103 4.579340 CGTCTAGGTGAGTAAGCCATCTTA 59.421 45.833 0.00 0.00 33.85 2.10
516 1104 5.278071 CGTCTAGGTGAGTAAGCCATCTTAG 60.278 48.000 0.00 0.00 35.60 2.18
517 1105 5.828859 GTCTAGGTGAGTAAGCCATCTTAGA 59.171 44.000 0.00 0.00 35.60 2.10
518 1106 6.492087 GTCTAGGTGAGTAAGCCATCTTAGAT 59.508 42.308 0.00 0.00 35.60 1.98
519 1107 7.014808 GTCTAGGTGAGTAAGCCATCTTAGATT 59.985 40.741 0.00 0.00 35.60 2.40
520 1108 5.923204 AGGTGAGTAAGCCATCTTAGATTG 58.077 41.667 0.00 0.00 35.60 2.67
521 1109 5.426833 AGGTGAGTAAGCCATCTTAGATTGT 59.573 40.000 0.00 0.00 35.60 2.71
522 1110 5.525378 GGTGAGTAAGCCATCTTAGATTGTG 59.475 44.000 0.00 0.00 35.60 3.33
523 1111 5.007136 GTGAGTAAGCCATCTTAGATTGTGC 59.993 44.000 0.00 0.00 35.60 4.57
524 1112 5.102953 AGTAAGCCATCTTAGATTGTGCA 57.897 39.130 9.72 0.00 35.60 4.57
525 1113 4.878397 AGTAAGCCATCTTAGATTGTGCAC 59.122 41.667 10.75 10.75 35.60 4.57
526 1114 2.648059 AGCCATCTTAGATTGTGCACC 58.352 47.619 15.69 0.00 0.00 5.01
527 1115 1.331756 GCCATCTTAGATTGTGCACCG 59.668 52.381 15.69 0.00 0.00 4.94
528 1116 2.632377 CCATCTTAGATTGTGCACCGT 58.368 47.619 15.69 1.98 0.00 4.83
529 1117 2.352651 CCATCTTAGATTGTGCACCGTG 59.647 50.000 15.69 0.00 0.00 4.94
530 1118 3.261580 CATCTTAGATTGTGCACCGTGA 58.738 45.455 15.69 3.49 0.00 4.35
531 1119 3.610040 TCTTAGATTGTGCACCGTGAT 57.390 42.857 15.69 3.02 0.00 3.06
532 1120 3.521560 TCTTAGATTGTGCACCGTGATC 58.478 45.455 15.69 12.16 0.00 2.92
533 1121 3.056179 TCTTAGATTGTGCACCGTGATCA 60.056 43.478 15.69 0.00 0.00 2.92
534 1122 2.183478 AGATTGTGCACCGTGATCAA 57.817 45.000 15.69 6.96 0.00 2.57
535 1123 2.079158 AGATTGTGCACCGTGATCAAG 58.921 47.619 15.69 0.00 0.00 3.02
536 1124 1.131126 GATTGTGCACCGTGATCAAGG 59.869 52.381 24.13 24.13 35.99 3.61
537 1125 0.107643 TTGTGCACCGTGATCAAGGA 59.892 50.000 31.07 8.96 33.97 3.36
538 1126 0.107643 TGTGCACCGTGATCAAGGAA 59.892 50.000 31.07 14.81 33.97 3.36
539 1127 0.798776 GTGCACCGTGATCAAGGAAG 59.201 55.000 31.07 22.65 33.97 3.46
540 1128 0.684535 TGCACCGTGATCAAGGAAGA 59.315 50.000 31.07 12.72 33.97 2.87
541 1129 1.338105 TGCACCGTGATCAAGGAAGAG 60.338 52.381 31.07 18.39 33.97 2.85
542 1130 2.009042 GCACCGTGATCAAGGAAGAGG 61.009 57.143 31.07 16.04 33.97 3.69
543 1131 0.905357 ACCGTGATCAAGGAAGAGGG 59.095 55.000 31.07 9.17 33.97 4.30
544 1132 0.179000 CCGTGATCAAGGAAGAGGGG 59.821 60.000 21.80 0.00 31.21 4.79
545 1133 1.195115 CGTGATCAAGGAAGAGGGGA 58.805 55.000 0.00 0.00 0.00 4.81
546 1134 1.555075 CGTGATCAAGGAAGAGGGGAA 59.445 52.381 0.00 0.00 0.00 3.97
547 1135 2.027192 CGTGATCAAGGAAGAGGGGAAA 60.027 50.000 0.00 0.00 0.00 3.13
548 1136 3.559171 CGTGATCAAGGAAGAGGGGAAAA 60.559 47.826 0.00 0.00 0.00 2.29
549 1137 3.759086 GTGATCAAGGAAGAGGGGAAAAC 59.241 47.826 0.00 0.00 0.00 2.43
550 1138 2.561478 TCAAGGAAGAGGGGAAAACG 57.439 50.000 0.00 0.00 0.00 3.60
551 1139 2.051692 TCAAGGAAGAGGGGAAAACGA 58.948 47.619 0.00 0.00 0.00 3.85
552 1140 2.038557 TCAAGGAAGAGGGGAAAACGAG 59.961 50.000 0.00 0.00 0.00 4.18
553 1141 2.025636 AGGAAGAGGGGAAAACGAGA 57.974 50.000 0.00 0.00 0.00 4.04
554 1142 1.903183 AGGAAGAGGGGAAAACGAGAG 59.097 52.381 0.00 0.00 0.00 3.20
555 1143 1.900486 GGAAGAGGGGAAAACGAGAGA 59.100 52.381 0.00 0.00 0.00 3.10
556 1144 2.353903 GGAAGAGGGGAAAACGAGAGAC 60.354 54.545 0.00 0.00 0.00 3.36
557 1145 2.011122 AGAGGGGAAAACGAGAGACA 57.989 50.000 0.00 0.00 0.00 3.41
558 1146 2.541466 AGAGGGGAAAACGAGAGACAT 58.459 47.619 0.00 0.00 0.00 3.06
559 1147 2.907042 AGAGGGGAAAACGAGAGACATT 59.093 45.455 0.00 0.00 0.00 2.71
560 1148 4.094476 AGAGGGGAAAACGAGAGACATTA 58.906 43.478 0.00 0.00 0.00 1.90
561 1149 4.530946 AGAGGGGAAAACGAGAGACATTAA 59.469 41.667 0.00 0.00 0.00 1.40
562 1150 5.189934 AGAGGGGAAAACGAGAGACATTAAT 59.810 40.000 0.00 0.00 0.00 1.40
563 1151 5.186198 AGGGGAAAACGAGAGACATTAATG 58.814 41.667 14.01 14.01 0.00 1.90
564 1152 4.941873 GGGGAAAACGAGAGACATTAATGT 59.058 41.667 20.93 20.93 45.16 2.71
565 1153 5.414765 GGGGAAAACGAGAGACATTAATGTT 59.585 40.000 21.63 11.84 41.95 2.71
566 1154 6.072119 GGGGAAAACGAGAGACATTAATGTTT 60.072 38.462 21.63 16.47 41.95 2.83
567 1155 7.120138 GGGGAAAACGAGAGACATTAATGTTTA 59.880 37.037 21.63 0.00 41.95 2.01
568 1156 8.674607 GGGAAAACGAGAGACATTAATGTTTAT 58.325 33.333 21.63 13.84 41.95 1.40
609 1197 3.855689 ATGCAATGAACTAACCACTGC 57.144 42.857 0.00 0.00 0.00 4.40
610 1198 2.580962 TGCAATGAACTAACCACTGCA 58.419 42.857 0.00 0.00 36.06 4.41
611 1199 3.156293 TGCAATGAACTAACCACTGCAT 58.844 40.909 0.00 0.00 33.65 3.96
612 1200 3.057386 TGCAATGAACTAACCACTGCATG 60.057 43.478 0.00 0.00 33.65 4.06
613 1201 3.057315 GCAATGAACTAACCACTGCATGT 60.057 43.478 0.00 0.00 0.00 3.21
614 1202 4.726416 CAATGAACTAACCACTGCATGTC 58.274 43.478 0.00 0.00 0.00 3.06
615 1203 3.769739 TGAACTAACCACTGCATGTCT 57.230 42.857 0.00 0.00 0.00 3.41
616 1204 4.085357 TGAACTAACCACTGCATGTCTT 57.915 40.909 0.00 0.00 0.00 3.01
617 1205 5.222079 TGAACTAACCACTGCATGTCTTA 57.778 39.130 0.00 0.00 0.00 2.10
618 1206 5.804639 TGAACTAACCACTGCATGTCTTAT 58.195 37.500 0.00 0.00 0.00 1.73
619 1207 6.237901 TGAACTAACCACTGCATGTCTTATT 58.762 36.000 0.00 0.00 0.00 1.40
620 1208 6.714810 TGAACTAACCACTGCATGTCTTATTT 59.285 34.615 0.00 0.00 0.00 1.40
621 1209 6.500684 ACTAACCACTGCATGTCTTATTTG 57.499 37.500 0.00 0.00 0.00 2.32
622 1210 6.003950 ACTAACCACTGCATGTCTTATTTGT 58.996 36.000 0.00 0.00 0.00 2.83
623 1211 7.165485 ACTAACCACTGCATGTCTTATTTGTA 58.835 34.615 0.00 0.00 0.00 2.41
624 1212 6.500684 AACCACTGCATGTCTTATTTGTAG 57.499 37.500 0.00 0.00 0.00 2.74
625 1213 5.560724 ACCACTGCATGTCTTATTTGTAGT 58.439 37.500 0.00 0.00 36.87 2.73
626 1214 5.643777 ACCACTGCATGTCTTATTTGTAGTC 59.356 40.000 0.00 0.00 34.67 2.59
627 1215 5.877012 CCACTGCATGTCTTATTTGTAGTCT 59.123 40.000 0.00 0.00 34.67 3.24
628 1216 7.041721 CCACTGCATGTCTTATTTGTAGTCTA 58.958 38.462 0.00 0.00 34.67 2.59
629 1217 7.549134 CCACTGCATGTCTTATTTGTAGTCTAA 59.451 37.037 0.00 0.00 34.67 2.10
630 1218 8.935844 CACTGCATGTCTTATTTGTAGTCTAAA 58.064 33.333 0.00 0.00 34.67 1.85
631 1219 9.155975 ACTGCATGTCTTATTTGTAGTCTAAAG 57.844 33.333 0.00 0.00 31.87 1.85
632 1220 9.155975 CTGCATGTCTTATTTGTAGTCTAAAGT 57.844 33.333 0.00 0.00 0.00 2.66
633 1221 9.151471 TGCATGTCTTATTTGTAGTCTAAAGTC 57.849 33.333 0.00 0.00 0.00 3.01
634 1222 9.151471 GCATGTCTTATTTGTAGTCTAAAGTCA 57.849 33.333 0.00 0.00 0.00 3.41
649 1237 8.629158 AGTCTAAAGTCATTAAAAACATGCACA 58.371 29.630 0.00 0.00 0.00 4.57
650 1238 8.690840 GTCTAAAGTCATTAAAAACATGCACAC 58.309 33.333 0.00 0.00 0.00 3.82
651 1239 6.843069 AAAGTCATTAAAAACATGCACACC 57.157 33.333 0.00 0.00 0.00 4.16
652 1240 4.881920 AGTCATTAAAAACATGCACACCC 58.118 39.130 0.00 0.00 0.00 4.61
653 1241 3.993736 GTCATTAAAAACATGCACACCCC 59.006 43.478 0.00 0.00 0.00 4.95
654 1242 3.900601 TCATTAAAAACATGCACACCCCT 59.099 39.130 0.00 0.00 0.00 4.79
655 1243 4.021544 TCATTAAAAACATGCACACCCCTC 60.022 41.667 0.00 0.00 0.00 4.30
656 1244 1.786937 AAAAACATGCACACCCCTCA 58.213 45.000 0.00 0.00 0.00 3.86
657 1245 2.014010 AAAACATGCACACCCCTCAT 57.986 45.000 0.00 0.00 0.00 2.90
658 1246 1.549203 AAACATGCACACCCCTCATC 58.451 50.000 0.00 0.00 0.00 2.92
659 1247 0.700564 AACATGCACACCCCTCATCT 59.299 50.000 0.00 0.00 0.00 2.90
660 1248 0.254178 ACATGCACACCCCTCATCTC 59.746 55.000 0.00 0.00 0.00 2.75
661 1249 0.545171 CATGCACACCCCTCATCTCT 59.455 55.000 0.00 0.00 0.00 3.10
662 1250 1.064906 CATGCACACCCCTCATCTCTT 60.065 52.381 0.00 0.00 0.00 2.85
663 1251 1.951209 TGCACACCCCTCATCTCTTA 58.049 50.000 0.00 0.00 0.00 2.10
664 1252 2.481441 TGCACACCCCTCATCTCTTAT 58.519 47.619 0.00 0.00 0.00 1.73
665 1253 2.846206 TGCACACCCCTCATCTCTTATT 59.154 45.455 0.00 0.00 0.00 1.40
666 1254 3.209410 GCACACCCCTCATCTCTTATTG 58.791 50.000 0.00 0.00 0.00 1.90
667 1255 3.813443 CACACCCCTCATCTCTTATTGG 58.187 50.000 0.00 0.00 0.00 3.16
668 1256 3.200825 CACACCCCTCATCTCTTATTGGT 59.799 47.826 0.00 0.00 0.00 3.67
669 1257 3.852578 ACACCCCTCATCTCTTATTGGTT 59.147 43.478 0.00 0.00 0.00 3.67
670 1258 4.202441 CACCCCTCATCTCTTATTGGTTG 58.798 47.826 0.00 0.00 0.00 3.77
671 1259 4.080356 CACCCCTCATCTCTTATTGGTTGA 60.080 45.833 0.00 0.00 0.00 3.18
672 1260 4.728860 ACCCCTCATCTCTTATTGGTTGAT 59.271 41.667 0.00 0.00 0.00 2.57
673 1261 5.911178 ACCCCTCATCTCTTATTGGTTGATA 59.089 40.000 0.00 0.00 0.00 2.15
674 1262 6.564152 ACCCCTCATCTCTTATTGGTTGATAT 59.436 38.462 0.00 0.00 0.00 1.63
675 1263 6.883217 CCCCTCATCTCTTATTGGTTGATATG 59.117 42.308 0.00 0.00 0.00 1.78
676 1264 7.456725 CCCTCATCTCTTATTGGTTGATATGT 58.543 38.462 0.00 0.00 0.00 2.29
677 1265 7.605691 CCCTCATCTCTTATTGGTTGATATGTC 59.394 40.741 0.00 0.00 0.00 3.06
678 1266 8.152898 CCTCATCTCTTATTGGTTGATATGTCA 58.847 37.037 0.00 0.00 0.00 3.58
679 1267 9.551734 CTCATCTCTTATTGGTTGATATGTCAA 57.448 33.333 0.03 0.03 41.89 3.18
680 1268 9.551734 TCATCTCTTATTGGTTGATATGTCAAG 57.448 33.333 4.98 0.00 44.58 3.02
681 1269 9.551734 CATCTCTTATTGGTTGATATGTCAAGA 57.448 33.333 4.98 0.00 44.58 3.02
683 1271 9.958180 TCTCTTATTGGTTGATATGTCAAGAAA 57.042 29.630 4.98 3.84 44.58 2.52
684 1272 9.994432 CTCTTATTGGTTGATATGTCAAGAAAC 57.006 33.333 4.98 0.00 44.58 2.78
685 1273 9.513906 TCTTATTGGTTGATATGTCAAGAAACA 57.486 29.630 4.98 0.63 44.58 2.83
688 1276 7.815840 TTGGTTGATATGTCAAGAAACAAGA 57.184 32.000 4.98 0.00 44.58 3.02
689 1277 7.815840 TGGTTGATATGTCAAGAAACAAGAA 57.184 32.000 4.98 0.00 44.58 2.52
690 1278 8.231692 TGGTTGATATGTCAAGAAACAAGAAA 57.768 30.769 4.98 0.00 44.58 2.52
691 1279 8.134895 TGGTTGATATGTCAAGAAACAAGAAAC 58.865 33.333 4.98 0.00 44.58 2.78
692 1280 7.323656 GGTTGATATGTCAAGAAACAAGAAACG 59.676 37.037 4.98 0.00 44.58 3.60
693 1281 7.722795 TGATATGTCAAGAAACAAGAAACGA 57.277 32.000 0.00 0.00 31.81 3.85
694 1282 7.796838 TGATATGTCAAGAAACAAGAAACGAG 58.203 34.615 0.00 0.00 31.81 4.18
695 1283 4.875544 TGTCAAGAAACAAGAAACGAGG 57.124 40.909 0.00 0.00 0.00 4.63
696 1284 4.258543 TGTCAAGAAACAAGAAACGAGGT 58.741 39.130 0.00 0.00 0.00 3.85
697 1285 5.421277 TGTCAAGAAACAAGAAACGAGGTA 58.579 37.500 0.00 0.00 0.00 3.08
698 1286 5.522460 TGTCAAGAAACAAGAAACGAGGTAG 59.478 40.000 0.00 0.00 0.00 3.18
699 1287 5.751990 GTCAAGAAACAAGAAACGAGGTAGA 59.248 40.000 0.00 0.00 0.00 2.59
700 1288 6.257193 GTCAAGAAACAAGAAACGAGGTAGAA 59.743 38.462 0.00 0.00 0.00 2.10
701 1289 6.479001 TCAAGAAACAAGAAACGAGGTAGAAG 59.521 38.462 0.00 0.00 0.00 2.85
702 1290 5.915175 AGAAACAAGAAACGAGGTAGAAGT 58.085 37.500 0.00 0.00 0.00 3.01
703 1291 6.346896 AGAAACAAGAAACGAGGTAGAAGTT 58.653 36.000 0.00 0.00 0.00 2.66
704 1292 7.495055 AGAAACAAGAAACGAGGTAGAAGTTA 58.505 34.615 0.00 0.00 0.00 2.24
705 1293 7.983484 AGAAACAAGAAACGAGGTAGAAGTTAA 59.017 33.333 0.00 0.00 0.00 2.01
706 1294 7.710766 AACAAGAAACGAGGTAGAAGTTAAG 57.289 36.000 0.00 0.00 0.00 1.85
707 1295 6.221659 ACAAGAAACGAGGTAGAAGTTAAGG 58.778 40.000 0.00 0.00 0.00 2.69
708 1296 4.818642 AGAAACGAGGTAGAAGTTAAGGC 58.181 43.478 0.00 0.00 0.00 4.35
709 1297 4.282703 AGAAACGAGGTAGAAGTTAAGGCA 59.717 41.667 0.00 0.00 0.00 4.75
710 1298 3.589495 ACGAGGTAGAAGTTAAGGCAC 57.411 47.619 0.00 0.00 0.00 5.01
711 1299 2.233186 ACGAGGTAGAAGTTAAGGCACC 59.767 50.000 0.00 0.00 0.00 5.01
712 1300 2.734492 CGAGGTAGAAGTTAAGGCACCG 60.734 54.545 0.00 0.00 0.00 4.94
713 1301 1.066358 AGGTAGAAGTTAAGGCACCGC 60.066 52.381 0.00 0.00 0.00 5.68
714 1302 0.997196 GTAGAAGTTAAGGCACCGCG 59.003 55.000 0.00 0.00 0.00 6.46
715 1303 0.738412 TAGAAGTTAAGGCACCGCGC 60.738 55.000 0.00 0.00 41.28 6.86
724 1312 3.047877 GCACCGCGCCTAAGTGTT 61.048 61.111 12.83 0.00 33.96 3.32
725 1313 2.613506 GCACCGCGCCTAAGTGTTT 61.614 57.895 12.83 0.00 33.96 2.83
726 1314 1.946267 CACCGCGCCTAAGTGTTTT 59.054 52.632 0.00 0.00 0.00 2.43
727 1315 1.149987 CACCGCGCCTAAGTGTTTTA 58.850 50.000 0.00 0.00 0.00 1.52
728 1316 1.127951 CACCGCGCCTAAGTGTTTTAG 59.872 52.381 0.00 0.00 0.00 1.85
729 1317 0.725117 CCGCGCCTAAGTGTTTTAGG 59.275 55.000 0.00 8.30 43.38 2.69
730 1318 1.673626 CCGCGCCTAAGTGTTTTAGGA 60.674 52.381 15.32 0.00 43.24 2.94
731 1319 2.277084 CGCGCCTAAGTGTTTTAGGAT 58.723 47.619 15.32 0.00 43.24 3.24
732 1320 2.676342 CGCGCCTAAGTGTTTTAGGATT 59.324 45.455 15.32 0.00 43.24 3.01
733 1321 3.866910 CGCGCCTAAGTGTTTTAGGATTA 59.133 43.478 15.32 0.00 43.24 1.75
734 1322 4.510340 CGCGCCTAAGTGTTTTAGGATTAT 59.490 41.667 15.32 0.00 43.24 1.28
735 1323 5.007332 CGCGCCTAAGTGTTTTAGGATTATT 59.993 40.000 15.32 0.00 43.24 1.40
736 1324 6.457799 CGCGCCTAAGTGTTTTAGGATTATTT 60.458 38.462 15.32 0.00 43.24 1.40
737 1325 6.691388 GCGCCTAAGTGTTTTAGGATTATTTG 59.309 38.462 15.32 0.00 43.24 2.32
738 1326 7.193595 CGCCTAAGTGTTTTAGGATTATTTGG 58.806 38.462 15.32 0.00 43.24 3.28
739 1327 7.148137 CGCCTAAGTGTTTTAGGATTATTTGGT 60.148 37.037 15.32 0.00 43.24 3.67
740 1328 8.528643 GCCTAAGTGTTTTAGGATTATTTGGTT 58.471 33.333 15.32 0.00 43.24 3.67
760 1348 8.684386 TTGGTTTTCATAAGATGACTTACACA 57.316 30.769 0.00 0.00 40.71 3.72
761 1349 8.094798 TGGTTTTCATAAGATGACTTACACAC 57.905 34.615 0.00 0.00 40.71 3.82
762 1350 7.174253 TGGTTTTCATAAGATGACTTACACACC 59.826 37.037 0.00 0.00 40.71 4.16
763 1351 7.390718 GGTTTTCATAAGATGACTTACACACCT 59.609 37.037 0.00 0.00 40.71 4.00
764 1352 9.431887 GTTTTCATAAGATGACTTACACACCTA 57.568 33.333 0.00 0.00 40.71 3.08
765 1353 8.997621 TTTCATAAGATGACTTACACACCTAC 57.002 34.615 0.00 0.00 40.71 3.18
766 1354 7.712204 TCATAAGATGACTTACACACCTACA 57.288 36.000 0.00 0.00 40.71 2.74
767 1355 7.544622 TCATAAGATGACTTACACACCTACAC 58.455 38.462 0.00 0.00 40.71 2.90
768 1356 4.436242 AGATGACTTACACACCTACACG 57.564 45.455 0.00 0.00 0.00 4.49
769 1357 3.192844 AGATGACTTACACACCTACACGG 59.807 47.826 0.00 0.00 39.35 4.94
770 1358 2.585330 TGACTTACACACCTACACGGA 58.415 47.619 0.00 0.00 36.31 4.69
771 1359 2.555325 TGACTTACACACCTACACGGAG 59.445 50.000 0.00 0.00 36.31 4.63
772 1360 1.891150 ACTTACACACCTACACGGAGG 59.109 52.381 0.00 0.00 42.89 4.30
773 1361 1.203994 CTTACACACCTACACGGAGGG 59.796 57.143 0.00 0.00 41.36 4.30
774 1362 0.405198 TACACACCTACACGGAGGGA 59.595 55.000 0.00 0.00 41.36 4.20
775 1363 0.898789 ACACACCTACACGGAGGGAG 60.899 60.000 0.00 0.00 41.36 4.30
776 1364 0.898789 CACACCTACACGGAGGGAGT 60.899 60.000 0.00 0.00 41.36 3.85
777 1365 0.700564 ACACCTACACGGAGGGAGTA 59.299 55.000 0.00 0.00 41.36 2.59
778 1366 1.340795 ACACCTACACGGAGGGAGTAG 60.341 57.143 0.00 0.00 41.36 2.57
779 1367 1.064906 CACCTACACGGAGGGAGTAGA 60.065 57.143 0.00 0.00 41.36 2.59
780 1368 1.851653 ACCTACACGGAGGGAGTAGAT 59.148 52.381 0.00 0.00 41.36 1.98
781 1369 3.051581 ACCTACACGGAGGGAGTAGATA 58.948 50.000 0.00 0.00 41.36 1.98
782 1370 3.461085 ACCTACACGGAGGGAGTAGATAA 59.539 47.826 0.00 0.00 41.36 1.75
783 1371 4.073549 CCTACACGGAGGGAGTAGATAAG 58.926 52.174 0.00 0.00 37.92 1.73
784 1372 3.666345 ACACGGAGGGAGTAGATAAGT 57.334 47.619 0.00 0.00 0.00 2.24
785 1373 3.288964 ACACGGAGGGAGTAGATAAGTG 58.711 50.000 0.00 0.00 0.00 3.16
786 1374 3.288964 CACGGAGGGAGTAGATAAGTGT 58.711 50.000 0.00 0.00 0.00 3.55
787 1375 3.066900 CACGGAGGGAGTAGATAAGTGTG 59.933 52.174 0.00 0.00 0.00 3.82
788 1376 3.053842 ACGGAGGGAGTAGATAAGTGTGA 60.054 47.826 0.00 0.00 0.00 3.58
789 1377 4.145807 CGGAGGGAGTAGATAAGTGTGAT 58.854 47.826 0.00 0.00 0.00 3.06
790 1378 4.022762 CGGAGGGAGTAGATAAGTGTGATG 60.023 50.000 0.00 0.00 0.00 3.07
791 1379 4.896482 GGAGGGAGTAGATAAGTGTGATGT 59.104 45.833 0.00 0.00 0.00 3.06
792 1380 5.364157 GGAGGGAGTAGATAAGTGTGATGTT 59.636 44.000 0.00 0.00 0.00 2.71
793 1381 6.550108 GGAGGGAGTAGATAAGTGTGATGTTA 59.450 42.308 0.00 0.00 0.00 2.41
794 1382 7.349412 AGGGAGTAGATAAGTGTGATGTTAC 57.651 40.000 0.00 0.00 0.00 2.50
795 1383 6.324254 AGGGAGTAGATAAGTGTGATGTTACC 59.676 42.308 0.00 0.00 0.00 2.85
796 1384 6.097839 GGGAGTAGATAAGTGTGATGTTACCA 59.902 42.308 0.00 0.00 0.00 3.25
797 1385 7.202011 GGGAGTAGATAAGTGTGATGTTACCAT 60.202 40.741 0.00 0.00 0.00 3.55
798 1386 7.868415 GGAGTAGATAAGTGTGATGTTACCATC 59.132 40.741 0.00 0.00 46.41 3.51
811 1399 6.928348 ATGTTACCATCGATATTACTCCCA 57.072 37.500 0.00 0.00 0.00 4.37
812 1400 6.092955 TGTTACCATCGATATTACTCCCAC 57.907 41.667 0.00 0.00 0.00 4.61
813 1401 5.836898 TGTTACCATCGATATTACTCCCACT 59.163 40.000 0.00 0.00 0.00 4.00
814 1402 7.005902 TGTTACCATCGATATTACTCCCACTA 58.994 38.462 0.00 0.00 0.00 2.74
815 1403 7.672660 TGTTACCATCGATATTACTCCCACTAT 59.327 37.037 0.00 0.00 0.00 2.12
816 1404 6.531503 ACCATCGATATTACTCCCACTATG 57.468 41.667 0.00 0.00 0.00 2.23
817 1405 5.422331 ACCATCGATATTACTCCCACTATGG 59.578 44.000 0.00 0.00 36.93 2.74
830 1418 3.314693 CCACTATGGGTATGTGGGTAGT 58.685 50.000 0.00 0.00 45.29 2.73
831 1419 3.323979 CCACTATGGGTATGTGGGTAGTC 59.676 52.174 0.00 0.00 45.29 2.59
832 1420 4.223953 CACTATGGGTATGTGGGTAGTCT 58.776 47.826 0.00 0.00 0.00 3.24
833 1421 4.654262 CACTATGGGTATGTGGGTAGTCTT 59.346 45.833 0.00 0.00 0.00 3.01
834 1422 5.836898 CACTATGGGTATGTGGGTAGTCTTA 59.163 44.000 0.00 0.00 0.00 2.10
835 1423 5.837438 ACTATGGGTATGTGGGTAGTCTTAC 59.163 44.000 0.00 0.00 0.00 2.34
901 1493 1.617947 GGATCGCTGGACCCTTGACT 61.618 60.000 0.00 0.00 0.00 3.41
947 1540 1.700029 CGGTTACGTGACGTGATGC 59.300 57.895 22.16 7.62 41.39 3.91
1058 1681 0.875059 GTTCGTTCCTTCCTTGGCAG 59.125 55.000 0.00 0.00 0.00 4.85
1087 1714 0.247460 CATGGCTCTCCGTCTTCACA 59.753 55.000 0.00 0.00 34.14 3.58
1098 1725 2.173519 CGTCTTCACAACCTACCCCTA 58.826 52.381 0.00 0.00 0.00 3.53
1100 1727 2.235650 GTCTTCACAACCTACCCCTACC 59.764 54.545 0.00 0.00 0.00 3.18
1121 1754 2.520741 CCTCCTCCTCCTCCTCGC 60.521 72.222 0.00 0.00 0.00 5.03
1515 2211 4.785453 CTTCCGCTCCCTGCCACC 62.785 72.222 0.00 0.00 38.78 4.61
2003 2700 4.069232 CTCCTGCTTCGACGGCCA 62.069 66.667 2.24 0.00 0.00 5.36
2475 3188 2.968206 GTCTACGTGCCGTTCCCT 59.032 61.111 0.00 0.00 41.54 4.20
2772 3678 0.235926 GCTCTGTTCCGACTGTTTGC 59.764 55.000 0.00 0.00 0.00 3.68
2785 3691 4.592179 GACTGTTTGCTCAACTTCTGTTC 58.408 43.478 1.74 0.00 36.21 3.18
2832 3776 7.015226 TGCATGCATCAGTTACAGTTTATAC 57.985 36.000 18.46 0.00 0.00 1.47
2954 3918 2.821969 GTTTGTTGATCAGGCACAGGAT 59.178 45.455 0.00 0.00 0.00 3.24
3325 5042 1.819288 GACTGATGAACTCACCTCGGA 59.181 52.381 0.00 0.00 0.00 4.55
3473 5278 2.281761 AGAGTTGGTTGCTGGGCG 60.282 61.111 0.00 0.00 0.00 6.13
3534 5378 4.883585 TGTGTCTGATCAAGCAGTTTCTTT 59.116 37.500 0.00 0.00 37.20 2.52
3616 5461 3.000041 TGTCGTCATGCATGGTCTTTAC 59.000 45.455 25.97 14.42 0.00 2.01
3648 5529 2.289694 ACCTCACTCGCTTAAATGCAGT 60.290 45.455 0.00 0.00 0.00 4.40
3656 9049 3.436704 TCGCTTAAATGCAGTGAAAGGAG 59.563 43.478 10.42 0.00 0.00 3.69
3665 9058 1.345741 CAGTGAAAGGAGGTGCAGAGA 59.654 52.381 0.00 0.00 0.00 3.10
3668 9061 2.550180 GTGAAAGGAGGTGCAGAGAAAC 59.450 50.000 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 117 1.757699 CAGTCCCTAGTAGCTCAACCC 59.242 57.143 0.00 0.00 0.00 4.11
127 133 4.277258 CAAATGATCATTAGTGCGCAGTC 58.723 43.478 23.41 5.23 0.00 3.51
142 510 1.227031 CCGCGCCAATGCAAATGAT 60.227 52.632 0.00 0.00 37.32 2.45
200 571 2.577059 GGCGTCAACCGGAGATGA 59.423 61.111 9.46 6.88 36.94 2.92
224 595 2.758423 ACAAGCGGGTCTGTTTTTCTTT 59.242 40.909 0.00 0.00 0.00 2.52
255 843 7.234988 AGTTACCCATTGTGACTAGTCTAAGTT 59.765 37.037 23.01 2.69 41.61 2.66
260 848 6.952358 TCTAAGTTACCCATTGTGACTAGTCT 59.048 38.462 23.01 0.19 42.51 3.24
261 849 7.034397 GTCTAAGTTACCCATTGTGACTAGTC 58.966 42.308 16.32 16.32 42.51 2.59
263 851 7.171630 AGTCTAAGTTACCCATTGTGACTAG 57.828 40.000 0.00 0.00 42.51 2.57
264 852 7.892241 ACTAGTCTAAGTTACCCATTGTGACTA 59.108 37.037 0.00 0.00 42.51 2.59
265 853 6.724905 ACTAGTCTAAGTTACCCATTGTGACT 59.275 38.462 0.00 0.00 45.00 3.41
266 854 6.932947 ACTAGTCTAAGTTACCCATTGTGAC 58.067 40.000 0.00 0.00 33.80 3.67
267 855 8.526147 GTTACTAGTCTAAGTTACCCATTGTGA 58.474 37.037 0.00 0.00 0.00 3.58
268 856 8.308931 TGTTACTAGTCTAAGTTACCCATTGTG 58.691 37.037 0.00 0.00 29.93 3.33
269 857 8.426569 TGTTACTAGTCTAAGTTACCCATTGT 57.573 34.615 0.00 0.00 29.93 2.71
270 858 9.314321 CATGTTACTAGTCTAAGTTACCCATTG 57.686 37.037 0.00 0.00 29.93 2.82
271 859 7.985752 GCATGTTACTAGTCTAAGTTACCCATT 59.014 37.037 0.00 0.00 29.93 3.16
272 860 7.125204 TGCATGTTACTAGTCTAAGTTACCCAT 59.875 37.037 0.00 0.00 29.93 4.00
273 861 6.438108 TGCATGTTACTAGTCTAAGTTACCCA 59.562 38.462 0.00 0.00 29.93 4.51
274 862 6.870769 TGCATGTTACTAGTCTAAGTTACCC 58.129 40.000 0.00 0.00 29.93 3.69
301 889 9.964354 TGAAGGTAGTAACATAGACTAGTAACA 57.036 33.333 0.00 0.00 30.08 2.41
303 891 9.964354 TGTGAAGGTAGTAACATAGACTAGTAA 57.036 33.333 0.00 0.00 30.08 2.24
304 892 9.610705 CTGTGAAGGTAGTAACATAGACTAGTA 57.389 37.037 0.00 0.00 30.08 1.82
305 893 8.108364 ACTGTGAAGGTAGTAACATAGACTAGT 58.892 37.037 0.00 0.00 30.08 2.57
306 894 8.399425 CACTGTGAAGGTAGTAACATAGACTAG 58.601 40.741 0.32 0.00 30.08 2.57
307 895 7.338703 CCACTGTGAAGGTAGTAACATAGACTA 59.661 40.741 9.86 0.00 0.00 2.59
308 896 6.153000 CCACTGTGAAGGTAGTAACATAGACT 59.847 42.308 9.86 0.00 0.00 3.24
309 897 6.331061 CCACTGTGAAGGTAGTAACATAGAC 58.669 44.000 9.86 0.00 0.00 2.59
310 898 5.421056 CCCACTGTGAAGGTAGTAACATAGA 59.579 44.000 9.86 0.00 0.00 1.98
311 899 5.187186 ACCCACTGTGAAGGTAGTAACATAG 59.813 44.000 9.86 0.00 30.13 2.23
312 900 5.088730 ACCCACTGTGAAGGTAGTAACATA 58.911 41.667 9.86 0.00 30.13 2.29
313 901 3.908103 ACCCACTGTGAAGGTAGTAACAT 59.092 43.478 9.86 0.00 30.13 2.71
314 902 3.311091 ACCCACTGTGAAGGTAGTAACA 58.689 45.455 9.86 0.00 30.13 2.41
315 903 5.069501 CTACCCACTGTGAAGGTAGTAAC 57.930 47.826 23.95 0.00 45.39 2.50
320 908 4.482030 TGTTACTACCCACTGTGAAGGTA 58.518 43.478 9.86 11.91 35.02 3.08
321 909 3.311091 TGTTACTACCCACTGTGAAGGT 58.689 45.455 9.86 11.38 37.69 3.50
322 910 4.553330 ATGTTACTACCCACTGTGAAGG 57.447 45.455 9.86 5.43 0.00 3.46
323 911 6.640518 ACATATGTTACTACCCACTGTGAAG 58.359 40.000 9.86 6.32 0.00 3.02
324 912 6.614694 ACATATGTTACTACCCACTGTGAA 57.385 37.500 9.86 0.00 0.00 3.18
325 913 6.893554 AGTACATATGTTACTACCCACTGTGA 59.106 38.462 14.77 0.00 0.00 3.58
326 914 6.978659 CAGTACATATGTTACTACCCACTGTG 59.021 42.308 14.77 0.00 0.00 3.66
327 915 6.666546 ACAGTACATATGTTACTACCCACTGT 59.333 38.462 22.30 22.30 38.36 3.55
328 916 6.978659 CACAGTACATATGTTACTACCCACTG 59.021 42.308 21.35 21.35 36.58 3.66
329 917 6.666546 ACACAGTACATATGTTACTACCCACT 59.333 38.462 14.77 5.76 0.00 4.00
330 918 6.870769 ACACAGTACATATGTTACTACCCAC 58.129 40.000 14.77 3.32 0.00 4.61
331 919 6.664384 TGACACAGTACATATGTTACTACCCA 59.336 38.462 14.77 3.16 0.00 4.51
332 920 7.104043 TGACACAGTACATATGTTACTACCC 57.896 40.000 14.77 0.57 0.00 3.69
333 921 7.169308 GCATGACACAGTACATATGTTACTACC 59.831 40.741 14.77 0.00 0.00 3.18
334 922 7.704899 TGCATGACACAGTACATATGTTACTAC 59.295 37.037 14.77 6.01 0.00 2.73
335 923 7.777095 TGCATGACACAGTACATATGTTACTA 58.223 34.615 14.77 0.00 0.00 1.82
336 924 6.639563 TGCATGACACAGTACATATGTTACT 58.360 36.000 14.77 12.03 0.00 2.24
337 925 6.902224 TGCATGACACAGTACATATGTTAC 57.098 37.500 14.77 10.03 0.00 2.50
338 926 7.224557 GTGATGCATGACACAGTACATATGTTA 59.775 37.037 14.77 0.00 37.05 2.41
339 927 6.037500 GTGATGCATGACACAGTACATATGTT 59.962 38.462 14.77 0.00 37.05 2.71
340 928 5.525012 GTGATGCATGACACAGTACATATGT 59.475 40.000 13.93 13.93 37.05 2.29
341 929 5.756833 AGTGATGCATGACACAGTACATATG 59.243 40.000 18.76 0.00 39.18 1.78
342 930 5.922053 AGTGATGCATGACACAGTACATAT 58.078 37.500 18.76 0.00 39.18 1.78
343 931 5.343307 AGTGATGCATGACACAGTACATA 57.657 39.130 18.76 0.00 39.18 2.29
344 932 4.212143 AGTGATGCATGACACAGTACAT 57.788 40.909 18.76 0.00 39.18 2.29
345 933 3.683365 AGTGATGCATGACACAGTACA 57.317 42.857 18.76 0.00 39.18 2.90
346 934 3.996363 TGAAGTGATGCATGACACAGTAC 59.004 43.478 18.76 7.81 39.18 2.73
347 935 4.270245 TGAAGTGATGCATGACACAGTA 57.730 40.909 18.76 2.51 39.18 2.74
348 936 3.130280 TGAAGTGATGCATGACACAGT 57.870 42.857 18.76 6.73 39.18 3.55
349 937 4.696899 AATGAAGTGATGCATGACACAG 57.303 40.909 18.76 0.00 39.18 3.66
350 938 6.762702 ATAAATGAAGTGATGCATGACACA 57.237 33.333 18.76 16.77 39.18 3.72
351 939 7.374228 CGTAATAAATGAAGTGATGCATGACAC 59.626 37.037 18.76 14.04 37.30 3.67
352 940 7.065683 ACGTAATAAATGAAGTGATGCATGACA 59.934 33.333 18.76 1.11 0.00 3.58
353 941 7.409697 ACGTAATAAATGAAGTGATGCATGAC 58.590 34.615 8.39 8.39 0.00 3.06
354 942 7.552458 ACGTAATAAATGAAGTGATGCATGA 57.448 32.000 2.46 0.00 0.00 3.07
355 943 7.697710 ACAACGTAATAAATGAAGTGATGCATG 59.302 33.333 2.46 0.00 0.00 4.06
356 944 7.761409 ACAACGTAATAAATGAAGTGATGCAT 58.239 30.769 0.00 0.00 0.00 3.96
357 945 7.139896 ACAACGTAATAAATGAAGTGATGCA 57.860 32.000 0.00 0.00 0.00 3.96
358 946 8.600625 TCTACAACGTAATAAATGAAGTGATGC 58.399 33.333 0.00 0.00 0.00 3.91
359 947 9.901724 GTCTACAACGTAATAAATGAAGTGATG 57.098 33.333 0.00 0.00 0.00 3.07
360 948 9.871238 AGTCTACAACGTAATAAATGAAGTGAT 57.129 29.630 0.00 0.00 0.00 3.06
361 949 9.350357 GAGTCTACAACGTAATAAATGAAGTGA 57.650 33.333 0.00 0.00 0.00 3.41
362 950 9.135843 TGAGTCTACAACGTAATAAATGAAGTG 57.864 33.333 0.00 0.00 0.00 3.16
363 951 9.871238 ATGAGTCTACAACGTAATAAATGAAGT 57.129 29.630 0.00 0.00 0.00 3.01
372 960 8.926710 CAAGAAAAGATGAGTCTACAACGTAAT 58.073 33.333 0.00 0.00 33.30 1.89
373 961 8.139350 TCAAGAAAAGATGAGTCTACAACGTAA 58.861 33.333 0.00 0.00 33.30 3.18
374 962 7.654568 TCAAGAAAAGATGAGTCTACAACGTA 58.345 34.615 0.00 0.00 33.30 3.57
375 963 6.513180 TCAAGAAAAGATGAGTCTACAACGT 58.487 36.000 0.00 0.00 33.30 3.99
376 964 7.588143 ATCAAGAAAAGATGAGTCTACAACG 57.412 36.000 0.00 0.00 33.30 4.10
382 970 9.730705 TCACAAATATCAAGAAAAGATGAGTCT 57.269 29.630 0.00 0.00 35.82 3.24
402 990 9.366216 CATAGCTAGTTACTGTAACATCACAAA 57.634 33.333 27.12 10.63 41.07 2.83
403 991 8.528643 ACATAGCTAGTTACTGTAACATCACAA 58.471 33.333 27.12 11.94 41.07 3.33
404 992 8.063200 ACATAGCTAGTTACTGTAACATCACA 57.937 34.615 27.12 12.96 41.07 3.58
405 993 8.928270 AACATAGCTAGTTACTGTAACATCAC 57.072 34.615 27.12 15.70 41.07 3.06
407 995 9.460906 GGTAACATAGCTAGTTACTGTAACATC 57.539 37.037 27.12 16.94 46.49 3.06
408 996 8.974238 TGGTAACATAGCTAGTTACTGTAACAT 58.026 33.333 27.12 16.67 46.49 2.71
409 997 8.352137 TGGTAACATAGCTAGTTACTGTAACA 57.648 34.615 27.12 19.73 46.49 2.41
459 1047 9.547753 GTAGGTAAAATAGATGATGTGACATGT 57.452 33.333 1.23 0.00 0.00 3.21
460 1048 9.770097 AGTAGGTAAAATAGATGATGTGACATG 57.230 33.333 1.23 0.00 0.00 3.21
461 1049 9.988815 GAGTAGGTAAAATAGATGATGTGACAT 57.011 33.333 0.00 0.00 0.00 3.06
462 1050 8.421784 GGAGTAGGTAAAATAGATGATGTGACA 58.578 37.037 0.00 0.00 0.00 3.58
463 1051 7.873505 GGGAGTAGGTAAAATAGATGATGTGAC 59.126 40.741 0.00 0.00 0.00 3.67
464 1052 7.789831 AGGGAGTAGGTAAAATAGATGATGTGA 59.210 37.037 0.00 0.00 0.00 3.58
465 1053 7.967908 AGGGAGTAGGTAAAATAGATGATGTG 58.032 38.462 0.00 0.00 0.00 3.21
466 1054 7.235812 GGAGGGAGTAGGTAAAATAGATGATGT 59.764 40.741 0.00 0.00 0.00 3.06
467 1055 7.577807 CGGAGGGAGTAGGTAAAATAGATGATG 60.578 44.444 0.00 0.00 0.00 3.07
468 1056 6.437793 CGGAGGGAGTAGGTAAAATAGATGAT 59.562 42.308 0.00 0.00 0.00 2.45
469 1057 5.773680 CGGAGGGAGTAGGTAAAATAGATGA 59.226 44.000 0.00 0.00 0.00 2.92
470 1058 5.539193 ACGGAGGGAGTAGGTAAAATAGATG 59.461 44.000 0.00 0.00 0.00 2.90
471 1059 5.713807 ACGGAGGGAGTAGGTAAAATAGAT 58.286 41.667 0.00 0.00 0.00 1.98
472 1060 5.103771 AGACGGAGGGAGTAGGTAAAATAGA 60.104 44.000 0.00 0.00 0.00 1.98
473 1061 5.139001 AGACGGAGGGAGTAGGTAAAATAG 58.861 45.833 0.00 0.00 0.00 1.73
474 1062 5.134725 AGACGGAGGGAGTAGGTAAAATA 57.865 43.478 0.00 0.00 0.00 1.40
475 1063 3.991683 AGACGGAGGGAGTAGGTAAAAT 58.008 45.455 0.00 0.00 0.00 1.82
476 1064 3.463048 AGACGGAGGGAGTAGGTAAAA 57.537 47.619 0.00 0.00 0.00 1.52
477 1065 3.117738 CCTAGACGGAGGGAGTAGGTAAA 60.118 52.174 0.00 0.00 32.39 2.01
478 1066 2.441001 CCTAGACGGAGGGAGTAGGTAA 59.559 54.545 0.00 0.00 32.39 2.85
479 1067 2.053244 CCTAGACGGAGGGAGTAGGTA 58.947 57.143 0.00 0.00 32.39 3.08
480 1068 0.845337 CCTAGACGGAGGGAGTAGGT 59.155 60.000 0.00 0.00 32.39 3.08
481 1069 0.845337 ACCTAGACGGAGGGAGTAGG 59.155 60.000 5.42 0.00 41.36 3.18
482 1070 1.489649 TCACCTAGACGGAGGGAGTAG 59.510 57.143 5.42 0.00 41.36 2.57
483 1071 1.489649 CTCACCTAGACGGAGGGAGTA 59.510 57.143 5.42 0.00 41.36 2.59
484 1072 0.256464 CTCACCTAGACGGAGGGAGT 59.744 60.000 5.42 0.00 41.36 3.85
485 1073 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.000 12.80 12.80 41.36 4.30
486 1074 1.588239 TACTCACCTAGACGGAGGGA 58.412 55.000 5.42 0.16 41.36 4.20
487 1075 2.299521 CTTACTCACCTAGACGGAGGG 58.700 57.143 5.42 0.00 41.36 4.30
488 1076 1.677052 GCTTACTCACCTAGACGGAGG 59.323 57.143 0.00 0.00 42.89 4.30
489 1077 1.677052 GGCTTACTCACCTAGACGGAG 59.323 57.143 0.00 0.00 36.31 4.63
490 1078 1.005097 TGGCTTACTCACCTAGACGGA 59.995 52.381 0.00 0.00 36.31 4.69
491 1079 1.471119 TGGCTTACTCACCTAGACGG 58.529 55.000 0.00 0.00 39.35 4.79
492 1080 2.952978 AGATGGCTTACTCACCTAGACG 59.047 50.000 0.00 0.00 0.00 4.18
493 1081 5.828859 TCTAAGATGGCTTACTCACCTAGAC 59.171 44.000 0.00 0.00 35.56 2.59
494 1082 6.014771 TCTAAGATGGCTTACTCACCTAGA 57.985 41.667 0.00 0.00 35.56 2.43
495 1083 6.909550 ATCTAAGATGGCTTACTCACCTAG 57.090 41.667 0.00 0.00 35.56 3.02
496 1084 6.611642 ACAATCTAAGATGGCTTACTCACCTA 59.388 38.462 0.00 0.00 35.56 3.08
497 1085 5.426833 ACAATCTAAGATGGCTTACTCACCT 59.573 40.000 0.00 0.00 35.56 4.00
498 1086 5.525378 CACAATCTAAGATGGCTTACTCACC 59.475 44.000 0.00 0.00 35.56 4.02
499 1087 5.007136 GCACAATCTAAGATGGCTTACTCAC 59.993 44.000 0.00 0.00 35.56 3.51
500 1088 5.118990 GCACAATCTAAGATGGCTTACTCA 58.881 41.667 0.00 0.00 35.56 3.41
501 1089 5.007136 GTGCACAATCTAAGATGGCTTACTC 59.993 44.000 13.17 0.00 35.56 2.59
502 1090 4.878397 GTGCACAATCTAAGATGGCTTACT 59.122 41.667 13.17 0.00 35.56 2.24
503 1091 4.035675 GGTGCACAATCTAAGATGGCTTAC 59.964 45.833 20.43 0.00 35.56 2.34
504 1092 4.199310 GGTGCACAATCTAAGATGGCTTA 58.801 43.478 20.43 0.00 35.56 3.09
505 1093 3.019564 GGTGCACAATCTAAGATGGCTT 58.980 45.455 20.43 0.00 38.15 4.35
506 1094 2.648059 GGTGCACAATCTAAGATGGCT 58.352 47.619 20.43 0.00 0.00 4.75
507 1095 1.331756 CGGTGCACAATCTAAGATGGC 59.668 52.381 20.43 0.00 0.00 4.40
508 1096 2.352651 CACGGTGCACAATCTAAGATGG 59.647 50.000 20.43 0.00 0.00 3.51
509 1097 3.261580 TCACGGTGCACAATCTAAGATG 58.738 45.455 20.43 3.00 0.00 2.90
510 1098 3.610040 TCACGGTGCACAATCTAAGAT 57.390 42.857 20.43 0.00 0.00 2.40
511 1099 3.056179 TGATCACGGTGCACAATCTAAGA 60.056 43.478 20.43 6.51 0.00 2.10
512 1100 3.261580 TGATCACGGTGCACAATCTAAG 58.738 45.455 20.43 2.98 0.00 2.18
513 1101 3.326836 TGATCACGGTGCACAATCTAA 57.673 42.857 20.43 0.00 0.00 2.10
514 1102 3.261580 CTTGATCACGGTGCACAATCTA 58.738 45.455 20.43 10.98 0.00 1.98
515 1103 2.079158 CTTGATCACGGTGCACAATCT 58.921 47.619 20.43 0.00 0.00 2.40
516 1104 1.131126 CCTTGATCACGGTGCACAATC 59.869 52.381 20.43 15.00 0.00 2.67
517 1105 1.167851 CCTTGATCACGGTGCACAAT 58.832 50.000 20.43 6.07 0.00 2.71
518 1106 0.107643 TCCTTGATCACGGTGCACAA 59.892 50.000 20.43 10.69 0.00 3.33
519 1107 0.107643 TTCCTTGATCACGGTGCACA 59.892 50.000 20.43 0.00 0.00 4.57
520 1108 0.798776 CTTCCTTGATCACGGTGCAC 59.201 55.000 17.16 8.80 0.00 4.57
521 1109 0.684535 TCTTCCTTGATCACGGTGCA 59.315 50.000 17.16 3.31 0.00 4.57
522 1110 1.363744 CTCTTCCTTGATCACGGTGC 58.636 55.000 17.16 0.00 0.00 5.01
523 1111 1.406069 CCCTCTTCCTTGATCACGGTG 60.406 57.143 17.16 11.65 0.00 4.94
524 1112 0.905357 CCCTCTTCCTTGATCACGGT 59.095 55.000 17.16 0.00 0.00 4.83
525 1113 0.179000 CCCCTCTTCCTTGATCACGG 59.821 60.000 12.01 12.01 0.00 4.94
526 1114 1.195115 TCCCCTCTTCCTTGATCACG 58.805 55.000 0.00 0.00 0.00 4.35
527 1115 3.721087 TTTCCCCTCTTCCTTGATCAC 57.279 47.619 0.00 0.00 0.00 3.06
528 1116 3.559171 CGTTTTCCCCTCTTCCTTGATCA 60.559 47.826 0.00 0.00 0.00 2.92
529 1117 3.010420 CGTTTTCCCCTCTTCCTTGATC 58.990 50.000 0.00 0.00 0.00 2.92
530 1118 2.642807 TCGTTTTCCCCTCTTCCTTGAT 59.357 45.455 0.00 0.00 0.00 2.57
531 1119 2.038557 CTCGTTTTCCCCTCTTCCTTGA 59.961 50.000 0.00 0.00 0.00 3.02
532 1120 2.038557 TCTCGTTTTCCCCTCTTCCTTG 59.961 50.000 0.00 0.00 0.00 3.61
533 1121 2.303311 CTCTCGTTTTCCCCTCTTCCTT 59.697 50.000 0.00 0.00 0.00 3.36
534 1122 1.903183 CTCTCGTTTTCCCCTCTTCCT 59.097 52.381 0.00 0.00 0.00 3.36
535 1123 1.900486 TCTCTCGTTTTCCCCTCTTCC 59.100 52.381 0.00 0.00 0.00 3.46
536 1124 2.299297 TGTCTCTCGTTTTCCCCTCTTC 59.701 50.000 0.00 0.00 0.00 2.87
537 1125 2.326428 TGTCTCTCGTTTTCCCCTCTT 58.674 47.619 0.00 0.00 0.00 2.85
538 1126 2.011122 TGTCTCTCGTTTTCCCCTCT 57.989 50.000 0.00 0.00 0.00 3.69
539 1127 3.336138 AATGTCTCTCGTTTTCCCCTC 57.664 47.619 0.00 0.00 0.00 4.30
540 1128 4.903045 TTAATGTCTCTCGTTTTCCCCT 57.097 40.909 0.00 0.00 0.00 4.79
541 1129 4.941873 ACATTAATGTCTCTCGTTTTCCCC 59.058 41.667 15.47 0.00 35.87 4.81
542 1130 6.496338 AACATTAATGTCTCTCGTTTTCCC 57.504 37.500 21.02 0.00 40.80 3.97
583 1171 3.181498 TGGTTAGTTCATTGCATGCGATG 60.181 43.478 33.60 33.60 38.77 3.84
584 1172 3.016031 TGGTTAGTTCATTGCATGCGAT 58.984 40.909 15.05 15.05 0.00 4.58
585 1173 2.161410 GTGGTTAGTTCATTGCATGCGA 59.839 45.455 10.79 10.79 0.00 5.10
586 1174 2.162208 AGTGGTTAGTTCATTGCATGCG 59.838 45.455 14.09 0.00 0.00 4.73
587 1175 3.504863 CAGTGGTTAGTTCATTGCATGC 58.495 45.455 11.82 11.82 0.00 4.06
588 1176 3.504863 GCAGTGGTTAGTTCATTGCATG 58.495 45.455 6.68 0.00 44.01 4.06
589 1177 3.855689 GCAGTGGTTAGTTCATTGCAT 57.144 42.857 6.68 0.00 44.01 3.96
591 1179 3.057315 ACATGCAGTGGTTAGTTCATTGC 60.057 43.478 0.00 4.92 44.56 3.56
592 1180 4.456911 AGACATGCAGTGGTTAGTTCATTG 59.543 41.667 0.00 0.00 0.00 2.82
593 1181 4.655963 AGACATGCAGTGGTTAGTTCATT 58.344 39.130 0.00 0.00 0.00 2.57
594 1182 4.292186 AGACATGCAGTGGTTAGTTCAT 57.708 40.909 0.00 0.00 0.00 2.57
595 1183 3.769739 AGACATGCAGTGGTTAGTTCA 57.230 42.857 0.00 0.00 0.00 3.18
596 1184 6.743575 AATAAGACATGCAGTGGTTAGTTC 57.256 37.500 0.00 0.00 0.00 3.01
597 1185 6.490040 ACAAATAAGACATGCAGTGGTTAGTT 59.510 34.615 0.00 0.00 0.00 2.24
598 1186 6.003950 ACAAATAAGACATGCAGTGGTTAGT 58.996 36.000 0.00 0.00 0.00 2.24
599 1187 6.500684 ACAAATAAGACATGCAGTGGTTAG 57.499 37.500 0.00 0.00 0.00 2.34
600 1188 7.165485 ACTACAAATAAGACATGCAGTGGTTA 58.835 34.615 0.00 0.00 0.00 2.85
601 1189 6.003950 ACTACAAATAAGACATGCAGTGGTT 58.996 36.000 0.00 0.00 0.00 3.67
602 1190 5.560724 ACTACAAATAAGACATGCAGTGGT 58.439 37.500 0.00 0.00 0.00 4.16
603 1191 5.877012 AGACTACAAATAAGACATGCAGTGG 59.123 40.000 0.00 0.00 0.00 4.00
604 1192 6.974932 AGACTACAAATAAGACATGCAGTG 57.025 37.500 0.00 0.00 0.00 3.66
605 1193 9.155975 CTTTAGACTACAAATAAGACATGCAGT 57.844 33.333 0.00 0.00 0.00 4.40
606 1194 9.155975 ACTTTAGACTACAAATAAGACATGCAG 57.844 33.333 0.00 0.00 0.00 4.41
607 1195 9.151471 GACTTTAGACTACAAATAAGACATGCA 57.849 33.333 0.00 0.00 0.00 3.96
608 1196 9.151471 TGACTTTAGACTACAAATAAGACATGC 57.849 33.333 0.00 0.00 0.00 4.06
623 1211 8.629158 TGTGCATGTTTTTAATGACTTTAGACT 58.371 29.630 0.00 0.00 0.00 3.24
624 1212 8.690840 GTGTGCATGTTTTTAATGACTTTAGAC 58.309 33.333 0.00 0.00 0.00 2.59
625 1213 7.865385 GGTGTGCATGTTTTTAATGACTTTAGA 59.135 33.333 0.00 0.00 0.00 2.10
626 1214 7.116233 GGGTGTGCATGTTTTTAATGACTTTAG 59.884 37.037 0.00 0.00 0.00 1.85
627 1215 6.926272 GGGTGTGCATGTTTTTAATGACTTTA 59.074 34.615 0.00 0.00 0.00 1.85
628 1216 5.757808 GGGTGTGCATGTTTTTAATGACTTT 59.242 36.000 0.00 0.00 0.00 2.66
629 1217 5.296748 GGGTGTGCATGTTTTTAATGACTT 58.703 37.500 0.00 0.00 0.00 3.01
630 1218 4.262420 GGGGTGTGCATGTTTTTAATGACT 60.262 41.667 0.00 0.00 0.00 3.41
631 1219 3.993736 GGGGTGTGCATGTTTTTAATGAC 59.006 43.478 0.00 0.00 0.00 3.06
632 1220 3.900601 AGGGGTGTGCATGTTTTTAATGA 59.099 39.130 0.00 0.00 0.00 2.57
633 1221 4.244862 GAGGGGTGTGCATGTTTTTAATG 58.755 43.478 0.00 0.00 0.00 1.90
634 1222 3.900601 TGAGGGGTGTGCATGTTTTTAAT 59.099 39.130 0.00 0.00 0.00 1.40
635 1223 3.300388 TGAGGGGTGTGCATGTTTTTAA 58.700 40.909 0.00 0.00 0.00 1.52
636 1224 2.950781 TGAGGGGTGTGCATGTTTTTA 58.049 42.857 0.00 0.00 0.00 1.52
637 1225 1.786937 TGAGGGGTGTGCATGTTTTT 58.213 45.000 0.00 0.00 0.00 1.94
638 1226 1.895131 GATGAGGGGTGTGCATGTTTT 59.105 47.619 0.00 0.00 0.00 2.43
639 1227 1.076024 AGATGAGGGGTGTGCATGTTT 59.924 47.619 0.00 0.00 0.00 2.83
640 1228 0.700564 AGATGAGGGGTGTGCATGTT 59.299 50.000 0.00 0.00 0.00 2.71
641 1229 0.254178 GAGATGAGGGGTGTGCATGT 59.746 55.000 0.00 0.00 0.00 3.21
642 1230 0.545171 AGAGATGAGGGGTGTGCATG 59.455 55.000 0.00 0.00 0.00 4.06
643 1231 1.293062 AAGAGATGAGGGGTGTGCAT 58.707 50.000 0.00 0.00 0.00 3.96
644 1232 1.951209 TAAGAGATGAGGGGTGTGCA 58.049 50.000 0.00 0.00 0.00 4.57
645 1233 3.209410 CAATAAGAGATGAGGGGTGTGC 58.791 50.000 0.00 0.00 0.00 4.57
646 1234 3.200825 ACCAATAAGAGATGAGGGGTGTG 59.799 47.826 0.00 0.00 0.00 3.82
647 1235 3.464828 ACCAATAAGAGATGAGGGGTGT 58.535 45.455 0.00 0.00 0.00 4.16
648 1236 4.080356 TCAACCAATAAGAGATGAGGGGTG 60.080 45.833 0.00 0.00 32.98 4.61
649 1237 4.111577 TCAACCAATAAGAGATGAGGGGT 58.888 43.478 0.00 0.00 0.00 4.95
650 1238 4.778213 TCAACCAATAAGAGATGAGGGG 57.222 45.455 0.00 0.00 0.00 4.79
651 1239 7.456725 ACATATCAACCAATAAGAGATGAGGG 58.543 38.462 0.00 0.00 35.26 4.30
652 1240 8.152898 TGACATATCAACCAATAAGAGATGAGG 58.847 37.037 0.00 0.00 35.26 3.86
653 1241 9.551734 TTGACATATCAACCAATAAGAGATGAG 57.448 33.333 0.00 0.00 40.01 2.90
654 1242 9.551734 CTTGACATATCAACCAATAAGAGATGA 57.448 33.333 0.00 0.00 40.01 2.92
655 1243 9.551734 TCTTGACATATCAACCAATAAGAGATG 57.448 33.333 0.00 0.00 40.01 2.90
657 1245 9.958180 TTTCTTGACATATCAACCAATAAGAGA 57.042 29.630 0.00 0.00 40.01 3.10
658 1246 9.994432 GTTTCTTGACATATCAACCAATAAGAG 57.006 33.333 0.00 0.00 40.01 2.85
659 1247 9.513906 TGTTTCTTGACATATCAACCAATAAGA 57.486 29.630 0.00 0.00 40.01 2.10
662 1250 9.513906 TCTTGTTTCTTGACATATCAACCAATA 57.486 29.630 0.00 0.00 40.01 1.90
663 1251 8.408043 TCTTGTTTCTTGACATATCAACCAAT 57.592 30.769 0.00 0.00 40.01 3.16
664 1252 7.815840 TCTTGTTTCTTGACATATCAACCAA 57.184 32.000 0.00 0.00 40.01 3.67
665 1253 7.815840 TTCTTGTTTCTTGACATATCAACCA 57.184 32.000 0.00 0.00 40.01 3.67
666 1254 7.323656 CGTTTCTTGTTTCTTGACATATCAACC 59.676 37.037 0.00 0.00 40.01 3.77
667 1255 8.067784 TCGTTTCTTGTTTCTTGACATATCAAC 58.932 33.333 0.00 0.00 40.01 3.18
668 1256 8.148807 TCGTTTCTTGTTTCTTGACATATCAA 57.851 30.769 0.00 0.00 42.73 2.57
669 1257 7.095229 CCTCGTTTCTTGTTTCTTGACATATCA 60.095 37.037 0.00 0.00 0.00 2.15
670 1258 7.095187 ACCTCGTTTCTTGTTTCTTGACATATC 60.095 37.037 0.00 0.00 0.00 1.63
671 1259 6.710744 ACCTCGTTTCTTGTTTCTTGACATAT 59.289 34.615 0.00 0.00 0.00 1.78
672 1260 6.053005 ACCTCGTTTCTTGTTTCTTGACATA 58.947 36.000 0.00 0.00 0.00 2.29
673 1261 4.881850 ACCTCGTTTCTTGTTTCTTGACAT 59.118 37.500 0.00 0.00 0.00 3.06
674 1262 4.258543 ACCTCGTTTCTTGTTTCTTGACA 58.741 39.130 0.00 0.00 0.00 3.58
675 1263 4.877323 ACCTCGTTTCTTGTTTCTTGAC 57.123 40.909 0.00 0.00 0.00 3.18
676 1264 5.909477 TCTACCTCGTTTCTTGTTTCTTGA 58.091 37.500 0.00 0.00 0.00 3.02
677 1265 6.258068 ACTTCTACCTCGTTTCTTGTTTCTTG 59.742 38.462 0.00 0.00 0.00 3.02
678 1266 6.346896 ACTTCTACCTCGTTTCTTGTTTCTT 58.653 36.000 0.00 0.00 0.00 2.52
679 1267 5.915175 ACTTCTACCTCGTTTCTTGTTTCT 58.085 37.500 0.00 0.00 0.00 2.52
680 1268 6.600246 AACTTCTACCTCGTTTCTTGTTTC 57.400 37.500 0.00 0.00 0.00 2.78
681 1269 7.226128 CCTTAACTTCTACCTCGTTTCTTGTTT 59.774 37.037 0.00 0.00 0.00 2.83
682 1270 6.704937 CCTTAACTTCTACCTCGTTTCTTGTT 59.295 38.462 0.00 0.00 0.00 2.83
683 1271 6.221659 CCTTAACTTCTACCTCGTTTCTTGT 58.778 40.000 0.00 0.00 0.00 3.16
684 1272 5.120363 GCCTTAACTTCTACCTCGTTTCTTG 59.880 44.000 0.00 0.00 0.00 3.02
685 1273 5.221581 TGCCTTAACTTCTACCTCGTTTCTT 60.222 40.000 0.00 0.00 0.00 2.52
686 1274 4.282703 TGCCTTAACTTCTACCTCGTTTCT 59.717 41.667 0.00 0.00 0.00 2.52
687 1275 4.388165 GTGCCTTAACTTCTACCTCGTTTC 59.612 45.833 0.00 0.00 0.00 2.78
688 1276 4.313282 GTGCCTTAACTTCTACCTCGTTT 58.687 43.478 0.00 0.00 0.00 3.60
689 1277 3.306571 GGTGCCTTAACTTCTACCTCGTT 60.307 47.826 0.00 0.00 0.00 3.85
690 1278 2.233186 GGTGCCTTAACTTCTACCTCGT 59.767 50.000 0.00 0.00 0.00 4.18
691 1279 2.734492 CGGTGCCTTAACTTCTACCTCG 60.734 54.545 0.00 0.00 0.00 4.63
692 1280 2.889852 CGGTGCCTTAACTTCTACCTC 58.110 52.381 0.00 0.00 0.00 3.85
693 1281 1.066358 GCGGTGCCTTAACTTCTACCT 60.066 52.381 0.00 0.00 0.00 3.08
694 1282 1.366679 GCGGTGCCTTAACTTCTACC 58.633 55.000 0.00 0.00 0.00 3.18
695 1283 0.997196 CGCGGTGCCTTAACTTCTAC 59.003 55.000 0.00 0.00 0.00 2.59
696 1284 0.738412 GCGCGGTGCCTTAACTTCTA 60.738 55.000 8.83 0.00 37.76 2.10
697 1285 2.033194 GCGCGGTGCCTTAACTTCT 61.033 57.895 8.83 0.00 37.76 2.85
698 1286 2.479198 GCGCGGTGCCTTAACTTC 59.521 61.111 8.83 0.00 37.76 3.01
707 1295 2.125202 AAAACACTTAGGCGCGGTGC 62.125 55.000 8.83 4.64 45.38 5.01
708 1296 1.127951 CTAAAACACTTAGGCGCGGTG 59.872 52.381 8.83 9.75 37.05 4.94
709 1297 1.435577 CTAAAACACTTAGGCGCGGT 58.564 50.000 8.83 0.00 0.00 5.68
710 1298 0.725117 CCTAAAACACTTAGGCGCGG 59.275 55.000 8.83 0.00 35.60 6.46
711 1299 1.717194 TCCTAAAACACTTAGGCGCG 58.283 50.000 0.00 0.00 40.97 6.86
712 1300 6.373186 AATAATCCTAAAACACTTAGGCGC 57.627 37.500 0.00 0.00 40.97 6.53
713 1301 7.148137 ACCAAATAATCCTAAAACACTTAGGCG 60.148 37.037 5.79 0.00 40.97 5.52
714 1302 8.063200 ACCAAATAATCCTAAAACACTTAGGC 57.937 34.615 5.79 0.00 40.97 3.93
734 1322 9.126151 TGTGTAAGTCATCTTATGAAAACCAAA 57.874 29.630 0.00 0.00 41.69 3.28
735 1323 8.564574 GTGTGTAAGTCATCTTATGAAAACCAA 58.435 33.333 0.00 0.00 41.69 3.67
736 1324 7.174253 GGTGTGTAAGTCATCTTATGAAAACCA 59.826 37.037 0.00 0.00 41.69 3.67
737 1325 7.390718 AGGTGTGTAAGTCATCTTATGAAAACC 59.609 37.037 0.00 0.00 41.69 3.27
738 1326 8.324163 AGGTGTGTAAGTCATCTTATGAAAAC 57.676 34.615 0.00 0.00 41.69 2.43
739 1327 9.431887 GTAGGTGTGTAAGTCATCTTATGAAAA 57.568 33.333 0.00 0.00 41.69 2.29
740 1328 8.590204 TGTAGGTGTGTAAGTCATCTTATGAAA 58.410 33.333 0.00 0.00 41.69 2.69
741 1329 8.033038 GTGTAGGTGTGTAAGTCATCTTATGAA 58.967 37.037 0.00 0.00 41.69 2.57
742 1330 7.544622 GTGTAGGTGTGTAAGTCATCTTATGA 58.455 38.462 0.00 0.00 38.25 2.15
743 1331 6.472486 CGTGTAGGTGTGTAAGTCATCTTATG 59.528 42.308 0.00 0.00 38.25 1.90
744 1332 6.405508 CCGTGTAGGTGTGTAAGTCATCTTAT 60.406 42.308 0.00 0.00 35.59 1.73
745 1333 5.106038 CCGTGTAGGTGTGTAAGTCATCTTA 60.106 44.000 0.00 0.00 33.66 2.10
746 1334 4.321750 CCGTGTAGGTGTGTAAGTCATCTT 60.322 45.833 0.00 0.00 35.02 2.40
747 1335 3.192844 CCGTGTAGGTGTGTAAGTCATCT 59.807 47.826 0.00 0.00 34.51 2.90
748 1336 3.192001 TCCGTGTAGGTGTGTAAGTCATC 59.808 47.826 0.00 0.00 41.99 2.92
749 1337 3.159472 TCCGTGTAGGTGTGTAAGTCAT 58.841 45.455 0.00 0.00 41.99 3.06
750 1338 2.555325 CTCCGTGTAGGTGTGTAAGTCA 59.445 50.000 0.00 0.00 41.99 3.41
751 1339 2.094854 CCTCCGTGTAGGTGTGTAAGTC 60.095 54.545 0.00 0.00 41.99 3.01
752 1340 1.891150 CCTCCGTGTAGGTGTGTAAGT 59.109 52.381 0.00 0.00 41.99 2.24
753 1341 1.203994 CCCTCCGTGTAGGTGTGTAAG 59.796 57.143 0.00 0.00 41.99 2.34
754 1342 1.203038 TCCCTCCGTGTAGGTGTGTAA 60.203 52.381 0.00 0.00 41.99 2.41
755 1343 0.405198 TCCCTCCGTGTAGGTGTGTA 59.595 55.000 0.00 0.00 41.99 2.90
756 1344 0.898789 CTCCCTCCGTGTAGGTGTGT 60.899 60.000 0.00 0.00 41.99 3.72
757 1345 0.898789 ACTCCCTCCGTGTAGGTGTG 60.899 60.000 0.00 0.00 41.99 3.82
758 1346 0.700564 TACTCCCTCCGTGTAGGTGT 59.299 55.000 0.00 0.00 41.99 4.16
759 1347 1.064906 TCTACTCCCTCCGTGTAGGTG 60.065 57.143 0.00 0.00 38.53 4.00
760 1348 1.293062 TCTACTCCCTCCGTGTAGGT 58.707 55.000 0.00 0.00 38.53 3.08
761 1349 2.660670 ATCTACTCCCTCCGTGTAGG 57.339 55.000 0.00 0.00 38.53 3.18
762 1350 4.515944 CACTTATCTACTCCCTCCGTGTAG 59.484 50.000 0.00 0.00 39.09 2.74
763 1351 4.080129 ACACTTATCTACTCCCTCCGTGTA 60.080 45.833 0.00 0.00 32.03 2.90
764 1352 3.288964 CACTTATCTACTCCCTCCGTGT 58.711 50.000 0.00 0.00 0.00 4.49
765 1353 3.066900 CACACTTATCTACTCCCTCCGTG 59.933 52.174 0.00 0.00 0.00 4.94
766 1354 3.053842 TCACACTTATCTACTCCCTCCGT 60.054 47.826 0.00 0.00 0.00 4.69
767 1355 3.552875 TCACACTTATCTACTCCCTCCG 58.447 50.000 0.00 0.00 0.00 4.63
768 1356 4.896482 ACATCACACTTATCTACTCCCTCC 59.104 45.833 0.00 0.00 0.00 4.30
769 1357 6.472686 AACATCACACTTATCTACTCCCTC 57.527 41.667 0.00 0.00 0.00 4.30
770 1358 6.324254 GGTAACATCACACTTATCTACTCCCT 59.676 42.308 0.00 0.00 0.00 4.20
771 1359 6.097839 TGGTAACATCACACTTATCTACTCCC 59.902 42.308 0.00 0.00 46.17 4.30
772 1360 7.108841 TGGTAACATCACACTTATCTACTCC 57.891 40.000 0.00 0.00 46.17 3.85
790 1378 6.342338 AGTGGGAGTAATATCGATGGTAAC 57.658 41.667 8.54 1.14 0.00 2.50
791 1379 7.123697 CCATAGTGGGAGTAATATCGATGGTAA 59.876 40.741 8.54 0.00 32.67 2.85
792 1380 6.605995 CCATAGTGGGAGTAATATCGATGGTA 59.394 42.308 8.54 0.00 32.67 3.25
793 1381 5.422331 CCATAGTGGGAGTAATATCGATGGT 59.578 44.000 8.54 0.00 32.67 3.55
794 1382 5.907207 CCATAGTGGGAGTAATATCGATGG 58.093 45.833 8.54 0.00 32.67 3.51
810 1398 4.223953 AGACTACCCACATACCCATAGTG 58.776 47.826 0.00 0.00 0.00 2.74
811 1399 4.554553 AGACTACCCACATACCCATAGT 57.445 45.455 0.00 0.00 0.00 2.12
812 1400 5.245526 GGTAAGACTACCCACATACCCATAG 59.754 48.000 0.00 0.00 41.77 2.23
813 1401 5.149976 GGTAAGACTACCCACATACCCATA 58.850 45.833 0.00 0.00 41.77 2.74
814 1402 3.971971 GGTAAGACTACCCACATACCCAT 59.028 47.826 0.00 0.00 41.77 4.00
815 1403 3.377573 GGTAAGACTACCCACATACCCA 58.622 50.000 0.00 0.00 41.77 4.51
825 1413 7.177744 TGGATTTCAAATTTGGGTAAGACTACC 59.822 37.037 17.90 8.53 46.24 3.18
826 1414 8.117813 TGGATTTCAAATTTGGGTAAGACTAC 57.882 34.615 17.90 0.53 0.00 2.73
827 1415 8.713708 TTGGATTTCAAATTTGGGTAAGACTA 57.286 30.769 17.90 5.05 31.46 2.59
828 1416 7.610580 TTGGATTTCAAATTTGGGTAAGACT 57.389 32.000 17.90 0.00 31.46 3.24
829 1417 7.549134 GGATTGGATTTCAAATTTGGGTAAGAC 59.451 37.037 17.90 7.86 39.05 3.01
830 1418 7.236432 TGGATTGGATTTCAAATTTGGGTAAGA 59.764 33.333 17.90 0.00 39.05 2.10
831 1419 7.334171 GTGGATTGGATTTCAAATTTGGGTAAG 59.666 37.037 17.90 0.00 39.05 2.34
832 1420 7.017056 AGTGGATTGGATTTCAAATTTGGGTAA 59.983 33.333 17.90 10.28 39.05 2.85
833 1421 6.500049 AGTGGATTGGATTTCAAATTTGGGTA 59.500 34.615 17.90 4.54 39.05 3.69
834 1422 5.310331 AGTGGATTGGATTTCAAATTTGGGT 59.690 36.000 17.90 4.64 39.05 4.51
835 1423 5.807909 AGTGGATTGGATTTCAAATTTGGG 58.192 37.500 17.90 0.00 39.05 4.12
836 1424 6.711645 ACAAGTGGATTGGATTTCAAATTTGG 59.288 34.615 17.90 0.12 43.68 3.28
901 1493 1.183549 GAGGGACCTAGTCAAAGCGA 58.816 55.000 0.00 0.00 33.68 4.93
1087 1714 0.863686 AGGAGGGGTAGGGGTAGGTT 60.864 60.000 0.00 0.00 0.00 3.50
1098 1725 2.204705 AGGAGGAGGAGGAGGGGT 60.205 66.667 0.00 0.00 0.00 4.95
1100 1727 2.018086 AGGAGGAGGAGGAGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
2003 2700 1.376466 GTGAGGTGATGGTGGTGCT 59.624 57.895 0.00 0.00 0.00 4.40
2334 3044 2.505118 GTGACGACGAGGCTCTGC 60.505 66.667 13.50 3.17 0.00 4.26
2772 3678 4.595116 CACAAGCAAGAACAGAAGTTGAG 58.405 43.478 0.00 0.00 38.30 3.02
2785 3691 5.176223 CAGGAACAAAATTAGCACAAGCAAG 59.824 40.000 0.00 0.00 45.49 4.01
2954 3918 2.422597 CAGTAAGTTTGTGGCATCGGA 58.577 47.619 0.00 0.00 0.00 4.55
3257 4827 4.499183 AGAGTTTCAGTAAAGGCTGATCG 58.501 43.478 0.00 0.00 43.99 3.69
3325 5042 9.193806 ACATTTCTGTCATAAGCTGGAATTTAT 57.806 29.630 0.00 0.00 0.00 1.40
3473 5278 5.500645 AGCAACCAACAGAAACTAACTTC 57.499 39.130 0.00 0.00 0.00 3.01
3599 5443 6.017605 CAGGATAAGTAAAGACCATGCATGAC 60.018 42.308 28.31 19.71 0.00 3.06
3616 5461 3.381908 AGCGAGTGAGGTAACAGGATAAG 59.618 47.826 0.00 0.00 41.41 1.73
3648 5529 2.172505 TGTTTCTCTGCACCTCCTTTCA 59.827 45.455 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.