Multiple sequence alignment - TraesCS5B01G045200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G045200 chr5B 100.000 7445 0 0 1 7445 50517417 50509973 0.000000e+00 13749.0
1 TraesCS5B01G045200 chr5B 92.556 2109 142 5 1108 3202 130934946 130932839 0.000000e+00 3011.0
2 TraesCS5B01G045200 chr5B 86.825 1389 107 42 5453 6790 130916291 130914928 0.000000e+00 1482.0
3 TraesCS5B01G045200 chr5B 89.225 1123 70 23 3795 4893 130918385 130917290 0.000000e+00 1356.0
4 TraesCS5B01G045200 chr5B 87.129 707 68 14 408 1111 130935664 130934978 0.000000e+00 780.0
5 TraesCS5B01G045200 chr5B 84.927 617 62 16 3204 3797 130931025 130930417 4.970000e-166 595.0
6 TraesCS5B01G045200 chr5B 89.398 415 38 6 6943 7355 562483427 562483017 1.110000e-142 518.0
7 TraesCS5B01G045200 chr5B 80.115 523 57 24 527 1011 224436995 224436482 5.530000e-91 346.0
8 TraesCS5B01G045200 chr5B 85.185 297 42 1 4591 4887 454124422 454124716 3.380000e-78 303.0
9 TraesCS5B01G045200 chr5B 89.381 113 7 5 6833 6941 130914929 130914818 3.620000e-28 137.0
10 TraesCS5B01G045200 chr5A 93.793 6412 300 48 433 6777 37981242 37974862 0.000000e+00 9546.0
11 TraesCS5B01G045200 chr5A 91.418 2482 170 17 1108 3558 128440358 128437889 0.000000e+00 3363.0
12 TraesCS5B01G045200 chr5A 90.366 1256 92 20 5365 6607 128431999 128430760 0.000000e+00 1622.0
13 TraesCS5B01G045200 chr5A 90.142 1055 82 12 3900 4943 128433806 128432763 0.000000e+00 1352.0
14 TraesCS5B01G045200 chr5A 83.350 1003 119 31 122 1114 128441352 128440388 0.000000e+00 883.0
15 TraesCS5B01G045200 chr5A 85.522 297 41 1 4591 4887 343202990 343203284 7.250000e-80 309.0
16 TraesCS5B01G045200 chr5A 93.296 179 10 2 3620 3797 128437036 128436859 5.730000e-66 263.0
17 TraesCS5B01G045200 chr5A 86.977 215 16 7 129 340 37981522 37981317 1.620000e-56 231.0
18 TraesCS5B01G045200 chr5A 90.728 151 14 0 5021 5171 128432423 128432273 1.270000e-47 202.0
19 TraesCS5B01G045200 chr5A 92.593 108 5 3 6834 6938 128430528 128430421 1.290000e-32 152.0
20 TraesCS5B01G045200 chr5A 91.346 104 6 3 3795 3897 128433993 128433892 1.010000e-28 139.0
21 TraesCS5B01G045200 chr5A 89.189 111 10 1 6696 6806 37972183 37972075 3.620000e-28 137.0
22 TraesCS5B01G045200 chr5A 93.548 62 4 0 5068 5129 343203388 343203449 7.950000e-15 93.5
23 TraesCS5B01G045200 chr5D 95.401 4718 166 28 91 4783 47864454 47859763 0.000000e+00 7463.0
24 TraesCS5B01G045200 chr5D 91.072 2733 185 26 1108 3797 118847619 118844903 0.000000e+00 3640.0
25 TraesCS5B01G045200 chr5D 90.335 2059 122 32 4810 6806 47859769 47857726 0.000000e+00 2628.0
26 TraesCS5B01G045200 chr5D 89.976 1227 91 21 5365 6579 118840300 118839094 0.000000e+00 1555.0
27 TraesCS5B01G045200 chr5D 88.999 1209 87 20 3795 4981 118841888 118840704 0.000000e+00 1454.0
28 TraesCS5B01G045200 chr5D 83.061 980 118 31 143 1111 118848594 118847652 0.000000e+00 846.0
29 TraesCS5B01G045200 chr5D 85.536 560 61 9 6058 6612 47852503 47851959 1.080000e-157 568.0
30 TraesCS5B01G045200 chr5D 91.525 413 31 4 6943 7354 106986659 106987068 3.900000e-157 566.0
31 TraesCS5B01G045200 chr5D 91.367 139 12 0 5033 5171 118840705 118840567 2.740000e-44 191.0
32 TraesCS5B01G045200 chr5D 92.593 108 5 3 6834 6938 118838842 118838735 1.290000e-32 152.0
33 TraesCS5B01G045200 chr2D 86.767 2728 256 49 2504 5178 8499854 8497179 0.000000e+00 2940.0
34 TraesCS5B01G045200 chr2D 89.014 2139 176 33 496 2586 8502061 8499934 0.000000e+00 2593.0
35 TraesCS5B01G045200 chr2D 85.054 1211 119 34 5308 6465 8497180 8495979 0.000000e+00 1177.0
36 TraesCS5B01G045200 chr2D 85.686 510 56 10 4678 5176 103476048 103476551 8.560000e-144 521.0
37 TraesCS5B01G045200 chr2D 92.308 39 3 0 5350 5388 103476583 103476621 1.000000e-03 56.5
38 TraesCS5B01G045200 chr2B 87.039 2523 240 41 2504 4981 11291147 11288667 0.000000e+00 2767.0
39 TraesCS5B01G045200 chr2B 88.265 2156 174 38 496 2586 11293368 11291227 0.000000e+00 2507.0
40 TraesCS5B01G045200 chr2B 85.981 1234 120 32 5308 6501 11288155 11286935 0.000000e+00 1271.0
41 TraesCS5B01G045200 chr2A 86.542 2504 240 45 2504 4962 7549388 7546937 0.000000e+00 2667.0
42 TraesCS5B01G045200 chr2A 87.494 2175 172 50 496 2586 7551707 7549549 0.000000e+00 2418.0
43 TraesCS5B01G045200 chr2A 84.709 1236 137 29 5308 6499 7546493 7545266 0.000000e+00 1188.0
44 TraesCS5B01G045200 chr2A 92.969 128 8 1 5021 5147 7546631 7546504 1.280000e-42 185.0
45 TraesCS5B01G045200 chr2A 95.890 73 3 0 7373 7445 90066060 90066132 1.310000e-22 119.0
46 TraesCS5B01G045200 chr2A 94.521 73 4 0 7373 7445 753742866 753742794 6.110000e-21 113.0
47 TraesCS5B01G045200 chr2A 95.000 60 3 0 5070 5129 192621424 192621483 2.210000e-15 95.3
48 TraesCS5B01G045200 chr7D 84.811 1297 115 28 1658 2932 6012026 6010790 0.000000e+00 1229.0
49 TraesCS5B01G045200 chr7D 88.936 714 62 7 1046 1756 6013045 6012346 0.000000e+00 865.0
50 TraesCS5B01G045200 chr7D 95.890 73 3 0 7373 7445 539828893 539828965 1.310000e-22 119.0
51 TraesCS5B01G045200 chr6A 91.727 411 31 3 6944 7353 172348258 172348666 1.080000e-157 568.0
52 TraesCS5B01G045200 chr6A 82.432 148 19 4 5168 5308 13742734 13742881 1.010000e-23 122.0
53 TraesCS5B01G045200 chr6A 95.890 73 3 0 7373 7445 599803258 599803186 1.310000e-22 119.0
54 TraesCS5B01G045200 chr4A 91.505 412 31 4 6944 7354 446616884 446617292 1.400000e-156 564.0
55 TraesCS5B01G045200 chr4A 90.534 412 35 4 6944 7354 718481429 718481021 6.570000e-150 542.0
56 TraesCS5B01G045200 chr4A 84.028 144 15 7 5166 5302 426000813 426000955 1.690000e-26 132.0
57 TraesCS5B01G045200 chr7B 91.262 412 32 4 6944 7354 673675638 673675230 6.520000e-155 558.0
58 TraesCS5B01G045200 chr7B 86.047 129 12 2 5180 5302 453623440 453623312 4.690000e-27 134.0
59 TraesCS5B01G045200 chr1B 91.019 412 33 4 6944 7354 490445212 490444804 3.040000e-153 553.0
60 TraesCS5B01G045200 chr1B 90.049 412 36 5 6944 7354 651496236 651495829 5.120000e-146 529.0
61 TraesCS5B01G045200 chr3B 90.909 396 32 4 6944 7338 747750804 747750412 5.120000e-146 529.0
62 TraesCS5B01G045200 chr6D 80.784 536 54 26 516 1011 4871929 4871403 2.540000e-99 374.0
63 TraesCS5B01G045200 chrUn 80.115 523 57 24 527 1011 62879838 62879325 5.530000e-91 346.0
64 TraesCS5B01G045200 chrUn 87.786 131 12 2 5176 5302 27074550 27074420 4.650000e-32 150.0
65 TraesCS5B01G045200 chr1A 86.713 286 34 3 4602 4886 204832767 204832485 1.560000e-81 315.0
66 TraesCS5B01G045200 chr6B 84.669 287 38 5 4602 4887 310222262 310222543 1.580000e-71 281.0
67 TraesCS5B01G045200 chr6B 85.271 129 16 1 5176 5301 82006086 82005958 6.060000e-26 130.0
68 TraesCS5B01G045200 chr6B 83.453 139 17 6 5168 5302 22724140 22724276 2.820000e-24 124.0
69 TraesCS5B01G045200 chr4B 83.217 143 17 6 5166 5302 159632822 159632963 2.820000e-24 124.0
70 TraesCS5B01G045200 chr3D 97.260 73 2 0 7373 7445 67012241 67012313 2.820000e-24 124.0
71 TraesCS5B01G045200 chr3A 95.890 73 3 0 7373 7445 686788649 686788721 1.310000e-22 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G045200 chr5B 50509973 50517417 7444 True 13749.000000 13749 100.000000 1 7445 1 chr5B.!!$R1 7444
1 TraesCS5B01G045200 chr5B 130930417 130935664 5247 True 1462.000000 3011 88.204000 408 3797 3 chr5B.!!$R5 3389
2 TraesCS5B01G045200 chr5B 130914818 130918385 3567 True 991.666667 1482 88.477000 3795 6941 3 chr5B.!!$R4 3146
3 TraesCS5B01G045200 chr5B 224436482 224436995 513 True 346.000000 346 80.115000 527 1011 1 chr5B.!!$R2 484
4 TraesCS5B01G045200 chr5A 37972075 37981522 9447 True 3304.666667 9546 89.986333 129 6806 3 chr5A.!!$R1 6677
5 TraesCS5B01G045200 chr5A 128430421 128441352 10931 True 997.000000 3363 90.404875 122 6938 8 chr5A.!!$R2 6816
6 TraesCS5B01G045200 chr5D 47857726 47864454 6728 True 5045.500000 7463 92.868000 91 6806 2 chr5D.!!$R2 6715
7 TraesCS5B01G045200 chr5D 118838735 118848594 9859 True 1306.333333 3640 89.511333 143 6938 6 chr5D.!!$R3 6795
8 TraesCS5B01G045200 chr5D 47851959 47852503 544 True 568.000000 568 85.536000 6058 6612 1 chr5D.!!$R1 554
9 TraesCS5B01G045200 chr2D 8495979 8502061 6082 True 2236.666667 2940 86.945000 496 6465 3 chr2D.!!$R1 5969
10 TraesCS5B01G045200 chr2D 103476048 103476621 573 False 288.750000 521 88.997000 4678 5388 2 chr2D.!!$F1 710
11 TraesCS5B01G045200 chr2B 11286935 11293368 6433 True 2181.666667 2767 87.095000 496 6501 3 chr2B.!!$R1 6005
12 TraesCS5B01G045200 chr2A 7545266 7551707 6441 True 1614.500000 2667 87.928500 496 6499 4 chr2A.!!$R2 6003
13 TraesCS5B01G045200 chr7D 6010790 6013045 2255 True 1047.000000 1229 86.873500 1046 2932 2 chr7D.!!$R1 1886
14 TraesCS5B01G045200 chr6D 4871403 4871929 526 True 374.000000 374 80.784000 516 1011 1 chr6D.!!$R1 495
15 TraesCS5B01G045200 chrUn 62879325 62879838 513 True 346.000000 346 80.115000 527 1011 1 chrUn.!!$R2 484

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.179163 CTTCTGAAAATTCGCCCCGC 60.179 55.000 0.00 0.00 0.00 6.13 F
365 451 0.446616 GGTTTGCTCGGTTCCGATTC 59.553 55.000 14.34 9.88 37.83 2.52 F
1609 1842 0.689745 TCTGGGGGATCCTTGGTACG 60.690 60.000 12.58 0.00 36.20 3.67 F
2333 2975 3.065925 GCAGTCTTCAGAAAAGTTGCTGT 59.934 43.478 0.00 0.00 33.90 4.40 F
3872 10563 0.036732 TCCCACATGCTGTTGGAGAC 59.963 55.000 1.70 0.00 37.28 3.36 F
5394 12963 0.608856 TGCTAACCATGCCACACCAG 60.609 55.000 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1609 1842 0.031178 CAGCCTGCTTGGTTTGTGAC 59.969 55.000 0.00 0.00 38.35 3.67 R
2333 2975 1.691976 ACCTTCATTCAGTGTCGTGGA 59.308 47.619 0.00 0.00 0.00 4.02 R
2460 3103 0.698238 TGCTTTATGTGCCTGAGGGT 59.302 50.000 0.00 0.00 34.45 4.34 R
4063 10859 3.116531 GCGAAGGTAAGCGCCGTT 61.117 61.111 2.29 0.00 46.93 4.44 R
5405 12974 0.320421 GCGACTAGCCTGGTCAAACA 60.320 55.000 9.01 0.00 40.81 2.83 R
7300 15228 0.033366 ACGGCAACAATTGAAAGGGC 59.967 50.000 13.59 9.29 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.645730 CTCTCTTCGACACCCTTCTG 57.354 55.000 0.00 0.00 0.00 3.02
20 21 2.163509 CTCTCTTCGACACCCTTCTGA 58.836 52.381 0.00 0.00 0.00 3.27
21 22 2.558795 CTCTCTTCGACACCCTTCTGAA 59.441 50.000 0.00 0.00 0.00 3.02
22 23 2.963101 TCTCTTCGACACCCTTCTGAAA 59.037 45.455 0.00 0.00 0.00 2.69
23 24 3.386726 TCTCTTCGACACCCTTCTGAAAA 59.613 43.478 0.00 0.00 0.00 2.29
24 25 4.040461 TCTCTTCGACACCCTTCTGAAAAT 59.960 41.667 0.00 0.00 0.00 1.82
25 26 4.714632 TCTTCGACACCCTTCTGAAAATT 58.285 39.130 0.00 0.00 0.00 1.82
26 27 4.755123 TCTTCGACACCCTTCTGAAAATTC 59.245 41.667 0.00 0.00 0.00 2.17
27 28 3.064207 TCGACACCCTTCTGAAAATTCG 58.936 45.455 0.00 0.00 0.00 3.34
28 29 2.412847 CGACACCCTTCTGAAAATTCGC 60.413 50.000 0.00 0.00 0.00 4.70
29 30 1.886542 ACACCCTTCTGAAAATTCGCC 59.113 47.619 0.00 0.00 0.00 5.54
30 31 1.202348 CACCCTTCTGAAAATTCGCCC 59.798 52.381 0.00 0.00 0.00 6.13
31 32 0.817654 CCCTTCTGAAAATTCGCCCC 59.182 55.000 0.00 0.00 0.00 5.80
32 33 0.451783 CCTTCTGAAAATTCGCCCCG 59.548 55.000 0.00 0.00 0.00 5.73
33 34 0.179163 CTTCTGAAAATTCGCCCCGC 60.179 55.000 0.00 0.00 0.00 6.13
53 54 4.109675 CCCGCCCCCTCACGAAAT 62.110 66.667 0.00 0.00 0.00 2.17
54 55 2.513897 CCGCCCCCTCACGAAATC 60.514 66.667 0.00 0.00 0.00 2.17
55 56 2.513897 CGCCCCCTCACGAAATCC 60.514 66.667 0.00 0.00 0.00 3.01
56 57 2.124278 GCCCCCTCACGAAATCCC 60.124 66.667 0.00 0.00 0.00 3.85
57 58 2.595655 CCCCCTCACGAAATCCCC 59.404 66.667 0.00 0.00 0.00 4.81
58 59 2.595655 CCCCTCACGAAATCCCCC 59.404 66.667 0.00 0.00 0.00 5.40
74 75 4.167838 CCCCTACGGCCCTACCCT 62.168 72.222 0.00 0.00 33.26 4.34
75 76 2.782417 CCCCTACGGCCCTACCCTA 61.782 68.421 0.00 0.00 33.26 3.53
76 77 1.532555 CCCTACGGCCCTACCCTAC 60.533 68.421 0.00 0.00 33.26 3.18
77 78 1.532555 CCTACGGCCCTACCCTACC 60.533 68.421 0.00 0.00 33.26 3.18
82 83 3.858225 GCCCTACCCTACCGCCAC 61.858 72.222 0.00 0.00 0.00 5.01
83 84 3.159347 CCCTACCCTACCGCCACC 61.159 72.222 0.00 0.00 0.00 4.61
84 85 3.159347 CCTACCCTACCGCCACCC 61.159 72.222 0.00 0.00 0.00 4.61
85 86 3.159347 CTACCCTACCGCCACCCC 61.159 72.222 0.00 0.00 0.00 4.95
86 87 4.802505 TACCCTACCGCCACCCCC 62.803 72.222 0.00 0.00 0.00 5.40
100 101 4.150454 CCCCTCGCCCCTCTCTCT 62.150 72.222 0.00 0.00 0.00 3.10
126 127 4.244802 CTCGCTCGCGACCTCTCC 62.245 72.222 3.71 0.00 44.01 3.71
135 136 4.131088 GACCTCTCCGGCGACCAC 62.131 72.222 9.30 0.00 35.61 4.16
155 156 4.222847 CGACCGAAGCCTAGGCCC 62.223 72.222 30.42 20.53 43.17 5.80
211 212 2.449450 GCCGCCCCTGGTATACCTT 61.449 63.158 22.41 0.00 36.82 3.50
221 245 4.595538 TATACCTTGCCGCCGCCG 62.596 66.667 0.00 0.00 0.00 6.46
286 323 3.134127 GTGCCCGCCTGTGGATTC 61.134 66.667 0.00 0.00 0.00 2.52
365 451 0.446616 GGTTTGCTCGGTTCCGATTC 59.553 55.000 14.34 9.88 37.83 2.52
377 463 2.855660 TCCGATTCGTCGCTATCAAA 57.144 45.000 5.20 0.00 0.00 2.69
378 464 2.456989 TCCGATTCGTCGCTATCAAAC 58.543 47.619 5.20 0.00 0.00 2.93
379 465 2.159352 TCCGATTCGTCGCTATCAAACA 60.159 45.455 5.20 0.00 0.00 2.83
380 466 2.034842 CCGATTCGTCGCTATCAAACAC 60.035 50.000 5.20 0.00 0.00 3.32
381 467 2.034842 CGATTCGTCGCTATCAAACACC 60.035 50.000 0.00 0.00 0.00 4.16
382 468 2.736144 TTCGTCGCTATCAAACACCT 57.264 45.000 0.00 0.00 0.00 4.00
383 469 1.990799 TCGTCGCTATCAAACACCTG 58.009 50.000 0.00 0.00 0.00 4.00
384 470 1.542472 TCGTCGCTATCAAACACCTGA 59.458 47.619 0.00 0.00 0.00 3.86
385 471 2.165641 TCGTCGCTATCAAACACCTGAT 59.834 45.455 0.00 0.00 39.41 2.90
386 472 3.379057 TCGTCGCTATCAAACACCTGATA 59.621 43.478 0.00 0.00 37.27 2.15
387 473 3.486108 CGTCGCTATCAAACACCTGATAC 59.514 47.826 0.00 0.00 37.27 2.24
388 474 4.683832 GTCGCTATCAAACACCTGATACT 58.316 43.478 0.00 0.00 37.27 2.12
389 475 4.740695 GTCGCTATCAAACACCTGATACTC 59.259 45.833 0.00 0.00 37.27 2.59
390 476 4.051922 CGCTATCAAACACCTGATACTCC 58.948 47.826 0.00 0.00 37.27 3.85
391 477 4.381411 GCTATCAAACACCTGATACTCCC 58.619 47.826 0.00 0.00 37.27 4.30
392 478 3.933861 ATCAAACACCTGATACTCCCC 57.066 47.619 0.00 0.00 34.20 4.81
393 479 1.913419 TCAAACACCTGATACTCCCCC 59.087 52.381 0.00 0.00 0.00 5.40
431 517 5.905331 ACACCTGATACTCCATGGATCTTAA 59.095 40.000 16.63 0.51 0.00 1.85
486 572 2.159841 CGCAAGTCCTACAAATGTGTCG 60.160 50.000 0.00 0.00 39.30 4.35
494 581 2.892373 ACAAATGTGTCGGTATTGCG 57.108 45.000 0.00 0.00 29.49 4.85
543 637 2.416547 CTGTATTGCTTGTGGAAGACGG 59.583 50.000 0.00 0.00 38.32 4.79
648 757 0.833949 CTTAGAAGGGGCTGGTCCTC 59.166 60.000 0.00 0.00 32.59 3.71
649 758 0.976073 TTAGAAGGGGCTGGTCCTCG 60.976 60.000 0.00 0.00 41.53 4.63
650 759 1.870941 TAGAAGGGGCTGGTCCTCGA 61.871 60.000 0.00 0.00 41.53 4.04
651 760 2.685380 AAGGGGCTGGTCCTCGAG 60.685 66.667 5.13 5.13 41.53 4.04
688 800 4.443034 GGCTAAGTCGATCTGGTTGGTATT 60.443 45.833 0.00 0.00 0.00 1.89
769 898 4.579869 ACCTGGCATAAGTTACACTTGAG 58.420 43.478 0.00 0.00 39.11 3.02
812 942 4.883083 TGTCTTCTGTGGTACTGTTCATC 58.117 43.478 0.00 0.00 0.00 2.92
826 966 6.727824 ACTGTTCATCTCTAATTTTGGTCG 57.272 37.500 0.00 0.00 0.00 4.79
830 970 5.084818 TCATCTCTAATTTTGGTCGCAGA 57.915 39.130 0.00 0.00 0.00 4.26
853 993 8.093307 CAGACATGGCTTATAGTCTCATATTGT 58.907 37.037 0.00 0.00 39.17 2.71
854 994 9.314133 AGACATGGCTTATAGTCTCATATTGTA 57.686 33.333 0.00 0.00 36.69 2.41
855 995 9.360093 GACATGGCTTATAGTCTCATATTGTAC 57.640 37.037 0.00 0.00 0.00 2.90
959 1111 4.579869 TCTCCTGTTTATCAGCTTCAACC 58.420 43.478 0.00 0.00 42.38 3.77
966 1118 6.567321 CTGTTTATCAGCTTCAACCTCAGTTG 60.567 42.308 0.00 0.00 44.42 3.16
981 1133 8.738645 AACCTCAGTTGATTTGGTCTATTATC 57.261 34.615 0.00 0.00 33.97 1.75
1201 1395 5.470098 CCAGTATCCATCTGGTAAATTTCCG 59.530 44.000 0.00 0.00 45.09 4.30
1424 1657 3.330267 GGTTCTCTGTCACAACCTGATC 58.670 50.000 0.00 0.00 37.24 2.92
1530 1763 5.239525 CACCCTTCTTAAGTTCACAAGGAAG 59.760 44.000 17.40 8.46 36.48 3.46
1609 1842 0.689745 TCTGGGGGATCCTTGGTACG 60.690 60.000 12.58 0.00 36.20 3.67
2093 2731 4.746535 AGGAAGGCTAAAGTAGAGCTTC 57.253 45.455 0.00 0.00 39.98 3.86
2298 2940 4.158394 GCTGAATGGAATGGCTAAAGTTGA 59.842 41.667 0.00 0.00 0.00 3.18
2333 2975 3.065925 GCAGTCTTCAGAAAAGTTGCTGT 59.934 43.478 0.00 0.00 33.90 4.40
2397 3039 6.696148 CAGAATATTTCATCAAAGAGCAAGGC 59.304 38.462 0.00 0.00 0.00 4.35
2460 3103 3.544684 TGAGCAAAGCTTCAGACAGAAA 58.455 40.909 0.00 0.00 39.88 2.52
2533 3257 1.415659 GCTGCTAGTCCATCACCTGAT 59.584 52.381 0.00 0.00 34.56 2.90
2845 3748 7.451877 TCCCAGCCATAGTAAATTTGTTTTGTA 59.548 33.333 0.00 0.00 0.00 2.41
2890 3799 6.402222 ACTCTATCTGTTTGTCACTCATTCC 58.598 40.000 0.00 0.00 0.00 3.01
3064 3973 2.587522 AGCTTTGGGAAAGGTCAGAAC 58.412 47.619 0.00 0.00 45.37 3.01
3297 6030 8.880991 TTGACTTTCTCTAGGTATCTGTTACT 57.119 34.615 0.00 0.00 0.00 2.24
3872 10563 0.036732 TCCCACATGCTGTTGGAGAC 59.963 55.000 1.70 0.00 37.28 3.36
4038 10831 9.565090 CAGAAAATCTGGATAGGAAATCACATA 57.435 33.333 0.00 0.00 40.71 2.29
4063 10859 7.118496 TGAAAGATGGTAAAAGAGGCAAAAA 57.882 32.000 0.00 0.00 0.00 1.94
4093 10889 3.434940 ACCTTCGCCTATTCCTTTTGT 57.565 42.857 0.00 0.00 0.00 2.83
4486 11287 1.448985 TGTGTAAGATCTTTGCCGGC 58.551 50.000 22.73 22.73 0.00 6.13
4588 11399 3.754965 AGAGGTGCAGCTATTTTTGACA 58.245 40.909 20.22 0.00 0.00 3.58
4951 11798 4.299155 CTGTATGTTATGTAGGTCCAGCG 58.701 47.826 0.00 0.00 0.00 5.18
4965 11812 4.341520 AGGTCCAGCGTATCCTAAACTTAG 59.658 45.833 0.00 0.00 0.00 2.18
5003 12173 8.437360 AGACGAATGTTGAATGCATATAAAGA 57.563 30.769 0.00 0.00 0.00 2.52
5066 12245 6.413018 TGAATCACTTTCATCGTCTGAATG 57.587 37.500 11.77 11.77 43.30 2.67
5110 12315 9.775854 TGCCATGAAAGATTAATTTGAGAAAAA 57.224 25.926 0.00 0.00 0.00 1.94
5142 12347 3.648339 TTTCTTTGAATCTGCCTGCAC 57.352 42.857 0.00 0.00 0.00 4.57
5156 12361 3.967326 TGCCTGCACTTATCCACTATAGT 59.033 43.478 0.00 0.00 0.00 2.12
5157 12362 4.408921 TGCCTGCACTTATCCACTATAGTT 59.591 41.667 1.56 0.00 0.00 2.24
5325 12540 5.538877 TGGAGTATCTTCTACCCTTTGGAT 58.461 41.667 0.00 0.00 33.73 3.41
5394 12963 0.608856 TGCTAACCATGCCACACCAG 60.609 55.000 0.00 0.00 0.00 4.00
5405 12974 2.910319 TGCCACACCAGAAGTTAGGTAT 59.090 45.455 0.00 0.00 36.07 2.73
5417 12988 3.951663 AGTTAGGTATGTTTGACCAGGC 58.048 45.455 0.00 0.00 39.65 4.85
5565 13318 6.017192 TGATATACCTGGTCCTATGTCTTCC 58.983 44.000 0.63 0.00 0.00 3.46
5566 13319 2.950990 ACCTGGTCCTATGTCTTCCT 57.049 50.000 0.00 0.00 0.00 3.36
5653 13406 0.662619 TGCTTGGTTGCAAGAACTCG 59.337 50.000 0.00 0.00 40.29 4.18
5694 13447 2.991250 TCATGCAGAACTTAAGGGAGC 58.009 47.619 7.53 6.03 0.00 4.70
5728 13483 7.832769 AGCAAAGTAAGTTTAACTTGAAACCA 58.167 30.769 19.32 0.00 39.11 3.67
5938 13711 6.981722 AGATTCCAACATTGTAAGGTTTGAC 58.018 36.000 7.76 0.00 29.39 3.18
6204 14041 6.645827 TGTTGTTTTATGATTGCATCAACAGG 59.354 34.615 0.00 0.00 43.50 4.00
6273 14110 1.668151 AGCTCAAGGACGCCGAAAC 60.668 57.895 0.00 0.00 0.00 2.78
6301 14138 2.826725 CTCGGAGGTTCAGAAGGTAAGT 59.173 50.000 0.00 0.00 0.00 2.24
6332 14177 1.580066 CCTAAACCCCAGGGATGCCA 61.580 60.000 7.25 0.00 38.96 4.92
6395 14245 1.068434 GAGAGCCCGGAAGAAGATGAG 59.932 57.143 0.73 0.00 0.00 2.90
6441 14291 1.998315 CTCATCACCGAAACTGCAGAG 59.002 52.381 23.35 8.43 0.00 3.35
6459 14309 0.689055 AGTGATCAAGCTCACCTGCA 59.311 50.000 0.00 0.00 45.41 4.41
6466 14316 0.035458 AAGCTCACCTGCACTACACC 59.965 55.000 0.00 0.00 34.99 4.16
6487 14345 4.890581 ACCATAGATAGATAGCTAAGGCGG 59.109 45.833 0.00 0.00 44.37 6.13
6593 14464 4.022849 AGGTTCATTTGCTTACAGTTCAGC 60.023 41.667 0.00 0.00 36.49 4.26
6623 14516 2.294512 TGTCTAGGAGCATAGCATCGTG 59.705 50.000 0.00 0.00 0.00 4.35
6672 14565 2.856557 GACTCGTTAACTTACCATCCGC 59.143 50.000 3.71 0.00 0.00 5.54
6685 14578 3.545124 ATCCGCGCAAGTTCCCACA 62.545 57.895 8.75 0.00 41.68 4.17
6692 14609 2.664916 CGCAAGTTCCCACAATTCTTG 58.335 47.619 0.00 0.00 38.60 3.02
6710 14627 1.720805 TGAATGAATCGTGTCGTGGG 58.279 50.000 0.00 0.00 0.00 4.61
6713 14630 0.606096 ATGAATCGTGTCGTGGGTCA 59.394 50.000 0.00 0.00 0.00 4.02
6741 14658 6.583912 ATGTAACGATCCAGTACAAAATCG 57.416 37.500 17.06 17.06 44.85 3.34
6742 14659 4.327898 TGTAACGATCCAGTACAAAATCGC 59.672 41.667 18.03 7.73 43.55 4.58
6743 14660 2.967362 ACGATCCAGTACAAAATCGCA 58.033 42.857 18.03 0.00 43.55 5.10
6744 14661 3.331150 ACGATCCAGTACAAAATCGCAA 58.669 40.909 18.03 0.00 43.55 4.85
6754 14673 7.219922 CAGTACAAAATCGCAAAAATGCTTAC 58.780 34.615 0.00 0.00 0.00 2.34
6790 14715 6.851609 TGCCATGTGAATGTGATAGTTAAAC 58.148 36.000 0.00 0.00 0.00 2.01
6806 14731 9.708092 GATAGTTAAACCAAGTGTACTCTTCTT 57.292 33.333 7.21 4.80 0.00 2.52
6807 14732 9.708092 ATAGTTAAACCAAGTGTACTCTTCTTC 57.292 33.333 7.21 0.00 0.00 2.87
6808 14733 7.793036 AGTTAAACCAAGTGTACTCTTCTTCT 58.207 34.615 7.21 0.00 0.00 2.85
6809 14734 8.265764 AGTTAAACCAAGTGTACTCTTCTTCTT 58.734 33.333 7.21 2.71 0.00 2.52
6810 14735 8.890718 GTTAAACCAAGTGTACTCTTCTTCTTT 58.109 33.333 7.21 5.73 0.00 2.52
6811 14736 7.939784 AAACCAAGTGTACTCTTCTTCTTTT 57.060 32.000 7.21 1.42 0.00 2.27
6812 14737 7.939784 AACCAAGTGTACTCTTCTTCTTTTT 57.060 32.000 7.21 0.00 0.00 1.94
6869 14794 5.163322 TGGTGGCATCTTTGATTCTTTTTGT 60.163 36.000 0.00 0.00 0.00 2.83
6871 14796 5.984926 GTGGCATCTTTGATTCTTTTTGTCA 59.015 36.000 0.00 0.00 0.00 3.58
6873 14798 7.172019 GTGGCATCTTTGATTCTTTTTGTCAAT 59.828 33.333 0.00 0.00 32.48 2.57
6874 14799 7.171848 TGGCATCTTTGATTCTTTTTGTCAATG 59.828 33.333 0.00 0.00 32.48 2.82
6875 14800 7.013529 GCATCTTTGATTCTTTTTGTCAATGC 58.986 34.615 0.00 0.00 32.04 3.56
6881 14809 6.355747 TGATTCTTTTTGTCAATGCCCTTTT 58.644 32.000 0.00 0.00 0.00 2.27
6943 14871 1.312815 GGCAATGTATGTCTGGCCTC 58.687 55.000 3.32 0.00 38.37 4.70
6944 14872 1.408683 GGCAATGTATGTCTGGCCTCA 60.409 52.381 3.32 0.74 38.37 3.86
6945 14873 1.945394 GCAATGTATGTCTGGCCTCAG 59.055 52.381 3.32 0.00 42.21 3.35
6946 14874 2.420547 GCAATGTATGTCTGGCCTCAGA 60.421 50.000 3.32 0.00 46.81 3.27
6982 14910 4.929819 AAAATTTAAGGTGTGGCGAAGT 57.070 36.364 0.00 0.00 0.00 3.01
6984 14912 2.922740 TTTAAGGTGTGGCGAAGTCT 57.077 45.000 0.00 0.00 0.00 3.24
6986 14914 4.339872 TTTAAGGTGTGGCGAAGTCTTA 57.660 40.909 0.00 0.00 0.00 2.10
6987 14915 2.922740 AAGGTGTGGCGAAGTCTTAA 57.077 45.000 0.00 0.00 0.00 1.85
6988 14916 2.457366 AGGTGTGGCGAAGTCTTAAG 57.543 50.000 0.00 0.00 0.00 1.85
6989 14917 1.002087 AGGTGTGGCGAAGTCTTAAGG 59.998 52.381 1.85 0.00 0.00 2.69
6990 14918 1.001633 GGTGTGGCGAAGTCTTAAGGA 59.998 52.381 1.85 0.00 0.00 3.36
6991 14919 2.549349 GGTGTGGCGAAGTCTTAAGGAA 60.549 50.000 1.85 0.00 0.00 3.36
6993 14921 3.186613 GTGTGGCGAAGTCTTAAGGAAAG 59.813 47.826 1.85 0.00 36.45 2.62
6994 14922 3.070446 TGTGGCGAAGTCTTAAGGAAAGA 59.930 43.478 1.85 0.00 42.07 2.52
6995 14923 4.062991 GTGGCGAAGTCTTAAGGAAAGAA 58.937 43.478 1.85 0.00 45.78 2.52
7007 14935 9.133627 GTCTTAAGGAAAGAATTCTTTTGATGC 57.866 33.333 29.24 18.01 45.78 3.91
7008 14936 8.859090 TCTTAAGGAAAGAATTCTTTTGATGCA 58.141 29.630 29.24 14.24 45.37 3.96
7009 14937 9.480053 CTTAAGGAAAGAATTCTTTTGATGCAA 57.520 29.630 29.24 18.28 45.37 4.08
7011 14939 8.913487 AAGGAAAGAATTCTTTTGATGCAAAT 57.087 26.923 29.24 7.98 45.37 2.32
7012 14940 8.543862 AGGAAAGAATTCTTTTGATGCAAATC 57.456 30.769 29.24 15.28 45.37 2.17
7013 14941 7.330208 AGGAAAGAATTCTTTTGATGCAAATCG 59.670 33.333 29.24 0.00 45.37 3.34
7016 14944 8.592105 AAGAATTCTTTTGATGCAAATCGAAA 57.408 26.923 15.11 0.00 33.19 3.46
7017 14945 8.236084 AGAATTCTTTTGATGCAAATCGAAAG 57.764 30.769 18.34 18.34 46.24 2.62
7036 14964 8.462143 TCGAAAGAGTCAATACAGATTACAAC 57.538 34.615 0.00 0.00 34.84 3.32
7037 14965 7.544566 TCGAAAGAGTCAATACAGATTACAACC 59.455 37.037 0.00 0.00 34.84 3.77
7038 14966 7.462856 CGAAAGAGTCAATACAGATTACAACCG 60.463 40.741 0.00 0.00 0.00 4.44
7039 14967 6.525578 AGAGTCAATACAGATTACAACCGA 57.474 37.500 0.00 0.00 0.00 4.69
7045 14973 8.287503 GTCAATACAGATTACAACCGAAAAACT 58.712 33.333 0.00 0.00 0.00 2.66
7046 14974 9.491675 TCAATACAGATTACAACCGAAAAACTA 57.508 29.630 0.00 0.00 0.00 2.24
7076 15004 9.723601 ACAATAAAAATGTAGGCATGTTTCAAT 57.276 25.926 0.00 0.00 40.60 2.57
7082 15010 7.716799 AATGTAGGCATGTTTCAATAGGAAA 57.283 32.000 0.00 0.00 38.02 3.13
7083 15011 7.716799 ATGTAGGCATGTTTCAATAGGAAAA 57.283 32.000 0.00 0.00 46.53 2.29
7084 15012 6.919721 TGTAGGCATGTTTCAATAGGAAAAC 58.080 36.000 0.00 0.00 46.53 2.43
7085 15013 6.491745 TGTAGGCATGTTTCAATAGGAAAACA 59.508 34.615 3.45 3.45 46.53 2.83
7087 15015 6.223120 AGGCATGTTTCAATAGGAAAACAAC 58.777 36.000 4.94 1.61 46.53 3.32
7089 15017 6.705825 GGCATGTTTCAATAGGAAAACAACTT 59.294 34.615 4.94 0.00 46.53 2.66
7090 15018 7.870445 GGCATGTTTCAATAGGAAAACAACTTA 59.130 33.333 4.94 0.00 46.53 2.24
7091 15019 9.255304 GCATGTTTCAATAGGAAAACAACTTAA 57.745 29.630 4.94 0.00 46.53 1.85
7119 15047 9.950680 ACATAACGATAATAAAGCTTTCAATGG 57.049 29.630 16.57 11.10 0.00 3.16
7122 15050 4.911610 CGATAATAAAGCTTTCAATGGCGG 59.088 41.667 16.57 0.00 0.00 6.13
7123 15051 2.584492 ATAAAGCTTTCAATGGCGGC 57.416 45.000 16.57 0.00 0.00 6.53
7124 15052 1.544724 TAAAGCTTTCAATGGCGGCT 58.455 45.000 16.57 0.00 34.52 5.52
7125 15053 0.244721 AAAGCTTTCAATGGCGGCTC 59.755 50.000 11.43 0.00 32.46 4.70
7126 15054 0.895100 AAGCTTTCAATGGCGGCTCA 60.895 50.000 11.43 0.00 32.46 4.26
7127 15055 0.895100 AGCTTTCAATGGCGGCTCAA 60.895 50.000 11.43 0.00 0.00 3.02
7128 15056 0.174162 GCTTTCAATGGCGGCTCAAT 59.826 50.000 11.43 0.00 0.00 2.57
7129 15057 1.917273 CTTTCAATGGCGGCTCAATG 58.083 50.000 11.43 4.06 0.00 2.82
7130 15058 1.473677 CTTTCAATGGCGGCTCAATGA 59.526 47.619 11.43 6.51 0.00 2.57
7131 15059 0.810648 TTCAATGGCGGCTCAATGAC 59.189 50.000 11.43 0.00 0.00 3.06
7133 15061 1.754234 AATGGCGGCTCAATGACCC 60.754 57.895 11.43 0.00 0.00 4.46
7134 15062 2.497792 AATGGCGGCTCAATGACCCA 62.498 55.000 11.43 0.00 0.00 4.51
7135 15063 2.825836 GGCGGCTCAATGACCCAG 60.826 66.667 0.00 0.00 0.00 4.45
7136 15064 2.825836 GCGGCTCAATGACCCAGG 60.826 66.667 0.00 0.00 0.00 4.45
7137 15065 2.825836 CGGCTCAATGACCCAGGC 60.826 66.667 0.00 0.00 0.00 4.85
7138 15066 2.356278 GGCTCAATGACCCAGGCA 59.644 61.111 0.00 0.00 33.00 4.75
7139 15067 1.304381 GGCTCAATGACCCAGGCAA 60.304 57.895 0.00 0.00 33.00 4.52
7140 15068 0.685458 GGCTCAATGACCCAGGCAAT 60.685 55.000 0.00 0.00 33.00 3.56
7141 15069 0.458669 GCTCAATGACCCAGGCAATG 59.541 55.000 0.00 0.00 0.00 2.82
7158 15086 3.006677 GGCAATGCCCTACCCTCA 58.993 61.111 14.47 0.00 44.06 3.86
7159 15087 1.538666 GGCAATGCCCTACCCTCAT 59.461 57.895 14.47 0.00 44.06 2.90
7160 15088 0.106015 GGCAATGCCCTACCCTCATT 60.106 55.000 14.47 0.00 44.06 2.57
7161 15089 1.689258 GGCAATGCCCTACCCTCATTT 60.689 52.381 14.47 0.00 44.06 2.32
7162 15090 1.683385 GCAATGCCCTACCCTCATTTC 59.317 52.381 0.00 0.00 0.00 2.17
7164 15092 2.954318 CAATGCCCTACCCTCATTTCTG 59.046 50.000 0.00 0.00 0.00 3.02
7165 15093 1.965414 TGCCCTACCCTCATTTCTGA 58.035 50.000 0.00 0.00 0.00 3.27
7167 15095 2.647299 TGCCCTACCCTCATTTCTGAAA 59.353 45.455 5.15 5.15 0.00 2.69
7169 15097 4.264352 TGCCCTACCCTCATTTCTGAAAAT 60.264 41.667 6.95 0.00 35.43 1.82
7170 15098 4.339530 GCCCTACCCTCATTTCTGAAAATC 59.660 45.833 6.95 0.00 32.69 2.17
7171 15099 5.760131 CCCTACCCTCATTTCTGAAAATCT 58.240 41.667 6.95 0.00 32.69 2.40
7172 15100 6.190587 CCCTACCCTCATTTCTGAAAATCTT 58.809 40.000 6.95 0.00 32.69 2.40
7173 15101 6.665248 CCCTACCCTCATTTCTGAAAATCTTT 59.335 38.462 6.95 0.00 32.69 2.52
7174 15102 7.148000 CCCTACCCTCATTTCTGAAAATCTTTC 60.148 40.741 6.95 0.00 32.69 2.62
7175 15103 7.613411 CCTACCCTCATTTCTGAAAATCTTTCT 59.387 37.037 6.95 0.00 32.69 2.52
7176 15104 7.846101 ACCCTCATTTCTGAAAATCTTTCTT 57.154 32.000 6.95 0.00 32.69 2.52
7177 15105 8.940397 ACCCTCATTTCTGAAAATCTTTCTTA 57.060 30.769 6.95 0.00 32.69 2.10
7178 15106 9.367160 ACCCTCATTTCTGAAAATCTTTCTTAA 57.633 29.630 6.95 0.00 32.69 1.85
7204 15132 9.981114 ATTTTACCAAGACCAATACTTTTGAAG 57.019 29.630 0.00 0.00 0.00 3.02
7206 15134 8.934023 TTACCAAGACCAATACTTTTGAAGAT 57.066 30.769 0.00 0.00 0.00 2.40
7208 15136 7.234355 ACCAAGACCAATACTTTTGAAGATCT 58.766 34.615 0.00 0.00 0.00 2.75
7209 15137 7.391833 ACCAAGACCAATACTTTTGAAGATCTC 59.608 37.037 0.00 0.00 0.00 2.75
7210 15138 7.609532 CCAAGACCAATACTTTTGAAGATCTCT 59.390 37.037 0.00 0.00 0.00 3.10
7211 15139 8.663911 CAAGACCAATACTTTTGAAGATCTCTC 58.336 37.037 0.00 0.00 0.00 3.20
7212 15140 7.038659 AGACCAATACTTTTGAAGATCTCTCG 58.961 38.462 0.00 0.00 0.00 4.04
7213 15141 5.582665 ACCAATACTTTTGAAGATCTCTCGC 59.417 40.000 0.00 0.00 0.00 5.03
7215 15143 6.019156 CCAATACTTTTGAAGATCTCTCGCTC 60.019 42.308 0.00 0.00 0.00 5.03
7216 15144 4.527509 ACTTTTGAAGATCTCTCGCTCA 57.472 40.909 0.00 0.00 0.00 4.26
7218 15146 5.486526 ACTTTTGAAGATCTCTCGCTCAAT 58.513 37.500 7.44 0.00 32.00 2.57
7220 15148 7.271511 ACTTTTGAAGATCTCTCGCTCAATAT 58.728 34.615 7.44 0.00 32.00 1.28
7221 15149 8.417106 ACTTTTGAAGATCTCTCGCTCAATATA 58.583 33.333 7.44 0.00 32.00 0.86
7222 15150 9.254133 CTTTTGAAGATCTCTCGCTCAATATAA 57.746 33.333 7.44 0.50 32.00 0.98
7223 15151 8.581057 TTTGAAGATCTCTCGCTCAATATAAC 57.419 34.615 7.44 0.00 32.00 1.89
7224 15152 7.277174 TGAAGATCTCTCGCTCAATATAACA 57.723 36.000 0.00 0.00 0.00 2.41
7225 15153 7.716612 TGAAGATCTCTCGCTCAATATAACAA 58.283 34.615 0.00 0.00 0.00 2.83
7226 15154 8.197439 TGAAGATCTCTCGCTCAATATAACAAA 58.803 33.333 0.00 0.00 0.00 2.83
7228 15156 6.926272 AGATCTCTCGCTCAATATAACAAACC 59.074 38.462 0.00 0.00 0.00 3.27
7229 15157 6.222038 TCTCTCGCTCAATATAACAAACCT 57.778 37.500 0.00 0.00 0.00 3.50
7230 15158 6.273825 TCTCTCGCTCAATATAACAAACCTC 58.726 40.000 0.00 0.00 0.00 3.85
7236 15164 5.125417 GCTCAATATAACAAACCTCAAGCCA 59.875 40.000 0.00 0.00 0.00 4.75
7237 15165 6.183360 GCTCAATATAACAAACCTCAAGCCAT 60.183 38.462 0.00 0.00 0.00 4.40
7238 15166 7.631377 GCTCAATATAACAAACCTCAAGCCATT 60.631 37.037 0.00 0.00 0.00 3.16
7239 15167 8.815565 TCAATATAACAAACCTCAAGCCATTA 57.184 30.769 0.00 0.00 0.00 1.90
7240 15168 9.249053 TCAATATAACAAACCTCAAGCCATTAA 57.751 29.630 0.00 0.00 0.00 1.40
7241 15169 9.520204 CAATATAACAAACCTCAAGCCATTAAG 57.480 33.333 0.00 0.00 0.00 1.85
7242 15170 3.942130 ACAAACCTCAAGCCATTAAGC 57.058 42.857 0.00 0.00 0.00 3.09
7243 15171 2.562738 ACAAACCTCAAGCCATTAAGCC 59.437 45.455 0.00 0.00 0.00 4.35
7245 15173 2.603075 ACCTCAAGCCATTAAGCCAA 57.397 45.000 0.00 0.00 0.00 4.52
7246 15174 2.171003 ACCTCAAGCCATTAAGCCAAC 58.829 47.619 0.00 0.00 0.00 3.77
7247 15175 1.478105 CCTCAAGCCATTAAGCCAACC 59.522 52.381 0.00 0.00 0.00 3.77
7248 15176 2.170166 CTCAAGCCATTAAGCCAACCA 58.830 47.619 0.00 0.00 0.00 3.67
7249 15177 2.762327 CTCAAGCCATTAAGCCAACCAT 59.238 45.455 0.00 0.00 0.00 3.55
7250 15178 2.760092 TCAAGCCATTAAGCCAACCATC 59.240 45.455 0.00 0.00 0.00 3.51
7251 15179 1.392589 AGCCATTAAGCCAACCATCG 58.607 50.000 0.00 0.00 0.00 3.84
7252 15180 0.385390 GCCATTAAGCCAACCATCGG 59.615 55.000 0.00 0.00 0.00 4.18
7253 15181 1.762708 CCATTAAGCCAACCATCGGT 58.237 50.000 0.00 0.00 37.65 4.69
7254 15182 1.676006 CCATTAAGCCAACCATCGGTC 59.324 52.381 0.00 0.00 33.12 4.79
7255 15183 2.364632 CATTAAGCCAACCATCGGTCA 58.635 47.619 0.00 0.00 33.12 4.02
7257 15185 2.325583 TAAGCCAACCATCGGTCATC 57.674 50.000 0.00 0.00 33.12 2.92
7258 15186 0.620556 AAGCCAACCATCGGTCATCT 59.379 50.000 0.00 0.00 33.12 2.90
7259 15187 0.620556 AGCCAACCATCGGTCATCTT 59.379 50.000 0.00 0.00 33.12 2.40
7260 15188 0.734889 GCCAACCATCGGTCATCTTG 59.265 55.000 0.00 0.00 33.12 3.02
7261 15189 0.734889 CCAACCATCGGTCATCTTGC 59.265 55.000 0.00 0.00 33.12 4.01
7262 15190 1.679944 CCAACCATCGGTCATCTTGCT 60.680 52.381 0.00 0.00 33.12 3.91
7263 15191 1.399440 CAACCATCGGTCATCTTGCTG 59.601 52.381 0.00 0.00 33.12 4.41
7264 15192 0.745845 ACCATCGGTCATCTTGCTGC 60.746 55.000 0.00 0.00 0.00 5.25
7265 15193 1.640069 CATCGGTCATCTTGCTGCG 59.360 57.895 0.00 0.00 0.00 5.18
7267 15195 2.857575 ATCGGTCATCTTGCTGCGCA 62.858 55.000 10.98 10.98 36.47 6.09
7268 15196 2.679934 CGGTCATCTTGCTGCGCAA 61.680 57.895 13.05 13.76 46.80 4.85
7270 15198 1.580845 GGTCATCTTGCTGCGCAACT 61.581 55.000 13.05 0.00 43.99 3.16
7271 15199 0.179205 GTCATCTTGCTGCGCAACTC 60.179 55.000 13.05 4.11 43.99 3.01
7273 15201 0.179197 CATCTTGCTGCGCAACTCAG 60.179 55.000 13.05 7.89 43.99 3.35
7274 15202 0.604780 ATCTTGCTGCGCAACTCAGT 60.605 50.000 13.05 0.00 43.99 3.41
7275 15203 1.206072 CTTGCTGCGCAACTCAGTC 59.794 57.895 13.05 0.00 43.99 3.51
7276 15204 1.226686 CTTGCTGCGCAACTCAGTCT 61.227 55.000 13.05 0.00 43.99 3.24
7278 15206 1.206072 GCTGCGCAACTCAGTCTTG 59.794 57.895 13.05 0.00 34.21 3.02
7279 15207 1.224069 GCTGCGCAACTCAGTCTTGA 61.224 55.000 13.05 0.00 34.21 3.02
7280 15208 1.436600 CTGCGCAACTCAGTCTTGAT 58.563 50.000 13.05 0.00 31.68 2.57
7281 15209 1.128136 CTGCGCAACTCAGTCTTGATG 59.872 52.381 13.05 0.00 31.68 3.07
7282 15210 1.270252 TGCGCAACTCAGTCTTGATGA 60.270 47.619 8.16 0.00 31.68 2.92
7283 15211 2.005451 GCGCAACTCAGTCTTGATGAT 58.995 47.619 0.30 0.00 31.68 2.45
7284 15212 2.417933 GCGCAACTCAGTCTTGATGATT 59.582 45.455 0.30 0.00 31.68 2.57
7286 15214 4.614535 GCGCAACTCAGTCTTGATGATTTT 60.615 41.667 0.30 0.00 31.68 1.82
7287 15215 5.084722 CGCAACTCAGTCTTGATGATTTTC 58.915 41.667 0.00 0.00 31.68 2.29
7288 15216 5.334337 CGCAACTCAGTCTTGATGATTTTCA 60.334 40.000 0.00 0.00 31.68 2.69
7289 15217 6.618811 GCAACTCAGTCTTGATGATTTTCAT 58.381 36.000 0.00 0.00 40.34 2.57
7290 15218 7.088905 GCAACTCAGTCTTGATGATTTTCATT 58.911 34.615 0.00 0.00 37.20 2.57
7291 15219 7.061905 GCAACTCAGTCTTGATGATTTTCATTG 59.938 37.037 0.00 0.00 37.20 2.82
7292 15220 7.991084 ACTCAGTCTTGATGATTTTCATTGA 57.009 32.000 0.00 0.00 37.20 2.57
7293 15221 8.577048 ACTCAGTCTTGATGATTTTCATTGAT 57.423 30.769 0.00 0.00 37.20 2.57
7294 15222 8.459635 ACTCAGTCTTGATGATTTTCATTGATG 58.540 33.333 0.00 0.00 37.20 3.07
7295 15223 8.570068 TCAGTCTTGATGATTTTCATTGATGA 57.430 30.769 0.00 0.00 37.20 2.92
7297 15225 8.674607 CAGTCTTGATGATTTTCATTGATGAGA 58.325 33.333 0.00 0.00 37.20 3.27
7298 15226 9.239551 AGTCTTGATGATTTTCATTGATGAGAA 57.760 29.630 0.21 0.21 37.20 2.87
7300 15228 8.683615 TCTTGATGATTTTCATTGATGAGAAGG 58.316 33.333 3.77 0.00 37.20 3.46
7302 15230 5.587388 TGATTTTCATTGATGAGAAGGCC 57.413 39.130 0.00 0.00 38.19 5.19
7303 15231 4.403432 TGATTTTCATTGATGAGAAGGCCC 59.597 41.667 0.00 0.00 38.19 5.80
7304 15232 3.744940 TTTCATTGATGAGAAGGCCCT 57.255 42.857 0.00 0.00 38.19 5.19
7305 15233 3.744940 TTCATTGATGAGAAGGCCCTT 57.255 42.857 0.00 0.00 38.19 3.95
7310 15238 3.744940 TGATGAGAAGGCCCTTTCAAT 57.255 42.857 0.00 0.00 0.00 2.57
7311 15239 4.051661 TGATGAGAAGGCCCTTTCAATT 57.948 40.909 0.00 0.00 0.00 2.32
7313 15241 3.243359 TGAGAAGGCCCTTTCAATTGT 57.757 42.857 5.13 0.00 0.00 2.71
7315 15243 3.321682 TGAGAAGGCCCTTTCAATTGTTG 59.678 43.478 5.13 0.00 0.00 3.33
7317 15245 0.686789 AGGCCCTTTCAATTGTTGCC 59.313 50.000 5.13 10.98 37.68 4.52
7318 15246 0.670239 GGCCCTTTCAATTGTTGCCG 60.670 55.000 5.13 0.00 0.00 5.69
7319 15247 0.033366 GCCCTTTCAATTGTTGCCGT 59.967 50.000 5.13 0.00 0.00 5.68
7320 15248 1.934849 GCCCTTTCAATTGTTGCCGTC 60.935 52.381 5.13 0.00 0.00 4.79
7323 15251 0.665835 TTTCAATTGTTGCCGTCGCT 59.334 45.000 5.13 0.00 35.36 4.93
7324 15252 1.514003 TTCAATTGTTGCCGTCGCTA 58.486 45.000 5.13 0.00 35.36 4.26
7325 15253 0.793861 TCAATTGTTGCCGTCGCTAC 59.206 50.000 5.13 0.00 40.62 3.58
7326 15254 0.179200 CAATTGTTGCCGTCGCTACC 60.179 55.000 0.00 0.00 39.64 3.18
7333 15261 3.501396 CCGTCGCTACCGGTAGAA 58.499 61.111 39.65 25.49 40.59 2.10
7334 15262 1.802636 CCGTCGCTACCGGTAGAAA 59.197 57.895 39.65 25.15 40.59 2.52
7336 15264 0.864797 CGTCGCTACCGGTAGAAAGC 60.865 60.000 39.65 27.95 35.21 3.51
7338 15266 1.108776 TCGCTACCGGTAGAAAGCAT 58.891 50.000 39.65 2.91 35.21 3.79
7339 15267 2.033801 GTCGCTACCGGTAGAAAGCATA 59.966 50.000 39.65 18.26 35.21 3.14
7340 15268 2.292569 TCGCTACCGGTAGAAAGCATAG 59.707 50.000 39.65 17.49 35.21 2.23
7342 15270 2.866855 GCTACCGGTAGAAAGCATAGCC 60.867 54.545 39.65 17.44 34.03 3.93
7343 15271 1.200519 ACCGGTAGAAAGCATAGCCA 58.799 50.000 4.49 0.00 0.00 4.75
7344 15272 1.557832 ACCGGTAGAAAGCATAGCCAA 59.442 47.619 4.49 0.00 0.00 4.52
7346 15274 2.420129 CCGGTAGAAAGCATAGCCAACT 60.420 50.000 0.00 0.00 0.00 3.16
7347 15275 2.866762 CGGTAGAAAGCATAGCCAACTC 59.133 50.000 0.00 0.00 0.00 3.01
7348 15276 3.678806 CGGTAGAAAGCATAGCCAACTCA 60.679 47.826 0.00 0.00 0.00 3.41
7350 15278 4.884164 GGTAGAAAGCATAGCCAACTCAAT 59.116 41.667 0.00 0.00 0.00 2.57
7351 15279 4.978083 AGAAAGCATAGCCAACTCAATG 57.022 40.909 0.00 0.00 0.00 2.82
7353 15281 4.639310 AGAAAGCATAGCCAACTCAATGAG 59.361 41.667 8.98 8.98 35.52 2.90
7354 15282 3.920231 AGCATAGCCAACTCAATGAGA 57.080 42.857 18.20 0.00 33.32 3.27
7355 15283 4.226427 AGCATAGCCAACTCAATGAGAA 57.774 40.909 18.20 0.00 33.32 2.87
7356 15284 4.592942 AGCATAGCCAACTCAATGAGAAA 58.407 39.130 18.20 0.00 33.32 2.52
7358 15286 5.655532 AGCATAGCCAACTCAATGAGAAATT 59.344 36.000 18.20 0.00 33.32 1.82
7359 15287 6.830324 AGCATAGCCAACTCAATGAGAAATTA 59.170 34.615 18.20 3.41 33.32 1.40
7360 15288 6.914757 GCATAGCCAACTCAATGAGAAATTAC 59.085 38.462 18.20 1.35 33.32 1.89
7361 15289 7.201767 GCATAGCCAACTCAATGAGAAATTACT 60.202 37.037 18.20 8.54 33.32 2.24
7362 15290 9.330063 CATAGCCAACTCAATGAGAAATTACTA 57.670 33.333 18.20 10.29 33.32 1.82
7363 15291 7.617041 AGCCAACTCAATGAGAAATTACTAC 57.383 36.000 18.20 0.00 33.32 2.73
7365 15293 7.665559 AGCCAACTCAATGAGAAATTACTACAA 59.334 33.333 18.20 0.00 33.32 2.41
7366 15294 8.296713 GCCAACTCAATGAGAAATTACTACAAA 58.703 33.333 18.20 0.00 33.32 2.83
7388 15316 9.764363 ACAAAATTTCAGAAATTACCTCTTTCC 57.236 29.630 19.44 0.00 40.05 3.13
7389 15317 9.208022 CAAAATTTCAGAAATTACCTCTTTCCC 57.792 33.333 19.44 0.00 40.05 3.97
7390 15318 8.727100 AAATTTCAGAAATTACCTCTTTCCCT 57.273 30.769 19.44 0.00 40.05 4.20
7391 15319 8.727100 AATTTCAGAAATTACCTCTTTCCCTT 57.273 30.769 18.00 0.00 39.21 3.95
7393 15321 8.547481 TTTCAGAAATTACCTCTTTCCCTTTT 57.453 30.769 0.00 0.00 33.93 2.27
7394 15322 7.761038 TCAGAAATTACCTCTTTCCCTTTTC 57.239 36.000 0.00 0.00 33.93 2.29
7395 15323 7.526918 TCAGAAATTACCTCTTTCCCTTTTCT 58.473 34.615 0.00 0.00 33.93 2.52
7397 15325 8.642432 CAGAAATTACCTCTTTCCCTTTTCTTT 58.358 33.333 0.00 0.00 33.93 2.52
7399 15327 6.918067 ATTACCTCTTTCCCTTTTCTTTGG 57.082 37.500 0.00 0.00 0.00 3.28
7400 15328 4.536295 ACCTCTTTCCCTTTTCTTTGGA 57.464 40.909 0.00 0.00 0.00 3.53
7401 15329 5.079998 ACCTCTTTCCCTTTTCTTTGGAT 57.920 39.130 0.00 0.00 0.00 3.41
7402 15330 5.467738 ACCTCTTTCCCTTTTCTTTGGATT 58.532 37.500 0.00 0.00 0.00 3.01
7403 15331 5.905331 ACCTCTTTCCCTTTTCTTTGGATTT 59.095 36.000 0.00 0.00 0.00 2.17
7404 15332 6.183361 ACCTCTTTCCCTTTTCTTTGGATTTG 60.183 38.462 0.00 0.00 0.00 2.32
7405 15333 5.610398 TCTTTCCCTTTTCTTTGGATTTGC 58.390 37.500 0.00 0.00 0.00 3.68
7407 15335 6.553100 TCTTTCCCTTTTCTTTGGATTTGCTA 59.447 34.615 0.00 0.00 0.00 3.49
7408 15336 6.739331 TTCCCTTTTCTTTGGATTTGCTAA 57.261 33.333 0.00 0.00 0.00 3.09
7409 15337 6.933514 TCCCTTTTCTTTGGATTTGCTAAT 57.066 33.333 0.00 0.00 0.00 1.73
7410 15338 6.935167 TCCCTTTTCTTTGGATTTGCTAATC 58.065 36.000 11.84 11.84 39.57 1.75
7421 15349 5.876651 GATTTGCTAATCCATTCCCCTTT 57.123 39.130 9.43 0.00 35.19 3.11
7422 15350 5.847304 GATTTGCTAATCCATTCCCCTTTC 58.153 41.667 9.43 0.00 35.19 2.62
7423 15351 4.608170 TTGCTAATCCATTCCCCTTTCT 57.392 40.909 0.00 0.00 0.00 2.52
7424 15352 5.725551 TTGCTAATCCATTCCCCTTTCTA 57.274 39.130 0.00 0.00 0.00 2.10
7425 15353 5.930209 TGCTAATCCATTCCCCTTTCTAT 57.070 39.130 0.00 0.00 0.00 1.98
7426 15354 5.880901 TGCTAATCCATTCCCCTTTCTATC 58.119 41.667 0.00 0.00 0.00 2.08
7427 15355 5.222130 TGCTAATCCATTCCCCTTTCTATCC 60.222 44.000 0.00 0.00 0.00 2.59
7428 15356 5.222130 GCTAATCCATTCCCCTTTCTATCCA 60.222 44.000 0.00 0.00 0.00 3.41
7429 15357 5.955850 AATCCATTCCCCTTTCTATCCAT 57.044 39.130 0.00 0.00 0.00 3.41
7430 15358 5.527026 ATCCATTCCCCTTTCTATCCATC 57.473 43.478 0.00 0.00 0.00 3.51
7432 15360 4.984268 TCCATTCCCCTTTCTATCCATCTT 59.016 41.667 0.00 0.00 0.00 2.40
7436 15364 7.393216 CATTCCCCTTTCTATCCATCTTCTAG 58.607 42.308 0.00 0.00 0.00 2.43
7437 15365 6.044411 TCCCCTTTCTATCCATCTTCTAGT 57.956 41.667 0.00 0.00 0.00 2.57
7438 15366 7.175635 TCCCCTTTCTATCCATCTTCTAGTA 57.824 40.000 0.00 0.00 0.00 1.82
7439 15367 7.601942 TCCCCTTTCTATCCATCTTCTAGTAA 58.398 38.462 0.00 0.00 0.00 2.24
7440 15368 8.242325 TCCCCTTTCTATCCATCTTCTAGTAAT 58.758 37.037 0.00 0.00 0.00 1.89
7441 15369 8.536175 CCCCTTTCTATCCATCTTCTAGTAATC 58.464 40.741 0.00 0.00 0.00 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.287977 TCAGAAGGGTGTCGAAGAGA 57.712 50.000 0.00 0.00 36.95 3.10
3 4 3.830744 TTTTCAGAAGGGTGTCGAAGA 57.169 42.857 0.00 0.00 0.00 2.87
4 5 4.377431 CGAATTTTCAGAAGGGTGTCGAAG 60.377 45.833 0.00 0.00 0.00 3.79
5 6 3.496884 CGAATTTTCAGAAGGGTGTCGAA 59.503 43.478 0.00 0.00 0.00 3.71
6 7 3.064207 CGAATTTTCAGAAGGGTGTCGA 58.936 45.455 0.00 0.00 0.00 4.20
8 9 2.095212 GGCGAATTTTCAGAAGGGTGTC 60.095 50.000 0.00 0.00 0.00 3.67
9 10 1.886542 GGCGAATTTTCAGAAGGGTGT 59.113 47.619 0.00 0.00 0.00 4.16
10 11 1.202348 GGGCGAATTTTCAGAAGGGTG 59.798 52.381 0.00 0.00 0.00 4.61
11 12 1.545841 GGGCGAATTTTCAGAAGGGT 58.454 50.000 0.00 0.00 0.00 4.34
12 13 0.817654 GGGGCGAATTTTCAGAAGGG 59.182 55.000 0.00 0.00 0.00 3.95
13 14 0.451783 CGGGGCGAATTTTCAGAAGG 59.548 55.000 0.00 0.00 0.00 3.46
14 15 0.179163 GCGGGGCGAATTTTCAGAAG 60.179 55.000 0.00 0.00 0.00 2.85
15 16 1.880186 GCGGGGCGAATTTTCAGAA 59.120 52.632 0.00 0.00 0.00 3.02
16 17 3.585856 GCGGGGCGAATTTTCAGA 58.414 55.556 0.00 0.00 0.00 3.27
36 37 4.109675 ATTTCGTGAGGGGGCGGG 62.110 66.667 0.00 0.00 0.00 6.13
37 38 2.513897 GATTTCGTGAGGGGGCGG 60.514 66.667 0.00 0.00 0.00 6.13
38 39 2.513897 GGATTTCGTGAGGGGGCG 60.514 66.667 0.00 0.00 0.00 6.13
39 40 2.124278 GGGATTTCGTGAGGGGGC 60.124 66.667 0.00 0.00 0.00 5.80
40 41 2.595655 GGGGATTTCGTGAGGGGG 59.404 66.667 0.00 0.00 0.00 5.40
41 42 2.595655 GGGGGATTTCGTGAGGGG 59.404 66.667 0.00 0.00 0.00 4.79
60 61 1.900498 CGGTAGGGTAGGGCCGTAG 60.900 68.421 5.14 0.00 38.18 3.51
61 62 2.195683 CGGTAGGGTAGGGCCGTA 59.804 66.667 0.00 0.00 39.41 4.02
65 66 3.858225 GTGGCGGTAGGGTAGGGC 61.858 72.222 0.00 0.00 0.00 5.19
66 67 3.159347 GGTGGCGGTAGGGTAGGG 61.159 72.222 0.00 0.00 0.00 3.53
67 68 3.159347 GGGTGGCGGTAGGGTAGG 61.159 72.222 0.00 0.00 0.00 3.18
68 69 3.159347 GGGGTGGCGGTAGGGTAG 61.159 72.222 0.00 0.00 0.00 3.18
69 70 4.802505 GGGGGTGGCGGTAGGGTA 62.803 72.222 0.00 0.00 0.00 3.69
83 84 4.150454 AGAGAGAGGGGCGAGGGG 62.150 72.222 0.00 0.00 0.00 4.79
84 85 2.520741 GAGAGAGAGGGGCGAGGG 60.521 72.222 0.00 0.00 0.00 4.30
85 86 1.528309 GAGAGAGAGAGGGGCGAGG 60.528 68.421 0.00 0.00 0.00 4.63
86 87 0.535102 GAGAGAGAGAGAGGGGCGAG 60.535 65.000 0.00 0.00 0.00 5.03
87 88 0.986019 AGAGAGAGAGAGAGGGGCGA 60.986 60.000 0.00 0.00 0.00 5.54
88 89 0.535102 GAGAGAGAGAGAGAGGGGCG 60.535 65.000 0.00 0.00 0.00 6.13
89 90 0.846693 AGAGAGAGAGAGAGAGGGGC 59.153 60.000 0.00 0.00 0.00 5.80
90 91 2.370189 GAGAGAGAGAGAGAGAGAGGGG 59.630 59.091 0.00 0.00 0.00 4.79
91 92 2.036475 CGAGAGAGAGAGAGAGAGAGGG 59.964 59.091 0.00 0.00 0.00 4.30
92 93 2.546795 GCGAGAGAGAGAGAGAGAGAGG 60.547 59.091 0.00 0.00 0.00 3.69
93 94 2.363680 AGCGAGAGAGAGAGAGAGAGAG 59.636 54.545 0.00 0.00 0.00 3.20
94 95 2.362397 GAGCGAGAGAGAGAGAGAGAGA 59.638 54.545 0.00 0.00 0.00 3.10
95 96 2.748605 GAGCGAGAGAGAGAGAGAGAG 58.251 57.143 0.00 0.00 0.00 3.20
96 97 1.067060 CGAGCGAGAGAGAGAGAGAGA 59.933 57.143 0.00 0.00 0.00 3.10
97 98 1.491670 CGAGCGAGAGAGAGAGAGAG 58.508 60.000 0.00 0.00 0.00 3.20
98 99 0.529773 GCGAGCGAGAGAGAGAGAGA 60.530 60.000 0.00 0.00 0.00 3.10
99 100 1.821241 CGCGAGCGAGAGAGAGAGAG 61.821 65.000 12.58 0.00 42.83 3.20
100 101 1.880796 CGCGAGCGAGAGAGAGAGA 60.881 63.158 12.58 0.00 42.83 3.10
244 278 4.596354 ATTCCAACCCGTAAACCCTAAT 57.404 40.909 0.00 0.00 0.00 1.73
286 323 9.057089 GGTGAAATTAGAACATGTAGATTAGGG 57.943 37.037 0.00 0.00 0.00 3.53
365 451 1.990799 TCAGGTGTTTGATAGCGACG 58.009 50.000 0.00 0.00 0.00 5.12
401 487 4.766891 CCATGGAGTATCAGGTGTGTTTTT 59.233 41.667 5.56 0.00 36.25 1.94
402 488 4.042809 TCCATGGAGTATCAGGTGTGTTTT 59.957 41.667 11.44 0.00 36.25 2.43
403 489 3.587061 TCCATGGAGTATCAGGTGTGTTT 59.413 43.478 11.44 0.00 36.25 2.83
404 490 3.181329 TCCATGGAGTATCAGGTGTGTT 58.819 45.455 11.44 0.00 36.25 3.32
405 491 2.832838 TCCATGGAGTATCAGGTGTGT 58.167 47.619 11.44 0.00 36.25 3.72
406 492 3.645212 AGATCCATGGAGTATCAGGTGTG 59.355 47.826 21.33 0.00 36.25 3.82
416 502 5.715439 TCCAACATTAAGATCCATGGAGT 57.285 39.130 21.33 10.41 32.10 3.85
626 731 0.393132 GACCAGCCCCTTCTAAGCAC 60.393 60.000 0.00 0.00 0.00 4.40
648 757 5.298276 ACTTAGCCTACTCTGAGAAATCTCG 59.702 44.000 12.44 1.84 45.72 4.04
649 758 6.512741 CGACTTAGCCTACTCTGAGAAATCTC 60.513 46.154 12.44 3.43 43.15 2.75
650 759 5.298276 CGACTTAGCCTACTCTGAGAAATCT 59.702 44.000 12.44 5.72 0.00 2.40
651 760 5.297278 TCGACTTAGCCTACTCTGAGAAATC 59.703 44.000 12.44 0.00 0.00 2.17
688 800 3.636679 ACAGGCTGCTGAGAGTAATAGA 58.363 45.455 15.89 0.00 0.00 1.98
769 898 7.588512 AGACAGAACTGTGCAAAATATTCTTC 58.411 34.615 12.29 0.00 45.05 2.87
812 942 4.201851 CCATGTCTGCGACCAAAATTAGAG 60.202 45.833 6.30 0.00 0.00 2.43
826 966 4.327982 TGAGACTATAAGCCATGTCTGC 57.672 45.455 0.00 0.00 39.53 4.26
830 970 9.094578 AGTACAATATGAGACTATAAGCCATGT 57.905 33.333 0.00 0.00 0.00 3.21
872 1018 8.673711 TCATTTAGGATCAAATTAAACTCCACG 58.326 33.333 0.00 0.00 0.00 4.94
979 1131 3.870538 TGCAGCTTCTGGGATAATGAT 57.129 42.857 0.00 0.00 31.21 2.45
980 1132 3.650281 TTGCAGCTTCTGGGATAATGA 57.350 42.857 0.00 0.00 31.21 2.57
981 1133 3.887110 TCATTGCAGCTTCTGGGATAATG 59.113 43.478 0.00 0.00 31.21 1.90
1201 1395 3.837355 AGGGATGCCAATTGATACCTTC 58.163 45.455 7.12 0.79 0.00 3.46
1318 1548 3.322254 AGACCCGGAGTGAAGCATTATAG 59.678 47.826 0.73 0.00 0.00 1.31
1489 1722 2.159296 GGGTGTATTTTGCGATTGGTCC 60.159 50.000 0.00 0.00 0.00 4.46
1530 1763 3.056313 GCAGATTCCACTTGGCGCC 62.056 63.158 22.73 22.73 34.44 6.53
1609 1842 0.031178 CAGCCTGCTTGGTTTGTGAC 59.969 55.000 0.00 0.00 38.35 3.67
2093 2731 5.645067 TCATGCTAGAACAATTGACCTTCTG 59.355 40.000 13.59 7.24 0.00 3.02
2298 2940 1.907936 AAGACTGCATCTTCTGAGGCT 59.092 47.619 4.42 0.00 44.99 4.58
2333 2975 1.691976 ACCTTCATTCAGTGTCGTGGA 59.308 47.619 0.00 0.00 0.00 4.02
2397 3039 5.870433 TGGTGCAGCAATGAAGAATAATTTG 59.130 36.000 17.80 0.00 0.00 2.32
2460 3103 0.698238 TGCTTTATGTGCCTGAGGGT 59.302 50.000 0.00 0.00 34.45 4.34
2533 3257 1.916874 TCCCATGGGTACATTTTCGGA 59.083 47.619 30.28 3.21 34.35 4.55
2625 3512 4.761235 ACAAACTCATCTTGCATGTCTG 57.239 40.909 0.00 0.00 0.00 3.51
2686 3573 7.907045 GTGTCATCATGTAGCATTTTACTTCTG 59.093 37.037 0.00 0.00 0.00 3.02
2890 3799 4.405680 TGGTCCTGGATATCAACAGTACAG 59.594 45.833 4.83 0.81 32.90 2.74
3064 3973 4.026310 GCATTGAAAGTTGCAAAGTCAGTG 60.026 41.667 18.61 18.61 38.72 3.66
3188 4107 5.202004 ACAGATGGGGTAGTACTCTGTAAG 58.798 45.833 17.02 2.24 43.42 2.34
3297 6030 6.542370 GGAGCTCTGCCAATAATGTTTAACTA 59.458 38.462 14.64 0.00 0.00 2.24
4038 10831 6.916360 TTTGCCTCTTTTACCATCTTTCAT 57.084 33.333 0.00 0.00 0.00 2.57
4063 10859 3.116531 GCGAAGGTAAGCGCCGTT 61.117 61.111 2.29 0.00 46.93 4.44
4486 11287 4.749245 AAGATGTTGTTTCTTGGTAGCG 57.251 40.909 0.00 0.00 32.30 4.26
4550 11360 9.935241 CTGCACCTCTAATATATGTGATACTTT 57.065 33.333 4.72 0.00 0.00 2.66
4588 11399 5.304686 TCCCTGAAAGTACAGTTGAATGT 57.695 39.130 0.00 0.00 36.30 2.71
4699 11510 7.199766 TGATTCACAATAACAGACCACAAAAC 58.800 34.615 0.00 0.00 0.00 2.43
4794 11605 7.210174 GCACAATGGATCAGAATACTAGTACA 58.790 38.462 4.31 0.00 0.00 2.90
4795 11606 6.647067 GGCACAATGGATCAGAATACTAGTAC 59.353 42.308 4.31 0.00 0.00 2.73
4803 11614 3.285484 GAGTGGCACAATGGATCAGAAT 58.715 45.455 21.41 0.00 44.16 2.40
4981 12151 9.121517 GGATTCTTTATATGCATTCAACATTCG 57.878 33.333 3.54 0.00 0.00 3.34
5002 12172 9.803315 CTATTTAAGCTTAGTTTTTGGGGATTC 57.197 33.333 6.24 0.00 0.00 2.52
5003 12173 8.758829 CCTATTTAAGCTTAGTTTTTGGGGATT 58.241 33.333 6.24 0.00 0.00 3.01
5066 12245 3.119388 TGGCACTGATTTTATGCTTCAGC 60.119 43.478 0.00 0.00 40.40 4.26
5290 12505 9.220767 GTAGAAGATACTCCAAAGATGTTTTGT 57.779 33.333 0.00 0.00 0.00 2.83
5394 12963 4.395231 GCCTGGTCAAACATACCTAACTTC 59.605 45.833 0.00 0.00 37.91 3.01
5405 12974 0.320421 GCGACTAGCCTGGTCAAACA 60.320 55.000 9.01 0.00 40.81 2.83
5417 12988 2.000447 GCTAACCAAACAGGCGACTAG 59.000 52.381 0.00 0.00 43.14 2.57
5565 13318 4.095483 ACTGTTCTTGTTGCTCTGAAACAG 59.905 41.667 11.15 11.15 38.67 3.16
5566 13319 4.009675 ACTGTTCTTGTTGCTCTGAAACA 58.990 39.130 0.00 0.00 35.78 2.83
5653 13406 4.641989 TGATAGGCTTCAAATTCCTCAAGC 59.358 41.667 0.00 0.00 40.52 4.01
5758 13513 7.393234 AGTTTGCAATAAATAGTCCAGCAAGTA 59.607 33.333 0.00 0.00 40.92 2.24
5778 13533 4.437930 GGAGTTCATGCAGTATCAGTTTGC 60.438 45.833 0.00 0.00 38.30 3.68
5938 13711 4.545610 ACCACATTATTCAGCAACAAACG 58.454 39.130 0.00 0.00 0.00 3.60
6093 13908 7.136822 TCTTCAAGTGGCTGTATGGTTATAT 57.863 36.000 0.00 0.00 0.00 0.86
6094 13909 6.553953 TCTTCAAGTGGCTGTATGGTTATA 57.446 37.500 0.00 0.00 0.00 0.98
6097 13912 3.788227 TCTTCAAGTGGCTGTATGGTT 57.212 42.857 0.00 0.00 0.00 3.67
6099 13914 4.946157 AGATTTCTTCAAGTGGCTGTATGG 59.054 41.667 0.00 0.00 0.00 2.74
6273 14110 3.334583 TCTGAACCTCCGAGATTTTGG 57.665 47.619 0.00 0.00 0.00 3.28
6301 14138 5.004361 TGGGGTTTAGGAATGATGTTTGA 57.996 39.130 0.00 0.00 0.00 2.69
6332 14177 8.470002 GGAAAAGGTTAGCATTTGATCAATACT 58.530 33.333 9.40 9.46 0.00 2.12
6368 14218 3.296709 TTCCGGGCTCTCTGCGAAC 62.297 63.158 0.00 0.00 44.05 3.95
6459 14309 7.558444 GCCTTAGCTATCTATCTATGGTGTAGT 59.442 40.741 0.00 0.00 34.43 2.73
6466 14316 6.460399 GGTTCCGCCTTAGCTATCTATCTATG 60.460 46.154 0.00 0.00 36.60 2.23
6570 14432 4.022849 GCTGAACTGTAAGCAAATGAACCT 60.023 41.667 9.75 0.00 39.31 3.50
6593 14464 6.155827 GCTATGCTCCTAGACATAGTTCAAG 58.844 44.000 19.72 5.73 44.94 3.02
6604 14475 2.587522 ACACGATGCTATGCTCCTAGA 58.412 47.619 0.00 0.00 0.00 2.43
6623 14516 5.952033 ACTCAAAGTGGTAGAGATCGTAAC 58.048 41.667 0.00 0.00 33.69 2.50
6657 14550 2.004017 CTTGCGCGGATGGTAAGTTAA 58.996 47.619 8.83 0.00 0.00 2.01
6672 14565 2.664916 CAAGAATTGTGGGAACTTGCG 58.335 47.619 0.00 0.00 42.34 4.85
6685 14578 5.390885 CCACGACACGATTCATTCAAGAATT 60.391 40.000 0.00 0.00 38.30 2.17
6692 14609 1.659098 GACCCACGACACGATTCATTC 59.341 52.381 0.00 0.00 0.00 2.67
6710 14627 7.031372 TGTACTGGATCGTTACATTACTTGAC 58.969 38.462 7.49 0.00 0.00 3.18
6713 14630 8.836268 TTTTGTACTGGATCGTTACATTACTT 57.164 30.769 7.49 0.00 0.00 2.24
6741 14658 5.336729 GCAAATTCAACGTAAGCATTTTTGC 59.663 36.000 11.61 11.61 45.62 3.68
6742 14659 6.570789 CAGCAAATTCAACGTAAGCATTTTTG 59.429 34.615 0.00 0.00 45.62 2.44
6743 14660 6.648502 CAGCAAATTCAACGTAAGCATTTTT 58.351 32.000 0.00 0.00 45.62 1.94
6744 14661 5.333263 GCAGCAAATTCAACGTAAGCATTTT 60.333 36.000 0.00 0.00 45.62 1.82
6754 14673 1.722464 CACATGGCAGCAAATTCAACG 59.278 47.619 0.00 0.00 0.00 4.10
6818 14743 8.570068 AAGAGTACACTTGGTAACTTCAAAAA 57.430 30.769 4.64 0.00 32.72 1.94
6819 14744 8.044908 AGAAGAGTACACTTGGTAACTTCAAAA 58.955 33.333 10.46 0.00 42.97 2.44
6820 14745 7.494625 CAGAAGAGTACACTTGGTAACTTCAAA 59.505 37.037 10.46 0.00 42.97 2.69
6821 14746 6.984474 CAGAAGAGTACACTTGGTAACTTCAA 59.016 38.462 10.46 0.00 42.97 2.69
6822 14747 6.462487 CCAGAAGAGTACACTTGGTAACTTCA 60.462 42.308 10.46 0.00 42.97 3.02
6823 14748 5.927115 CCAGAAGAGTACACTTGGTAACTTC 59.073 44.000 10.46 0.00 42.04 3.01
6824 14749 5.365895 ACCAGAAGAGTACACTTGGTAACTT 59.634 40.000 13.19 0.00 35.23 2.66
6825 14750 4.900054 ACCAGAAGAGTACACTTGGTAACT 59.100 41.667 13.19 1.19 32.72 2.24
6826 14751 4.989168 CACCAGAAGAGTACACTTGGTAAC 59.011 45.833 14.10 0.00 32.72 2.50
6827 14752 4.039973 CCACCAGAAGAGTACACTTGGTAA 59.960 45.833 14.10 0.00 32.72 2.85
6828 14753 3.576982 CCACCAGAAGAGTACACTTGGTA 59.423 47.826 14.10 0.00 29.23 3.25
6829 14754 2.368875 CCACCAGAAGAGTACACTTGGT 59.631 50.000 10.46 10.20 29.95 3.67
6830 14755 2.872038 GCCACCAGAAGAGTACACTTGG 60.872 54.545 10.46 9.57 0.00 3.61
6842 14767 4.038271 AGAATCAAAGATGCCACCAGAA 57.962 40.909 0.00 0.00 0.00 3.02
6881 14809 7.041916 CCAAATCTGATGCACAAAAGCTAAAAA 60.042 33.333 0.00 0.00 34.99 1.94
6885 14813 4.766373 TCCAAATCTGATGCACAAAAGCTA 59.234 37.500 0.00 0.00 34.99 3.32
6899 14827 8.838365 CCTCTAATTTCTTCTGATCCAAATCTG 58.162 37.037 0.00 0.00 32.75 2.90
6943 14871 0.320421 TTTTTCGTCCTCCGCCTCTG 60.320 55.000 0.00 0.00 36.19 3.35
6944 14872 2.055299 TTTTTCGTCCTCCGCCTCT 58.945 52.632 0.00 0.00 36.19 3.69
6945 14873 4.687464 TTTTTCGTCCTCCGCCTC 57.313 55.556 0.00 0.00 36.19 4.70
6961 14889 4.583073 AGACTTCGCCACACCTTAAATTTT 59.417 37.500 0.00 0.00 0.00 1.82
6963 14891 3.751518 AGACTTCGCCACACCTTAAATT 58.248 40.909 0.00 0.00 0.00 1.82
6966 14894 2.922740 AAGACTTCGCCACACCTTAA 57.077 45.000 0.00 0.00 0.00 1.85
6968 14896 2.550208 CCTTAAGACTTCGCCACACCTT 60.550 50.000 3.36 0.00 0.00 3.50
6969 14897 1.002087 CCTTAAGACTTCGCCACACCT 59.998 52.381 3.36 0.00 0.00 4.00
6971 14899 2.450609 TCCTTAAGACTTCGCCACAC 57.549 50.000 3.36 0.00 0.00 3.82
6973 14901 3.660865 TCTTTCCTTAAGACTTCGCCAC 58.339 45.455 3.36 0.00 37.96 5.01
6974 14902 4.345859 TTCTTTCCTTAAGACTTCGCCA 57.654 40.909 3.36 0.00 42.50 5.69
6975 14903 5.870444 GAATTCTTTCCTTAAGACTTCGCC 58.130 41.667 3.36 0.00 42.50 5.54
6982 14910 8.859090 TGCATCAAAAGAATTCTTTCCTTAAGA 58.141 29.630 28.87 19.83 44.69 2.10
6984 14912 9.829507 TTTGCATCAAAAGAATTCTTTCCTTAA 57.170 25.926 28.87 17.64 44.69 1.85
6986 14914 8.913487 ATTTGCATCAAAAGAATTCTTTCCTT 57.087 26.923 28.87 14.42 44.69 3.36
6987 14915 7.330208 CGATTTGCATCAAAAGAATTCTTTCCT 59.670 33.333 28.87 15.08 44.69 3.36
6988 14916 7.329226 TCGATTTGCATCAAAAGAATTCTTTCC 59.671 33.333 28.87 16.77 44.69 3.13
6989 14917 8.231304 TCGATTTGCATCAAAAGAATTCTTTC 57.769 30.769 28.87 18.24 44.69 2.62
6991 14919 8.592105 TTTCGATTTGCATCAAAAGAATTCTT 57.408 26.923 15.11 15.11 36.90 2.52
6993 14921 8.231304 TCTTTCGATTTGCATCAAAAGAATTC 57.769 30.769 1.75 0.00 38.82 2.17
6994 14922 7.869429 ACTCTTTCGATTTGCATCAAAAGAATT 59.131 29.630 5.26 0.00 40.44 2.17
6995 14923 7.373493 ACTCTTTCGATTTGCATCAAAAGAAT 58.627 30.769 5.26 0.00 40.44 2.40
6997 14925 6.017192 TGACTCTTTCGATTTGCATCAAAAGA 60.017 34.615 3.96 3.96 39.26 2.52
6998 14926 6.144854 TGACTCTTTCGATTTGCATCAAAAG 58.855 36.000 0.00 0.00 35.49 2.27
7000 14928 5.687770 TGACTCTTTCGATTTGCATCAAA 57.312 34.783 0.00 0.00 37.75 2.69
7002 14930 5.885230 ATTGACTCTTTCGATTTGCATCA 57.115 34.783 0.00 0.00 0.00 3.07
7003 14931 6.775088 TGTATTGACTCTTTCGATTTGCATC 58.225 36.000 0.00 0.00 30.17 3.91
7004 14932 6.595326 TCTGTATTGACTCTTTCGATTTGCAT 59.405 34.615 0.00 0.00 30.17 3.96
7006 14934 6.408858 TCTGTATTGACTCTTTCGATTTGC 57.591 37.500 0.00 0.00 30.17 3.68
7007 14935 9.907576 GTAATCTGTATTGACTCTTTCGATTTG 57.092 33.333 0.00 0.00 30.17 2.32
7008 14936 9.653287 TGTAATCTGTATTGACTCTTTCGATTT 57.347 29.630 0.00 0.00 30.17 2.17
7009 14937 9.653287 TTGTAATCTGTATTGACTCTTTCGATT 57.347 29.630 0.00 0.00 30.17 3.34
7011 14939 7.544566 GGTTGTAATCTGTATTGACTCTTTCGA 59.455 37.037 0.00 0.00 0.00 3.71
7012 14940 7.462856 CGGTTGTAATCTGTATTGACTCTTTCG 60.463 40.741 0.00 0.00 0.00 3.46
7013 14941 7.544566 TCGGTTGTAATCTGTATTGACTCTTTC 59.455 37.037 0.00 0.00 0.00 2.62
7016 14944 6.525578 TCGGTTGTAATCTGTATTGACTCT 57.474 37.500 0.00 0.00 0.00 3.24
7017 14945 7.591006 TTTCGGTTGTAATCTGTATTGACTC 57.409 36.000 0.00 0.00 0.00 3.36
7018 14946 7.972832 TTTTCGGTTGTAATCTGTATTGACT 57.027 32.000 0.00 0.00 0.00 3.41
7050 14978 9.723601 ATTGAAACATGCCTACATTTTTATTGT 57.276 25.926 0.00 0.00 36.53 2.71
7054 14982 9.249053 TCCTATTGAAACATGCCTACATTTTTA 57.751 29.630 0.00 0.00 36.53 1.52
7055 14983 8.133024 TCCTATTGAAACATGCCTACATTTTT 57.867 30.769 0.00 0.00 38.55 1.94
7056 14984 7.716799 TCCTATTGAAACATGCCTACATTTT 57.283 32.000 0.00 0.00 32.87 1.82
7058 14986 7.716799 TTTCCTATTGAAACATGCCTACATT 57.283 32.000 0.00 0.00 38.04 2.71
7059 14987 7.178274 TGTTTTCCTATTGAAACATGCCTACAT 59.822 33.333 0.00 0.00 42.56 2.29
7061 14989 6.919721 TGTTTTCCTATTGAAACATGCCTAC 58.080 36.000 0.00 0.00 42.56 3.18
7062 14990 7.232534 AGTTGTTTTCCTATTGAAACATGCCTA 59.767 33.333 0.00 0.00 42.56 3.93
7063 14991 6.041979 AGTTGTTTTCCTATTGAAACATGCCT 59.958 34.615 0.00 0.00 42.56 4.75
7064 14992 6.223120 AGTTGTTTTCCTATTGAAACATGCC 58.777 36.000 0.00 0.00 42.56 4.40
7065 14993 7.713764 AAGTTGTTTTCCTATTGAAACATGC 57.286 32.000 0.00 0.95 42.56 4.06
7093 15021 9.950680 CCATTGAAAGCTTTATTATCGTTATGT 57.049 29.630 12.68 0.00 0.00 2.29
7094 15022 8.905702 GCCATTGAAAGCTTTATTATCGTTATG 58.094 33.333 12.68 5.02 0.00 1.90
7095 15023 7.803189 CGCCATTGAAAGCTTTATTATCGTTAT 59.197 33.333 12.68 0.00 0.00 1.89
7096 15024 7.129622 CGCCATTGAAAGCTTTATTATCGTTA 58.870 34.615 12.68 0.00 0.00 3.18
7097 15025 5.971202 CGCCATTGAAAGCTTTATTATCGTT 59.029 36.000 12.68 0.00 0.00 3.85
7098 15026 5.505654 CCGCCATTGAAAGCTTTATTATCGT 60.506 40.000 12.68 0.00 0.00 3.73
7100 15028 4.681483 GCCGCCATTGAAAGCTTTATTATC 59.319 41.667 12.68 0.00 0.00 1.75
7101 15029 4.342092 AGCCGCCATTGAAAGCTTTATTAT 59.658 37.500 12.68 3.10 0.00 1.28
7102 15030 3.699038 AGCCGCCATTGAAAGCTTTATTA 59.301 39.130 12.68 0.56 0.00 0.98
7103 15031 2.497273 AGCCGCCATTGAAAGCTTTATT 59.503 40.909 12.68 0.00 0.00 1.40
7106 15034 0.244721 GAGCCGCCATTGAAAGCTTT 59.755 50.000 12.53 12.53 32.97 3.51
7107 15035 0.895100 TGAGCCGCCATTGAAAGCTT 60.895 50.000 0.00 0.00 32.97 3.74
7109 15037 0.174162 ATTGAGCCGCCATTGAAAGC 59.826 50.000 0.00 0.00 0.00 3.51
7110 15038 1.473677 TCATTGAGCCGCCATTGAAAG 59.526 47.619 0.00 0.00 0.00 2.62
7111 15039 1.202114 GTCATTGAGCCGCCATTGAAA 59.798 47.619 7.55 0.00 31.02 2.69
7112 15040 0.810648 GTCATTGAGCCGCCATTGAA 59.189 50.000 7.55 0.00 31.02 2.69
7114 15042 1.434696 GGTCATTGAGCCGCCATTG 59.565 57.895 4.48 0.00 0.00 2.82
7122 15050 0.458669 CATTGCCTGGGTCATTGAGC 59.541 55.000 7.33 7.33 0.00 4.26
7123 15051 1.108776 CCATTGCCTGGGTCATTGAG 58.891 55.000 0.00 0.00 41.82 3.02
7124 15052 0.971959 GCCATTGCCTGGGTCATTGA 60.972 55.000 4.72 0.00 46.06 2.57
7125 15053 1.259142 TGCCATTGCCTGGGTCATTG 61.259 55.000 4.72 0.00 46.06 2.82
7126 15054 0.544833 TTGCCATTGCCTGGGTCATT 60.545 50.000 4.72 0.00 46.06 2.57
7127 15055 0.325860 ATTGCCATTGCCTGGGTCAT 60.326 50.000 4.72 0.00 46.06 3.06
7128 15056 1.078891 ATTGCCATTGCCTGGGTCA 59.921 52.632 4.72 0.00 46.06 4.02
7129 15057 1.518774 CATTGCCATTGCCTGGGTC 59.481 57.895 4.72 0.00 46.06 4.46
7130 15058 2.662070 GCATTGCCATTGCCTGGGT 61.662 57.895 0.00 0.00 46.06 4.51
7131 15059 2.188469 GCATTGCCATTGCCTGGG 59.812 61.111 0.00 0.00 46.06 4.45
7142 15070 1.683385 GAAATGAGGGTAGGGCATTGC 59.317 52.381 0.00 0.00 32.96 3.56
7143 15071 2.954318 CAGAAATGAGGGTAGGGCATTG 59.046 50.000 0.00 0.00 32.96 2.82
7144 15072 2.852449 TCAGAAATGAGGGTAGGGCATT 59.148 45.455 0.00 0.00 33.96 3.56
7145 15073 2.492025 TCAGAAATGAGGGTAGGGCAT 58.508 47.619 0.00 0.00 0.00 4.40
7146 15074 1.965414 TCAGAAATGAGGGTAGGGCA 58.035 50.000 0.00 0.00 0.00 5.36
7147 15075 3.366052 TTTCAGAAATGAGGGTAGGGC 57.634 47.619 0.00 0.00 0.00 5.19
7149 15077 7.613411 AGAAAGATTTTCAGAAATGAGGGTAGG 59.387 37.037 0.00 0.00 35.65 3.18
7150 15078 8.572855 AGAAAGATTTTCAGAAATGAGGGTAG 57.427 34.615 0.00 0.00 35.65 3.18
7151 15079 8.940397 AAGAAAGATTTTCAGAAATGAGGGTA 57.060 30.769 0.00 0.00 35.65 3.69
7152 15080 7.846101 AAGAAAGATTTTCAGAAATGAGGGT 57.154 32.000 0.00 0.00 35.65 4.34
7178 15106 9.981114 CTTCAAAAGTATTGGTCTTGGTAAAAT 57.019 29.630 0.00 0.00 0.00 1.82
7179 15107 9.191479 TCTTCAAAAGTATTGGTCTTGGTAAAA 57.809 29.630 0.00 0.00 0.00 1.52
7180 15108 8.754991 TCTTCAAAAGTATTGGTCTTGGTAAA 57.245 30.769 0.00 0.00 0.00 2.01
7181 15109 8.934023 ATCTTCAAAAGTATTGGTCTTGGTAA 57.066 30.769 0.00 0.00 0.00 2.85
7182 15110 8.383175 AGATCTTCAAAAGTATTGGTCTTGGTA 58.617 33.333 0.00 0.00 0.00 3.25
7183 15111 7.234355 AGATCTTCAAAAGTATTGGTCTTGGT 58.766 34.615 0.00 0.00 0.00 3.67
7184 15112 7.609532 AGAGATCTTCAAAAGTATTGGTCTTGG 59.390 37.037 0.00 0.00 0.00 3.61
7186 15114 7.547370 CGAGAGATCTTCAAAAGTATTGGTCTT 59.453 37.037 0.00 0.00 0.00 3.01
7187 15115 7.038659 CGAGAGATCTTCAAAAGTATTGGTCT 58.961 38.462 0.00 0.00 0.00 3.85
7188 15116 6.237969 GCGAGAGATCTTCAAAAGTATTGGTC 60.238 42.308 0.00 0.00 0.00 4.02
7189 15117 5.582665 GCGAGAGATCTTCAAAAGTATTGGT 59.417 40.000 0.00 0.00 0.00 3.67
7190 15118 5.814705 AGCGAGAGATCTTCAAAAGTATTGG 59.185 40.000 0.00 0.00 0.00 3.16
7206 15134 6.127451 TGAGGTTTGTTATATTGAGCGAGAGA 60.127 38.462 0.00 0.00 0.00 3.10
7208 15136 5.972935 TGAGGTTTGTTATATTGAGCGAGA 58.027 37.500 0.00 0.00 0.00 4.04
7209 15137 6.662414 TTGAGGTTTGTTATATTGAGCGAG 57.338 37.500 0.00 0.00 0.00 5.03
7210 15138 5.064707 GCTTGAGGTTTGTTATATTGAGCGA 59.935 40.000 0.00 0.00 0.00 4.93
7211 15139 5.266242 GCTTGAGGTTTGTTATATTGAGCG 58.734 41.667 0.00 0.00 0.00 5.03
7212 15140 5.125417 TGGCTTGAGGTTTGTTATATTGAGC 59.875 40.000 0.00 0.00 0.00 4.26
7213 15141 6.757897 TGGCTTGAGGTTTGTTATATTGAG 57.242 37.500 0.00 0.00 0.00 3.02
7215 15143 9.520204 CTTAATGGCTTGAGGTTTGTTATATTG 57.480 33.333 0.00 0.00 0.00 1.90
7216 15144 8.197439 GCTTAATGGCTTGAGGTTTGTTATATT 58.803 33.333 0.00 0.00 0.00 1.28
7218 15146 6.096282 GGCTTAATGGCTTGAGGTTTGTTATA 59.904 38.462 0.00 0.00 38.32 0.98
7220 15148 4.219725 GGCTTAATGGCTTGAGGTTTGTTA 59.780 41.667 0.00 0.00 38.32 2.41
7221 15149 3.006859 GGCTTAATGGCTTGAGGTTTGTT 59.993 43.478 0.00 0.00 38.32 2.83
7222 15150 2.562738 GGCTTAATGGCTTGAGGTTTGT 59.437 45.455 0.00 0.00 38.32 2.83
7223 15151 2.562298 TGGCTTAATGGCTTGAGGTTTG 59.438 45.455 0.00 0.00 42.34 2.93
7224 15152 2.888212 TGGCTTAATGGCTTGAGGTTT 58.112 42.857 0.00 0.00 42.34 3.27
7225 15153 2.562738 GTTGGCTTAATGGCTTGAGGTT 59.437 45.455 0.00 0.00 42.34 3.50
7226 15154 2.171003 GTTGGCTTAATGGCTTGAGGT 58.829 47.619 0.00 0.00 42.34 3.85
7228 15156 2.170166 TGGTTGGCTTAATGGCTTGAG 58.830 47.619 0.00 0.00 42.34 3.02
7229 15157 2.300956 TGGTTGGCTTAATGGCTTGA 57.699 45.000 0.00 0.00 42.34 3.02
7230 15158 2.480073 CGATGGTTGGCTTAATGGCTTG 60.480 50.000 0.00 0.00 42.34 4.01
7236 15164 2.799126 TGACCGATGGTTGGCTTAAT 57.201 45.000 0.00 0.00 35.25 1.40
7237 15165 2.238646 AGATGACCGATGGTTGGCTTAA 59.761 45.455 0.00 0.00 35.25 1.85
7238 15166 1.837439 AGATGACCGATGGTTGGCTTA 59.163 47.619 0.00 0.00 35.25 3.09
7239 15167 0.620556 AGATGACCGATGGTTGGCTT 59.379 50.000 0.00 0.00 35.25 4.35
7240 15168 0.620556 AAGATGACCGATGGTTGGCT 59.379 50.000 0.00 0.00 35.25 4.75
7241 15169 0.734889 CAAGATGACCGATGGTTGGC 59.265 55.000 0.00 0.00 35.25 4.52
7242 15170 0.734889 GCAAGATGACCGATGGTTGG 59.265 55.000 0.00 0.00 35.25 3.77
7243 15171 1.399440 CAGCAAGATGACCGATGGTTG 59.601 52.381 0.00 0.00 35.25 3.77
7245 15173 0.745845 GCAGCAAGATGACCGATGGT 60.746 55.000 0.00 0.00 39.44 3.55
7246 15174 1.769098 CGCAGCAAGATGACCGATGG 61.769 60.000 0.00 0.00 0.00 3.51
7247 15175 1.640069 CGCAGCAAGATGACCGATG 59.360 57.895 0.00 0.00 0.00 3.84
7248 15176 4.115279 CGCAGCAAGATGACCGAT 57.885 55.556 0.00 0.00 0.00 4.18
7260 15188 2.536718 ATCAAGACTGAGTTGCGCAGC 61.537 52.381 17.28 17.28 45.85 5.25
7261 15189 1.128136 CATCAAGACTGAGTTGCGCAG 59.872 52.381 11.31 0.00 37.31 5.18
7262 15190 1.150827 CATCAAGACTGAGTTGCGCA 58.849 50.000 5.66 5.66 34.23 6.09
7263 15191 1.432514 TCATCAAGACTGAGTTGCGC 58.567 50.000 0.00 0.00 34.23 6.09
7264 15192 4.675190 AAATCATCAAGACTGAGTTGCG 57.325 40.909 0.00 0.00 34.23 4.85
7265 15193 6.005583 TGAAAATCATCAAGACTGAGTTGC 57.994 37.500 0.00 0.00 34.23 4.17
7267 15195 8.400184 TCAATGAAAATCATCAAGACTGAGTT 57.600 30.769 0.00 0.00 35.76 3.01
7268 15196 7.991084 TCAATGAAAATCATCAAGACTGAGT 57.009 32.000 0.00 0.00 35.76 3.41
7270 15198 8.570068 TCATCAATGAAAATCATCAAGACTGA 57.430 30.769 0.00 0.00 35.76 3.41
7271 15199 8.674607 TCTCATCAATGAAAATCATCAAGACTG 58.325 33.333 0.00 0.00 35.76 3.51
7273 15201 9.504710 CTTCTCATCAATGAAAATCATCAAGAC 57.495 33.333 0.00 0.00 35.76 3.01
7274 15202 8.683615 CCTTCTCATCAATGAAAATCATCAAGA 58.316 33.333 0.00 0.00 35.76 3.02
7275 15203 7.435488 GCCTTCTCATCAATGAAAATCATCAAG 59.565 37.037 0.00 0.00 35.76 3.02
7276 15204 7.262772 GCCTTCTCATCAATGAAAATCATCAA 58.737 34.615 0.00 0.00 35.76 2.57
7278 15206 6.214399 GGCCTTCTCATCAATGAAAATCATC 58.786 40.000 0.00 0.00 35.76 2.92
7279 15207 5.070047 GGGCCTTCTCATCAATGAAAATCAT 59.930 40.000 0.84 0.00 39.09 2.45
7280 15208 4.403432 GGGCCTTCTCATCAATGAAAATCA 59.597 41.667 0.84 0.00 36.18 2.57
7281 15209 4.648307 AGGGCCTTCTCATCAATGAAAATC 59.352 41.667 0.00 0.00 36.18 2.17
7282 15210 4.617593 AGGGCCTTCTCATCAATGAAAAT 58.382 39.130 0.00 0.00 36.18 1.82
7283 15211 4.051661 AGGGCCTTCTCATCAATGAAAA 57.948 40.909 0.00 0.00 36.18 2.29
7284 15212 3.744940 AGGGCCTTCTCATCAATGAAA 57.255 42.857 0.00 0.00 36.18 2.69
7286 15214 3.010472 TGAAAGGGCCTTCTCATCAATGA 59.990 43.478 21.20 0.00 35.16 2.57
7287 15215 3.359033 TGAAAGGGCCTTCTCATCAATG 58.641 45.455 21.20 0.00 0.00 2.82
7288 15216 3.744940 TGAAAGGGCCTTCTCATCAAT 57.255 42.857 21.20 0.00 0.00 2.57
7289 15217 3.524095 TTGAAAGGGCCTTCTCATCAA 57.476 42.857 21.20 21.40 0.00 2.57
7290 15218 3.744940 ATTGAAAGGGCCTTCTCATCA 57.255 42.857 21.20 16.56 0.00 3.07
7291 15219 3.766051 ACAATTGAAAGGGCCTTCTCATC 59.234 43.478 21.20 13.93 0.00 2.92
7292 15220 3.782992 ACAATTGAAAGGGCCTTCTCAT 58.217 40.909 21.20 8.68 0.00 2.90
7293 15221 3.243359 ACAATTGAAAGGGCCTTCTCA 57.757 42.857 21.20 20.58 0.00 3.27
7294 15222 3.862264 GCAACAATTGAAAGGGCCTTCTC 60.862 47.826 21.20 18.35 0.00 2.87
7295 15223 2.037641 GCAACAATTGAAAGGGCCTTCT 59.962 45.455 21.20 9.98 0.00 2.85
7297 15225 1.072173 GGCAACAATTGAAAGGGCCTT 59.928 47.619 14.48 14.48 37.00 4.35
7298 15226 0.686789 GGCAACAATTGAAAGGGCCT 59.313 50.000 13.59 0.00 37.00 5.19
7300 15228 0.033366 ACGGCAACAATTGAAAGGGC 59.967 50.000 13.59 9.29 0.00 5.19
7302 15230 1.685302 CGACGGCAACAATTGAAAGG 58.315 50.000 13.59 0.00 0.00 3.11
7303 15231 1.052287 GCGACGGCAACAATTGAAAG 58.948 50.000 13.59 2.35 39.62 2.62
7304 15232 0.665835 AGCGACGGCAACAATTGAAA 59.334 45.000 13.59 0.00 43.41 2.69
7305 15233 1.195900 GTAGCGACGGCAACAATTGAA 59.804 47.619 13.59 0.00 43.41 2.69
7310 15238 2.735478 CGGTAGCGACGGCAACAA 60.735 61.111 9.07 0.00 43.41 2.83
7311 15239 4.728102 CCGGTAGCGACGGCAACA 62.728 66.667 17.33 0.00 45.34 3.33
7317 15245 0.864797 GCTTTCTACCGGTAGCGACG 60.865 60.000 32.84 21.85 33.32 5.12
7318 15246 0.171903 TGCTTTCTACCGGTAGCGAC 59.828 55.000 32.84 22.04 36.43 5.19
7319 15247 1.108776 ATGCTTTCTACCGGTAGCGA 58.891 50.000 32.84 21.86 36.43 4.93
7320 15248 2.662700 CTATGCTTTCTACCGGTAGCG 58.337 52.381 32.84 23.57 36.43 4.26
7323 15251 2.390696 TGGCTATGCTTTCTACCGGTA 58.609 47.619 14.95 14.95 0.00 4.02
7324 15252 1.200519 TGGCTATGCTTTCTACCGGT 58.799 50.000 13.98 13.98 0.00 5.28
7325 15253 1.940613 GTTGGCTATGCTTTCTACCGG 59.059 52.381 0.00 0.00 0.00 5.28
7326 15254 2.866762 GAGTTGGCTATGCTTTCTACCG 59.133 50.000 0.00 0.00 0.00 4.02
7328 15256 5.586243 TCATTGAGTTGGCTATGCTTTCTAC 59.414 40.000 0.00 0.00 0.00 2.59
7329 15257 5.744171 TCATTGAGTTGGCTATGCTTTCTA 58.256 37.500 0.00 0.00 0.00 2.10
7330 15258 4.592942 TCATTGAGTTGGCTATGCTTTCT 58.407 39.130 0.00 0.00 0.00 2.52
7331 15259 4.637534 TCTCATTGAGTTGGCTATGCTTTC 59.362 41.667 13.23 0.00 0.00 2.62
7332 15260 4.592942 TCTCATTGAGTTGGCTATGCTTT 58.407 39.130 13.23 0.00 0.00 3.51
7333 15261 4.226427 TCTCATTGAGTTGGCTATGCTT 57.774 40.909 13.23 0.00 0.00 3.91
7334 15262 3.920231 TCTCATTGAGTTGGCTATGCT 57.080 42.857 13.23 0.00 0.00 3.79
7336 15264 8.218338 AGTAATTTCTCATTGAGTTGGCTATG 57.782 34.615 13.23 0.00 0.00 2.23
7338 15266 8.318412 TGTAGTAATTTCTCATTGAGTTGGCTA 58.682 33.333 13.23 7.24 0.00 3.93
7339 15267 7.168219 TGTAGTAATTTCTCATTGAGTTGGCT 58.832 34.615 13.23 8.04 0.00 4.75
7340 15268 7.377766 TGTAGTAATTTCTCATTGAGTTGGC 57.622 36.000 13.23 1.70 0.00 4.52
7362 15290 9.764363 GGAAAGAGGTAATTTCTGAAATTTTGT 57.236 29.630 27.59 15.28 41.16 2.83
7363 15291 9.208022 GGGAAAGAGGTAATTTCTGAAATTTTG 57.792 33.333 27.59 0.00 41.16 2.44
7365 15293 8.727100 AGGGAAAGAGGTAATTTCTGAAATTT 57.273 30.769 27.59 14.13 41.16 1.82
7366 15294 8.727100 AAGGGAAAGAGGTAATTTCTGAAATT 57.273 30.769 26.19 26.19 43.19 1.82
7367 15295 8.727100 AAAGGGAAAGAGGTAATTTCTGAAAT 57.273 30.769 9.76 9.76 36.96 2.17
7368 15296 8.547481 AAAAGGGAAAGAGGTAATTTCTGAAA 57.453 30.769 5.15 5.15 36.96 2.69
7369 15297 8.004801 AGAAAAGGGAAAGAGGTAATTTCTGAA 58.995 33.333 0.00 0.00 36.96 3.02
7372 15300 8.642432 CAAAGAAAAGGGAAAGAGGTAATTTCT 58.358 33.333 0.00 0.00 37.45 2.52
7373 15301 7.872993 CCAAAGAAAAGGGAAAGAGGTAATTTC 59.127 37.037 0.00 0.00 36.20 2.17
7374 15302 7.567250 TCCAAAGAAAAGGGAAAGAGGTAATTT 59.433 33.333 0.00 0.00 0.00 1.82
7375 15303 7.073208 TCCAAAGAAAAGGGAAAGAGGTAATT 58.927 34.615 0.00 0.00 0.00 1.40
7376 15304 6.620429 TCCAAAGAAAAGGGAAAGAGGTAAT 58.380 36.000 0.00 0.00 0.00 1.89
7377 15305 6.020881 TCCAAAGAAAAGGGAAAGAGGTAA 57.979 37.500 0.00 0.00 0.00 2.85
7378 15306 5.656549 TCCAAAGAAAAGGGAAAGAGGTA 57.343 39.130 0.00 0.00 0.00 3.08
7379 15307 4.536295 TCCAAAGAAAAGGGAAAGAGGT 57.464 40.909 0.00 0.00 0.00 3.85
7380 15308 6.226052 CAAATCCAAAGAAAAGGGAAAGAGG 58.774 40.000 0.00 0.00 33.73 3.69
7382 15310 5.366477 AGCAAATCCAAAGAAAAGGGAAAGA 59.634 36.000 0.00 0.00 33.73 2.52
7383 15311 5.614308 AGCAAATCCAAAGAAAAGGGAAAG 58.386 37.500 0.00 0.00 33.73 2.62
7385 15313 6.739331 TTAGCAAATCCAAAGAAAAGGGAA 57.261 33.333 0.00 0.00 33.73 3.97
7386 15314 6.933514 ATTAGCAAATCCAAAGAAAAGGGA 57.066 33.333 0.00 0.00 34.70 4.20
7399 15327 5.600069 AGAAAGGGGAATGGATTAGCAAATC 59.400 40.000 0.00 0.00 40.77 2.17
7400 15328 5.532155 AGAAAGGGGAATGGATTAGCAAAT 58.468 37.500 0.00 0.00 0.00 2.32
7401 15329 4.946646 AGAAAGGGGAATGGATTAGCAAA 58.053 39.130 0.00 0.00 0.00 3.68
7402 15330 4.608170 AGAAAGGGGAATGGATTAGCAA 57.392 40.909 0.00 0.00 0.00 3.91
7403 15331 5.222130 GGATAGAAAGGGGAATGGATTAGCA 60.222 44.000 0.00 0.00 0.00 3.49
7404 15332 5.222130 TGGATAGAAAGGGGAATGGATTAGC 60.222 44.000 0.00 0.00 0.00 3.09
7405 15333 6.454223 TGGATAGAAAGGGGAATGGATTAG 57.546 41.667 0.00 0.00 0.00 1.73
7407 15335 5.618717 AGATGGATAGAAAGGGGAATGGATT 59.381 40.000 0.00 0.00 0.00 3.01
7408 15336 5.176308 AGATGGATAGAAAGGGGAATGGAT 58.824 41.667 0.00 0.00 0.00 3.41
7409 15337 4.581233 AGATGGATAGAAAGGGGAATGGA 58.419 43.478 0.00 0.00 0.00 3.41
7410 15338 5.074239 AGAAGATGGATAGAAAGGGGAATGG 59.926 44.000 0.00 0.00 0.00 3.16
7411 15339 6.198237 AGAAGATGGATAGAAAGGGGAATG 57.802 41.667 0.00 0.00 0.00 2.67
7413 15341 6.453476 ACTAGAAGATGGATAGAAAGGGGAA 58.547 40.000 0.00 0.00 0.00 3.97
7415 15343 7.857404 TTACTAGAAGATGGATAGAAAGGGG 57.143 40.000 0.00 0.00 0.00 4.79
7416 15344 9.320295 AGATTACTAGAAGATGGATAGAAAGGG 57.680 37.037 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.