Multiple sequence alignment - TraesCS5B01G044200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G044200 chr5B 100.000 4037 0 0 1 4037 49512378 49508342 0.000000e+00 7456.0
1 TraesCS5B01G044200 chr5B 82.496 1114 173 16 1060 2152 49549571 49548459 0.000000e+00 957.0
2 TraesCS5B01G044200 chr5B 79.692 714 126 12 1060 1772 47318024 47317329 7.790000e-137 497.0
3 TraesCS5B01G044200 chr5B 83.702 497 73 6 2148 2641 49544642 49544151 2.840000e-126 462.0
4 TraesCS5B01G044200 chr5D 90.587 2454 160 30 238 2660 46991317 46988904 0.000000e+00 3186.0
5 TraesCS5B01G044200 chr5D 81.461 1068 153 27 1515 2539 47016197 47015132 0.000000e+00 833.0
6 TraesCS5B01G044200 chr5D 85.403 596 66 14 928 1517 47022141 47021561 2.080000e-167 599.0
7 TraesCS5B01G044200 chr5D 76.594 957 184 31 1401 2332 46336898 46337839 1.300000e-134 490.0
8 TraesCS5B01G044200 chr5D 90.000 120 10 2 56 174 46993799 46993681 1.940000e-33 154.0
9 TraesCS5B01G044200 chr5D 96.078 51 2 0 8 58 46994079 46994029 2.590000e-12 84.2
10 TraesCS5B01G044200 chr5A 87.938 1285 114 22 1373 2627 37828603 37827330 0.000000e+00 1476.0
11 TraesCS5B01G044200 chr5A 93.265 683 41 3 2658 3340 37827334 37826657 0.000000e+00 1002.0
12 TraesCS5B01G044200 chr5A 89.046 283 30 1 3340 3622 37826756 37826475 2.310000e-92 350.0
13 TraesCS5B01G044200 chr5A 94.089 203 10 2 3823 4025 37826465 37826265 1.410000e-79 307.0
14 TraesCS5B01G044200 chr5A 81.231 325 41 2 1045 1369 37829388 37829084 1.120000e-60 244.0
15 TraesCS5B01G044200 chr6D 84.247 146 18 5 2890 3034 464610911 464610770 1.960000e-28 137.0
16 TraesCS5B01G044200 chr2A 78.523 149 28 4 2888 3035 423213809 423213954 1.190000e-15 95.3
17 TraesCS5B01G044200 chr4A 87.500 80 8 2 2886 2965 684840476 684840399 1.550000e-14 91.6
18 TraesCS5B01G044200 chr7D 85.000 80 10 2 2885 2963 597121793 597121871 3.340000e-11 80.5
19 TraesCS5B01G044200 chr6B 85.135 74 9 2 2882 2955 77806149 77806220 1.560000e-09 75.0
20 TraesCS5B01G044200 chr4D 86.364 66 8 1 2891 2955 30511539 30511604 2.010000e-08 71.3
21 TraesCS5B01G044200 chr3D 94.872 39 2 0 2916 2954 537308660 537308622 1.210000e-05 62.1
22 TraesCS5B01G044200 chr2B 81.579 76 11 2 2889 2961 41403171 41403246 4.360000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G044200 chr5B 49508342 49512378 4036 True 7456.0 7456 100.000000 1 4037 1 chr5B.!!$R2 4036
1 TraesCS5B01G044200 chr5B 49544151 49549571 5420 True 709.5 957 83.099000 1060 2641 2 chr5B.!!$R3 1581
2 TraesCS5B01G044200 chr5B 47317329 47318024 695 True 497.0 497 79.692000 1060 1772 1 chr5B.!!$R1 712
3 TraesCS5B01G044200 chr5D 46988904 46994079 5175 True 1141.4 3186 92.221667 8 2660 3 chr5D.!!$R3 2652
4 TraesCS5B01G044200 chr5D 47015132 47016197 1065 True 833.0 833 81.461000 1515 2539 1 chr5D.!!$R1 1024
5 TraesCS5B01G044200 chr5D 47021561 47022141 580 True 599.0 599 85.403000 928 1517 1 chr5D.!!$R2 589
6 TraesCS5B01G044200 chr5D 46336898 46337839 941 False 490.0 490 76.594000 1401 2332 1 chr5D.!!$F1 931
7 TraesCS5B01G044200 chr5A 37826265 37829388 3123 True 675.8 1476 89.113800 1045 4025 5 chr5A.!!$R1 2980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 3300 0.099436 GCCAAGGCGAGCAAATACTG 59.901 55.0 0.00 0.0 0.0 2.74 F
1748 4805 0.038166 ACCATTGGAAGGCGTGTGAT 59.962 50.0 10.37 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2668 9638 0.321298 GGTCCTGTGCACAACCGTAT 60.321 55.0 21.73 0.0 0.0 3.06 R
3654 10624 0.035056 CTTCATGTTCCCCTTCGCCT 60.035 55.0 0.00 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 9.361315 TCAAAGATATCAACAAATGAAGCAATG 57.639 29.630 5.32 0.00 42.54 2.82
74 307 2.089349 GCCTTCGTCTCTGCACGTC 61.089 63.158 0.00 0.00 40.79 4.34
76 309 1.285950 CTTCGTCTCTGCACGTCCA 59.714 57.895 0.00 0.00 40.79 4.02
91 324 2.158871 ACGTCCACTTTTCCTAGTTGCA 60.159 45.455 0.00 0.00 0.00 4.08
93 326 3.303791 CGTCCACTTTTCCTAGTTGCAAC 60.304 47.826 22.17 22.17 0.00 4.17
98 331 4.970003 CACTTTTCCTAGTTGCAACTTTCG 59.030 41.667 35.20 22.63 40.37 3.46
99 332 4.879545 ACTTTTCCTAGTTGCAACTTTCGA 59.120 37.500 35.20 23.77 40.37 3.71
102 335 4.265904 TCCTAGTTGCAACTTTCGATCA 57.734 40.909 35.20 15.81 40.37 2.92
112 345 5.351465 TGCAACTTTCGATCAAAGACTATCC 59.649 40.000 18.50 6.60 44.02 2.59
123 356 4.962995 TCAAAGACTATCCAAGTAGGGAGG 59.037 45.833 0.00 0.00 41.08 4.30
134 367 3.390671 TAGGGAGGGCGGGGAGAAG 62.391 68.421 0.00 0.00 0.00 2.85
184 461 7.345653 AGAGAGGATGGTTATTAATGAGACACA 59.654 37.037 0.00 0.00 0.00 3.72
186 463 8.497745 AGAGGATGGTTATTAATGAGACACAAT 58.502 33.333 0.00 0.00 0.00 2.71
187 464 8.455903 AGGATGGTTATTAATGAGACACAATG 57.544 34.615 0.00 0.00 0.00 2.82
188 465 8.274322 AGGATGGTTATTAATGAGACACAATGA 58.726 33.333 0.00 0.00 0.00 2.57
189 466 9.071276 GGATGGTTATTAATGAGACACAATGAT 57.929 33.333 0.00 0.00 0.00 2.45
192 469 9.241919 TGGTTATTAATGAGACACAATGATTGT 57.758 29.630 4.72 4.72 46.75 2.71
205 482 6.713762 ACAATGATTGTGAGGAGAAAACAA 57.286 33.333 10.45 0.00 43.48 2.83
206 483 6.742109 ACAATGATTGTGAGGAGAAAACAAG 58.258 36.000 10.45 0.00 43.48 3.16
207 484 6.322201 ACAATGATTGTGAGGAGAAAACAAGT 59.678 34.615 10.45 0.00 43.48 3.16
208 485 7.502226 ACAATGATTGTGAGGAGAAAACAAGTA 59.498 33.333 10.45 0.00 43.48 2.24
209 486 7.678947 ATGATTGTGAGGAGAAAACAAGTAG 57.321 36.000 0.00 0.00 37.24 2.57
210 487 5.997746 TGATTGTGAGGAGAAAACAAGTAGG 59.002 40.000 0.00 0.00 37.24 3.18
211 488 5.623956 TTGTGAGGAGAAAACAAGTAGGA 57.376 39.130 0.00 0.00 30.62 2.94
217 494 4.775253 AGGAGAAAACAAGTAGGAGAGAGG 59.225 45.833 0.00 0.00 0.00 3.69
223 500 4.871871 ACAAGTAGGAGAGAGGATCAGA 57.128 45.455 0.00 0.00 37.82 3.27
227 504 6.323739 ACAAGTAGGAGAGAGGATCAGAATTC 59.676 42.308 0.00 0.00 37.82 2.17
231 508 3.634448 GGAGAGAGGATCAGAATTCGTCA 59.366 47.826 0.00 0.00 37.82 4.35
251 2806 6.706716 TCGTCACTACATAAATGAAAACCACA 59.293 34.615 0.00 0.00 0.00 4.17
265 2820 7.250445 TGAAAACCACATATCATCATCTTCG 57.750 36.000 0.00 0.00 0.00 3.79
268 2823 4.887748 ACCACATATCATCATCTTCGACC 58.112 43.478 0.00 0.00 0.00 4.79
426 2981 6.115446 TCCAGCCAGACAACATAATAAAGAG 58.885 40.000 0.00 0.00 0.00 2.85
502 3060 8.289939 AGTACAAGATCAGAATAAGGTTCGTA 57.710 34.615 0.00 0.00 0.00 3.43
553 3116 4.759516 TTTTTCCTACTCACGCAATTCC 57.240 40.909 0.00 0.00 0.00 3.01
580 3143 2.203625 AACAAGTTGGGCCCGCAT 60.204 55.556 19.37 2.13 0.00 4.73
613 3176 2.732468 CGATCGCTGATGGCCTCG 60.732 66.667 3.32 0.00 36.67 4.63
623 3186 2.683465 ATGGCCTCGGCATTGGACT 61.683 57.895 10.51 0.00 46.61 3.85
632 3195 1.387295 GGCATTGGACTAGCAAGCCC 61.387 60.000 0.00 0.00 34.71 5.19
636 3199 0.771127 TTGGACTAGCAAGCCCAACT 59.229 50.000 0.00 0.00 40.02 3.16
656 3219 5.039480 ACTCTCAAAACGAGCATGATTTG 57.961 39.130 0.00 5.07 41.98 2.32
685 3248 2.125350 GCCTCCGTCTCTGCAAGG 60.125 66.667 0.00 0.00 0.00 3.61
728 3291 3.437795 CTTGCTGGCCAAGGCGAG 61.438 66.667 17.38 17.38 45.78 5.03
737 3300 0.099436 GCCAAGGCGAGCAAATACTG 59.901 55.000 0.00 0.00 0.00 2.74
746 3309 2.967740 GCAAATACTGCCAGCATGC 58.032 52.632 10.51 10.51 46.13 4.06
747 3310 0.173935 GCAAATACTGCCAGCATGCA 59.826 50.000 21.98 0.00 46.13 3.96
748 3311 1.917273 CAAATACTGCCAGCATGCAC 58.083 50.000 21.98 9.50 36.04 4.57
749 3312 0.452987 AAATACTGCCAGCATGCACG 59.547 50.000 21.98 10.45 36.04 5.34
750 3313 0.677731 AATACTGCCAGCATGCACGT 60.678 50.000 21.98 11.03 36.04 4.49
751 3314 0.177836 ATACTGCCAGCATGCACGTA 59.822 50.000 21.98 12.81 36.04 3.57
752 3315 0.739462 TACTGCCAGCATGCACGTAC 60.739 55.000 21.98 4.86 36.04 3.67
753 3316 2.745884 TGCCAGCATGCACGTACC 60.746 61.111 21.98 2.24 36.04 3.34
754 3317 3.864686 GCCAGCATGCACGTACCG 61.865 66.667 21.98 0.00 31.97 4.02
755 3318 2.434185 CCAGCATGCACGTACCGT 60.434 61.111 21.98 0.00 42.36 4.83
756 3319 1.153726 CCAGCATGCACGTACCGTA 60.154 57.895 21.98 0.00 38.32 4.02
757 3320 1.418342 CCAGCATGCACGTACCGTAC 61.418 60.000 21.98 0.00 38.32 3.67
798 3361 2.080286 ACTCCTTGTCATGCACGTAC 57.920 50.000 0.00 0.00 0.00 3.67
800 3363 0.315886 TCCTTGTCATGCACGTACGT 59.684 50.000 16.72 16.72 0.00 3.57
801 3364 1.540707 TCCTTGTCATGCACGTACGTA 59.459 47.619 22.34 7.01 0.00 3.57
802 3365 2.164827 TCCTTGTCATGCACGTACGTAT 59.835 45.455 22.34 9.40 0.00 3.06
882 3445 3.447752 TGTACGTCAACAAATCATGCG 57.552 42.857 0.00 0.00 0.00 4.73
894 3457 1.395635 ATCATGCGTGCATCCAATGT 58.604 45.000 3.96 0.00 33.90 2.71
915 3478 5.793817 TGTGAACTGGAGTAGTACGTAGTA 58.206 41.667 6.02 6.02 45.11 1.82
996 3561 1.469251 CGTAGCGGTGCAAGACTACAT 60.469 52.381 16.86 0.00 35.76 2.29
1085 3650 4.511246 CATGGCGGCATCCTGGGT 62.511 66.667 23.19 0.00 0.00 4.51
1097 3662 1.685765 CCTGGGTCGACCTCCATCA 60.686 63.158 32.52 20.47 41.11 3.07
1146 3711 4.003788 CTTGACCCAGGCGACCGT 62.004 66.667 0.00 0.00 0.00 4.83
1251 3817 3.390967 TCTTCCCTGATGGCGAATTCATA 59.609 43.478 6.22 0.00 0.00 2.15
1257 3823 3.130633 TGATGGCGAATTCATAACTCCG 58.869 45.455 6.22 0.00 0.00 4.63
1429 4473 8.028938 ACAACTATGTCTTGCACAATATTTTCC 58.971 33.333 0.00 0.00 38.97 3.13
1500 4544 0.748450 ACCACGTCCTCAAGTTTCGA 59.252 50.000 0.00 0.00 0.00 3.71
1557 4601 1.909302 ACCACCAACGAGAATCATCCT 59.091 47.619 0.00 0.00 33.17 3.24
1620 4670 4.258702 ACCACGAGCAGAACCATATATC 57.741 45.455 0.00 0.00 0.00 1.63
1668 4718 4.507710 GAGACAAACTCTATGGCATCACA 58.492 43.478 1.65 0.00 41.94 3.58
1707 4757 3.283259 CCCTTTGATCTAGGGTTGGAC 57.717 52.381 19.76 0.00 46.16 4.02
1748 4805 0.038166 ACCATTGGAAGGCGTGTGAT 59.962 50.000 10.37 0.00 0.00 3.06
1749 4806 1.176527 CCATTGGAAGGCGTGTGATT 58.823 50.000 0.00 0.00 0.00 2.57
1750 4807 1.133025 CCATTGGAAGGCGTGTGATTC 59.867 52.381 0.00 0.00 0.00 2.52
1751 4808 1.086696 ATTGGAAGGCGTGTGATTCG 58.913 50.000 0.00 0.00 0.00 3.34
1752 4809 0.953471 TTGGAAGGCGTGTGATTCGG 60.953 55.000 0.00 0.00 0.00 4.30
1768 4825 0.604073 TCGGCAACCACTCGATTACA 59.396 50.000 0.00 0.00 0.00 2.41
1770 4827 1.327460 CGGCAACCACTCGATTACATG 59.673 52.381 0.00 0.00 0.00 3.21
1789 4846 3.228188 TGGATTATGATTGGTGGCCTC 57.772 47.619 3.32 0.00 0.00 4.70
1800 4857 1.596934 GTGGCCTCCGTCTGATTCA 59.403 57.895 3.32 0.00 0.00 2.57
1820 4877 6.890979 TTCAGATGACGATGATAGAGACAT 57.109 37.500 0.00 0.00 0.00 3.06
1837 4897 5.068855 AGAGACATTGATGATGATGACGACT 59.931 40.000 0.00 0.00 39.15 4.18
1839 4902 6.212235 AGACATTGATGATGATGACGACTAC 58.788 40.000 0.00 0.00 39.15 2.73
1865 4928 1.541368 TTGTGGGGGAGGAGGAAGG 60.541 63.158 0.00 0.00 0.00 3.46
1915 5023 0.260230 AGAGGAGAAGATGGAGGCGA 59.740 55.000 0.00 0.00 0.00 5.54
1918 5026 1.384989 GGAGAAGATGGAGGCGACGA 61.385 60.000 0.00 0.00 0.00 4.20
1937 5054 1.133025 GATGGATGTGAAAACTGCGGG 59.867 52.381 0.00 0.00 0.00 6.13
1972 5092 3.926527 CGTCGATTTTGATCAAGACTGGA 59.073 43.478 18.17 8.50 0.00 3.86
1990 5110 4.771577 ACTGGACAACAATGGCAAATGATA 59.228 37.500 10.22 0.00 35.69 2.15
2027 5147 8.522830 TGAAAAGGACCACAATTATCTGAATTC 58.477 33.333 0.00 0.00 0.00 2.17
2113 5247 0.943835 CATGGTGAAGACACGCACGA 60.944 55.000 0.00 0.00 46.77 4.35
2166 9121 3.510719 CCAGGTTGATGTTTTTATGGCG 58.489 45.455 0.00 0.00 0.00 5.69
2219 9174 1.668826 AATGGCCTTGGAGGTAGTCA 58.331 50.000 3.32 0.00 37.80 3.41
2221 9176 1.440618 TGGCCTTGGAGGTAGTCAAA 58.559 50.000 3.32 0.00 37.80 2.69
2434 9391 6.363473 GTGCTTTAACGGTATATGAGCATTC 58.637 40.000 10.27 0.00 40.31 2.67
2448 9409 5.843673 TGAGCATTCCACAACAGTTTTAA 57.156 34.783 0.00 0.00 0.00 1.52
2452 9413 7.277539 TGAGCATTCCACAACAGTTTTAAAAAG 59.722 33.333 1.31 1.30 0.00 2.27
2528 9493 5.640357 GGTTGAGTTGTCACGTGGATATTTA 59.360 40.000 17.00 0.00 30.10 1.40
2540 9505 8.240682 TCACGTGGATATTTATTTTCCTTTGTG 58.759 33.333 17.00 0.00 32.69 3.33
2642 9612 5.405935 AAGCTTGGACAATATTTGGTTCC 57.594 39.130 0.00 0.00 34.12 3.62
2643 9613 4.415596 AGCTTGGACAATATTTGGTTCCA 58.584 39.130 2.16 2.16 34.95 3.53
2657 9627 9.874205 ATATTTGGTTCCAACAGTCATAATTTG 57.126 29.630 3.56 0.00 0.00 2.32
2660 9630 5.304101 TGGTTCCAACAGTCATAATTTGCTT 59.696 36.000 0.00 0.00 0.00 3.91
2661 9631 5.634859 GGTTCCAACAGTCATAATTTGCTTG 59.365 40.000 0.00 0.00 0.00 4.01
2662 9632 6.446318 GTTCCAACAGTCATAATTTGCTTGA 58.554 36.000 0.00 0.00 0.00 3.02
2663 9633 6.839124 TCCAACAGTCATAATTTGCTTGAT 57.161 33.333 0.00 0.00 0.00 2.57
2664 9634 7.230849 TCCAACAGTCATAATTTGCTTGATT 57.769 32.000 0.00 0.00 0.00 2.57
2665 9635 7.092079 TCCAACAGTCATAATTTGCTTGATTG 58.908 34.615 0.00 0.00 34.42 2.67
2666 9636 6.869913 CCAACAGTCATAATTTGCTTGATTGT 59.130 34.615 0.00 0.00 40.63 2.71
2667 9637 7.062605 CCAACAGTCATAATTTGCTTGATTGTC 59.937 37.037 1.60 0.00 38.77 3.18
2668 9638 7.218228 ACAGTCATAATTTGCTTGATTGTCA 57.782 32.000 0.00 0.00 36.07 3.58
2669 9639 7.833786 ACAGTCATAATTTGCTTGATTGTCAT 58.166 30.769 0.00 0.00 36.07 3.06
2706 9676 4.437239 GACCTCTGGACTGTATCAATGTG 58.563 47.826 0.00 0.00 0.00 3.21
2727 9697 3.117046 GCTCCATTACTCGTGCTTAGAC 58.883 50.000 0.00 0.00 0.00 2.59
2741 9711 0.255890 TTAGACCCTTGAGCATGGCC 59.744 55.000 0.00 0.00 0.00 5.36
2745 9715 2.703798 CCCTTGAGCATGGCCGTTG 61.704 63.158 0.00 0.00 0.00 4.10
2755 9725 0.182775 ATGGCCGTTGGATAGGTTCC 59.817 55.000 0.00 0.00 45.69 3.62
2825 9795 5.976458 ACTAAAGCTCTTTCCTGAGAGATG 58.024 41.667 6.11 0.00 44.78 2.90
2826 9796 2.985957 AGCTCTTTCCTGAGAGATGC 57.014 50.000 6.11 1.27 44.78 3.91
2845 9815 3.779759 TGCGTTGGATTTATGCCAAATC 58.220 40.909 10.83 10.83 46.18 2.17
2984 9954 9.865321 AAAGTAGCAACGAAGTATATAGTTCAA 57.135 29.630 23.75 5.29 45.00 2.69
2994 9964 9.135843 CGAAGTATATAGTTCAACACAAGTTCA 57.864 33.333 23.75 0.00 35.28 3.18
3091 10061 6.980051 AAAAGGTGAAATATGTCTACGACC 57.020 37.500 0.00 0.00 0.00 4.79
3100 10070 9.173021 TGAAATATGTCTACGACCATTGAATTT 57.827 29.630 0.00 0.00 0.00 1.82
3152 10122 2.031857 GCGATAAGTGAGTACCTCCGAG 60.032 54.545 0.00 0.00 0.00 4.63
3171 10141 2.439883 GACGAGGGGCGACTAGGT 60.440 66.667 0.00 0.00 44.57 3.08
3213 10183 3.065575 GGTGTGAGACCTTATGGCG 57.934 57.895 0.00 0.00 42.25 5.69
3265 10235 6.154363 TGGGGACTAAACCATCAATGATTTTC 59.846 38.462 0.00 0.00 0.00 2.29
3294 10264 4.400529 TGCTCCTATTAGAAATGCGACA 57.599 40.909 0.00 0.00 0.00 4.35
3295 10265 4.765273 TGCTCCTATTAGAAATGCGACAA 58.235 39.130 0.00 0.00 0.00 3.18
3296 10266 4.570772 TGCTCCTATTAGAAATGCGACAAC 59.429 41.667 0.00 0.00 0.00 3.32
3297 10267 4.570772 GCTCCTATTAGAAATGCGACAACA 59.429 41.667 0.00 0.00 0.00 3.33
3298 10268 5.502544 GCTCCTATTAGAAATGCGACAACAC 60.503 44.000 0.00 0.00 0.00 3.32
3299 10269 4.873827 TCCTATTAGAAATGCGACAACACC 59.126 41.667 0.00 0.00 0.00 4.16
3300 10270 4.876107 CCTATTAGAAATGCGACAACACCT 59.124 41.667 0.00 0.00 0.00 4.00
3301 10271 6.046593 CCTATTAGAAATGCGACAACACCTA 58.953 40.000 0.00 0.00 0.00 3.08
3302 10272 6.537301 CCTATTAGAAATGCGACAACACCTAA 59.463 38.462 0.00 0.00 0.00 2.69
3303 10273 7.226720 CCTATTAGAAATGCGACAACACCTAAT 59.773 37.037 0.00 0.00 32.45 1.73
3304 10274 9.256477 CTATTAGAAATGCGACAACACCTAATA 57.744 33.333 0.00 0.00 30.89 0.98
3305 10275 7.534085 TTAGAAATGCGACAACACCTAATAG 57.466 36.000 0.00 0.00 0.00 1.73
3306 10276 5.730550 AGAAATGCGACAACACCTAATAGA 58.269 37.500 0.00 0.00 0.00 1.98
3307 10277 6.170506 AGAAATGCGACAACACCTAATAGAA 58.829 36.000 0.00 0.00 0.00 2.10
3308 10278 6.823689 AGAAATGCGACAACACCTAATAGAAT 59.176 34.615 0.00 0.00 0.00 2.40
3309 10279 6.604735 AATGCGACAACACCTAATAGAATC 57.395 37.500 0.00 0.00 0.00 2.52
3310 10280 5.079689 TGCGACAACACCTAATAGAATCA 57.920 39.130 0.00 0.00 0.00 2.57
3311 10281 5.483811 TGCGACAACACCTAATAGAATCAA 58.516 37.500 0.00 0.00 0.00 2.57
3312 10282 5.350365 TGCGACAACACCTAATAGAATCAAC 59.650 40.000 0.00 0.00 0.00 3.18
3313 10283 5.581085 GCGACAACACCTAATAGAATCAACT 59.419 40.000 0.00 0.00 0.00 3.16
3314 10284 6.092259 GCGACAACACCTAATAGAATCAACTT 59.908 38.462 0.00 0.00 0.00 2.66
3315 10285 7.674240 GCGACAACACCTAATAGAATCAACTTC 60.674 40.741 0.00 0.00 0.00 3.01
3316 10286 7.330946 CGACAACACCTAATAGAATCAACTTCA 59.669 37.037 0.00 0.00 36.24 3.02
3317 10287 8.553459 ACAACACCTAATAGAATCAACTTCAG 57.447 34.615 0.00 0.00 36.24 3.02
3318 10288 8.375506 ACAACACCTAATAGAATCAACTTCAGA 58.624 33.333 0.00 0.00 36.24 3.27
3319 10289 9.219603 CAACACCTAATAGAATCAACTTCAGAA 57.780 33.333 0.00 0.00 36.24 3.02
3320 10290 9.442047 AACACCTAATAGAATCAACTTCAGAAG 57.558 33.333 8.77 8.77 36.24 2.85
3321 10291 7.550906 ACACCTAATAGAATCAACTTCAGAAGC 59.449 37.037 10.33 0.00 36.24 3.86
3322 10292 7.550551 CACCTAATAGAATCAACTTCAGAAGCA 59.449 37.037 10.33 0.00 36.24 3.91
3323 10293 7.768120 ACCTAATAGAATCAACTTCAGAAGCAG 59.232 37.037 10.33 3.21 36.24 4.24
3324 10294 7.768120 CCTAATAGAATCAACTTCAGAAGCAGT 59.232 37.037 10.33 0.00 36.24 4.40
3325 10295 7.992754 AATAGAATCAACTTCAGAAGCAGTT 57.007 32.000 10.33 0.67 36.24 3.16
3326 10296 7.992754 ATAGAATCAACTTCAGAAGCAGTTT 57.007 32.000 10.33 4.57 36.24 2.66
3327 10297 6.069684 AGAATCAACTTCAGAAGCAGTTTG 57.930 37.500 10.33 7.40 36.24 2.93
3328 10298 5.591877 AGAATCAACTTCAGAAGCAGTTTGT 59.408 36.000 10.33 1.01 36.24 2.83
3329 10299 5.841957 ATCAACTTCAGAAGCAGTTTGTT 57.158 34.783 10.33 0.33 28.44 2.83
3330 10300 5.235305 TCAACTTCAGAAGCAGTTTGTTC 57.765 39.130 10.33 0.00 28.44 3.18
3331 10301 4.943705 TCAACTTCAGAAGCAGTTTGTTCT 59.056 37.500 10.33 0.00 28.44 3.01
3332 10302 5.065218 TCAACTTCAGAAGCAGTTTGTTCTC 59.935 40.000 10.33 0.00 28.44 2.87
3333 10303 3.879892 ACTTCAGAAGCAGTTTGTTCTCC 59.120 43.478 10.33 0.00 30.31 3.71
3334 10304 3.845781 TCAGAAGCAGTTTGTTCTCCT 57.154 42.857 0.00 0.00 30.31 3.69
3335 10305 4.156455 TCAGAAGCAGTTTGTTCTCCTT 57.844 40.909 0.00 0.00 30.31 3.36
3336 10306 4.526970 TCAGAAGCAGTTTGTTCTCCTTT 58.473 39.130 0.00 0.00 30.31 3.11
3337 10307 5.680619 TCAGAAGCAGTTTGTTCTCCTTTA 58.319 37.500 0.00 0.00 30.31 1.85
3338 10308 5.527582 TCAGAAGCAGTTTGTTCTCCTTTAC 59.472 40.000 0.00 0.00 30.31 2.01
3339 10309 5.529060 CAGAAGCAGTTTGTTCTCCTTTACT 59.471 40.000 0.00 0.00 30.31 2.24
3340 10310 5.529060 AGAAGCAGTTTGTTCTCCTTTACTG 59.471 40.000 0.00 0.00 36.85 2.74
3341 10311 4.137543 AGCAGTTTGTTCTCCTTTACTGG 58.862 43.478 0.00 0.00 34.92 4.00
3342 10312 3.253432 GCAGTTTGTTCTCCTTTACTGGG 59.747 47.826 0.00 0.00 34.92 4.45
3343 10313 3.821033 CAGTTTGTTCTCCTTTACTGGGG 59.179 47.826 0.00 0.00 31.69 4.96
3344 10314 3.720002 AGTTTGTTCTCCTTTACTGGGGA 59.280 43.478 0.00 0.00 34.20 4.81
3345 10315 3.782656 TTGTTCTCCTTTACTGGGGAC 57.217 47.619 0.00 0.00 36.11 4.46
3346 10316 2.986050 TGTTCTCCTTTACTGGGGACT 58.014 47.619 0.00 0.00 36.11 3.85
3347 10317 4.136341 TGTTCTCCTTTACTGGGGACTA 57.864 45.455 0.00 0.00 36.11 2.59
3348 10318 4.495565 TGTTCTCCTTTACTGGGGACTAA 58.504 43.478 0.00 0.00 36.11 2.24
3349 10319 4.909088 TGTTCTCCTTTACTGGGGACTAAA 59.091 41.667 0.00 0.00 36.11 1.85
3350 10320 5.221783 TGTTCTCCTTTACTGGGGACTAAAC 60.222 44.000 0.00 0.00 36.11 2.01
3351 10321 3.842436 TCTCCTTTACTGGGGACTAAACC 59.158 47.826 0.00 0.00 30.32 3.27
3352 10322 3.585732 CTCCTTTACTGGGGACTAAACCA 59.414 47.826 0.00 0.00 35.05 3.67
3353 10323 4.180723 TCCTTTACTGGGGACTAAACCAT 58.819 43.478 0.00 0.00 35.93 3.55
3354 10324 4.226620 TCCTTTACTGGGGACTAAACCATC 59.773 45.833 0.00 0.00 35.93 3.51
3355 10325 3.899052 TTACTGGGGACTAAACCATCG 57.101 47.619 0.00 0.00 35.93 3.84
3356 10326 0.909623 ACTGGGGACTAAACCATCGG 59.090 55.000 0.00 0.00 35.93 4.18
3357 10327 0.909623 CTGGGGACTAAACCATCGGT 59.090 55.000 0.00 0.00 37.65 4.69
3358 10328 0.616371 TGGGGACTAAACCATCGGTG 59.384 55.000 0.00 0.00 35.34 4.94
3359 10329 0.906775 GGGGACTAAACCATCGGTGA 59.093 55.000 0.00 0.00 35.34 4.02
3360 10330 1.489230 GGGGACTAAACCATCGGTGAT 59.511 52.381 0.00 0.00 35.34 3.06
3361 10331 2.092592 GGGGACTAAACCATCGGTGATT 60.093 50.000 0.00 0.00 35.34 2.57
3362 10332 3.617284 GGGACTAAACCATCGGTGATTT 58.383 45.455 0.00 0.00 35.34 2.17
3363 10333 4.014406 GGGACTAAACCATCGGTGATTTT 58.986 43.478 0.00 0.00 35.34 1.82
3364 10334 4.142469 GGGACTAAACCATCGGTGATTTTG 60.142 45.833 0.00 0.00 35.34 2.44
3365 10335 4.457949 GGACTAAACCATCGGTGATTTTGT 59.542 41.667 2.00 2.00 35.34 2.83
3366 10336 5.644636 GGACTAAACCATCGGTGATTTTGTA 59.355 40.000 2.41 0.00 35.34 2.41
3367 10337 6.149807 GGACTAAACCATCGGTGATTTTGTAA 59.850 38.462 2.41 0.00 35.34 2.41
3368 10338 7.308710 GGACTAAACCATCGGTGATTTTGTAAA 60.309 37.037 2.41 0.00 35.34 2.01
3369 10339 8.117813 ACTAAACCATCGGTGATTTTGTAAAT 57.882 30.769 0.35 0.00 35.34 1.40
3370 10340 8.581578 ACTAAACCATCGGTGATTTTGTAAATT 58.418 29.630 0.35 0.00 35.34 1.82
3371 10341 9.418045 CTAAACCATCGGTGATTTTGTAAATTT 57.582 29.630 0.00 0.00 35.34 1.82
3372 10342 8.669946 AAACCATCGGTGATTTTGTAAATTTT 57.330 26.923 0.00 0.00 35.34 1.82
3373 10343 8.669946 AACCATCGGTGATTTTGTAAATTTTT 57.330 26.923 0.00 0.00 35.34 1.94
3374 10344 8.082334 ACCATCGGTGATTTTGTAAATTTTTG 57.918 30.769 0.00 0.00 32.98 2.44
3375 10345 7.014702 CCATCGGTGATTTTGTAAATTTTTGC 58.985 34.615 0.00 0.00 0.00 3.68
3376 10346 7.095271 CCATCGGTGATTTTGTAAATTTTTGCT 60.095 33.333 0.00 0.00 0.00 3.91
3377 10347 7.401484 TCGGTGATTTTGTAAATTTTTGCTC 57.599 32.000 0.00 0.00 0.00 4.26
3378 10348 6.980978 TCGGTGATTTTGTAAATTTTTGCTCA 59.019 30.769 0.00 0.00 0.00 4.26
3379 10349 7.655328 TCGGTGATTTTGTAAATTTTTGCTCAT 59.345 29.630 0.00 0.00 0.00 2.90
3380 10350 8.920665 CGGTGATTTTGTAAATTTTTGCTCATA 58.079 29.630 0.00 0.00 0.00 2.15
3424 10394 7.768120 CCTAATAGAATCAACTTCAGAAGCTGT 59.232 37.037 10.33 0.00 36.24 4.40
3426 10396 7.992754 ATAGAATCAACTTCAGAAGCTGTTT 57.007 32.000 10.33 9.49 36.24 2.83
3433 10403 3.879892 ACTTCAGAAGCTGTTTGTTCTCC 59.120 43.478 10.33 0.00 30.31 3.71
3436 10406 4.526970 TCAGAAGCTGTTTGTTCTCCTTT 58.473 39.130 0.00 0.00 30.31 3.11
3456 10426 6.051717 CCTTTACTTCTTCGATCCATGTCAT 58.948 40.000 0.00 0.00 0.00 3.06
3462 10432 2.416680 TCGATCCATGTCATTGCCAA 57.583 45.000 0.00 0.00 0.00 4.52
3475 10445 3.255395 TCATTGCCAACATCAACGTGAAT 59.745 39.130 0.00 0.00 0.00 2.57
3482 10452 5.090757 CCAACATCAACGTGAATTCATGAG 58.909 41.667 29.89 21.38 36.72 2.90
3484 10454 5.536554 ACATCAACGTGAATTCATGAGAC 57.463 39.130 29.89 8.60 36.72 3.36
3487 10457 5.596268 TCAACGTGAATTCATGAGACAAG 57.404 39.130 29.89 14.13 36.72 3.16
3489 10459 2.744202 ACGTGAATTCATGAGACAAGGC 59.256 45.455 29.89 5.14 36.72 4.35
3494 10464 5.357878 GTGAATTCATGAGACAAGGCCATAA 59.642 40.000 12.12 0.00 0.00 1.90
3502 10472 0.625849 ACAAGGCCATAAGGAGTGGG 59.374 55.000 5.01 0.00 37.22 4.61
3520 10490 0.586802 GGCCTTGTCGTGTGACTTTC 59.413 55.000 0.00 0.00 45.70 2.62
3549 10519 4.100963 TGCTCAGGTTGTTATCGGATATGT 59.899 41.667 0.00 0.00 0.00 2.29
3554 10524 7.602753 TCAGGTTGTTATCGGATATGTCATAG 58.397 38.462 0.00 0.00 0.00 2.23
3556 10526 7.542477 CAGGTTGTTATCGGATATGTCATAGTC 59.458 40.741 0.00 0.00 0.00 2.59
3580 10550 2.022527 AGGGTAGAGGAGGAAGCAGATT 60.023 50.000 0.00 0.00 0.00 2.40
3585 10555 2.433970 AGAGGAGGAAGCAGATTGTAGC 59.566 50.000 0.00 0.00 0.00 3.58
3597 10567 2.091775 AGATTGTAGCGGAGTAGGGAGT 60.092 50.000 0.00 0.00 0.00 3.85
3622 10592 3.320879 ATGTGGCAGTGGAGGCGAG 62.321 63.158 0.00 0.00 36.77 5.03
3623 10593 4.008933 GTGGCAGTGGAGGCGAGT 62.009 66.667 0.00 0.00 36.77 4.18
3626 10596 4.767255 GCAGTGGAGGCGAGTGGG 62.767 72.222 0.00 0.00 0.00 4.61
3629 10599 2.266055 GTGGAGGCGAGTGGGAAG 59.734 66.667 0.00 0.00 0.00 3.46
3630 10600 3.003173 TGGAGGCGAGTGGGAAGG 61.003 66.667 0.00 0.00 0.00 3.46
3631 10601 2.683933 GGAGGCGAGTGGGAAGGA 60.684 66.667 0.00 0.00 0.00 3.36
3632 10602 2.726351 GGAGGCGAGTGGGAAGGAG 61.726 68.421 0.00 0.00 0.00 3.69
3633 10603 1.682684 GAGGCGAGTGGGAAGGAGA 60.683 63.158 0.00 0.00 0.00 3.71
3634 10604 1.229209 AGGCGAGTGGGAAGGAGAA 60.229 57.895 0.00 0.00 0.00 2.87
3635 10605 1.219393 GGCGAGTGGGAAGGAGAAG 59.781 63.158 0.00 0.00 0.00 2.85
3636 10606 1.258445 GGCGAGTGGGAAGGAGAAGA 61.258 60.000 0.00 0.00 0.00 2.87
3637 10607 0.608640 GCGAGTGGGAAGGAGAAGAA 59.391 55.000 0.00 0.00 0.00 2.52
3638 10608 1.404851 GCGAGTGGGAAGGAGAAGAAG 60.405 57.143 0.00 0.00 0.00 2.85
3639 10609 1.404851 CGAGTGGGAAGGAGAAGAAGC 60.405 57.143 0.00 0.00 0.00 3.86
3640 10610 0.610687 AGTGGGAAGGAGAAGAAGCG 59.389 55.000 0.00 0.00 0.00 4.68
3641 10611 0.608640 GTGGGAAGGAGAAGAAGCGA 59.391 55.000 0.00 0.00 0.00 4.93
3642 10612 0.898320 TGGGAAGGAGAAGAAGCGAG 59.102 55.000 0.00 0.00 0.00 5.03
3643 10613 0.176910 GGGAAGGAGAAGAAGCGAGG 59.823 60.000 0.00 0.00 0.00 4.63
3644 10614 0.176910 GGAAGGAGAAGAAGCGAGGG 59.823 60.000 0.00 0.00 0.00 4.30
3645 10615 0.899019 GAAGGAGAAGAAGCGAGGGT 59.101 55.000 0.00 0.00 0.00 4.34
3646 10616 0.610687 AAGGAGAAGAAGCGAGGGTG 59.389 55.000 0.00 0.00 0.00 4.61
3647 10617 1.219393 GGAGAAGAAGCGAGGGTGG 59.781 63.158 0.00 0.00 0.00 4.61
3648 10618 1.219393 GAGAAGAAGCGAGGGTGGG 59.781 63.158 0.00 0.00 0.00 4.61
3649 10619 1.229209 AGAAGAAGCGAGGGTGGGA 60.229 57.895 0.00 0.00 0.00 4.37
3650 10620 1.219393 GAAGAAGCGAGGGTGGGAG 59.781 63.158 0.00 0.00 0.00 4.30
3651 10621 1.229209 AAGAAGCGAGGGTGGGAGA 60.229 57.895 0.00 0.00 0.00 3.71
3652 10622 0.836400 AAGAAGCGAGGGTGGGAGAA 60.836 55.000 0.00 0.00 0.00 2.87
3653 10623 0.618968 AGAAGCGAGGGTGGGAGAAT 60.619 55.000 0.00 0.00 0.00 2.40
3654 10624 1.120530 GAAGCGAGGGTGGGAGAATA 58.879 55.000 0.00 0.00 0.00 1.75
3655 10625 1.069358 GAAGCGAGGGTGGGAGAATAG 59.931 57.143 0.00 0.00 0.00 1.73
3656 10626 0.760945 AGCGAGGGTGGGAGAATAGG 60.761 60.000 0.00 0.00 0.00 2.57
3657 10627 1.749033 CGAGGGTGGGAGAATAGGC 59.251 63.158 0.00 0.00 0.00 3.93
3658 10628 1.749033 GAGGGTGGGAGAATAGGCG 59.251 63.158 0.00 0.00 0.00 5.52
3659 10629 0.759436 GAGGGTGGGAGAATAGGCGA 60.759 60.000 0.00 0.00 0.00 5.54
3660 10630 0.326238 AGGGTGGGAGAATAGGCGAA 60.326 55.000 0.00 0.00 0.00 4.70
3661 10631 0.106894 GGGTGGGAGAATAGGCGAAG 59.893 60.000 0.00 0.00 0.00 3.79
3662 10632 0.106894 GGTGGGAGAATAGGCGAAGG 59.893 60.000 0.00 0.00 0.00 3.46
3663 10633 0.106894 GTGGGAGAATAGGCGAAGGG 59.893 60.000 0.00 0.00 0.00 3.95
3664 10634 1.054406 TGGGAGAATAGGCGAAGGGG 61.054 60.000 0.00 0.00 0.00 4.79
3665 10635 0.763223 GGGAGAATAGGCGAAGGGGA 60.763 60.000 0.00 0.00 0.00 4.81
3666 10636 1.129058 GGAGAATAGGCGAAGGGGAA 58.871 55.000 0.00 0.00 0.00 3.97
3667 10637 1.202663 GGAGAATAGGCGAAGGGGAAC 60.203 57.143 0.00 0.00 0.00 3.62
3668 10638 1.485066 GAGAATAGGCGAAGGGGAACA 59.515 52.381 0.00 0.00 0.00 3.18
3669 10639 2.104963 GAGAATAGGCGAAGGGGAACAT 59.895 50.000 0.00 0.00 0.00 2.71
3670 10640 2.158755 AGAATAGGCGAAGGGGAACATG 60.159 50.000 0.00 0.00 0.00 3.21
3671 10641 1.507140 ATAGGCGAAGGGGAACATGA 58.493 50.000 0.00 0.00 0.00 3.07
3672 10642 1.281419 TAGGCGAAGGGGAACATGAA 58.719 50.000 0.00 0.00 0.00 2.57
3673 10643 0.035056 AGGCGAAGGGGAACATGAAG 60.035 55.000 0.00 0.00 0.00 3.02
3674 10644 1.657751 GGCGAAGGGGAACATGAAGC 61.658 60.000 0.00 0.00 0.00 3.86
3675 10645 1.982073 GCGAAGGGGAACATGAAGCG 61.982 60.000 0.00 0.00 0.00 4.68
3676 10646 0.673644 CGAAGGGGAACATGAAGCGT 60.674 55.000 0.00 0.00 0.00 5.07
3677 10647 1.404986 CGAAGGGGAACATGAAGCGTA 60.405 52.381 0.00 0.00 0.00 4.42
3678 10648 2.706890 GAAGGGGAACATGAAGCGTAA 58.293 47.619 0.00 0.00 0.00 3.18
3679 10649 2.109425 AGGGGAACATGAAGCGTAAC 57.891 50.000 0.00 0.00 0.00 2.50
3680 10650 1.349688 AGGGGAACATGAAGCGTAACA 59.650 47.619 0.00 0.00 0.00 2.41
3681 10651 2.156098 GGGGAACATGAAGCGTAACAA 58.844 47.619 0.00 0.00 0.00 2.83
3682 10652 2.095415 GGGGAACATGAAGCGTAACAAC 60.095 50.000 0.00 0.00 0.00 3.32
3683 10653 2.812011 GGGAACATGAAGCGTAACAACT 59.188 45.455 0.00 0.00 0.00 3.16
3684 10654 3.252458 GGGAACATGAAGCGTAACAACTT 59.748 43.478 0.00 0.00 0.00 2.66
3685 10655 4.219033 GGAACATGAAGCGTAACAACTTG 58.781 43.478 0.00 0.00 0.00 3.16
3686 10656 4.024387 GGAACATGAAGCGTAACAACTTGA 60.024 41.667 0.00 0.00 0.00 3.02
3687 10657 4.732285 ACATGAAGCGTAACAACTTGAG 57.268 40.909 0.00 0.00 0.00 3.02
3688 10658 3.498397 ACATGAAGCGTAACAACTTGAGG 59.502 43.478 0.00 0.00 0.00 3.86
3689 10659 3.188159 TGAAGCGTAACAACTTGAGGT 57.812 42.857 0.00 0.00 0.00 3.85
3690 10660 3.537580 TGAAGCGTAACAACTTGAGGTT 58.462 40.909 0.00 0.00 38.93 3.50
3700 10670 2.841442 ACTTGAGGTTGGCTGTAGAC 57.159 50.000 0.00 0.00 0.00 2.59
3701 10671 2.047061 ACTTGAGGTTGGCTGTAGACA 58.953 47.619 0.00 0.00 0.00 3.41
3702 10672 2.438021 ACTTGAGGTTGGCTGTAGACAA 59.562 45.455 0.00 0.00 41.52 3.18
3703 10673 2.839486 TGAGGTTGGCTGTAGACAAG 57.161 50.000 0.00 0.00 44.94 3.16
3707 10677 2.169832 GTTGGCTGTAGACAAGCTGA 57.830 50.000 0.00 0.00 44.94 4.26
3708 10678 1.801178 GTTGGCTGTAGACAAGCTGAC 59.199 52.381 0.00 0.00 44.94 3.51
3709 10679 0.321671 TGGCTGTAGACAAGCTGACC 59.678 55.000 0.00 0.00 0.00 4.02
3710 10680 0.321671 GGCTGTAGACAAGCTGACCA 59.678 55.000 0.00 0.00 0.00 4.02
3711 10681 1.433534 GCTGTAGACAAGCTGACCAC 58.566 55.000 0.00 0.00 0.00 4.16
3712 10682 1.941668 GCTGTAGACAAGCTGACCACC 60.942 57.143 0.00 0.00 0.00 4.61
3713 10683 1.620819 CTGTAGACAAGCTGACCACCT 59.379 52.381 0.00 0.00 0.00 4.00
3714 10684 2.826128 CTGTAGACAAGCTGACCACCTA 59.174 50.000 0.00 0.00 0.00 3.08
3715 10685 2.826128 TGTAGACAAGCTGACCACCTAG 59.174 50.000 0.00 0.00 0.00 3.02
3716 10686 0.610687 AGACAAGCTGACCACCTAGC 59.389 55.000 0.00 0.00 40.18 3.42
3721 10691 3.371087 GCTGACCACCTAGCTAAGC 57.629 57.895 0.00 0.00 36.99 3.09
3722 10692 0.537188 GCTGACCACCTAGCTAAGCA 59.463 55.000 6.48 0.00 36.99 3.91
3723 10693 1.139853 GCTGACCACCTAGCTAAGCAT 59.860 52.381 6.48 0.00 36.99 3.79
3724 10694 2.831333 CTGACCACCTAGCTAAGCATG 58.169 52.381 0.00 0.00 0.00 4.06
3725 10695 2.432146 CTGACCACCTAGCTAAGCATGA 59.568 50.000 0.00 0.00 0.00 3.07
3726 10696 2.168521 TGACCACCTAGCTAAGCATGAC 59.831 50.000 0.00 0.00 0.00 3.06
3727 10697 2.168521 GACCACCTAGCTAAGCATGACA 59.831 50.000 0.00 0.00 0.00 3.58
3728 10698 2.774234 ACCACCTAGCTAAGCATGACAT 59.226 45.455 0.00 0.00 0.00 3.06
3729 10699 3.200825 ACCACCTAGCTAAGCATGACATT 59.799 43.478 0.00 0.00 0.00 2.71
3730 10700 3.562973 CCACCTAGCTAAGCATGACATTG 59.437 47.826 0.00 0.00 0.00 2.82
3731 10701 4.194640 CACCTAGCTAAGCATGACATTGT 58.805 43.478 0.00 0.00 0.00 2.71
3732 10702 4.034858 CACCTAGCTAAGCATGACATTGTG 59.965 45.833 0.00 0.00 0.00 3.33
3733 10703 3.562973 CCTAGCTAAGCATGACATTGTGG 59.437 47.826 0.00 0.00 0.00 4.17
3734 10704 3.354948 AGCTAAGCATGACATTGTGGA 57.645 42.857 0.00 0.00 0.00 4.02
3735 10705 3.276857 AGCTAAGCATGACATTGTGGAG 58.723 45.455 0.00 0.00 0.00 3.86
3736 10706 2.357009 GCTAAGCATGACATTGTGGAGG 59.643 50.000 0.00 0.00 0.00 4.30
3737 10707 2.592102 AAGCATGACATTGTGGAGGT 57.408 45.000 0.00 0.00 0.00 3.85
3738 10708 1.830279 AGCATGACATTGTGGAGGTG 58.170 50.000 0.00 0.00 0.00 4.00
3739 10709 1.074405 AGCATGACATTGTGGAGGTGT 59.926 47.619 0.00 0.00 0.00 4.16
3740 10710 1.470098 GCATGACATTGTGGAGGTGTC 59.530 52.381 0.00 0.00 41.90 3.67
3743 10713 2.849942 TGACATTGTGGAGGTGTCAAG 58.150 47.619 5.07 0.00 46.45 3.02
3744 10714 2.154462 GACATTGTGGAGGTGTCAAGG 58.846 52.381 0.00 0.00 41.35 3.61
3745 10715 0.883833 CATTGTGGAGGTGTCAAGGC 59.116 55.000 0.00 0.00 0.00 4.35
3746 10716 0.478072 ATTGTGGAGGTGTCAAGGCA 59.522 50.000 0.00 0.00 0.00 4.75
3747 10717 0.257328 TTGTGGAGGTGTCAAGGCAA 59.743 50.000 0.00 0.00 0.00 4.52
3748 10718 0.257328 TGTGGAGGTGTCAAGGCAAA 59.743 50.000 0.00 0.00 0.00 3.68
3749 10719 0.954452 GTGGAGGTGTCAAGGCAAAG 59.046 55.000 0.00 0.00 0.00 2.77
3750 10720 0.823356 TGGAGGTGTCAAGGCAAAGC 60.823 55.000 0.00 0.00 0.00 3.51
3751 10721 1.576421 GAGGTGTCAAGGCAAAGCG 59.424 57.895 0.00 0.00 0.00 4.68
3752 10722 2.050077 GGTGTCAAGGCAAAGCGC 60.050 61.111 0.00 0.00 41.28 5.92
3753 10723 2.555547 GGTGTCAAGGCAAAGCGCT 61.556 57.895 2.64 2.64 41.91 5.92
3754 10724 1.370900 GTGTCAAGGCAAAGCGCTG 60.371 57.895 12.58 0.00 41.91 5.18
3755 10725 1.525765 TGTCAAGGCAAAGCGCTGA 60.526 52.632 12.58 0.00 41.91 4.26
3756 10726 1.208614 GTCAAGGCAAAGCGCTGAG 59.791 57.895 12.58 8.02 41.91 3.35
3757 10727 1.227943 TCAAGGCAAAGCGCTGAGT 60.228 52.632 12.58 0.00 41.91 3.41
3758 10728 0.034756 TCAAGGCAAAGCGCTGAGTA 59.965 50.000 12.58 0.00 41.91 2.59
3759 10729 0.445436 CAAGGCAAAGCGCTGAGTAG 59.555 55.000 12.58 0.00 41.91 2.57
3760 10730 0.321671 AAGGCAAAGCGCTGAGTAGA 59.678 50.000 12.58 0.00 41.91 2.59
3761 10731 0.539051 AGGCAAAGCGCTGAGTAGAT 59.461 50.000 12.58 0.00 41.91 1.98
3762 10732 1.757118 AGGCAAAGCGCTGAGTAGATA 59.243 47.619 12.58 0.00 41.91 1.98
3763 10733 2.131183 GGCAAAGCGCTGAGTAGATAG 58.869 52.381 12.58 0.00 41.91 2.08
3764 10734 2.131183 GCAAAGCGCTGAGTAGATAGG 58.869 52.381 12.58 0.00 37.77 2.57
3765 10735 2.223829 GCAAAGCGCTGAGTAGATAGGA 60.224 50.000 12.58 0.00 37.77 2.94
3766 10736 3.738281 GCAAAGCGCTGAGTAGATAGGAA 60.738 47.826 12.58 0.00 37.77 3.36
3767 10737 4.433615 CAAAGCGCTGAGTAGATAGGAAA 58.566 43.478 12.58 0.00 0.00 3.13
3768 10738 4.314740 AAGCGCTGAGTAGATAGGAAAG 57.685 45.455 12.58 0.00 0.00 2.62
3769 10739 3.556999 AGCGCTGAGTAGATAGGAAAGA 58.443 45.455 10.39 0.00 0.00 2.52
3770 10740 4.148838 AGCGCTGAGTAGATAGGAAAGAT 58.851 43.478 10.39 0.00 0.00 2.40
3771 10741 4.586841 AGCGCTGAGTAGATAGGAAAGATT 59.413 41.667 10.39 0.00 0.00 2.40
3772 10742 5.069781 AGCGCTGAGTAGATAGGAAAGATTT 59.930 40.000 10.39 0.00 0.00 2.17
3773 10743 5.176590 GCGCTGAGTAGATAGGAAAGATTTG 59.823 44.000 0.00 0.00 0.00 2.32
3774 10744 6.507900 CGCTGAGTAGATAGGAAAGATTTGA 58.492 40.000 0.00 0.00 0.00 2.69
3775 10745 7.151308 CGCTGAGTAGATAGGAAAGATTTGAT 58.849 38.462 0.00 0.00 0.00 2.57
3776 10746 7.116090 CGCTGAGTAGATAGGAAAGATTTGATG 59.884 40.741 0.00 0.00 0.00 3.07
3777 10747 7.387397 GCTGAGTAGATAGGAAAGATTTGATGG 59.613 40.741 0.00 0.00 0.00 3.51
3778 10748 8.553085 TGAGTAGATAGGAAAGATTTGATGGA 57.447 34.615 0.00 0.00 0.00 3.41
3779 10749 9.163894 TGAGTAGATAGGAAAGATTTGATGGAT 57.836 33.333 0.00 0.00 0.00 3.41
3780 10750 9.651913 GAGTAGATAGGAAAGATTTGATGGATC 57.348 37.037 0.00 0.00 0.00 3.36
3781 10751 9.163894 AGTAGATAGGAAAGATTTGATGGATCA 57.836 33.333 0.00 0.00 34.44 2.92
3782 10752 9.434420 GTAGATAGGAAAGATTTGATGGATCAG 57.566 37.037 0.00 0.00 38.19 2.90
3783 10753 8.043429 AGATAGGAAAGATTTGATGGATCAGT 57.957 34.615 0.00 0.00 38.19 3.41
3784 10754 7.937942 AGATAGGAAAGATTTGATGGATCAGTG 59.062 37.037 0.00 0.00 38.19 3.66
3785 10755 6.070951 AGGAAAGATTTGATGGATCAGTGA 57.929 37.500 0.00 0.00 38.19 3.41
3786 10756 6.120905 AGGAAAGATTTGATGGATCAGTGAG 58.879 40.000 0.00 0.00 38.19 3.51
3787 10757 5.884792 GGAAAGATTTGATGGATCAGTGAGT 59.115 40.000 0.00 0.00 38.19 3.41
3788 10758 7.050377 GGAAAGATTTGATGGATCAGTGAGTA 58.950 38.462 0.00 0.00 38.19 2.59
3789 10759 7.226325 GGAAAGATTTGATGGATCAGTGAGTAG 59.774 40.741 0.00 0.00 38.19 2.57
3790 10760 6.172136 AGATTTGATGGATCAGTGAGTAGG 57.828 41.667 0.00 0.00 38.19 3.18
3791 10761 5.664908 AGATTTGATGGATCAGTGAGTAGGT 59.335 40.000 0.00 0.00 38.19 3.08
3792 10762 6.841229 AGATTTGATGGATCAGTGAGTAGGTA 59.159 38.462 0.00 0.00 38.19 3.08
3793 10763 7.512058 AGATTTGATGGATCAGTGAGTAGGTAT 59.488 37.037 0.00 0.00 38.19 2.73
3794 10764 6.656632 TTGATGGATCAGTGAGTAGGTATC 57.343 41.667 0.00 0.00 38.19 2.24
3795 10765 5.958321 TGATGGATCAGTGAGTAGGTATCT 58.042 41.667 0.00 0.00 32.11 1.98
3796 10766 7.091533 TGATGGATCAGTGAGTAGGTATCTA 57.908 40.000 0.00 0.00 32.11 1.98
3797 10767 7.171653 TGATGGATCAGTGAGTAGGTATCTAG 58.828 42.308 0.00 0.00 32.11 2.43
3798 10768 6.517013 TGGATCAGTGAGTAGGTATCTAGT 57.483 41.667 0.00 0.00 32.13 2.57
3799 10769 6.299922 TGGATCAGTGAGTAGGTATCTAGTG 58.700 44.000 0.00 0.00 29.75 2.74
3800 10770 6.101296 TGGATCAGTGAGTAGGTATCTAGTGA 59.899 42.308 0.00 0.00 29.75 3.41
3801 10771 6.999272 GGATCAGTGAGTAGGTATCTAGTGAA 59.001 42.308 0.00 0.00 29.75 3.18
3802 10772 7.668052 GGATCAGTGAGTAGGTATCTAGTGAAT 59.332 40.741 0.00 0.00 29.75 2.57
3803 10773 7.809546 TCAGTGAGTAGGTATCTAGTGAATG 57.190 40.000 0.00 0.00 32.20 2.67
3804 10774 7.347252 TCAGTGAGTAGGTATCTAGTGAATGT 58.653 38.462 4.96 0.00 32.59 2.71
3805 10775 7.283354 TCAGTGAGTAGGTATCTAGTGAATGTG 59.717 40.741 4.96 0.00 32.59 3.21
3806 10776 6.547880 AGTGAGTAGGTATCTAGTGAATGTGG 59.452 42.308 0.00 0.00 29.75 4.17
3807 10777 6.546403 GTGAGTAGGTATCTAGTGAATGTGGA 59.454 42.308 0.00 0.00 29.75 4.02
3808 10778 6.546403 TGAGTAGGTATCTAGTGAATGTGGAC 59.454 42.308 0.00 0.00 29.75 4.02
3809 10779 6.674573 AGTAGGTATCTAGTGAATGTGGACT 58.325 40.000 0.00 0.00 0.00 3.85
3810 10780 7.126733 AGTAGGTATCTAGTGAATGTGGACTT 58.873 38.462 0.00 0.00 0.00 3.01
3811 10781 6.875972 AGGTATCTAGTGAATGTGGACTTT 57.124 37.500 0.00 0.00 0.00 2.66
3812 10782 7.259088 AGGTATCTAGTGAATGTGGACTTTT 57.741 36.000 0.00 0.00 0.00 2.27
3813 10783 7.331791 AGGTATCTAGTGAATGTGGACTTTTC 58.668 38.462 0.00 0.00 0.00 2.29
3814 10784 6.255887 GGTATCTAGTGAATGTGGACTTTTCG 59.744 42.308 0.00 0.00 0.00 3.46
3815 10785 5.209818 TCTAGTGAATGTGGACTTTTCGT 57.790 39.130 0.00 0.00 0.00 3.85
3816 10786 4.988540 TCTAGTGAATGTGGACTTTTCGTG 59.011 41.667 0.00 0.00 0.00 4.35
3817 10787 3.804036 AGTGAATGTGGACTTTTCGTGA 58.196 40.909 0.00 0.00 0.00 4.35
3818 10788 3.560068 AGTGAATGTGGACTTTTCGTGAC 59.440 43.478 0.00 0.00 0.00 3.67
3819 10789 3.311322 GTGAATGTGGACTTTTCGTGACA 59.689 43.478 0.00 0.00 0.00 3.58
3820 10790 3.559655 TGAATGTGGACTTTTCGTGACAG 59.440 43.478 0.00 0.00 0.00 3.51
3821 10791 1.295792 TGTGGACTTTTCGTGACAGC 58.704 50.000 0.00 0.00 0.00 4.40
3841 10811 0.602905 CCGGAGCGGGTTAATGGATC 60.603 60.000 0.00 0.00 44.15 3.36
3843 10813 0.391597 GGAGCGGGTTAATGGATCGA 59.608 55.000 0.00 0.00 0.00 3.59
3850 10820 1.880027 GGTTAATGGATCGACATGGGC 59.120 52.381 0.00 0.00 0.00 5.36
3851 10821 2.571212 GTTAATGGATCGACATGGGCA 58.429 47.619 0.00 0.00 0.00 5.36
3867 10837 5.417580 ACATGGGCAAACACGTTAAAGATAT 59.582 36.000 0.00 0.00 0.00 1.63
3879 10849 4.442893 CGTTAAAGATATGGAGTGAGGGCA 60.443 45.833 0.00 0.00 0.00 5.36
3905 10875 8.634335 TGTTTTCAATGATCCACAAGAGATAA 57.366 30.769 0.00 0.00 0.00 1.75
3921 10891 3.081061 AGATAAATTGAAGCGCACCACA 58.919 40.909 11.47 0.34 0.00 4.17
3925 10895 1.795170 ATTGAAGCGCACCACACCAC 61.795 55.000 11.47 0.00 0.00 4.16
3938 10908 2.487762 CCACACCACGTAAGCATTTCAT 59.512 45.455 0.00 0.00 45.62 2.57
3996 10966 9.429359 GTTTCATCATCCTACATATACTTGAGG 57.571 37.037 0.00 0.00 0.00 3.86
3998 10968 8.354711 TCATCATCCTACATATACTTGAGGAC 57.645 38.462 0.00 0.00 39.09 3.85
4025 10995 8.224620 AGTATGGATTAAGCTTAGGGATCATT 57.775 34.615 15.29 7.13 0.00 2.57
4026 10996 9.338968 AGTATGGATTAAGCTTAGGGATCATTA 57.661 33.333 15.29 6.42 0.00 1.90
4029 10999 8.218423 TGGATTAAGCTTAGGGATCATTATGA 57.782 34.615 15.29 0.00 0.00 2.15
4030 11000 8.103305 TGGATTAAGCTTAGGGATCATTATGAC 58.897 37.037 15.29 0.00 0.00 3.06
4031 11001 8.103305 GGATTAAGCTTAGGGATCATTATGACA 58.897 37.037 15.29 0.00 0.00 3.58
4032 11002 8.854614 ATTAAGCTTAGGGATCATTATGACAC 57.145 34.615 6.24 0.00 0.00 3.67
4033 11003 5.894298 AGCTTAGGGATCATTATGACACA 57.106 39.130 0.00 0.00 0.00 3.72
4034 11004 5.862845 AGCTTAGGGATCATTATGACACAG 58.137 41.667 0.00 0.00 0.00 3.66
4035 11005 5.367937 AGCTTAGGGATCATTATGACACAGT 59.632 40.000 0.00 0.00 0.00 3.55
4036 11006 5.698545 GCTTAGGGATCATTATGACACAGTC 59.301 44.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 9.875691 GTTGATATCTTTGAAGGCCTTTAATTT 57.124 29.630 22.13 12.70 0.00 1.82
50 51 2.094417 GTGCAGAGACGAAGGCAAATAC 59.906 50.000 0.00 0.00 38.10 1.89
60 293 1.452953 AAGTGGACGTGCAGAGACGA 61.453 55.000 11.09 0.00 42.10 4.20
74 307 4.918810 AAGTTGCAACTAGGAAAAGTGG 57.081 40.909 31.31 0.00 38.57 4.00
76 309 4.879545 TCGAAAGTTGCAACTAGGAAAAGT 59.120 37.500 31.31 11.33 38.57 2.66
91 324 7.162082 ACTTGGATAGTCTTTGATCGAAAGTT 58.838 34.615 13.69 8.69 41.75 2.66
93 326 7.436673 CCTACTTGGATAGTCTTTGATCGAAAG 59.563 40.741 9.89 9.89 39.43 2.62
98 331 6.239458 CCTCCCTACTTGGATAGTCTTTGATC 60.239 46.154 0.00 0.00 38.33 2.92
99 332 5.604650 CCTCCCTACTTGGATAGTCTTTGAT 59.395 44.000 0.00 0.00 38.33 2.57
102 335 4.299485 CCCTCCCTACTTGGATAGTCTTT 58.701 47.826 0.00 0.00 38.33 2.52
112 345 3.480133 CCCCGCCCTCCCTACTTG 61.480 72.222 0.00 0.00 0.00 3.16
123 356 1.452108 CAACATCCTTCTCCCCGCC 60.452 63.158 0.00 0.00 0.00 6.13
134 367 2.680577 CAAGAAGGCAAAGCAACATCC 58.319 47.619 0.00 0.00 0.00 3.51
184 461 6.966534 ACTTGTTTTCTCCTCACAATCATT 57.033 33.333 0.00 0.00 30.18 2.57
186 463 5.997746 CCTACTTGTTTTCTCCTCACAATCA 59.002 40.000 0.00 0.00 30.18 2.57
187 464 6.231211 TCCTACTTGTTTTCTCCTCACAATC 58.769 40.000 0.00 0.00 30.18 2.67
188 465 6.043243 TCTCCTACTTGTTTTCTCCTCACAAT 59.957 38.462 0.00 0.00 30.18 2.71
189 466 5.365605 TCTCCTACTTGTTTTCTCCTCACAA 59.634 40.000 0.00 0.00 0.00 3.33
191 468 5.244178 TCTCTCCTACTTGTTTTCTCCTCAC 59.756 44.000 0.00 0.00 0.00 3.51
192 469 5.394738 TCTCTCCTACTTGTTTTCTCCTCA 58.605 41.667 0.00 0.00 0.00 3.86
193 470 5.105513 CCTCTCTCCTACTTGTTTTCTCCTC 60.106 48.000 0.00 0.00 0.00 3.71
194 471 4.775253 CCTCTCTCCTACTTGTTTTCTCCT 59.225 45.833 0.00 0.00 0.00 3.69
195 472 4.773149 TCCTCTCTCCTACTTGTTTTCTCC 59.227 45.833 0.00 0.00 0.00 3.71
196 473 5.986501 TCCTCTCTCCTACTTGTTTTCTC 57.013 43.478 0.00 0.00 0.00 2.87
197 474 6.019748 TGATCCTCTCTCCTACTTGTTTTCT 58.980 40.000 0.00 0.00 0.00 2.52
198 475 6.153680 TCTGATCCTCTCTCCTACTTGTTTTC 59.846 42.308 0.00 0.00 0.00 2.29
199 476 6.019748 TCTGATCCTCTCTCCTACTTGTTTT 58.980 40.000 0.00 0.00 0.00 2.43
200 477 5.584913 TCTGATCCTCTCTCCTACTTGTTT 58.415 41.667 0.00 0.00 0.00 2.83
201 478 5.199982 TCTGATCCTCTCTCCTACTTGTT 57.800 43.478 0.00 0.00 0.00 2.83
202 479 4.871871 TCTGATCCTCTCTCCTACTTGT 57.128 45.455 0.00 0.00 0.00 3.16
203 480 6.514870 CGAATTCTGATCCTCTCTCCTACTTG 60.515 46.154 3.52 0.00 0.00 3.16
204 481 5.534654 CGAATTCTGATCCTCTCTCCTACTT 59.465 44.000 3.52 0.00 0.00 2.24
205 482 5.070001 CGAATTCTGATCCTCTCTCCTACT 58.930 45.833 3.52 0.00 0.00 2.57
206 483 4.825085 ACGAATTCTGATCCTCTCTCCTAC 59.175 45.833 3.52 0.00 0.00 3.18
207 484 5.055265 ACGAATTCTGATCCTCTCTCCTA 57.945 43.478 3.52 0.00 0.00 2.94
208 485 3.888930 GACGAATTCTGATCCTCTCTCCT 59.111 47.826 3.52 0.00 0.00 3.69
209 486 3.634448 TGACGAATTCTGATCCTCTCTCC 59.366 47.826 3.52 0.00 0.00 3.71
210 487 4.338118 AGTGACGAATTCTGATCCTCTCTC 59.662 45.833 3.52 0.00 0.00 3.20
211 488 4.277476 AGTGACGAATTCTGATCCTCTCT 58.723 43.478 3.52 0.00 0.00 3.10
217 494 9.249457 TCATTTATGTAGTGACGAATTCTGATC 57.751 33.333 3.52 0.00 0.00 2.92
223 500 8.788806 TGGTTTTCATTTATGTAGTGACGAATT 58.211 29.630 0.00 0.00 0.00 2.17
227 504 6.893759 TGTGGTTTTCATTTATGTAGTGACG 58.106 36.000 0.00 0.00 0.00 4.35
251 2806 8.766476 AGAAATATGGGTCGAAGATGATGATAT 58.234 33.333 0.00 0.00 40.67 1.63
296 2851 7.881232 ACGGAGTAAGGAAAAAGTTCAATGATA 59.119 33.333 0.00 0.00 41.94 2.15
302 2857 4.131596 CCACGGAGTAAGGAAAAAGTTCA 58.868 43.478 0.00 0.00 41.61 3.18
329 2884 1.947456 GGATTAGTTGAATGCCCGTCC 59.053 52.381 0.00 0.00 29.85 4.79
330 2885 2.354821 GTGGATTAGTTGAATGCCCGTC 59.645 50.000 0.00 0.00 35.07 4.79
331 2886 2.026262 AGTGGATTAGTTGAATGCCCGT 60.026 45.455 0.00 0.00 35.07 5.28
367 2922 5.911280 CCTATTGTTGAGCTCGCAAATATTG 59.089 40.000 21.82 10.57 0.00 1.90
533 3091 2.739913 CGGAATTGCGTGAGTAGGAAAA 59.260 45.455 11.61 0.00 0.00 2.29
537 3095 1.278238 GTCGGAATTGCGTGAGTAGG 58.722 55.000 19.14 0.00 0.00 3.18
540 3098 0.670546 CTGGTCGGAATTGCGTGAGT 60.671 55.000 19.14 0.00 0.00 3.41
541 3099 0.389817 TCTGGTCGGAATTGCGTGAG 60.390 55.000 19.14 12.70 0.00 3.51
553 3116 0.859232 CCAACTTGTTCGTCTGGTCG 59.141 55.000 0.00 0.00 0.00 4.79
593 3156 3.032609 GGCCATCAGCGATCGTCG 61.033 66.667 17.81 8.27 45.17 5.12
613 3176 1.387295 GGGCTTGCTAGTCCAATGCC 61.387 60.000 14.27 0.11 45.96 4.40
623 3186 2.884639 GTTTTGAGAGTTGGGCTTGCTA 59.115 45.455 0.00 0.00 0.00 3.49
636 3199 5.008514 TGAACAAATCATGCTCGTTTTGAGA 59.991 36.000 13.14 0.00 39.08 3.27
656 3219 2.870372 GGAGGCATGCACGTGAAC 59.130 61.111 22.23 2.42 0.00 3.18
685 3248 0.028110 GACGAATCAGCCGGCAATTC 59.972 55.000 30.29 30.29 34.67 2.17
754 3317 4.777140 AAACTTCAAACGTGTACGGTAC 57.223 40.909 11.33 11.33 39.00 3.34
755 3318 4.867047 TCAAAACTTCAAACGTGTACGGTA 59.133 37.500 9.40 0.00 39.00 4.02
756 3319 3.683822 TCAAAACTTCAAACGTGTACGGT 59.316 39.130 9.40 0.00 43.60 4.83
757 3320 4.261736 TCAAAACTTCAAACGTGTACGG 57.738 40.909 9.40 0.00 44.95 4.02
798 3361 3.738791 TGATGCTTGTATGCCGTAATACG 59.261 43.478 5.74 5.74 42.11 3.06
800 3363 5.762711 ACATTGATGCTTGTATGCCGTAATA 59.237 36.000 0.00 0.00 0.00 0.98
801 3364 4.580167 ACATTGATGCTTGTATGCCGTAAT 59.420 37.500 0.00 0.00 0.00 1.89
802 3365 3.944650 ACATTGATGCTTGTATGCCGTAA 59.055 39.130 0.00 0.00 0.00 3.18
882 3445 2.161855 TCCAGTTCACATTGGATGCAC 58.838 47.619 0.00 0.00 38.53 4.57
894 3457 5.793817 TGTACTACGTACTACTCCAGTTCA 58.206 41.667 11.91 1.28 39.49 3.18
915 3478 4.454504 CCGGCAATTTCTTGTAAGTACTGT 59.545 41.667 0.00 0.00 34.69 3.55
916 3479 4.671766 GCCGGCAATTTCTTGTAAGTACTG 60.672 45.833 24.80 0.00 34.69 2.74
917 3480 3.439129 GCCGGCAATTTCTTGTAAGTACT 59.561 43.478 24.80 0.00 34.69 2.73
918 3481 3.439129 AGCCGGCAATTTCTTGTAAGTAC 59.561 43.478 31.54 0.00 34.69 2.73
919 3482 3.438781 CAGCCGGCAATTTCTTGTAAGTA 59.561 43.478 31.54 0.00 34.69 2.24
920 3483 2.228822 CAGCCGGCAATTTCTTGTAAGT 59.771 45.455 31.54 0.00 34.69 2.24
951 3514 2.343758 GTGCAGAGACGGAGGCAA 59.656 61.111 0.00 0.00 38.10 4.52
996 3561 4.622933 GCGGAGTATGCATATATTGTGGGA 60.623 45.833 10.16 0.00 0.00 4.37
1085 3650 1.410517 GCAGATCTTGATGGAGGTCGA 59.589 52.381 0.00 0.00 31.94 4.20
1097 3662 3.093057 ACGACAAGGTCTAGCAGATCTT 58.907 45.455 0.00 6.02 46.04 2.40
1251 3817 1.675641 GCTGCCATTGGTCGGAGTT 60.676 57.895 4.26 0.00 0.00 3.01
1257 3823 1.389609 CCCATCTGCTGCCATTGGTC 61.390 60.000 4.26 0.00 0.00 4.02
1291 3858 1.146930 ATCGCGCATTGTCAGGGAT 59.853 52.632 8.75 0.00 33.58 3.85
1402 4446 9.410556 GAAAATATTGTGCAAGACATAGTTGTT 57.589 29.630 0.00 0.00 35.79 2.83
1429 4473 0.757188 AGAGGCACATACTCGAGGGG 60.757 60.000 18.41 8.02 39.90 4.79
1557 4601 6.183360 CCTTTCCTGGTAGAATTACGATGAGA 60.183 42.308 0.00 0.00 0.00 3.27
1620 4670 7.128331 CAGAAAAGGCAATGTCAACGATATAG 58.872 38.462 0.00 0.00 0.00 1.31
1641 4691 3.582647 TGCCATAGAGTTTGTCTCCAGAA 59.417 43.478 0.00 0.00 43.71 3.02
1668 4718 2.614013 ATGAGGTCCCCGGCCTTT 60.614 61.111 0.00 0.00 36.29 3.11
1748 4805 1.001068 TGTAATCGAGTGGTTGCCGAA 59.999 47.619 0.00 0.00 35.87 4.30
1749 4806 0.604073 TGTAATCGAGTGGTTGCCGA 59.396 50.000 0.00 0.00 36.72 5.54
1750 4807 1.327460 CATGTAATCGAGTGGTTGCCG 59.673 52.381 0.00 0.00 0.00 5.69
1751 4808 1.670811 CCATGTAATCGAGTGGTTGCC 59.329 52.381 0.00 0.00 0.00 4.52
1752 4809 2.627945 TCCATGTAATCGAGTGGTTGC 58.372 47.619 0.00 0.00 33.47 4.17
1753 4810 6.705825 TCATAATCCATGTAATCGAGTGGTTG 59.294 38.462 0.00 0.00 35.96 3.77
1754 4811 6.826668 TCATAATCCATGTAATCGAGTGGTT 58.173 36.000 0.00 0.00 35.96 3.67
1768 4825 3.501019 GGAGGCCACCAATCATAATCCAT 60.501 47.826 15.24 0.00 0.00 3.41
1770 4827 2.519013 GGAGGCCACCAATCATAATCC 58.481 52.381 15.24 0.00 0.00 3.01
1800 4857 6.890979 TCAATGTCTCTATCATCGTCATCT 57.109 37.500 0.00 0.00 0.00 2.90
1820 4877 4.893424 TCGTAGTCGTCATCATCATCAA 57.107 40.909 0.00 0.00 38.33 2.57
1837 4897 1.484653 CTCCCCCACAACATCATCGTA 59.515 52.381 0.00 0.00 0.00 3.43
1839 4902 0.464373 CCTCCCCCACAACATCATCG 60.464 60.000 0.00 0.00 0.00 3.84
1865 4928 2.159099 TCCTCATCAATGGCTACGTCAC 60.159 50.000 0.00 0.00 0.00 3.67
1892 5000 2.959171 GCCTCCATCTTCTCCTCTTCCT 60.959 54.545 0.00 0.00 0.00 3.36
1915 5023 1.464608 CGCAGTTTTCACATCCATCGT 59.535 47.619 0.00 0.00 0.00 3.73
1918 5026 1.176527 CCCGCAGTTTTCACATCCAT 58.823 50.000 0.00 0.00 0.00 3.41
1937 5054 2.814280 ATCGACGACCCCATTATCAC 57.186 50.000 0.00 0.00 0.00 3.06
1972 5092 5.806502 CGTCATTATCATTTGCCATTGTTGT 59.193 36.000 0.00 0.00 0.00 3.32
1990 5110 3.081804 GGTCCTTTTCACCATCGTCATT 58.918 45.455 0.00 0.00 33.63 2.57
2027 5147 9.814899 TTTCTTTATTGCCATTGTAATATGTGG 57.185 29.630 0.00 0.00 30.54 4.17
2037 5159 7.434307 CAGCTAGTGATTTCTTTATTGCCATTG 59.566 37.037 0.00 0.00 0.00 2.82
2038 5160 7.417116 CCAGCTAGTGATTTCTTTATTGCCATT 60.417 37.037 0.00 0.00 0.00 3.16
2042 5165 5.163622 TGCCAGCTAGTGATTTCTTTATTGC 60.164 40.000 0.00 0.00 0.00 3.56
2082 5210 0.404040 TCACCATGAACAACTCCCCC 59.596 55.000 0.00 0.00 0.00 5.40
2089 5221 1.601903 GCGTGTCTTCACCATGAACAA 59.398 47.619 0.00 0.00 41.09 2.83
2113 5247 7.321717 ACATGGTATAATCTGGAAGCATACT 57.678 36.000 0.00 0.00 0.00 2.12
2166 9121 4.183101 CCCATTTGCATGTGTTAACATCC 58.817 43.478 12.26 0.02 45.50 3.51
2214 9169 4.563580 GGGCTGATGAAGAGTGTTTGACTA 60.564 45.833 0.00 0.00 33.83 2.59
2215 9170 3.406764 GGCTGATGAAGAGTGTTTGACT 58.593 45.455 0.00 0.00 37.76 3.41
2219 9174 2.373169 TCTGGGCTGATGAAGAGTGTTT 59.627 45.455 0.00 0.00 0.00 2.83
2221 9176 1.277557 GTCTGGGCTGATGAAGAGTGT 59.722 52.381 0.00 0.00 0.00 3.55
2434 9391 7.820044 TTAGCACTTTTTAAAACTGTTGTGG 57.180 32.000 0.00 0.00 0.00 4.17
2448 9409 8.355169 CCACTATAATGCATCATTAGCACTTTT 58.645 33.333 0.00 0.00 45.95 2.27
2452 9413 7.621428 ATCCACTATAATGCATCATTAGCAC 57.379 36.000 0.00 0.00 45.95 4.40
2572 9537 6.486657 CCATGACGTCCCTACAAATAAATGAT 59.513 38.462 14.12 0.00 0.00 2.45
2575 9540 5.996644 TCCATGACGTCCCTACAAATAAAT 58.003 37.500 14.12 0.00 0.00 1.40
2583 9548 1.192428 AGGTTCCATGACGTCCCTAC 58.808 55.000 14.12 4.14 0.00 3.18
2612 9582 7.542130 CCAAATATTGTCCAAGCTTACAGAAAC 59.458 37.037 0.00 0.00 0.00 2.78
2642 9612 7.595875 TGACAATCAAGCAAATTATGACTGTTG 59.404 33.333 0.00 0.00 34.11 3.33
2643 9613 7.660112 TGACAATCAAGCAAATTATGACTGTT 58.340 30.769 0.00 0.00 34.11 3.16
2657 9627 3.747193 CACAACCGTATGACAATCAAGC 58.253 45.455 0.00 0.00 0.00 4.01
2660 9630 2.482336 GTGCACAACCGTATGACAATCA 59.518 45.455 13.17 0.00 0.00 2.57
2661 9631 2.482336 TGTGCACAACCGTATGACAATC 59.518 45.455 19.28 0.00 0.00 2.67
2662 9632 2.483877 CTGTGCACAACCGTATGACAAT 59.516 45.455 21.98 0.00 0.00 2.71
2663 9633 1.870402 CTGTGCACAACCGTATGACAA 59.130 47.619 21.98 0.00 0.00 3.18
2664 9634 1.507562 CTGTGCACAACCGTATGACA 58.492 50.000 21.98 0.00 0.00 3.58
2665 9635 0.796312 CCTGTGCACAACCGTATGAC 59.204 55.000 21.98 0.00 0.00 3.06
2666 9636 0.682292 TCCTGTGCACAACCGTATGA 59.318 50.000 21.98 6.03 0.00 2.15
2667 9637 0.796312 GTCCTGTGCACAACCGTATG 59.204 55.000 21.98 7.01 0.00 2.39
2668 9638 0.321298 GGTCCTGTGCACAACCGTAT 60.321 55.000 21.73 0.00 0.00 3.06
2669 9639 1.070105 GGTCCTGTGCACAACCGTA 59.930 57.895 21.73 3.92 0.00 4.02
2706 9676 3.117046 GTCTAAGCACGAGTAATGGAGC 58.883 50.000 0.00 0.00 0.00 4.70
2727 9697 2.361610 AACGGCCATGCTCAAGGG 60.362 61.111 2.24 0.00 0.00 3.95
2755 9725 9.586150 GTAACTTATCATCGATGCACAAATTAG 57.414 33.333 20.81 13.14 0.00 1.73
2795 9765 5.186021 TCAGGAAAGAGCTTTAGTCTAGTGG 59.814 44.000 0.00 0.00 32.11 4.00
2808 9778 1.134848 ACGCATCTCTCAGGAAAGAGC 60.135 52.381 0.00 0.00 42.15 4.09
2825 9795 2.788786 CGATTTGGCATAAATCCAACGC 59.211 45.455 15.73 0.00 42.75 4.84
2826 9796 4.285807 TCGATTTGGCATAAATCCAACG 57.714 40.909 15.73 8.30 42.75 4.10
2903 9873 1.210538 GAGACCGGGGGTAATCCTTT 58.789 55.000 6.32 0.00 35.25 3.11
2904 9874 0.342313 AGAGACCGGGGGTAATCCTT 59.658 55.000 6.32 0.00 35.25 3.36
2936 9906 8.987890 ACTTTGATTAATAAAATGGTTGTGTGC 58.012 29.630 0.00 0.00 0.00 4.57
2944 9914 9.781834 TCGTTGCTACTTTGATTAATAAAATGG 57.218 29.630 0.00 0.00 0.00 3.16
2975 9945 6.540551 TGCTTGTGAACTTGTGTTGAACTATA 59.459 34.615 0.00 0.00 36.39 1.31
2977 9947 4.697828 TGCTTGTGAACTTGTGTTGAACTA 59.302 37.500 0.00 0.00 36.39 2.24
2984 9954 3.505680 TGAGTTTGCTTGTGAACTTGTGT 59.494 39.130 0.00 0.00 36.31 3.72
2994 9964 4.020662 TCCTTTTGGTTTGAGTTTGCTTGT 60.021 37.500 0.00 0.00 41.38 3.16
3091 10061 5.080969 AGTTGCCCAGATCAAATTCAATG 57.919 39.130 0.00 0.00 0.00 2.82
3100 10070 1.704628 TGGAAGAAGTTGCCCAGATCA 59.295 47.619 0.00 0.00 0.00 2.92
3152 10122 2.772691 CCTAGTCGCCCCTCGTCAC 61.773 68.421 0.00 0.00 39.67 3.67
3213 10183 1.478105 GAAACAGGTTCATCATGGGGC 59.522 52.381 0.00 0.00 36.15 5.80
3265 10235 9.173939 CGCATTTCTAATAGGAGCAAAAATTAG 57.826 33.333 0.00 0.00 34.60 1.73
3278 10248 7.534085 TTAGGTGTTGTCGCATTTCTAATAG 57.466 36.000 0.00 0.00 0.00 1.73
3284 10254 6.417191 TTCTATTAGGTGTTGTCGCATTTC 57.583 37.500 0.00 0.00 0.00 2.17
3294 10264 9.442047 CTTCTGAAGTTGATTCTATTAGGTGTT 57.558 33.333 9.26 0.00 38.83 3.32
3295 10265 7.550906 GCTTCTGAAGTTGATTCTATTAGGTGT 59.449 37.037 17.97 0.00 38.83 4.16
3296 10266 7.550551 TGCTTCTGAAGTTGATTCTATTAGGTG 59.449 37.037 17.97 0.00 38.83 4.00
3297 10267 7.624549 TGCTTCTGAAGTTGATTCTATTAGGT 58.375 34.615 17.97 0.00 38.83 3.08
3298 10268 7.768120 ACTGCTTCTGAAGTTGATTCTATTAGG 59.232 37.037 17.97 0.00 38.83 2.69
3299 10269 8.715191 ACTGCTTCTGAAGTTGATTCTATTAG 57.285 34.615 17.97 3.88 38.83 1.73
3300 10270 9.507329 AAACTGCTTCTGAAGTTGATTCTATTA 57.493 29.630 17.97 0.00 41.04 0.98
3301 10271 7.992754 AACTGCTTCTGAAGTTGATTCTATT 57.007 32.000 17.97 0.09 40.42 1.73
3302 10272 7.446625 ACAAACTGCTTCTGAAGTTGATTCTAT 59.553 33.333 19.28 0.67 41.04 1.98
3303 10273 6.767902 ACAAACTGCTTCTGAAGTTGATTCTA 59.232 34.615 19.28 0.24 41.04 2.10
3304 10274 5.591877 ACAAACTGCTTCTGAAGTTGATTCT 59.408 36.000 19.28 2.78 41.04 2.40
3305 10275 5.825507 ACAAACTGCTTCTGAAGTTGATTC 58.174 37.500 19.28 4.98 41.04 2.52
3306 10276 5.841957 ACAAACTGCTTCTGAAGTTGATT 57.158 34.783 19.28 11.24 41.04 2.57
3307 10277 5.591877 AGAACAAACTGCTTCTGAAGTTGAT 59.408 36.000 19.28 11.28 41.04 2.57
3308 10278 4.943705 AGAACAAACTGCTTCTGAAGTTGA 59.056 37.500 19.28 5.87 41.04 3.18
3309 10279 5.240713 AGAACAAACTGCTTCTGAAGTTG 57.759 39.130 17.97 15.55 41.04 3.16
3310 10280 4.336713 GGAGAACAAACTGCTTCTGAAGTT 59.663 41.667 17.97 3.51 43.65 2.66
3311 10281 3.879892 GGAGAACAAACTGCTTCTGAAGT 59.120 43.478 17.97 0.00 32.20 3.01
3312 10282 4.133078 AGGAGAACAAACTGCTTCTGAAG 58.867 43.478 13.02 13.02 35.11 3.02
3313 10283 4.156455 AGGAGAACAAACTGCTTCTGAA 57.844 40.909 0.00 0.00 35.11 3.02
3314 10284 3.845781 AGGAGAACAAACTGCTTCTGA 57.154 42.857 0.00 0.00 35.11 3.27
3315 10285 4.907879 AAAGGAGAACAAACTGCTTCTG 57.092 40.909 0.00 0.00 45.13 3.02
3316 10286 5.529060 CAGTAAAGGAGAACAAACTGCTTCT 59.471 40.000 0.00 0.00 45.13 2.85
3317 10287 5.278022 CCAGTAAAGGAGAACAAACTGCTTC 60.278 44.000 0.00 0.00 45.13 3.86
3319 10289 4.137543 CCAGTAAAGGAGAACAAACTGCT 58.862 43.478 0.00 0.00 40.11 4.24
3320 10290 3.253432 CCCAGTAAAGGAGAACAAACTGC 59.747 47.826 0.00 0.00 34.41 4.40
3321 10291 3.821033 CCCCAGTAAAGGAGAACAAACTG 59.179 47.826 0.00 0.00 35.29 3.16
3322 10292 3.720002 TCCCCAGTAAAGGAGAACAAACT 59.280 43.478 0.00 0.00 0.00 2.66
3323 10293 3.819337 GTCCCCAGTAAAGGAGAACAAAC 59.181 47.826 0.00 0.00 31.17 2.93
3324 10294 3.720002 AGTCCCCAGTAAAGGAGAACAAA 59.280 43.478 0.00 0.00 31.17 2.83
3325 10295 3.323775 AGTCCCCAGTAAAGGAGAACAA 58.676 45.455 0.00 0.00 31.17 2.83
3326 10296 2.986050 AGTCCCCAGTAAAGGAGAACA 58.014 47.619 0.00 0.00 31.17 3.18
3327 10297 5.243981 GTTTAGTCCCCAGTAAAGGAGAAC 58.756 45.833 0.00 0.00 29.55 3.01
3328 10298 4.287845 GGTTTAGTCCCCAGTAAAGGAGAA 59.712 45.833 0.00 0.00 29.55 2.87
3329 10299 3.842436 GGTTTAGTCCCCAGTAAAGGAGA 59.158 47.826 0.00 0.00 29.55 3.71
3330 10300 3.585732 TGGTTTAGTCCCCAGTAAAGGAG 59.414 47.826 0.00 0.00 29.55 3.69
3331 10301 3.600433 TGGTTTAGTCCCCAGTAAAGGA 58.400 45.455 0.00 0.00 29.55 3.36
3332 10302 4.524053 GATGGTTTAGTCCCCAGTAAAGG 58.476 47.826 0.00 0.00 33.39 3.11
3333 10303 4.189231 CGATGGTTTAGTCCCCAGTAAAG 58.811 47.826 0.00 0.00 33.39 1.85
3334 10304 3.054948 CCGATGGTTTAGTCCCCAGTAAA 60.055 47.826 0.00 0.00 33.39 2.01
3335 10305 2.502538 CCGATGGTTTAGTCCCCAGTAA 59.497 50.000 0.00 0.00 33.39 2.24
3336 10306 2.112998 CCGATGGTTTAGTCCCCAGTA 58.887 52.381 0.00 0.00 33.39 2.74
3337 10307 0.909623 CCGATGGTTTAGTCCCCAGT 59.090 55.000 0.00 0.00 33.39 4.00
3338 10308 0.909623 ACCGATGGTTTAGTCCCCAG 59.090 55.000 0.00 0.00 33.39 4.45
3339 10309 0.616371 CACCGATGGTTTAGTCCCCA 59.384 55.000 0.00 0.00 31.02 4.96
3340 10310 0.906775 TCACCGATGGTTTAGTCCCC 59.093 55.000 0.00 0.00 31.02 4.81
3341 10311 3.277142 AATCACCGATGGTTTAGTCCC 57.723 47.619 0.00 0.00 31.02 4.46
3342 10312 4.457949 ACAAAATCACCGATGGTTTAGTCC 59.542 41.667 0.00 0.00 38.23 3.85
3343 10313 5.622770 ACAAAATCACCGATGGTTTAGTC 57.377 39.130 0.00 0.00 38.23 2.59
3344 10314 7.513371 TTTACAAAATCACCGATGGTTTAGT 57.487 32.000 0.00 0.00 38.23 2.24
3345 10315 8.980143 AATTTACAAAATCACCGATGGTTTAG 57.020 30.769 0.00 0.00 38.23 1.85
3346 10316 9.765795 AAAATTTACAAAATCACCGATGGTTTA 57.234 25.926 0.00 0.00 38.23 2.01
3347 10317 8.669946 AAAATTTACAAAATCACCGATGGTTT 57.330 26.923 0.00 0.00 41.08 3.27
3348 10318 8.555361 CAAAAATTTACAAAATCACCGATGGTT 58.445 29.630 0.00 0.00 31.02 3.67
3349 10319 7.307692 GCAAAAATTTACAAAATCACCGATGGT 60.308 33.333 0.00 0.00 35.62 3.55
3350 10320 7.014702 GCAAAAATTTACAAAATCACCGATGG 58.985 34.615 0.00 0.00 0.00 3.51
3351 10321 7.795859 AGCAAAAATTTACAAAATCACCGATG 58.204 30.769 0.00 0.00 0.00 3.84
3352 10322 7.655328 TGAGCAAAAATTTACAAAATCACCGAT 59.345 29.630 0.00 0.00 0.00 4.18
3353 10323 6.980978 TGAGCAAAAATTTACAAAATCACCGA 59.019 30.769 0.00 0.00 0.00 4.69
3354 10324 7.171447 TGAGCAAAAATTTACAAAATCACCG 57.829 32.000 0.00 0.00 0.00 4.94
3373 10343 9.494271 GGTCTTATCACATTTCTAATATGAGCA 57.506 33.333 0.00 0.00 31.69 4.26
3374 10344 9.717942 AGGTCTTATCACATTTCTAATATGAGC 57.282 33.333 0.00 0.00 31.59 4.26
3403 10373 6.767902 ACAAACAGCTTCTGAAGTTGATTCTA 59.232 34.615 32.02 0.00 41.64 2.10
3411 10381 3.879892 GGAGAACAAACAGCTTCTGAAGT 59.120 43.478 17.97 3.37 35.18 3.01
3424 10394 6.649557 GGATCGAAGAAGTAAAGGAGAACAAA 59.350 38.462 0.00 0.00 43.58 2.83
3426 10396 5.245301 TGGATCGAAGAAGTAAAGGAGAACA 59.755 40.000 0.00 0.00 43.58 3.18
3433 10403 7.404985 CAATGACATGGATCGAAGAAGTAAAG 58.595 38.462 0.00 0.00 43.58 1.85
3436 10406 4.811024 GCAATGACATGGATCGAAGAAGTA 59.189 41.667 0.00 0.00 43.58 2.24
3456 10426 3.067320 TGAATTCACGTTGATGTTGGCAA 59.933 39.130 3.38 0.00 0.00 4.52
3462 10432 4.996758 TGTCTCATGAATTCACGTTGATGT 59.003 37.500 11.07 0.00 0.00 3.06
3475 10445 3.523157 TCCTTATGGCCTTGTCTCATGAA 59.477 43.478 3.32 0.00 0.00 2.57
3482 10452 1.408822 CCCACTCCTTATGGCCTTGTC 60.409 57.143 3.32 0.00 35.74 3.18
3484 10454 0.753111 GCCCACTCCTTATGGCCTTG 60.753 60.000 3.32 0.00 37.94 3.61
3489 10459 0.625849 ACAAGGCCCACTCCTTATGG 59.374 55.000 0.00 0.00 44.24 2.74
3494 10464 2.526873 ACGACAAGGCCCACTCCT 60.527 61.111 0.00 0.00 38.31 3.69
3502 10472 1.583054 AGAAAGTCACACGACAAGGC 58.417 50.000 0.00 0.00 45.23 4.35
3507 10477 3.802685 AGCAAGTAAGAAAGTCACACGAC 59.197 43.478 0.00 0.00 42.95 4.34
3509 10479 3.802139 TGAGCAAGTAAGAAAGTCACACG 59.198 43.478 0.00 0.00 0.00 4.49
3520 10490 4.330074 CCGATAACAACCTGAGCAAGTAAG 59.670 45.833 0.00 0.00 0.00 2.34
3549 10519 5.170959 TCCTCCTCTACCCTATGACTATGA 58.829 45.833 0.00 0.00 0.00 2.15
3554 10524 2.894765 GCTTCCTCCTCTACCCTATGAC 59.105 54.545 0.00 0.00 0.00 3.06
3556 10526 2.896685 CTGCTTCCTCCTCTACCCTATG 59.103 54.545 0.00 0.00 0.00 2.23
3580 10550 0.395311 CCACTCCCTACTCCGCTACA 60.395 60.000 0.00 0.00 0.00 2.74
3585 10555 0.970937 TGCTTCCACTCCCTACTCCG 60.971 60.000 0.00 0.00 0.00 4.63
3597 10567 1.604308 CCACTGCCACATGCTTCCA 60.604 57.895 0.00 0.00 42.00 3.53
3613 10583 3.003173 CCTTCCCACTCGCCTCCA 61.003 66.667 0.00 0.00 0.00 3.86
3622 10592 0.608640 TCGCTTCTTCTCCTTCCCAC 59.391 55.000 0.00 0.00 0.00 4.61
3623 10593 0.898320 CTCGCTTCTTCTCCTTCCCA 59.102 55.000 0.00 0.00 0.00 4.37
3626 10596 0.899019 ACCCTCGCTTCTTCTCCTTC 59.101 55.000 0.00 0.00 0.00 3.46
3629 10599 1.219393 CCACCCTCGCTTCTTCTCC 59.781 63.158 0.00 0.00 0.00 3.71
3630 10600 1.219393 CCCACCCTCGCTTCTTCTC 59.781 63.158 0.00 0.00 0.00 2.87
3631 10601 1.229209 TCCCACCCTCGCTTCTTCT 60.229 57.895 0.00 0.00 0.00 2.85
3632 10602 1.219393 CTCCCACCCTCGCTTCTTC 59.781 63.158 0.00 0.00 0.00 2.87
3633 10603 0.836400 TTCTCCCACCCTCGCTTCTT 60.836 55.000 0.00 0.00 0.00 2.52
3634 10604 0.618968 ATTCTCCCACCCTCGCTTCT 60.619 55.000 0.00 0.00 0.00 2.85
3635 10605 1.069358 CTATTCTCCCACCCTCGCTTC 59.931 57.143 0.00 0.00 0.00 3.86
3636 10606 1.123928 CTATTCTCCCACCCTCGCTT 58.876 55.000 0.00 0.00 0.00 4.68
3637 10607 0.760945 CCTATTCTCCCACCCTCGCT 60.761 60.000 0.00 0.00 0.00 4.93
3638 10608 1.749033 CCTATTCTCCCACCCTCGC 59.251 63.158 0.00 0.00 0.00 5.03
3639 10609 1.749033 GCCTATTCTCCCACCCTCG 59.251 63.158 0.00 0.00 0.00 4.63
3640 10610 0.759436 TCGCCTATTCTCCCACCCTC 60.759 60.000 0.00 0.00 0.00 4.30
3641 10611 0.326238 TTCGCCTATTCTCCCACCCT 60.326 55.000 0.00 0.00 0.00 4.34
3642 10612 0.106894 CTTCGCCTATTCTCCCACCC 59.893 60.000 0.00 0.00 0.00 4.61
3643 10613 0.106894 CCTTCGCCTATTCTCCCACC 59.893 60.000 0.00 0.00 0.00 4.61
3644 10614 0.106894 CCCTTCGCCTATTCTCCCAC 59.893 60.000 0.00 0.00 0.00 4.61
3645 10615 1.054406 CCCCTTCGCCTATTCTCCCA 61.054 60.000 0.00 0.00 0.00 4.37
3646 10616 0.763223 TCCCCTTCGCCTATTCTCCC 60.763 60.000 0.00 0.00 0.00 4.30
3647 10617 1.129058 TTCCCCTTCGCCTATTCTCC 58.871 55.000 0.00 0.00 0.00 3.71
3648 10618 1.485066 TGTTCCCCTTCGCCTATTCTC 59.515 52.381 0.00 0.00 0.00 2.87
3649 10619 1.580059 TGTTCCCCTTCGCCTATTCT 58.420 50.000 0.00 0.00 0.00 2.40
3650 10620 2.158813 TCATGTTCCCCTTCGCCTATTC 60.159 50.000 0.00 0.00 0.00 1.75
3651 10621 1.843851 TCATGTTCCCCTTCGCCTATT 59.156 47.619 0.00 0.00 0.00 1.73
3652 10622 1.507140 TCATGTTCCCCTTCGCCTAT 58.493 50.000 0.00 0.00 0.00 2.57
3653 10623 1.209504 CTTCATGTTCCCCTTCGCCTA 59.790 52.381 0.00 0.00 0.00 3.93
3654 10624 0.035056 CTTCATGTTCCCCTTCGCCT 60.035 55.000 0.00 0.00 0.00 5.52
3655 10625 1.657751 GCTTCATGTTCCCCTTCGCC 61.658 60.000 0.00 0.00 0.00 5.54
3656 10626 1.803289 GCTTCATGTTCCCCTTCGC 59.197 57.895 0.00 0.00 0.00 4.70
3657 10627 0.673644 ACGCTTCATGTTCCCCTTCG 60.674 55.000 0.00 0.00 0.00 3.79
3658 10628 2.396590 TACGCTTCATGTTCCCCTTC 57.603 50.000 0.00 0.00 0.00 3.46
3659 10629 2.224670 TGTTACGCTTCATGTTCCCCTT 60.225 45.455 0.00 0.00 0.00 3.95
3660 10630 1.349688 TGTTACGCTTCATGTTCCCCT 59.650 47.619 0.00 0.00 0.00 4.79
3661 10631 1.816074 TGTTACGCTTCATGTTCCCC 58.184 50.000 0.00 0.00 0.00 4.81
3662 10632 2.812011 AGTTGTTACGCTTCATGTTCCC 59.188 45.455 0.00 0.00 0.00 3.97
3663 10633 4.024387 TCAAGTTGTTACGCTTCATGTTCC 60.024 41.667 2.11 0.00 0.00 3.62
3664 10634 5.090652 TCAAGTTGTTACGCTTCATGTTC 57.909 39.130 2.11 0.00 0.00 3.18
3665 10635 4.024048 CCTCAAGTTGTTACGCTTCATGTT 60.024 41.667 2.11 0.00 0.00 2.71
3666 10636 3.498397 CCTCAAGTTGTTACGCTTCATGT 59.502 43.478 2.11 0.00 0.00 3.21
3667 10637 3.498397 ACCTCAAGTTGTTACGCTTCATG 59.502 43.478 2.11 0.00 0.00 3.07
3668 10638 3.740115 ACCTCAAGTTGTTACGCTTCAT 58.260 40.909 2.11 0.00 0.00 2.57
3669 10639 3.188159 ACCTCAAGTTGTTACGCTTCA 57.812 42.857 2.11 0.00 0.00 3.02
3680 10650 2.438021 TGTCTACAGCCAACCTCAAGTT 59.562 45.455 0.00 0.00 40.16 2.66
3681 10651 2.047061 TGTCTACAGCCAACCTCAAGT 58.953 47.619 0.00 0.00 0.00 3.16
3682 10652 2.839486 TGTCTACAGCCAACCTCAAG 57.161 50.000 0.00 0.00 0.00 3.02
3683 10653 2.810400 GCTTGTCTACAGCCAACCTCAA 60.810 50.000 0.00 0.00 0.00 3.02
3684 10654 1.270839 GCTTGTCTACAGCCAACCTCA 60.271 52.381 0.00 0.00 0.00 3.86
3685 10655 1.002544 AGCTTGTCTACAGCCAACCTC 59.997 52.381 0.00 0.00 0.00 3.85
3686 10656 1.059913 AGCTTGTCTACAGCCAACCT 58.940 50.000 0.00 0.00 0.00 3.50
3687 10657 1.160137 CAGCTTGTCTACAGCCAACC 58.840 55.000 0.00 0.00 0.00 3.77
3688 10658 1.801178 GTCAGCTTGTCTACAGCCAAC 59.199 52.381 0.00 0.00 0.00 3.77
3689 10659 1.270839 GGTCAGCTTGTCTACAGCCAA 60.271 52.381 0.00 0.00 0.00 4.52
3690 10660 0.321671 GGTCAGCTTGTCTACAGCCA 59.678 55.000 0.00 0.00 0.00 4.75
3691 10661 0.321671 TGGTCAGCTTGTCTACAGCC 59.678 55.000 0.00 0.00 0.00 4.85
3692 10662 1.433534 GTGGTCAGCTTGTCTACAGC 58.566 55.000 0.00 0.00 0.00 4.40
3693 10663 1.620819 AGGTGGTCAGCTTGTCTACAG 59.379 52.381 0.00 0.00 35.28 2.74
3694 10664 1.717032 AGGTGGTCAGCTTGTCTACA 58.283 50.000 0.00 0.00 35.28 2.74
3695 10665 2.417515 GCTAGGTGGTCAGCTTGTCTAC 60.418 54.545 8.01 0.00 40.09 2.59
3696 10666 1.825474 GCTAGGTGGTCAGCTTGTCTA 59.175 52.381 8.01 0.00 40.09 2.59
3697 10667 0.610687 GCTAGGTGGTCAGCTTGTCT 59.389 55.000 8.01 0.00 40.09 3.41
3698 10668 0.610687 AGCTAGGTGGTCAGCTTGTC 59.389 55.000 8.01 3.71 45.80 3.18
3699 10669 1.938585 TAGCTAGGTGGTCAGCTTGT 58.061 50.000 4.27 1.34 45.80 3.16
3700 10670 2.898705 CTTAGCTAGGTGGTCAGCTTG 58.101 52.381 4.27 7.52 45.80 4.01
3701 10671 1.208293 GCTTAGCTAGGTGGTCAGCTT 59.792 52.381 4.27 0.00 45.80 3.74
3703 10673 0.537188 TGCTTAGCTAGGTGGTCAGC 59.463 55.000 5.60 4.66 42.02 4.26
3704 10674 2.432146 TCATGCTTAGCTAGGTGGTCAG 59.568 50.000 5.60 0.00 0.00 3.51
3705 10675 2.168521 GTCATGCTTAGCTAGGTGGTCA 59.831 50.000 5.60 0.00 0.00 4.02
3706 10676 2.168521 TGTCATGCTTAGCTAGGTGGTC 59.831 50.000 5.60 0.00 0.00 4.02
3707 10677 2.187958 TGTCATGCTTAGCTAGGTGGT 58.812 47.619 5.60 0.00 0.00 4.16
3708 10678 2.988010 TGTCATGCTTAGCTAGGTGG 57.012 50.000 5.60 0.00 0.00 4.61
3709 10679 4.034858 CACAATGTCATGCTTAGCTAGGTG 59.965 45.833 5.60 0.00 0.00 4.00
3710 10680 4.194640 CACAATGTCATGCTTAGCTAGGT 58.805 43.478 5.60 0.00 0.00 3.08
3711 10681 3.562973 CCACAATGTCATGCTTAGCTAGG 59.437 47.826 5.60 0.00 0.00 3.02
3712 10682 4.445453 TCCACAATGTCATGCTTAGCTAG 58.555 43.478 5.60 0.00 0.00 3.42
3713 10683 4.445453 CTCCACAATGTCATGCTTAGCTA 58.555 43.478 5.60 0.00 0.00 3.32
3714 10684 3.276857 CTCCACAATGTCATGCTTAGCT 58.723 45.455 5.60 0.00 0.00 3.32
3715 10685 2.357009 CCTCCACAATGTCATGCTTAGC 59.643 50.000 0.00 0.00 0.00 3.09
3716 10686 3.376234 CACCTCCACAATGTCATGCTTAG 59.624 47.826 0.00 0.00 0.00 2.18
3717 10687 3.244875 ACACCTCCACAATGTCATGCTTA 60.245 43.478 0.00 0.00 0.00 3.09
3718 10688 2.165167 CACCTCCACAATGTCATGCTT 58.835 47.619 0.00 0.00 0.00 3.91
3719 10689 1.074405 ACACCTCCACAATGTCATGCT 59.926 47.619 0.00 0.00 0.00 3.79
3720 10690 1.470098 GACACCTCCACAATGTCATGC 59.530 52.381 0.00 0.00 41.94 4.06
3721 10691 2.781923 TGACACCTCCACAATGTCATG 58.218 47.619 2.28 0.00 45.89 3.07
3724 10694 2.154462 CCTTGACACCTCCACAATGTC 58.846 52.381 0.00 0.00 42.54 3.06
3725 10695 1.819305 GCCTTGACACCTCCACAATGT 60.819 52.381 0.00 0.00 0.00 2.71
3726 10696 0.883833 GCCTTGACACCTCCACAATG 59.116 55.000 0.00 0.00 0.00 2.82
3727 10697 0.478072 TGCCTTGACACCTCCACAAT 59.522 50.000 0.00 0.00 0.00 2.71
3728 10698 0.257328 TTGCCTTGACACCTCCACAA 59.743 50.000 0.00 0.00 0.00 3.33
3729 10699 0.257328 TTTGCCTTGACACCTCCACA 59.743 50.000 0.00 0.00 0.00 4.17
3730 10700 0.954452 CTTTGCCTTGACACCTCCAC 59.046 55.000 0.00 0.00 0.00 4.02
3731 10701 0.823356 GCTTTGCCTTGACACCTCCA 60.823 55.000 0.00 0.00 0.00 3.86
3732 10702 1.856265 CGCTTTGCCTTGACACCTCC 61.856 60.000 0.00 0.00 0.00 4.30
3733 10703 1.576421 CGCTTTGCCTTGACACCTC 59.424 57.895 0.00 0.00 0.00 3.85
3734 10704 2.555547 GCGCTTTGCCTTGACACCT 61.556 57.895 0.00 0.00 37.76 4.00
3735 10705 2.050077 GCGCTTTGCCTTGACACC 60.050 61.111 0.00 0.00 37.76 4.16
3744 10714 2.131183 CCTATCTACTCAGCGCTTTGC 58.869 52.381 7.50 0.00 46.98 3.68
3745 10715 3.717400 TCCTATCTACTCAGCGCTTTG 57.283 47.619 7.50 5.93 0.00 2.77
3746 10716 4.402793 TCTTTCCTATCTACTCAGCGCTTT 59.597 41.667 7.50 0.00 0.00 3.51
3747 10717 3.954904 TCTTTCCTATCTACTCAGCGCTT 59.045 43.478 7.50 0.00 0.00 4.68
3748 10718 3.556999 TCTTTCCTATCTACTCAGCGCT 58.443 45.455 2.64 2.64 0.00 5.92
3749 10719 3.992260 TCTTTCCTATCTACTCAGCGC 57.008 47.619 0.00 0.00 0.00 5.92
3750 10720 6.507900 TCAAATCTTTCCTATCTACTCAGCG 58.492 40.000 0.00 0.00 0.00 5.18
3751 10721 7.387397 CCATCAAATCTTTCCTATCTACTCAGC 59.613 40.741 0.00 0.00 0.00 4.26
3752 10722 8.646004 TCCATCAAATCTTTCCTATCTACTCAG 58.354 37.037 0.00 0.00 0.00 3.35
3753 10723 8.553085 TCCATCAAATCTTTCCTATCTACTCA 57.447 34.615 0.00 0.00 0.00 3.41
3754 10724 9.651913 GATCCATCAAATCTTTCCTATCTACTC 57.348 37.037 0.00 0.00 0.00 2.59
3755 10725 9.163894 TGATCCATCAAATCTTTCCTATCTACT 57.836 33.333 0.00 0.00 33.08 2.57
3756 10726 9.434420 CTGATCCATCAAATCTTTCCTATCTAC 57.566 37.037 0.00 0.00 36.18 2.59
3757 10727 9.163894 ACTGATCCATCAAATCTTTCCTATCTA 57.836 33.333 0.00 0.00 36.18 1.98
3758 10728 7.937942 CACTGATCCATCAAATCTTTCCTATCT 59.062 37.037 0.00 0.00 36.18 1.98
3759 10729 7.935755 TCACTGATCCATCAAATCTTTCCTATC 59.064 37.037 0.00 0.00 36.18 2.08
3760 10730 7.809238 TCACTGATCCATCAAATCTTTCCTAT 58.191 34.615 0.00 0.00 36.18 2.57
3761 10731 7.092712 ACTCACTGATCCATCAAATCTTTCCTA 60.093 37.037 0.00 0.00 36.18 2.94
3762 10732 6.070951 TCACTGATCCATCAAATCTTTCCT 57.929 37.500 0.00 0.00 36.18 3.36
3763 10733 5.884792 ACTCACTGATCCATCAAATCTTTCC 59.115 40.000 0.00 0.00 36.18 3.13
3764 10734 6.998968 ACTCACTGATCCATCAAATCTTTC 57.001 37.500 0.00 0.00 36.18 2.62
3765 10735 7.052873 CCTACTCACTGATCCATCAAATCTTT 58.947 38.462 0.00 0.00 36.18 2.52
3766 10736 6.157645 ACCTACTCACTGATCCATCAAATCTT 59.842 38.462 0.00 0.00 36.18 2.40
3767 10737 5.664908 ACCTACTCACTGATCCATCAAATCT 59.335 40.000 0.00 0.00 36.18 2.40
3768 10738 5.923204 ACCTACTCACTGATCCATCAAATC 58.077 41.667 0.00 0.00 36.18 2.17
3769 10739 5.965033 ACCTACTCACTGATCCATCAAAT 57.035 39.130 0.00 0.00 36.18 2.32
3770 10740 6.841229 AGATACCTACTCACTGATCCATCAAA 59.159 38.462 0.00 0.00 36.18 2.69
3771 10741 6.377080 AGATACCTACTCACTGATCCATCAA 58.623 40.000 0.00 0.00 36.18 2.57
3772 10742 5.958321 AGATACCTACTCACTGATCCATCA 58.042 41.667 0.00 0.00 35.16 3.07
3773 10743 7.120579 CACTAGATACCTACTCACTGATCCATC 59.879 44.444 0.00 0.00 0.00 3.51
3774 10744 6.945435 CACTAGATACCTACTCACTGATCCAT 59.055 42.308 0.00 0.00 0.00 3.41
3775 10745 6.101296 TCACTAGATACCTACTCACTGATCCA 59.899 42.308 0.00 0.00 0.00 3.41
3776 10746 6.535540 TCACTAGATACCTACTCACTGATCC 58.464 44.000 0.00 0.00 0.00 3.36
3777 10747 8.511321 CATTCACTAGATACCTACTCACTGATC 58.489 40.741 0.00 0.00 0.00 2.92
3778 10748 8.001875 ACATTCACTAGATACCTACTCACTGAT 58.998 37.037 0.00 0.00 0.00 2.90
3779 10749 7.283354 CACATTCACTAGATACCTACTCACTGA 59.717 40.741 0.00 0.00 0.00 3.41
3780 10750 7.421599 CACATTCACTAGATACCTACTCACTG 58.578 42.308 0.00 0.00 0.00 3.66
3781 10751 6.547880 CCACATTCACTAGATACCTACTCACT 59.452 42.308 0.00 0.00 0.00 3.41
3782 10752 6.546403 TCCACATTCACTAGATACCTACTCAC 59.454 42.308 0.00 0.00 0.00 3.51
3783 10753 6.546403 GTCCACATTCACTAGATACCTACTCA 59.454 42.308 0.00 0.00 0.00 3.41
3784 10754 6.773685 AGTCCACATTCACTAGATACCTACTC 59.226 42.308 0.00 0.00 0.00 2.59
3785 10755 6.674573 AGTCCACATTCACTAGATACCTACT 58.325 40.000 0.00 0.00 0.00 2.57
3786 10756 6.963083 AGTCCACATTCACTAGATACCTAC 57.037 41.667 0.00 0.00 0.00 3.18
3787 10757 7.973048 AAAGTCCACATTCACTAGATACCTA 57.027 36.000 0.00 0.00 0.00 3.08
3788 10758 6.875972 AAAGTCCACATTCACTAGATACCT 57.124 37.500 0.00 0.00 0.00 3.08
3789 10759 6.255887 CGAAAAGTCCACATTCACTAGATACC 59.744 42.308 0.00 0.00 0.00 2.73
3790 10760 6.812160 ACGAAAAGTCCACATTCACTAGATAC 59.188 38.462 0.00 0.00 0.00 2.24
3791 10761 6.811665 CACGAAAAGTCCACATTCACTAGATA 59.188 38.462 0.00 0.00 0.00 1.98
3792 10762 5.639506 CACGAAAAGTCCACATTCACTAGAT 59.360 40.000 0.00 0.00 0.00 1.98
3793 10763 4.988540 CACGAAAAGTCCACATTCACTAGA 59.011 41.667 0.00 0.00 0.00 2.43
3794 10764 4.988540 TCACGAAAAGTCCACATTCACTAG 59.011 41.667 0.00 0.00 0.00 2.57
3795 10765 4.748102 GTCACGAAAAGTCCACATTCACTA 59.252 41.667 0.00 0.00 0.00 2.74
3796 10766 3.560068 GTCACGAAAAGTCCACATTCACT 59.440 43.478 0.00 0.00 0.00 3.41
3797 10767 3.311322 TGTCACGAAAAGTCCACATTCAC 59.689 43.478 0.00 0.00 0.00 3.18
3798 10768 3.536570 TGTCACGAAAAGTCCACATTCA 58.463 40.909 0.00 0.00 0.00 2.57
3799 10769 3.607078 GCTGTCACGAAAAGTCCACATTC 60.607 47.826 0.00 0.00 0.00 2.67
3800 10770 2.290641 GCTGTCACGAAAAGTCCACATT 59.709 45.455 0.00 0.00 0.00 2.71
3801 10771 1.873591 GCTGTCACGAAAAGTCCACAT 59.126 47.619 0.00 0.00 0.00 3.21
3802 10772 1.295792 GCTGTCACGAAAAGTCCACA 58.704 50.000 0.00 0.00 0.00 4.17
3803 10773 0.586802 GGCTGTCACGAAAAGTCCAC 59.413 55.000 0.00 0.00 0.00 4.02
3804 10774 0.534203 GGGCTGTCACGAAAAGTCCA 60.534 55.000 0.00 0.00 35.68 4.02
3805 10775 1.566018 CGGGCTGTCACGAAAAGTCC 61.566 60.000 0.00 0.00 32.10 3.85
3806 10776 1.566018 CCGGGCTGTCACGAAAAGTC 61.566 60.000 0.00 0.00 0.00 3.01
3807 10777 1.597027 CCGGGCTGTCACGAAAAGT 60.597 57.895 0.00 0.00 0.00 2.66
3808 10778 1.291877 CTCCGGGCTGTCACGAAAAG 61.292 60.000 0.00 0.00 0.00 2.27
3809 10779 1.301401 CTCCGGGCTGTCACGAAAA 60.301 57.895 0.00 0.00 0.00 2.29
3810 10780 2.342279 CTCCGGGCTGTCACGAAA 59.658 61.111 0.00 0.00 0.00 3.46
3811 10781 4.373116 GCTCCGGGCTGTCACGAA 62.373 66.667 0.00 0.00 38.06 3.85
3841 10811 0.869068 TAACGTGTTTGCCCATGTCG 59.131 50.000 0.00 0.00 33.52 4.35
3843 10813 2.952978 TCTTTAACGTGTTTGCCCATGT 59.047 40.909 0.00 0.00 36.14 3.21
3850 10820 7.359262 TCACTCCATATCTTTAACGTGTTTG 57.641 36.000 0.00 0.00 0.00 2.93
3851 10821 6.594159 CCTCACTCCATATCTTTAACGTGTTT 59.406 38.462 0.00 0.00 0.00 2.83
3867 10837 1.144708 TGAAAACATGCCCTCACTCCA 59.855 47.619 0.00 0.00 0.00 3.86
3879 10849 7.713734 ATCTCTTGTGGATCATTGAAAACAT 57.286 32.000 0.00 0.00 0.00 2.71
3905 10875 1.106351 TGGTGTGGTGCGCTTCAATT 61.106 50.000 9.73 0.00 0.00 2.32
3921 10891 8.825667 AAATTTAAATGAAATGCTTACGTGGT 57.174 26.923 0.39 0.00 37.82 4.16
3996 10966 6.827727 TCCCTAAGCTTAATCCATACTTGTC 58.172 40.000 7.74 0.00 0.00 3.18
3998 10968 7.453393 TGATCCCTAAGCTTAATCCATACTTG 58.547 38.462 7.74 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.