Multiple sequence alignment - TraesCS5B01G040800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G040800 chr5B 100.000 4118 0 0 1425 5542 45234720 45238837 0.000000e+00 7605.0
1 TraesCS5B01G040800 chr5B 100.000 1149 0 0 1 1149 45233296 45234444 0.000000e+00 2122.0
2 TraesCS5B01G040800 chr5B 99.807 518 1 0 1 518 45270150 45270667 0.000000e+00 952.0
3 TraesCS5B01G040800 chr5B 82.988 482 42 21 4067 4545 45206838 45207282 3.110000e-107 399.0
4 TraesCS5B01G040800 chr5B 87.356 87 7 1 1458 1540 45204167 45204253 4.570000e-16 97.1
5 TraesCS5B01G040800 chr5D 91.613 930 56 13 239 1147 45205154 45206082 0.000000e+00 1266.0
6 TraesCS5B01G040800 chr5D 87.774 957 85 14 4354 5301 45209218 45210151 0.000000e+00 1090.0
7 TraesCS5B01G040800 chr5D 78.240 1227 169 54 2772 3961 45207748 45208913 0.000000e+00 697.0
8 TraesCS5B01G040800 chr5D 86.709 474 52 8 1457 1920 45206089 45206561 2.960000e-142 516.0
9 TraesCS5B01G040800 chr5D 83.195 482 37 21 4067 4545 45174331 45174771 8.650000e-108 401.0
10 TraesCS5B01G040800 chr5D 77.954 567 68 29 2092 2624 45207074 45207617 9.020000e-78 302.0
11 TraesCS5B01G040800 chr5D 77.708 480 71 26 2437 2892 45172784 45173251 1.530000e-65 261.0
12 TraesCS5B01G040800 chr5D 93.125 160 11 0 4097 4256 45208990 45209149 9.280000e-58 235.0
13 TraesCS5B01G040800 chr5D 80.755 265 39 8 3137 3392 45173589 45173850 4.380000e-46 196.0
14 TraesCS5B01G040800 chr5D 93.750 112 7 0 5287 5398 45210170 45210281 9.550000e-38 169.0
15 TraesCS5B01G040800 chr5D 84.211 95 11 2 1450 1540 45171400 45171494 7.650000e-14 89.8
16 TraesCS5B01G040800 chr5D 77.439 164 22 8 1922 2083 45206594 45206744 3.560000e-12 84.2
17 TraesCS5B01G040800 chr5A 86.681 916 97 11 4354 5261 36015268 36016166 0.000000e+00 992.0
18 TraesCS5B01G040800 chr5A 87.634 558 55 8 228 776 36011086 36011638 2.180000e-178 636.0
19 TraesCS5B01G040800 chr5A 79.608 868 95 43 3131 3961 36014141 36014963 1.050000e-151 547.0
20 TraesCS5B01G040800 chr5A 86.804 485 58 6 1440 1920 36012020 36012502 2.270000e-148 536.0
21 TraesCS5B01G040800 chr5A 93.913 345 21 0 803 1147 36011637 36011981 6.360000e-144 521.0
22 TraesCS5B01G040800 chr5A 85.124 484 45 14 4067 4545 35825313 35825774 2.340000e-128 470.0
23 TraesCS5B01G040800 chr5A 84.916 358 42 11 2276 2626 36013412 36013764 8.830000e-93 351.0
24 TraesCS5B01G040800 chr5A 92.500 160 12 0 4097 4256 36015040 36015199 4.320000e-56 230.0
25 TraesCS5B01G040800 chr5A 83.886 211 26 4 1997 2206 35823230 35823433 1.580000e-45 195.0
26 TraesCS5B01G040800 chr5A 85.093 161 19 4 551 709 36010826 36010983 5.750000e-35 159.0
27 TraesCS5B01G040800 chr5A 91.111 90 4 3 1049 1136 35822170 35822257 9.750000e-23 119.0
28 TraesCS5B01G040800 chr5A 86.000 100 9 2 1445 1540 35822521 35822619 9.820000e-18 102.0
29 TraesCS5B01G040800 chr5A 83.158 95 11 3 1443 1533 35820245 35820338 1.280000e-11 82.4
30 TraesCS5B01G040800 chr2B 98.734 158 2 0 1 158 11526927 11527084 1.180000e-71 281.0
31 TraesCS5B01G040800 chr2B 96.894 161 5 0 1 161 638901608 638901768 2.540000e-68 270.0
32 TraesCS5B01G040800 chr4A 91.772 158 13 0 1 158 738026395 738026238 2.600000e-53 220.0
33 TraesCS5B01G040800 chr3B 91.772 158 7 1 1 158 547600759 547600910 1.210000e-51 215.0
34 TraesCS5B01G040800 chr3B 84.940 166 16 4 1 160 632923166 632923004 5.750000e-35 159.0
35 TraesCS5B01G040800 chr4D 90.476 147 14 0 1 147 506423542 506423396 1.580000e-45 195.0
36 TraesCS5B01G040800 chr1B 100.000 40 0 0 184 223 635357329 635357368 2.140000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G040800 chr5B 45233296 45238837 5541 False 4863.50 7605 100.000000 1 5542 2 chr5B.!!$F3 5541
1 TraesCS5B01G040800 chr5B 45270150 45270667 517 False 952.00 952 99.807000 1 518 1 chr5B.!!$F1 517
2 TraesCS5B01G040800 chr5B 45204167 45207282 3115 False 248.05 399 85.172000 1458 4545 2 chr5B.!!$F2 3087
3 TraesCS5B01G040800 chr5D 45205154 45210281 5127 False 544.90 1266 85.825500 239 5398 8 chr5D.!!$F2 5159
4 TraesCS5B01G040800 chr5D 45171400 45174771 3371 False 236.95 401 81.467250 1450 4545 4 chr5D.!!$F1 3095
5 TraesCS5B01G040800 chr5A 36010826 36016166 5340 False 496.50 992 87.143625 228 5261 8 chr5A.!!$F2 5033

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
158 159 0.980231 GGAGGTCAGGACAGCCATCT 60.980 60.0 1.41 0.00 36.29 2.90 F
1097 1149 0.109272 ATCGGCGTCATAGGTATGCG 60.109 55.0 6.85 8.52 36.78 4.73 F
1993 2112 0.106769 TTGTGCAACTGGAGGCAAGA 60.107 50.0 0.00 0.00 42.45 3.02 F
2481 4039 0.179004 TGGCAGTTTTGGACATCGGT 60.179 50.0 0.00 0.00 0.00 4.69 F
3940 5811 0.320421 ATTACGTGTGCGAGTTGGCT 60.320 50.0 0.00 0.00 42.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1867 1953 0.099968 CGACGGCGTAGATGAGGAAA 59.900 55.0 14.74 0.00 0.00 3.13 R
2743 4328 0.107361 TCGCACACCCTATCTCGAGA 60.107 55.0 19.19 19.19 0.00 4.04 R
3963 5847 0.467290 ACCATGGCCACGAAAACAGT 60.467 50.0 8.16 0.00 0.00 3.55 R
4077 5967 0.032952 GTGCAGTACCACGGTTCTGA 59.967 55.0 22.67 8.40 43.26 3.27 R
4856 6750 0.103208 GGAAGCGAGTCGATCCATGT 59.897 55.0 24.64 2.52 35.50 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 159 0.980231 GGAGGTCAGGACAGCCATCT 60.980 60.000 1.41 0.00 36.29 2.90
227 228 2.906389 TCACCTACATTTGAGCTCACCT 59.094 45.455 18.03 3.30 0.00 4.00
228 229 4.093743 TCACCTACATTTGAGCTCACCTA 58.906 43.478 18.03 5.30 0.00 3.08
229 230 4.081642 TCACCTACATTTGAGCTCACCTAC 60.082 45.833 18.03 0.00 0.00 3.18
230 231 3.119101 ACCTACATTTGAGCTCACCTACG 60.119 47.826 18.03 6.09 0.00 3.51
518 556 9.817365 GTATCTATAAATGCACACAAGCTTATG 57.183 33.333 2.42 2.42 34.99 1.90
560 598 3.259064 GCATGTGCTGAAATGATTTGCT 58.741 40.909 0.00 0.00 38.21 3.91
600 639 5.471456 TCAGGAAATGCTCTCAAGAAAGAAC 59.529 40.000 0.00 0.00 0.00 3.01
605 644 7.168804 GGAAATGCTCTCAAGAAAGAACAAAAG 59.831 37.037 0.00 0.00 0.00 2.27
629 673 1.153823 CAGGGACGACCGCAAGTAG 60.154 63.158 0.00 0.00 46.96 2.57
635 679 1.918609 GACGACCGCAAGTAGATCAAC 59.081 52.381 0.00 0.00 0.00 3.18
687 731 8.447200 TCAAATGGGGATTCATGATGATAACTA 58.553 33.333 0.00 0.00 0.00 2.24
729 773 3.942130 ATACCTGCAAGAAAACAAGGC 57.058 42.857 0.00 0.00 34.07 4.35
784 828 1.227674 CGGATCTGCAAGGTAGGCC 60.228 63.158 0.00 0.00 0.00 5.19
804 848 1.707239 GGTGGCGTTCGACACAACAA 61.707 55.000 28.01 0.00 45.39 2.83
817 861 9.257865 GTTCGACACAACAACAACATATTATAC 57.742 33.333 0.00 0.00 0.00 1.47
914 966 4.819761 GCGCAGGCTCCATCGTGA 62.820 66.667 0.30 0.00 35.83 4.35
950 1002 5.057149 GCATTAAGTACGATGGATGTCCTT 58.943 41.667 0.09 0.00 36.82 3.36
959 1011 3.557595 CGATGGATGTCCTTCTAGTTTGC 59.442 47.826 11.70 0.00 37.86 3.68
977 1029 5.122396 AGTTTGCAGATCATCGTCCTTTAAC 59.878 40.000 0.00 0.00 0.00 2.01
990 1042 2.490903 TCCTTTAACTTCGACCTCCTCG 59.509 50.000 0.00 0.00 44.44 4.63
1038 1090 1.063654 TCCCTTCCACCGGGTTTCTT 61.064 55.000 6.32 0.00 42.56 2.52
1097 1149 0.109272 ATCGGCGTCATAGGTATGCG 60.109 55.000 6.85 8.52 36.78 4.73
1102 1154 1.070821 CGTCATAGGTATGCGCATGG 58.929 55.000 32.48 14.11 33.76 3.66
1108 1160 6.944690 TCATAGGTATGCGCATGGATGCTC 62.945 50.000 32.48 12.95 40.66 4.26
1147 1205 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
1475 1533 7.545265 TCTTTCTTTCTTTGTTGTTTGACCATG 59.455 33.333 0.00 0.00 0.00 3.66
1487 1549 2.205022 TGACCATGGAGCTTCTTTGG 57.795 50.000 21.47 11.75 0.00 3.28
1542 1604 2.832129 TCGTTTCTCCCATGTAAGAGCT 59.168 45.455 0.00 0.00 0.00 4.09
1543 1605 4.021229 TCGTTTCTCCCATGTAAGAGCTA 58.979 43.478 0.00 0.00 0.00 3.32
1561 1638 2.977829 GCTACGATCATGCATGCATTTG 59.022 45.455 30.32 21.66 33.90 2.32
1588 1665 9.701355 CAGAAGCATTTAATTCGTTTTTGTTTT 57.299 25.926 0.00 0.00 0.00 2.43
1613 1690 2.423892 CGTCTTTTCTCGAGGAGGATCA 59.576 50.000 13.56 0.00 36.25 2.92
1634 1719 0.894835 CCCCCGGATTTTGTTTCTGG 59.105 55.000 0.73 0.00 39.05 3.86
1643 1728 5.596845 GGATTTTGTTTCTGGTGTTGCTTA 58.403 37.500 0.00 0.00 0.00 3.09
1653 1738 1.545582 GGTGTTGCTTACATGCATGGT 59.454 47.619 29.41 17.33 42.96 3.55
1665 1750 5.465532 ACATGCATGGTTGATTGTTGTTA 57.534 34.783 29.41 0.00 0.00 2.41
1666 1751 5.472148 ACATGCATGGTTGATTGTTGTTAG 58.528 37.500 29.41 0.00 0.00 2.34
1705 1791 0.181350 GCCCGACATTCTGGAGGATT 59.819 55.000 0.00 0.00 0.00 3.01
1756 1842 2.585247 GCGCCATACGTCCTCACC 60.585 66.667 0.00 0.00 46.11 4.02
1786 1872 4.219115 ACACACTGCTATGGCTCTACTAT 58.781 43.478 1.68 0.00 39.59 2.12
1804 1890 4.115199 GGCCTCACCAAGCCCGAT 62.115 66.667 0.00 0.00 43.76 4.18
1837 1923 1.300620 CACTGTCAACGGCTTCGGA 60.301 57.895 0.00 0.00 38.38 4.55
1863 1949 4.216472 TGTCATGGAGACTATCTACATCGC 59.784 45.833 0.27 0.00 44.53 4.58
1867 1953 2.226912 GGAGACTATCTACATCGCGCTT 59.773 50.000 5.56 0.00 0.00 4.68
1874 1960 1.203758 TCTACATCGCGCTTTTCCTCA 59.796 47.619 5.56 0.00 0.00 3.86
1884 1970 1.739371 GCTTTTCCTCATCTACGCCGT 60.739 52.381 0.00 0.00 0.00 5.68
1934 2051 3.743911 CACACGGTGCAGTCTACAAATAA 59.256 43.478 8.30 0.00 0.00 1.40
1978 2097 6.449698 ACAGCAATTTACTCCTGAATTTGTG 58.550 36.000 0.00 0.00 0.00 3.33
1980 2099 5.010922 AGCAATTTACTCCTGAATTTGTGCA 59.989 36.000 0.00 0.00 0.00 4.57
1981 2100 5.695816 GCAATTTACTCCTGAATTTGTGCAA 59.304 36.000 0.00 0.00 0.00 4.08
1982 2101 6.346838 GCAATTTACTCCTGAATTTGTGCAAC 60.347 38.462 0.00 0.00 37.35 4.17
1983 2102 6.655078 ATTTACTCCTGAATTTGTGCAACT 57.345 33.333 0.00 0.00 38.04 3.16
1984 2103 3.996150 ACTCCTGAATTTGTGCAACTG 57.004 42.857 0.00 0.00 38.04 3.16
1985 2104 2.624838 ACTCCTGAATTTGTGCAACTGG 59.375 45.455 0.00 0.00 38.04 4.00
1986 2105 2.886523 CTCCTGAATTTGTGCAACTGGA 59.113 45.455 0.00 0.00 38.04 3.86
1987 2106 2.886523 TCCTGAATTTGTGCAACTGGAG 59.113 45.455 0.00 0.00 38.04 3.86
1988 2107 2.029649 CCTGAATTTGTGCAACTGGAGG 60.030 50.000 0.00 0.00 38.04 4.30
1989 2108 1.340889 TGAATTTGTGCAACTGGAGGC 59.659 47.619 0.00 0.00 38.04 4.70
1992 2111 0.746063 TTTGTGCAACTGGAGGCAAG 59.254 50.000 0.00 0.00 42.45 4.01
1993 2112 0.106769 TTGTGCAACTGGAGGCAAGA 60.107 50.000 0.00 0.00 42.45 3.02
1994 2113 0.535780 TGTGCAACTGGAGGCAAGAG 60.536 55.000 0.00 0.00 42.45 2.85
1995 2114 0.536006 GTGCAACTGGAGGCAAGAGT 60.536 55.000 0.00 0.00 42.45 3.24
1996 2115 1.055849 TGCAACTGGAGGCAAGAGTA 58.944 50.000 0.00 0.00 37.03 2.59
1997 2116 1.270839 TGCAACTGGAGGCAAGAGTAC 60.271 52.381 0.00 0.00 37.03 2.73
1998 2117 1.270839 GCAACTGGAGGCAAGAGTACA 60.271 52.381 0.00 0.00 0.00 2.90
1999 2118 2.616510 GCAACTGGAGGCAAGAGTACAT 60.617 50.000 0.00 0.00 0.00 2.29
2012 2291 5.415701 GCAAGAGTACATTTTCCCATTGAGA 59.584 40.000 0.00 0.00 0.00 3.27
2021 2300 8.738645 ACATTTTCCCATTGAGAGAACTATAC 57.261 34.615 0.00 0.00 0.00 1.47
2072 2360 4.675190 CTCGTCTTGACCGAGTTAGTTA 57.325 45.455 1.87 0.00 45.09 2.24
2121 2734 7.611467 AGAATGGTGCTCAAGTAATTTCATACA 59.389 33.333 0.00 0.00 0.00 2.29
2206 3564 4.280436 TGAGTCGCATTCTTTCCCTTTA 57.720 40.909 0.00 0.00 0.00 1.85
2207 3565 4.647611 TGAGTCGCATTCTTTCCCTTTAA 58.352 39.130 0.00 0.00 0.00 1.52
2209 3567 5.710099 TGAGTCGCATTCTTTCCCTTTAATT 59.290 36.000 0.00 0.00 0.00 1.40
2211 3569 5.710099 AGTCGCATTCTTTCCCTTTAATTCA 59.290 36.000 0.00 0.00 0.00 2.57
2212 3570 6.378280 AGTCGCATTCTTTCCCTTTAATTCAT 59.622 34.615 0.00 0.00 0.00 2.57
2213 3571 7.556275 AGTCGCATTCTTTCCCTTTAATTCATA 59.444 33.333 0.00 0.00 0.00 2.15
2214 3572 7.644157 GTCGCATTCTTTCCCTTTAATTCATAC 59.356 37.037 0.00 0.00 0.00 2.39
2215 3573 6.918022 CGCATTCTTTCCCTTTAATTCATACC 59.082 38.462 0.00 0.00 0.00 2.73
2217 3575 7.706607 GCATTCTTTCCCTTTAATTCATACCAC 59.293 37.037 0.00 0.00 0.00 4.16
2218 3576 8.971073 CATTCTTTCCCTTTAATTCATACCACT 58.029 33.333 0.00 0.00 0.00 4.00
2225 3583 9.196139 TCCCTTTAATTCATACCACTTATTTGG 57.804 33.333 0.00 0.00 43.04 3.28
2251 3609 6.021596 GTCCTATTTCAGTTGCGTTAATGTG 58.978 40.000 0.00 0.00 0.00 3.21
2256 3614 5.950758 TTCAGTTGCGTTAATGTGGTTAT 57.049 34.783 0.00 0.00 0.00 1.89
2258 3618 7.436430 TTCAGTTGCGTTAATGTGGTTATTA 57.564 32.000 0.00 0.00 0.00 0.98
2262 3622 8.582930 CAGTTGCGTTAATGTGGTTATTATTTG 58.417 33.333 0.00 0.00 0.00 2.32
2263 3623 8.516234 AGTTGCGTTAATGTGGTTATTATTTGA 58.484 29.630 0.00 0.00 0.00 2.69
2264 3624 8.580431 GTTGCGTTAATGTGGTTATTATTTGAC 58.420 33.333 0.00 0.00 0.00 3.18
2287 3843 9.924650 TGACCATTTCTACTCTAAAAGTACTTC 57.075 33.333 8.95 0.00 39.55 3.01
2325 3882 9.743057 TTTTGGCAATTTTATGATATAGTTCGG 57.257 29.630 0.00 0.00 0.00 4.30
2328 3885 7.094805 TGGCAATTTTATGATATAGTTCGGCTC 60.095 37.037 0.00 0.00 0.00 4.70
2335 3892 4.945246 TGATATAGTTCGGCTCTGGAAAC 58.055 43.478 0.00 0.00 0.00 2.78
2336 3893 4.404394 TGATATAGTTCGGCTCTGGAAACA 59.596 41.667 0.00 0.00 39.59 2.83
2391 3948 1.089920 GAAGATCATGTGGCAAGCGT 58.910 50.000 0.00 0.00 0.00 5.07
2398 3955 2.009051 CATGTGGCAAGCGTAATCAGA 58.991 47.619 0.00 0.00 0.00 3.27
2408 3965 5.220739 GCAAGCGTAATCAGACATCTCAAAT 60.221 40.000 0.00 0.00 0.00 2.32
2412 3969 7.820648 AGCGTAATCAGACATCTCAAATTTTT 58.179 30.769 0.00 0.00 0.00 1.94
2413 3970 7.752239 AGCGTAATCAGACATCTCAAATTTTTG 59.248 33.333 0.00 0.00 39.48 2.44
2451 4009 4.957327 TGTTGCCCTTTACAGGTTAAAACT 59.043 37.500 0.00 0.00 38.79 2.66
2454 4012 3.610821 GCCCTTTACAGGTTAAAACTGCG 60.611 47.826 8.02 0.00 38.79 5.18
2481 4039 0.179004 TGGCAGTTTTGGACATCGGT 60.179 50.000 0.00 0.00 0.00 4.69
2523 4081 0.887247 CCACAACATTCGCCATTGGA 59.113 50.000 6.95 0.00 0.00 3.53
2599 4157 1.079621 ATGTACGGGTCCCCACTCA 59.920 57.895 1.00 0.00 35.37 3.41
2626 4184 3.748645 TGGTAAGGCCATTACACCAAT 57.251 42.857 19.97 0.00 44.81 3.16
2627 4185 4.054359 TGGTAAGGCCATTACACCAATT 57.946 40.909 19.97 0.74 44.81 2.32
2628 4186 3.766591 TGGTAAGGCCATTACACCAATTG 59.233 43.478 19.97 0.00 44.81 2.32
2629 4187 3.132111 GGTAAGGCCATTACACCAATTGG 59.868 47.826 23.31 23.31 44.81 3.16
2630 4188 5.358840 GGTAAGGCCATTACACCAATTGGT 61.359 45.833 24.86 24.86 44.81 3.67
2631 4189 7.126242 GGTAAGGCCATTACACCAATTGGTC 62.126 48.000 27.56 13.87 44.81 4.02
2645 4224 5.782047 CCAATTGGTCATCTGTTTGCTTAA 58.218 37.500 16.90 0.00 0.00 1.85
2648 4227 6.655078 ATTGGTCATCTGTTTGCTTAACTT 57.345 33.333 4.36 0.00 37.64 2.66
2650 4229 6.072112 TGGTCATCTGTTTGCTTAACTTTC 57.928 37.500 4.36 0.00 37.64 2.62
2659 4238 9.398538 TCTGTTTGCTTAACTTTCTAGGTTTTA 57.601 29.630 0.00 0.00 37.64 1.52
2661 4240 9.959749 TGTTTGCTTAACTTTCTAGGTTTTATG 57.040 29.630 0.00 0.00 37.64 1.90
2720 4305 8.467402 TTTTATGCTTCTTTTTGTTGTTTCGA 57.533 26.923 0.00 0.00 0.00 3.71
2721 4306 5.949233 ATGCTTCTTTTTGTTGTTTCGAC 57.051 34.783 0.00 0.00 0.00 4.20
2722 4307 4.799678 TGCTTCTTTTTGTTGTTTCGACA 58.200 34.783 0.00 0.00 0.00 4.35
2723 4308 5.223382 TGCTTCTTTTTGTTGTTTCGACAA 58.777 33.333 0.00 0.00 36.14 3.18
2727 4312 7.008810 GCTTCTTTTTGTTGTTTCGACAATGTA 59.991 33.333 3.82 0.00 37.55 2.29
2734 4319 5.351740 TGTTGTTTCGACAATGTAACTGACA 59.648 36.000 0.00 0.00 43.97 3.58
2735 4320 6.128254 TGTTGTTTCGACAATGTAACTGACAA 60.128 34.615 0.00 0.00 42.78 3.18
2743 4328 5.930135 ACAATGTAACTGACAAAGAGAGGT 58.070 37.500 0.00 0.00 42.78 3.85
2746 4331 5.455056 TGTAACTGACAAAGAGAGGTCTC 57.545 43.478 0.00 0.00 37.98 3.36
2760 4345 0.386113 GGTCTCGAGATAGGGTGTGC 59.614 60.000 19.90 1.64 0.00 4.57
2766 4351 2.953648 TCGAGATAGGGTGTGCGAAATA 59.046 45.455 0.00 0.00 0.00 1.40
2770 4355 3.704566 AGATAGGGTGTGCGAAATAGTGA 59.295 43.478 0.00 0.00 0.00 3.41
2774 4359 3.196901 AGGGTGTGCGAAATAGTGATACA 59.803 43.478 0.00 0.00 0.00 2.29
2782 4367 7.762159 TGTGCGAAATAGTGATACATAGACAAA 59.238 33.333 0.00 0.00 0.00 2.83
2813 4400 4.555747 CGCCCATACACGTAAATGAAAAAC 59.444 41.667 10.12 0.00 0.00 2.43
2820 4407 9.776451 CATACACGTAAATGAAAAACAATTGTG 57.224 29.630 12.82 0.00 0.00 3.33
2852 4488 7.552687 TGAATCCTATCAAATAACTCGCTTTGT 59.447 33.333 0.00 0.00 34.66 2.83
2855 4491 8.420374 TCCTATCAAATAACTCGCTTTGTAAG 57.580 34.615 0.00 0.00 34.66 2.34
2867 4507 4.081642 TCGCTTTGTAAGAATGCTAGGAGT 60.082 41.667 0.00 0.00 0.00 3.85
2868 4508 4.033358 CGCTTTGTAAGAATGCTAGGAGTG 59.967 45.833 0.00 0.00 0.00 3.51
2906 4562 1.404035 GGAGTATCGGGCGCAATTTTT 59.596 47.619 10.83 0.00 34.37 1.94
2911 4567 0.806241 TCGGGCGCAATTTTTCCTAC 59.194 50.000 10.83 0.00 0.00 3.18
2919 4575 6.460399 GGGCGCAATTTTTCCTACATATAACA 60.460 38.462 10.83 0.00 0.00 2.41
2965 4621 7.129109 TGAAGTTGTATAGTACTGCAAAAGC 57.871 36.000 5.39 2.44 26.89 3.51
2976 4704 6.942976 AGTACTGCAAAAGCTATACCACTAA 58.057 36.000 0.00 0.00 0.00 2.24
2978 4706 6.743575 ACTGCAAAAGCTATACCACTAAAG 57.256 37.500 0.00 0.00 0.00 1.85
2985 4713 9.817809 CAAAAGCTATACCACTAAAGACATCTA 57.182 33.333 0.00 0.00 0.00 1.98
2988 4716 8.356000 AGCTATACCACTAAAGACATCTATCC 57.644 38.462 0.00 0.00 0.00 2.59
2993 4721 6.595682 ACCACTAAAGACATCTATCCAATGG 58.404 40.000 0.00 0.00 0.00 3.16
2994 4722 5.471456 CCACTAAAGACATCTATCCAATGGC 59.529 44.000 0.00 0.00 31.92 4.40
3001 4744 7.934855 AGACATCTATCCAATGGCATATTTC 57.065 36.000 0.00 0.00 34.39 2.17
3002 4745 6.888632 AGACATCTATCCAATGGCATATTTCC 59.111 38.462 0.00 0.00 34.39 3.13
3006 4749 3.011566 TCCAATGGCATATTTCCGTGT 57.988 42.857 0.00 0.00 0.00 4.49
3007 4750 3.360867 TCCAATGGCATATTTCCGTGTT 58.639 40.909 0.00 0.00 0.00 3.32
3008 4751 3.130164 TCCAATGGCATATTTCCGTGTTG 59.870 43.478 0.00 0.00 0.00 3.33
3019 4762 9.594038 GCATATTTCCGTGTTGTATAACTTATG 57.406 33.333 3.89 2.52 37.68 1.90
3055 4798 6.200097 ACAAAATTTGTGATCAAAGTTACGCC 59.800 34.615 10.91 0.00 46.33 5.68
3060 4803 2.550606 GTGATCAAAGTTACGCCCACAA 59.449 45.455 0.00 0.00 0.00 3.33
3077 4821 4.806640 CACAATTTGAGGTGGCCTTAAT 57.193 40.909 3.32 0.00 31.76 1.40
3115 4923 3.009805 GGAGGGAGGGTAGCAAAAAGTAA 59.990 47.826 0.00 0.00 0.00 2.24
3117 4925 4.663334 AGGGAGGGTAGCAAAAAGTAAAG 58.337 43.478 0.00 0.00 0.00 1.85
3121 4929 6.185511 GGAGGGTAGCAAAAAGTAAAGGTAT 58.814 40.000 0.00 0.00 0.00 2.73
3128 4936 9.556030 GTAGCAAAAAGTAAAGGTATTGATGAC 57.444 33.333 0.00 0.00 0.00 3.06
3133 4941 6.636454 AAGTAAAGGTATTGATGACCCTCA 57.364 37.500 0.00 0.00 37.73 3.86
3134 4942 6.636454 AGTAAAGGTATTGATGACCCTCAA 57.364 37.500 0.00 0.00 39.35 3.02
3135 4943 7.213178 AGTAAAGGTATTGATGACCCTCAAT 57.787 36.000 4.85 4.85 45.44 2.57
3214 5024 9.466497 TCCTTGTTTCTATGCAATTAGATCTTT 57.534 29.630 0.00 0.00 0.00 2.52
3247 5057 5.189736 TGGCAAAGTACTACCAGATCATCTT 59.810 40.000 7.86 0.00 0.00 2.40
3249 5059 6.037610 GGCAAAGTACTACCAGATCATCTTTG 59.962 42.308 0.00 0.00 41.52 2.77
3284 5109 6.447162 ACATGTATACATACACATCGTGAGG 58.553 40.000 17.86 4.07 45.11 3.86
3294 5119 0.379669 CATCGTGAGGCAGCCATTTC 59.620 55.000 15.80 2.78 0.00 2.17
3313 5142 0.725117 CGTTGGGATACGCAAGGTTC 59.275 55.000 11.17 0.00 46.39 3.62
3322 5151 1.597027 CGCAAGGTTCCGGTCAAGT 60.597 57.895 0.00 0.00 0.00 3.16
3323 5152 1.164041 CGCAAGGTTCCGGTCAAGTT 61.164 55.000 0.00 0.00 0.00 2.66
3324 5153 1.874739 CGCAAGGTTCCGGTCAAGTTA 60.875 52.381 0.00 0.00 0.00 2.24
3334 5163 6.478016 GGTTCCGGTCAAGTTATATACAGTTC 59.522 42.308 0.00 0.00 0.00 3.01
3358 5187 6.212791 TCCCACTAGCTAACACTTTCTTGTAT 59.787 38.462 0.00 0.00 0.00 2.29
3361 5190 6.874134 CACTAGCTAACACTTTCTTGTATGGT 59.126 38.462 0.00 0.00 0.00 3.55
3417 5256 4.750098 GCTATACATATGCGTTGGTCAACT 59.250 41.667 1.58 0.00 39.08 3.16
3433 5282 7.701539 TGGTCAACTTATACATCTGCATTTT 57.298 32.000 0.00 0.00 0.00 1.82
3577 5429 4.201871 GCATGGATGGCATGTTGAATTTTG 60.202 41.667 3.81 0.00 32.93 2.44
3582 5434 6.817641 TGGATGGCATGTTGAATTTTGTATTC 59.182 34.615 3.81 0.00 0.00 1.75
3583 5435 6.258507 GGATGGCATGTTGAATTTTGTATTCC 59.741 38.462 3.81 0.00 0.00 3.01
3627 5481 1.606668 TGAGTTGTTTGATTGGACGCC 59.393 47.619 0.00 0.00 0.00 5.68
3628 5482 1.606668 GAGTTGTTTGATTGGACGCCA 59.393 47.619 0.00 0.00 0.00 5.69
3665 5530 2.949644 AGGAAACAGCCAACTAACACAC 59.050 45.455 0.00 0.00 0.00 3.82
3670 5535 2.076863 CAGCCAACTAACACACTAGCC 58.923 52.381 0.00 0.00 0.00 3.93
3691 5556 3.104470 CGGCTGATCGATCGATATCTTG 58.896 50.000 29.45 17.59 34.60 3.02
3700 5565 2.229675 TCGATATCTTGGTGCTGCAG 57.770 50.000 10.11 10.11 0.00 4.41
3701 5566 0.585357 CGATATCTTGGTGCTGCAGC 59.415 55.000 31.89 31.89 42.50 5.25
3713 5578 1.000274 TGCTGCAGCGTATCGTATCAT 60.000 47.619 32.11 0.00 45.83 2.45
3716 5581 2.403259 TGCAGCGTATCGTATCATTGG 58.597 47.619 0.00 0.00 0.00 3.16
3717 5582 1.726791 GCAGCGTATCGTATCATTGGG 59.273 52.381 0.00 0.00 0.00 4.12
3718 5583 2.337583 CAGCGTATCGTATCATTGGGG 58.662 52.381 0.00 0.00 0.00 4.96
3720 5585 2.832129 AGCGTATCGTATCATTGGGGAT 59.168 45.455 0.00 0.00 0.00 3.85
3721 5586 4.021229 AGCGTATCGTATCATTGGGGATA 58.979 43.478 0.00 0.00 0.00 2.59
3723 5588 5.128827 AGCGTATCGTATCATTGGGGATATT 59.871 40.000 0.00 0.00 32.72 1.28
3725 5590 6.238103 GCGTATCGTATCATTGGGGATATTTG 60.238 42.308 0.00 0.00 32.72 2.32
3726 5591 6.816640 CGTATCGTATCATTGGGGATATTTGT 59.183 38.462 0.00 0.00 32.72 2.83
3731 5596 9.581289 TCGTATCATTGGGGATATTTGTTAATT 57.419 29.630 0.00 0.00 32.72 1.40
3816 5681 6.573434 ACGTGCTGATCACTATCTAAATCAA 58.427 36.000 0.00 0.00 43.46 2.57
3818 5683 7.712639 ACGTGCTGATCACTATCTAAATCAATT 59.287 33.333 0.00 0.00 43.46 2.32
3821 5686 9.269453 TGCTGATCACTATCTAAATCAATTCAG 57.731 33.333 0.00 0.00 32.93 3.02
3839 5704 6.949352 ATTCAGAACAAGTCAGAAACATGT 57.051 33.333 0.00 0.00 41.38 3.21
3880 5745 5.029654 CGCGTGAATGAATGAATGAATGAA 58.970 37.500 0.00 0.00 0.00 2.57
3881 5746 5.684184 CGCGTGAATGAATGAATGAATGAAT 59.316 36.000 0.00 0.00 0.00 2.57
3882 5747 6.344702 CGCGTGAATGAATGAATGAATGAATG 60.345 38.462 0.00 0.00 0.00 2.67
3884 5749 7.197703 CGTGAATGAATGAATGAATGAATGGA 58.802 34.615 0.00 0.00 0.00 3.41
3885 5750 7.166970 CGTGAATGAATGAATGAATGAATGGAC 59.833 37.037 0.00 0.00 0.00 4.02
3886 5751 7.166970 GTGAATGAATGAATGAATGAATGGACG 59.833 37.037 0.00 0.00 0.00 4.79
3888 5753 6.367686 TGAATGAATGAATGAATGGACGAG 57.632 37.500 0.00 0.00 0.00 4.18
3890 5755 4.486125 TGAATGAATGAATGGACGAGGA 57.514 40.909 0.00 0.00 0.00 3.71
3892 5757 4.080919 TGAATGAATGAATGGACGAGGAGT 60.081 41.667 0.00 0.00 0.00 3.85
3893 5758 5.128663 TGAATGAATGAATGGACGAGGAGTA 59.871 40.000 0.00 0.00 0.00 2.59
3897 5762 5.596772 TGAATGAATGGACGAGGAGTATACA 59.403 40.000 5.50 0.00 0.00 2.29
3898 5763 6.097696 TGAATGAATGGACGAGGAGTATACAA 59.902 38.462 5.50 0.00 0.00 2.41
3909 5774 8.600449 ACGAGGAGTATACAATACTACTGTAC 57.400 38.462 15.03 2.51 38.76 2.90
3936 5807 4.687018 TCATGTTAATTACGTGTGCGAGTT 59.313 37.500 0.00 0.00 43.07 3.01
3940 5811 0.320421 ATTACGTGTGCGAGTTGGCT 60.320 50.000 0.00 0.00 42.00 4.75
3963 5847 3.955471 AGATCTTGATTGAAAAGGCGGA 58.045 40.909 0.00 0.00 0.00 5.54
3976 5866 2.251371 GCGGACTGTTTTCGTGGC 59.749 61.111 0.00 0.00 0.00 5.01
3978 5868 1.890041 CGGACTGTTTTCGTGGCCA 60.890 57.895 0.00 0.00 0.00 5.36
3984 5874 1.883275 CTGTTTTCGTGGCCATGGTTA 59.117 47.619 24.78 8.09 0.00 2.85
3986 5876 2.894126 TGTTTTCGTGGCCATGGTTATT 59.106 40.909 24.78 0.00 0.00 1.40
3988 5878 4.156922 TGTTTTCGTGGCCATGGTTATTAG 59.843 41.667 24.78 0.74 0.00 1.73
3999 5889 4.426416 CATGGTTATTAGTTCCACGTCGA 58.574 43.478 0.00 0.00 33.91 4.20
4001 5891 5.075858 TGGTTATTAGTTCCACGTCGATT 57.924 39.130 0.00 0.00 0.00 3.34
4004 5894 5.220529 GGTTATTAGTTCCACGTCGATTTGG 60.221 44.000 8.62 8.62 0.00 3.28
4005 5895 3.663995 TTAGTTCCACGTCGATTTGGA 57.336 42.857 12.68 12.68 40.30 3.53
4008 5898 1.396996 GTTCCACGTCGATTTGGATGG 59.603 52.381 16.36 6.13 41.65 3.51
4009 5899 0.899019 TCCACGTCGATTTGGATGGA 59.101 50.000 12.68 6.13 36.96 3.41
4010 5900 1.484653 TCCACGTCGATTTGGATGGAT 59.515 47.619 12.68 0.00 36.96 3.41
4011 5901 1.599071 CCACGTCGATTTGGATGGATG 59.401 52.381 9.18 0.00 34.46 3.51
4012 5902 1.599071 CACGTCGATTTGGATGGATGG 59.401 52.381 0.00 0.00 32.95 3.51
4013 5903 1.484653 ACGTCGATTTGGATGGATGGA 59.515 47.619 0.00 0.00 32.95 3.41
4014 5904 2.138320 CGTCGATTTGGATGGATGGAG 58.862 52.381 0.00 0.00 0.00 3.86
4015 5905 2.483714 CGTCGATTTGGATGGATGGAGT 60.484 50.000 0.00 0.00 0.00 3.85
4016 5906 3.545703 GTCGATTTGGATGGATGGAGTT 58.454 45.455 0.00 0.00 0.00 3.01
4017 5907 3.313526 GTCGATTTGGATGGATGGAGTTG 59.686 47.826 0.00 0.00 0.00 3.16
4018 5908 2.620115 CGATTTGGATGGATGGAGTTGG 59.380 50.000 0.00 0.00 0.00 3.77
4019 5909 3.685265 CGATTTGGATGGATGGAGTTGGA 60.685 47.826 0.00 0.00 0.00 3.53
4020 5910 3.824001 TTTGGATGGATGGAGTTGGAA 57.176 42.857 0.00 0.00 0.00 3.53
4021 5911 2.806945 TGGATGGATGGAGTTGGAAC 57.193 50.000 0.00 0.00 0.00 3.62
4024 5914 3.282885 GGATGGATGGAGTTGGAACTTC 58.717 50.000 0.00 0.00 39.88 3.01
4027 5917 2.901192 TGGATGGAGTTGGAACTTCGTA 59.099 45.455 0.00 0.00 39.88 3.43
4028 5918 3.517901 TGGATGGAGTTGGAACTTCGTAT 59.482 43.478 0.00 0.00 39.88 3.06
4029 5919 3.871594 GGATGGAGTTGGAACTTCGTATG 59.128 47.826 0.00 0.00 39.88 2.39
4032 5922 3.070446 TGGAGTTGGAACTTCGTATGTGT 59.930 43.478 0.00 0.00 39.88 3.72
4034 5924 5.221481 TGGAGTTGGAACTTCGTATGTGTTA 60.221 40.000 0.00 0.00 39.88 2.41
4037 5927 7.492474 GAGTTGGAACTTCGTATGTGTTACGT 61.492 42.308 0.00 0.00 45.39 3.57
4095 5985 0.317160 CTCAGAACCGTGGTACTGCA 59.683 55.000 0.00 0.00 0.00 4.41
4112 6002 4.936891 ACTGCACCTGAAAATCTTTTGTC 58.063 39.130 0.00 0.00 0.00 3.18
4135 6025 0.534203 TTGTGGCGGGAACAGAGAAC 60.534 55.000 0.00 0.00 0.00 3.01
4181 6071 1.661463 ACATGCCCTTCTTCCTCTCA 58.339 50.000 0.00 0.00 0.00 3.27
4271 6161 5.724854 TGGGGTAAGATAAGAAGCACTTACT 59.275 40.000 0.00 3.91 42.79 2.24
4311 6203 6.948309 ACTTAATCAGGTTACAGAAAATGGCT 59.052 34.615 0.00 0.00 0.00 4.75
4312 6204 7.451566 ACTTAATCAGGTTACAGAAAATGGCTT 59.548 33.333 0.00 0.00 0.00 4.35
4313 6205 5.904362 ATCAGGTTACAGAAAATGGCTTC 57.096 39.130 0.00 0.00 0.00 3.86
4319 6211 6.041979 AGGTTACAGAAAATGGCTTCATGTTT 59.958 34.615 0.00 0.00 28.94 2.83
4320 6212 6.705825 GGTTACAGAAAATGGCTTCATGTTTT 59.294 34.615 0.00 0.00 28.94 2.43
4321 6213 7.870445 GGTTACAGAAAATGGCTTCATGTTTTA 59.130 33.333 0.00 0.00 28.94 1.52
4322 6214 9.255304 GTTACAGAAAATGGCTTCATGTTTTAA 57.745 29.630 0.00 0.00 28.94 1.52
4323 6215 9.995003 TTACAGAAAATGGCTTCATGTTTTAAT 57.005 25.926 0.00 0.00 28.94 1.40
4324 6216 8.314143 ACAGAAAATGGCTTCATGTTTTAATG 57.686 30.769 0.00 0.00 28.94 1.90
4325 6217 8.149647 ACAGAAAATGGCTTCATGTTTTAATGA 58.850 29.630 0.00 0.00 34.75 2.57
4327 6219 9.374838 AGAAAATGGCTTCATGTTTTAATGATC 57.625 29.630 0.00 0.00 36.48 2.92
4329 6221 9.729281 AAAATGGCTTCATGTTTTAATGATCTT 57.271 25.926 0.00 0.00 36.48 2.40
4330 6222 9.729281 AAATGGCTTCATGTTTTAATGATCTTT 57.271 25.926 0.00 0.00 36.48 2.52
4333 6225 8.801299 TGGCTTCATGTTTTAATGATCTTTGTA 58.199 29.630 4.17 0.00 36.48 2.41
4334 6226 9.076596 GGCTTCATGTTTTAATGATCTTTGTAC 57.923 33.333 4.17 0.00 36.48 2.90
4335 6227 9.846248 GCTTCATGTTTTAATGATCTTTGTACT 57.154 29.630 4.17 0.00 36.48 2.73
4344 6236 9.701098 TTTAATGATCTTTGTACTTACGTGTCT 57.299 29.630 0.00 0.00 0.00 3.41
4345 6237 9.701098 TTAATGATCTTTGTACTTACGTGTCTT 57.299 29.630 0.00 0.00 0.00 3.01
4346 6238 8.603242 AATGATCTTTGTACTTACGTGTCTTT 57.397 30.769 0.00 0.00 0.00 2.52
4348 6240 8.511465 TGATCTTTGTACTTACGTGTCTTTAC 57.489 34.615 0.00 0.00 0.00 2.01
4349 6241 8.355169 TGATCTTTGTACTTACGTGTCTTTACT 58.645 33.333 0.00 0.00 0.00 2.24
4412 6304 3.808265 GCATCCAGCTGGTTATCTATGCA 60.808 47.826 33.53 15.60 37.67 3.96
4413 6305 4.392047 CATCCAGCTGGTTATCTATGCAA 58.608 43.478 31.58 8.78 36.34 4.08
4450 6342 1.098869 GTCGGCTCTCAGTCTCATGA 58.901 55.000 0.00 0.00 0.00 3.07
4464 6356 1.991264 CTCATGACAGTGACGAAGCAG 59.009 52.381 0.00 0.00 0.00 4.24
4530 6422 2.549064 TGGCCAGAATGATGTATCCG 57.451 50.000 0.00 0.00 39.69 4.18
4532 6424 1.160137 GCCAGAATGATGTATCCGCC 58.840 55.000 0.00 0.00 39.69 6.13
4545 6437 0.322322 ATCCGCCCGTGTTTAGTGAA 59.678 50.000 0.00 0.00 0.00 3.18
4548 6440 1.538075 CCGCCCGTGTTTAGTGAATTT 59.462 47.619 0.00 0.00 0.00 1.82
4550 6442 2.667171 CGCCCGTGTTTAGTGAATTTGG 60.667 50.000 0.00 0.00 0.00 3.28
4555 6447 4.451557 CGTGTTTAGTGAATTTGGACGAC 58.548 43.478 0.00 0.00 0.00 4.34
4560 6452 0.865769 GTGAATTTGGACGACGTGCT 59.134 50.000 20.39 0.00 0.00 4.40
4561 6453 2.063266 GTGAATTTGGACGACGTGCTA 58.937 47.619 20.39 10.40 0.00 3.49
4571 6464 5.038683 TGGACGACGTGCTAAAATATACTG 58.961 41.667 20.39 0.00 0.00 2.74
4574 6467 4.503007 ACGACGTGCTAAAATATACTGCTG 59.497 41.667 0.00 0.00 0.00 4.41
4597 6490 9.277565 GCTGTAGTGATTGTGTAAAATTATGTG 57.722 33.333 0.00 0.00 0.00 3.21
4620 6513 7.448161 TGTGATGTTTTGTAGAGTGAAATCCAT 59.552 33.333 0.00 0.00 0.00 3.41
4682 6576 8.092521 AGCTATCCATTTATCAGTTTTCATCG 57.907 34.615 0.00 0.00 0.00 3.84
4685 6579 9.224267 CTATCCATTTATCAGTTTTCATCGGAT 57.776 33.333 0.00 0.00 33.20 4.18
4692 6586 4.513442 TCAGTTTTCATCGGATTACCCTG 58.487 43.478 0.00 0.00 0.00 4.45
4728 6622 5.811399 TCGCAAGTTTGTATCCCAATTAG 57.189 39.130 0.00 0.00 39.48 1.73
4739 6633 6.616947 TGTATCCCAATTAGCGAAAGTTTTG 58.383 36.000 0.00 0.00 0.00 2.44
4740 6634 5.722021 ATCCCAATTAGCGAAAGTTTTGT 57.278 34.783 4.76 0.00 0.00 2.83
4742 6636 4.580995 TCCCAATTAGCGAAAGTTTTGTCA 59.419 37.500 4.76 0.00 0.00 3.58
4793 6687 5.599999 TTAAGAGTGATCTTCTAGGTGGC 57.400 43.478 0.00 0.00 0.00 5.01
4797 6691 1.414550 GTGATCTTCTAGGTGGCCCTC 59.585 57.143 0.00 0.00 41.45 4.30
4820 6714 1.595794 CCGTTTGGTATATGGCGTGAC 59.404 52.381 0.00 0.00 0.00 3.67
4836 6730 1.066303 GTGACACATTGCGGTTTTCCA 59.934 47.619 0.00 0.00 40.70 3.53
4855 6749 3.524380 TCCACCTTGTATATTTTCCCCGT 59.476 43.478 0.00 0.00 0.00 5.28
4856 6750 4.720773 TCCACCTTGTATATTTTCCCCGTA 59.279 41.667 0.00 0.00 0.00 4.02
4867 6761 0.748450 TTCCCCGTACATGGATCGAC 59.252 55.000 0.00 0.00 0.00 4.20
4872 6766 0.308068 CGTACATGGATCGACTCGCT 59.692 55.000 0.00 0.00 0.00 4.93
4876 6770 0.598680 CATGGATCGACTCGCTTCCC 60.599 60.000 14.24 5.12 31.29 3.97
4931 6825 1.334689 GCAACTGTTTAGCGGAACCAC 60.335 52.381 0.00 0.00 0.00 4.16
4932 6826 1.944024 CAACTGTTTAGCGGAACCACA 59.056 47.619 0.00 0.00 0.00 4.17
4933 6827 2.335316 ACTGTTTAGCGGAACCACAA 57.665 45.000 3.34 0.00 0.00 3.33
4934 6828 1.944709 ACTGTTTAGCGGAACCACAAC 59.055 47.619 3.34 0.00 0.00 3.32
4963 6863 3.406361 GTGCAGCTGACGACCGTG 61.406 66.667 20.43 0.00 0.00 4.94
5025 6925 4.384547 TCGTGTGAAGAACATCGTTGTATG 59.615 41.667 0.00 0.00 41.97 2.39
5060 6960 2.117137 GACATGTCACGCGTACATAGG 58.883 52.381 24.03 18.16 35.82 2.57
5069 6969 1.535437 CGCGTACATAGGAACAGGACC 60.535 57.143 0.00 0.00 0.00 4.46
5073 6973 3.893200 CGTACATAGGAACAGGACCCATA 59.107 47.826 0.00 0.00 0.00 2.74
5089 6989 4.666512 ACCCATAGTTGCTCTCAAAACAT 58.333 39.130 0.00 0.00 33.37 2.71
5152 7052 9.280174 GAGGTAATTCGGATGATACCAAATTAA 57.720 33.333 7.23 0.00 40.21 1.40
5322 7251 9.796120 TTACTAATGTTAATTTAGCCACATTGC 57.204 29.630 12.23 0.00 39.60 3.56
5380 7309 1.819632 GCAATCCTGTGGGCCTACG 60.820 63.158 15.22 9.25 0.00 3.51
5404 7333 4.275196 TCATACAGTATGACTCACCTACGC 59.725 45.833 17.93 0.00 40.09 4.42
5405 7334 1.749634 ACAGTATGACTCACCTACGCC 59.250 52.381 0.00 0.00 39.69 5.68
5406 7335 1.749063 CAGTATGACTCACCTACGCCA 59.251 52.381 0.00 0.00 39.69 5.69
5407 7336 2.362397 CAGTATGACTCACCTACGCCAT 59.638 50.000 0.00 0.00 39.69 4.40
5408 7337 3.568430 CAGTATGACTCACCTACGCCATA 59.432 47.826 0.00 0.00 39.69 2.74
5409 7338 3.568853 AGTATGACTCACCTACGCCATAC 59.431 47.826 0.00 0.00 37.61 2.39
5410 7339 1.842052 TGACTCACCTACGCCATACA 58.158 50.000 0.00 0.00 0.00 2.29
5411 7340 1.749063 TGACTCACCTACGCCATACAG 59.251 52.381 0.00 0.00 0.00 2.74
5412 7341 1.749634 GACTCACCTACGCCATACAGT 59.250 52.381 0.00 0.00 0.00 3.55
5413 7342 2.947652 GACTCACCTACGCCATACAGTA 59.052 50.000 0.00 0.00 0.00 2.74
5414 7343 2.950309 ACTCACCTACGCCATACAGTAG 59.050 50.000 0.00 0.00 39.84 2.57
5415 7344 2.950309 CTCACCTACGCCATACAGTAGT 59.050 50.000 2.57 0.00 38.82 2.73
5416 7345 4.132336 CTCACCTACGCCATACAGTAGTA 58.868 47.826 2.57 0.00 38.82 1.82
5417 7346 3.879295 TCACCTACGCCATACAGTAGTAC 59.121 47.826 0.00 0.00 38.82 2.73
5418 7347 3.881688 CACCTACGCCATACAGTAGTACT 59.118 47.826 0.00 0.00 38.82 2.73
5419 7348 5.059161 CACCTACGCCATACAGTAGTACTA 58.941 45.833 1.57 0.00 38.82 1.82
5420 7349 5.049818 CACCTACGCCATACAGTAGTACTAC 60.050 48.000 23.03 23.03 38.82 2.73
5421 7350 5.059161 CCTACGCCATACAGTAGTACTACA 58.941 45.833 29.87 13.75 38.82 2.74
5422 7351 5.178996 CCTACGCCATACAGTAGTACTACAG 59.821 48.000 29.87 25.14 38.82 2.74
5423 7352 4.521146 ACGCCATACAGTAGTACTACAGT 58.479 43.478 29.87 28.67 38.88 3.55
5424 7353 5.674525 ACGCCATACAGTAGTACTACAGTA 58.325 41.667 29.44 29.44 40.58 2.74
5425 7354 5.757320 ACGCCATACAGTAGTACTACAGTAG 59.243 44.000 30.16 22.57 39.98 2.57
5426 7355 5.178996 CGCCATACAGTAGTACTACAGTAGG 59.821 48.000 30.16 29.55 39.98 3.18
5427 7356 5.048852 GCCATACAGTAGTACTACAGTAGGC 60.049 48.000 32.76 32.76 39.98 3.93
5428 7357 5.178996 CCATACAGTAGTACTACAGTAGGCG 59.821 48.000 29.83 22.76 39.98 5.52
5429 7358 3.539604 ACAGTAGTACTACAGTAGGCGG 58.460 50.000 29.87 13.40 38.48 6.13
5430 7359 2.877168 CAGTAGTACTACAGTAGGCGGG 59.123 54.545 29.87 8.07 38.48 6.13
5431 7360 2.507471 AGTAGTACTACAGTAGGCGGGT 59.493 50.000 29.87 6.99 38.48 5.28
5432 7361 2.521547 AGTACTACAGTAGGCGGGTT 57.478 50.000 12.42 0.00 0.00 4.11
5433 7362 2.812658 AGTACTACAGTAGGCGGGTTT 58.187 47.619 12.42 0.00 0.00 3.27
5434 7363 3.168292 AGTACTACAGTAGGCGGGTTTT 58.832 45.455 12.42 0.00 0.00 2.43
5435 7364 2.756840 ACTACAGTAGGCGGGTTTTC 57.243 50.000 12.42 0.00 0.00 2.29
5436 7365 2.254508 ACTACAGTAGGCGGGTTTTCT 58.745 47.619 12.42 0.00 0.00 2.52
5437 7366 3.434309 ACTACAGTAGGCGGGTTTTCTA 58.566 45.455 12.42 0.00 0.00 2.10
5438 7367 4.028825 ACTACAGTAGGCGGGTTTTCTAT 58.971 43.478 12.42 0.00 0.00 1.98
5439 7368 3.994931 ACAGTAGGCGGGTTTTCTATT 57.005 42.857 0.00 0.00 0.00 1.73
5440 7369 4.296621 ACAGTAGGCGGGTTTTCTATTT 57.703 40.909 0.00 0.00 0.00 1.40
5441 7370 4.659115 ACAGTAGGCGGGTTTTCTATTTT 58.341 39.130 0.00 0.00 0.00 1.82
5442 7371 5.074804 ACAGTAGGCGGGTTTTCTATTTTT 58.925 37.500 0.00 0.00 0.00 1.94
5443 7372 5.182570 ACAGTAGGCGGGTTTTCTATTTTTC 59.817 40.000 0.00 0.00 0.00 2.29
5444 7373 5.414765 CAGTAGGCGGGTTTTCTATTTTTCT 59.585 40.000 0.00 0.00 0.00 2.52
5445 7374 6.008331 AGTAGGCGGGTTTTCTATTTTTCTT 58.992 36.000 0.00 0.00 0.00 2.52
5446 7375 5.801531 AGGCGGGTTTTCTATTTTTCTTT 57.198 34.783 0.00 0.00 0.00 2.52
5447 7376 6.169557 AGGCGGGTTTTCTATTTTTCTTTT 57.830 33.333 0.00 0.00 0.00 2.27
5448 7377 5.989168 AGGCGGGTTTTCTATTTTTCTTTTG 59.011 36.000 0.00 0.00 0.00 2.44
5449 7378 5.756347 GGCGGGTTTTCTATTTTTCTTTTGT 59.244 36.000 0.00 0.00 0.00 2.83
5450 7379 6.292649 GGCGGGTTTTCTATTTTTCTTTTGTG 60.293 38.462 0.00 0.00 0.00 3.33
5451 7380 6.256975 GCGGGTTTTCTATTTTTCTTTTGTGT 59.743 34.615 0.00 0.00 0.00 3.72
5452 7381 7.516155 GCGGGTTTTCTATTTTTCTTTTGTGTC 60.516 37.037 0.00 0.00 0.00 3.67
5453 7382 7.042992 CGGGTTTTCTATTTTTCTTTTGTGTCC 60.043 37.037 0.00 0.00 0.00 4.02
5454 7383 7.766738 GGGTTTTCTATTTTTCTTTTGTGTCCA 59.233 33.333 0.00 0.00 0.00 4.02
5455 7384 9.325198 GGTTTTCTATTTTTCTTTTGTGTCCAT 57.675 29.630 0.00 0.00 0.00 3.41
5482 7411 9.817809 TTTTTCTCTATAATACTCGAGTGCATT 57.182 29.630 28.12 21.17 0.00 3.56
5483 7412 9.817809 TTTTCTCTATAATACTCGAGTGCATTT 57.182 29.630 28.12 16.84 0.00 2.32
5484 7413 9.817809 TTTCTCTATAATACTCGAGTGCATTTT 57.182 29.630 28.12 16.60 0.00 1.82
5485 7414 9.817809 TTCTCTATAATACTCGAGTGCATTTTT 57.182 29.630 28.12 13.07 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
158 159 3.907474 TCAACTCACTACCAAATCAGGGA 59.093 43.478 0.00 0.00 0.00 4.20
572 610 5.892160 TCTTGAGAGCATTTCCTGAATTG 57.108 39.130 0.00 0.00 0.00 2.32
586 625 6.460261 GGTTCCCTTTTGTTCTTTCTTGAGAG 60.460 42.308 0.00 0.00 0.00 3.20
600 639 0.109723 TCGTCCCTGGTTCCCTTTTG 59.890 55.000 0.00 0.00 0.00 2.44
605 644 4.078516 CGGTCGTCCCTGGTTCCC 62.079 72.222 0.00 0.00 0.00 3.97
613 652 0.248949 GATCTACTTGCGGTCGTCCC 60.249 60.000 0.00 0.00 0.00 4.46
708 752 4.402829 TGCCTTGTTTTCTTGCAGGTATA 58.597 39.130 0.00 0.00 0.00 1.47
712 756 2.144482 CTGCCTTGTTTTCTTGCAGG 57.856 50.000 0.00 0.00 44.29 4.85
729 773 4.205996 CAGAGATCGACGTGCTTATTTCTG 59.794 45.833 0.00 0.00 0.00 3.02
784 828 2.962786 TTGTGTCGAACGCCACCG 60.963 61.111 5.97 0.00 41.14 4.94
817 861 1.003545 CCTCGTGCAACACAAGAACAG 60.004 52.381 0.00 0.00 36.29 3.16
844 896 2.883267 ATTCGAAGCTGGGCCTGAGC 62.883 60.000 15.36 16.92 36.65 4.26
907 959 1.391485 CGGAGAAAGCACTTCACGATG 59.609 52.381 0.00 0.00 38.31 3.84
950 1002 3.701542 AGGACGATGATCTGCAAACTAGA 59.298 43.478 0.00 0.00 0.00 2.43
959 1011 5.230306 GTCGAAGTTAAAGGACGATGATCTG 59.770 44.000 0.00 0.00 35.57 2.90
990 1042 5.948992 AGAAGAGGTGCATCAAACTTAAC 57.051 39.130 0.00 0.00 0.00 2.01
1102 1154 2.802816 GAGAGAGAGAGACGAGAGCATC 59.197 54.545 0.00 0.00 0.00 3.91
1108 1160 3.634448 AGAGAGAGAGAGAGAGAGACGAG 59.366 52.174 0.00 0.00 0.00 4.18
1109 1161 3.632333 AGAGAGAGAGAGAGAGAGACGA 58.368 50.000 0.00 0.00 0.00 4.20
1424 1482 8.633075 AACAAAGAAAGATAAATGTGTGTGTG 57.367 30.769 0.00 0.00 0.00 3.82
1425 1483 8.686334 AGAACAAAGAAAGATAAATGTGTGTGT 58.314 29.630 0.00 0.00 0.00 3.72
1426 1484 9.520204 AAGAACAAAGAAAGATAAATGTGTGTG 57.480 29.630 0.00 0.00 0.00 3.82
1438 1496 9.981114 AACAAAGAAAGAAAGAACAAAGAAAGA 57.019 25.926 0.00 0.00 0.00 2.52
1442 1500 9.541143 AAACAACAAAGAAAGAAAGAACAAAGA 57.459 25.926 0.00 0.00 0.00 2.52
1475 1533 1.412343 TGCAAAACCCAAAGAAGCTCC 59.588 47.619 0.00 0.00 0.00 4.70
1487 1549 2.827921 AGATGATGTTCCCTGCAAAACC 59.172 45.455 0.00 0.00 0.00 3.27
1542 1604 3.002708 GCAAATGCATGCATGATCGTA 57.997 42.857 32.79 10.28 45.70 3.43
1543 1605 1.847818 GCAAATGCATGCATGATCGT 58.152 45.000 32.79 14.89 45.70 3.73
1561 1638 6.876804 ACAAAAACGAATTAAATGCTTCTGC 58.123 32.000 0.00 0.00 40.20 4.26
1588 1665 2.029290 CCTCCTCGAGAAAAGACGGAAA 60.029 50.000 15.71 0.00 0.00 3.13
1592 1669 2.423892 TGATCCTCCTCGAGAAAAGACG 59.576 50.000 15.71 0.00 0.00 4.18
1593 1670 4.177783 GTTGATCCTCCTCGAGAAAAGAC 58.822 47.826 15.71 1.96 0.00 3.01
1595 1672 3.526534 GGTTGATCCTCCTCGAGAAAAG 58.473 50.000 15.71 8.18 0.00 2.27
1600 1677 2.128729 GGGGTTGATCCTCCTCGAG 58.871 63.158 5.13 5.13 36.25 4.04
1613 1690 1.967779 CAGAAACAAAATCCGGGGGTT 59.032 47.619 0.00 0.00 0.00 4.11
1643 1728 4.339872 AACAACAATCAACCATGCATGT 57.660 36.364 24.58 10.59 0.00 3.21
1665 1750 3.129287 GCTGCACCATTTATGTAAGCACT 59.871 43.478 0.00 0.00 32.41 4.40
1666 1751 3.438360 GCTGCACCATTTATGTAAGCAC 58.562 45.455 0.00 0.00 32.41 4.40
1705 1791 2.626780 CGTCGACCTGCTCCTCACA 61.627 63.158 10.58 0.00 0.00 3.58
1744 1830 1.557099 TGAGCAAGGTGAGGACGTAT 58.443 50.000 0.00 0.00 0.00 3.06
1756 1842 2.161012 CCATAGCAGTGTGTTGAGCAAG 59.839 50.000 0.00 0.00 0.00 4.01
1852 1938 3.067601 TGAGGAAAAGCGCGATGTAGATA 59.932 43.478 12.10 0.00 0.00 1.98
1863 1949 0.931005 GGCGTAGATGAGGAAAAGCG 59.069 55.000 0.00 0.00 0.00 4.68
1867 1953 0.099968 CGACGGCGTAGATGAGGAAA 59.900 55.000 14.74 0.00 0.00 3.13
1874 1960 0.870307 GCATTGTCGACGGCGTAGAT 60.870 55.000 24.81 7.51 38.98 1.98
1884 1970 2.156098 GTACCCTTTTGGCATTGTCGA 58.844 47.619 0.00 0.00 37.83 4.20
1920 2006 7.581011 CAAATGGGTTTTATTTGTAGACTGC 57.419 36.000 0.00 0.00 39.49 4.40
1934 2051 6.116126 GCTGTCTAGAGATACAAATGGGTTT 58.884 40.000 0.00 0.00 0.00 3.27
1950 2069 7.856145 AATTCAGGAGTAAATTGCTGTCTAG 57.144 36.000 0.00 0.00 37.71 2.43
1978 2097 1.270839 TGTACTCTTGCCTCCAGTTGC 60.271 52.381 0.00 0.00 0.00 4.17
1980 2099 4.373156 AAATGTACTCTTGCCTCCAGTT 57.627 40.909 0.00 0.00 0.00 3.16
1981 2100 4.327680 GAAAATGTACTCTTGCCTCCAGT 58.672 43.478 0.00 0.00 0.00 4.00
1982 2101 3.691609 GGAAAATGTACTCTTGCCTCCAG 59.308 47.826 0.00 0.00 0.00 3.86
1983 2102 3.561313 GGGAAAATGTACTCTTGCCTCCA 60.561 47.826 0.00 0.00 0.00 3.86
1984 2103 3.017442 GGGAAAATGTACTCTTGCCTCC 58.983 50.000 0.00 0.00 0.00 4.30
1985 2104 3.686016 TGGGAAAATGTACTCTTGCCTC 58.314 45.455 11.75 2.24 32.20 4.70
1986 2105 3.806949 TGGGAAAATGTACTCTTGCCT 57.193 42.857 11.75 0.00 32.20 4.75
1987 2106 4.462483 TCAATGGGAAAATGTACTCTTGCC 59.538 41.667 0.00 0.31 0.00 4.52
1988 2107 5.415701 TCTCAATGGGAAAATGTACTCTTGC 59.584 40.000 0.00 0.00 0.00 4.01
1989 2108 6.881065 TCTCTCAATGGGAAAATGTACTCTTG 59.119 38.462 0.00 0.00 0.00 3.02
1992 2111 6.881602 AGTTCTCTCAATGGGAAAATGTACTC 59.118 38.462 0.00 0.00 0.00 2.59
1993 2112 6.784031 AGTTCTCTCAATGGGAAAATGTACT 58.216 36.000 0.00 0.00 0.00 2.73
1994 2113 8.738645 ATAGTTCTCTCAATGGGAAAATGTAC 57.261 34.615 0.00 0.00 0.00 2.90
1995 2114 9.832445 GTATAGTTCTCTCAATGGGAAAATGTA 57.168 33.333 0.00 0.00 0.00 2.29
1996 2115 7.495934 CGTATAGTTCTCTCAATGGGAAAATGT 59.504 37.037 0.00 0.00 0.00 2.71
1997 2116 7.710907 TCGTATAGTTCTCTCAATGGGAAAATG 59.289 37.037 0.00 0.00 0.00 2.32
1998 2117 7.792032 TCGTATAGTTCTCTCAATGGGAAAAT 58.208 34.615 0.00 0.00 0.00 1.82
1999 2118 7.093465 ACTCGTATAGTTCTCTCAATGGGAAAA 60.093 37.037 0.00 0.00 33.35 2.29
2012 2291 3.137913 TGGGGAGCTACTCGTATAGTTCT 59.862 47.826 0.00 0.00 39.80 3.01
2021 2300 2.821991 CCTTAATGGGGAGCTACTCG 57.178 55.000 0.00 0.00 0.00 4.18
2099 2712 6.237901 AGTGTATGAAATTACTTGAGCACCA 58.762 36.000 0.00 0.00 0.00 4.17
2138 3476 3.521560 TGTTGCGAGTAAAGATAGCCAG 58.478 45.455 0.00 0.00 0.00 4.85
2151 3489 9.326339 CAATCAATATGAAAGATATGTTGCGAG 57.674 33.333 0.00 0.00 29.87 5.03
2173 3531 3.878086 TGCGACTCAACAGAAACAATC 57.122 42.857 0.00 0.00 0.00 2.67
2214 3572 6.659242 ACTGAAATAGGACACCAAATAAGTGG 59.341 38.462 0.00 0.00 44.92 4.00
2215 3573 7.687941 ACTGAAATAGGACACCAAATAAGTG 57.312 36.000 0.00 0.00 41.15 3.16
2217 3575 7.029563 GCAACTGAAATAGGACACCAAATAAG 58.970 38.462 0.00 0.00 0.00 1.73
2218 3576 6.348950 CGCAACTGAAATAGGACACCAAATAA 60.349 38.462 0.00 0.00 0.00 1.40
2220 3578 4.082787 CGCAACTGAAATAGGACACCAAAT 60.083 41.667 0.00 0.00 0.00 2.32
2223 3581 2.224426 ACGCAACTGAAATAGGACACCA 60.224 45.455 0.00 0.00 0.00 4.17
2225 3583 5.600908 TTAACGCAACTGAAATAGGACAC 57.399 39.130 0.00 0.00 0.00 3.67
2226 3584 5.703592 ACATTAACGCAACTGAAATAGGACA 59.296 36.000 0.00 0.00 0.00 4.02
2227 3585 6.021596 CACATTAACGCAACTGAAATAGGAC 58.978 40.000 0.00 0.00 0.00 3.85
2262 3622 9.924650 TGAAGTACTTTTAGAGTAGAAATGGTC 57.075 33.333 10.02 0.00 41.41 4.02
2325 3882 2.704572 ACTGTATGCTGTTTCCAGAGC 58.295 47.619 0.00 0.00 41.50 4.09
2328 3885 7.849804 AGTAATAACTGTATGCTGTTTCCAG 57.150 36.000 11.04 0.00 37.78 3.86
2360 3917 7.105588 GCCACATGATCTTCCATATACATGTA 58.894 38.462 8.27 8.27 43.74 2.29
2361 3918 5.942236 GCCACATGATCTTCCATATACATGT 59.058 40.000 2.69 2.69 45.52 3.21
2362 3919 5.941647 TGCCACATGATCTTCCATATACATG 59.058 40.000 0.00 0.00 40.24 3.21
2365 3922 5.106396 GCTTGCCACATGATCTTCCATATAC 60.106 44.000 0.00 0.00 0.00 1.47
2374 3931 2.401583 TTACGCTTGCCACATGATCT 57.598 45.000 0.00 0.00 0.00 2.75
2379 3936 2.009774 GTCTGATTACGCTTGCCACAT 58.990 47.619 0.00 0.00 0.00 3.21
2380 3937 1.270571 TGTCTGATTACGCTTGCCACA 60.271 47.619 0.00 0.00 0.00 4.17
2381 3938 1.438651 TGTCTGATTACGCTTGCCAC 58.561 50.000 0.00 0.00 0.00 5.01
2408 3965 9.100554 GGCAACATGATATGATTGATTCAAAAA 57.899 29.630 0.00 0.00 38.03 1.94
2412 3969 6.072649 AGGGCAACATGATATGATTGATTCA 58.927 36.000 0.00 0.00 37.17 2.57
2413 3970 6.585695 AGGGCAACATGATATGATTGATTC 57.414 37.500 0.00 0.00 39.74 2.52
2431 3988 3.319689 GCAGTTTTAACCTGTAAAGGGCA 59.680 43.478 3.35 0.00 0.00 5.36
2432 3989 3.610821 CGCAGTTTTAACCTGTAAAGGGC 60.611 47.826 3.35 0.00 0.00 5.19
2451 4009 1.034838 AAACTGCCACCAACTTCGCA 61.035 50.000 0.00 0.00 0.00 5.10
2454 4012 1.754226 TCCAAAACTGCCACCAACTTC 59.246 47.619 0.00 0.00 0.00 3.01
2493 4051 3.578272 GTTGTGGCCGCGAACACA 61.578 61.111 24.95 24.95 45.06 3.72
2523 4081 4.730949 CATGATTTTCATGTCAAGCCCT 57.269 40.909 8.92 0.00 46.80 5.19
2626 4184 6.321181 AGAAAGTTAAGCAAACAGATGACCAA 59.679 34.615 4.96 0.00 40.83 3.67
2627 4185 5.827797 AGAAAGTTAAGCAAACAGATGACCA 59.172 36.000 4.96 0.00 40.83 4.02
2628 4186 6.319141 AGAAAGTTAAGCAAACAGATGACC 57.681 37.500 4.96 0.00 40.83 4.02
2629 4187 7.173390 ACCTAGAAAGTTAAGCAAACAGATGAC 59.827 37.037 4.96 0.00 40.83 3.06
2630 4188 7.224297 ACCTAGAAAGTTAAGCAAACAGATGA 58.776 34.615 4.96 0.00 40.83 2.92
2631 4189 7.440523 ACCTAGAAAGTTAAGCAAACAGATG 57.559 36.000 4.96 0.00 40.83 2.90
2633 4191 7.875327 AAACCTAGAAAGTTAAGCAAACAGA 57.125 32.000 4.96 0.00 40.83 3.41
2635 4193 9.959749 CATAAAACCTAGAAAGTTAAGCAAACA 57.040 29.630 4.96 0.00 40.83 2.83
2636 4194 9.961265 ACATAAAACCTAGAAAGTTAAGCAAAC 57.039 29.630 0.00 0.00 38.46 2.93
2694 4278 8.591312 TCGAAACAACAAAAAGAAGCATAAAAG 58.409 29.630 0.00 0.00 0.00 2.27
2699 4283 5.406649 TGTCGAAACAACAAAAAGAAGCAT 58.593 33.333 0.00 0.00 30.70 3.79
2714 4299 6.711579 TCTTTGTCAGTTACATTGTCGAAAC 58.288 36.000 0.00 0.00 38.10 2.78
2716 4301 6.277605 TCTCTTTGTCAGTTACATTGTCGAA 58.722 36.000 0.00 0.00 38.10 3.71
2717 4302 5.838529 TCTCTTTGTCAGTTACATTGTCGA 58.161 37.500 0.00 0.00 38.10 4.20
2718 4303 5.119279 CCTCTCTTTGTCAGTTACATTGTCG 59.881 44.000 0.00 0.00 38.10 4.35
2720 4305 5.930135 ACCTCTCTTTGTCAGTTACATTGT 58.070 37.500 0.00 0.00 38.10 2.71
2721 4306 6.226787 AGACCTCTCTTTGTCAGTTACATTG 58.773 40.000 0.00 0.00 38.10 2.82
2722 4307 6.426646 AGACCTCTCTTTGTCAGTTACATT 57.573 37.500 0.00 0.00 38.10 2.71
2723 4308 5.336055 CGAGACCTCTCTTTGTCAGTTACAT 60.336 44.000 0.93 0.00 40.75 2.29
2727 4312 3.223435 TCGAGACCTCTCTTTGTCAGTT 58.777 45.455 0.93 0.00 40.75 3.16
2734 4319 3.203487 ACCCTATCTCGAGACCTCTCTTT 59.797 47.826 19.30 1.20 40.75 2.52
2735 4320 2.781174 ACCCTATCTCGAGACCTCTCTT 59.219 50.000 19.30 2.04 40.75 2.85
2743 4328 0.107361 TCGCACACCCTATCTCGAGA 60.107 55.000 19.19 19.19 0.00 4.04
2746 4331 2.225068 ATTTCGCACACCCTATCTCG 57.775 50.000 0.00 0.00 0.00 4.04
2753 4338 3.527533 TGTATCACTATTTCGCACACCC 58.472 45.455 0.00 0.00 0.00 4.61
2789 4374 2.676632 TCATTTACGTGTATGGGCGT 57.323 45.000 0.00 0.00 44.02 5.68
2824 4414 8.682936 AAGCGAGTTATTTGATAGGATTCAAT 57.317 30.769 0.00 0.00 35.64 2.57
2827 4417 7.920738 ACAAAGCGAGTTATTTGATAGGATTC 58.079 34.615 4.79 0.00 38.42 2.52
2835 4471 7.021196 GCATTCTTACAAAGCGAGTTATTTGA 58.979 34.615 4.79 0.00 38.42 2.69
2852 4488 7.936847 TGAAAAGTTTCACTCCTAGCATTCTTA 59.063 33.333 2.32 0.00 41.88 2.10
2855 4491 6.560253 TGAAAAGTTTCACTCCTAGCATTC 57.440 37.500 2.32 0.00 41.88 2.67
2874 4514 5.065474 CGCCCGATACTCCTTAAAATTGAAA 59.935 40.000 0.00 0.00 0.00 2.69
2893 4533 0.523966 TGTAGGAAAAATTGCGCCCG 59.476 50.000 4.18 0.00 0.00 6.13
2919 4575 9.467258 CTTCAAAACAGATGTTCATGTATGTTT 57.533 29.630 0.00 2.06 41.28 2.83
2924 4580 7.995289 ACAACTTCAAAACAGATGTTCATGTA 58.005 30.769 0.00 0.00 37.25 2.29
2925 4581 6.866480 ACAACTTCAAAACAGATGTTCATGT 58.134 32.000 0.00 0.00 37.25 3.21
2937 4593 9.724839 TTTTGCAGTACTATACAACTTCAAAAC 57.275 29.630 12.34 0.00 40.99 2.43
2938 4594 9.944663 CTTTTGCAGTACTATACAACTTCAAAA 57.055 29.630 14.19 14.19 42.45 2.44
2976 4704 7.395489 GGAAATATGCCATTGGATAGATGTCTT 59.605 37.037 6.95 0.00 0.00 3.01
2978 4706 6.183360 CGGAAATATGCCATTGGATAGATGTC 60.183 42.308 6.95 2.14 0.00 3.06
2985 4713 3.565307 ACACGGAAATATGCCATTGGAT 58.435 40.909 6.95 0.00 0.00 3.41
2988 4716 4.108699 ACAACACGGAAATATGCCATTG 57.891 40.909 0.00 0.00 0.00 2.82
2992 4720 6.613755 AGTTATACAACACGGAAATATGCC 57.386 37.500 0.00 0.00 37.10 4.40
2993 4721 9.594038 CATAAGTTATACAACACGGAAATATGC 57.406 33.333 0.00 0.00 37.10 3.14
3001 4744 7.591006 ACAAGACATAAGTTATACAACACGG 57.409 36.000 0.00 0.00 37.10 4.94
3019 4762 9.944663 TGATCACAAATTTTGTACTAACAAGAC 57.055 29.630 14.13 2.58 45.99 3.01
3030 4773 6.200097 GGCGTAACTTTGATCACAAATTTTGT 59.800 34.615 8.97 8.97 46.75 2.83
3031 4774 6.346518 GGGCGTAACTTTGATCACAAATTTTG 60.347 38.462 7.59 7.59 43.64 2.44
3042 4785 4.279671 TCAAATTGTGGGCGTAACTTTGAT 59.720 37.500 0.00 0.00 0.00 2.57
3048 4791 1.883926 ACCTCAAATTGTGGGCGTAAC 59.116 47.619 17.12 0.00 35.44 2.50
3052 4795 1.586028 CCACCTCAAATTGTGGGCG 59.414 57.895 17.12 8.47 46.67 6.13
3077 4821 7.681168 ACCCTCCCTCCGTCAAAATATATATAA 59.319 37.037 0.00 0.00 0.00 0.98
3089 4897 2.043248 GCTACCCTCCCTCCGTCA 60.043 66.667 0.00 0.00 0.00 4.35
3101 4909 8.736244 TCATCAATACCTTTACTTTTTGCTACC 58.264 33.333 0.00 0.00 0.00 3.18
3115 4923 7.643123 AGTTTATTGAGGGTCATCAATACCTT 58.357 34.615 14.94 4.21 46.61 3.50
3128 4936 9.635520 CCGTACTGTATTATAGTTTATTGAGGG 57.364 37.037 0.00 0.00 0.00 4.30
3178 4988 6.154192 TGCATAGAAACAAGGATGCCATTTTA 59.846 34.615 3.46 0.00 43.26 1.52
3182 4992 3.634504 TGCATAGAAACAAGGATGCCAT 58.365 40.909 3.46 0.00 43.26 4.40
3183 4993 3.084536 TGCATAGAAACAAGGATGCCA 57.915 42.857 3.46 0.00 43.26 4.92
3184 4994 4.660789 ATTGCATAGAAACAAGGATGCC 57.339 40.909 3.46 0.00 43.26 4.40
3185 4995 7.031226 TCTAATTGCATAGAAACAAGGATGC 57.969 36.000 0.00 0.00 44.00 3.91
3186 4996 9.064706 AGATCTAATTGCATAGAAACAAGGATG 57.935 33.333 0.00 0.00 35.64 3.51
3214 5024 9.150028 TCTGGTAGTACTTTGCCACATATAATA 57.850 33.333 0.00 0.00 0.00 0.98
3218 5028 5.950544 TCTGGTAGTACTTTGCCACATAT 57.049 39.130 0.00 0.00 0.00 1.78
3219 5029 5.423931 TGATCTGGTAGTACTTTGCCACATA 59.576 40.000 0.00 0.00 0.00 2.29
3226 5036 8.954950 ATCAAAGATGATCTGGTAGTACTTTG 57.045 34.615 0.00 0.00 42.75 2.77
3258 5083 7.537649 CCTCACGATGTGTATGTATACATGTAC 59.462 40.741 25.48 21.97 44.25 2.90
3259 5084 7.590279 CCTCACGATGTGTATGTATACATGTA 58.410 38.462 25.48 8.27 44.25 2.29
3260 5085 6.447162 CCTCACGATGTGTATGTATACATGT 58.553 40.000 25.48 11.80 44.25 3.21
3261 5086 5.346011 GCCTCACGATGTGTATGTATACATG 59.654 44.000 25.48 11.20 44.25 3.21
3262 5087 5.010617 TGCCTCACGATGTGTATGTATACAT 59.989 40.000 21.57 21.57 44.25 2.29
3263 5088 4.339814 TGCCTCACGATGTGTATGTATACA 59.660 41.667 8.27 8.27 40.69 2.29
3264 5089 4.866921 TGCCTCACGATGTGTATGTATAC 58.133 43.478 0.00 0.00 34.79 1.47
3265 5090 4.558697 GCTGCCTCACGATGTGTATGTATA 60.559 45.833 0.00 0.00 34.79 1.47
3284 5109 1.065551 GTATCCCAACGAAATGGCTGC 59.934 52.381 0.00 0.00 39.26 5.25
3294 5119 0.725117 GAACCTTGCGTATCCCAACG 59.275 55.000 0.00 0.00 45.58 4.10
3313 5142 5.163385 TGGGAACTGTATATAACTTGACCGG 60.163 44.000 0.00 0.00 0.00 5.28
3322 5151 8.636213 GTGTTAGCTAGTGGGAACTGTATATAA 58.364 37.037 0.00 0.00 0.00 0.98
3323 5152 8.003044 AGTGTTAGCTAGTGGGAACTGTATATA 58.997 37.037 0.00 0.00 0.00 0.86
3324 5153 6.839657 AGTGTTAGCTAGTGGGAACTGTATAT 59.160 38.462 0.00 0.00 0.00 0.86
3334 5163 4.642429 ACAAGAAAGTGTTAGCTAGTGGG 58.358 43.478 0.00 0.00 0.00 4.61
3358 5187 1.345089 ACGCAAGGTGTACACATACCA 59.655 47.619 26.51 0.00 46.39 3.25
3361 5190 1.619332 TGGACGCAAGGTGTACACATA 59.381 47.619 26.51 0.41 46.39 2.29
3409 5248 7.701539 AAAATGCAGATGTATAAGTTGACCA 57.298 32.000 0.00 0.00 0.00 4.02
3443 5292 7.812690 TCCGTGCAAGTTTACTAGATCTATA 57.187 36.000 2.11 0.00 0.00 1.31
3447 5296 7.145985 TCATATCCGTGCAAGTTTACTAGATC 58.854 38.462 0.00 0.00 0.00 2.75
3450 5299 8.297426 TCTATCATATCCGTGCAAGTTTACTAG 58.703 37.037 0.00 0.00 0.00 2.57
3451 5300 8.080417 GTCTATCATATCCGTGCAAGTTTACTA 58.920 37.037 0.00 0.00 0.00 1.82
3453 5302 6.700081 TGTCTATCATATCCGTGCAAGTTTAC 59.300 38.462 0.00 0.00 0.00 2.01
3455 5304 5.670485 TGTCTATCATATCCGTGCAAGTTT 58.330 37.500 0.00 0.00 0.00 2.66
3458 5307 5.233225 ACATGTCTATCATATCCGTGCAAG 58.767 41.667 0.00 0.00 34.67 4.01
3459 5308 5.213891 ACATGTCTATCATATCCGTGCAA 57.786 39.130 0.00 0.00 34.67 4.08
3460 5309 4.871933 ACATGTCTATCATATCCGTGCA 57.128 40.909 0.00 0.00 34.67 4.57
3461 5310 6.390721 ACTTACATGTCTATCATATCCGTGC 58.609 40.000 0.00 0.00 34.67 5.34
3511 5363 6.502195 CGGATATATTCTGCATATCGTGTG 57.498 41.667 0.00 0.00 36.59 3.82
3593 5446 6.652481 TCAAACAACTCAAATGAGATCTCCTC 59.348 38.462 20.03 0.00 44.74 3.71
3606 5460 2.034053 GGCGTCCAATCAAACAACTCAA 59.966 45.455 0.00 0.00 0.00 3.02
3609 5463 1.686355 TGGCGTCCAATCAAACAACT 58.314 45.000 0.00 0.00 0.00 3.16
3627 5481 6.738114 TGTTTCCTCTGAAAATAGCAGTTTG 58.262 36.000 0.00 0.00 41.92 2.93
3628 5482 6.515696 GCTGTTTCCTCTGAAAATAGCAGTTT 60.516 38.462 14.72 0.00 44.35 2.66
3633 5494 3.758554 TGGCTGTTTCCTCTGAAAATAGC 59.241 43.478 12.44 12.44 44.29 2.97
3665 5530 1.154131 CGATCGATCAGCCGGCTAG 60.154 63.158 32.30 23.08 0.00 3.42
3670 5535 3.104470 CAAGATATCGATCGATCAGCCG 58.896 50.000 32.50 16.34 37.15 5.52
3691 5556 0.597637 ATACGATACGCTGCAGCACC 60.598 55.000 36.03 20.26 42.21 5.01
3700 5565 2.736144 TCCCCAATGATACGATACGC 57.264 50.000 0.00 0.00 0.00 4.42
3701 5566 6.816640 ACAAATATCCCCAATGATACGATACG 59.183 38.462 0.00 0.00 30.36 3.06
3713 5578 7.345914 CCCCAACTAATTAACAAATATCCCCAA 59.654 37.037 0.00 0.00 0.00 4.12
3716 5581 7.907841 ACCCCAACTAATTAACAAATATCCC 57.092 36.000 0.00 0.00 0.00 3.85
3753 5618 9.859427 AATTAAGCAATACGTGTACTAGTGTAA 57.141 29.630 5.39 0.00 0.00 2.41
3755 5620 9.859427 TTAATTAAGCAATACGTGTACTAGTGT 57.141 29.630 5.39 0.00 0.00 3.55
3816 5681 6.949352 ACATGTTTCTGACTTGTTCTGAAT 57.051 33.333 0.00 0.00 42.16 2.57
3818 5683 5.462068 CGTACATGTTTCTGACTTGTTCTGA 59.538 40.000 2.30 0.00 42.16 3.27
3821 5686 5.652744 ACGTACATGTTTCTGACTTGTTC 57.347 39.130 2.30 0.00 42.16 3.18
3839 5704 1.483316 CGTGACAGTGCAAGAACGTA 58.517 50.000 0.00 0.00 0.00 3.57
3880 5745 7.390996 CAGTAGTATTGTATACTCCTCGTCCAT 59.609 40.741 4.17 0.00 29.77 3.41
3881 5746 6.709397 CAGTAGTATTGTATACTCCTCGTCCA 59.291 42.308 4.17 0.00 29.77 4.02
3882 5747 6.709846 ACAGTAGTATTGTATACTCCTCGTCC 59.290 42.308 4.17 0.00 29.77 4.79
3884 5749 8.428063 AGTACAGTAGTATTGTATACTCCTCGT 58.572 37.037 8.57 2.71 33.92 4.18
3885 5750 8.830201 AGTACAGTAGTATTGTATACTCCTCG 57.170 38.462 8.57 0.00 33.92 4.63
3886 5751 9.775854 TGAGTACAGTAGTATTGTATACTCCTC 57.224 37.037 18.67 14.74 35.07 3.71
3909 5774 5.005299 TCGCACACGTAATTAACATGATGAG 59.995 40.000 0.00 0.00 41.18 2.90
3925 5796 0.666274 TCTTAGCCAACTCGCACACG 60.666 55.000 0.00 0.00 42.01 4.49
3936 5807 5.126061 GCCTTTTCAATCAAGATCTTAGCCA 59.874 40.000 7.86 0.00 0.00 4.75
3940 5811 5.354234 GTCCGCCTTTTCAATCAAGATCTTA 59.646 40.000 7.86 0.00 0.00 2.10
3963 5847 0.467290 ACCATGGCCACGAAAACAGT 60.467 50.000 8.16 0.00 0.00 3.55
3976 5866 3.554324 CGACGTGGAACTAATAACCATGG 59.446 47.826 11.19 11.19 42.79 3.66
3978 5868 4.724074 TCGACGTGGAACTAATAACCAT 57.276 40.909 0.00 0.00 36.09 3.55
3984 5874 4.196626 TCCAAATCGACGTGGAACTAAT 57.803 40.909 14.94 0.00 41.02 1.73
3986 5876 3.517602 CATCCAAATCGACGTGGAACTA 58.482 45.455 19.78 1.24 46.78 2.24
3988 5878 1.396996 CCATCCAAATCGACGTGGAAC 59.603 52.381 19.78 0.00 46.78 3.62
3999 5889 4.026052 GTTCCAACTCCATCCATCCAAAT 58.974 43.478 0.00 0.00 0.00 2.32
4001 5891 2.649312 AGTTCCAACTCCATCCATCCAA 59.351 45.455 0.00 0.00 32.86 3.53
4004 5894 2.939103 CGAAGTTCCAACTCCATCCATC 59.061 50.000 0.00 0.00 38.57 3.51
4005 5895 2.305927 ACGAAGTTCCAACTCCATCCAT 59.694 45.455 0.00 0.00 37.78 3.41
4008 5898 4.330074 CACATACGAAGTTCCAACTCCATC 59.670 45.833 0.00 0.00 37.78 3.51
4009 5899 4.253685 CACATACGAAGTTCCAACTCCAT 58.746 43.478 0.00 0.00 37.78 3.41
4010 5900 3.070446 ACACATACGAAGTTCCAACTCCA 59.930 43.478 0.00 0.00 37.78 3.86
4011 5901 3.660865 ACACATACGAAGTTCCAACTCC 58.339 45.455 0.00 0.00 37.78 3.85
4012 5902 6.149504 GTAACACATACGAAGTTCCAACTC 57.850 41.667 0.00 0.00 37.78 3.01
4061 5951 9.893305 CACGGTTCTGAGAAATTAATTAAACTT 57.107 29.630 1.21 0.00 0.00 2.66
4062 5952 8.512138 CCACGGTTCTGAGAAATTAATTAAACT 58.488 33.333 1.21 2.73 0.00 2.66
4063 5953 8.294577 ACCACGGTTCTGAGAAATTAATTAAAC 58.705 33.333 1.21 0.00 0.00 2.01
4064 5954 8.398878 ACCACGGTTCTGAGAAATTAATTAAA 57.601 30.769 1.21 0.00 0.00 1.52
4065 5955 7.989416 ACCACGGTTCTGAGAAATTAATTAA 57.011 32.000 0.01 0.00 0.00 1.40
4066 5956 8.316214 AGTACCACGGTTCTGAGAAATTAATTA 58.684 33.333 0.01 0.00 0.00 1.40
4067 5957 7.119262 CAGTACCACGGTTCTGAGAAATTAATT 59.881 37.037 15.62 0.00 43.26 1.40
4068 5958 6.594159 CAGTACCACGGTTCTGAGAAATTAAT 59.406 38.462 15.62 0.00 43.26 1.40
4069 5959 5.929992 CAGTACCACGGTTCTGAGAAATTAA 59.070 40.000 15.62 0.00 43.26 1.40
4070 5960 5.475719 CAGTACCACGGTTCTGAGAAATTA 58.524 41.667 15.62 0.00 43.26 1.40
4071 5961 4.315803 CAGTACCACGGTTCTGAGAAATT 58.684 43.478 15.62 0.00 43.26 1.82
4072 5962 3.864921 GCAGTACCACGGTTCTGAGAAAT 60.865 47.826 22.67 0.00 43.26 2.17
4073 5963 2.547218 GCAGTACCACGGTTCTGAGAAA 60.547 50.000 22.67 0.00 43.26 2.52
4074 5964 1.000506 GCAGTACCACGGTTCTGAGAA 59.999 52.381 22.67 0.00 43.26 2.87
4075 5965 0.601558 GCAGTACCACGGTTCTGAGA 59.398 55.000 22.67 0.00 43.26 3.27
4076 5966 0.317160 TGCAGTACCACGGTTCTGAG 59.683 55.000 22.67 2.18 43.26 3.35
4077 5967 0.032952 GTGCAGTACCACGGTTCTGA 59.967 55.000 22.67 8.40 43.26 3.27
4078 5968 2.528797 GTGCAGTACCACGGTTCTG 58.471 57.895 16.20 16.20 43.39 3.02
4095 5985 7.280652 CCACAAATTGACAAAAGATTTTCAGGT 59.719 33.333 0.00 0.00 0.00 4.00
4104 5994 2.223923 CCCGCCACAAATTGACAAAAGA 60.224 45.455 0.00 0.00 0.00 2.52
4106 5996 1.757118 TCCCGCCACAAATTGACAAAA 59.243 42.857 0.00 0.00 0.00 2.44
4108 5998 1.067821 GTTCCCGCCACAAATTGACAA 59.932 47.619 0.00 0.00 0.00 3.18
4112 6002 0.958091 TCTGTTCCCGCCACAAATTG 59.042 50.000 0.00 0.00 0.00 2.32
4135 6025 1.227089 CTCCTTGAGGCGATCACCG 60.227 63.158 0.00 0.00 37.77 4.94
4271 6161 9.710818 ACCTGATTAAGTACTCCTATAAGACAA 57.289 33.333 0.00 0.00 0.00 3.18
4301 6193 9.374838 GATCATTAAAACATGAAGCCATTTTCT 57.625 29.630 0.00 0.00 36.74 2.52
4335 6227 3.810386 TGCATGCAAGTAAAGACACGTAA 59.190 39.130 20.30 0.00 0.00 3.18
4336 6228 3.394719 TGCATGCAAGTAAAGACACGTA 58.605 40.909 20.30 0.00 0.00 3.57
4337 6229 2.217750 TGCATGCAAGTAAAGACACGT 58.782 42.857 20.30 0.00 0.00 4.49
4338 6230 2.413239 CCTGCATGCAAGTAAAGACACG 60.413 50.000 22.88 5.00 0.00 4.49
4339 6231 2.554032 ACCTGCATGCAAGTAAAGACAC 59.446 45.455 20.28 0.00 0.00 3.67
4341 6233 2.162408 GGACCTGCATGCAAGTAAAGAC 59.838 50.000 21.57 8.99 0.00 3.01
4342 6234 2.436417 GGACCTGCATGCAAGTAAAGA 58.564 47.619 21.57 0.00 0.00 2.52
4343 6235 1.474077 GGGACCTGCATGCAAGTAAAG 59.526 52.381 21.57 8.61 0.00 1.85
4344 6236 1.075374 AGGGACCTGCATGCAAGTAAA 59.925 47.619 21.57 0.00 0.00 2.01
4345 6237 0.698238 AGGGACCTGCATGCAAGTAA 59.302 50.000 21.57 0.00 0.00 2.24
4346 6238 1.578897 TAGGGACCTGCATGCAAGTA 58.421 50.000 21.57 3.70 0.00 2.24
4348 6240 1.679680 CATTAGGGACCTGCATGCAAG 59.320 52.381 22.88 18.73 0.00 4.01
4349 6241 1.685803 CCATTAGGGACCTGCATGCAA 60.686 52.381 22.88 4.14 40.01 4.08
4412 6304 5.452917 GCCGACCTTACTGTTCCTGTATATT 60.453 44.000 0.00 0.00 0.00 1.28
4413 6305 4.038883 GCCGACCTTACTGTTCCTGTATAT 59.961 45.833 0.00 0.00 0.00 0.86
4450 6342 2.094026 TCATATGCTGCTTCGTCACTGT 60.094 45.455 0.00 0.00 0.00 3.55
4520 6412 0.250793 AAACACGGGCGGATACATCA 59.749 50.000 0.00 0.00 0.00 3.07
4530 6422 2.554893 TCCAAATTCACTAAACACGGGC 59.445 45.455 0.00 0.00 0.00 6.13
4532 6424 3.495377 TCGTCCAAATTCACTAAACACGG 59.505 43.478 0.00 0.00 0.00 4.94
4545 6437 6.759827 AGTATATTTTAGCACGTCGTCCAAAT 59.240 34.615 0.00 0.83 0.00 2.32
4548 6440 5.038683 CAGTATATTTTAGCACGTCGTCCA 58.961 41.667 0.00 0.00 0.00 4.02
4550 6442 4.738740 AGCAGTATATTTTAGCACGTCGTC 59.261 41.667 0.00 0.00 0.00 4.20
4555 6447 6.695713 TCACTACAGCAGTATATTTTAGCACG 59.304 38.462 0.00 0.00 34.98 5.34
4560 6452 9.884636 ACACAATCACTACAGCAGTATATTTTA 57.115 29.630 0.00 0.00 34.98 1.52
4561 6453 8.792830 ACACAATCACTACAGCAGTATATTTT 57.207 30.769 0.00 0.00 34.98 1.82
4571 6464 9.277565 CACATAATTTTACACAATCACTACAGC 57.722 33.333 0.00 0.00 0.00 4.40
4597 6490 9.696917 AAAATGGATTTCACTCTACAAAACATC 57.303 29.630 0.00 0.00 0.00 3.06
4629 6522 9.535878 GCTAGCTTTACAAATATCAAGTAGAGT 57.464 33.333 7.70 0.00 0.00 3.24
4659 6552 8.607441 TCCGATGAAAACTGATAAATGGATAG 57.393 34.615 0.00 0.00 0.00 2.08
4682 6576 7.380333 CGAAACTTTTGTTAAACAGGGTAATCC 59.620 37.037 0.00 0.00 42.67 3.01
4685 6579 6.035217 GCGAAACTTTTGTTAAACAGGGTAA 58.965 36.000 0.00 0.00 42.67 2.85
4692 6586 7.285069 ACAAACTTGCGAAACTTTTGTTAAAC 58.715 30.769 5.58 0.00 42.67 2.01
4767 6661 7.554476 GCCACCTAGAAGATCACTCTTAAATTT 59.446 37.037 2.97 0.00 41.87 1.82
4769 6663 6.408662 GGCCACCTAGAAGATCACTCTTAAAT 60.409 42.308 0.00 0.00 41.87 1.40
4793 6687 2.494059 CATATACCAAACGGCTGAGGG 58.506 52.381 0.00 0.00 0.00 4.30
4797 6691 0.586319 CGCCATATACCAAACGGCTG 59.414 55.000 0.00 0.00 40.72 4.85
4820 6714 3.193471 GGTGGAAAACCGCAATGTG 57.807 52.632 0.00 0.00 39.81 3.21
4836 6730 5.697082 TGTACGGGGAAAATATACAAGGT 57.303 39.130 0.00 0.00 0.00 3.50
4855 6749 1.337071 GGAAGCGAGTCGATCCATGTA 59.663 52.381 24.64 0.00 35.50 2.29
4856 6750 0.103208 GGAAGCGAGTCGATCCATGT 59.897 55.000 24.64 2.52 35.50 3.21
4872 6766 3.326588 TGAGCACAACTTAGCTTAGGGAA 59.673 43.478 4.52 0.00 42.04 3.97
4876 6770 3.873952 GGGATGAGCACAACTTAGCTTAG 59.126 47.826 0.00 0.00 42.04 2.18
4890 6784 2.700773 GCGGGTGTTTGGGATGAGC 61.701 63.158 0.00 0.00 0.00 4.26
4944 6844 2.433145 CGGTCGTCAGCTGCACAT 60.433 61.111 9.47 0.00 0.00 3.21
4948 6848 2.749110 TTCTCACGGTCGTCAGCTGC 62.749 60.000 9.47 3.23 0.00 5.25
4972 6872 7.038445 AGCCTAATAGCATAGTCAGACATGAAT 60.038 37.037 13.94 6.41 33.99 2.57
4973 6873 6.268617 AGCCTAATAGCATAGTCAGACATGAA 59.731 38.462 13.94 4.89 33.99 2.57
4987 6887 3.000041 CACACGAACAAGCCTAATAGCA 59.000 45.455 0.00 0.00 34.23 3.49
4994 6894 1.940613 GTTCTTCACACGAACAAGCCT 59.059 47.619 0.00 0.00 40.27 4.58
5025 6925 3.836949 ACATGTCATGCCATCGTTTTTC 58.163 40.909 12.91 0.00 0.00 2.29
5060 6960 2.237392 AGAGCAACTATGGGTCCTGTTC 59.763 50.000 0.00 0.00 33.37 3.18
5073 6973 9.077885 TCCTTTATAAATGTTTTGAGAGCAACT 57.922 29.630 0.00 0.00 32.79 3.16
5152 7052 6.151663 ACCCTTTACTTTGCATTTTTACGT 57.848 33.333 0.00 0.00 0.00 3.57
5203 7104 9.013490 GTTCACAGTTTTTATGCATGATCATAC 57.987 33.333 10.16 2.98 0.00 2.39
5279 7180 9.008965 ACATTAGTAAAGATGTTGCAATGTACA 57.991 29.630 0.59 0.00 34.53 2.90
5280 7181 9.840427 AACATTAGTAAAGATGTTGCAATGTAC 57.160 29.630 0.59 0.00 42.96 2.90
5365 7294 0.691078 ATGACGTAGGCCCACAGGAT 60.691 55.000 0.00 0.00 33.47 3.24
5369 7298 0.821517 CTGTATGACGTAGGCCCACA 59.178 55.000 0.00 0.00 0.00 4.17
5371 7300 2.440517 TACTGTATGACGTAGGCCCA 57.559 50.000 0.00 0.00 0.00 5.36
5398 7327 5.059161 TGTAGTACTACTGTATGGCGTAGG 58.941 45.833 28.56 0.00 37.90 3.18
5399 7328 5.757320 ACTGTAGTACTACTGTATGGCGTAG 59.243 44.000 32.28 20.09 43.35 3.51
5400 7329 5.674525 ACTGTAGTACTACTGTATGGCGTA 58.325 41.667 32.28 11.53 43.35 4.42
5401 7330 4.521146 ACTGTAGTACTACTGTATGGCGT 58.479 43.478 32.28 14.52 43.35 5.68
5402 7331 5.178996 CCTACTGTAGTACTACTGTATGGCG 59.821 48.000 34.35 26.59 44.07 5.69
5403 7332 5.048852 GCCTACTGTAGTACTACTGTATGGC 60.049 48.000 36.71 36.71 44.07 4.40
5404 7333 5.178996 CGCCTACTGTAGTACTACTGTATGG 59.821 48.000 34.35 32.98 44.07 2.74
5405 7334 5.178996 CCGCCTACTGTAGTACTACTGTATG 59.821 48.000 34.35 32.02 44.07 2.39
5406 7335 5.303971 CCGCCTACTGTAGTACTACTGTAT 58.696 45.833 34.35 22.08 44.07 2.29
5407 7336 4.443457 CCCGCCTACTGTAGTACTACTGTA 60.443 50.000 33.08 33.08 43.35 2.74
5408 7337 3.539604 CCGCCTACTGTAGTACTACTGT 58.460 50.000 34.04 34.04 45.73 3.55
5409 7338 2.877168 CCCGCCTACTGTAGTACTACTG 59.123 54.545 28.53 28.53 39.79 2.74
5410 7339 2.507471 ACCCGCCTACTGTAGTACTACT 59.493 50.000 28.56 15.37 37.00 2.57
5411 7340 2.924421 ACCCGCCTACTGTAGTACTAC 58.076 52.381 23.58 23.58 36.63 2.73
5412 7341 3.652057 AACCCGCCTACTGTAGTACTA 57.348 47.619 13.42 0.00 0.00 1.82
5413 7342 2.521547 AACCCGCCTACTGTAGTACT 57.478 50.000 13.42 0.00 0.00 2.73
5414 7343 3.194329 AGAAAACCCGCCTACTGTAGTAC 59.806 47.826 13.42 4.83 0.00 2.73
5415 7344 3.434309 AGAAAACCCGCCTACTGTAGTA 58.566 45.455 13.42 0.00 0.00 1.82
5416 7345 2.254508 AGAAAACCCGCCTACTGTAGT 58.745 47.619 13.42 0.00 0.00 2.73
5417 7346 4.667519 ATAGAAAACCCGCCTACTGTAG 57.332 45.455 7.87 7.87 0.00 2.74
5418 7347 5.425196 AAATAGAAAACCCGCCTACTGTA 57.575 39.130 0.00 0.00 0.00 2.74
5419 7348 3.994931 AATAGAAAACCCGCCTACTGT 57.005 42.857 0.00 0.00 0.00 3.55
5420 7349 5.414765 AGAAAAATAGAAAACCCGCCTACTG 59.585 40.000 0.00 0.00 0.00 2.74
5421 7350 5.567430 AGAAAAATAGAAAACCCGCCTACT 58.433 37.500 0.00 0.00 0.00 2.57
5422 7351 5.892160 AGAAAAATAGAAAACCCGCCTAC 57.108 39.130 0.00 0.00 0.00 3.18
5423 7352 6.904463 AAAGAAAAATAGAAAACCCGCCTA 57.096 33.333 0.00 0.00 0.00 3.93
5424 7353 5.801531 AAAGAAAAATAGAAAACCCGCCT 57.198 34.783 0.00 0.00 0.00 5.52
5425 7354 5.756347 ACAAAAGAAAAATAGAAAACCCGCC 59.244 36.000 0.00 0.00 0.00 6.13
5426 7355 6.256975 ACACAAAAGAAAAATAGAAAACCCGC 59.743 34.615 0.00 0.00 0.00 6.13
5427 7356 7.042992 GGACACAAAAGAAAAATAGAAAACCCG 60.043 37.037 0.00 0.00 0.00 5.28
5428 7357 7.766738 TGGACACAAAAGAAAAATAGAAAACCC 59.233 33.333 0.00 0.00 0.00 4.11
5429 7358 8.710835 TGGACACAAAAGAAAAATAGAAAACC 57.289 30.769 0.00 0.00 0.00 3.27
5456 7385 9.817809 AATGCACTCGAGTATTATAGAGAAAAA 57.182 29.630 19.57 0.00 34.98 1.94
5457 7386 9.817809 AAATGCACTCGAGTATTATAGAGAAAA 57.182 29.630 19.57 0.00 34.98 2.29
5458 7387 9.817809 AAAATGCACTCGAGTATTATAGAGAAA 57.182 29.630 19.57 0.00 34.98 2.52
5459 7388 9.817809 AAAAATGCACTCGAGTATTATAGAGAA 57.182 29.630 19.57 0.00 34.98 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.