Multiple sequence alignment - TraesCS5B01G035000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G035000 chr5B 100.000 4542 0 0 1 4542 38161207 38156666 0.000000e+00 8388.0
1 TraesCS5B01G035000 chr5B 85.747 884 119 4 2598 3475 38134793 38133911 0.000000e+00 928.0
2 TraesCS5B01G035000 chr5B 85.585 881 126 1 2596 3475 38050600 38049720 0.000000e+00 922.0
3 TraesCS5B01G035000 chr5B 78.736 1044 206 10 2429 3470 684001700 684000671 0.000000e+00 684.0
4 TraesCS5B01G035000 chr5B 79.290 507 93 8 2079 2579 38133157 38132657 1.210000e-90 344.0
5 TraesCS5B01G035000 chr5B 80.723 332 59 3 2068 2399 38147709 38147383 2.100000e-63 254.0
6 TraesCS5B01G035000 chr5B 78.481 158 30 2 667 821 38150640 38150484 2.890000e-17 100.0
7 TraesCS5B01G035000 chr5D 96.658 1975 58 4 1 1971 42929408 42931378 0.000000e+00 3275.0
8 TraesCS5B01G035000 chr5D 96.854 1462 46 0 2065 3526 42931377 42932838 0.000000e+00 2446.0
9 TraesCS5B01G035000 chr5D 84.395 1397 211 7 2078 3469 42951720 42953114 0.000000e+00 1365.0
10 TraesCS5B01G035000 chr5D 87.441 1059 133 0 2411 3469 42946003 42947061 0.000000e+00 1219.0
11 TraesCS5B01G035000 chr5D 78.632 1053 210 9 2418 3470 541953513 541952476 0.000000e+00 684.0
12 TraesCS5B01G035000 chr5D 89.130 368 39 1 4170 4537 116032724 116032358 1.490000e-124 457.0
13 TraesCS5B01G035000 chr5D 81.834 567 50 21 3642 4169 42934168 42934720 1.170000e-115 427.0
14 TraesCS5B01G035000 chr5D 81.562 320 52 5 2065 2383 42945628 42945941 1.620000e-64 257.0
15 TraesCS5B01G035000 chr5D 91.489 94 6 2 1974 2066 205794738 205794646 1.330000e-25 128.0
16 TraesCS5B01G035000 chr5D 82.203 118 4 8 3524 3641 42932884 42932984 8.100000e-13 86.1
17 TraesCS5B01G035000 chr5A 94.997 1979 76 8 1 1971 32709480 32711443 0.000000e+00 3085.0
18 TraesCS5B01G035000 chr5A 95.417 1462 65 1 2065 3526 32711442 32712901 0.000000e+00 2327.0
19 TraesCS5B01G035000 chr5A 85.396 493 72 0 2977 3469 32735561 32736053 3.130000e-141 512.0
20 TraesCS5B01G035000 chr5A 90.083 121 5 3 3524 3644 32712947 32713060 2.830000e-32 150.0
21 TraesCS5B01G035000 chr5A 77.536 138 28 3 667 803 32724193 32724328 3.770000e-11 80.5
22 TraesCS5B01G035000 chr4A 79.885 1039 192 10 2418 3455 627357355 627358377 0.000000e+00 745.0
23 TraesCS5B01G035000 chr4A 72.727 715 172 18 1112 1822 627360366 627361061 7.650000e-53 219.0
24 TraesCS5B01G035000 chr7D 88.000 375 43 2 4170 4542 453170147 453170521 4.170000e-120 442.0
25 TraesCS5B01G035000 chr1B 87.903 372 43 2 4172 4542 139117372 139117742 1.940000e-118 436.0
26 TraesCS5B01G035000 chr1B 86.863 373 48 1 4170 4542 65744339 65743968 2.530000e-112 416.0
27 TraesCS5B01G035000 chr1B 86.327 373 50 1 4170 4542 117375503 117375874 5.470000e-109 405.0
28 TraesCS5B01G035000 chr6D 87.701 374 44 2 4170 4542 390168906 390169278 6.980000e-118 435.0
29 TraesCS5B01G035000 chr6D 87.166 374 44 4 4170 4542 414147319 414147689 5.430000e-114 422.0
30 TraesCS5B01G035000 chr6D 86.898 374 46 3 4170 4542 224569952 224569581 2.530000e-112 416.0
31 TraesCS5B01G035000 chr6D 89.109 101 9 2 1967 2066 91559531 91559630 1.720000e-24 124.0
32 TraesCS5B01G035000 chr1A 86.667 375 46 4 4170 4542 147626686 147626314 3.270000e-111 412.0
33 TraesCS5B01G035000 chr1A 88.462 104 8 3 1967 2068 238655886 238655785 6.170000e-24 122.0
34 TraesCS5B01G035000 chr3A 82.083 240 42 1 3931 4170 515588585 515588347 2.140000e-48 204.0
35 TraesCS5B01G035000 chrUn 91.753 97 4 3 1974 2068 21636678 21636772 1.030000e-26 132.0
36 TraesCS5B01G035000 chr2B 90.816 98 6 3 1974 2069 719528568 719528664 1.330000e-25 128.0
37 TraesCS5B01G035000 chr6B 87.963 108 8 4 1974 2078 233991969 233992074 6.170000e-24 122.0
38 TraesCS5B01G035000 chr4B 87.387 111 9 4 1970 2077 220816751 220816643 6.170000e-24 122.0
39 TraesCS5B01G035000 chr3B 88.462 104 8 3 1974 2075 677753327 677753428 6.170000e-24 122.0
40 TraesCS5B01G035000 chr3B 87.156 109 9 4 1974 2079 395075338 395075232 7.980000e-23 119.0
41 TraesCS5B01G035000 chr3D 90.196 51 5 0 3180 3230 17514058 17514008 2.930000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G035000 chr5B 38156666 38161207 4541 True 8388.000 8388 100.00000 1 4542 1 chr5B.!!$R2 4541
1 TraesCS5B01G035000 chr5B 38049720 38050600 880 True 922.000 922 85.58500 2596 3475 1 chr5B.!!$R1 879
2 TraesCS5B01G035000 chr5B 684000671 684001700 1029 True 684.000 684 78.73600 2429 3470 1 chr5B.!!$R3 1041
3 TraesCS5B01G035000 chr5B 38132657 38134793 2136 True 636.000 928 82.51850 2079 3475 2 chr5B.!!$R4 1396
4 TraesCS5B01G035000 chr5D 42929408 42934720 5312 False 1558.525 3275 89.38725 1 4169 4 chr5D.!!$F2 4168
5 TraesCS5B01G035000 chr5D 42951720 42953114 1394 False 1365.000 1365 84.39500 2078 3469 1 chr5D.!!$F1 1391
6 TraesCS5B01G035000 chr5D 42945628 42947061 1433 False 738.000 1219 84.50150 2065 3469 2 chr5D.!!$F3 1404
7 TraesCS5B01G035000 chr5D 541952476 541953513 1037 True 684.000 684 78.63200 2418 3470 1 chr5D.!!$R3 1052
8 TraesCS5B01G035000 chr5A 32709480 32713060 3580 False 1854.000 3085 93.49900 1 3644 3 chr5A.!!$F3 3643
9 TraesCS5B01G035000 chr4A 627357355 627361061 3706 False 482.000 745 76.30600 1112 3455 2 chr4A.!!$F1 2343

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.321298 TAGCTTCAGTTCGGTTGGGC 60.321 55.000 0.0 0.0 0.00 5.36 F
556 570 1.124839 GTCGTTTTAGCCCGTTGTACG 59.875 52.381 0.0 0.0 42.11 3.67 F
1985 2006 0.044092 TCATAGCCCCTCTGTCCCAA 59.956 55.000 0.0 0.0 0.00 4.12 F
2066 2087 0.392595 CTTTTGGGCGGAGGGAGTAC 60.393 60.000 0.0 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1368 1389 1.065851 TCGTTATTGCTCGCCGATACA 59.934 47.619 0.00 0.00 0.0 2.29 R
2050 2071 0.031917 TATGTACTCCCTCCGCCCAA 60.032 55.000 0.00 0.00 0.0 4.12 R
2989 3052 0.802494 AAATTGTGCGGGATGTCGAC 59.198 50.000 9.11 9.11 0.0 4.20 R
3999 7352 0.107017 CAACAGATGGCCGGATCCTT 60.107 55.000 5.05 0.00 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.321298 TAGCTTCAGTTCGGTTGGGC 60.321 55.000 0.00 0.00 0.00 5.36
185 186 5.366477 ACAATTTCTGGGAATTGAACTGGTT 59.634 36.000 18.01 0.00 45.47 3.67
186 187 4.935352 TTTCTGGGAATTGAACTGGTTG 57.065 40.909 0.00 0.00 0.00 3.77
188 189 4.177537 TCTGGGAATTGAACTGGTTGAA 57.822 40.909 0.00 0.00 0.00 2.69
236 237 9.535270 CATAAGAAAATTCGTCTTGAAGACTTC 57.465 33.333 21.61 17.00 42.92 3.01
275 276 8.573885 TGTAGAGCTATACAACGTATGCTATTT 58.426 33.333 18.54 4.51 32.80 1.40
279 280 9.408069 GAGCTATACAACGTATGCTATTTTACT 57.592 33.333 0.00 0.00 0.00 2.24
280 281 9.760077 AGCTATACAACGTATGCTATTTTACTT 57.240 29.630 0.00 0.00 0.00 2.24
284 285 9.811995 ATACAACGTATGCTATTTTACTTCTGA 57.188 29.630 0.00 0.00 0.00 3.27
285 286 8.718102 ACAACGTATGCTATTTTACTTCTGAT 57.282 30.769 0.00 0.00 0.00 2.90
286 287 9.162764 ACAACGTATGCTATTTTACTTCTGATT 57.837 29.630 0.00 0.00 0.00 2.57
362 373 4.910458 ACCCTAGTTATATGATGGGCAC 57.090 45.455 0.00 0.00 38.23 5.01
386 397 8.074370 CACGATCCGAGTTAACTAGATAATTCA 58.926 37.037 16.38 0.00 0.00 2.57
513 527 2.017049 AGATGTGCTTAATTGGGACGC 58.983 47.619 0.00 0.00 0.00 5.19
556 570 1.124839 GTCGTTTTAGCCCGTTGTACG 59.875 52.381 0.00 0.00 42.11 3.67
609 623 9.521503 TCTGACATCTAACAAGAGAATTATTCG 57.478 33.333 0.00 0.00 34.02 3.34
737 751 4.275443 CCTACTACCTAGCTAGTCAAACCG 59.725 50.000 19.31 4.82 0.00 4.44
968 989 1.224075 CCTCAGCACACTCAACACAG 58.776 55.000 0.00 0.00 0.00 3.66
1058 1079 4.395231 GGTTGTAATGCTCTACCTGAAACC 59.605 45.833 0.00 0.00 0.00 3.27
1125 1146 2.205462 ATATCCCTGGCGCTCCCT 59.795 61.111 7.64 0.00 0.00 4.20
1143 1164 3.958860 GGCTGCCCTGACAGGTGT 61.959 66.667 20.24 0.00 38.16 4.16
1638 1659 4.868195 GCCTTCAATGTGGCGTTC 57.132 55.556 4.62 0.00 39.71 3.95
1840 1861 3.127895 GGAGCAAATAAACCACGCATGTA 59.872 43.478 0.00 0.00 0.00 2.29
1872 1893 0.109689 GTTACTGCGAGAGTGCGAGT 60.110 55.000 0.00 0.00 35.96 4.18
1875 1896 0.109689 ACTGCGAGAGTGCGAGTAAC 60.110 55.000 0.00 0.00 37.81 2.50
1912 1933 0.395724 CCATTGCTCCCCTGGTTACC 60.396 60.000 0.00 0.00 0.00 2.85
1971 1992 8.619546 GGTAACTACTGTACTTGTAGGTCATAG 58.380 40.741 21.66 6.64 41.03 2.23
1972 1993 6.696441 ACTACTGTACTTGTAGGTCATAGC 57.304 41.667 21.66 0.00 41.03 2.97
1973 1994 5.593502 ACTACTGTACTTGTAGGTCATAGCC 59.406 44.000 21.66 0.00 41.03 3.93
1974 1995 3.705072 ACTGTACTTGTAGGTCATAGCCC 59.295 47.826 0.00 0.00 0.00 5.19
1975 1996 3.036091 TGTACTTGTAGGTCATAGCCCC 58.964 50.000 0.00 0.00 0.00 5.80
1976 1997 2.570386 ACTTGTAGGTCATAGCCCCT 57.430 50.000 0.00 0.00 34.74 4.79
1977 1998 2.399580 ACTTGTAGGTCATAGCCCCTC 58.600 52.381 0.00 0.00 32.08 4.30
1978 1999 2.022918 ACTTGTAGGTCATAGCCCCTCT 60.023 50.000 0.00 0.00 32.08 3.69
1979 2000 2.088104 TGTAGGTCATAGCCCCTCTG 57.912 55.000 0.00 0.00 32.08 3.35
1980 2001 1.291033 TGTAGGTCATAGCCCCTCTGT 59.709 52.381 0.00 0.00 32.08 3.41
1981 2002 1.964933 GTAGGTCATAGCCCCTCTGTC 59.035 57.143 0.00 0.00 32.08 3.51
1982 2003 0.399233 AGGTCATAGCCCCTCTGTCC 60.399 60.000 0.00 0.00 0.00 4.02
1983 2004 1.411651 GGTCATAGCCCCTCTGTCCC 61.412 65.000 0.00 0.00 0.00 4.46
1984 2005 0.691078 GTCATAGCCCCTCTGTCCCA 60.691 60.000 0.00 0.00 0.00 4.37
1985 2006 0.044092 TCATAGCCCCTCTGTCCCAA 59.956 55.000 0.00 0.00 0.00 4.12
1986 2007 0.918983 CATAGCCCCTCTGTCCCAAA 59.081 55.000 0.00 0.00 0.00 3.28
1987 2008 1.284785 CATAGCCCCTCTGTCCCAAAA 59.715 52.381 0.00 0.00 0.00 2.44
1988 2009 1.681229 TAGCCCCTCTGTCCCAAAAT 58.319 50.000 0.00 0.00 0.00 1.82
1989 2010 1.681229 AGCCCCTCTGTCCCAAAATA 58.319 50.000 0.00 0.00 0.00 1.40
1990 2011 2.000048 AGCCCCTCTGTCCCAAAATAA 59.000 47.619 0.00 0.00 0.00 1.40
1991 2012 2.024941 AGCCCCTCTGTCCCAAAATAAG 60.025 50.000 0.00 0.00 0.00 1.73
1992 2013 2.291605 GCCCCTCTGTCCCAAAATAAGT 60.292 50.000 0.00 0.00 0.00 2.24
1993 2014 3.356290 CCCCTCTGTCCCAAAATAAGTG 58.644 50.000 0.00 0.00 0.00 3.16
1994 2015 3.245264 CCCCTCTGTCCCAAAATAAGTGT 60.245 47.826 0.00 0.00 0.00 3.55
1995 2016 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
1996 2017 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
1997 2018 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
1998 2019 5.513094 CCTCTGTCCCAAAATAAGTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
1999 2020 5.935945 TCTGTCCCAAAATAAGTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
2000 2021 5.997746 TCTGTCCCAAAATAAGTGTCTCAAG 59.002 40.000 0.00 0.00 0.00 3.02
2001 2022 5.690865 TGTCCCAAAATAAGTGTCTCAAGT 58.309 37.500 0.00 0.00 0.00 3.16
2002 2023 6.833041 TGTCCCAAAATAAGTGTCTCAAGTA 58.167 36.000 0.00 0.00 0.00 2.24
2003 2024 7.458397 TGTCCCAAAATAAGTGTCTCAAGTAT 58.542 34.615 0.00 0.00 0.00 2.12
2004 2025 8.598916 TGTCCCAAAATAAGTGTCTCAAGTATA 58.401 33.333 0.00 0.00 0.00 1.47
2005 2026 9.099454 GTCCCAAAATAAGTGTCTCAAGTATAG 57.901 37.037 0.00 0.00 0.00 1.31
2006 2027 8.822805 TCCCAAAATAAGTGTCTCAAGTATAGT 58.177 33.333 0.00 0.00 0.00 2.12
2040 2061 9.944663 TTATGCTAAAGTTTGTACAAAGTTGAG 57.055 29.630 32.23 32.23 41.57 3.02
2041 2062 7.618502 TGCTAAAGTTTGTACAAAGTTGAGA 57.381 32.000 36.80 25.55 41.56 3.27
2042 2063 7.469260 TGCTAAAGTTTGTACAAAGTTGAGAC 58.531 34.615 36.80 29.86 41.56 3.36
2043 2064 7.119992 TGCTAAAGTTTGTACAAAGTTGAGACA 59.880 33.333 36.80 31.23 41.56 3.41
2044 2065 7.428472 GCTAAAGTTTGTACAAAGTTGAGACAC 59.572 37.037 36.80 24.11 41.56 3.67
2045 2066 7.448748 AAAGTTTGTACAAAGTTGAGACACT 57.551 32.000 31.97 17.04 41.57 3.55
2046 2067 7.448748 AAGTTTGTACAAAGTTGAGACACTT 57.551 32.000 31.18 20.43 41.07 3.16
2047 2068 7.073342 AGTTTGTACAAAGTTGAGACACTTC 57.927 36.000 21.12 5.12 35.87 3.01
2048 2069 6.879458 AGTTTGTACAAAGTTGAGACACTTCT 59.121 34.615 21.12 7.27 35.87 2.85
2049 2070 7.390718 AGTTTGTACAAAGTTGAGACACTTCTT 59.609 33.333 21.12 0.00 35.87 2.52
2050 2071 7.681939 TTGTACAAAGTTGAGACACTTCTTT 57.318 32.000 5.64 0.00 35.87 2.52
2051 2072 7.681939 TGTACAAAGTTGAGACACTTCTTTT 57.318 32.000 0.00 0.00 35.87 2.27
2052 2073 7.526608 TGTACAAAGTTGAGACACTTCTTTTG 58.473 34.615 0.00 0.00 35.87 2.44
2053 2074 5.954335 ACAAAGTTGAGACACTTCTTTTGG 58.046 37.500 0.00 0.00 35.87 3.28
2054 2075 5.105756 ACAAAGTTGAGACACTTCTTTTGGG 60.106 40.000 0.00 0.00 35.87 4.12
2055 2076 2.952310 AGTTGAGACACTTCTTTTGGGC 59.048 45.455 0.00 0.00 29.47 5.36
2056 2077 1.593196 TGAGACACTTCTTTTGGGCG 58.407 50.000 0.00 0.00 29.47 6.13
2057 2078 0.875059 GAGACACTTCTTTTGGGCGG 59.125 55.000 0.00 0.00 29.47 6.13
2058 2079 0.472471 AGACACTTCTTTTGGGCGGA 59.528 50.000 0.00 0.00 0.00 5.54
2059 2080 0.875059 GACACTTCTTTTGGGCGGAG 59.125 55.000 0.00 0.00 0.00 4.63
2060 2081 0.537371 ACACTTCTTTTGGGCGGAGG 60.537 55.000 0.00 0.00 0.00 4.30
2061 2082 1.074951 ACTTCTTTTGGGCGGAGGG 59.925 57.895 0.00 0.00 0.00 4.30
2062 2083 1.378762 CTTCTTTTGGGCGGAGGGA 59.621 57.895 0.00 0.00 0.00 4.20
2063 2084 0.678048 CTTCTTTTGGGCGGAGGGAG 60.678 60.000 0.00 0.00 0.00 4.30
2066 2087 0.392595 CTTTTGGGCGGAGGGAGTAC 60.393 60.000 0.00 0.00 0.00 2.73
2074 2095 1.138266 GCGGAGGGAGTACATAGCAAA 59.862 52.381 0.00 0.00 0.00 3.68
2169 2190 0.541863 AGCAGGACCCCAAATACGAG 59.458 55.000 0.00 0.00 0.00 4.18
2174 2195 1.138464 GGACCCCAAATACGAGGAGTC 59.862 57.143 0.00 0.00 0.00 3.36
2235 2256 5.507985 GGGAGGCTATGATTGTAAATGCAAC 60.508 44.000 0.00 0.00 0.00 4.17
2370 2391 9.823098 CTTACAGATTCATATATTTCTGCTTGC 57.177 33.333 13.36 0.00 39.33 4.01
2393 2414 6.084925 GCTTTGATGAGTTGAAACATCTCAG 58.915 40.000 14.71 9.72 41.49 3.35
2399 2420 7.763071 TGATGAGTTGAAACATCTCAGTATCAG 59.237 37.037 14.71 0.00 41.49 2.90
2590 2646 4.454948 TCAAGGCAGGTTGACACG 57.545 55.556 0.00 0.00 31.31 4.49
2653 2709 4.227538 ACAACTACAACGAAGATCGAGTG 58.772 43.478 6.78 6.70 43.74 3.51
2989 3052 1.354040 CTCTTGCTTACCTGCACTCG 58.646 55.000 0.00 0.00 43.20 4.18
3220 3283 1.972978 CTTCGGGGTCGTTCTCCTT 59.027 57.895 0.00 0.00 33.68 3.36
3334 3400 2.211250 ACATGCACCTGAAGATGCTT 57.789 45.000 0.00 0.00 42.55 3.91
3478 3545 1.975407 GCAGGTGCTGTGCAGGATT 60.975 57.895 1.11 0.00 40.08 3.01
3479 3546 1.880894 CAGGTGCTGTGCAGGATTG 59.119 57.895 1.11 0.00 40.08 2.67
3521 3588 3.006859 TGGTGACAACGATGATGTCTTCT 59.993 43.478 0.00 0.00 45.81 2.85
3580 3704 6.841286 GCGTTTATCTTCATCTTGTATCGTTG 59.159 38.462 0.00 0.00 0.00 4.10
3587 3711 7.033791 TCTTCATCTTGTATCGTTGGTACTTC 58.966 38.462 0.00 0.00 0.00 3.01
3614 3738 4.533222 GAACAGTTCGTATGTTTTGTGGG 58.467 43.478 0.00 0.00 40.86 4.61
3615 3739 3.811083 ACAGTTCGTATGTTTTGTGGGA 58.189 40.909 0.00 0.00 0.00 4.37
3616 3740 4.394729 ACAGTTCGTATGTTTTGTGGGAT 58.605 39.130 0.00 0.00 0.00 3.85
3617 3741 4.825085 ACAGTTCGTATGTTTTGTGGGATT 59.175 37.500 0.00 0.00 0.00 3.01
3644 3768 6.895607 TGTATGGTGTGTTTATGTGATACG 57.104 37.500 0.00 0.00 0.00 3.06
3646 3770 7.545489 TGTATGGTGTGTTTATGTGATACGTA 58.455 34.615 0.00 0.00 0.00 3.57
3695 6862 4.663334 AGGGTCAGTTACTTGAAAATCCC 58.337 43.478 0.00 0.00 32.50 3.85
3720 6887 9.883142 CCATTCTAACTTATTAGATGGATCCTC 57.117 37.037 14.23 8.14 44.99 3.71
3881 7055 9.528018 CTTTAAAAAGTGTGCTTCAGGAATTAA 57.472 29.630 0.00 0.00 33.01 1.40
3894 7068 8.031277 GCTTCAGGAATTAAGTCAATCAACATT 58.969 33.333 5.15 0.00 0.00 2.71
3935 7136 2.483714 GGAGCGGCTTTGATCTGTGATA 60.484 50.000 2.97 0.00 0.00 2.15
3961 7313 0.178953 ATGGGCTGCTTTTGGAGTGT 60.179 50.000 0.00 0.00 40.26 3.55
3999 7352 1.407618 CGGATATGTGGAAGACGGTGA 59.592 52.381 0.00 0.00 0.00 4.02
4011 7364 3.781307 CGGTGAAGGATCCGGCCA 61.781 66.667 5.98 2.80 42.61 5.36
4012 7365 2.919043 GGTGAAGGATCCGGCCAT 59.081 61.111 5.98 0.00 0.00 4.40
4014 7367 1.700042 GGTGAAGGATCCGGCCATCT 61.700 60.000 5.98 0.00 0.00 2.90
4021 7374 1.681780 GGATCCGGCCATCTGTTGAAA 60.682 52.381 2.24 0.00 0.00 2.69
4022 7375 1.672881 GATCCGGCCATCTGTTGAAAG 59.327 52.381 2.24 0.00 0.00 2.62
4031 7384 0.821711 TCTGTTGAAAGGCGGGTTGG 60.822 55.000 0.00 0.00 0.00 3.77
4033 7386 1.362355 GTTGAAAGGCGGGTTGGTG 59.638 57.895 0.00 0.00 0.00 4.17
4041 7394 2.520741 CGGGTTGGTGTTGGCCTT 60.521 61.111 3.32 0.00 0.00 4.35
4047 7400 0.482446 TTGGTGTTGGCCTTGGATCT 59.518 50.000 3.32 0.00 0.00 2.75
4048 7401 0.251297 TGGTGTTGGCCTTGGATCTG 60.251 55.000 3.32 0.00 0.00 2.90
4059 7412 2.426024 CCTTGGATCTGGCATTGAACAG 59.574 50.000 0.00 3.25 36.07 3.16
4060 7413 2.133281 TGGATCTGGCATTGAACAGG 57.867 50.000 8.37 0.00 35.47 4.00
4061 7414 1.355381 TGGATCTGGCATTGAACAGGT 59.645 47.619 8.37 2.47 35.47 4.00
4062 7415 2.225091 TGGATCTGGCATTGAACAGGTT 60.225 45.455 8.37 0.00 35.47 3.50
4063 7416 2.424956 GGATCTGGCATTGAACAGGTTC 59.575 50.000 5.23 5.23 39.91 3.62
4069 7422 1.610624 GCATTGAACAGGTTCGGAGGA 60.611 52.381 7.58 0.00 42.28 3.71
4091 7444 1.682451 CCTCCGGCCGATGTTCCTTA 61.682 60.000 30.73 0.00 0.00 2.69
4101 7454 3.318017 CGATGTTCCTTATCGGGCTAAG 58.682 50.000 0.00 0.00 42.63 2.18
4104 7457 2.433239 TGTTCCTTATCGGGCTAAGTCC 59.567 50.000 0.00 0.00 0.00 3.85
4107 7460 2.040178 CCTTATCGGGCTAAGTCCAGT 58.960 52.381 0.00 0.00 0.00 4.00
4114 7467 1.549170 GGGCTAAGTCCAGTCTTTCGA 59.451 52.381 0.00 0.00 0.00 3.71
4142 7495 5.098218 GTGTTTATCACGGCTTGTTAACA 57.902 39.130 3.59 3.59 37.31 2.41
4143 7496 5.695818 GTGTTTATCACGGCTTGTTAACAT 58.304 37.500 9.56 0.00 37.31 2.71
4150 7503 2.009774 CGGCTTGTTAACATCTCCTGG 58.990 52.381 9.56 0.00 0.00 4.45
4151 7504 2.615493 CGGCTTGTTAACATCTCCTGGT 60.615 50.000 9.56 0.00 0.00 4.00
4164 7517 3.332968 TCTCCTGGTTAGGGGTTTCTTT 58.667 45.455 0.00 0.00 45.50 2.52
4169 7522 4.202535 CCTGGTTAGGGGTTTCTTTAGTGT 60.203 45.833 0.00 0.00 40.63 3.55
4170 7523 4.721132 TGGTTAGGGGTTTCTTTAGTGTG 58.279 43.478 0.00 0.00 0.00 3.82
4171 7524 4.166531 TGGTTAGGGGTTTCTTTAGTGTGT 59.833 41.667 0.00 0.00 0.00 3.72
4172 7525 4.517832 GGTTAGGGGTTTCTTTAGTGTGTG 59.482 45.833 0.00 0.00 0.00 3.82
4173 7526 2.583143 AGGGGTTTCTTTAGTGTGTGC 58.417 47.619 0.00 0.00 0.00 4.57
4174 7527 2.174854 AGGGGTTTCTTTAGTGTGTGCT 59.825 45.455 0.00 0.00 0.00 4.40
4175 7528 3.393278 AGGGGTTTCTTTAGTGTGTGCTA 59.607 43.478 0.00 0.00 0.00 3.49
4176 7529 4.139038 GGGGTTTCTTTAGTGTGTGCTAA 58.861 43.478 0.00 0.00 0.00 3.09
4177 7530 4.581409 GGGGTTTCTTTAGTGTGTGCTAAA 59.419 41.667 0.00 0.00 38.26 1.85
4178 7531 5.068067 GGGGTTTCTTTAGTGTGTGCTAAAA 59.932 40.000 0.00 0.00 39.53 1.52
4179 7532 6.239204 GGGGTTTCTTTAGTGTGTGCTAAAAT 60.239 38.462 0.00 0.00 39.53 1.82
4180 7533 6.640907 GGGTTTCTTTAGTGTGTGCTAAAATG 59.359 38.462 0.00 0.00 39.53 2.32
4181 7534 6.640907 GGTTTCTTTAGTGTGTGCTAAAATGG 59.359 38.462 0.00 0.00 39.53 3.16
4182 7535 5.371115 TCTTTAGTGTGTGCTAAAATGGC 57.629 39.130 0.00 0.00 39.53 4.40
4183 7536 4.217550 TCTTTAGTGTGTGCTAAAATGGCC 59.782 41.667 0.00 0.00 39.53 5.36
4184 7537 2.292828 AGTGTGTGCTAAAATGGCCT 57.707 45.000 3.32 0.00 0.00 5.19
4185 7538 1.888512 AGTGTGTGCTAAAATGGCCTG 59.111 47.619 3.32 0.00 0.00 4.85
4186 7539 0.602562 TGTGTGCTAAAATGGCCTGC 59.397 50.000 3.32 0.00 0.00 4.85
4187 7540 0.108662 GTGTGCTAAAATGGCCTGCC 60.109 55.000 3.32 0.00 0.00 4.85
4196 7549 2.934932 TGGCCTGCCAGGTCATGA 60.935 61.111 15.53 0.00 46.76 3.07
4197 7550 2.356278 GGCCTGCCAGGTCATGAA 59.644 61.111 11.31 0.00 40.51 2.57
4198 7551 1.751927 GGCCTGCCAGGTCATGAAG 60.752 63.158 11.31 0.00 40.51 3.02
4199 7552 1.751927 GCCTGCCAGGTCATGAAGG 60.752 63.158 13.35 0.00 37.80 3.46
4200 7553 1.077212 CCTGCCAGGTCATGAAGGG 60.077 63.158 1.39 0.02 31.94 3.95
4201 7554 1.751927 CTGCCAGGTCATGAAGGGC 60.752 63.158 20.84 20.84 44.82 5.19
4202 7555 2.440980 GCCAGGTCATGAAGGGCC 60.441 66.667 18.22 7.06 38.70 5.80
4203 7556 2.124570 CCAGGTCATGAAGGGCCG 60.125 66.667 0.00 0.00 0.00 6.13
4204 7557 2.124570 CAGGTCATGAAGGGCCGG 60.125 66.667 0.00 0.00 0.00 6.13
4205 7558 3.411517 AGGTCATGAAGGGCCGGG 61.412 66.667 2.18 0.00 0.00 5.73
4206 7559 4.506255 GGTCATGAAGGGCCGGGG 62.506 72.222 2.18 0.00 0.00 5.73
4207 7560 4.506255 GTCATGAAGGGCCGGGGG 62.506 72.222 2.18 0.00 0.00 5.40
4208 7561 4.750695 TCATGAAGGGCCGGGGGA 62.751 66.667 2.18 0.00 0.00 4.81
4209 7562 4.506255 CATGAAGGGCCGGGGGAC 62.506 72.222 2.18 0.00 0.00 4.46
4220 7573 4.029809 GGGGGACGAACCTGGGTG 62.030 72.222 0.00 0.00 38.98 4.61
4221 7574 4.717313 GGGGACGAACCTGGGTGC 62.717 72.222 0.00 0.00 38.98 5.01
4222 7575 3.637273 GGGACGAACCTGGGTGCT 61.637 66.667 0.00 0.00 38.98 4.40
4223 7576 2.358737 GGACGAACCTGGGTGCTG 60.359 66.667 0.00 0.00 35.41 4.41
4224 7577 2.741092 GACGAACCTGGGTGCTGA 59.259 61.111 0.00 0.00 0.00 4.26
4225 7578 1.296715 GACGAACCTGGGTGCTGAT 59.703 57.895 0.00 0.00 0.00 2.90
4226 7579 0.741221 GACGAACCTGGGTGCTGATC 60.741 60.000 0.00 0.00 0.00 2.92
4227 7580 1.194781 ACGAACCTGGGTGCTGATCT 61.195 55.000 0.00 0.00 0.00 2.75
4228 7581 0.036010 CGAACCTGGGTGCTGATCTT 60.036 55.000 0.00 0.00 0.00 2.40
4229 7582 1.743996 GAACCTGGGTGCTGATCTTC 58.256 55.000 0.00 0.00 0.00 2.87
4230 7583 0.036010 AACCTGGGTGCTGATCTTCG 60.036 55.000 0.00 0.00 0.00 3.79
4231 7584 1.153289 CCTGGGTGCTGATCTTCGG 60.153 63.158 0.00 0.00 0.00 4.30
4232 7585 1.153289 CTGGGTGCTGATCTTCGGG 60.153 63.158 0.00 0.00 0.00 5.14
4233 7586 2.514824 GGGTGCTGATCTTCGGGC 60.515 66.667 0.00 0.00 0.00 6.13
4234 7587 2.514824 GGTGCTGATCTTCGGGCC 60.515 66.667 0.00 0.00 0.00 5.80
4235 7588 2.514824 GTGCTGATCTTCGGGCCC 60.515 66.667 13.57 13.57 0.00 5.80
4236 7589 4.161295 TGCTGATCTTCGGGCCCG 62.161 66.667 39.13 39.13 41.35 6.13
4237 7590 4.162690 GCTGATCTTCGGGCCCGT 62.163 66.667 41.57 25.05 40.74 5.28
4238 7591 2.792947 GCTGATCTTCGGGCCCGTA 61.793 63.158 41.57 32.65 40.74 4.02
4239 7592 1.820581 CTGATCTTCGGGCCCGTAA 59.179 57.895 41.57 30.62 40.74 3.18
4240 7593 0.177141 CTGATCTTCGGGCCCGTAAA 59.823 55.000 41.57 28.76 40.74 2.01
4241 7594 0.177141 TGATCTTCGGGCCCGTAAAG 59.823 55.000 41.57 35.41 40.74 1.85
4242 7595 0.532196 GATCTTCGGGCCCGTAAAGG 60.532 60.000 41.57 24.45 40.74 3.11
4251 7604 3.728373 CCGTAAAGGGGCCCTGCT 61.728 66.667 29.60 19.40 32.13 4.24
4252 7605 2.438434 CGTAAAGGGGCCCTGCTG 60.438 66.667 29.60 13.08 32.13 4.41
4253 7606 2.043953 GTAAAGGGGCCCTGCTGG 60.044 66.667 29.60 1.89 32.13 4.85
4254 7607 2.204228 TAAAGGGGCCCTGCTGGA 60.204 61.111 29.60 6.97 35.39 3.86
4255 7608 1.622442 TAAAGGGGCCCTGCTGGAT 60.622 57.895 29.60 5.99 35.39 3.41
4256 7609 1.645402 TAAAGGGGCCCTGCTGGATC 61.645 60.000 29.60 1.15 35.39 3.36
4257 7610 4.765970 AGGGGCCCTGCTGGATCA 62.766 66.667 28.21 0.00 35.39 2.92
4258 7611 3.743017 GGGGCCCTGCTGGATCAA 61.743 66.667 24.38 0.00 35.39 2.57
4259 7612 2.360191 GGGCCCTGCTGGATCAAA 59.640 61.111 17.04 0.00 35.39 2.69
4260 7613 1.075748 GGGCCCTGCTGGATCAAAT 60.076 57.895 17.04 0.00 35.39 2.32
4261 7614 0.688749 GGGCCCTGCTGGATCAAATT 60.689 55.000 17.04 0.00 35.39 1.82
4262 7615 1.411501 GGGCCCTGCTGGATCAAATTA 60.412 52.381 17.04 0.00 35.39 1.40
4263 7616 1.959282 GGCCCTGCTGGATCAAATTAG 59.041 52.381 11.88 0.00 35.39 1.73
4264 7617 1.959282 GCCCTGCTGGATCAAATTAGG 59.041 52.381 11.88 0.00 35.39 2.69
4265 7618 2.590821 CCCTGCTGGATCAAATTAGGG 58.409 52.381 11.88 6.84 37.63 3.53
4266 7619 2.091665 CCCTGCTGGATCAAATTAGGGT 60.092 50.000 11.88 0.00 38.81 4.34
4267 7620 2.954318 CCTGCTGGATCAAATTAGGGTG 59.046 50.000 2.92 0.00 34.57 4.61
4268 7621 2.360165 CTGCTGGATCAAATTAGGGTGC 59.640 50.000 0.00 0.00 0.00 5.01
4269 7622 2.025037 TGCTGGATCAAATTAGGGTGCT 60.025 45.455 0.00 0.00 0.00 4.40
4270 7623 3.201930 TGCTGGATCAAATTAGGGTGCTA 59.798 43.478 0.00 0.00 0.00 3.49
4271 7624 4.207165 GCTGGATCAAATTAGGGTGCTAA 58.793 43.478 0.00 0.00 0.00 3.09
4272 7625 4.644685 GCTGGATCAAATTAGGGTGCTAAA 59.355 41.667 0.00 0.00 0.00 1.85
4273 7626 5.302823 GCTGGATCAAATTAGGGTGCTAAAT 59.697 40.000 0.00 0.00 0.00 1.40
4274 7627 6.713762 TGGATCAAATTAGGGTGCTAAATG 57.286 37.500 0.00 0.00 0.00 2.32
4275 7628 5.598005 TGGATCAAATTAGGGTGCTAAATGG 59.402 40.000 0.00 0.00 0.00 3.16
4276 7629 5.509670 GGATCAAATTAGGGTGCTAAATGGC 60.510 44.000 0.00 0.00 0.00 4.40
4277 7630 3.704061 TCAAATTAGGGTGCTAAATGGCC 59.296 43.478 0.00 0.00 0.00 5.36
4278 7631 3.688049 AATTAGGGTGCTAAATGGCCT 57.312 42.857 3.32 0.00 0.00 5.19
4279 7632 4.806952 AATTAGGGTGCTAAATGGCCTA 57.193 40.909 3.32 0.00 0.00 3.93
4280 7633 3.857157 TTAGGGTGCTAAATGGCCTAG 57.143 47.619 3.32 0.00 0.00 3.02
4281 7634 0.183731 AGGGTGCTAAATGGCCTAGC 59.816 55.000 14.13 14.13 41.83 3.42
4282 7635 0.183731 GGGTGCTAAATGGCCTAGCT 59.816 55.000 19.86 0.00 41.96 3.32
4283 7636 1.312815 GGTGCTAAATGGCCTAGCTG 58.687 55.000 19.86 3.20 41.96 4.24
4284 7637 1.134098 GGTGCTAAATGGCCTAGCTGA 60.134 52.381 19.86 2.05 41.96 4.26
4285 7638 2.487986 GGTGCTAAATGGCCTAGCTGAT 60.488 50.000 19.86 0.00 41.96 2.90
4286 7639 2.551459 GTGCTAAATGGCCTAGCTGATG 59.449 50.000 19.86 0.00 41.96 3.07
4287 7640 2.157738 GCTAAATGGCCTAGCTGATGG 58.842 52.381 13.81 0.00 38.99 3.51
4288 7641 2.787994 CTAAATGGCCTAGCTGATGGG 58.212 52.381 3.32 0.00 0.00 4.00
4293 7646 3.976593 CCTAGCTGATGGGCCTGA 58.023 61.111 4.53 0.00 0.00 3.86
4294 7647 1.449353 CCTAGCTGATGGGCCTGAC 59.551 63.158 4.53 0.00 0.00 3.51
4295 7648 1.449353 CTAGCTGATGGGCCTGACC 59.551 63.158 4.53 0.00 37.93 4.02
4296 7649 1.003442 TAGCTGATGGGCCTGACCT 59.997 57.895 4.53 0.00 39.10 3.85
4297 7650 1.340399 TAGCTGATGGGCCTGACCTG 61.340 60.000 4.53 0.00 39.10 4.00
4298 7651 2.976490 GCTGATGGGCCTGACCTGT 61.976 63.158 4.53 0.00 39.10 4.00
4299 7652 1.222936 CTGATGGGCCTGACCTGTC 59.777 63.158 4.53 0.00 39.10 3.51
4300 7653 1.229625 TGATGGGCCTGACCTGTCT 60.230 57.895 4.53 0.00 39.10 3.41
4301 7654 1.267574 TGATGGGCCTGACCTGTCTC 61.268 60.000 4.53 0.00 39.10 3.36
4302 7655 1.977293 GATGGGCCTGACCTGTCTCC 61.977 65.000 4.53 0.00 39.10 3.71
4303 7656 2.284995 GGGCCTGACCTGTCTCCT 60.285 66.667 0.84 0.00 39.10 3.69
4304 7657 2.664081 GGGCCTGACCTGTCTCCTG 61.664 68.421 0.84 0.00 39.10 3.86
4305 7658 1.610673 GGCCTGACCTGTCTCCTGA 60.611 63.158 0.00 0.00 34.51 3.86
4306 7659 1.594310 GCCTGACCTGTCTCCTGAC 59.406 63.158 0.00 0.00 43.20 3.51
4307 7660 1.886585 CCTGACCTGTCTCCTGACG 59.113 63.158 0.00 0.00 45.70 4.35
4308 7661 0.609406 CCTGACCTGTCTCCTGACGA 60.609 60.000 0.00 0.00 45.70 4.20
4309 7662 0.523966 CTGACCTGTCTCCTGACGAC 59.476 60.000 0.00 0.00 45.70 4.34
4310 7663 0.110678 TGACCTGTCTCCTGACGACT 59.889 55.000 0.00 0.00 45.70 4.18
4311 7664 0.523966 GACCTGTCTCCTGACGACTG 59.476 60.000 0.00 0.00 45.70 3.51
4312 7665 1.886585 CCTGTCTCCTGACGACTGG 59.113 63.158 4.49 4.49 45.70 4.00
4313 7666 1.214062 CTGTCTCCTGACGACTGGC 59.786 63.158 5.95 0.00 45.70 4.85
4314 7667 1.228583 TGTCTCCTGACGACTGGCT 60.229 57.895 5.95 0.00 45.70 4.75
4315 7668 0.827925 TGTCTCCTGACGACTGGCTT 60.828 55.000 5.95 0.00 45.70 4.35
4316 7669 1.174783 GTCTCCTGACGACTGGCTTA 58.825 55.000 5.95 0.00 35.51 3.09
4317 7670 1.133407 GTCTCCTGACGACTGGCTTAG 59.867 57.143 5.95 0.00 35.51 2.18
4318 7671 0.457851 CTCCTGACGACTGGCTTAGG 59.542 60.000 5.95 0.00 35.51 2.69
4319 7672 0.039180 TCCTGACGACTGGCTTAGGA 59.961 55.000 5.95 0.00 35.51 2.94
4320 7673 0.457851 CCTGACGACTGGCTTAGGAG 59.542 60.000 0.00 0.00 0.00 3.69
4321 7674 1.464734 CTGACGACTGGCTTAGGAGA 58.535 55.000 0.00 0.00 0.00 3.71
4322 7675 2.028130 CTGACGACTGGCTTAGGAGAT 58.972 52.381 0.00 0.00 0.00 2.75
4323 7676 3.215151 CTGACGACTGGCTTAGGAGATA 58.785 50.000 0.00 0.00 0.00 1.98
4324 7677 2.950309 TGACGACTGGCTTAGGAGATAC 59.050 50.000 0.00 0.00 0.00 2.24
4325 7678 3.215975 GACGACTGGCTTAGGAGATACT 58.784 50.000 0.00 0.00 0.00 2.12
4326 7679 3.215975 ACGACTGGCTTAGGAGATACTC 58.784 50.000 0.00 0.00 0.00 2.59
4335 7688 2.648593 GGAGATACTCCTCGGAGGC 58.351 63.158 19.48 4.85 46.41 4.70
4336 7689 0.111639 GGAGATACTCCTCGGAGGCT 59.888 60.000 19.48 9.88 46.41 4.58
4337 7690 1.479757 GGAGATACTCCTCGGAGGCTT 60.480 57.143 19.48 10.47 46.41 4.35
4338 7691 1.883926 GAGATACTCCTCGGAGGCTTC 59.116 57.143 19.48 12.05 45.88 3.86
4339 7692 0.594110 GATACTCCTCGGAGGCTTCG 59.406 60.000 19.48 9.46 45.88 3.79
4340 7693 1.457009 ATACTCCTCGGAGGCTTCGC 61.457 60.000 19.48 0.00 45.88 4.70
4341 7694 2.831894 TACTCCTCGGAGGCTTCGCA 62.832 60.000 19.48 0.00 45.88 5.10
4342 7695 3.708220 CTCCTCGGAGGCTTCGCAC 62.708 68.421 19.48 0.00 38.51 5.34
4343 7696 4.069232 CCTCGGAGGCTTCGCACA 62.069 66.667 11.19 0.00 0.00 4.57
4344 7697 2.185350 CTCGGAGGCTTCGCACAT 59.815 61.111 11.19 0.00 0.00 3.21
4345 7698 2.125552 TCGGAGGCTTCGCACATG 60.126 61.111 11.19 0.00 0.00 3.21
4348 7701 2.109126 GGAGGCTTCGCACATGGAC 61.109 63.158 0.00 0.00 0.00 4.02
4351 7704 0.322816 AGGCTTCGCACATGGACATT 60.323 50.000 0.00 0.00 0.00 2.71
4352 7705 0.527565 GGCTTCGCACATGGACATTT 59.472 50.000 0.00 0.00 0.00 2.32
4355 7708 2.161410 GCTTCGCACATGGACATTTACA 59.839 45.455 0.00 0.00 0.00 2.41
4365 7718 4.365514 TGGACATTTACAAGAGCAAGGA 57.634 40.909 0.00 0.00 0.00 3.36
4366 7719 4.326826 TGGACATTTACAAGAGCAAGGAG 58.673 43.478 0.00 0.00 0.00 3.69
4367 7720 3.127721 GGACATTTACAAGAGCAAGGAGC 59.872 47.826 0.00 0.00 46.19 4.70
4376 7729 3.272031 GCAAGGAGCTGTTCTGGC 58.728 61.111 0.00 0.00 41.15 4.85
4378 7731 1.584380 GCAAGGAGCTGTTCTGGCAG 61.584 60.000 8.58 8.58 41.15 4.85
4384 7737 2.049156 CTGTTCTGGCAGCGTCGA 60.049 61.111 10.34 0.00 0.00 4.20
4385 7738 2.049156 TGTTCTGGCAGCGTCGAG 60.049 61.111 10.34 0.00 0.00 4.04
4386 7739 2.811317 GTTCTGGCAGCGTCGAGG 60.811 66.667 10.34 0.00 0.00 4.63
4387 7740 4.069232 TTCTGGCAGCGTCGAGGG 62.069 66.667 10.34 0.00 0.00 4.30
4391 7744 4.593864 GGCAGCGTCGAGGGGATC 62.594 72.222 7.31 0.00 0.00 3.36
4392 7745 3.838271 GCAGCGTCGAGGGGATCA 61.838 66.667 7.31 0.00 0.00 2.92
4393 7746 2.415010 CAGCGTCGAGGGGATCAG 59.585 66.667 7.31 0.00 0.00 2.90
4395 7748 1.379977 AGCGTCGAGGGGATCAGAA 60.380 57.895 7.31 0.00 0.00 3.02
4396 7749 1.227002 GCGTCGAGGGGATCAGAAC 60.227 63.158 7.31 0.00 0.00 3.01
4397 7750 1.668101 GCGTCGAGGGGATCAGAACT 61.668 60.000 7.31 0.00 0.00 3.01
4398 7751 1.676746 CGTCGAGGGGATCAGAACTA 58.323 55.000 0.00 0.00 0.00 2.24
4400 7753 1.338655 GTCGAGGGGATCAGAACTAGC 59.661 57.143 0.00 0.00 0.00 3.42
4401 7754 1.215673 TCGAGGGGATCAGAACTAGCT 59.784 52.381 0.00 0.00 0.00 3.32
4403 7756 1.967779 GAGGGGATCAGAACTAGCTCC 59.032 57.143 0.00 0.00 0.00 4.70
4404 7757 1.578215 AGGGGATCAGAACTAGCTCCT 59.422 52.381 0.00 0.00 0.00 3.69
4405 7758 2.022527 AGGGGATCAGAACTAGCTCCTT 60.023 50.000 0.00 0.00 0.00 3.36
4406 7759 3.207777 AGGGGATCAGAACTAGCTCCTTA 59.792 47.826 0.00 0.00 0.00 2.69
4407 7760 3.967987 GGGGATCAGAACTAGCTCCTTAA 59.032 47.826 0.00 0.00 0.00 1.85
4408 7761 4.409247 GGGGATCAGAACTAGCTCCTTAAA 59.591 45.833 0.00 0.00 0.00 1.52
4411 7764 5.454045 GGATCAGAACTAGCTCCTTAAAGGG 60.454 48.000 0.00 0.00 35.59 3.95
4412 7765 3.775316 TCAGAACTAGCTCCTTAAAGGGG 59.225 47.826 0.00 0.00 39.50 4.79
4413 7766 3.775316 CAGAACTAGCTCCTTAAAGGGGA 59.225 47.826 0.00 0.00 38.47 4.81
4414 7767 4.410555 CAGAACTAGCTCCTTAAAGGGGAT 59.589 45.833 0.00 0.00 38.47 3.85
4415 7768 4.410555 AGAACTAGCTCCTTAAAGGGGATG 59.589 45.833 0.00 0.00 38.47 3.51
4416 7769 2.439880 ACTAGCTCCTTAAAGGGGATGC 59.560 50.000 0.00 0.00 38.47 3.91
4417 7770 0.181350 AGCTCCTTAAAGGGGATGCG 59.819 55.000 0.00 0.00 38.47 4.73
4420 7773 2.289565 CTCCTTAAAGGGGATGCGAAC 58.710 52.381 0.00 0.00 38.47 3.95
4421 7774 1.631388 TCCTTAAAGGGGATGCGAACA 59.369 47.619 0.00 0.00 35.59 3.18
4422 7775 1.743394 CCTTAAAGGGGATGCGAACAC 59.257 52.381 0.00 0.00 0.00 3.32
4423 7776 2.618045 CCTTAAAGGGGATGCGAACACT 60.618 50.000 0.00 0.00 0.00 3.55
4424 7777 2.107950 TAAAGGGGATGCGAACACTG 57.892 50.000 0.00 0.00 0.00 3.66
4425 7778 1.244019 AAAGGGGATGCGAACACTGC 61.244 55.000 0.00 0.00 0.00 4.40
4426 7779 2.045926 GGGGATGCGAACACTGCT 60.046 61.111 0.00 0.00 0.00 4.24
4427 7780 1.675641 GGGGATGCGAACACTGCTT 60.676 57.895 0.00 0.00 0.00 3.91
4429 7782 1.668419 GGGATGCGAACACTGCTTAT 58.332 50.000 0.00 0.00 0.00 1.73
4430 7783 2.017049 GGGATGCGAACACTGCTTATT 58.983 47.619 0.00 0.00 0.00 1.40
4431 7784 2.423538 GGGATGCGAACACTGCTTATTT 59.576 45.455 0.00 0.00 0.00 1.40
4432 7785 3.487544 GGGATGCGAACACTGCTTATTTC 60.488 47.826 0.00 0.00 0.00 2.17
4433 7786 3.487544 GGATGCGAACACTGCTTATTTCC 60.488 47.826 0.00 0.00 0.00 3.13
4435 7788 2.483877 TGCGAACACTGCTTATTTCCAG 59.516 45.455 0.00 0.00 35.26 3.86
4436 7789 2.159517 GCGAACACTGCTTATTTCCAGG 60.160 50.000 0.00 0.00 33.43 4.45
4437 7790 2.159517 CGAACACTGCTTATTTCCAGGC 60.160 50.000 0.00 0.00 33.43 4.85
4438 7791 1.453155 ACACTGCTTATTTCCAGGCG 58.547 50.000 0.00 0.00 33.43 5.52
4439 7792 0.734889 CACTGCTTATTTCCAGGCGG 59.265 55.000 0.00 0.00 37.14 6.13
4440 7793 0.328258 ACTGCTTATTTCCAGGCGGT 59.672 50.000 0.00 0.00 39.15 5.68
4443 7796 0.743345 GCTTATTTCCAGGCGGTCGT 60.743 55.000 0.00 0.00 0.00 4.34
4446 7799 0.609151 TATTTCCAGGCGGTCGTCAA 59.391 50.000 0.00 0.00 0.00 3.18
4447 7800 0.035439 ATTTCCAGGCGGTCGTCAAT 60.035 50.000 0.00 0.00 0.00 2.57
4448 7801 0.953471 TTTCCAGGCGGTCGTCAATG 60.953 55.000 0.00 0.00 0.00 2.82
4449 7802 2.796483 TTCCAGGCGGTCGTCAATGG 62.796 60.000 0.00 0.00 0.00 3.16
4450 7803 3.499737 CAGGCGGTCGTCAATGGC 61.500 66.667 0.00 0.00 0.00 4.40
4451 7804 4.778143 AGGCGGTCGTCAATGGCC 62.778 66.667 0.00 0.00 44.07 5.36
4455 7808 3.499737 GGTCGTCAATGGCCGCAG 61.500 66.667 0.00 0.00 0.00 5.18
4473 7826 2.807622 GCGGAAATGTGCCATCCC 59.192 61.111 0.00 0.00 0.00 3.85
4474 7827 1.754234 GCGGAAATGTGCCATCCCT 60.754 57.895 0.00 0.00 0.00 4.20
4475 7828 1.322538 GCGGAAATGTGCCATCCCTT 61.323 55.000 0.00 0.00 0.00 3.95
4476 7829 1.185315 CGGAAATGTGCCATCCCTTT 58.815 50.000 0.00 0.00 0.00 3.11
4477 7830 1.134946 CGGAAATGTGCCATCCCTTTC 59.865 52.381 0.00 0.00 0.00 2.62
4478 7831 1.482182 GGAAATGTGCCATCCCTTTCC 59.518 52.381 0.00 0.00 38.42 3.13
4479 7832 2.460669 GAAATGTGCCATCCCTTTCCT 58.539 47.619 0.00 0.00 0.00 3.36
4480 7833 2.149973 AATGTGCCATCCCTTTCCTC 57.850 50.000 0.00 0.00 0.00 3.71
4481 7834 1.302907 ATGTGCCATCCCTTTCCTCT 58.697 50.000 0.00 0.00 0.00 3.69
4482 7835 0.329261 TGTGCCATCCCTTTCCTCTG 59.671 55.000 0.00 0.00 0.00 3.35
4483 7836 0.394899 GTGCCATCCCTTTCCTCTGG 60.395 60.000 0.00 0.00 0.00 3.86
4484 7837 1.228510 GCCATCCCTTTCCTCTGGG 59.771 63.158 0.00 0.00 44.66 4.45
4489 7842 1.885049 TCCCTTTCCTCTGGGATGAG 58.115 55.000 0.00 0.00 46.69 2.90
4497 7850 1.719529 CTCTGGGATGAGGATGCTCT 58.280 55.000 15.82 0.84 0.00 4.09
4498 7851 2.048601 CTCTGGGATGAGGATGCTCTT 58.951 52.381 15.82 9.14 0.00 2.85
4499 7852 2.037511 CTCTGGGATGAGGATGCTCTTC 59.962 54.545 18.39 18.39 0.00 2.87
4500 7853 2.048601 CTGGGATGAGGATGCTCTTCT 58.951 52.381 23.41 7.06 0.00 2.85
4503 7856 2.045524 GGATGAGGATGCTCTTCTGGA 58.954 52.381 23.41 1.61 0.00 3.86
4504 7857 2.437281 GGATGAGGATGCTCTTCTGGAA 59.563 50.000 23.41 0.93 0.00 3.53
4506 7859 3.623906 TGAGGATGCTCTTCTGGAAAG 57.376 47.619 15.82 0.00 0.00 2.62
4507 7860 2.287769 GAGGATGCTCTTCTGGAAAGC 58.712 52.381 7.03 9.09 36.56 3.51
4508 7861 1.064832 AGGATGCTCTTCTGGAAAGCC 60.065 52.381 11.71 0.00 35.12 4.35
4509 7862 1.387539 GATGCTCTTCTGGAAAGCCC 58.612 55.000 11.71 0.00 35.12 5.19
4510 7863 0.700564 ATGCTCTTCTGGAAAGCCCA 59.299 50.000 11.71 0.00 44.25 5.36
4517 7870 4.330056 TGGAAAGCCCAGAGGACA 57.670 55.556 0.00 0.00 40.82 4.02
4518 7871 2.791253 TGGAAAGCCCAGAGGACAT 58.209 52.632 0.00 0.00 40.82 3.06
4519 7872 0.620556 TGGAAAGCCCAGAGGACATC 59.379 55.000 0.00 0.00 40.82 3.06
4521 7874 1.283321 GGAAAGCCCAGAGGACATCTT 59.717 52.381 0.00 0.00 35.47 2.40
4523 7876 0.539051 AAGCCCAGAGGACATCTTCG 59.461 55.000 0.00 0.00 35.47 3.79
4524 7877 1.522580 GCCCAGAGGACATCTTCGC 60.523 63.158 0.00 0.00 35.47 4.70
4525 7878 1.144936 CCCAGAGGACATCTTCGCC 59.855 63.158 0.00 0.00 35.47 5.54
4526 7879 1.144936 CCAGAGGACATCTTCGCCC 59.855 63.158 0.00 0.00 35.47 6.13
4528 7881 0.467384 CAGAGGACATCTTCGCCCAT 59.533 55.000 0.00 0.00 35.47 4.00
4529 7882 1.688735 CAGAGGACATCTTCGCCCATA 59.311 52.381 0.00 0.00 35.47 2.74
4530 7883 2.301296 CAGAGGACATCTTCGCCCATAT 59.699 50.000 0.00 0.00 35.47 1.78
4531 7884 2.975489 AGAGGACATCTTCGCCCATATT 59.025 45.455 0.00 0.00 32.99 1.28
4532 7885 3.392616 AGAGGACATCTTCGCCCATATTT 59.607 43.478 0.00 0.00 32.99 1.40
4533 7886 4.593206 AGAGGACATCTTCGCCCATATTTA 59.407 41.667 0.00 0.00 32.99 1.40
4534 7887 4.642429 AGGACATCTTCGCCCATATTTAC 58.358 43.478 0.00 0.00 0.00 2.01
4535 7888 4.348168 AGGACATCTTCGCCCATATTTACT 59.652 41.667 0.00 0.00 0.00 2.24
4536 7889 4.691216 GGACATCTTCGCCCATATTTACTC 59.309 45.833 0.00 0.00 0.00 2.59
4537 7890 5.511545 GGACATCTTCGCCCATATTTACTCT 60.512 44.000 0.00 0.00 0.00 3.24
4538 7891 5.930135 ACATCTTCGCCCATATTTACTCTT 58.070 37.500 0.00 0.00 0.00 2.85
4539 7892 6.357367 ACATCTTCGCCCATATTTACTCTTT 58.643 36.000 0.00 0.00 0.00 2.52
4540 7893 6.483640 ACATCTTCGCCCATATTTACTCTTTC 59.516 38.462 0.00 0.00 0.00 2.62
4541 7894 6.235231 TCTTCGCCCATATTTACTCTTTCT 57.765 37.500 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.679139 TGCATATTCGGCTTCCAAGG 58.321 50.000 0.00 0.00 0.00 3.61
236 237 3.142951 AGCTCTACACGGTATAGCTCTG 58.857 50.000 14.12 0.00 39.23 3.35
275 276 8.735315 TGTGTGTTTTCAGAAAATCAGAAGTAA 58.265 29.630 11.54 0.00 32.22 2.24
279 280 6.918626 TGTGTGTGTTTTCAGAAAATCAGAA 58.081 32.000 11.54 4.13 32.22 3.02
280 281 6.507958 TGTGTGTGTTTTCAGAAAATCAGA 57.492 33.333 11.54 9.70 32.22 3.27
411 422 6.744112 TGTGCCATAAAAAGTCTAGTTTTGG 58.256 36.000 0.00 0.00 29.93 3.28
513 527 5.246429 ACAGGAGGTAGAACTTTGTCTTAGG 59.754 44.000 0.00 0.00 0.00 2.69
556 570 4.437239 ACTACTTAGATGCATGCAGTGAC 58.563 43.478 26.69 16.12 0.00 3.67
609 623 3.604582 AGTCAAAGCCTCAGTCTAATGC 58.395 45.455 0.00 0.00 0.00 3.56
616 630 4.899352 AATAGTGAGTCAAAGCCTCAGT 57.101 40.909 0.00 0.00 43.32 3.41
737 751 7.372451 TGAGCTGGTGTATGTATGTTAAAAC 57.628 36.000 0.00 0.00 0.00 2.43
968 989 3.552604 TCACTTGCTTAATTTGGCGAC 57.447 42.857 0.00 0.00 0.00 5.19
1058 1079 2.972625 TCGCCAGGAAGACTACAATTG 58.027 47.619 3.24 3.24 0.00 2.32
1125 1146 3.957586 CACCTGTCAGGGCAGCCA 61.958 66.667 23.06 0.00 40.58 4.75
1286 1307 1.933181 CCAGCGAAATATCAGCAACGA 59.067 47.619 0.00 0.00 0.00 3.85
1368 1389 1.065851 TCGTTATTGCTCGCCGATACA 59.934 47.619 0.00 0.00 0.00 2.29
1557 1578 2.509336 CATGGTGCTCCGTCGTCC 60.509 66.667 0.00 0.00 36.30 4.79
1638 1659 2.930040 CACACTGCTACTGTTAATCGGG 59.070 50.000 0.00 0.00 0.00 5.14
1826 1847 2.418692 CACTGGTACATGCGTGGTTTA 58.581 47.619 11.36 0.00 38.20 2.01
1840 1861 1.676006 GCAGTAACTGTTTGCACTGGT 59.324 47.619 18.51 0.00 39.02 4.00
1872 1893 1.619827 CACAAGTACCCAGGTCCGTTA 59.380 52.381 0.00 0.00 0.00 3.18
1875 1896 1.375523 GCACAAGTACCCAGGTCCG 60.376 63.158 0.00 0.00 0.00 4.79
1971 1992 2.291605 ACTTATTTTGGGACAGAGGGGC 60.292 50.000 0.00 0.00 42.39 5.80
1972 1993 3.245264 ACACTTATTTTGGGACAGAGGGG 60.245 47.826 0.00 0.00 42.39 4.79
1973 1994 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
1974 1995 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
1975 1996 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
1976 1997 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
1977 1998 5.765182 ACTTGAGACACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
1978 1999 5.690865 ACTTGAGACACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
1979 2000 7.923414 ATACTTGAGACACTTATTTTGGGAC 57.077 36.000 0.00 0.00 0.00 4.46
1980 2001 8.822805 ACTATACTTGAGACACTTATTTTGGGA 58.177 33.333 0.00 0.00 0.00 4.37
2014 2035 9.944663 CTCAACTTTGTACAAACTTTAGCATAA 57.055 29.630 17.01 0.00 0.00 1.90
2015 2036 9.332502 TCTCAACTTTGTACAAACTTTAGCATA 57.667 29.630 17.01 0.00 0.00 3.14
2016 2037 8.129211 GTCTCAACTTTGTACAAACTTTAGCAT 58.871 33.333 17.01 0.00 0.00 3.79
2017 2038 7.119992 TGTCTCAACTTTGTACAAACTTTAGCA 59.880 33.333 17.01 12.92 0.00 3.49
2018 2039 7.428472 GTGTCTCAACTTTGTACAAACTTTAGC 59.572 37.037 17.01 11.08 30.99 3.09
2019 2040 8.665685 AGTGTCTCAACTTTGTACAAACTTTAG 58.334 33.333 17.01 14.07 30.99 1.85
2020 2041 8.556213 AGTGTCTCAACTTTGTACAAACTTTA 57.444 30.769 17.01 5.82 30.99 1.85
2021 2042 7.448748 AGTGTCTCAACTTTGTACAAACTTT 57.551 32.000 17.01 10.24 30.99 2.66
2022 2043 7.390718 AGAAGTGTCTCAACTTTGTACAAACTT 59.609 33.333 17.01 15.00 40.48 2.66
2023 2044 6.879458 AGAAGTGTCTCAACTTTGTACAAACT 59.121 34.615 17.01 7.39 40.48 2.66
2024 2045 7.073342 AGAAGTGTCTCAACTTTGTACAAAC 57.927 36.000 17.01 7.12 40.48 2.93
2025 2046 7.681939 AAGAAGTGTCTCAACTTTGTACAAA 57.318 32.000 19.53 19.53 40.48 2.83
2026 2047 7.681939 AAAGAAGTGTCTCAACTTTGTACAA 57.318 32.000 3.59 3.59 40.48 2.41
2027 2048 7.361713 CCAAAAGAAGTGTCTCAACTTTGTACA 60.362 37.037 0.00 0.00 40.48 2.90
2028 2049 6.967199 CCAAAAGAAGTGTCTCAACTTTGTAC 59.033 38.462 0.00 0.00 40.48 2.90
2029 2050 6.094881 CCCAAAAGAAGTGTCTCAACTTTGTA 59.905 38.462 0.00 0.00 40.48 2.41
2030 2051 5.105756 CCCAAAAGAAGTGTCTCAACTTTGT 60.106 40.000 0.00 0.00 40.48 2.83
2031 2052 5.343249 CCCAAAAGAAGTGTCTCAACTTTG 58.657 41.667 0.00 0.00 40.48 2.77
2032 2053 4.142160 GCCCAAAAGAAGTGTCTCAACTTT 60.142 41.667 0.00 0.00 40.48 2.66
2033 2054 3.381590 GCCCAAAAGAAGTGTCTCAACTT 59.618 43.478 0.00 0.00 43.08 2.66
2034 2055 2.952310 GCCCAAAAGAAGTGTCTCAACT 59.048 45.455 0.00 0.00 30.70 3.16
2035 2056 2.287009 CGCCCAAAAGAAGTGTCTCAAC 60.287 50.000 0.00 0.00 30.70 3.18
2036 2057 1.946768 CGCCCAAAAGAAGTGTCTCAA 59.053 47.619 0.00 0.00 30.70 3.02
2037 2058 1.593196 CGCCCAAAAGAAGTGTCTCA 58.407 50.000 0.00 0.00 30.70 3.27
2038 2059 0.875059 CCGCCCAAAAGAAGTGTCTC 59.125 55.000 0.00 0.00 30.70 3.36
2039 2060 0.472471 TCCGCCCAAAAGAAGTGTCT 59.528 50.000 0.00 0.00 34.72 3.41
2040 2061 0.875059 CTCCGCCCAAAAGAAGTGTC 59.125 55.000 0.00 0.00 0.00 3.67
2041 2062 0.537371 CCTCCGCCCAAAAGAAGTGT 60.537 55.000 0.00 0.00 0.00 3.55
2042 2063 1.244019 CCCTCCGCCCAAAAGAAGTG 61.244 60.000 0.00 0.00 0.00 3.16
2043 2064 1.074951 CCCTCCGCCCAAAAGAAGT 59.925 57.895 0.00 0.00 0.00 3.01
2044 2065 0.678048 CTCCCTCCGCCCAAAAGAAG 60.678 60.000 0.00 0.00 0.00 2.85
2045 2066 1.378762 CTCCCTCCGCCCAAAAGAA 59.621 57.895 0.00 0.00 0.00 2.52
2046 2067 0.545787 TACTCCCTCCGCCCAAAAGA 60.546 55.000 0.00 0.00 0.00 2.52
2047 2068 0.392595 GTACTCCCTCCGCCCAAAAG 60.393 60.000 0.00 0.00 0.00 2.27
2048 2069 1.128809 TGTACTCCCTCCGCCCAAAA 61.129 55.000 0.00 0.00 0.00 2.44
2049 2070 0.912487 ATGTACTCCCTCCGCCCAAA 60.912 55.000 0.00 0.00 0.00 3.28
2050 2071 0.031917 TATGTACTCCCTCCGCCCAA 60.032 55.000 0.00 0.00 0.00 4.12
2051 2072 0.469331 CTATGTACTCCCTCCGCCCA 60.469 60.000 0.00 0.00 0.00 5.36
2052 2073 1.817911 GCTATGTACTCCCTCCGCCC 61.818 65.000 0.00 0.00 0.00 6.13
2053 2074 1.113517 TGCTATGTACTCCCTCCGCC 61.114 60.000 0.00 0.00 0.00 6.13
2054 2075 0.750850 TTGCTATGTACTCCCTCCGC 59.249 55.000 0.00 0.00 0.00 5.54
2055 2076 2.167693 TGTTTGCTATGTACTCCCTCCG 59.832 50.000 0.00 0.00 0.00 4.63
2056 2077 3.197983 ACTGTTTGCTATGTACTCCCTCC 59.802 47.826 0.00 0.00 0.00 4.30
2057 2078 4.473477 ACTGTTTGCTATGTACTCCCTC 57.527 45.455 0.00 0.00 0.00 4.30
2058 2079 4.910458 AACTGTTTGCTATGTACTCCCT 57.090 40.909 0.00 0.00 0.00 4.20
2059 2080 5.001232 TCAAACTGTTTGCTATGTACTCCC 58.999 41.667 24.62 0.00 40.43 4.30
2060 2081 5.701290 AGTCAAACTGTTTGCTATGTACTCC 59.299 40.000 24.62 5.67 40.43 3.85
2061 2082 6.787085 AGTCAAACTGTTTGCTATGTACTC 57.213 37.500 24.62 8.79 40.43 2.59
2062 2083 8.848474 ATAAGTCAAACTGTTTGCTATGTACT 57.152 30.769 24.62 18.75 40.43 2.73
2063 2084 8.936864 AGATAAGTCAAACTGTTTGCTATGTAC 58.063 33.333 24.62 17.11 40.43 2.90
2066 2087 8.032952 TCAGATAAGTCAAACTGTTTGCTATG 57.967 34.615 24.62 18.87 40.43 2.23
2074 2095 4.997395 ACGCAATCAGATAAGTCAAACTGT 59.003 37.500 0.00 0.00 0.00 3.55
2235 2256 3.318839 TGCCATCAGACTTGGTTCTTTTG 59.681 43.478 0.00 0.00 36.57 2.44
2268 2289 2.676839 TCGAGAATACAGAGGTCGACAC 59.323 50.000 18.91 10.76 34.86 3.67
2370 2391 7.199541 ACTGAGATGTTTCAACTCATCAAAG 57.800 36.000 9.43 6.70 41.19 2.77
2590 2646 2.380084 TTTCTGTGAGTATGCGGACC 57.620 50.000 0.00 0.00 0.00 4.46
2887 2946 0.877071 CAGCACTGCCGTGAAGAAAT 59.123 50.000 12.93 0.00 43.97 2.17
2989 3052 0.802494 AAATTGTGCGGGATGTCGAC 59.198 50.000 9.11 9.11 0.00 4.20
3220 3283 2.690497 CCTCTTCCTCGTTATCAGCTCA 59.310 50.000 0.00 0.00 0.00 4.26
3472 3539 1.520494 CCGGATGCATCTCAATCCTG 58.480 55.000 25.28 2.73 0.00 3.86
3478 3545 4.240103 CCGGCCGGATGCATCTCA 62.240 66.667 41.82 0.00 43.89 3.27
3516 3583 0.979665 CTCCAAGCTCCCACAGAAGA 59.020 55.000 0.00 0.00 0.00 2.87
3521 3588 1.837051 ACGTCTCCAAGCTCCCACA 60.837 57.895 0.00 0.00 0.00 4.17
3565 3689 5.106038 ACGAAGTACCAACGATACAAGATGA 60.106 40.000 10.10 0.00 41.94 2.92
3566 3690 5.100259 ACGAAGTACCAACGATACAAGATG 58.900 41.667 10.10 0.00 41.94 2.90
3567 3691 5.320549 ACGAAGTACCAACGATACAAGAT 57.679 39.130 10.10 0.00 41.94 2.40
3603 3727 8.040132 CACCATACAAATAATCCCACAAAACAT 58.960 33.333 0.00 0.00 0.00 2.71
3609 3733 5.575157 ACACACCATACAAATAATCCCACA 58.425 37.500 0.00 0.00 0.00 4.17
3610 3734 6.524101 AACACACCATACAAATAATCCCAC 57.476 37.500 0.00 0.00 0.00 4.61
3651 3775 8.818860 ACCCTACTCACAGTGTGTTTATAATTA 58.181 33.333 22.29 0.00 34.79 1.40
3653 3777 7.038587 TGACCCTACTCACAGTGTGTTTATAAT 60.039 37.037 22.29 5.67 34.79 1.28
3654 3778 6.268158 TGACCCTACTCACAGTGTGTTTATAA 59.732 38.462 22.29 1.54 34.79 0.98
3655 3779 5.776208 TGACCCTACTCACAGTGTGTTTATA 59.224 40.000 22.29 9.93 34.79 0.98
3656 3780 4.591498 TGACCCTACTCACAGTGTGTTTAT 59.409 41.667 22.29 9.35 34.79 1.40
3663 6826 3.827302 AGTAACTGACCCTACTCACAGTG 59.173 47.826 0.00 0.00 41.73 3.66
3664 6827 4.115398 AGTAACTGACCCTACTCACAGT 57.885 45.455 0.00 0.00 43.92 3.55
3772 6939 9.209297 CTTTAAAATTTGTAAGTTTGCAACTGC 57.791 29.630 0.00 0.00 41.91 4.40
3856 7030 9.528018 CTTAATTCCTGAAGCACACTTTTTAAA 57.472 29.630 0.00 0.00 35.82 1.52
3858 7032 8.232913 ACTTAATTCCTGAAGCACACTTTTTA 57.767 30.769 0.00 0.00 35.82 1.52
3864 7038 5.689383 TTGACTTAATTCCTGAAGCACAC 57.311 39.130 0.00 0.00 0.00 3.82
3881 7055 5.940192 TCAAAGCGTAATGTTGATTGACT 57.060 34.783 0.00 0.00 0.00 3.41
3924 7117 1.620323 CATCCCCGCTATCACAGATCA 59.380 52.381 0.00 0.00 0.00 2.92
3952 7304 0.888736 CATCACCGCCACACTCCAAA 60.889 55.000 0.00 0.00 0.00 3.28
3961 7313 1.882311 GCAACAATCATCACCGCCA 59.118 52.632 0.00 0.00 0.00 5.69
3999 7352 0.107017 CAACAGATGGCCGGATCCTT 60.107 55.000 5.05 0.00 0.00 3.36
4011 7364 1.247567 CAACCCGCCTTTCAACAGAT 58.752 50.000 0.00 0.00 0.00 2.90
4012 7365 0.821711 CCAACCCGCCTTTCAACAGA 60.822 55.000 0.00 0.00 0.00 3.41
4014 7367 1.076632 ACCAACCCGCCTTTCAACA 60.077 52.632 0.00 0.00 0.00 3.33
4031 7384 1.598701 GCCAGATCCAAGGCCAACAC 61.599 60.000 5.01 0.00 45.18 3.32
4033 7386 3.608432 GCCAGATCCAAGGCCAAC 58.392 61.111 5.01 0.00 45.18 3.77
4041 7394 1.355381 ACCTGTTCAATGCCAGATCCA 59.645 47.619 2.08 0.00 0.00 3.41
4047 7400 0.109532 TCCGAACCTGTTCAATGCCA 59.890 50.000 10.38 0.00 39.46 4.92
4048 7401 0.804989 CTCCGAACCTGTTCAATGCC 59.195 55.000 10.38 0.00 39.46 4.40
4051 7404 1.978580 AGTCCTCCGAACCTGTTCAAT 59.021 47.619 10.38 0.00 39.46 2.57
4056 7409 4.115270 GGAGTCCTCCGAACCTGT 57.885 61.111 0.41 0.00 40.36 4.00
4091 7444 1.867363 AAGACTGGACTTAGCCCGAT 58.133 50.000 0.00 0.00 0.00 4.18
4101 7454 1.070289 ACCAACCTCGAAAGACTGGAC 59.930 52.381 12.02 0.00 34.77 4.02
4104 7457 2.240493 ACACCAACCTCGAAAGACTG 57.760 50.000 0.00 0.00 35.39 3.51
4107 7460 4.753107 GTGATAAACACCAACCTCGAAAGA 59.247 41.667 0.00 0.00 43.05 2.52
4114 7467 1.073284 AGCCGTGATAAACACCAACCT 59.927 47.619 0.00 0.00 45.73 3.50
4135 7488 3.521937 CCCCTAACCAGGAGATGTTAACA 59.478 47.826 11.41 11.41 45.91 2.41
4142 7495 3.222394 AGAAACCCCTAACCAGGAGAT 57.778 47.619 0.00 0.00 45.91 2.75
4143 7496 2.735259 AGAAACCCCTAACCAGGAGA 57.265 50.000 0.00 0.00 45.91 3.71
4150 7503 4.023450 GCACACACTAAAGAAACCCCTAAC 60.023 45.833 0.00 0.00 0.00 2.34
4151 7504 4.139038 GCACACACTAAAGAAACCCCTAA 58.861 43.478 0.00 0.00 0.00 2.69
4164 7517 3.081061 CAGGCCATTTTAGCACACACTA 58.919 45.455 5.01 0.00 0.00 2.74
4169 7522 0.541530 TGGCAGGCCATTTTAGCACA 60.542 50.000 9.35 0.00 41.89 4.57
4170 7523 0.174162 CTGGCAGGCCATTTTAGCAC 59.826 55.000 14.30 0.00 46.15 4.40
4171 7524 0.971959 CCTGGCAGGCCATTTTAGCA 60.972 55.000 22.68 0.00 46.15 3.49
4172 7525 0.972471 ACCTGGCAGGCCATTTTAGC 60.972 55.000 33.04 0.00 46.15 3.09
4173 7526 1.106285 GACCTGGCAGGCCATTTTAG 58.894 55.000 33.04 6.76 46.15 1.85
4174 7527 0.407528 TGACCTGGCAGGCCATTTTA 59.592 50.000 33.04 7.49 46.15 1.52
4175 7528 0.252375 ATGACCTGGCAGGCCATTTT 60.252 50.000 33.04 12.99 46.15 1.82
4176 7529 0.974010 CATGACCTGGCAGGCCATTT 60.974 55.000 29.91 13.02 46.15 2.32
4177 7530 1.380785 CATGACCTGGCAGGCCATT 60.381 57.895 29.91 13.43 46.15 3.16
4178 7531 1.866483 TTCATGACCTGGCAGGCCAT 61.866 55.000 33.04 30.06 46.15 4.40
4179 7532 2.488771 CTTCATGACCTGGCAGGCCA 62.489 60.000 33.04 29.15 45.02 5.36
4180 7533 1.751927 CTTCATGACCTGGCAGGCC 60.752 63.158 33.04 23.87 39.63 5.19
4181 7534 1.751927 CCTTCATGACCTGGCAGGC 60.752 63.158 33.04 24.36 39.63 4.85
4182 7535 1.077212 CCCTTCATGACCTGGCAGG 60.077 63.158 31.62 31.62 42.49 4.85
4183 7536 1.751927 GCCCTTCATGACCTGGCAG 60.752 63.158 19.44 7.75 41.76 4.85
4184 7537 2.356278 GCCCTTCATGACCTGGCA 59.644 61.111 19.44 0.00 41.76 4.92
4185 7538 2.440980 GGCCCTTCATGACCTGGC 60.441 66.667 17.16 17.16 41.42 4.85
4186 7539 2.124570 CGGCCCTTCATGACCTGG 60.125 66.667 0.00 0.00 0.00 4.45
4187 7540 2.124570 CCGGCCCTTCATGACCTG 60.125 66.667 0.00 0.00 0.00 4.00
4188 7541 3.411517 CCCGGCCCTTCATGACCT 61.412 66.667 0.00 0.00 0.00 3.85
4189 7542 4.506255 CCCCGGCCCTTCATGACC 62.506 72.222 0.00 0.00 0.00 4.02
4190 7543 4.506255 CCCCCGGCCCTTCATGAC 62.506 72.222 0.00 0.00 0.00 3.06
4191 7544 4.750695 TCCCCCGGCCCTTCATGA 62.751 66.667 0.00 0.00 0.00 3.07
4192 7545 4.506255 GTCCCCCGGCCCTTCATG 62.506 72.222 0.00 0.00 0.00 3.07
4203 7556 4.029809 CACCCAGGTTCGTCCCCC 62.030 72.222 0.00 0.00 36.75 5.40
4204 7557 4.717313 GCACCCAGGTTCGTCCCC 62.717 72.222 0.00 0.00 36.75 4.81
4205 7558 3.637273 AGCACCCAGGTTCGTCCC 61.637 66.667 0.00 0.00 36.75 4.46
4206 7559 2.185310 ATCAGCACCCAGGTTCGTCC 62.185 60.000 0.00 0.00 0.00 4.79
4207 7560 0.741221 GATCAGCACCCAGGTTCGTC 60.741 60.000 0.00 0.00 0.00 4.20
4208 7561 1.194781 AGATCAGCACCCAGGTTCGT 61.195 55.000 0.00 0.00 0.00 3.85
4209 7562 0.036010 AAGATCAGCACCCAGGTTCG 60.036 55.000 0.00 0.00 0.00 3.95
4210 7563 1.743996 GAAGATCAGCACCCAGGTTC 58.256 55.000 0.00 0.00 0.00 3.62
4211 7564 0.036010 CGAAGATCAGCACCCAGGTT 60.036 55.000 0.00 0.00 0.00 3.50
4212 7565 1.599047 CGAAGATCAGCACCCAGGT 59.401 57.895 0.00 0.00 0.00 4.00
4213 7566 1.153289 CCGAAGATCAGCACCCAGG 60.153 63.158 0.00 0.00 0.00 4.45
4214 7567 1.153289 CCCGAAGATCAGCACCCAG 60.153 63.158 0.00 0.00 0.00 4.45
4215 7568 2.989639 CCCGAAGATCAGCACCCA 59.010 61.111 0.00 0.00 0.00 4.51
4216 7569 2.514824 GCCCGAAGATCAGCACCC 60.515 66.667 0.00 0.00 0.00 4.61
4217 7570 2.514824 GGCCCGAAGATCAGCACC 60.515 66.667 0.00 0.00 0.00 5.01
4218 7571 2.514824 GGGCCCGAAGATCAGCAC 60.515 66.667 5.69 0.00 0.00 4.40
4219 7572 4.161295 CGGGCCCGAAGATCAGCA 62.161 66.667 41.82 0.00 42.83 4.41
4234 7587 3.728373 AGCAGGGCCCCTTTACGG 61.728 66.667 21.43 0.08 0.00 4.02
4235 7588 2.438434 CAGCAGGGCCCCTTTACG 60.438 66.667 21.43 0.79 0.00 3.18
4236 7589 1.937924 ATCCAGCAGGGCCCCTTTAC 61.938 60.000 21.43 3.18 36.21 2.01
4237 7590 1.622442 ATCCAGCAGGGCCCCTTTA 60.622 57.895 21.43 0.00 36.21 1.85
4238 7591 2.948924 ATCCAGCAGGGCCCCTTT 60.949 61.111 21.43 0.00 36.21 3.11
4239 7592 3.424105 GATCCAGCAGGGCCCCTT 61.424 66.667 21.43 0.00 36.21 3.95
4240 7593 4.765970 TGATCCAGCAGGGCCCCT 62.766 66.667 21.43 6.41 36.21 4.79
4241 7594 2.594365 ATTTGATCCAGCAGGGCCCC 62.594 60.000 21.43 3.37 36.21 5.80
4242 7595 0.688749 AATTTGATCCAGCAGGGCCC 60.689 55.000 16.46 16.46 36.21 5.80
4243 7596 1.959282 CTAATTTGATCCAGCAGGGCC 59.041 52.381 0.00 0.00 36.21 5.80
4244 7597 1.959282 CCTAATTTGATCCAGCAGGGC 59.041 52.381 0.00 0.00 36.21 5.19
4245 7598 2.091665 ACCCTAATTTGATCCAGCAGGG 60.092 50.000 12.57 12.57 45.65 4.45
4246 7599 2.954318 CACCCTAATTTGATCCAGCAGG 59.046 50.000 0.00 0.00 0.00 4.85
4247 7600 2.360165 GCACCCTAATTTGATCCAGCAG 59.640 50.000 0.00 0.00 0.00 4.24
4248 7601 2.025037 AGCACCCTAATTTGATCCAGCA 60.025 45.455 0.00 0.00 0.00 4.41
4249 7602 2.659428 AGCACCCTAATTTGATCCAGC 58.341 47.619 0.00 0.00 0.00 4.85
4250 7603 6.239120 CCATTTAGCACCCTAATTTGATCCAG 60.239 42.308 0.00 0.00 33.75 3.86
4251 7604 5.598005 CCATTTAGCACCCTAATTTGATCCA 59.402 40.000 0.00 0.00 33.75 3.41
4252 7605 5.509670 GCCATTTAGCACCCTAATTTGATCC 60.510 44.000 0.00 0.00 33.75 3.36
4253 7606 5.509670 GGCCATTTAGCACCCTAATTTGATC 60.510 44.000 0.00 0.00 33.75 2.92
4254 7607 4.344968 GGCCATTTAGCACCCTAATTTGAT 59.655 41.667 0.00 0.00 33.75 2.57
4255 7608 3.704061 GGCCATTTAGCACCCTAATTTGA 59.296 43.478 0.00 0.00 33.75 2.69
4256 7609 3.706086 AGGCCATTTAGCACCCTAATTTG 59.294 43.478 5.01 0.00 33.75 2.32
4257 7610 3.994317 AGGCCATTTAGCACCCTAATTT 58.006 40.909 5.01 0.00 33.75 1.82
4258 7611 3.688049 AGGCCATTTAGCACCCTAATT 57.312 42.857 5.01 0.00 33.75 1.40
4259 7612 3.498661 GCTAGGCCATTTAGCACCCTAAT 60.499 47.826 15.70 0.00 42.38 1.73
4260 7613 2.158667 GCTAGGCCATTTAGCACCCTAA 60.159 50.000 15.70 0.00 42.38 2.69
4261 7614 1.420138 GCTAGGCCATTTAGCACCCTA 59.580 52.381 15.70 0.00 42.38 3.53
4262 7615 0.183731 GCTAGGCCATTTAGCACCCT 59.816 55.000 15.70 0.00 42.38 4.34
4263 7616 0.183731 AGCTAGGCCATTTAGCACCC 59.816 55.000 21.00 0.00 44.65 4.61
4264 7617 1.134098 TCAGCTAGGCCATTTAGCACC 60.134 52.381 21.00 0.00 44.65 5.01
4265 7618 2.332063 TCAGCTAGGCCATTTAGCAC 57.668 50.000 21.00 0.00 44.65 4.40
4266 7619 2.487805 CCATCAGCTAGGCCATTTAGCA 60.488 50.000 21.00 5.37 44.65 3.49
4267 7620 2.157738 CCATCAGCTAGGCCATTTAGC 58.842 52.381 13.33 13.33 42.99 3.09
4268 7621 2.787994 CCCATCAGCTAGGCCATTTAG 58.212 52.381 5.01 0.00 0.00 1.85
4269 7622 1.202927 GCCCATCAGCTAGGCCATTTA 60.203 52.381 5.01 0.00 41.00 1.40
4270 7623 0.468771 GCCCATCAGCTAGGCCATTT 60.469 55.000 5.01 0.00 41.00 2.32
4271 7624 1.152368 GCCCATCAGCTAGGCCATT 59.848 57.895 5.01 0.00 41.00 3.16
4272 7625 2.842058 GCCCATCAGCTAGGCCAT 59.158 61.111 5.01 0.00 41.00 4.40
4275 7628 2.112718 CAGGCCCATCAGCTAGGC 59.887 66.667 0.00 7.53 46.37 3.93
4276 7629 1.449353 GTCAGGCCCATCAGCTAGG 59.551 63.158 0.00 0.00 0.00 3.02
4277 7630 1.053264 AGGTCAGGCCCATCAGCTAG 61.053 60.000 0.00 0.00 38.26 3.42
4278 7631 1.003442 AGGTCAGGCCCATCAGCTA 59.997 57.895 0.00 0.00 38.26 3.32
4279 7632 2.285969 AGGTCAGGCCCATCAGCT 60.286 61.111 0.00 0.00 38.26 4.24
4280 7633 2.124403 CAGGTCAGGCCCATCAGC 60.124 66.667 0.00 0.00 38.26 4.26
4281 7634 1.222936 GACAGGTCAGGCCCATCAG 59.777 63.158 0.00 0.00 38.26 2.90
4282 7635 1.229625 AGACAGGTCAGGCCCATCA 60.230 57.895 0.00 0.00 38.26 3.07
4283 7636 1.524482 GAGACAGGTCAGGCCCATC 59.476 63.158 0.00 0.00 38.26 3.51
4284 7637 1.997874 GGAGACAGGTCAGGCCCAT 60.998 63.158 0.00 0.00 38.26 4.00
4285 7638 2.607750 GGAGACAGGTCAGGCCCA 60.608 66.667 0.00 0.00 38.26 5.36
4286 7639 2.284995 AGGAGACAGGTCAGGCCC 60.285 66.667 0.00 0.00 38.26 5.80
4287 7640 1.610673 TCAGGAGACAGGTCAGGCC 60.611 63.158 0.00 0.00 37.58 5.19
4288 7641 1.594310 GTCAGGAGACAGGTCAGGC 59.406 63.158 1.84 0.00 44.34 4.85
4289 7642 0.609406 TCGTCAGGAGACAGGTCAGG 60.609 60.000 1.84 0.00 45.23 3.86
4290 7643 0.523966 GTCGTCAGGAGACAGGTCAG 59.476 60.000 1.84 0.00 45.23 3.51
4291 7644 0.110678 AGTCGTCAGGAGACAGGTCA 59.889 55.000 1.84 0.00 45.23 4.02
4292 7645 0.523966 CAGTCGTCAGGAGACAGGTC 59.476 60.000 0.00 0.00 45.23 3.85
4293 7646 0.896019 CCAGTCGTCAGGAGACAGGT 60.896 60.000 0.00 0.00 45.23 4.00
4294 7647 1.886585 CCAGTCGTCAGGAGACAGG 59.113 63.158 0.00 0.00 45.23 4.00
4295 7648 1.214062 GCCAGTCGTCAGGAGACAG 59.786 63.158 0.00 0.00 45.23 3.51
4296 7649 0.827925 AAGCCAGTCGTCAGGAGACA 60.828 55.000 0.00 0.00 45.23 3.41
4297 7650 1.133407 CTAAGCCAGTCGTCAGGAGAC 59.867 57.143 0.00 0.00 41.46 3.36
4298 7651 1.464734 CTAAGCCAGTCGTCAGGAGA 58.535 55.000 0.00 0.00 0.00 3.71
4299 7652 0.457851 CCTAAGCCAGTCGTCAGGAG 59.542 60.000 0.00 0.00 0.00 3.69
4300 7653 0.039180 TCCTAAGCCAGTCGTCAGGA 59.961 55.000 0.00 0.00 0.00 3.86
4301 7654 0.457851 CTCCTAAGCCAGTCGTCAGG 59.542 60.000 0.00 0.00 0.00 3.86
4302 7655 1.464734 TCTCCTAAGCCAGTCGTCAG 58.535 55.000 0.00 0.00 0.00 3.51
4303 7656 2.145397 ATCTCCTAAGCCAGTCGTCA 57.855 50.000 0.00 0.00 0.00 4.35
4304 7657 3.215975 AGTATCTCCTAAGCCAGTCGTC 58.784 50.000 0.00 0.00 0.00 4.20
4305 7658 3.215975 GAGTATCTCCTAAGCCAGTCGT 58.784 50.000 0.00 0.00 0.00 4.34
4306 7659 2.554893 GGAGTATCTCCTAAGCCAGTCG 59.445 54.545 8.38 0.00 46.41 4.18
4318 7671 1.883926 GAAGCCTCCGAGGAGTATCTC 59.116 57.143 19.33 0.00 37.67 2.75
4319 7672 1.816183 CGAAGCCTCCGAGGAGTATCT 60.816 57.143 19.33 2.06 37.67 1.98
4320 7673 0.594110 CGAAGCCTCCGAGGAGTATC 59.406 60.000 19.33 8.55 37.67 2.24
4321 7674 2.721945 CGAAGCCTCCGAGGAGTAT 58.278 57.895 19.33 0.00 37.67 2.12
4322 7675 4.237445 CGAAGCCTCCGAGGAGTA 57.763 61.111 19.33 0.00 37.67 2.59
4335 7688 4.154015 TCTTGTAAATGTCCATGTGCGAAG 59.846 41.667 0.00 0.00 0.00 3.79
4336 7689 4.068599 TCTTGTAAATGTCCATGTGCGAA 58.931 39.130 0.00 0.00 0.00 4.70
4337 7690 3.669536 TCTTGTAAATGTCCATGTGCGA 58.330 40.909 0.00 0.00 0.00 5.10
4338 7691 3.728864 GCTCTTGTAAATGTCCATGTGCG 60.729 47.826 0.00 0.00 0.00 5.34
4339 7692 3.191162 TGCTCTTGTAAATGTCCATGTGC 59.809 43.478 0.00 0.00 0.00 4.57
4340 7693 5.375417 TTGCTCTTGTAAATGTCCATGTG 57.625 39.130 0.00 0.00 0.00 3.21
4341 7694 4.460382 CCTTGCTCTTGTAAATGTCCATGT 59.540 41.667 0.00 0.00 0.00 3.21
4342 7695 4.701651 TCCTTGCTCTTGTAAATGTCCATG 59.298 41.667 0.00 0.00 0.00 3.66
4343 7696 4.922206 TCCTTGCTCTTGTAAATGTCCAT 58.078 39.130 0.00 0.00 0.00 3.41
4344 7697 4.326826 CTCCTTGCTCTTGTAAATGTCCA 58.673 43.478 0.00 0.00 0.00 4.02
4345 7698 3.127721 GCTCCTTGCTCTTGTAAATGTCC 59.872 47.826 0.00 0.00 38.95 4.02
4367 7720 2.049156 TCGACGCTGCCAGAACAG 60.049 61.111 0.00 0.00 40.80 3.16
4368 7721 2.049156 CTCGACGCTGCCAGAACA 60.049 61.111 0.00 0.00 0.00 3.18
4370 7723 4.069232 CCCTCGACGCTGCCAGAA 62.069 66.667 0.00 0.00 0.00 3.02
4374 7727 4.593864 GATCCCCTCGACGCTGCC 62.594 72.222 0.00 0.00 0.00 4.85
4375 7728 3.781770 CTGATCCCCTCGACGCTGC 62.782 68.421 0.00 0.00 0.00 5.25
4376 7729 1.667154 TTCTGATCCCCTCGACGCTG 61.667 60.000 0.00 0.00 0.00 5.18
4378 7731 1.227002 GTTCTGATCCCCTCGACGC 60.227 63.158 0.00 0.00 0.00 5.19
4380 7733 1.338655 GCTAGTTCTGATCCCCTCGAC 59.661 57.143 0.00 0.00 0.00 4.20
4381 7734 1.215673 AGCTAGTTCTGATCCCCTCGA 59.784 52.381 0.00 0.00 0.00 4.04
4382 7735 1.611491 GAGCTAGTTCTGATCCCCTCG 59.389 57.143 0.00 0.00 0.00 4.63
4384 7737 1.578215 AGGAGCTAGTTCTGATCCCCT 59.422 52.381 6.54 0.00 40.55 4.79
4385 7738 2.095604 AGGAGCTAGTTCTGATCCCC 57.904 55.000 6.54 0.00 40.55 4.81
4386 7739 5.454045 CCTTTAAGGAGCTAGTTCTGATCCC 60.454 48.000 4.75 0.00 40.55 3.85
4387 7740 5.454045 CCCTTTAAGGAGCTAGTTCTGATCC 60.454 48.000 13.36 0.00 37.67 3.36
4388 7741 5.454045 CCCCTTTAAGGAGCTAGTTCTGATC 60.454 48.000 13.36 0.00 37.67 2.92
4390 7743 3.775316 CCCCTTTAAGGAGCTAGTTCTGA 59.225 47.826 13.36 0.00 37.67 3.27
4391 7744 3.775316 TCCCCTTTAAGGAGCTAGTTCTG 59.225 47.826 13.36 0.00 37.67 3.02
4392 7745 4.076175 TCCCCTTTAAGGAGCTAGTTCT 57.924 45.455 13.36 0.00 37.67 3.01
4393 7746 4.709250 CATCCCCTTTAAGGAGCTAGTTC 58.291 47.826 13.36 0.00 37.67 3.01
4395 7748 2.439880 GCATCCCCTTTAAGGAGCTAGT 59.560 50.000 13.36 0.00 37.67 2.57
4396 7749 2.548920 CGCATCCCCTTTAAGGAGCTAG 60.549 54.545 13.36 0.00 37.67 3.42
4397 7750 1.416401 CGCATCCCCTTTAAGGAGCTA 59.584 52.381 13.36 0.00 37.67 3.32
4398 7751 0.181350 CGCATCCCCTTTAAGGAGCT 59.819 55.000 13.36 0.00 37.67 4.09
4400 7753 2.289565 GTTCGCATCCCCTTTAAGGAG 58.710 52.381 13.36 0.00 37.67 3.69
4401 7754 1.631388 TGTTCGCATCCCCTTTAAGGA 59.369 47.619 13.36 0.00 37.67 3.36
4403 7756 2.420022 CAGTGTTCGCATCCCCTTTAAG 59.580 50.000 0.00 0.00 0.00 1.85
4404 7757 2.432444 CAGTGTTCGCATCCCCTTTAA 58.568 47.619 0.00 0.00 0.00 1.52
4405 7758 1.948611 GCAGTGTTCGCATCCCCTTTA 60.949 52.381 0.00 0.00 0.00 1.85
4406 7759 1.244019 GCAGTGTTCGCATCCCCTTT 61.244 55.000 0.00 0.00 0.00 3.11
4407 7760 1.675641 GCAGTGTTCGCATCCCCTT 60.676 57.895 0.00 0.00 0.00 3.95
4408 7761 2.045926 GCAGTGTTCGCATCCCCT 60.046 61.111 0.00 0.00 0.00 4.79
4411 7764 3.487544 GGAAATAAGCAGTGTTCGCATCC 60.488 47.826 0.00 0.00 0.00 3.51
4412 7765 3.126858 TGGAAATAAGCAGTGTTCGCATC 59.873 43.478 0.00 0.00 0.00 3.91
4413 7766 3.081061 TGGAAATAAGCAGTGTTCGCAT 58.919 40.909 0.00 0.00 0.00 4.73
4414 7767 2.483877 CTGGAAATAAGCAGTGTTCGCA 59.516 45.455 0.00 0.00 0.00 5.10
4415 7768 2.159517 CCTGGAAATAAGCAGTGTTCGC 60.160 50.000 0.00 0.00 0.00 4.70
4416 7769 2.159517 GCCTGGAAATAAGCAGTGTTCG 60.160 50.000 0.00 0.00 0.00 3.95
4417 7770 2.159517 CGCCTGGAAATAAGCAGTGTTC 60.160 50.000 0.00 0.00 0.00 3.18
4420 7773 0.734889 CCGCCTGGAAATAAGCAGTG 59.265 55.000 0.00 0.00 37.49 3.66
4421 7774 0.328258 ACCGCCTGGAAATAAGCAGT 59.672 50.000 0.00 0.00 39.21 4.40
4422 7775 1.017387 GACCGCCTGGAAATAAGCAG 58.983 55.000 0.00 0.00 39.21 4.24
4423 7776 0.742990 CGACCGCCTGGAAATAAGCA 60.743 55.000 0.00 0.00 39.21 3.91
4424 7777 0.743345 ACGACCGCCTGGAAATAAGC 60.743 55.000 0.00 0.00 39.21 3.09
4425 7778 1.287425 GACGACCGCCTGGAAATAAG 58.713 55.000 0.00 0.00 39.21 1.73
4426 7779 0.609151 TGACGACCGCCTGGAAATAA 59.391 50.000 0.00 0.00 39.21 1.40
4427 7780 0.609151 TTGACGACCGCCTGGAAATA 59.391 50.000 0.00 0.00 39.21 1.40
4429 7782 0.953471 CATTGACGACCGCCTGGAAA 60.953 55.000 0.00 0.00 39.21 3.13
4430 7783 1.375396 CATTGACGACCGCCTGGAA 60.375 57.895 0.00 0.00 39.21 3.53
4431 7784 2.264480 CATTGACGACCGCCTGGA 59.736 61.111 0.00 0.00 39.21 3.86
4432 7785 2.819595 CCATTGACGACCGCCTGG 60.820 66.667 0.00 0.00 42.84 4.45
4433 7786 3.499737 GCCATTGACGACCGCCTG 61.500 66.667 0.00 0.00 0.00 4.85
4438 7791 3.499737 CTGCGGCCATTGACGACC 61.500 66.667 2.24 0.00 0.00 4.79
4439 7792 3.499737 CCTGCGGCCATTGACGAC 61.500 66.667 2.24 0.00 0.00 4.34
4451 7804 4.481112 GGCACATTTCCGCCTGCG 62.481 66.667 4.20 4.20 45.29 5.18
4464 7817 0.394899 CCAGAGGAAAGGGATGGCAC 60.395 60.000 0.00 0.00 0.00 5.01
4466 7819 4.995594 CCAGAGGAAAGGGATGGC 57.004 61.111 0.00 0.00 0.00 4.40
4478 7831 1.719529 AGAGCATCCTCATCCCAGAG 58.280 55.000 0.00 0.00 40.68 3.35
4479 7832 2.045524 GAAGAGCATCCTCATCCCAGA 58.954 52.381 0.00 0.00 40.68 3.86
4480 7833 2.048601 AGAAGAGCATCCTCATCCCAG 58.951 52.381 0.00 0.00 40.68 4.45
4481 7834 1.767088 CAGAAGAGCATCCTCATCCCA 59.233 52.381 0.00 0.00 40.68 4.37
4482 7835 1.072015 CCAGAAGAGCATCCTCATCCC 59.928 57.143 0.00 0.00 40.68 3.85
4483 7836 2.045524 TCCAGAAGAGCATCCTCATCC 58.954 52.381 0.00 0.00 40.68 3.51
4484 7837 3.834489 TTCCAGAAGAGCATCCTCATC 57.166 47.619 0.00 0.00 40.68 2.92
4485 7838 3.684981 GCTTTCCAGAAGAGCATCCTCAT 60.685 47.826 8.66 0.00 40.68 2.90
4486 7839 2.355513 GCTTTCCAGAAGAGCATCCTCA 60.356 50.000 8.66 0.00 40.68 3.86
4487 7840 2.287769 GCTTTCCAGAAGAGCATCCTC 58.712 52.381 8.66 0.00 36.45 3.71
4488 7841 1.064832 GGCTTTCCAGAAGAGCATCCT 60.065 52.381 13.05 0.00 38.14 3.24
4489 7842 1.387539 GGCTTTCCAGAAGAGCATCC 58.612 55.000 13.05 0.00 38.14 3.51
4490 7843 1.340405 TGGGCTTTCCAGAAGAGCATC 60.340 52.381 13.05 7.75 41.46 3.91
4491 7844 0.700564 TGGGCTTTCCAGAAGAGCAT 59.299 50.000 13.05 0.00 41.46 3.79
4492 7845 2.154139 TGGGCTTTCCAGAAGAGCA 58.846 52.632 13.05 0.00 41.46 4.26
4500 7853 0.620556 GATGTCCTCTGGGCTTTCCA 59.379 55.000 0.00 0.00 44.79 3.53
4503 7856 1.065854 CGAAGATGTCCTCTGGGCTTT 60.066 52.381 0.00 0.00 33.29 3.51
4504 7857 0.539051 CGAAGATGTCCTCTGGGCTT 59.461 55.000 0.00 0.00 33.29 4.35
4506 7859 1.522580 GCGAAGATGTCCTCTGGGC 60.523 63.158 0.00 0.00 33.29 5.36
4507 7860 1.144936 GGCGAAGATGTCCTCTGGG 59.855 63.158 0.00 0.00 33.29 4.45
4508 7861 1.144936 GGGCGAAGATGTCCTCTGG 59.855 63.158 0.00 0.00 33.29 3.86
4509 7862 0.467384 ATGGGCGAAGATGTCCTCTG 59.533 55.000 0.00 0.00 33.29 3.35
4510 7863 2.088104 TATGGGCGAAGATGTCCTCT 57.912 50.000 0.00 0.00 34.96 3.69
4511 7864 3.409026 AATATGGGCGAAGATGTCCTC 57.591 47.619 0.00 0.00 0.00 3.71
4513 7866 4.642429 AGTAAATATGGGCGAAGATGTCC 58.358 43.478 0.00 0.00 0.00 4.02
4515 7868 5.552870 AGAGTAAATATGGGCGAAGATGT 57.447 39.130 0.00 0.00 0.00 3.06
4517 7870 6.831976 AGAAAGAGTAAATATGGGCGAAGAT 58.168 36.000 0.00 0.00 0.00 2.40
4518 7871 6.235231 AGAAAGAGTAAATATGGGCGAAGA 57.765 37.500 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.