AutoCloner

Multiple sequence alignment - TraesCS5B01G029700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5B01G029700	chr5B	100.000	6028	0	0	1	6028	31119081	31113054	0.000000e+00	11132.0
1	TraesCS5B01G029700	chr5B	88.258	1056	95	19	4465	5512	24316096	24317130	0.000000e+00	1236.0
2	TraesCS5B01G029700	chr5B	87.985	1057	96	20	4465	5512	24376295	24377329	0.000000e+00	1219.0
3	TraesCS5B01G029700	chr5B	87.879	1056	99	20	4465	5512	24333356	24334390	0.000000e+00	1214.0
4	TraesCS5B01G029700	chr5B	87.583	1055	103	19	4465	5512	24359069	24360102	0.000000e+00	1197.0
5	TraesCS5B01G029700	chr5B	87.828	953	86	18	4569	5512	24298664	24299595	0.000000e+00	1090.0
6	TraesCS5B01G029700	chr5B	89.059	914	38	19	2986	3838	544918136	544919048	0.000000e+00	1077.0
7	TraesCS5B01G029700	chr5B	95.017	602	29	1	1359	1960	24374614	24375214	0.000000e+00	944.0
8	TraesCS5B01G029700	chr5B	94.684	602	31	1	1359	1960	24314074	24314674	0.000000e+00	933.0
9	TraesCS5B01G029700	chr5B	95.972	571	19	4	2427	2994	659964762	659964193	0.000000e+00	924.0
10	TraesCS5B01G029700	chr5B	94.186	602	34	1	1359	1960	24331334	24331934	0.000000e+00	917.0
11	TraesCS5B01G029700	chr5B	93.894	606	32	3	1359	1960	6659620	6660224	0.000000e+00	909.0
12	TraesCS5B01G029700	chr5B	95.113	573	21	6	2423	2991	590498720	590499289	0.000000e+00	896.0
13	TraesCS5B01G029700	chr5B	95.255	569	18	6	2427	2988	26864438	26863872	0.000000e+00	893.0
14	TraesCS5B01G029700	chr5B	95.761	401	16	1	1561	1960	24357247	24357647	0.000000e+00	645.0
15	TraesCS5B01G029700	chr5B	84.349	607	35	17	746	1312	24313489	24314075	1.910000e-149	540.0
16	TraesCS5B01G029700	chr5B	84.020	607	37	17	746	1312	24330749	24331335	4.140000e-146	529.0
17	TraesCS5B01G029700	chr5B	83.660	612	35	18	746	1312	24374024	24374615	3.220000e-142	516.0
18	TraesCS5B01G029700	chr5B	85.366	451	40	12	2001	2429	6660228	6660674	1.540000e-120	444.0
19	TraesCS5B01G029700	chr5B	85.202	446	44	9	2001	2426	24314678	24315121	7.170000e-119	438.0
20	TraesCS5B01G029700	chr5B	85.202	446	44	9	2001	2426	24331938	24332381	7.170000e-119	438.0
21	TraesCS5B01G029700	chr5B	85.202	446	44	9	2001	2426	24375218	24375661	7.170000e-119	438.0
22	TraesCS5B01G029700	chr5B	86.298	416	34	13	915	1312	6659211	6659621	1.200000e-116	431.0
23	TraesCS5B01G029700	chr5B	84.753	446	46	9	2001	2426	24357651	24358094	1.550000e-115	427.0
24	TraesCS5B01G029700	chr5B	92.058	277	16	5	2986	3261	590499346	590499617	9.480000e-103	385.0
25	TraesCS5B01G029700	chr5B	95.436	241	9	2	2986	3226	590793087	590793325	3.410000e-102	383.0
26	TraesCS5B01G029700	chr5B	81.606	386	48	9	3909	4275	6660669	6661050	1.270000e-76	298.0
27	TraesCS5B01G029700	chr5B	88.618	246	26	2	5505	5749	24426141	24425897	1.270000e-76	298.0
28	TraesCS5B01G029700	chr5B	88.623	167	19	0	5583	5749	6687210	6687044	2.850000e-48	204.0
29	TraesCS5B01G029700	chr5B	89.583	144	13	2	399	541	24373875	24374017	1.330000e-41	182.0
30	TraesCS5B01G029700	chr5B	89.583	144	12	3	399	541	24330601	24330742	4.800000e-41	180.0
31	TraesCS5B01G029700	chr5B	91.339	127	11	0	3915	4041	24375668	24375794	2.230000e-39	174.0
32	TraesCS5B01G029700	chr5B	90.551	127	12	0	3915	4041	24315128	24315254	1.040000e-37	169.0
33	TraesCS5B01G029700	chr5B	80.995	221	31	5	4067	4284	24315557	24315769	1.340000e-36	165.0
34	TraesCS5B01G029700	chr5B	89.764	127	13	0	3915	4041	24332388	24332514	4.830000e-36	163.0
35	TraesCS5B01G029700	chr5B	80.543	221	32	5	4067	4284	24332816	24333028	6.250000e-35	159.0
36	TraesCS5B01G029700	chr5B	80.543	221	32	5	4067	4284	24358530	24358742	6.250000e-35	159.0
37	TraesCS5B01G029700	chr5B	92.308	78	5	1	5505	5582	6694284	6694208	6.390000e-20	110.0
38	TraesCS5B01G029700	chr5B	96.667	60	1	1	3850	3909	590500113	590500171	1.380000e-16	99.0
39	TraesCS5B01G029700	chr5B	86.250	80	9	2	1295	1374	55537234	55537157	1.080000e-12	86.1
40	TraesCS5B01G029700	chr5D	89.328	1518	127	25	4465	5960	5117487	5115983	0.000000e+00	1873.0
41	TraesCS5B01G029700	chr5D	86.311	1198	106	35	746	1910	5119226	5118054	0.000000e+00	1251.0
42	TraesCS5B01G029700	chr5D	88.832	788	39	20	3055	3838	482327429	482326687	0.000000e+00	922.0
43	TraesCS5B01G029700	chr5D	88.360	799	42	25	3055	3849	432690339	432689588	0.000000e+00	913.0
44	TraesCS5B01G029700	chr5D	83.733	1002	109	26	971	1953	5164361	5163395	0.000000e+00	898.0
45	TraesCS5B01G029700	chr5D	86.658	787	42	32	3069	3847	526297486	526298217	0.000000e+00	813.0
46	TraesCS5B01G029700	chr5D	92.059	340	19	7	4703	5041	5154282	5153950	7.070000e-129	472.0
47	TraesCS5B01G029700	chr5D	86.024	415	34	16	2001	2393	5118020	5117608	2.010000e-114	424.0
48	TraesCS5B01G029700	chr5D	82.075	424	27	15	498	892	5164813	5164410	3.510000e-82	316.0
49	TraesCS5B01G029700	chr5D	90.625	128	12	0	4347	4474	371802649	371802522	2.890000e-38	171.0
50	TraesCS5B01G029700	chr5A	84.028	1440	125	45	588	1960	3698573	3699974	0.000000e+00	1288.0
51	TraesCS5B01G029700	chr5A	90.945	762	47	15	4463	5219	3700885	3701629	0.000000e+00	1005.0
52	TraesCS5B01G029700	chr5A	85.190	736	58	23	3055	3753	696687892	696687171	0.000000e+00	708.0
53	TraesCS5B01G029700	chr5A	90.667	525	44	3	1438	1960	3556109	3556630	0.000000e+00	693.0
54	TraesCS5B01G029700	chr5A	92.760	442	29	2	3908	4349	3700449	3700887	2.370000e-178	636.0
55	TraesCS5B01G029700	chr5A	91.040	346	23	6	4697	5041	3558752	3559090	1.530000e-125	460.0
56	TraesCS5B01G029700	chr5A	85.904	376	45	5	3908	4276	3557118	3557492	1.570000e-105	394.0
57	TraesCS5B01G029700	chr5A	88.667	300	25	5	915	1206	3555604	3555902	2.070000e-94	357.0
58	TraesCS5B01G029700	chr5A	86.408	309	20	5	2139	2429	3700151	3700455	9.750000e-83	318.0
59	TraesCS5B01G029700	chr5A	87.018	285	13	9	416	698	3555174	3555436	3.530000e-77	300.0
60	TraesCS5B01G029700	chr5A	96.907	97	3	0	5205	5301	3701944	3702040	4.830000e-36	163.0
61	TraesCS5B01G029700	chr5A	80.247	162	11	7	746	892	3555452	3555607	1.070000e-17	102.0
62	TraesCS5B01G029700	chr6A	90.201	796	45	26	3055	3839	504000380	504001153	0.000000e+00	1007.0
63	TraesCS5B01G029700	chr6A	92.500	120	9	0	4346	4465	272995016	272994897	8.030000e-39	172.0
64	TraesCS5B01G029700	chr6A	90.323	124	12	0	4347	4470	168121044	168120921	4.830000e-36	163.0
65	TraesCS5B01G029700	chr6A	85.938	64	6	3	5960	6023	156672184	156672244	1.400000e-06	65.8
66	TraesCS5B01G029700	chr6A	94.872	39	2	0	5960	5998	469997611	469997573	1.810000e-05	62.1
67	TraesCS5B01G029700	chr1B	90.771	726	37	19	2986	3693	11127516	11128229	0.000000e+00	942.0
68	TraesCS5B01G029700	chr1B	93.548	124	7	1	4341	4464	611680418	611680540	3.710000e-42	183.0
69	TraesCS5B01G029700	chr1B	87.640	89	4	5	3820	3907	660970582	660970664	4.970000e-16	97.1
70	TraesCS5B01G029700	chr1B	96.552	58	1	1	3851	3908	11128481	11128537	1.790000e-15	95.3
71	TraesCS5B01G029700	chr1B	90.741	54	3	2	5959	6011	310313639	310313587	3.010000e-08	71.3
72	TraesCS5B01G029700	chr1B	90.566	53	3	2	5960	6011	647030160	647030211	1.080000e-07	69.4
73	TraesCS5B01G029700	chr1B	93.333	45	3	0	5957	6001	428051035	428051079	3.900000e-07	67.6
74	TraesCS5B01G029700	chr1B	88.889	54	5	1	5948	6000	292673734	292673681	1.400000e-06	65.8
75	TraesCS5B01G029700	chr3B	87.108	861	64	25	2427	3263	36392457	36393294	0.000000e+00	931.0
76	TraesCS5B01G029700	chr3B	95.079	569	22	6	2427	2991	545570741	545571307	0.000000e+00	891.0
77	TraesCS5B01G029700	chr3B	90.015	681	37	20	3175	3838	758164417	758165083	0.000000e+00	852.0
78	TraesCS5B01G029700	chr3B	92.333	600	29	7	2427	3018	758123838	758124428	0.000000e+00	837.0
79	TraesCS5B01G029700	chr3B	89.936	467	15	7	3253	3710	757793621	757793178	1.880000e-159	573.0
80	TraesCS5B01G029700	chr3B	86.389	360	25	16	2949	3306	758173087	758173424	7.380000e-99	372.0
81	TraesCS5B01G029700	chr3B	96.825	63	1	1	3851	3913	509098304	509098243	2.970000e-18	104.0
82	TraesCS5B01G029700	chr3B	95.238	63	2	1	3851	3913	509458797	509458736	1.380000e-16	99.0
83	TraesCS5B01G029700	chr3B	88.889	63	4	3	5951	6011	805611157	805611218	2.330000e-09	75.0
84	TraesCS5B01G029700	chr3B	87.302	63	5	3	5951	6011	805617944	805618005	1.080000e-07	69.4
85	TraesCS5B01G029700	chr3B	95.000	40	2	0	4311	4350	254035596	254035557	5.040000e-06	63.9
86	TraesCS5B01G029700	chr2D	88.354	790	68	14	3055	3838	475987747	475986976	0.000000e+00	928.0
87	TraesCS5B01G029700	chr2D	87.484	791	73	14	3055	3838	12352477	12353248	0.000000e+00	889.0
88	TraesCS5B01G029700	chr2D	96.117	412	11	4	3429	3838	543069335	543069743	0.000000e+00	667.0
89	TraesCS5B01G029700	chr2D	93.393	333	17	2	3055	3386	544235568	544235240	7.020000e-134	488.0
90	TraesCS5B01G029700	chr2D	92.000	125	10	0	4347	4471	247820517	247820393	6.210000e-40	176.0
91	TraesCS5B01G029700	chr2D	93.277	119	8	0	4346	4464	586154927	586154809	6.210000e-40	176.0
92	TraesCS5B01G029700	chr2D	92.437	119	9	0	4346	4464	109700467	109700349	2.890000e-38	171.0
93	TraesCS5B01G029700	chr2D	88.571	140	12	3	4346	4483	114520402	114520265	3.740000e-37	167.0
94	TraesCS5B01G029700	chr2D	78.804	184	27	8	4465	4640	139534663	139534842	4.940000e-21	113.0
95	TraesCS5B01G029700	chr2D	86.667	60	6	2	5960	6019	141504773	141504716	1.400000e-06	65.8
96	TraesCS5B01G029700	chr3D	89.390	754	53	20	3100	3838	17851265	17850524	0.000000e+00	924.0
97	TraesCS5B01G029700	chr3D	86.736	769	37	31	3076	3838	27299738	27299029	0.000000e+00	795.0
98	TraesCS5B01G029700	chr3D	89.168	637	45	17	3055	3679	601693117	601693741	0.000000e+00	773.0
99	TraesCS5B01G029700	chr3D	82.445	638	67	24	2637	3263	610530538	610531141	3.220000e-142	516.0
100	TraesCS5B01G029700	chr3D	93.220	118	8	0	4347	4464	546294405	546294288	2.230000e-39	174.0
101	TraesCS5B01G029700	chr3D	94.828	58	2	1	3851	3908	574612794	574612850	8.320000e-14	89.8
102	TraesCS5B01G029700	chr3D	90.769	65	4	2	3851	3915	575143169	575143231	1.080000e-12	86.1
103	TraesCS5B01G029700	chr3D	89.552	67	5	2	3851	3917	542134782	542134846	3.870000e-12	84.2
104	TraesCS5B01G029700	chr3D	86.154	65	5	4	5959	6023	571858296	571858236	3.900000e-07	67.6
105	TraesCS5B01G029700	chr3D	95.000	40	2	0	4311	4350	175013607	175013568	5.040000e-06	63.9
106	TraesCS5B01G029700	chr3D	92.683	41	3	0	5960	6000	293040107	293040067	6.520000e-05	60.2
107	TraesCS5B01G029700	chr4A	87.929	787	70	12	3055	3838	610331595	610332359	0.000000e+00	904.0
108	TraesCS5B01G029700	chr4A	89.751	683	27	22	3055	3725	624846327	624846978	0.000000e+00	833.0
109	TraesCS5B01G029700	chr4A	93.116	276	14	5	2986	3261	656712032	656712302	3.380000e-107	399.0
110	TraesCS5B01G029700	chr4A	96.667	60	1	1	3850	3909	666928323	666928265	1.380000e-16	99.0
111	TraesCS5B01G029700	chr4A	95.082	61	1	2	3851	3911	656712786	656712844	1.790000e-15	95.3
112	TraesCS5B01G029700	chr4A	94.915	59	2	1	3851	3909	29733513	29733570	2.310000e-14	91.6
113	TraesCS5B01G029700	chr4A	92.308	52	1	3	5960	6010	165556557	165556508	3.010000e-08	71.3
114	TraesCS5B01G029700	chr4A	89.286	56	4	2	5960	6015	728875336	728875389	1.080000e-07	69.4
115	TraesCS5B01G029700	chr4A	95.122	41	2	0	5960	6000	655638951	655638991	1.400000e-06	65.8
116	TraesCS5B01G029700	chr4A	92.308	39	0	2	4545	4580	595877610	595877572	1.100000e-02	52.8
117	TraesCS5B01G029700	chr7B	95.113	573	23	4	2427	2994	547502925	547502353	0.000000e+00	898.0
118	TraesCS5B01G029700	chr7B	94.921	571	23	4	2427	2994	547443416	547442849	0.000000e+00	889.0
119	TraesCS5B01G029700	chr7B	85.647	850	81	18	2427	3263	718202942	718202121	0.000000e+00	856.0
120	TraesCS5B01G029700	chr7B	87.885	520	36	18	2752	3261	160918186	160917684	2.420000e-163	586.0
121	TraesCS5B01G029700	chr7B	90.840	131	10	2	4339	4468	152473000	152472871	2.230000e-39	174.0
122	TraesCS5B01G029700	chr7B	98.276	58	0	1	3851	3908	59684740	59684796	3.840000e-17	100.0
123	TraesCS5B01G029700	chr7B	86.022	93	7	4	3820	3911	677510451	677510538	1.790000e-15	95.3
124	TraesCS5B01G029700	chr7B	87.500	64	5	3	5960	6023	145542713	145542653	3.010000e-08	71.3
125	TraesCS5B01G029700	chr6B	94.828	580	19	7	2425	2994	157942523	157941945	0.000000e+00	894.0
126	TraesCS5B01G029700	chr6B	93.525	278	14	3	2986	3263	677771396	677771669	1.560000e-110	411.0
127	TraesCS5B01G029700	chr6B	89.362	141	11	4	4337	4474	293966159	293966298	2.230000e-39	174.0
128	TraesCS5B01G029700	chr6B	98.246	57	0	1	3851	3907	10007444	10007499	1.380000e-16	99.0
129	TraesCS5B01G029700	chr6B	96.610	59	1	1	3851	3909	159183263	159183206	4.970000e-16	97.1
130	TraesCS5B01G029700	chr6B	90.566	53	3	2	5960	6011	226746771	226746822	1.080000e-07	69.4
131	TraesCS5B01G029700	chr6B	80.899	89	12	3	4549	4635	116106488	116106573	1.400000e-06	65.8
132	TraesCS5B01G029700	chrUn	94.746	571	26	3	2424	2991	182877229	182877798	0.000000e+00	885.0
133	TraesCS5B01G029700	chrUn	86.134	613	48	16	2660	3263	67078546	67079130	1.430000e-175	627.0
134	TraesCS5B01G029700	chrUn	93.898	295	12	5	2765	3057	53114571	53114861	1.990000e-119	440.0
135	TraesCS5B01G029700	chrUn	92.977	299	15	5	2768	3062	464795487	464795783	1.200000e-116	431.0
136	TraesCS5B01G029700	chrUn	91.525	118	10	0	4347	4464	27088338	27088455	4.830000e-36	163.0
137	TraesCS5B01G029700	chrUn	90.678	118	11	0	4347	4464	76767022	76767139	2.250000e-34	158.0
138	TraesCS5B01G029700	chrUn	88.095	126	15	0	4339	4464	304758204	304758329	3.760000e-32	150.0
139	TraesCS5B01G029700	chrUn	88.095	126	15	0	4339	4464	310445327	310445452	3.760000e-32	150.0
140	TraesCS5B01G029700	chrUn	86.822	129	13	4	4347	4475	190882842	190882718	2.270000e-29	141.0
141	TraesCS5B01G029700	chrUn	83.444	151	20	3	3762	3908	104749924	104750073	1.050000e-27	135.0
142	TraesCS5B01G029700	chrUn	90.110	91	8	1	4376	4465	100370654	100370744	3.820000e-22	117.0
143	TraesCS5B01G029700	chrUn	82.031	128	13	4	4347	4464	132142243	132142116	3.840000e-17	100.0
144	TraesCS5B01G029700	chrUn	98.246	57	0	1	3851	3907	75903315	75903260	1.380000e-16	99.0
145	TraesCS5B01G029700	chrUn	98.246	57	0	1	3851	3907	392590416	392590361	1.380000e-16	99.0
146	TraesCS5B01G029700	chrUn	93.443	61	2	2	3851	3911	35772064	35772006	8.320000e-14	89.8
147	TraesCS5B01G029700	chrUn	94.828	58	2	1	3851	3908	41412151	41412095	8.320000e-14	89.8
148	TraesCS5B01G029700	chrUn	94.828	58	2	1	3851	3908	200934168	200934224	8.320000e-14	89.8
149	TraesCS5B01G029700	chrUn	94.737	57	2	1	3851	3907	9323920	9323865	2.990000e-13	87.9
150	TraesCS5B01G029700	chrUn	94.737	57	2	1	3851	3907	35538124	35538179	2.990000e-13	87.9
151	TraesCS5B01G029700	chrUn	94.737	57	2	1	3852	3908	104749344	104749399	2.990000e-13	87.9
152	TraesCS5B01G029700	chrUn	90.698	43	4	0	5959	6001	16706548	16706590	2.350000e-04	58.4
153	TraesCS5B01G029700	chrUn	90.698	43	4	0	5959	6001	16724505	16724547	2.350000e-04	58.4
154	TraesCS5B01G029700	chr6D	91.167	634	34	15	3067	3689	467056396	467055774	0.000000e+00	841.0
155	TraesCS5B01G029700	chr6D	91.406	128	10	1	4346	4473	128316221	128316095	2.230000e-39	174.0
156	TraesCS5B01G029700	chr6D	92.063	126	7	3	4340	4462	178852326	178852201	2.230000e-39	174.0
157	TraesCS5B01G029700	chr6D	86.885	61	4	3	1414	1472	462213521	462213463	1.400000e-06	65.8
158	TraesCS5B01G029700	chr7A	85.932	789	82	17	3055	3838	51157629	51156865	0.000000e+00	815.0
159	TraesCS5B01G029700	chr7A	88.450	658	58	13	3055	3710	51076763	51076122	0.000000e+00	778.0
160	TraesCS5B01G029700	chr1A	89.207	593	38	19	3291	3871	590096948	590097526	0.000000e+00	717.0
161	TraesCS5B01G029700	chr1A	90.400	125	11	1	4341	4465	188148767	188148890	4.830000e-36	163.0
162	TraesCS5B01G029700	chr1A	100.000	28	0	0	5958	5985	92474045	92474072	1.100000e-02	52.8
163	TraesCS5B01G029700	chr4B	86.891	534	45	18	2737	3254	194454119	194453595	5.240000e-160	575.0
164	TraesCS5B01G029700	chr3A	93.388	121	8	0	4345	4465	108378993	108378873	4.800000e-41	180.0
165	TraesCS5B01G029700	chr4D	91.603	131	8	3	4336	4464	451288946	451288817	1.730000e-40	178.0
166	TraesCS5B01G029700	chr4D	90.909	121	11	0	4344	4464	55352438	55352558	4.830000e-36	163.0
167	TraesCS5B01G029700	chr4D	90.909	121	11	0	4344	4464	337412283	337412403	4.830000e-36	163.0
168	TraesCS5B01G029700	chr4D	90.833	120	11	0	4346	4465	367720660	367720541	1.740000e-35	161.0
169	TraesCS5B01G029700	chr4D	90.756	119	11	0	4347	4465	367720887	367720769	6.250000e-35	159.0
170	TraesCS5B01G029700	chr4D	90.678	118	11	0	4347	4464	27156537	27156420	2.250000e-34	158.0
171	TraesCS5B01G029700	chr4D	94.828	58	2	1	3851	3908	56257201	56257257	8.320000e-14	89.8
172	TraesCS5B01G029700	chr4D	83.529	85	10	2	3823	3907	59472245	59472165	6.480000e-10	76.8
173	TraesCS5B01G029700	chr4D	100.000	28	0	0	5960	5987	20900693	20900666	1.100000e-02	52.8
174	TraesCS5B01G029700	chr1D	92.373	118	9	0	4347	4464	116548340	116548457	1.040000e-37	169.0
175	TraesCS5B01G029700	chr1D	89.764	127	10	3	4341	4465	109978461	109978336	6.250000e-35	159.0
176	TraesCS5B01G029700	chr1D	89.683	126	11	2	4346	4469	470620845	470620970	6.250000e-35	159.0
177	TraesCS5B01G029700	chr1D	88.506	87	5	4	3823	3909	485246512	485246431	3.840000e-17	100.0
178	TraesCS5B01G029700	chr1D	91.935	62	4	1	3850	3911	427326621	427326681	1.080000e-12	86.1
179	TraesCS5B01G029700	chr1D	88.732	71	4	4	3851	3921	440878731	440878665	3.870000e-12	84.2
180	TraesCS5B01G029700	chr1D	100.000	34	0	0	1301	1334	69616363	69616330	5.040000e-06	63.9
181	TraesCS5B01G029700	chr7D	89.706	68	5	2	3851	3918	66517797	66517732	1.080000e-12	86.1
182	TraesCS5B01G029700	chr7D	87.931	58	5	2	5959	6016	626907911	626907856	3.900000e-07	67.6

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5B01G029700	chr5B	31113054	31119081	6027	True	11132.000000	11132	100.000000	1	6028	1	chr5B.!!$R5	6027
1	TraesCS5B01G029700	chr5B	24298664	24299595	931	False	1090.000000	1090	87.828000	4569	5512	1	chr5B.!!$F1	943
2	TraesCS5B01G029700	chr5B	544918136	544919048	912	False	1077.000000	1077	89.059000	2986	3838	1	chr5B.!!$F2	852
3	TraesCS5B01G029700	chr5B	659964193	659964762	569	True	924.000000	924	95.972000	2427	2994	1	chr5B.!!$R7	567
4	TraesCS5B01G029700	chr5B	26863872	26864438	566	True	893.000000	893	95.255000	2427	2988	1	chr5B.!!$R4	561
5	TraesCS5B01G029700	chr5B	24357247	24360102	2855	False	607.000000	1197	87.160000	1561	5512	4	chr5B.!!$F7	3951
6	TraesCS5B01G029700	chr5B	24313489	24317130	3641	False	580.166667	1236	87.339833	746	5512	6	chr5B.!!$F5	4766
7	TraesCS5B01G029700	chr5B	24373875	24377329	3454	False	578.833333	1219	88.797667	399	5512	6	chr5B.!!$F8	5113
8	TraesCS5B01G029700	chr5B	6659211	6661050	1839	False	520.500000	909	86.791000	915	4275	4	chr5B.!!$F4	3360
9	TraesCS5B01G029700	chr5B	24330601	24334390	3789	False	514.285714	1214	87.311000	399	5512	7	chr5B.!!$F6	5113
10	TraesCS5B01G029700	chr5B	590498720	590500171	1451	False	460.000000	896	94.612667	2423	3909	3	chr5B.!!$F9	1486
11	TraesCS5B01G029700	chr5D	5115983	5119226	3243	True	1182.666667	1873	87.221000	746	5960	3	chr5D.!!$R5	5214
12	TraesCS5B01G029700	chr5D	482326687	482327429	742	True	922.000000	922	88.832000	3055	3838	1	chr5D.!!$R4	783
13	TraesCS5B01G029700	chr5D	432689588	432690339	751	True	913.000000	913	88.360000	3055	3849	1	chr5D.!!$R3	794
14	TraesCS5B01G029700	chr5D	526297486	526298217	731	False	813.000000	813	86.658000	3069	3847	1	chr5D.!!$F1	778
15	TraesCS5B01G029700	chr5D	5163395	5164813	1418	True	607.000000	898	82.904000	498	1953	2	chr5D.!!$R6	1455
16	TraesCS5B01G029700	chr5A	696687171	696687892	721	True	708.000000	708	85.190000	3055	3753	1	chr5A.!!$R1	698
17	TraesCS5B01G029700	chr5A	3698573	3702040	3467	False	682.000000	1288	90.209600	588	5301	5	chr5A.!!$F2	4713
18	TraesCS5B01G029700	chr5A	3555174	3559090	3916	False	384.333333	693	87.257167	416	5041	6	chr5A.!!$F1	4625
19	TraesCS5B01G029700	chr6A	504000380	504001153	773	False	1007.000000	1007	90.201000	3055	3839	1	chr6A.!!$F2	784
20	TraesCS5B01G029700	chr1B	11127516	11128537	1021	False	518.650000	942	93.661500	2986	3908	2	chr1B.!!$F5	922
21	TraesCS5B01G029700	chr3B	36392457	36393294	837	False	931.000000	931	87.108000	2427	3263	1	chr3B.!!$F1	836
22	TraesCS5B01G029700	chr3B	545570741	545571307	566	False	891.000000	891	95.079000	2427	2991	1	chr3B.!!$F2	564
23	TraesCS5B01G029700	chr3B	758164417	758165083	666	False	852.000000	852	90.015000	3175	3838	1	chr3B.!!$F4	663
24	TraesCS5B01G029700	chr3B	758123838	758124428	590	False	837.000000	837	92.333000	2427	3018	1	chr3B.!!$F3	591
25	TraesCS5B01G029700	chr2D	475986976	475987747	771	True	928.000000	928	88.354000	3055	3838	1	chr2D.!!$R5	783
26	TraesCS5B01G029700	chr2D	12352477	12353248	771	False	889.000000	889	87.484000	3055	3838	1	chr2D.!!$F1	783
27	TraesCS5B01G029700	chr3D	17850524	17851265	741	True	924.000000	924	89.390000	3100	3838	1	chr3D.!!$R1	738
28	TraesCS5B01G029700	chr3D	27299029	27299738	709	True	795.000000	795	86.736000	3076	3838	1	chr3D.!!$R2	762
29	TraesCS5B01G029700	chr3D	601693117	601693741	624	False	773.000000	773	89.168000	3055	3679	1	chr3D.!!$F4	624
30	TraesCS5B01G029700	chr3D	610530538	610531141	603	False	516.000000	516	82.445000	2637	3263	1	chr3D.!!$F5	626
31	TraesCS5B01G029700	chr4A	610331595	610332359	764	False	904.000000	904	87.929000	3055	3838	1	chr4A.!!$F2	783
32	TraesCS5B01G029700	chr4A	624846327	624846978	651	False	833.000000	833	89.751000	3055	3725	1	chr4A.!!$F3	670
33	TraesCS5B01G029700	chr4A	656712032	656712844	812	False	247.150000	399	94.099000	2986	3911	2	chr4A.!!$F6	925
34	TraesCS5B01G029700	chr7B	547502353	547502925	572	True	898.000000	898	95.113000	2427	2994	1	chr7B.!!$R5	567
35	TraesCS5B01G029700	chr7B	547442849	547443416	567	True	889.000000	889	94.921000	2427	2994	1	chr7B.!!$R4	567
36	TraesCS5B01G029700	chr7B	718202121	718202942	821	True	856.000000	856	85.647000	2427	3263	1	chr7B.!!$R6	836
37	TraesCS5B01G029700	chr7B	160917684	160918186	502	True	586.000000	586	87.885000	2752	3261	1	chr7B.!!$R3	509
38	TraesCS5B01G029700	chr6B	157941945	157942523	578	True	894.000000	894	94.828000	2425	2994	1	chr6B.!!$R1	569
39	TraesCS5B01G029700	chrUn	182877229	182877798	569	False	885.000000	885	94.746000	2424	2991	1	chrUn.!!$F9	567
40	TraesCS5B01G029700	chrUn	67078546	67079130	584	False	627.000000	627	86.134000	2660	3263	1	chrUn.!!$F6	603
41	TraesCS5B01G029700	chr6D	467055774	467056396	622	True	841.000000	841	91.167000	3067	3689	1	chr6D.!!$R4	622
42	TraesCS5B01G029700	chr7A	51156865	51157629	764	True	815.000000	815	85.932000	3055	3838	1	chr7A.!!$R2	783
43	TraesCS5B01G029700	chr7A	51076122	51076763	641	True	778.000000	778	88.450000	3055	3710	1	chr7A.!!$R1	655
44	TraesCS5B01G029700	chr1A	590096948	590097526	578	False	717.000000	717	89.207000	3291	3871	1	chr1A.!!$F3	580
45	TraesCS5B01G029700	chr4B	194453595	194454119	524	True	575.000000	575	86.891000	2737	3254	1	chr4B.!!$R1	517

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
206	207	0.036164	TGTGTACCACATGGAGCCAC	59.964	55.0	4.53	8.37	39.62	5.01	F
454	455	0.113190	AACAGGAGGGAAAGGCTTGG	59.887	55.0	0.00	0.00	0.00	3.61	F
732	766	0.744874	GGTAGGTGACGCTGATGCTA	59.255	55.0	0.00	0.00	36.97	3.49	F
2643	2904	0.322098	CCGGTTCATGGCACCAACTA	60.322	55.0	13.57	0.00	33.36	2.24	F
3839	4589	0.903236	AGCCTTTAGTCTCGGTTCCC	59.097	55.0	0.00	0.00	0.00	3.97	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1125	1230	1.078143	GCCGGAGACAAGCCAGATT	60.078	57.895	5.05	0.00	2.40	R
1619	1782	2.397044	AATTGGGGGTGAAGAGCAAA	57.603	45.000	0.00	0.00	3.68	R
2710	2972	0.672401	CGTGCCATGAACCGGTACTT	60.672	55.000	8.00	37.03	2.24	R
4614	6250	0.330604	ACTAGAGAGTACCCCACGCA	59.669	55.000	0.00	32.65	5.24	R
5626	8033	0.249398	CTTCCCACCTAAGACCACCG	59.751	60.000	0.00	0.00	4.94	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	2.584608	ATAGCTGCCGCGTCCTTT	59.415	55.556	4.92	0.00	42.32	3.11
18	19	1.820581	ATAGCTGCCGCGTCCTTTA	59.179	52.632	4.92	0.00	42.32	1.85
19	20	0.177141	ATAGCTGCCGCGTCCTTTAA	59.823	50.000	4.92	0.00	42.32	1.52
20	21	0.037139	TAGCTGCCGCGTCCTTTAAA	60.037	50.000	4.92	0.00	42.32	1.52
21	22	0.676782	AGCTGCCGCGTCCTTTAAAT	60.677	50.000	4.92	0.00	42.32	1.40
22	23	0.523335	GCTGCCGCGTCCTTTAAATG	60.523	55.000	4.92	0.00	0.00	2.32
23	24	0.523335	CTGCCGCGTCCTTTAAATGC	60.523	55.000	4.92	0.00	0.00	3.56
24	25	1.237954	TGCCGCGTCCTTTAAATGCA	61.238	50.000	4.92	0.00	0.00	3.96
25	26	0.100503	GCCGCGTCCTTTAAATGCAT	59.899	50.000	4.92	0.00	0.00	3.96
26	27	1.332375	GCCGCGTCCTTTAAATGCATA	59.668	47.619	4.92	0.00	0.00	3.14
27	28	2.031157	GCCGCGTCCTTTAAATGCATAT	60.031	45.455	4.92	0.00	0.00	1.78
28	29	3.554524	CCGCGTCCTTTAAATGCATATG	58.445	45.455	4.92	0.00	0.00	1.78
29	30	3.249799	CCGCGTCCTTTAAATGCATATGA	59.750	43.478	6.97	0.00	0.00	2.15
30	31	4.260990	CCGCGTCCTTTAAATGCATATGAA	60.261	41.667	6.97	0.00	0.00	2.57
31	32	4.905866	CGCGTCCTTTAAATGCATATGAAG	59.094	41.667	6.97	4.32	0.00	3.02
32	33	5.504010	CGCGTCCTTTAAATGCATATGAAGT	60.504	40.000	6.97	0.00	0.00	3.01
33	34	5.682862	GCGTCCTTTAAATGCATATGAAGTG	59.317	40.000	6.97	0.00	0.00	3.16
34	35	6.458206	GCGTCCTTTAAATGCATATGAAGTGA	60.458	38.462	6.97	2.12	0.00	3.41
35	36	7.128331	CGTCCTTTAAATGCATATGAAGTGAG	58.872	38.462	6.97	0.00	0.00	3.51
36	37	6.914757	GTCCTTTAAATGCATATGAAGTGAGC	59.085	38.462	6.97	0.00	0.00	4.26
37	38	6.830324	TCCTTTAAATGCATATGAAGTGAGCT	59.170	34.615	6.97	0.00	0.00	4.09
38	39	7.012704	TCCTTTAAATGCATATGAAGTGAGCTC	59.987	37.037	6.82	6.82	0.00	4.09
39	40	6.624352	TTAAATGCATATGAAGTGAGCTCC	57.376	37.500	12.15	2.40	0.00	4.70
40	41	3.851458	ATGCATATGAAGTGAGCTCCA	57.149	42.857	12.15	1.55	0.00	3.86
41	42	3.851458	TGCATATGAAGTGAGCTCCAT	57.149	42.857	12.15	9.72	0.00	3.41
42	43	4.961438	TGCATATGAAGTGAGCTCCATA	57.039	40.909	12.15	11.65	0.00	2.74
43	44	5.494390	TGCATATGAAGTGAGCTCCATAT	57.506	39.130	12.15	13.38	33.81	1.78
44	45	5.485620	TGCATATGAAGTGAGCTCCATATC	58.514	41.667	12.15	10.69	31.88	1.63
45	46	5.247792	TGCATATGAAGTGAGCTCCATATCT	59.752	40.000	12.15	0.00	31.88	1.98
46	47	5.811613	GCATATGAAGTGAGCTCCATATCTC	59.188	44.000	12.15	7.30	31.88	2.75
47	48	6.573876	GCATATGAAGTGAGCTCCATATCTCA	60.574	42.308	12.15	5.93	37.03	3.27
48	49	7.557724	CATATGAAGTGAGCTCCATATCTCAT	58.442	38.462	12.15	12.37	40.89	2.90
49	50	8.693625	CATATGAAGTGAGCTCCATATCTCATA	58.306	37.037	12.15	13.94	40.89	2.15
50	51	7.736881	ATGAAGTGAGCTCCATATCTCATAT	57.263	36.000	12.15	0.00	40.89	1.78
51	52	6.932947	TGAAGTGAGCTCCATATCTCATATG	58.067	40.000	12.15	0.00	40.89	1.78
59	60	2.196749	CATATCTCATATGGCGACCGC	58.803	52.381	5.75	5.75	39.11	5.68
69	70	2.648454	GCGACCGCCACCATTTTT	59.352	55.556	2.55	0.00	34.56	1.94
95	96	8.967664	TTGCTATAATTATACGGAGGTTTTGT	57.032	30.769	0.81	0.00	0.00	2.83
105	106	5.813080	ACGGAGGTTTTGTATATTTCTGC	57.187	39.130	0.00	0.00	0.00	4.26
106	107	5.497474	ACGGAGGTTTTGTATATTTCTGCT	58.503	37.500	0.00	0.00	0.00	4.24
107	108	5.354234	ACGGAGGTTTTGTATATTTCTGCTG	59.646	40.000	0.00	0.00	0.00	4.41
108	109	5.582550	GGAGGTTTTGTATATTTCTGCTGC	58.417	41.667	0.00	0.00	0.00	5.25
109	110	5.125417	GGAGGTTTTGTATATTTCTGCTGCA	59.875	40.000	0.88	0.88	0.00	4.41
110	111	6.183360	GGAGGTTTTGTATATTTCTGCTGCAT	60.183	38.462	1.31	0.00	0.00	3.96
111	112	6.567050	AGGTTTTGTATATTTCTGCTGCATG	58.433	36.000	1.31	0.00	0.00	4.06
112	113	5.232838	GGTTTTGTATATTTCTGCTGCATGC	59.767	40.000	11.82	11.82	43.25	4.06
122	123	4.415150	CTGCATGCAGGTCCCCGT	62.415	66.667	35.39	0.00	40.17	5.28
123	124	3.925630	CTGCATGCAGGTCCCCGTT	62.926	63.158	35.39	0.00	40.17	4.44
124	125	3.134127	GCATGCAGGTCCCCGTTC	61.134	66.667	14.21	0.00	0.00	3.95
125	126	2.438434	CATGCAGGTCCCCGTTCC	60.438	66.667	0.00	0.00	0.00	3.62
126	127	2.610859	ATGCAGGTCCCCGTTCCT	60.611	61.111	0.00	0.00	33.96	3.36
127	128	2.231380	ATGCAGGTCCCCGTTCCTT	61.231	57.895	0.00	0.00	30.91	3.36
128	129	1.789576	ATGCAGGTCCCCGTTCCTTT	61.790	55.000	0.00	0.00	30.91	3.11
129	130	1.228459	GCAGGTCCCCGTTCCTTTT	60.228	57.895	0.00	0.00	30.91	2.27
130	131	0.826256	GCAGGTCCCCGTTCCTTTTT	60.826	55.000	0.00	0.00	30.91	1.94
131	132	1.546099	GCAGGTCCCCGTTCCTTTTTA	60.546	52.381	0.00	0.00	30.91	1.52
132	133	2.866351	CAGGTCCCCGTTCCTTTTTAA	58.134	47.619	0.00	0.00	30.91	1.52
133	134	3.427573	CAGGTCCCCGTTCCTTTTTAAT	58.572	45.455	0.00	0.00	30.91	1.40
134	135	3.442625	CAGGTCCCCGTTCCTTTTTAATC	59.557	47.826	0.00	0.00	30.91	1.75
135	136	3.074836	AGGTCCCCGTTCCTTTTTAATCA	59.925	43.478	0.00	0.00	0.00	2.57
136	137	3.192001	GGTCCCCGTTCCTTTTTAATCAC	59.808	47.826	0.00	0.00	0.00	3.06
137	138	3.075884	TCCCCGTTCCTTTTTAATCACG	58.924	45.455	0.00	0.00	0.00	4.35
138	139	2.414957	CCCCGTTCCTTTTTAATCACGC	60.415	50.000	0.00	0.00	0.00	5.34
139	140	2.414957	CCCGTTCCTTTTTAATCACGCC	60.415	50.000	0.00	0.00	0.00	5.68
140	141	2.226912	CCGTTCCTTTTTAATCACGCCA	59.773	45.455	0.00	0.00	0.00	5.69
141	142	3.119637	CCGTTCCTTTTTAATCACGCCAT	60.120	43.478	0.00	0.00	0.00	4.40
142	143	4.095185	CCGTTCCTTTTTAATCACGCCATA	59.905	41.667	0.00	0.00	0.00	2.74
143	144	5.220970	CCGTTCCTTTTTAATCACGCCATAT	60.221	40.000	0.00	0.00	0.00	1.78
144	145	6.262601	CGTTCCTTTTTAATCACGCCATATT	58.737	36.000	0.00	0.00	0.00	1.28
145	146	7.411274	CGTTCCTTTTTAATCACGCCATATTA	58.589	34.615	0.00	0.00	0.00	0.98
146	147	7.375017	CGTTCCTTTTTAATCACGCCATATTAC	59.625	37.037	0.00	0.00	0.00	1.89
147	148	7.266922	TCCTTTTTAATCACGCCATATTACC	57.733	36.000	0.00	0.00	0.00	2.85
148	149	6.263617	TCCTTTTTAATCACGCCATATTACCC	59.736	38.462	0.00	0.00	0.00	3.69
149	150	6.394025	TTTTTAATCACGCCATATTACCCC	57.606	37.500	0.00	0.00	0.00	4.95
150	151	4.708576	TTAATCACGCCATATTACCCCA	57.291	40.909	0.00	0.00	0.00	4.96
151	152	2.561478	ATCACGCCATATTACCCCAC	57.439	50.000	0.00	0.00	0.00	4.61
152	153	0.470766	TCACGCCATATTACCCCACC	59.529	55.000	0.00	0.00	0.00	4.61
153	154	0.536460	CACGCCATATTACCCCACCC	60.536	60.000	0.00	0.00	0.00	4.61
154	155	0.696485	ACGCCATATTACCCCACCCT	60.696	55.000	0.00	0.00	0.00	4.34
155	156	0.036306	CGCCATATTACCCCACCCTC	59.964	60.000	0.00	0.00	0.00	4.30
156	157	0.404426	GCCATATTACCCCACCCTCC	59.596	60.000	0.00	0.00	0.00	4.30
157	158	2.051039	GCCATATTACCCCACCCTCCT	61.051	57.143	0.00	0.00	0.00	3.69
158	159	2.765630	GCCATATTACCCCACCCTCCTA	60.766	54.545	0.00	0.00	0.00	2.94
159	160	3.182152	CCATATTACCCCACCCTCCTAG	58.818	54.545	0.00	0.00	0.00	3.02
160	161	3.441054	CCATATTACCCCACCCTCCTAGT	60.441	52.174	0.00	0.00	0.00	2.57
161	162	2.984989	ATTACCCCACCCTCCTAGTT	57.015	50.000	0.00	0.00	0.00	2.24
162	163	2.747083	TTACCCCACCCTCCTAGTTT	57.253	50.000	0.00	0.00	0.00	2.66
163	164	3.870439	TTACCCCACCCTCCTAGTTTA	57.130	47.619	0.00	0.00	0.00	2.01
164	165	2.984989	ACCCCACCCTCCTAGTTTAT	57.015	50.000	0.00	0.00	0.00	1.40
165	166	2.488836	ACCCCACCCTCCTAGTTTATG	58.511	52.381	0.00	0.00	0.00	1.90
166	167	1.143073	CCCCACCCTCCTAGTTTATGC	59.857	57.143	0.00	0.00	0.00	3.14
167	168	2.127708	CCCACCCTCCTAGTTTATGCT	58.872	52.381	0.00	0.00	0.00	3.79
168	169	2.158755	CCCACCCTCCTAGTTTATGCTG	60.159	54.545	0.00	0.00	0.00	4.41
169	170	2.158755	CCACCCTCCTAGTTTATGCTGG	60.159	54.545	0.00	0.00	0.00	4.85
170	171	2.771943	CACCCTCCTAGTTTATGCTGGA	59.228	50.000	0.00	0.00	0.00	3.86
171	172	2.772515	ACCCTCCTAGTTTATGCTGGAC	59.227	50.000	0.00	0.00	0.00	4.02
172	173	2.104963	CCCTCCTAGTTTATGCTGGACC	59.895	54.545	0.00	0.00	0.00	4.46
173	174	2.771943	CCTCCTAGTTTATGCTGGACCA	59.228	50.000	0.00	0.00	0.00	4.02
174	175	3.181461	CCTCCTAGTTTATGCTGGACCAG	60.181	52.174	17.83	17.83	34.12	4.00
175	176	3.450904	TCCTAGTTTATGCTGGACCAGT	58.549	45.455	22.58	6.60	33.43	4.00
176	177	4.616553	TCCTAGTTTATGCTGGACCAGTA	58.383	43.478	22.58	19.06	33.43	2.74
177	178	4.404715	TCCTAGTTTATGCTGGACCAGTAC	59.595	45.833	22.58	12.51	33.43	2.73
178	179	4.406003	CCTAGTTTATGCTGGACCAGTACT	59.594	45.833	22.58	17.87	33.43	2.73
179	180	4.207891	AGTTTATGCTGGACCAGTACTG	57.792	45.455	22.58	16.34	33.43	2.74
180	181	3.583086	AGTTTATGCTGGACCAGTACTGT	59.417	43.478	22.58	9.64	33.43	3.55
181	182	4.041691	AGTTTATGCTGGACCAGTACTGTT	59.958	41.667	22.58	7.48	33.43	3.16
182	183	5.247564	AGTTTATGCTGGACCAGTACTGTTA	59.752	40.000	22.58	5.02	33.43	2.41
183	184	3.611766	ATGCTGGACCAGTACTGTTAC	57.388	47.619	22.58	9.04	33.43	2.50
184	185	1.621814	TGCTGGACCAGTACTGTTACC	59.378	52.381	22.58	19.07	33.43	2.85
185	186	1.403780	GCTGGACCAGTACTGTTACCG	60.404	57.143	22.58	5.91	33.43	4.02
186	187	2.165167	CTGGACCAGTACTGTTACCGA	58.835	52.381	21.18	10.54	0.00	4.69
187	188	2.758979	CTGGACCAGTACTGTTACCGAT	59.241	50.000	21.18	0.00	0.00	4.18
188	189	2.494471	TGGACCAGTACTGTTACCGATG	59.506	50.000	21.18	6.08	0.00	3.84
189	190	2.494870	GGACCAGTACTGTTACCGATGT	59.505	50.000	21.18	9.26	0.00	3.06
190	191	3.508762	GACCAGTACTGTTACCGATGTG	58.491	50.000	21.18	4.68	0.00	3.21
191	192	2.895404	ACCAGTACTGTTACCGATGTGT	59.105	45.455	21.18	5.31	0.00	3.72
192	193	4.081406	ACCAGTACTGTTACCGATGTGTA	58.919	43.478	21.18	0.00	0.00	2.90
193	194	4.082571	ACCAGTACTGTTACCGATGTGTAC	60.083	45.833	21.18	0.00	0.00	2.90
194	195	4.418392	CAGTACTGTTACCGATGTGTACC	58.582	47.826	15.06	0.00	33.06	3.34
195	196	4.081406	AGTACTGTTACCGATGTGTACCA	58.919	43.478	0.00	0.00	33.06	3.25
196	197	3.308438	ACTGTTACCGATGTGTACCAC	57.692	47.619	0.00	0.00	34.56	4.16
205	206	2.457759	TGTGTACCACATGGAGCCA	58.542	52.632	4.53	0.00	39.62	4.75
206	207	0.036164	TGTGTACCACATGGAGCCAC	59.964	55.000	4.53	8.37	39.62	5.01
207	208	0.676782	GTGTACCACATGGAGCCACC	60.677	60.000	4.53	0.00	38.94	4.61
208	209	1.077716	GTACCACATGGAGCCACCC	60.078	63.158	4.53	0.00	38.94	4.61
209	210	1.540118	TACCACATGGAGCCACCCA	60.540	57.895	4.53	0.00	41.05	4.51
211	212	0.918799	ACCACATGGAGCCACCCATA	60.919	55.000	4.53	0.00	44.69	2.74
212	213	0.479815	CCACATGGAGCCACCCATAT	59.520	55.000	0.00	0.00	44.69	1.78
213	214	1.133388	CCACATGGAGCCACCCATATT	60.133	52.381	0.00	0.00	44.69	1.28
214	215	2.233271	CACATGGAGCCACCCATATTC	58.767	52.381	0.00	0.00	44.69	1.75
215	216	1.202806	ACATGGAGCCACCCATATTCG	60.203	52.381	0.00	0.00	44.69	3.34
216	217	1.072173	CATGGAGCCACCCATATTCGA	59.928	52.381	2.98	0.00	44.69	3.71
217	218	0.468226	TGGAGCCACCCATATTCGAC	59.532	55.000	0.00	0.00	38.00	4.20
218	219	0.759346	GGAGCCACCCATATTCGACT	59.241	55.000	0.00	0.00	0.00	4.18
219	220	1.141053	GGAGCCACCCATATTCGACTT	59.859	52.381	0.00	0.00	0.00	3.01
220	221	2.421529	GGAGCCACCCATATTCGACTTT	60.422	50.000	0.00	0.00	0.00	2.66
221	222	2.614057	GAGCCACCCATATTCGACTTTG	59.386	50.000	0.00	0.00	0.00	2.77
222	223	1.065551	GCCACCCATATTCGACTTTGC	59.934	52.381	0.00	0.00	0.00	3.68
223	224	2.364632	CCACCCATATTCGACTTTGCA	58.635	47.619	0.00	0.00	0.00	4.08
224	225	2.097466	CCACCCATATTCGACTTTGCAC	59.903	50.000	0.00	0.00	0.00	4.57
225	226	2.006888	ACCCATATTCGACTTTGCACG	58.993	47.619	0.00	0.00	0.00	5.34
226	227	2.006888	CCCATATTCGACTTTGCACGT	58.993	47.619	0.00	0.00	0.00	4.49
227	228	3.191669	CCCATATTCGACTTTGCACGTA	58.808	45.455	0.00	0.00	0.00	3.57
228	229	3.807622	CCCATATTCGACTTTGCACGTAT	59.192	43.478	0.00	0.00	0.00	3.06
229	230	4.318760	CCCATATTCGACTTTGCACGTATG	60.319	45.833	0.00	0.00	0.00	2.39
230	231	4.270084	CCATATTCGACTTTGCACGTATGT	59.730	41.667	0.00	0.00	0.00	2.29
231	232	5.220586	CCATATTCGACTTTGCACGTATGTT	60.221	40.000	0.00	0.00	0.00	2.71
232	233	4.742438	ATTCGACTTTGCACGTATGTTT	57.258	36.364	0.00	0.00	0.00	2.83
233	234	3.513462	TCGACTTTGCACGTATGTTTG	57.487	42.857	0.00	0.00	0.00	2.93
234	235	3.124560	TCGACTTTGCACGTATGTTTGA	58.875	40.909	0.00	0.00	0.00	2.69
235	236	3.743911	TCGACTTTGCACGTATGTTTGAT	59.256	39.130	0.00	0.00	0.00	2.57
236	237	4.924462	TCGACTTTGCACGTATGTTTGATA	59.076	37.500	0.00	0.00	0.00	2.15
237	238	5.405873	TCGACTTTGCACGTATGTTTGATAA	59.594	36.000	0.00	0.00	0.00	1.75
238	239	6.091577	TCGACTTTGCACGTATGTTTGATAAT	59.908	34.615	0.00	0.00	0.00	1.28
239	240	6.408039	CGACTTTGCACGTATGTTTGATAATC	59.592	38.462	0.00	0.00	0.00	1.75
240	241	7.377766	ACTTTGCACGTATGTTTGATAATCT	57.622	32.000	0.00	0.00	0.00	2.40
241	242	8.487313	ACTTTGCACGTATGTTTGATAATCTA	57.513	30.769	0.00	0.00	0.00	1.98
242	243	8.941977	ACTTTGCACGTATGTTTGATAATCTAA	58.058	29.630	0.00	0.00	0.00	2.10
243	244	9.935682	CTTTGCACGTATGTTTGATAATCTAAT	57.064	29.630	0.00	0.00	0.00	1.73
244	245	9.929722	TTTGCACGTATGTTTGATAATCTAATC	57.070	29.630	0.00	0.00	0.00	1.75
245	246	8.887036	TGCACGTATGTTTGATAATCTAATCT	57.113	30.769	0.00	0.00	0.00	2.40
246	247	9.974980	TGCACGTATGTTTGATAATCTAATCTA	57.025	29.630	0.00	0.00	0.00	1.98
253	254	8.244494	TGTTTGATAATCTAATCTAGCATCGC	57.756	34.615	0.00	0.00	0.00	4.58
254	255	7.331934	TGTTTGATAATCTAATCTAGCATCGCC	59.668	37.037	0.00	0.00	0.00	5.54
255	256	6.782082	TGATAATCTAATCTAGCATCGCCT	57.218	37.500	0.00	0.00	0.00	5.52
256	257	6.567959	TGATAATCTAATCTAGCATCGCCTG	58.432	40.000	0.00	0.00	0.00	4.85
257	258	6.378280	TGATAATCTAATCTAGCATCGCCTGA	59.622	38.462	0.00	0.00	0.00	3.86
258	259	5.674052	AATCTAATCTAGCATCGCCTGAT	57.326	39.130	0.00	0.00	34.28	2.90
259	260	5.674052	ATCTAATCTAGCATCGCCTGATT	57.326	39.130	8.42	8.42	35.99	2.57
260	261	5.474578	TCTAATCTAGCATCGCCTGATTT	57.525	39.130	8.59	0.00	34.63	2.17
261	262	5.858381	TCTAATCTAGCATCGCCTGATTTT	58.142	37.500	8.59	0.00	34.63	1.82
262	263	5.928839	TCTAATCTAGCATCGCCTGATTTTC	59.071	40.000	8.59	0.00	34.63	2.29
263	264	3.827008	TCTAGCATCGCCTGATTTTCT	57.173	42.857	0.00	0.00	30.49	2.52
264	265	3.461061	TCTAGCATCGCCTGATTTTCTG	58.539	45.455	0.00	0.00	30.49	3.02
265	266	1.386533	AGCATCGCCTGATTTTCTGG	58.613	50.000	0.00	0.00	38.38	3.86
266	267	1.098050	GCATCGCCTGATTTTCTGGT	58.902	50.000	2.91	0.00	37.74	4.00
267	268	1.202222	GCATCGCCTGATTTTCTGGTG	60.202	52.381	7.45	7.45	44.30	4.17
268	269	1.402968	CATCGCCTGATTTTCTGGTGG	59.597	52.381	12.26	2.21	43.49	4.61
269	270	0.960364	TCGCCTGATTTTCTGGTGGC	60.960	55.000	12.26	0.00	43.49	5.01
270	271	1.893062	GCCTGATTTTCTGGTGGCC	59.107	57.895	0.00	0.00	37.74	5.36
271	272	0.899717	GCCTGATTTTCTGGTGGCCA	60.900	55.000	0.00	0.00	37.74	5.36
272	273	0.890683	CCTGATTTTCTGGTGGCCAC	59.109	55.000	28.57	28.57	31.65	5.01
273	274	1.619654	CTGATTTTCTGGTGGCCACA	58.380	50.000	35.78	20.93	0.00	4.17
274	275	1.962807	CTGATTTTCTGGTGGCCACAA	59.037	47.619	35.78	26.00	0.00	3.33
275	276	1.962807	TGATTTTCTGGTGGCCACAAG	59.037	47.619	35.78	33.73	33.61	3.16
276	277	1.963515	GATTTTCTGGTGGCCACAAGT	59.036	47.619	34.56	19.30	34.02	3.16
277	278	2.738587	TTTTCTGGTGGCCACAAGTA	57.261	45.000	34.56	25.65	34.02	2.24
278	279	2.270352	TTTCTGGTGGCCACAAGTAG	57.730	50.000	34.56	25.30	34.02	2.57
279	280	0.400213	TTCTGGTGGCCACAAGTAGG	59.600	55.000	34.56	14.95	34.02	3.18
280	281	0.472925	TCTGGTGGCCACAAGTAGGA	60.473	55.000	34.56	17.04	34.02	2.94
281	282	0.400213	CTGGTGGCCACAAGTAGGAA	59.600	55.000	35.78	10.32	0.00	3.36
282	283	0.400213	TGGTGGCCACAAGTAGGAAG	59.600	55.000	35.78	0.00	0.00	3.46
283	284	0.400594	GGTGGCCACAAGTAGGAAGT	59.599	55.000	35.78	0.00	0.00	3.01
284	285	1.202891	GGTGGCCACAAGTAGGAAGTT	60.203	52.381	35.78	0.00	0.00	2.66
285	286	2.152016	GTGGCCACAAGTAGGAAGTTC	58.848	52.381	31.23	0.00	0.00	3.01
286	287	1.771854	TGGCCACAAGTAGGAAGTTCA	59.228	47.619	0.00	0.00	0.00	3.18
287	288	2.375174	TGGCCACAAGTAGGAAGTTCAT	59.625	45.455	0.00	0.00	0.00	2.57
288	289	2.749621	GGCCACAAGTAGGAAGTTCATG	59.250	50.000	5.01	0.00	0.00	3.07
289	290	3.412386	GCCACAAGTAGGAAGTTCATGT	58.588	45.455	5.01	0.00	0.00	3.21
290	291	3.189287	GCCACAAGTAGGAAGTTCATGTG	59.811	47.826	5.01	10.55	37.14	3.21
291	292	4.641396	CCACAAGTAGGAAGTTCATGTGA	58.359	43.478	18.44	0.00	39.10	3.58
292	293	4.692625	CCACAAGTAGGAAGTTCATGTGAG	59.307	45.833	18.44	7.09	39.10	3.51
293	294	5.511373	CCACAAGTAGGAAGTTCATGTGAGA	60.511	44.000	18.44	0.00	39.10	3.27
294	295	5.991606	CACAAGTAGGAAGTTCATGTGAGAA	59.008	40.000	5.01	0.00	39.10	2.87
295	296	5.992217	ACAAGTAGGAAGTTCATGTGAGAAC	59.008	40.000	5.01	0.00	46.35	3.01
313	314	9.725019	TGTGAGAACAATAGATAATGAACTTGT	57.275	29.630	0.00	0.00	0.00	3.16
314	315	9.979270	GTGAGAACAATAGATAATGAACTTGTG	57.021	33.333	0.00	0.00	0.00	3.33
315	316	9.942850	TGAGAACAATAGATAATGAACTTGTGA	57.057	29.630	0.00	0.00	0.00	3.58
320	321	9.685276	ACAATAGATAATGAACTTGTGATTGGA	57.315	29.630	0.00	0.00	0.00	3.53
323	324	7.578310	AGATAATGAACTTGTGATTGGATGG	57.422	36.000	0.00	0.00	0.00	3.51
324	325	7.121382	AGATAATGAACTTGTGATTGGATGGT	58.879	34.615	0.00	0.00	0.00	3.55
325	326	7.616935	AGATAATGAACTTGTGATTGGATGGTT	59.383	33.333	0.00	0.00	0.00	3.67
326	327	8.821686	ATAATGAACTTGTGATTGGATGGTTA	57.178	30.769	0.00	0.00	0.00	2.85
327	328	5.957842	TGAACTTGTGATTGGATGGTTAC	57.042	39.130	0.00	0.00	0.00	2.50
328	329	5.380900	TGAACTTGTGATTGGATGGTTACA	58.619	37.500	0.00	0.00	0.00	2.41
329	330	5.830457	TGAACTTGTGATTGGATGGTTACAA	59.170	36.000	0.00	0.00	0.00	2.41
330	331	6.322456	TGAACTTGTGATTGGATGGTTACAAA	59.678	34.615	0.00	0.00	0.00	2.83
331	332	6.723298	ACTTGTGATTGGATGGTTACAAAA	57.277	33.333	0.00	0.00	0.00	2.44
332	333	7.118496	ACTTGTGATTGGATGGTTACAAAAA	57.882	32.000	0.00	0.00	0.00	1.94
333	334	7.209475	ACTTGTGATTGGATGGTTACAAAAAG	58.791	34.615	0.00	0.00	0.00	2.27
334	335	6.723298	TGTGATTGGATGGTTACAAAAAGT	57.277	33.333	0.00	0.00	0.00	2.66
335	336	6.511416	TGTGATTGGATGGTTACAAAAAGTG	58.489	36.000	0.00	0.00	0.00	3.16
336	337	5.925969	GTGATTGGATGGTTACAAAAAGTGG	59.074	40.000	0.00	0.00	0.00	4.00
337	338	5.600484	TGATTGGATGGTTACAAAAAGTGGT	59.400	36.000	0.00	0.00	0.00	4.16
338	339	5.941555	TTGGATGGTTACAAAAAGTGGTT	57.058	34.783	0.00	0.00	0.00	3.67
339	340	5.269505	TGGATGGTTACAAAAAGTGGTTG	57.730	39.130	0.00	0.00	0.00	3.77
340	341	4.712337	TGGATGGTTACAAAAAGTGGTTGT	59.288	37.500	0.00	0.00	41.89	3.32
341	342	5.892119	TGGATGGTTACAAAAAGTGGTTGTA	59.108	36.000	0.00	0.00	39.80	2.41
342	343	6.183360	TGGATGGTTACAAAAAGTGGTTGTAC	60.183	38.462	0.00	0.00	40.30	2.90
343	344	5.579564	TGGTTACAAAAAGTGGTTGTACC	57.420	39.130	0.00	3.73	40.30	3.34
344	345	5.262804	TGGTTACAAAAAGTGGTTGTACCT	58.737	37.500	12.70	0.00	40.30	3.08
345	346	5.715753	TGGTTACAAAAAGTGGTTGTACCTT	59.284	36.000	12.70	0.00	40.30	3.50
346	347	6.127675	TGGTTACAAAAAGTGGTTGTACCTTC	60.128	38.462	12.70	0.00	40.30	3.46
347	348	6.127675	GGTTACAAAAAGTGGTTGTACCTTCA	60.128	38.462	0.00	0.00	40.30	3.02
348	349	5.986501	ACAAAAAGTGGTTGTACCTTCAA	57.013	34.783	0.00	0.00	39.58	2.69
349	350	5.716094	ACAAAAAGTGGTTGTACCTTCAAC	58.284	37.500	0.00	0.00	44.57	3.18
360	361	6.839033	GTTGTACCTTCAACCTATTAAGCAC	58.161	40.000	0.00	0.00	40.97	4.40
361	362	5.493809	TGTACCTTCAACCTATTAAGCACC	58.506	41.667	0.00	0.00	0.00	5.01
362	363	4.650972	ACCTTCAACCTATTAAGCACCA	57.349	40.909	0.00	0.00	0.00	4.17
363	364	4.993028	ACCTTCAACCTATTAAGCACCAA	58.007	39.130	0.00	0.00	0.00	3.67
364	365	5.390387	ACCTTCAACCTATTAAGCACCAAA	58.610	37.500	0.00	0.00	0.00	3.28
365	366	6.016555	ACCTTCAACCTATTAAGCACCAAAT	58.983	36.000	0.00	0.00	0.00	2.32
366	367	6.152831	ACCTTCAACCTATTAAGCACCAAATC	59.847	38.462	0.00	0.00	0.00	2.17
367	368	6.405842	CCTTCAACCTATTAAGCACCAAATCC	60.406	42.308	0.00	0.00	0.00	3.01
368	369	4.953579	TCAACCTATTAAGCACCAAATCCC	59.046	41.667	0.00	0.00	0.00	3.85
369	370	3.910989	ACCTATTAAGCACCAAATCCCC	58.089	45.455	0.00	0.00	0.00	4.81
370	371	2.884639	CCTATTAAGCACCAAATCCCCG	59.115	50.000	0.00	0.00	0.00	5.73
371	372	2.525105	ATTAAGCACCAAATCCCCGT	57.475	45.000	0.00	0.00	0.00	5.28
372	373	2.296073	TTAAGCACCAAATCCCCGTT	57.704	45.000	0.00	0.00	0.00	4.44
373	374	2.296073	TAAGCACCAAATCCCCGTTT	57.704	45.000	0.00	0.00	0.00	3.60
374	375	1.419381	AAGCACCAAATCCCCGTTTT	58.581	45.000	0.00	0.00	0.00	2.43
375	376	0.678950	AGCACCAAATCCCCGTTTTG	59.321	50.000	0.00	0.00	34.55	2.44
380	381	1.546923	CCAAATCCCCGTTTTGGTACC	59.453	52.381	4.43	4.43	45.25	3.34
381	382	1.546923	CAAATCCCCGTTTTGGTACCC	59.453	52.381	10.07	0.00	35.15	3.69
382	383	0.778720	AATCCCCGTTTTGGTACCCA	59.221	50.000	10.07	0.00	35.15	4.51
383	384	1.004436	ATCCCCGTTTTGGTACCCAT	58.996	50.000	10.07	0.00	35.15	4.00
384	385	0.328926	TCCCCGTTTTGGTACCCATC	59.671	55.000	10.07	0.00	35.15	3.51
385	386	0.330267	CCCCGTTTTGGTACCCATCT	59.670	55.000	10.07	0.00	35.15	2.90
386	387	1.272258	CCCCGTTTTGGTACCCATCTT	60.272	52.381	10.07	0.00	35.15	2.40
387	388	2.026075	CCCCGTTTTGGTACCCATCTTA	60.026	50.000	10.07	0.00	35.15	2.10
388	389	3.372241	CCCCGTTTTGGTACCCATCTTAT	60.372	47.826	10.07	0.00	35.15	1.73
389	390	3.881089	CCCGTTTTGGTACCCATCTTATC	59.119	47.826	10.07	0.00	35.15	1.75
390	391	4.384868	CCCGTTTTGGTACCCATCTTATCT	60.385	45.833	10.07	0.00	35.15	1.98
391	392	4.814771	CCGTTTTGGTACCCATCTTATCTC	59.185	45.833	10.07	0.00	31.53	2.75
392	393	4.506654	CGTTTTGGTACCCATCTTATCTCG	59.493	45.833	10.07	0.00	31.53	4.04
393	394	5.425630	GTTTTGGTACCCATCTTATCTCGT	58.574	41.667	10.07	0.00	31.53	4.18
394	395	4.665833	TTGGTACCCATCTTATCTCGTG	57.334	45.455	10.07	0.00	31.53	4.35
395	396	3.905968	TGGTACCCATCTTATCTCGTGA	58.094	45.455	10.07	0.00	0.00	4.35
396	397	4.480115	TGGTACCCATCTTATCTCGTGAT	58.520	43.478	10.07	5.20	36.74	3.06
397	398	4.280929	TGGTACCCATCTTATCTCGTGATG	59.719	45.833	10.07	0.00	37.79	3.07
402	403	5.221342	ACCCATCTTATCTCGTGATGAAGTC	60.221	44.000	10.16	0.00	39.72	3.01
420	421	3.444029	AGTCCAATAGCTGCCCAAAAAT	58.556	40.909	0.00	0.00	0.00	1.82
421	422	3.448660	AGTCCAATAGCTGCCCAAAAATC	59.551	43.478	0.00	0.00	0.00	2.17
422	423	2.426738	TCCAATAGCTGCCCAAAAATCG	59.573	45.455	0.00	0.00	0.00	3.34
425	426	1.459450	TAGCTGCCCAAAAATCGTCC	58.541	50.000	0.00	0.00	0.00	4.79
454	455	0.113190	AACAGGAGGGAAAGGCTTGG	59.887	55.000	0.00	0.00	0.00	3.61
471	473	3.243002	GCTTGGCTGAGCTAATTCACATC	60.243	47.826	3.06	0.00	39.57	3.06
479	481	4.097892	TGAGCTAATTCACATCGCAGACTA	59.902	41.667	0.00	0.00	42.51	2.59
519	525	1.340248	CCAGCCAAATGATCATGCCTC	59.660	52.381	9.46	0.00	0.00	4.70
623	643	1.700955	GGCCAATCTTCCTGCATCAT	58.299	50.000	0.00	0.00	0.00	2.45
649	669	3.896133	GCATGGCGGCATGTGGAG	61.896	66.667	41.00	23.77	35.16	3.86
650	670	2.438975	CATGGCGGCATGTGGAGT	60.439	61.111	36.25	8.52	0.00	3.85
651	671	2.048023	CATGGCGGCATGTGGAGTT	61.048	57.895	36.25	7.73	0.00	3.01
732	766	0.744874	GGTAGGTGACGCTGATGCTA	59.255	55.000	0.00	0.00	36.97	3.49
733	767	1.536284	GGTAGGTGACGCTGATGCTAC	60.536	57.143	0.00	0.00	36.97	3.58
734	768	1.134367	GTAGGTGACGCTGATGCTACA	59.866	52.381	0.00	0.00	36.97	2.74
735	769	0.826715	AGGTGACGCTGATGCTACAT	59.173	50.000	0.00	0.00	36.97	2.29
736	770	1.202463	AGGTGACGCTGATGCTACATC	60.202	52.381	0.55	0.55	36.97	3.06
738	772	2.477825	GTGACGCTGATGCTACATCAT	58.522	47.619	10.48	0.00	36.97	2.45
739	773	3.552890	GGTGACGCTGATGCTACATCATA	60.553	47.826	10.48	0.00	36.97	2.15
740	774	3.672397	GTGACGCTGATGCTACATCATAG	59.328	47.826	10.48	9.88	36.97	2.23
741	775	3.569701	TGACGCTGATGCTACATCATAGA	59.430	43.478	10.48	0.00	36.97	1.98
742	776	4.219288	TGACGCTGATGCTACATCATAGAT	59.781	41.667	10.48	0.00	36.97	1.98
743	777	5.144692	ACGCTGATGCTACATCATAGATT	57.855	39.130	10.48	0.00	36.97	2.40
744	778	6.071952	TGACGCTGATGCTACATCATAGATTA	60.072	38.462	10.48	0.00	36.97	1.75
817	859	6.170846	AGATGTGATTGAGCATCTACATCA	57.829	37.500	18.82	8.53	46.82	3.07
830	872	8.913487	AGCATCTACATCAATCATCACATTAA	57.087	30.769	0.00	0.00	0.00	1.40
894	960	7.448777	TGGAGGTTGTGCATTTAACTTGTTATA	59.551	33.333	10.09	0.00	0.00	0.98
896	962	9.341899	GAGGTTGTGCATTTAACTTGTTATAAG	57.658	33.333	10.09	0.00	0.00	1.73
953	1027	2.496070	AGAGGTTACATAGTGCGCAAGA	59.504	45.455	14.00	2.43	43.02	3.02
1125	1230	1.437573	CCTCTTGCTCATCGCGGTA	59.562	57.895	6.13	0.00	43.27	4.02
1150	1255	1.599047	CTTGTCTCCGGCCATGTCT	59.401	57.895	2.24	0.00	0.00	3.41
1190	1302	6.245408	ACTGCAAACACCAAATCTATCCTTA	58.755	36.000	0.00	0.00	0.00	2.69
1213	1336	8.825667	TTACATCATGTATACATATGCACGTT	57.174	30.769	17.86	8.51	32.20	3.99
1221	1344	3.895232	ACATATGCACGTTCTTCCTCT	57.105	42.857	1.58	0.00	0.00	3.69
1232	1355	7.012515	TGCACGTTCTTCCTCTGTTTATTTTTA	59.987	33.333	0.00	0.00	0.00	1.52
1233	1356	7.322938	GCACGTTCTTCCTCTGTTTATTTTTAC	59.677	37.037	0.00	0.00	0.00	2.01
1279	1422	9.658799	TGAGTCCAATTTTGTAAAATTTTGTCA	57.341	25.926	13.76	9.59	43.91	3.58
1393	1543	9.342308	TGATTTGATGAGGTGAATTCTATTACC	57.658	33.333	7.05	5.81	0.00	2.85
1416	1566	5.594317	CCCTTTTCTATGAACCGGATCAAAT	59.406	40.000	19.12	5.77	32.06	2.32
1490	1649	3.084039	TGGAGAGATTGTTCCATGCAAC	58.916	45.455	0.00	0.00	38.53	4.17
1619	1782	3.244353	CCCACCTAATCATCGAAGCATCT	60.244	47.826	0.00	0.00	0.00	2.90
1816	1983	2.336891	AGCTGACTCCAGATATGCCAT	58.663	47.619	0.00	0.00	43.02	4.40
1960	2130	2.817258	TGTCTATTCCCGGCAAAACAAG	59.183	45.455	0.00	0.00	0.00	3.16
1963	2133	4.157840	GTCTATTCCCGGCAAAACAAGAAT	59.842	41.667	0.00	0.00	0.00	2.40
1964	2134	5.355910	GTCTATTCCCGGCAAAACAAGAATA	59.644	40.000	0.00	0.53	0.00	1.75
1965	2135	5.946972	TCTATTCCCGGCAAAACAAGAATAA	59.053	36.000	0.00	0.00	0.00	1.40
1966	2136	4.513198	TTCCCGGCAAAACAAGAATAAG	57.487	40.909	0.00	0.00	0.00	1.73
1967	2137	3.492337	TCCCGGCAAAACAAGAATAAGT	58.508	40.909	0.00	0.00	0.00	2.24
1968	2138	3.504520	TCCCGGCAAAACAAGAATAAGTC	59.495	43.478	0.00	0.00	0.00	3.01
1969	2139	3.488489	CCGGCAAAACAAGAATAAGTCG	58.512	45.455	0.00	0.00	0.00	4.18
1970	2140	3.488489	CGGCAAAACAAGAATAAGTCGG	58.512	45.455	0.00	0.00	0.00	4.79
1971	2141	3.187637	CGGCAAAACAAGAATAAGTCGGA	59.812	43.478	0.00	0.00	0.00	4.55
1972	2142	4.142687	CGGCAAAACAAGAATAAGTCGGAT	60.143	41.667	0.00	0.00	0.00	4.18
1973	2143	5.332707	GGCAAAACAAGAATAAGTCGGATC	58.667	41.667	0.00	0.00	0.00	3.36
1974	2144	5.106317	GGCAAAACAAGAATAAGTCGGATCA	60.106	40.000	0.00	0.00	0.00	2.92
1975	2145	5.795441	GCAAAACAAGAATAAGTCGGATCAC	59.205	40.000	0.00	0.00	0.00	3.06
1976	2146	6.314784	CAAAACAAGAATAAGTCGGATCACC	58.685	40.000	0.00	0.00	0.00	4.02
1977	2147	4.819105	ACAAGAATAAGTCGGATCACCA	57.181	40.909	0.00	0.00	35.59	4.17
1978	2148	4.759782	ACAAGAATAAGTCGGATCACCAG	58.240	43.478	0.00	0.00	35.59	4.00
1979	2149	4.466370	ACAAGAATAAGTCGGATCACCAGA	59.534	41.667	0.00	0.00	35.59	3.86
1980	2150	5.046591	ACAAGAATAAGTCGGATCACCAGAA	60.047	40.000	0.00	0.00	35.59	3.02
1981	2151	5.878406	AGAATAAGTCGGATCACCAGAAT	57.122	39.130	0.00	0.00	35.59	2.40
1982	2152	6.240549	AGAATAAGTCGGATCACCAGAATT	57.759	37.500	0.00	0.00	34.04	2.17
1983	2153	6.653989	AGAATAAGTCGGATCACCAGAATTT	58.346	36.000	0.00	0.00	32.76	1.82
1984	2154	6.763610	AGAATAAGTCGGATCACCAGAATTTC	59.236	38.462	0.00	0.00	32.76	2.17
1985	2155	4.559862	AAGTCGGATCACCAGAATTTCT	57.440	40.909	0.00	0.00	35.59	2.52
1986	2156	4.130286	AGTCGGATCACCAGAATTTCTC	57.870	45.455	0.00	0.00	35.59	2.87
1987	2157	3.515502	AGTCGGATCACCAGAATTTCTCA	59.484	43.478	0.00	0.00	35.59	3.27
1988	2158	3.868077	GTCGGATCACCAGAATTTCTCAG	59.132	47.826	0.00	0.00	35.59	3.35
1989	2159	3.769300	TCGGATCACCAGAATTTCTCAGA	59.231	43.478	0.00	0.00	35.59	3.27
1990	2160	3.868077	CGGATCACCAGAATTTCTCAGAC	59.132	47.826	0.00	0.00	35.59	3.51
1991	2161	4.382470	CGGATCACCAGAATTTCTCAGACT	60.382	45.833	0.00	0.00	35.59	3.24
1992	2162	5.163509	CGGATCACCAGAATTTCTCAGACTA	60.164	44.000	0.00	0.00	35.59	2.59
1993	2163	6.045955	GGATCACCAGAATTTCTCAGACTAC	58.954	44.000	0.00	0.00	35.97	2.73
1994	2164	6.351371	GGATCACCAGAATTTCTCAGACTACA	60.351	42.308	0.00	0.00	35.97	2.74
1995	2165	5.784177	TCACCAGAATTTCTCAGACTACAC	58.216	41.667	0.00	0.00	0.00	2.90
1996	2166	5.540337	TCACCAGAATTTCTCAGACTACACT	59.460	40.000	0.00	0.00	0.00	3.55
1997	2167	6.719829	TCACCAGAATTTCTCAGACTACACTA	59.280	38.462	0.00	0.00	0.00	2.74
1998	2168	7.232737	TCACCAGAATTTCTCAGACTACACTAA	59.767	37.037	0.00	0.00	0.00	2.24
1999	2169	7.543868	CACCAGAATTTCTCAGACTACACTAAG	59.456	40.741	0.00	0.00	0.00	2.18
2022	2192	8.699283	AAGAGATTAAATTTTGCTTGATCTGC	57.301	30.769	0.00	0.00	0.00	4.26
2037	2209	6.398234	TTGATCTGCTAGTTTCTAGCTAGG	57.602	41.667	20.58	15.48	40.95	3.02
2094	2274	6.209361	CAGTTTTGTTTCTAAGGCTTCCTTC	58.791	40.000	1.30	0.00	43.57	3.46
2109	2290	6.948886	AGGCTTCCTTCGATTCATAGTATAGA	59.051	38.462	0.00	0.00	0.00	1.98
2111	2292	8.254508	GGCTTCCTTCGATTCATAGTATAGAAT	58.745	37.037	7.24	7.24	37.19	2.40
2238	2458	7.067496	ACGAAGGATTGGTTCTATCATGTAT	57.933	36.000	0.00	0.00	30.97	2.29
2274	2494	2.897271	TCCTGCAAATCAAAGGGCTA	57.103	45.000	0.00	0.00	0.00	3.93
2369	2624	1.955778	TCACATGGTTCTTGGTTGCAG	59.044	47.619	0.00	0.00	0.00	4.41
2561	2822	1.520600	GCCATTTGTCCCGGTTCGTT	61.521	55.000	0.00	0.00	0.00	3.85
2609	2870	1.346722	CGAACCAGGACTAAAGGGTGT	59.653	52.381	0.00	0.00	33.00	4.16
2642	2903	1.603455	CCGGTTCATGGCACCAACT	60.603	57.895	13.57	0.00	33.36	3.16
2643	2904	0.322098	CCGGTTCATGGCACCAACTA	60.322	55.000	13.57	0.00	33.36	2.24
2653	2915	5.482526	TCATGGCACCAACTAGTACTAAAGA	59.517	40.000	3.76	0.00	0.00	2.52
2710	2972	4.141344	GGTACTAATGGGGTTTGAGGCATA	60.141	45.833	0.00	0.00	0.00	3.14
2911	3194	6.853279	ATGTGAATTTCGACTTTATTTGCG	57.147	33.333	0.00	0.00	0.00	4.85
3226	3675	4.998672	CCGGTCAAACTATGGTCAAACTAA	59.001	41.667	0.00	0.00	0.00	2.24
3839	4589	0.903236	AGCCTTTAGTCTCGGTTCCC	59.097	55.000	0.00	0.00	0.00	3.97
3893	4691	1.005097	GAACCGGGACAAATACCCCTT	59.995	52.381	6.32	0.00	44.09	3.95
3952	4752	2.871133	CGTAGGCGACACTCATTTACA	58.129	47.619	0.00	0.00	41.33	2.41
3982	4782	1.408422	TCGATGCTCATATTGACGCG	58.592	50.000	3.53	3.53	0.00	6.01
3989	4789	5.822584	TGCTCATATTGACGCGTAATTAG	57.177	39.130	13.97	6.00	0.00	1.73
4020	4820	7.251321	ACCATTTTCTTTTATGTATTGCCCA	57.749	32.000	0.00	0.00	0.00	5.36
4023	4823	9.480053	CCATTTTCTTTTATGTATTGCCCATAG	57.520	33.333	0.00	0.00	0.00	2.23
4053	4859	4.806247	GTGTACATCACTGATTGCCTACTC	59.194	45.833	0.00	0.00	43.13	2.59
4075	5152	7.967908	ACTCAACATAATATGGTAAGAGGAGG	58.032	38.462	9.52	0.00	33.60	4.30
4103	5180	8.862325	TTCTCTTTGCCATAGTTTTCTTATCA	57.138	30.769	0.00	0.00	0.00	2.15
4111	5188	7.121168	TGCCATAGTTTTCTTATCAACTTCCAG	59.879	37.037	0.00	0.00	34.92	3.86
4123	5200	5.250235	TCAACTTCCAGTCATCTATCGAC	57.750	43.478	0.00	0.00	0.00	4.20
4181	5261	8.865590	TTTGAAGACTAACAGGTTAAAATTGC	57.134	30.769	0.00	0.00	0.00	3.56
4319	5948	5.132502	TCATCAAAGGTTCACTCAACATGT	58.867	37.500	0.00	0.00	36.61	3.21
4356	5985	9.379791	GTTTTCCATTATATTATACTCCCTCCG	57.620	37.037	0.00	0.00	0.00	4.63
4357	5986	8.674925	TTTCCATTATATTATACTCCCTCCGT	57.325	34.615	0.00	0.00	0.00	4.69
4358	5987	7.893124	TCCATTATATTATACTCCCTCCGTC	57.107	40.000	0.00	0.00	0.00	4.79
4359	5988	6.837568	TCCATTATATTATACTCCCTCCGTCC	59.162	42.308	0.00	0.00	0.00	4.79
4360	5989	6.610020	CCATTATATTATACTCCCTCCGTCCA	59.390	42.308	0.00	0.00	0.00	4.02
4361	5990	7.125204	CCATTATATTATACTCCCTCCGTCCAA	59.875	40.741	0.00	0.00	0.00	3.53
4362	5991	8.537016	CATTATATTATACTCCCTCCGTCCAAA	58.463	37.037	0.00	0.00	0.00	3.28
4363	5992	8.495160	TTATATTATACTCCCTCCGTCCAAAA	57.505	34.615	0.00	0.00	0.00	2.44
4364	5993	5.703730	ATTATACTCCCTCCGTCCAAAAA	57.296	39.130	0.00	0.00	0.00	1.94
4385	6014	5.801531	AAAACTTGTCCCAAACTTATCCC	57.198	39.130	0.00	0.00	0.00	3.85
4386	6015	4.741928	AACTTGTCCCAAACTTATCCCT	57.258	40.909	0.00	0.00	0.00	4.20
4387	6016	4.302559	ACTTGTCCCAAACTTATCCCTC	57.697	45.455	0.00	0.00	0.00	4.30
4388	6017	3.655777	ACTTGTCCCAAACTTATCCCTCA	59.344	43.478	0.00	0.00	0.00	3.86
4389	6018	4.105697	ACTTGTCCCAAACTTATCCCTCAA	59.894	41.667	0.00	0.00	0.00	3.02
4390	6019	4.733077	TGTCCCAAACTTATCCCTCAAA	57.267	40.909	0.00	0.00	0.00	2.69
4391	6020	5.269554	TGTCCCAAACTTATCCCTCAAAT	57.730	39.130	0.00	0.00	0.00	2.32
4392	6021	5.016173	TGTCCCAAACTTATCCCTCAAATG	58.984	41.667	0.00	0.00	0.00	2.32
4393	6022	4.402474	GTCCCAAACTTATCCCTCAAATGG	59.598	45.833	0.00	0.00	0.00	3.16
4394	6023	4.293634	TCCCAAACTTATCCCTCAAATGGA	59.706	41.667	0.00	0.00	36.05	3.41
4395	6024	5.043432	TCCCAAACTTATCCCTCAAATGGAT	60.043	40.000	0.00	0.00	44.71	3.41
4396	6025	5.069516	CCCAAACTTATCCCTCAAATGGATG	59.930	44.000	2.10	0.00	42.57	3.51
4397	6026	5.658190	CCAAACTTATCCCTCAAATGGATGT	59.342	40.000	2.10	0.00	42.57	3.06
4398	6027	6.833416	CCAAACTTATCCCTCAAATGGATGTA	59.167	38.462	2.10	0.00	42.57	2.29
4399	6028	7.506938	CCAAACTTATCCCTCAAATGGATGTAT	59.493	37.037	2.10	0.00	42.57	2.29
4400	6029	8.571336	CAAACTTATCCCTCAAATGGATGTATC	58.429	37.037	2.10	0.00	42.57	2.24
4401	6030	7.639062	ACTTATCCCTCAAATGGATGTATCT	57.361	36.000	2.10	0.00	42.57	1.98
4402	6031	8.742125	ACTTATCCCTCAAATGGATGTATCTA	57.258	34.615	2.10	0.00	42.57	1.98
4403	6032	8.820831	ACTTATCCCTCAAATGGATGTATCTAG	58.179	37.037	2.10	0.00	42.57	2.43
4404	6033	5.489792	TCCCTCAAATGGATGTATCTAGC	57.510	43.478	0.00	0.00	0.00	3.42
4405	6034	4.907269	TCCCTCAAATGGATGTATCTAGCA	59.093	41.667	0.00	0.00	0.00	3.49
4406	6035	4.999950	CCCTCAAATGGATGTATCTAGCAC	59.000	45.833	0.00	0.00	0.00	4.40
4407	6036	5.221803	CCCTCAAATGGATGTATCTAGCACT	60.222	44.000	0.00	0.00	0.00	4.40
4408	6037	6.014242	CCCTCAAATGGATGTATCTAGCACTA	60.014	42.308	0.00	0.00	0.00	2.74
4409	6038	7.445121	CCTCAAATGGATGTATCTAGCACTAA	58.555	38.462	0.00	0.00	0.00	2.24
4410	6039	8.099537	CCTCAAATGGATGTATCTAGCACTAAT	58.900	37.037	0.00	0.00	0.00	1.73
4411	6040	9.499479	CTCAAATGGATGTATCTAGCACTAATT	57.501	33.333	0.00	0.00	0.00	1.40
4412	6041	9.851686	TCAAATGGATGTATCTAGCACTAATTT	57.148	29.630	0.00	0.00	0.00	1.82
4413	6042	9.888878	CAAATGGATGTATCTAGCACTAATTTG	57.111	33.333	0.00	0.00	0.00	2.32
4414	6043	9.851686	AAATGGATGTATCTAGCACTAATTTGA	57.148	29.630	0.00	0.00	0.00	2.69
4416	6045	8.837788	TGGATGTATCTAGCACTAATTTGATG	57.162	34.615	0.00	0.00	0.00	3.07
4417	6046	7.388776	TGGATGTATCTAGCACTAATTTGATGC	59.611	37.037	0.00	0.72	39.74	3.91
4429	6058	8.777413	GCACTAATTTGATGCTAGATACATTCA	58.223	33.333	0.00	0.00	36.40	2.57
4436	6065	7.974482	TGATGCTAGATACATTCATTTGAGG	57.026	36.000	0.00	0.00	0.00	3.86
4437	6066	6.938596	TGATGCTAGATACATTCATTTGAGGG	59.061	38.462	0.00	0.00	0.00	4.30
4438	6067	6.499106	TGCTAGATACATTCATTTGAGGGA	57.501	37.500	0.00	0.00	0.00	4.20
4439	6068	6.291377	TGCTAGATACATTCATTTGAGGGAC	58.709	40.000	0.00	0.00	0.00	4.46
4440	6069	6.126796	TGCTAGATACATTCATTTGAGGGACA	60.127	38.462	0.00	0.00	0.00	4.02
4441	6070	6.767902	GCTAGATACATTCATTTGAGGGACAA	59.232	38.462	0.00	0.00	36.65	3.18
4442	6071	7.041508	GCTAGATACATTCATTTGAGGGACAAG	60.042	40.741	0.00	0.00	39.77	3.16
4443	6072	6.725364	AGATACATTCATTTGAGGGACAAGT	58.275	36.000	0.00	0.00	39.77	3.16
4444	6073	7.177878	AGATACATTCATTTGAGGGACAAGTT	58.822	34.615	0.00	0.00	39.77	2.66
4445	6074	7.671398	AGATACATTCATTTGAGGGACAAGTTT	59.329	33.333	0.00	0.00	39.77	2.66
4446	6075	6.484364	ACATTCATTTGAGGGACAAGTTTT	57.516	33.333	0.00	0.00	39.77	2.43
4447	6076	6.888105	ACATTCATTTGAGGGACAAGTTTTT	58.112	32.000	0.00	0.00	39.77	1.94
4585	6217	7.117236	GCATGTTTCATATAATCAAATGGCTGG	59.883	37.037	0.00	0.00	0.00	4.85
4607	6239	7.325338	GCTGGAATACATTTCAATCGATTCATG	59.675	37.037	7.92	12.77	0.00	3.07
4608	6240	7.140705	TGGAATACATTTCAATCGATTCATGC	58.859	34.615	7.92	0.00	0.00	4.06
4609	6241	7.140705	GGAATACATTTCAATCGATTCATGCA	58.859	34.615	7.92	2.61	0.00	3.96
4614	6250	4.642445	TTCAATCGATTCATGCAGCAAT	57.358	36.364	7.92	0.00	0.00	3.56
4693	6337	8.833231	TCCACTGTGCTTTATAGATTTATAGC	57.167	34.615	1.29	0.00	0.00	2.97
4695	6339	9.224267	CCACTGTGCTTTATAGATTTATAGCAT	57.776	33.333	1.29	0.00	34.84	3.79
4819	6893	6.607600	TCCTACAGCTACATTCTACAGTTCAT	59.392	38.462	0.00	0.00	0.00	2.57
5007	7081	4.637534	TGATAAGCCAAGCATTTCAGTCTC	59.362	41.667	0.00	0.00	0.00	3.36
5021	7095	2.234661	TCAGTCTCGCAAGGTGAATCAT	59.765	45.455	0.00	0.00	38.47	2.45
5068	7144	2.407090	GCACAAGAATTCTTTGGGCAC	58.593	47.619	26.38	10.48	35.21	5.01
5083	7159	1.741401	GCACTATGACACCTGCGCA	60.741	57.895	10.98	10.98	0.00	6.09
5155	7231	6.016777	GTGTTCCATGATACAATGATTCCTCC	60.017	42.308	0.00	0.00	0.00	4.30
5172	7248	3.067461	TCCTCCGTTTCAAACACAATTGG	59.933	43.478	10.83	1.35	0.00	3.16
5245	7651	5.576447	AGGACCCGTTGCTTTATTAAATG	57.424	39.130	0.00	0.00	0.00	2.32
5318	7724	7.607615	AAACTACAAACTAGACCCTGACTTA	57.392	36.000	0.00	0.00	0.00	2.24
5348	7754	2.107204	GGACCCTGAATAGTGGATGCAT	59.893	50.000	0.00	0.00	0.00	3.96
5351	7757	3.716353	ACCCTGAATAGTGGATGCATACA	59.284	43.478	7.78	7.78	0.00	2.29
5352	7758	4.165950	ACCCTGAATAGTGGATGCATACAA	59.834	41.667	14.73	0.00	0.00	2.41
5371	7777	3.181434	ACAACAATTAGGTCCCTGCAAGA	60.181	43.478	0.00	0.00	34.07	3.02
5379	7785	0.744771	GTCCCTGCAAGATCCCGAAC	60.745	60.000	0.00	0.00	34.07	3.95
5402	7808	2.936919	AGCAATCTCACAACCACTGA	57.063	45.000	0.00	0.00	0.00	3.41
5440	7846	8.297426	CACACTACTACAGAAACATCTTGTAGA	58.703	37.037	15.46	0.00	36.78	2.59
5475	7881	2.490903	GTGACAGTTAGGGCGACTCTTA	59.509	50.000	0.00	0.00	0.00	2.10
5513	7919	0.899717	GCTCATGGGCAAAGGGACAA	60.900	55.000	14.19	0.00	0.00	3.18
5533	7939	2.157834	ACGTGAATGGTAAGAACGCA	57.842	45.000	0.00	0.00	37.76	5.24
5604	8011	3.503363	GCCAAATCTGTGTTGAGACATGA	59.497	43.478	0.00	0.00	38.23	3.07
5605	8012	4.379186	GCCAAATCTGTGTTGAGACATGAG	60.379	45.833	0.00	0.00	38.23	2.90
5613	8020	1.899437	TTGAGACATGAGCGTCCCCC	61.899	60.000	0.00	0.00	36.52	5.40
5617	8024	2.187946	CATGAGCGTCCCCCTGAC	59.812	66.667	0.00	0.00	40.81	3.51
5625	8032	1.600916	GTCCCCCTGACAACTGTGC	60.601	63.158	0.00	0.00	43.85	4.57
5626	8033	2.282462	CCCCCTGACAACTGTGCC	60.282	66.667	0.00	0.00	0.00	5.01
5627	8034	2.669569	CCCCTGACAACTGTGCCG	60.670	66.667	0.00	0.00	0.00	5.69
5647	8054	2.197465	GGTGGTCTTAGGTGGGAAGAT	58.803	52.381	0.00	0.00	35.46	2.40
5694	8101	1.207089	CCTGGCATGGAGTAAAGACGA	59.793	52.381	0.00	0.00	0.00	4.20
5698	8105	1.666189	GCATGGAGTAAAGACGAAGGC	59.334	52.381	0.00	0.00	0.00	4.35
5701	8108	0.529378	GGAGTAAAGACGAAGGCGGA	59.471	55.000	0.00	0.00	43.17	5.54
5715	8122	1.138859	AGGCGGATGTCGAATGATTCA	59.861	47.619	5.95	0.00	42.43	2.57
5751	8158	7.770801	TGATTGACGACCACTTTATATCTTG	57.229	36.000	0.00	0.00	0.00	3.02
5753	8160	4.439057	TGACGACCACTTTATATCTTGGC	58.561	43.478	0.00	0.00	31.76	4.52
5769	8177	1.231221	TGGCAGTACGAAATTGCGTT	58.769	45.000	18.36	0.00	42.71	4.84
5807	8215	4.497006	GGCATCATCTACTTGTCATTGCAC	60.497	45.833	0.00	0.00	0.00	4.57
5823	8231	2.486918	TGCACTGATATTCGATGGCTG	58.513	47.619	0.00	0.00	0.00	4.85
5846	8266	7.658525	TGGCATTGAAAATCCTTATACATGT	57.341	32.000	2.69	2.69	0.00	3.21
5847	8267	8.076910	TGGCATTGAAAATCCTTATACATGTT	57.923	30.769	2.30	0.00	0.00	2.71
5859	8279	7.552459	TCCTTATACATGTTGTCTTCGATCAA	58.448	34.615	2.30	0.00	0.00	2.57
5869	8289	0.729116	CTTCGATCAAGCGTGGCAAT	59.271	50.000	0.00	0.00	0.00	3.56
5882	8302	1.451927	GGCAATGATGGCGTGAGGA	60.452	57.895	0.00	0.00	42.73	3.71
5883	8303	1.718757	GGCAATGATGGCGTGAGGAC	61.719	60.000	0.00	0.00	42.73	3.85
5919	8339	2.335316	AGGTGTTGTTGCGGAAGTAA	57.665	45.000	0.00	0.00	0.00	2.24
5941	8362	8.377799	AGTAATACTCTTTTTACGGGGAAGAAA	58.622	33.333	0.00	0.00	34.30	2.52
5972	8393	9.823647	ACTTTAATTAGTCACTAGACCATGATG	57.176	33.333	0.00	0.00	46.15	3.07
5973	8394	9.265901	CTTTAATTAGTCACTAGACCATGATGG	57.734	37.037	10.53	10.53	46.15	3.51
5974	8395	4.672587	TTAGTCACTAGACCATGATGGC	57.327	45.455	12.25	4.53	46.15	4.40
5975	8396	1.410517	AGTCACTAGACCATGATGGCG	59.589	52.381	12.25	0.18	46.15	5.69
5976	8397	0.104855	TCACTAGACCATGATGGCGC	59.895	55.000	12.25	0.00	42.67	6.53
5977	8398	1.068083	ACTAGACCATGATGGCGCG	59.932	57.895	12.25	0.00	42.67	6.86
5978	8399	2.280119	TAGACCATGATGGCGCGC	60.280	61.111	25.94	25.94	42.67	6.86
5982	8403	4.892379	CCATGATGGCGCGCGTTG	62.892	66.667	32.35	16.50	0.00	4.10
5995	8416	4.764336	CGTTGCCGCGTCCGTCTA	62.764	66.667	4.92	0.00	0.00	2.59
5996	8417	2.202703	GTTGCCGCGTCCGTCTAT	60.203	61.111	4.92	0.00	0.00	1.98
5997	8418	1.808390	GTTGCCGCGTCCGTCTATT	60.808	57.895	4.92	0.00	0.00	1.73
5998	8419	1.079681	TTGCCGCGTCCGTCTATTT	60.080	52.632	4.92	0.00	0.00	1.40
5999	8420	0.671163	TTGCCGCGTCCGTCTATTTT	60.671	50.000	4.92	0.00	0.00	1.82
6000	8421	1.347221	GCCGCGTCCGTCTATTTTG	59.653	57.895	4.92	0.00	0.00	2.44
6001	8422	1.347221	CCGCGTCCGTCTATTTTGC	59.653	57.895	4.92	0.00	0.00	3.68
6002	8423	1.355796	CCGCGTCCGTCTATTTTGCA	61.356	55.000	4.92	0.00	0.00	4.08
6003	8424	0.247145	CGCGTCCGTCTATTTTGCAC	60.247	55.000	0.00	0.00	0.00	4.57
6004	8425	0.793861	GCGTCCGTCTATTTTGCACA	59.206	50.000	0.00	0.00	0.00	4.57
6005	8426	1.396996	GCGTCCGTCTATTTTGCACAT	59.603	47.619	0.00	0.00	0.00	3.21
6006	8427	2.605818	GCGTCCGTCTATTTTGCACATA	59.394	45.455	0.00	0.00	0.00	2.29
6007	8428	3.247648	GCGTCCGTCTATTTTGCACATAT	59.752	43.478	0.00	0.00	0.00	1.78
6008	8429	4.446385	GCGTCCGTCTATTTTGCACATATA	59.554	41.667	0.00	0.00	0.00	0.86
6009	8430	5.050634	GCGTCCGTCTATTTTGCACATATAA	60.051	40.000	0.00	0.00	0.00	0.98
6010	8431	6.347402	GCGTCCGTCTATTTTGCACATATAAT	60.347	38.462	0.00	0.00	0.00	1.28
6011	8432	7.148705	GCGTCCGTCTATTTTGCACATATAATA	60.149	37.037	0.00	0.00	0.00	0.98
6012	8433	8.705134	CGTCCGTCTATTTTGCACATATAATAA	58.295	33.333	0.00	0.00	0.00	1.40
6014	8435	9.214957	TCCGTCTATTTTGCACATATAATAAGG	57.785	33.333	0.00	0.00	0.00	2.69
6015	8436	8.999431	CCGTCTATTTTGCACATATAATAAGGT	58.001	33.333	0.00	0.00	0.00	3.50
6024	8445	9.800433	TTGCACATATAATAAGGTTTGTGAATG	57.200	29.630	5.14	0.00	37.28	2.67
6025	8446	8.965819	TGCACATATAATAAGGTTTGTGAATGT	58.034	29.630	5.14	0.00	37.28	2.71
6026	8447	9.236691	GCACATATAATAAGGTTTGTGAATGTG	57.763	33.333	5.14	0.00	41.95	3.21
6027	8448	9.236691	CACATATAATAAGGTTTGTGAATGTGC	57.763	33.333	0.00	0.00	37.28	4.57

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	0.177141	TTAAAGGACGCGGCAGCTAT	59.823	50.000	17.00	0.00	42.32	2.97
2	3	0.676782	ATTTAAAGGACGCGGCAGCT	60.677	50.000	17.00	0.00	42.32	4.24
3	4	0.523335	CATTTAAAGGACGCGGCAGC	60.523	55.000	17.00	0.00	40.74	5.25
4	5	0.523335	GCATTTAAAGGACGCGGCAG	60.523	55.000	17.00	0.00	0.00	4.85
5	6	1.237954	TGCATTTAAAGGACGCGGCA	61.238	50.000	17.00	4.49	0.00	5.69
6	7	0.100503	ATGCATTTAAAGGACGCGGC	59.899	50.000	12.47	7.53	0.00	6.53
7	8	3.249799	TCATATGCATTTAAAGGACGCGG	59.750	43.478	12.47	0.00	0.00	6.46
8	9	4.466567	TCATATGCATTTAAAGGACGCG	57.533	40.909	3.54	3.53	0.00	6.01
9	10	5.682862	CACTTCATATGCATTTAAAGGACGC	59.317	40.000	3.54	0.00	0.00	5.19
10	11	7.015226	TCACTTCATATGCATTTAAAGGACG	57.985	36.000	3.54	0.00	0.00	4.79
11	12	6.914757	GCTCACTTCATATGCATTTAAAGGAC	59.085	38.462	3.54	0.00	0.00	3.85
12	13	6.830324	AGCTCACTTCATATGCATTTAAAGGA	59.170	34.615	3.54	5.39	0.00	3.36
13	14	7.035840	AGCTCACTTCATATGCATTTAAAGG	57.964	36.000	3.54	0.00	0.00	3.11
14	15	7.137426	GGAGCTCACTTCATATGCATTTAAAG	58.863	38.462	17.19	8.67	0.00	1.85
15	16	6.602803	TGGAGCTCACTTCATATGCATTTAAA	59.397	34.615	17.19	0.00	0.00	1.52
16	17	6.121590	TGGAGCTCACTTCATATGCATTTAA	58.878	36.000	17.19	0.00	0.00	1.52
17	18	5.683681	TGGAGCTCACTTCATATGCATTTA	58.316	37.500	17.19	0.00	0.00	1.40
18	19	4.529897	TGGAGCTCACTTCATATGCATTT	58.470	39.130	17.19	0.00	0.00	2.32
19	20	4.160642	TGGAGCTCACTTCATATGCATT	57.839	40.909	17.19	0.00	0.00	3.56
20	21	3.851458	TGGAGCTCACTTCATATGCAT	57.149	42.857	17.19	3.79	0.00	3.96
21	22	3.851458	ATGGAGCTCACTTCATATGCA	57.149	42.857	17.19	0.00	40.61	3.96
39	40	2.196749	GCGGTCGCCATATGAGATATG	58.803	52.381	3.65	0.00	41.75	1.78
40	41	2.586258	GCGGTCGCCATATGAGATAT	57.414	50.000	3.65	0.00	34.56	1.63
42	43	4.996976	GCGGTCGCCATATGAGAT	57.003	55.556	3.65	0.00	34.56	2.75
52	53	2.648454	AAAAATGGTGGCGGTCGC	59.352	55.556	6.83	6.83	41.06	5.19
69	70	9.398538	ACAAAACCTCCGTATAATTATAGCAAA	57.601	29.630	5.39	0.00	0.00	3.68
70	71	8.967664	ACAAAACCTCCGTATAATTATAGCAA	57.032	30.769	5.39	0.00	0.00	3.91
79	80	9.048446	GCAGAAATATACAAAACCTCCGTATAA	57.952	33.333	0.00	0.00	33.17	0.98
80	81	8.426489	AGCAGAAATATACAAAACCTCCGTATA	58.574	33.333	0.00	0.00	33.77	1.47
81	82	7.226720	CAGCAGAAATATACAAAACCTCCGTAT	59.773	37.037	0.00	0.00	0.00	3.06
82	83	6.537301	CAGCAGAAATATACAAAACCTCCGTA	59.463	38.462	0.00	0.00	0.00	4.02
83	84	5.354234	CAGCAGAAATATACAAAACCTCCGT	59.646	40.000	0.00	0.00	0.00	4.69
84	85	5.730568	GCAGCAGAAATATACAAAACCTCCG	60.731	44.000	0.00	0.00	0.00	4.63
85	86	5.125417	TGCAGCAGAAATATACAAAACCTCC	59.875	40.000	0.00	0.00	0.00	4.30
86	87	6.194796	TGCAGCAGAAATATACAAAACCTC	57.805	37.500	0.00	0.00	0.00	3.85
87	88	6.567050	CATGCAGCAGAAATATACAAAACCT	58.433	36.000	0.00	0.00	0.00	3.50
88	89	5.232838	GCATGCAGCAGAAATATACAAAACC	59.767	40.000	14.21	0.00	44.79	3.27
89	90	6.264909	GCATGCAGCAGAAATATACAAAAC	57.735	37.500	14.21	0.00	44.79	2.43
115	116	3.120095	CGTGATTAAAAAGGAACGGGGAC	60.120	47.826	0.00	0.00	0.00	4.46
116	117	3.075884	CGTGATTAAAAAGGAACGGGGA	58.924	45.455	0.00	0.00	0.00	4.81
117	118	2.414957	GCGTGATTAAAAAGGAACGGGG	60.415	50.000	0.00	0.00	0.00	5.73
118	119	2.414957	GGCGTGATTAAAAAGGAACGGG	60.415	50.000	0.00	0.00	0.00	5.28
119	120	2.226912	TGGCGTGATTAAAAAGGAACGG	59.773	45.455	0.00	0.00	0.00	4.44
120	121	3.546002	TGGCGTGATTAAAAAGGAACG	57.454	42.857	0.00	0.00	0.00	3.95
121	122	7.646526	GGTAATATGGCGTGATTAAAAAGGAAC	59.353	37.037	0.00	0.00	0.00	3.62
122	123	7.201839	GGGTAATATGGCGTGATTAAAAAGGAA	60.202	37.037	0.00	0.00	0.00	3.36
123	124	6.263617	GGGTAATATGGCGTGATTAAAAAGGA	59.736	38.462	0.00	0.00	0.00	3.36
124	125	6.443792	GGGTAATATGGCGTGATTAAAAAGG	58.556	40.000	0.00	0.00	0.00	3.11
125	126	6.039941	TGGGGTAATATGGCGTGATTAAAAAG	59.960	38.462	0.00	0.00	0.00	2.27
126	127	5.892119	TGGGGTAATATGGCGTGATTAAAAA	59.108	36.000	0.00	0.00	0.00	1.94
127	128	5.299782	GTGGGGTAATATGGCGTGATTAAAA	59.700	40.000	0.00	0.00	0.00	1.52
128	129	4.822896	GTGGGGTAATATGGCGTGATTAAA	59.177	41.667	0.00	0.00	0.00	1.52
129	130	4.391155	GTGGGGTAATATGGCGTGATTAA	58.609	43.478	0.00	0.00	0.00	1.40
130	131	3.244630	GGTGGGGTAATATGGCGTGATTA	60.245	47.826	0.00	0.00	0.00	1.75
131	132	2.488347	GGTGGGGTAATATGGCGTGATT	60.488	50.000	0.00	0.00	0.00	2.57
132	133	1.073284	GGTGGGGTAATATGGCGTGAT	59.927	52.381	0.00	0.00	0.00	3.06
133	134	0.470766	GGTGGGGTAATATGGCGTGA	59.529	55.000	0.00	0.00	0.00	4.35
134	135	0.536460	GGGTGGGGTAATATGGCGTG	60.536	60.000	0.00	0.00	0.00	5.34
135	136	0.696485	AGGGTGGGGTAATATGGCGT	60.696	55.000	0.00	0.00	0.00	5.68
136	137	0.036306	GAGGGTGGGGTAATATGGCG	59.964	60.000	0.00	0.00	0.00	5.69
137	138	0.404426	GGAGGGTGGGGTAATATGGC	59.596	60.000	0.00	0.00	0.00	4.40
138	139	2.133858	AGGAGGGTGGGGTAATATGG	57.866	55.000	0.00	0.00	0.00	2.74
139	140	3.870559	ACTAGGAGGGTGGGGTAATATG	58.129	50.000	0.00	0.00	0.00	1.78
140	141	4.588387	AACTAGGAGGGTGGGGTAATAT	57.412	45.455	0.00	0.00	0.00	1.28
141	142	4.372953	AAACTAGGAGGGTGGGGTAATA	57.627	45.455	0.00	0.00	0.00	0.98
142	143	2.984989	AACTAGGAGGGTGGGGTAAT	57.015	50.000	0.00	0.00	0.00	1.89
143	144	2.747083	AAACTAGGAGGGTGGGGTAA	57.253	50.000	0.00	0.00	0.00	2.85
144	145	3.660959	CATAAACTAGGAGGGTGGGGTA	58.339	50.000	0.00	0.00	0.00	3.69
145	146	2.488836	CATAAACTAGGAGGGTGGGGT	58.511	52.381	0.00	0.00	0.00	4.95
146	147	1.143073	GCATAAACTAGGAGGGTGGGG	59.857	57.143	0.00	0.00	0.00	4.96
147	148	2.127708	AGCATAAACTAGGAGGGTGGG	58.872	52.381	0.00	0.00	0.00	4.61
148	149	2.158755	CCAGCATAAACTAGGAGGGTGG	60.159	54.545	9.16	9.16	37.54	4.61
149	150	2.771943	TCCAGCATAAACTAGGAGGGTG	59.228	50.000	0.00	0.00	0.00	4.61
150	151	2.772515	GTCCAGCATAAACTAGGAGGGT	59.227	50.000	0.00	0.00	0.00	4.34
151	152	2.104963	GGTCCAGCATAAACTAGGAGGG	59.895	54.545	0.00	0.00	0.00	4.30
152	153	2.771943	TGGTCCAGCATAAACTAGGAGG	59.228	50.000	0.00	0.00	0.00	4.30
153	154	3.452627	ACTGGTCCAGCATAAACTAGGAG	59.547	47.826	19.40	0.00	34.37	3.69
154	155	3.450904	ACTGGTCCAGCATAAACTAGGA	58.549	45.455	19.40	0.00	34.37	2.94
155	156	3.914426	ACTGGTCCAGCATAAACTAGG	57.086	47.619	19.40	0.00	34.37	3.02
156	157	5.105310	ACAGTACTGGTCCAGCATAAACTAG	60.105	44.000	26.12	10.94	34.37	2.57
157	158	4.775780	ACAGTACTGGTCCAGCATAAACTA	59.224	41.667	26.12	0.00	34.37	2.24
158	159	3.583086	ACAGTACTGGTCCAGCATAAACT	59.417	43.478	26.12	11.36	34.37	2.66
159	160	3.939066	ACAGTACTGGTCCAGCATAAAC	58.061	45.455	26.12	9.37	34.37	2.01
160	161	4.634012	AACAGTACTGGTCCAGCATAAA	57.366	40.909	26.12	0.00	34.37	1.40
161	162	4.081309	GGTAACAGTACTGGTCCAGCATAA	60.081	45.833	26.12	0.00	34.37	1.90
162	163	3.449737	GGTAACAGTACTGGTCCAGCATA	59.550	47.826	26.12	1.75	34.37	3.14
163	164	2.236395	GGTAACAGTACTGGTCCAGCAT	59.764	50.000	26.12	2.82	34.37	3.79
164	165	1.621814	GGTAACAGTACTGGTCCAGCA	59.378	52.381	26.12	2.59	34.37	4.41
165	166	1.403780	CGGTAACAGTACTGGTCCAGC	60.404	57.143	26.12	14.45	34.37	4.85
166	167	2.165167	TCGGTAACAGTACTGGTCCAG	58.835	52.381	26.12	17.88	37.23	3.86
167	168	2.291209	TCGGTAACAGTACTGGTCCA	57.709	50.000	26.12	3.30	37.23	4.02
168	169	2.494870	ACATCGGTAACAGTACTGGTCC	59.505	50.000	26.12	20.13	37.23	4.46
169	170	3.057033	ACACATCGGTAACAGTACTGGTC	60.057	47.826	26.12	13.66	37.23	4.02
170	171	2.895404	ACACATCGGTAACAGTACTGGT	59.105	45.455	26.12	22.89	37.23	4.00
171	172	3.587797	ACACATCGGTAACAGTACTGG	57.412	47.619	26.12	8.66	37.23	4.00
172	173	4.082625	TGGTACACATCGGTAACAGTACTG	60.083	45.833	21.44	21.44	36.09	2.74
173	174	4.081406	TGGTACACATCGGTAACAGTACT	58.919	43.478	0.00	0.00	36.09	2.73
174	175	4.439305	TGGTACACATCGGTAACAGTAC	57.561	45.455	0.00	0.00	36.09	2.73
189	190	1.682849	GGTGGCTCCATGTGGTACA	59.317	57.895	0.00	0.00	36.34	2.90
190	191	1.077716	GGGTGGCTCCATGTGGTAC	60.078	63.158	8.03	0.00	38.11	3.34
191	192	0.918799	ATGGGTGGCTCCATGTGGTA	60.919	55.000	8.03	0.00	45.13	3.25
192	193	0.918799	TATGGGTGGCTCCATGTGGT	60.919	55.000	18.59	0.99	46.19	4.16
193	194	0.479815	ATATGGGTGGCTCCATGTGG	59.520	55.000	18.59	0.00	46.19	4.17
194	195	2.233271	GAATATGGGTGGCTCCATGTG	58.767	52.381	18.59	0.00	46.19	3.21
195	196	1.202806	CGAATATGGGTGGCTCCATGT	60.203	52.381	18.59	11.82	46.19	3.21
196	197	1.072173	TCGAATATGGGTGGCTCCATG	59.928	52.381	18.59	6.30	46.19	3.66
198	199	0.468226	GTCGAATATGGGTGGCTCCA	59.532	55.000	8.03	5.27	41.60	3.86
199	200	0.759346	AGTCGAATATGGGTGGCTCC	59.241	55.000	0.00	0.00	0.00	4.70
200	201	2.614057	CAAAGTCGAATATGGGTGGCTC	59.386	50.000	0.00	0.00	0.00	4.70
201	202	2.643551	CAAAGTCGAATATGGGTGGCT	58.356	47.619	0.00	0.00	0.00	4.75
202	203	1.065551	GCAAAGTCGAATATGGGTGGC	59.934	52.381	0.00	0.00	0.00	5.01
203	204	2.097466	GTGCAAAGTCGAATATGGGTGG	59.903	50.000	0.00	0.00	0.00	4.61
204	205	2.223021	CGTGCAAAGTCGAATATGGGTG	60.223	50.000	0.00	0.00	0.00	4.61
205	206	2.006888	CGTGCAAAGTCGAATATGGGT	58.993	47.619	0.00	0.00	0.00	4.51
206	207	2.006888	ACGTGCAAAGTCGAATATGGG	58.993	47.619	1.06	0.00	0.00	4.00
207	208	4.270084	ACATACGTGCAAAGTCGAATATGG	59.730	41.667	0.00	0.00	0.00	2.74
208	209	5.389642	ACATACGTGCAAAGTCGAATATG	57.610	39.130	0.00	3.19	0.00	1.78
209	210	6.091577	TCAAACATACGTGCAAAGTCGAATAT	59.908	34.615	0.00	0.00	0.00	1.28
210	211	5.405873	TCAAACATACGTGCAAAGTCGAATA	59.594	36.000	0.00	0.00	0.00	1.75
211	212	4.212425	TCAAACATACGTGCAAAGTCGAAT	59.788	37.500	0.00	0.00	0.00	3.34
212	213	3.556365	TCAAACATACGTGCAAAGTCGAA	59.444	39.130	0.00	0.00	0.00	3.71
213	214	3.124560	TCAAACATACGTGCAAAGTCGA	58.875	40.909	0.00	0.00	0.00	4.20
214	215	3.513462	TCAAACATACGTGCAAAGTCG	57.487	42.857	0.00	0.00	0.00	4.18
215	216	7.464358	AGATTATCAAACATACGTGCAAAGTC	58.536	34.615	0.00	0.00	0.00	3.01
216	217	7.377766	AGATTATCAAACATACGTGCAAAGT	57.622	32.000	0.00	0.00	0.00	2.66
217	218	9.935682	ATTAGATTATCAAACATACGTGCAAAG	57.064	29.630	0.00	0.00	0.00	2.77
218	219	9.929722	GATTAGATTATCAAACATACGTGCAAA	57.070	29.630	0.00	0.00	0.00	3.68
219	220	9.325198	AGATTAGATTATCAAACATACGTGCAA	57.675	29.630	0.00	0.00	0.00	4.08
220	221	8.887036	AGATTAGATTATCAAACATACGTGCA	57.113	30.769	0.00	0.00	0.00	4.57
227	228	8.877779	GCGATGCTAGATTAGATTATCAAACAT	58.122	33.333	0.00	0.00	0.00	2.71
228	229	7.331934	GGCGATGCTAGATTAGATTATCAAACA	59.668	37.037	0.00	0.00	0.00	2.83
229	230	7.547370	AGGCGATGCTAGATTAGATTATCAAAC	59.453	37.037	0.00	0.00	0.00	2.93
230	231	7.547019	CAGGCGATGCTAGATTAGATTATCAAA	59.453	37.037	0.00	0.00	0.00	2.69
231	232	7.038048	CAGGCGATGCTAGATTAGATTATCAA	58.962	38.462	0.00	0.00	0.00	2.57
232	233	6.378280	TCAGGCGATGCTAGATTAGATTATCA	59.622	38.462	0.00	0.00	0.00	2.15
233	234	6.800543	TCAGGCGATGCTAGATTAGATTATC	58.199	40.000	0.00	0.00	0.00	1.75
234	235	6.782082	TCAGGCGATGCTAGATTAGATTAT	57.218	37.500	0.00	0.00	0.00	1.28
235	236	6.782082	ATCAGGCGATGCTAGATTAGATTA	57.218	37.500	0.00	0.00	0.00	1.75
236	237	5.674052	ATCAGGCGATGCTAGATTAGATT	57.326	39.130	0.00	0.00	0.00	2.40
237	238	5.674052	AATCAGGCGATGCTAGATTAGAT	57.326	39.130	0.00	0.00	33.25	1.98
238	239	5.474578	AAATCAGGCGATGCTAGATTAGA	57.525	39.130	0.00	0.00	33.62	2.10
239	240	5.931146	AGAAAATCAGGCGATGCTAGATTAG	59.069	40.000	0.00	0.00	33.62	1.73
240	241	5.698089	CAGAAAATCAGGCGATGCTAGATTA	59.302	40.000	0.00	0.00	33.62	1.75
241	242	4.514441	CAGAAAATCAGGCGATGCTAGATT	59.486	41.667	0.00	4.32	35.13	2.40
242	243	4.063689	CAGAAAATCAGGCGATGCTAGAT	58.936	43.478	0.00	0.00	30.13	1.98
243	244	3.461061	CAGAAAATCAGGCGATGCTAGA	58.539	45.455	0.00	0.00	30.13	2.43
244	245	2.547211	CCAGAAAATCAGGCGATGCTAG	59.453	50.000	0.00	0.00	30.13	3.42
245	246	2.092968	ACCAGAAAATCAGGCGATGCTA	60.093	45.455	0.00	0.00	30.13	3.49
246	247	1.340405	ACCAGAAAATCAGGCGATGCT	60.340	47.619	0.00	0.00	30.13	3.79
247	248	1.098050	ACCAGAAAATCAGGCGATGC	58.902	50.000	0.00	0.00	30.13	3.91
248	249	1.402968	CCACCAGAAAATCAGGCGATG	59.597	52.381	0.00	0.00	30.13	3.84
249	250	1.755179	CCACCAGAAAATCAGGCGAT	58.245	50.000	0.00	0.00	0.00	4.58
250	251	0.960364	GCCACCAGAAAATCAGGCGA	60.960	55.000	0.00	0.00	31.88	5.54
251	252	1.508088	GCCACCAGAAAATCAGGCG	59.492	57.895	0.00	0.00	31.88	5.52
252	253	0.899717	TGGCCACCAGAAAATCAGGC	60.900	55.000	0.00	0.00	41.29	4.85
253	254	0.890683	GTGGCCACCAGAAAATCAGG	59.109	55.000	26.31	0.00	32.34	3.86
254	255	1.619654	TGTGGCCACCAGAAAATCAG	58.380	50.000	32.62	0.00	32.34	2.90
255	256	1.962807	CTTGTGGCCACCAGAAAATCA	59.037	47.619	32.62	8.20	36.36	2.57
256	257	1.963515	ACTTGTGGCCACCAGAAAATC	59.036	47.619	36.49	10.46	36.36	2.17
257	258	2.086610	ACTTGTGGCCACCAGAAAAT	57.913	45.000	36.49	16.50	36.36	1.82
258	259	2.582052	CTACTTGTGGCCACCAGAAAA	58.418	47.619	36.49	21.78	36.36	2.29
259	260	1.202879	CCTACTTGTGGCCACCAGAAA	60.203	52.381	36.49	24.02	36.36	2.52
260	261	0.400213	CCTACTTGTGGCCACCAGAA	59.600	55.000	36.49	22.46	34.33	3.02
261	262	0.472925	TCCTACTTGTGGCCACCAGA	60.473	55.000	36.49	21.43	32.34	3.86
262	263	0.400213	TTCCTACTTGTGGCCACCAG	59.600	55.000	32.62	31.35	32.34	4.00
263	264	0.400213	CTTCCTACTTGTGGCCACCA	59.600	55.000	32.62	21.67	0.00	4.17
264	265	0.400594	ACTTCCTACTTGTGGCCACC	59.599	55.000	32.62	15.42	0.00	4.61
265	266	2.152016	GAACTTCCTACTTGTGGCCAC	58.848	52.381	29.67	29.67	0.00	5.01
266	267	1.771854	TGAACTTCCTACTTGTGGCCA	59.228	47.619	0.00	0.00	0.00	5.36
267	268	2.561478	TGAACTTCCTACTTGTGGCC	57.439	50.000	0.00	0.00	0.00	5.36
268	269	3.189287	CACATGAACTTCCTACTTGTGGC	59.811	47.826	0.00	0.00	36.63	5.01
269	270	4.641396	TCACATGAACTTCCTACTTGTGG	58.359	43.478	0.00	0.00	38.93	4.17
270	271	5.541845	TCTCACATGAACTTCCTACTTGTG	58.458	41.667	0.00	0.00	39.40	3.33
271	272	5.808366	TCTCACATGAACTTCCTACTTGT	57.192	39.130	0.00	0.00	0.00	3.16
272	273	5.991606	TGTTCTCACATGAACTTCCTACTTG	59.008	40.000	0.00	0.00	44.63	3.16
273	274	6.174720	TGTTCTCACATGAACTTCCTACTT	57.825	37.500	0.00	0.00	44.63	2.24
274	275	5.808366	TGTTCTCACATGAACTTCCTACT	57.192	39.130	0.00	0.00	44.63	2.57
275	276	8.035394	TCTATTGTTCTCACATGAACTTCCTAC	58.965	37.037	0.00	0.00	44.63	3.18
276	277	8.134202	TCTATTGTTCTCACATGAACTTCCTA	57.866	34.615	0.00	0.00	44.63	2.94
277	278	7.009179	TCTATTGTTCTCACATGAACTTCCT	57.991	36.000	0.00	0.00	44.63	3.36
278	279	7.856145	ATCTATTGTTCTCACATGAACTTCC	57.144	36.000	0.00	0.00	44.63	3.46
287	288	9.725019	ACAAGTTCATTATCTATTGTTCTCACA	57.275	29.630	0.00	0.00	0.00	3.58
288	289	9.979270	CACAAGTTCATTATCTATTGTTCTCAC	57.021	33.333	0.00	0.00	0.00	3.51
289	290	9.942850	TCACAAGTTCATTATCTATTGTTCTCA	57.057	29.630	0.00	0.00	0.00	3.27
294	295	9.685276	TCCAATCACAAGTTCATTATCTATTGT	57.315	29.630	0.00	0.00	0.00	2.71
297	298	9.293404	CCATCCAATCACAAGTTCATTATCTAT	57.707	33.333	0.00	0.00	0.00	1.98
298	299	8.274322	ACCATCCAATCACAAGTTCATTATCTA	58.726	33.333	0.00	0.00	0.00	1.98
299	300	7.121382	ACCATCCAATCACAAGTTCATTATCT	58.879	34.615	0.00	0.00	0.00	1.98
300	301	7.338800	ACCATCCAATCACAAGTTCATTATC	57.661	36.000	0.00	0.00	0.00	1.75
301	302	7.722949	AACCATCCAATCACAAGTTCATTAT	57.277	32.000	0.00	0.00	0.00	1.28
302	303	7.667635	TGTAACCATCCAATCACAAGTTCATTA	59.332	33.333	0.00	0.00	0.00	1.90
303	304	6.493115	TGTAACCATCCAATCACAAGTTCATT	59.507	34.615	0.00	0.00	0.00	2.57
304	305	6.009589	TGTAACCATCCAATCACAAGTTCAT	58.990	36.000	0.00	0.00	0.00	2.57
305	306	5.380900	TGTAACCATCCAATCACAAGTTCA	58.619	37.500	0.00	0.00	0.00	3.18
306	307	5.957842	TGTAACCATCCAATCACAAGTTC	57.042	39.130	0.00	0.00	0.00	3.01
307	308	6.723298	TTTGTAACCATCCAATCACAAGTT	57.277	33.333	0.00	0.00	0.00	2.66
308	309	6.723298	TTTTGTAACCATCCAATCACAAGT	57.277	33.333	0.00	0.00	0.00	3.16
309	310	7.169645	CACTTTTTGTAACCATCCAATCACAAG	59.830	37.037	0.00	0.00	0.00	3.16
310	311	6.983307	CACTTTTTGTAACCATCCAATCACAA	59.017	34.615	0.00	0.00	0.00	3.33
311	312	6.462207	CCACTTTTTGTAACCATCCAATCACA	60.462	38.462	0.00	0.00	0.00	3.58
312	313	5.925969	CCACTTTTTGTAACCATCCAATCAC	59.074	40.000	0.00	0.00	0.00	3.06
313	314	5.600484	ACCACTTTTTGTAACCATCCAATCA	59.400	36.000	0.00	0.00	0.00	2.57
314	315	6.096673	ACCACTTTTTGTAACCATCCAATC	57.903	37.500	0.00	0.00	0.00	2.67
315	316	6.126911	ACAACCACTTTTTGTAACCATCCAAT	60.127	34.615	0.00	0.00	35.38	3.16
316	317	5.187967	ACAACCACTTTTTGTAACCATCCAA	59.812	36.000	0.00	0.00	35.38	3.53
317	318	4.712337	ACAACCACTTTTTGTAACCATCCA	59.288	37.500	0.00	0.00	35.38	3.41
318	319	5.270893	ACAACCACTTTTTGTAACCATCC	57.729	39.130	0.00	0.00	35.38	3.51
319	320	6.040054	AGGTACAACCACTTTTTGTAACCATC	59.960	38.462	6.66	0.00	44.84	3.51
320	321	5.894964	AGGTACAACCACTTTTTGTAACCAT	59.105	36.000	6.66	0.00	44.84	3.55
321	322	5.262804	AGGTACAACCACTTTTTGTAACCA	58.737	37.500	6.66	0.00	44.84	3.67
322	323	5.840243	AGGTACAACCACTTTTTGTAACC	57.160	39.130	6.66	6.32	44.84	2.85
323	324	6.854778	TGAAGGTACAACCACTTTTTGTAAC	58.145	36.000	2.67	2.67	44.32	2.50
324	325	7.314393	GTTGAAGGTACAACCACTTTTTGTAA	58.686	34.615	0.00	0.00	41.95	2.41
325	326	6.854778	GTTGAAGGTACAACCACTTTTTGTA	58.145	36.000	0.00	0.00	41.95	2.41
326	327	5.716094	GTTGAAGGTACAACCACTTTTTGT	58.284	37.500	0.00	0.00	41.95	2.83
336	337	6.128090	GGTGCTTAATAGGTTGAAGGTACAAC	60.128	42.308	0.00	0.00	46.20	3.32
337	338	5.941647	GGTGCTTAATAGGTTGAAGGTACAA	59.058	40.000	0.00	0.00	0.00	2.41
338	339	5.013287	TGGTGCTTAATAGGTTGAAGGTACA	59.987	40.000	0.00	0.00	0.00	2.90
339	340	5.493809	TGGTGCTTAATAGGTTGAAGGTAC	58.506	41.667	0.00	0.00	0.00	3.34
340	341	5.765576	TGGTGCTTAATAGGTTGAAGGTA	57.234	39.130	0.00	0.00	0.00	3.08
341	342	4.650972	TGGTGCTTAATAGGTTGAAGGT	57.349	40.909	0.00	0.00	0.00	3.50
342	343	5.975693	TTTGGTGCTTAATAGGTTGAAGG	57.024	39.130	0.00	0.00	0.00	3.46
343	344	6.405842	GGGATTTGGTGCTTAATAGGTTGAAG	60.406	42.308	0.00	0.00	0.00	3.02
344	345	5.420739	GGGATTTGGTGCTTAATAGGTTGAA	59.579	40.000	0.00	0.00	0.00	2.69
345	346	4.953579	GGGATTTGGTGCTTAATAGGTTGA	59.046	41.667	0.00	0.00	0.00	3.18
346	347	4.099419	GGGGATTTGGTGCTTAATAGGTTG	59.901	45.833	0.00	0.00	0.00	3.77
347	348	4.286707	GGGGATTTGGTGCTTAATAGGTT	58.713	43.478	0.00	0.00	0.00	3.50
348	349	3.687264	CGGGGATTTGGTGCTTAATAGGT	60.687	47.826	0.00	0.00	0.00	3.08
349	350	2.884639	CGGGGATTTGGTGCTTAATAGG	59.115	50.000	0.00	0.00	0.00	2.57
350	351	3.551846	ACGGGGATTTGGTGCTTAATAG	58.448	45.455	0.00	0.00	0.00	1.73
351	352	3.655615	ACGGGGATTTGGTGCTTAATA	57.344	42.857	0.00	0.00	0.00	0.98
352	353	2.525105	ACGGGGATTTGGTGCTTAAT	57.475	45.000	0.00	0.00	0.00	1.40
353	354	2.296073	AACGGGGATTTGGTGCTTAA	57.704	45.000	0.00	0.00	0.00	1.85
354	355	2.296073	AAACGGGGATTTGGTGCTTA	57.704	45.000	0.00	0.00	0.00	3.09
355	356	1.069978	CAAAACGGGGATTTGGTGCTT	59.930	47.619	0.00	0.00	34.81	3.91
356	357	0.678950	CAAAACGGGGATTTGGTGCT	59.321	50.000	0.00	0.00	34.81	4.40
357	358	3.209266	CAAAACGGGGATTTGGTGC	57.791	52.632	0.00	0.00	34.81	5.01
375	376	4.523173	TCATCACGAGATAAGATGGGTACC	59.477	45.833	2.17	2.17	40.72	3.34
376	377	5.707242	TCATCACGAGATAAGATGGGTAC	57.293	43.478	0.00	0.00	39.59	3.34
377	378	5.833667	ACTTCATCACGAGATAAGATGGGTA	59.166	40.000	14.19	0.00	39.59	3.69
378	379	4.651503	ACTTCATCACGAGATAAGATGGGT	59.348	41.667	14.19	0.00	39.59	4.51
379	380	5.207110	ACTTCATCACGAGATAAGATGGG	57.793	43.478	14.19	0.00	39.59	4.00
380	381	5.221322	TGGACTTCATCACGAGATAAGATGG	60.221	44.000	14.19	0.00	39.59	3.51
381	382	5.836347	TGGACTTCATCACGAGATAAGATG	58.164	41.667	14.19	0.00	40.29	2.90
382	383	6.471233	TTGGACTTCATCACGAGATAAGAT	57.529	37.500	14.19	0.00	31.88	2.40
383	384	5.914898	TTGGACTTCATCACGAGATAAGA	57.085	39.130	14.19	0.68	31.88	2.10
384	385	6.364706	GCTATTGGACTTCATCACGAGATAAG	59.635	42.308	0.00	3.40	31.88	1.73
385	386	6.040955	AGCTATTGGACTTCATCACGAGATAA	59.959	38.462	0.00	0.00	31.88	1.75
386	387	5.536538	AGCTATTGGACTTCATCACGAGATA	59.463	40.000	0.00	0.00	31.88	1.98
387	388	4.343526	AGCTATTGGACTTCATCACGAGAT	59.656	41.667	0.00	0.00	33.87	2.75
388	389	3.701542	AGCTATTGGACTTCATCACGAGA	59.298	43.478	0.00	0.00	0.00	4.04
389	390	3.801050	CAGCTATTGGACTTCATCACGAG	59.199	47.826	0.00	0.00	0.00	4.18
390	391	3.785486	CAGCTATTGGACTTCATCACGA	58.215	45.455	0.00	0.00	0.00	4.35
391	392	2.286294	GCAGCTATTGGACTTCATCACG	59.714	50.000	0.00	0.00	0.00	4.35
392	393	2.615912	GGCAGCTATTGGACTTCATCAC	59.384	50.000	0.00	0.00	0.00	3.06
393	394	2.421952	GGGCAGCTATTGGACTTCATCA	60.422	50.000	0.00	0.00	0.00	3.07
394	395	2.225467	GGGCAGCTATTGGACTTCATC	58.775	52.381	0.00	0.00	0.00	2.92
395	396	1.565759	TGGGCAGCTATTGGACTTCAT	59.434	47.619	0.00	0.00	0.00	2.57
396	397	0.991146	TGGGCAGCTATTGGACTTCA	59.009	50.000	0.00	0.00	0.00	3.02
397	398	2.128771	TTGGGCAGCTATTGGACTTC	57.871	50.000	0.00	0.00	0.00	3.01
402	403	2.166254	ACGATTTTTGGGCAGCTATTGG	59.834	45.455	0.00	0.00	0.00	3.16
420	421	1.248486	CTGTTGAGGTCTCTGGACGA	58.752	55.000	0.00	0.00	42.97	4.20
421	422	0.244994	CCTGTTGAGGTCTCTGGACG	59.755	60.000	0.00	0.00	42.97	4.79
422	423	1.548269	CTCCTGTTGAGGTCTCTGGAC	59.452	57.143	0.00	0.00	40.76	4.02
447	448	1.283029	TGAATTAGCTCAGCCAAGCCT	59.717	47.619	0.00	0.00	43.56	4.58
454	455	1.935873	TGCGATGTGAATTAGCTCAGC	59.064	47.619	0.00	0.00	0.00	4.26
471	473	4.669728	GCGTAGTACTATTTGTAGTCTGCG	59.330	45.833	5.75	14.46	36.94	5.18
479	481	5.809051	GCTGGTTTAGCGTAGTACTATTTGT	59.191	40.000	5.75	0.00	43.63	2.83
519	525	0.173708	GGTGAGGCTGAGGTAGTTCG	59.826	60.000	0.00	0.00	0.00	3.95
623	643	3.150949	CCGCCATGCTCTGGGATA	58.849	61.111	7.82	0.00	46.06	2.59
739	773	9.770097	CTGATACACATGGTGACTAATTAATCT	57.230	33.333	2.98	0.00	36.96	2.40
740	774	8.499162	GCTGATACACATGGTGACTAATTAATC	58.501	37.037	2.98	0.00	36.96	1.75
741	775	8.213679	AGCTGATACACATGGTGACTAATTAAT	58.786	33.333	2.98	0.00	36.96	1.40
742	776	7.495606	CAGCTGATACACATGGTGACTAATTAA	59.504	37.037	8.42	0.00	36.96	1.40
743	777	6.986231	CAGCTGATACACATGGTGACTAATTA	59.014	38.462	8.42	0.00	36.96	1.40
744	778	5.819379	CAGCTGATACACATGGTGACTAATT	59.181	40.000	8.42	0.00	36.96	1.40
805	847	8.913487	TTAATGTGATGATTGATGTAGATGCT	57.087	30.769	0.00	0.00	0.00	3.79
894	960	1.298014	CAGCTCGCCTCCTTTCCTT	59.702	57.895	0.00	0.00	0.00	3.36
896	962	2.821810	GCAGCTCGCCTCCTTTCC	60.822	66.667	0.00	0.00	32.94	3.13
953	1027	2.941415	GCGAGATGTGGGTGGAATTCTT	60.941	50.000	5.23	0.00	0.00	2.52
1125	1230	1.078143	GCCGGAGACAAGCCAGATT	60.078	57.895	5.05	0.00	0.00	2.40
1150	1255	6.993308	TGTTTGCAGTAGTTACCAGTATTGAA	59.007	34.615	0.00	0.00	0.00	2.69
1190	1302	7.154656	AGAACGTGCATATGTATACATGATGT	58.845	34.615	25.48	15.12	37.15	3.06
1208	1331	8.557029	AGTAAAAATAAACAGAGGAAGAACGTG	58.443	33.333	0.00	0.00	0.00	4.49
1213	1336	8.157476	AGCAGAGTAAAAATAAACAGAGGAAGA	58.843	33.333	0.00	0.00	0.00	2.87
1232	1355	5.994250	TCAAGGCAAATCTAATAGCAGAGT	58.006	37.500	0.00	0.00	0.00	3.24
1233	1356	6.054295	ACTCAAGGCAAATCTAATAGCAGAG	58.946	40.000	0.00	0.00	0.00	3.35
1355	1501	9.888878	CACCTCATCAAATCAATATCATTACAC	57.111	33.333	0.00	0.00	0.00	2.90
1386	1532	6.823497	TCCGGTTCATAGAAAAGGGTAATAG	58.177	40.000	0.00	0.00	0.00	1.73
1388	1538	5.703730	TCCGGTTCATAGAAAAGGGTAAT	57.296	39.130	0.00	0.00	0.00	1.89
1393	1543	6.699575	ATTTGATCCGGTTCATAGAAAAGG	57.300	37.500	15.80	0.00	0.00	3.11
1490	1649	2.840651	AGAGACCATGGGGAGTGTTAAG	59.159	50.000	18.09	0.00	38.05	1.85
1619	1782	2.397044	AATTGGGGGTGAAGAGCAAA	57.603	45.000	0.00	0.00	0.00	3.68
1685	1849	7.984050	CGGTGAGAGGATATAATATTCAGCAAT	59.016	37.037	0.00	0.00	32.76	3.56
1706	1871	7.505258	TCATTTTGAGATAATGGATACGGTGA	58.495	34.615	0.00	0.00	42.51	4.02
1777	1944	3.149981	GCTTTGCTGTACTCTTTCCCTT	58.850	45.455	0.00	0.00	0.00	3.95
1816	1983	2.768769	TGGTTGTGGTGTCCCCGA	60.769	61.111	0.00	0.00	35.15	5.14
1960	2130	6.763610	AGAAATTCTGGTGATCCGACTTATTC	59.236	38.462	0.00	0.00	36.30	1.75
1963	2133	5.186992	TGAGAAATTCTGGTGATCCGACTTA	59.813	40.000	0.00	0.00	36.30	2.24
1964	2134	4.020218	TGAGAAATTCTGGTGATCCGACTT	60.020	41.667	0.00	0.00	36.30	3.01
1965	2135	3.515502	TGAGAAATTCTGGTGATCCGACT	59.484	43.478	0.00	0.00	36.30	4.18
1966	2136	3.861840	TGAGAAATTCTGGTGATCCGAC	58.138	45.455	0.00	0.00	36.30	4.79
1967	2137	3.769300	TCTGAGAAATTCTGGTGATCCGA	59.231	43.478	0.00	0.00	36.30	4.55
1968	2138	3.868077	GTCTGAGAAATTCTGGTGATCCG	59.132	47.826	0.00	0.00	36.30	4.18
1969	2139	5.096443	AGTCTGAGAAATTCTGGTGATCC	57.904	43.478	0.00	0.00	0.00	3.36
1970	2140	6.533367	GTGTAGTCTGAGAAATTCTGGTGATC	59.467	42.308	0.00	0.00	0.00	2.92
1971	2141	6.212388	AGTGTAGTCTGAGAAATTCTGGTGAT	59.788	38.462	0.00	0.00	0.00	3.06
1972	2142	5.540337	AGTGTAGTCTGAGAAATTCTGGTGA	59.460	40.000	0.00	0.00	0.00	4.02
1973	2143	5.788450	AGTGTAGTCTGAGAAATTCTGGTG	58.212	41.667	0.00	0.00	0.00	4.17
1974	2144	7.451877	TCTTAGTGTAGTCTGAGAAATTCTGGT	59.548	37.037	0.00	0.00	29.34	4.00
1975	2145	7.831753	TCTTAGTGTAGTCTGAGAAATTCTGG	58.168	38.462	0.00	0.00	29.34	3.86
1976	2146	8.735315	TCTCTTAGTGTAGTCTGAGAAATTCTG	58.265	37.037	0.00	0.00	31.46	3.02
1977	2147	8.871629	TCTCTTAGTGTAGTCTGAGAAATTCT	57.128	34.615	0.00	0.00	31.46	2.40
1996	2166	9.793252	GCAGATCAAGCAAAATTTAATCTCTTA	57.207	29.630	5.41	0.00	0.00	2.10
1997	2167	8.529476	AGCAGATCAAGCAAAATTTAATCTCTT	58.471	29.630	11.97	0.00	0.00	2.85
1998	2168	8.064336	AGCAGATCAAGCAAAATTTAATCTCT	57.936	30.769	11.97	0.00	0.00	3.10
1999	2169	9.448294	CTAGCAGATCAAGCAAAATTTAATCTC	57.552	33.333	11.97	0.00	0.00	2.75
2022	2192	6.621316	TTCATCGACCTAGCTAGAAACTAG	57.379	41.667	22.70	6.61	37.46	2.57
2037	2209	3.125316	GGTGGTCTGACAAATTCATCGAC	59.875	47.826	10.38	0.00	32.17	4.20
2181	2401	8.840200	AGGAAGAATAACATTAGTCTAGACCA	57.160	34.615	19.38	2.51	37.12	4.02
2198	2418	8.462016	CAATCCTTCGTATTTGAAAGGAAGAAT	58.538	33.333	14.03	1.62	39.88	2.40
2209	2429	7.786178	TGATAGAACCAATCCTTCGTATTTG	57.214	36.000	0.00	0.00	0.00	2.32
2216	2436	8.816894	TCCTATACATGATAGAACCAATCCTTC	58.183	37.037	0.00	0.00	40.18	3.46
2238	2458	9.866655	ATTTGCAGGAATAGAATATTGTTCCTA	57.133	29.630	18.75	9.54	46.48	2.94
2318	2572	5.476945	TGTCTTGGAATTTAGGCCTTCTTTC	59.523	40.000	12.58	11.54	0.00	2.62
2369	2624	5.107453	CGTTAAAGATGGACTCAACTGTGTC	60.107	44.000	3.80	3.80	37.70	3.67
2409	2669	2.831859	TGGCTGGCCATTTGTTTGA	58.168	47.368	5.51	0.00	41.89	2.69
2595	2856	1.282157	GGCATCACACCCTTTAGTCCT	59.718	52.381	0.00	0.00	0.00	3.85
2609	2870	1.502690	ACCGGTACTAATGGGCATCA	58.497	50.000	4.49	0.00	0.00	3.07
2653	2915	3.131755	CGAACCGGGACTAAAGGTCTAAT	59.868	47.826	6.32	0.00	43.97	1.73
2710	2972	0.672401	CGTGCCATGAACCGGTACTT	60.672	55.000	8.00	0.00	37.03	2.24
2772	3036	1.534729	AACTGAAAAGGCGATCCACC	58.465	50.000	0.00	0.00	33.74	4.61
3018	3368	3.136626	GCCTCTAGATCTTAAAAGCCCCA	59.863	47.826	0.00	0.00	0.00	4.96
3204	3609	6.737254	ATTAGTTTGACCATAGTTTGACCG	57.263	37.500	0.00	0.00	0.00	4.79
3817	4567	3.022406	GGAACCGAGACTAAAGGCTCTA	58.978	50.000	11.02	0.00	0.00	2.43
3849	4602	1.077930	GGCCTTTAGTCCCGGTTCC	60.078	63.158	0.00	0.00	0.00	3.62
3893	4691	4.347000	AGGGTGTGCTCACTAGTAGAAAAA	59.653	41.667	17.68	0.00	43.41	1.94
3909	4707	0.606401	ACCGAATGCTTGAGGGTGTG	60.606	55.000	0.00	0.00	0.00	3.82
3952	4752	2.881734	TGAGCATCGATGGAGGAGTAT	58.118	47.619	26.00	0.00	38.61	2.12
4053	4859	9.799106	AAATCCTCCTCTTACCATATTATGTTG	57.201	33.333	3.10	0.00	0.00	3.33
4123	5200	6.330278	CAATGCTATGATCTAATGCAATGGG	58.670	40.000	0.00	0.00	37.20	4.00
4156	5236	7.646130	CGCAATTTTAACCTGTTAGTCTTCAAA	59.354	33.333	0.00	0.00	0.00	2.69
4288	5909	5.243981	AGTGAACCTTTGATGAGATGTCAG	58.756	41.667	0.00	0.00	35.66	3.51
4369	5998	4.733077	TTTGAGGGATAAGTTTGGGACA	57.267	40.909	0.00	0.00	0.00	4.02
4370	5999	4.402474	CCATTTGAGGGATAAGTTTGGGAC	59.598	45.833	0.00	0.00	0.00	4.46
4371	6000	4.293634	TCCATTTGAGGGATAAGTTTGGGA	59.706	41.667	0.00	0.00	0.00	4.37
4372	6001	4.609301	TCCATTTGAGGGATAAGTTTGGG	58.391	43.478	0.00	0.00	0.00	4.12
4373	6002	5.658190	ACATCCATTTGAGGGATAAGTTTGG	59.342	40.000	0.00	0.00	43.24	3.28
4374	6003	6.780457	ACATCCATTTGAGGGATAAGTTTG	57.220	37.500	0.00	0.00	43.24	2.93
4375	6004	8.506083	AGATACATCCATTTGAGGGATAAGTTT	58.494	33.333	0.00	0.00	43.24	2.66
4376	6005	8.050316	AGATACATCCATTTGAGGGATAAGTT	57.950	34.615	0.00	0.00	43.24	2.66
4377	6006	7.639062	AGATACATCCATTTGAGGGATAAGT	57.361	36.000	0.00	0.00	43.24	2.24
4378	6007	7.768120	GCTAGATACATCCATTTGAGGGATAAG	59.232	40.741	0.00	0.00	43.24	1.73
4379	6008	7.237471	TGCTAGATACATCCATTTGAGGGATAA	59.763	37.037	0.00	0.00	43.24	1.75
4380	6009	6.730507	TGCTAGATACATCCATTTGAGGGATA	59.269	38.462	0.00	0.00	43.24	2.59
4381	6010	5.549228	TGCTAGATACATCCATTTGAGGGAT	59.451	40.000	0.00	0.00	45.98	3.85
4382	6011	4.907269	TGCTAGATACATCCATTTGAGGGA	59.093	41.667	0.00	0.00	39.14	4.20
4383	6012	4.999950	GTGCTAGATACATCCATTTGAGGG	59.000	45.833	0.00	0.00	0.00	4.30
4384	6013	5.862845	AGTGCTAGATACATCCATTTGAGG	58.137	41.667	0.00	0.00	0.00	3.86
4385	6014	9.499479	AATTAGTGCTAGATACATCCATTTGAG	57.501	33.333	0.00	0.00	0.00	3.02
4386	6015	9.851686	AAATTAGTGCTAGATACATCCATTTGA	57.148	29.630	0.00	0.00	0.00	2.69
4387	6016	9.888878	CAAATTAGTGCTAGATACATCCATTTG	57.111	33.333	0.00	2.71	0.00	2.32
4388	6017	9.851686	TCAAATTAGTGCTAGATACATCCATTT	57.148	29.630	0.00	0.00	0.00	2.32
4390	6019	9.445878	CATCAAATTAGTGCTAGATACATCCAT	57.554	33.333	0.00	0.00	0.00	3.41
4391	6020	7.388776	GCATCAAATTAGTGCTAGATACATCCA	59.611	37.037	0.00	0.00	36.02	3.41
4392	6021	7.605691	AGCATCAAATTAGTGCTAGATACATCC	59.394	37.037	9.58	0.00	46.54	3.51
4393	6022	8.545229	AGCATCAAATTAGTGCTAGATACATC	57.455	34.615	9.58	0.00	46.54	3.06
4403	6032	8.777413	TGAATGTATCTAGCATCAAATTAGTGC	58.223	33.333	2.41	2.41	39.10	4.40
4410	6039	8.843262	CCTCAAATGAATGTATCTAGCATCAAA	58.157	33.333	0.00	0.00	0.00	2.69
4411	6040	7.446319	CCCTCAAATGAATGTATCTAGCATCAA	59.554	37.037	0.00	0.00	0.00	2.57
4412	6041	6.938596	CCCTCAAATGAATGTATCTAGCATCA	59.061	38.462	0.00	0.00	0.00	3.07
4413	6042	7.118971	GTCCCTCAAATGAATGTATCTAGCATC	59.881	40.741	0.00	0.00	0.00	3.91
4414	6043	6.939163	GTCCCTCAAATGAATGTATCTAGCAT	59.061	38.462	0.00	0.00	0.00	3.79
4415	6044	6.126796	TGTCCCTCAAATGAATGTATCTAGCA	60.127	38.462	0.00	0.00	0.00	3.49
4416	6045	6.291377	TGTCCCTCAAATGAATGTATCTAGC	58.709	40.000	0.00	0.00	0.00	3.42
4417	6046	7.989741	ACTTGTCCCTCAAATGAATGTATCTAG	59.010	37.037	0.00	0.00	35.48	2.43
4418	6047	7.861629	ACTTGTCCCTCAAATGAATGTATCTA	58.138	34.615	0.00	0.00	35.48	1.98
4419	6048	6.725364	ACTTGTCCCTCAAATGAATGTATCT	58.275	36.000	0.00	0.00	35.48	1.98
4420	6049	7.396540	AACTTGTCCCTCAAATGAATGTATC	57.603	36.000	0.00	0.00	35.48	2.24
4421	6050	7.781324	AAACTTGTCCCTCAAATGAATGTAT	57.219	32.000	0.00	0.00	35.48	2.29
4422	6051	7.595819	AAAACTTGTCCCTCAAATGAATGTA	57.404	32.000	0.00	0.00	35.48	2.29
4423	6052	6.484364	AAAACTTGTCCCTCAAATGAATGT	57.516	33.333	0.00	0.00	35.48	2.71
4445	6074	3.050089	TGGTACTCCCTCTGTCCAAAAA	58.950	45.455	0.00	0.00	0.00	1.94
4446	6075	2.696775	TGGTACTCCCTCTGTCCAAAA	58.303	47.619	0.00	0.00	0.00	2.44
4447	6076	2.409064	TGGTACTCCCTCTGTCCAAA	57.591	50.000	0.00	0.00	0.00	3.28
4448	6077	2.642171	ATGGTACTCCCTCTGTCCAA	57.358	50.000	0.00	0.00	0.00	3.53
4449	6078	2.642171	AATGGTACTCCCTCTGTCCA	57.358	50.000	0.00	0.00	0.00	4.02
4450	6079	6.936968	ATATAAATGGTACTCCCTCTGTCC	57.063	41.667	0.00	0.00	0.00	4.02
4451	6080	7.963532	TGAATATAAATGGTACTCCCTCTGTC	58.036	38.462	0.00	0.00	0.00	3.51
4452	6081	7.931015	TGAATATAAATGGTACTCCCTCTGT	57.069	36.000	0.00	0.00	0.00	3.41
4453	6082	9.799106	ATTTGAATATAAATGGTACTCCCTCTG	57.201	33.333	0.00	0.00	0.00	3.35
4580	6212	5.695851	ATCGATTGAAATGTATTCCAGCC	57.304	39.130	0.00	0.00	0.00	4.85
4581	6213	6.728200	TGAATCGATTGAAATGTATTCCAGC	58.272	36.000	16.96	0.00	0.00	4.85
4585	6217	7.149015	GCTGCATGAATCGATTGAAATGTATTC	60.149	37.037	16.96	7.34	0.00	1.75
4590	6222	4.356289	TGCTGCATGAATCGATTGAAATG	58.644	39.130	16.96	16.15	0.00	2.32
4607	6239	2.749839	TACCCCACGCATTGCTGC	60.750	61.111	7.12	0.00	45.31	5.25
4608	6240	1.369091	GAGTACCCCACGCATTGCTG	61.369	60.000	7.12	4.31	0.00	4.41
4609	6241	1.078426	GAGTACCCCACGCATTGCT	60.078	57.895	7.12	0.00	0.00	3.91
4614	6250	0.330604	ACTAGAGAGTACCCCACGCA	59.669	55.000	0.00	0.00	32.65	5.24
4738	6809	5.629435	GCAAACTTGTGGTAAGCAGATAAAC	59.371	40.000	0.00	0.00	0.00	2.01
4819	6893	4.021456	CGTAGATGTGGCCCATAGATACAA	60.021	45.833	0.00	0.00	32.56	2.41
4916	6990	4.982295	GGAGAGTTTGCACCAACAAAATAC	59.018	41.667	4.19	0.00	40.99	1.89
5007	7081	3.525537	ACTAGTCATGATTCACCTTGCG	58.474	45.455	0.00	0.00	0.00	4.85
5021	7095	2.868839	GCCAGCGTTGGTTTACTAGTCA	60.869	50.000	20.17	0.00	46.80	3.41
5046	7122	1.344114	GCCCAAAGAATTCTTGTGCCA	59.656	47.619	21.15	0.00	36.12	4.92
5052	7128	5.183904	GTGTCATAGTGCCCAAAGAATTCTT	59.816	40.000	15.11	15.11	37.91	2.52
5068	7144	1.215244	CATCTGCGCAGGTGTCATAG	58.785	55.000	36.87	15.31	34.90	2.23
5083	7159	8.664669	AAATAGTAAAATTGTGGTTCCCATCT	57.335	30.769	0.00	0.00	35.28	2.90
5155	7231	6.580963	TCAATTCCAATTGTGTTTGAAACG	57.419	33.333	11.01	0.00	44.66	3.60
5197	7273	5.816682	GGAACCCATCCTCTCTTAGAAAAA	58.183	41.667	0.00	0.00	45.56	1.94
5198	7274	5.437191	GGAACCCATCCTCTCTTAGAAAA	57.563	43.478	0.00	0.00	45.56	2.29
5218	7624	1.061546	AAAGCAACGGGTCCTTAGGA	58.938	50.000	0.00	0.00	0.00	2.94
5318	7724	1.376649	ATTCAGGGTCCTTCTTGCCT	58.623	50.000	0.00	0.00	0.00	4.75
5348	7754	4.042311	TCTTGCAGGGACCTAATTGTTGTA	59.958	41.667	0.00	0.00	0.00	2.41
5351	7757	3.806949	TCTTGCAGGGACCTAATTGTT	57.193	42.857	0.00	0.00	0.00	2.83
5352	7758	3.372025	GGATCTTGCAGGGACCTAATTGT	60.372	47.826	0.00	0.00	0.00	2.71
5371	7777	0.541863	AGATTGCTTCCGTTCGGGAT	59.458	50.000	11.37	0.00	46.62	3.85
5379	7785	1.197721	GTGGTTGTGAGATTGCTTCCG	59.802	52.381	0.00	0.00	0.00	4.30
5402	7808	1.203440	AGTAGTGTGGGTTCCCATCCT	60.203	52.381	14.02	13.93	38.49	3.24
5440	7846	1.364171	GTCACTGGTCAGCAGACGT	59.636	57.895	11.79	0.00	45.92	4.34
5513	7919	2.478894	CTGCGTTCTTACCATTCACGTT	59.521	45.455	0.00	0.00	33.36	3.99
5533	7939	8.571336	AGTTACACTACAATACACTAAACGACT	58.429	33.333	0.00	0.00	0.00	4.18
5547	7953	6.717997	TCACACTGATAGGAGTTACACTACAA	59.282	38.462	0.00	0.00	29.09	2.41
5565	7971	1.291877	GGCGCTACCACTTCACACTG	61.292	60.000	7.64	0.00	38.86	3.66
5566	7972	1.004918	GGCGCTACCACTTCACACT	60.005	57.895	7.64	0.00	38.86	3.55
5613	8020	2.253758	CCACCGGCACAGTTGTCAG	61.254	63.158	0.00	0.00	0.00	3.51
5617	8024	0.250124	TAAGACCACCGGCACAGTTG	60.250	55.000	0.00	0.00	0.00	3.16
5625	8032	1.196104	TTCCCACCTAAGACCACCGG	61.196	60.000	0.00	0.00	0.00	5.28
5626	8033	0.249398	CTTCCCACCTAAGACCACCG	59.751	60.000	0.00	0.00	0.00	4.94
5627	8034	1.652947	TCTTCCCACCTAAGACCACC	58.347	55.000	0.00	0.00	0.00	4.61
5647	8054	4.623932	AAGGCACTAGATTTGTGAGACA	57.376	40.909	0.00	0.00	38.49	3.41
5694	8101	2.213499	GAATCATTCGACATCCGCCTT	58.787	47.619	0.00	0.00	38.37	4.35
5698	8105	4.687483	TGATGATGAATCATTCGACATCCG	59.313	41.667	22.55	0.00	46.84	4.18
5701	8108	6.990939	ACTCTTGATGATGAATCATTCGACAT	59.009	34.615	7.21	8.30	46.84	3.06
5734	8141	4.442706	ACTGCCAAGATATAAAGTGGTCG	58.557	43.478	0.00	0.00	33.43	4.79
5751	8158	1.069500	ACAACGCAATTTCGTACTGCC	60.069	47.619	2.99	0.00	42.46	4.85
5753	8160	4.145997	GGTAACAACGCAATTTCGTACTG	58.854	43.478	2.99	2.16	42.46	2.74
5807	8215	2.174363	TGCCAGCCATCGAATATCAG	57.826	50.000	0.00	0.00	0.00	2.90
5823	8231	7.981225	ACAACATGTATAAGGATTTTCAATGCC	59.019	33.333	0.00	0.00	0.00	4.40
5846	8266	1.428448	CCACGCTTGATCGAAGACAA	58.572	50.000	8.52	0.00	42.51	3.18
5847	8267	1.014044	GCCACGCTTGATCGAAGACA	61.014	55.000	8.52	0.00	42.51	3.41
5859	8279	3.511595	CGCCATCATTGCCACGCT	61.512	61.111	0.00	0.00	0.00	5.07
5882	8302	8.198778	ACAACACCTTTAAAAATGGATAAACGT	58.801	29.630	0.00	0.00	0.00	3.99
5883	8303	8.582433	ACAACACCTTTAAAAATGGATAAACG	57.418	30.769	0.00	0.00	0.00	3.60
5919	8339	7.668469	ACAATTTCTTCCCCGTAAAAAGAGTAT	59.332	33.333	0.00	0.00	31.16	2.12
5960	8381	2.313172	GCGCGCCATCATGGTCTAG	61.313	63.158	23.24	0.00	40.46	2.43
5961	8382	2.280119	GCGCGCCATCATGGTCTA	60.280	61.111	23.24	0.00	40.46	2.59
5965	8386	4.892379	CAACGCGCGCCATCATGG	62.892	66.667	32.58	12.27	41.55	3.66
5979	8400	1.356527	AAATAGACGGACGCGGCAAC	61.357	55.000	17.00	3.85	0.00	4.17
5980	8401	0.671163	AAAATAGACGGACGCGGCAA	60.671	50.000	17.00	0.00	0.00	4.52
5981	8402	1.079681	AAAATAGACGGACGCGGCA	60.080	52.632	17.00	0.00	0.00	5.69
5982	8403	1.347221	CAAAATAGACGGACGCGGC	59.653	57.895	12.47	7.53	0.00	6.53
5983	8404	1.347221	GCAAAATAGACGGACGCGG	59.653	57.895	12.47	0.00	0.00	6.46
5984	8405	0.247145	GTGCAAAATAGACGGACGCG	60.247	55.000	3.53	3.53	0.00	6.01
5985	8406	0.793861	TGTGCAAAATAGACGGACGC	59.206	50.000	0.00	0.00	0.00	5.19
5986	8407	6.519353	TTATATGTGCAAAATAGACGGACG	57.481	37.500	0.00	0.00	0.00	4.79
5988	8409	9.214957	CCTTATTATATGTGCAAAATAGACGGA	57.785	33.333	0.00	0.00	0.00	4.69
5989	8410	8.999431	ACCTTATTATATGTGCAAAATAGACGG	58.001	33.333	0.00	0.00	0.00	4.79
5998	8419	9.800433	CATTCACAAACCTTATTATATGTGCAA	57.200	29.630	0.00	0.00	38.37	4.08
5999	8420	8.965819	ACATTCACAAACCTTATTATATGTGCA	58.034	29.630	0.00	0.00	38.37	4.57
6000	8421	9.236691	CACATTCACAAACCTTATTATATGTGC	57.763	33.333	0.00	0.00	38.37	4.57
6001	8422	9.236691	GCACATTCACAAACCTTATTATATGTG	57.763	33.333	0.00	0.00	41.04	3.21

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.