Multiple sequence alignment - TraesCS5B01G028500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G028500 chr5B 100.000 4918 0 0 543 5460 27506047 27510964 0.000000e+00 9082.0
1 TraesCS5B01G028500 chr5B 100.000 276 0 0 1 276 27505505 27505780 1.360000e-140 510.0
2 TraesCS5B01G028500 chr5B 98.701 77 1 0 3900 3976 27509480 27509404 2.650000e-28 137.0
3 TraesCS5B01G028500 chr5D 90.930 3440 180 57 543 3901 36761188 36764576 0.000000e+00 4503.0
4 TraesCS5B01G028500 chr5D 92.458 1180 65 14 3973 5130 36764573 36765750 0.000000e+00 1664.0
5 TraesCS5B01G028500 chr5D 82.315 311 12 14 1 276 36760827 36761129 4.250000e-56 230.0
6 TraesCS5B01G028500 chr5D 91.000 100 7 2 5362 5460 36765768 36765866 3.430000e-27 134.0
7 TraesCS5B01G028500 chr5D 84.375 64 5 5 1186 1248 452560827 452560886 2.120000e-04 58.4
8 TraesCS5B01G028500 chr5A 93.698 1079 54 9 3973 5045 25890960 25892030 0.000000e+00 1604.0
9 TraesCS5B01G028500 chr5A 88.807 1358 67 34 543 1872 25887439 25888739 0.000000e+00 1587.0
10 TraesCS5B01G028500 chr5A 94.573 995 49 5 2291 3280 25889125 25890119 0.000000e+00 1533.0
11 TraesCS5B01G028500 chr5A 88.133 691 45 14 1273 1953 560884137 560883474 0.000000e+00 787.0
12 TraesCS5B01G028500 chr5A 94.819 386 18 1 1825 2210 25888739 25889122 7.830000e-168 601.0
13 TraesCS5B01G028500 chr5A 94.505 273 14 1 3630 3901 25890691 25890963 2.350000e-113 420.0
14 TraesCS5B01G028500 chr5A 84.783 368 28 8 2352 2714 554347670 554348014 1.460000e-90 344.0
15 TraesCS5B01G028500 chr5A 85.924 341 19 12 3291 3631 25890286 25890597 2.440000e-88 337.0
16 TraesCS5B01G028500 chr5A 83.696 368 32 7 2352 2714 560883337 560882993 6.820000e-84 322.0
17 TraesCS5B01G028500 chr5A 95.833 96 3 1 2864 2959 554348015 554348109 2.630000e-33 154.0
18 TraesCS5B01G028500 chr5A 78.033 305 10 23 1 273 25887106 25887385 7.370000e-29 139.0
19 TraesCS5B01G028500 chr5A 94.030 67 2 2 5128 5194 673548278 673548342 3.480000e-17 100.0
20 TraesCS5B01G028500 chr6B 86.742 973 78 16 999 1953 670366591 670367530 0.000000e+00 1035.0
21 TraesCS5B01G028500 chr6B 85.984 635 53 14 2328 2956 670367912 670368516 0.000000e+00 647.0
22 TraesCS5B01G028500 chr6B 85.135 666 54 15 876 1527 371123820 371124454 1.660000e-179 640.0
23 TraesCS5B01G028500 chr6B 90.312 320 26 4 1948 2264 670367608 670367925 1.090000e-111 414.0
24 TraesCS5B01G028500 chr6D 89.664 803 38 15 1170 1954 196357138 196357913 0.000000e+00 981.0
25 TraesCS5B01G028500 chr6D 85.326 368 26 7 2352 2714 196358049 196358393 6.730000e-94 355.0
26 TraesCS5B01G028500 chr6D 96.875 96 2 1 2864 2959 196358394 196358488 5.660000e-35 159.0
27 TraesCS5B01G028500 chr6D 95.000 80 4 0 3897 3976 402348194 402348115 5.740000e-25 126.0
28 TraesCS5B01G028500 chr6D 91.860 86 7 0 3891 3976 402348106 402348191 2.670000e-23 121.0
29 TraesCS5B01G028500 chr7A 88.537 820 46 19 1170 1971 724635749 724636538 0.000000e+00 950.0
30 TraesCS5B01G028500 chr7A 95.833 96 3 1 2864 2959 724636963 724637057 2.630000e-33 154.0
31 TraesCS5B01G028500 chr7A 95.000 80 4 0 3900 3979 104727410 104727489 5.740000e-25 126.0
32 TraesCS5B01G028500 chr7A 94.030 67 3 1 5131 5196 685390741 685390807 3.480000e-17 100.0
33 TraesCS5B01G028500 chr7A 92.754 69 5 0 5126 5194 723356055 723355987 3.480000e-17 100.0
34 TraesCS5B01G028500 chr7A 88.889 81 6 3 5110 5189 36143015 36143093 4.500000e-16 97.1
35 TraesCS5B01G028500 chr3A 88.653 802 45 16 1170 1953 50434749 50435522 0.000000e+00 935.0
36 TraesCS5B01G028500 chr3A 88.529 802 47 15 1170 1953 657438927 657439701 0.000000e+00 929.0
37 TraesCS5B01G028500 chr3A 84.783 368 28 7 2352 2714 657439837 657440181 1.460000e-90 344.0
38 TraesCS5B01G028500 chr3A 84.239 368 29 8 2352 2714 50435658 50436001 1.130000e-86 331.0
39 TraesCS5B01G028500 chr3A 91.111 90 6 2 3887 3976 650424758 650424845 2.670000e-23 121.0
40 TraesCS5B01G028500 chr1A 88.653 802 46 15 1170 1953 527084786 527084012 0.000000e+00 935.0
41 TraesCS5B01G028500 chr1A 84.511 368 29 14 2352 2714 527083876 527083532 6.770000e-89 339.0
42 TraesCS5B01G028500 chr6A 88.030 802 49 17 1170 1953 349779059 349779831 0.000000e+00 905.0
43 TraesCS5B01G028500 chr6A 87.671 803 53 14 1170 1953 508000090 508000865 0.000000e+00 893.0
44 TraesCS5B01G028500 chr6A 87.340 703 45 15 1170 1854 518947293 518947969 0.000000e+00 765.0
45 TraesCS5B01G028500 chr6A 83.696 368 32 7 2352 2714 349779968 349780312 6.820000e-84 322.0
46 TraesCS5B01G028500 chr6A 83.696 368 31 8 2352 2714 508001002 508001345 2.450000e-83 320.0
47 TraesCS5B01G028500 chr6A 83.424 368 31 8 2352 2714 518952541 518952883 1.140000e-81 315.0
48 TraesCS5B01G028500 chr6A 95.238 105 4 1 1849 1953 518952301 518952404 1.220000e-36 165.0
49 TraesCS5B01G028500 chr6A 95.833 96 3 1 2864 2959 508001346 508001440 2.630000e-33 154.0
50 TraesCS5B01G028500 chr6A 95.312 64 3 0 5133 5196 53448428 53448365 9.680000e-18 102.0
51 TraesCS5B01G028500 chr6A 92.754 69 5 0 5128 5196 104056694 104056626 3.480000e-17 100.0
52 TraesCS5B01G028500 chr6A 92.754 69 3 2 5128 5196 233960068 233960002 1.250000e-16 99.0
53 TraesCS5B01G028500 chr1B 84.903 669 55 16 1170 1819 552390555 552389914 7.720000e-178 634.0
54 TraesCS5B01G028500 chr1B 89.216 510 31 15 1772 2261 127645476 127645981 2.790000e-172 616.0
55 TraesCS5B01G028500 chr1B 85.375 506 53 9 876 1372 78426160 78425667 6.310000e-139 505.0
56 TraesCS5B01G028500 chr1B 88.496 226 21 3 876 1101 127645253 127645473 9.010000e-68 268.0
57 TraesCS5B01G028500 chr1B 89.744 195 17 3 2352 2543 127645990 127646184 4.220000e-61 246.0
58 TraesCS5B01G028500 chr7B 82.282 666 46 22 876 1527 630364458 630365065 1.360000e-140 510.0
59 TraesCS5B01G028500 chr2D 85.396 404 20 13 1170 1547 464808888 464808498 3.090000e-102 383.0
60 TraesCS5B01G028500 chr2D 89.960 249 21 2 1543 1787 464802875 464802627 8.830000e-83 318.0
61 TraesCS5B01G028500 chr2A 85.598 368 25 13 2352 2714 65084955 65085299 1.450000e-95 361.0
62 TraesCS5B01G028500 chr2A 83.424 368 33 7 2352 2714 94222246 94222590 3.170000e-82 316.0
63 TraesCS5B01G028500 chr2A 96.875 96 2 1 2864 2959 94222591 94222685 5.660000e-35 159.0
64 TraesCS5B01G028500 chr2A 95.833 96 3 1 2864 2959 65085300 65085394 2.630000e-33 154.0
65 TraesCS5B01G028500 chr2A 95.062 81 2 1 3899 3977 639713222 639713302 5.740000e-25 126.0
66 TraesCS5B01G028500 chr2A 94.366 71 2 2 5124 5194 278996453 278996385 2.080000e-19 108.0
67 TraesCS5B01G028500 chr2A 92.857 70 3 2 5126 5194 759451858 759451790 3.480000e-17 100.0
68 TraesCS5B01G028500 chr3B 84.553 369 28 8 2352 2714 61518769 61519114 6.770000e-89 339.0
69 TraesCS5B01G028500 chr4B 82.878 403 29 9 1139 1527 267075501 267075877 5.270000e-85 326.0
70 TraesCS5B01G028500 chrUn 95.181 83 2 2 3896 3976 23109983 23110065 4.440000e-26 130.0
71 TraesCS5B01G028500 chr1D 96.154 78 2 1 3899 3976 464312358 464312434 5.740000e-25 126.0
72 TraesCS5B01G028500 chr1D 96.104 77 2 1 3900 3976 464312434 464312359 2.070000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G028500 chr5B 27505505 27510964 5459 False 4796.000000 9082 100.000000 1 5460 2 chr5B.!!$F1 5459
1 TraesCS5B01G028500 chr5D 36760827 36765866 5039 False 1632.750000 4503 89.175750 1 5460 4 chr5D.!!$F2 5459
2 TraesCS5B01G028500 chr5A 25887106 25892030 4924 False 888.714286 1604 90.051286 1 5045 7 chr5A.!!$F2 5044
3 TraesCS5B01G028500 chr5A 560882993 560884137 1144 True 554.500000 787 85.914500 1273 2714 2 chr5A.!!$R1 1441
4 TraesCS5B01G028500 chr6B 670366591 670368516 1925 False 698.666667 1035 87.679333 999 2956 3 chr6B.!!$F2 1957
5 TraesCS5B01G028500 chr6B 371123820 371124454 634 False 640.000000 640 85.135000 876 1527 1 chr6B.!!$F1 651
6 TraesCS5B01G028500 chr6D 196357138 196358488 1350 False 498.333333 981 90.621667 1170 2959 3 chr6D.!!$F2 1789
7 TraesCS5B01G028500 chr7A 724635749 724637057 1308 False 552.000000 950 92.185000 1170 2959 2 chr7A.!!$F4 1789
8 TraesCS5B01G028500 chr3A 657438927 657440181 1254 False 636.500000 929 86.656000 1170 2714 2 chr3A.!!$F3 1544
9 TraesCS5B01G028500 chr3A 50434749 50436001 1252 False 633.000000 935 86.446000 1170 2714 2 chr3A.!!$F2 1544
10 TraesCS5B01G028500 chr1A 527083532 527084786 1254 True 637.000000 935 86.582000 1170 2714 2 chr1A.!!$R1 1544
11 TraesCS5B01G028500 chr6A 518947293 518947969 676 False 765.000000 765 87.340000 1170 1854 1 chr6A.!!$F1 684
12 TraesCS5B01G028500 chr6A 349779059 349780312 1253 False 613.500000 905 85.863000 1170 2714 2 chr6A.!!$F2 1544
13 TraesCS5B01G028500 chr6A 508000090 508001440 1350 False 455.666667 893 89.066667 1170 2959 3 chr6A.!!$F3 1789
14 TraesCS5B01G028500 chr6A 518952301 518952883 582 False 240.000000 315 89.331000 1849 2714 2 chr6A.!!$F4 865
15 TraesCS5B01G028500 chr1B 552389914 552390555 641 True 634.000000 634 84.903000 1170 1819 1 chr1B.!!$R2 649
16 TraesCS5B01G028500 chr1B 127645253 127646184 931 False 376.666667 616 89.152000 876 2543 3 chr1B.!!$F1 1667
17 TraesCS5B01G028500 chr7B 630364458 630365065 607 False 510.000000 510 82.282000 876 1527 1 chr7B.!!$F1 651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
191 224 0.030705 CCAATCCCTCTCTCTCCCCA 60.031 60.000 0.00 0.00 0.00 4.96 F
195 228 0.263172 TCCCTCTCTCTCCCCATCAC 59.737 60.000 0.00 0.00 0.00 3.06 F
197 230 0.264359 CCTCTCTCTCCCCATCACCT 59.736 60.000 0.00 0.00 0.00 4.00 F
747 787 0.603065 AAAACATCCCAGCTTTCGGC 59.397 50.000 0.00 0.00 42.19 5.54 F
1440 1522 0.105778 TGACACATGTGAAGCACGGA 59.894 50.000 31.94 3.66 37.14 4.69 F
2359 2586 1.134877 GGTCCCTTACGGTTCTAGCAC 60.135 57.143 0.00 0.00 0.00 4.40 F
3901 4390 0.246635 TGGCTCGCCTTCTCAAGTAC 59.753 55.000 9.65 0.00 36.94 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1425 1507 0.179059 TGTGTCCGTGCTTCACATGT 60.179 50.000 0.00 0.00 37.20 3.21 R
1428 1510 0.884259 CCATGTGTCCGTGCTTCACA 60.884 55.000 0.00 0.00 44.29 3.58 R
1438 1520 0.962356 CTGAACCCAGCCATGTGTCC 60.962 60.000 0.00 0.00 33.07 4.02 R
2536 2767 1.108776 GTCATGCCATGGCTGAACAT 58.891 50.000 35.53 18.84 42.51 2.71 R
3031 3264 1.807142 CCGAAAGAGTGGGAAAAGCTC 59.193 52.381 0.00 0.00 0.00 4.09 R
4207 4696 0.252479 AACTGAGAGATGCAGCTGGG 59.748 55.000 10.40 0.00 36.86 4.45 R
4739 5237 0.319211 CTGCTACCACGAAACGGTCA 60.319 55.000 0.00 0.00 37.99 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.777832 TTTGGGCTTTGCAGTTTTGT 57.222 40.000 0.00 0.00 0.00 2.83
35 36 1.068434 TGGGCTTTGCAGTTTTGTAGC 59.932 47.619 0.00 0.00 0.00 3.58
47 53 5.706916 CAGTTTTGTAGCGAAGGAGTAGTA 58.293 41.667 0.00 0.00 0.00 1.82
48 54 6.154445 CAGTTTTGTAGCGAAGGAGTAGTAA 58.846 40.000 0.00 0.00 0.00 2.24
84 90 2.381445 AGCTTTAGGTGGAGCTGCT 58.619 52.632 6.82 0.00 46.82 4.24
86 92 1.028868 GCTTTAGGTGGAGCTGCTGG 61.029 60.000 7.01 0.00 36.01 4.85
87 93 0.393537 CTTTAGGTGGAGCTGCTGGG 60.394 60.000 7.01 0.00 0.00 4.45
89 95 2.763988 TTAGGTGGAGCTGCTGGGGA 62.764 60.000 7.01 0.00 0.00 4.81
91 97 2.045536 GTGGAGCTGCTGGGGAAG 60.046 66.667 7.01 0.00 0.00 3.46
92 98 3.333219 TGGAGCTGCTGGGGAAGG 61.333 66.667 7.01 0.00 0.00 3.46
93 99 3.011517 GGAGCTGCTGGGGAAGGA 61.012 66.667 7.01 0.00 0.00 3.36
94 100 2.588989 GAGCTGCTGGGGAAGGAG 59.411 66.667 7.01 0.00 46.72 3.69
95 101 3.013932 AGCTGCTGGGGAAGGAGG 61.014 66.667 0.00 0.00 44.27 4.30
96 102 3.011517 GCTGCTGGGGAAGGAGGA 61.012 66.667 0.00 0.00 44.27 3.71
97 103 2.606587 GCTGCTGGGGAAGGAGGAA 61.607 63.158 0.00 0.00 44.27 3.36
98 104 1.606531 CTGCTGGGGAAGGAGGAAG 59.393 63.158 0.00 0.00 40.55 3.46
191 224 0.030705 CCAATCCCTCTCTCTCCCCA 60.031 60.000 0.00 0.00 0.00 4.96
192 225 1.415716 CCAATCCCTCTCTCTCCCCAT 60.416 57.143 0.00 0.00 0.00 4.00
193 226 1.977129 CAATCCCTCTCTCTCCCCATC 59.023 57.143 0.00 0.00 0.00 3.51
194 227 1.249195 ATCCCTCTCTCTCCCCATCA 58.751 55.000 0.00 0.00 0.00 3.07
195 228 0.263172 TCCCTCTCTCTCCCCATCAC 59.737 60.000 0.00 0.00 0.00 3.06
197 230 0.264359 CCTCTCTCTCCCCATCACCT 59.736 60.000 0.00 0.00 0.00 4.00
204 244 2.124983 CCCCATCACCTCACAGCG 60.125 66.667 0.00 0.00 0.00 5.18
235 275 1.375140 CTCATCCGCCCCATCATCG 60.375 63.158 0.00 0.00 0.00 3.84
273 313 2.027625 CGTGAGTGGCCTTCGGTTC 61.028 63.158 3.32 0.00 0.00 3.62
275 315 1.841556 TGAGTGGCCTTCGGTTCCT 60.842 57.895 3.32 0.00 0.00 3.36
610 650 3.853330 CGCACATTCACGGGCTCG 61.853 66.667 3.27 3.27 43.02 5.03
611 651 4.166011 GCACATTCACGGGCTCGC 62.166 66.667 5.51 0.00 40.63 5.03
630 670 2.442413 CTTGAAAGCCCCCTGCCT 59.558 61.111 0.00 0.00 42.71 4.75
631 671 1.680314 CTTGAAAGCCCCCTGCCTC 60.680 63.158 0.00 0.00 42.71 4.70
700 740 4.266714 CCGTGGATTTTGGGTACTGTAAT 58.733 43.478 0.00 0.00 0.00 1.89
701 741 5.430007 CCGTGGATTTTGGGTACTGTAATA 58.570 41.667 0.00 0.00 0.00 0.98
702 742 5.881443 CCGTGGATTTTGGGTACTGTAATAA 59.119 40.000 0.00 0.00 0.00 1.40
703 743 6.374894 CCGTGGATTTTGGGTACTGTAATAAA 59.625 38.462 0.00 0.00 0.00 1.40
707 747 9.762381 TGGATTTTGGGTACTGTAATAAATCTT 57.238 29.630 16.22 0.00 33.36 2.40
721 761 8.450964 TGTAATAAATCTTCTTTTCTGCTTCCG 58.549 33.333 0.00 0.00 0.00 4.30
747 787 0.603065 AAAACATCCCAGCTTTCGGC 59.397 50.000 0.00 0.00 42.19 5.54
769 809 1.668628 CGGTTCTTGGGGAATTTTGCG 60.669 52.381 0.00 0.00 36.24 4.85
780 820 1.061276 GAATTTTGCGCTCTCTCGGTC 59.939 52.381 9.73 0.00 0.00 4.79
781 821 0.741221 ATTTTGCGCTCTCTCGGTCC 60.741 55.000 9.73 0.00 0.00 4.46
782 822 3.626680 TTTGCGCTCTCTCGGTCCG 62.627 63.158 9.73 4.39 0.00 4.79
807 847 2.225491 TCTTGATTCGCTCCGGTTTTTG 59.775 45.455 0.00 0.00 0.00 2.44
810 850 2.817258 TGATTCGCTCCGGTTTTTGATT 59.183 40.909 0.00 0.00 0.00 2.57
816 856 4.450955 CGGTTTTTGATTCCGGCG 57.549 55.556 0.00 0.00 40.49 6.46
817 857 1.870383 CGGTTTTTGATTCCGGCGA 59.130 52.632 9.30 0.00 40.49 5.54
831 893 3.134127 GCGACCTGCATTCCCCAC 61.134 66.667 0.00 0.00 45.45 4.61
860 922 6.088616 CCGCATTCTGTTTCTGAAGATTTTTC 59.911 38.462 0.00 0.00 0.00 2.29
862 924 7.149015 CGCATTCTGTTTCTGAAGATTTTTCTG 60.149 37.037 0.00 0.00 0.00 3.02
874 936 0.673437 TTTTTCTGCGCCCCTCTTTG 59.327 50.000 4.18 0.00 0.00 2.77
887 949 2.202518 CTTTGGCGGCAATCTGCG 60.203 61.111 26.07 8.00 46.21 5.18
909 971 5.258622 CGCTTCTGTTTCTGATTTAATCGG 58.741 41.667 7.42 7.42 36.99 4.18
931 993 3.812053 GTGCTCAGTCTCAATCTGTGTTT 59.188 43.478 0.00 0.00 34.86 2.83
932 994 3.811497 TGCTCAGTCTCAATCTGTGTTTG 59.189 43.478 0.00 0.00 34.86 2.93
933 995 3.364764 GCTCAGTCTCAATCTGTGTTTGC 60.365 47.826 0.00 0.00 34.86 3.68
935 997 4.454678 TCAGTCTCAATCTGTGTTTGCTT 58.545 39.130 0.00 0.00 34.86 3.91
936 998 4.274214 TCAGTCTCAATCTGTGTTTGCTTG 59.726 41.667 0.00 0.00 34.86 4.01
937 999 4.036027 CAGTCTCAATCTGTGTTTGCTTGT 59.964 41.667 0.00 0.00 0.00 3.16
938 1000 4.641989 AGTCTCAATCTGTGTTTGCTTGTT 59.358 37.500 0.00 0.00 0.00 2.83
1029 1093 0.698238 TCAAGAACCACCATGAGGGG 59.302 55.000 8.71 5.20 42.91 4.79
1330 1403 2.267324 GTGAGGCTGCTCTGTCCC 59.733 66.667 0.00 0.00 0.00 4.46
1331 1404 3.005539 TGAGGCTGCTCTGTCCCC 61.006 66.667 0.00 0.00 0.00 4.81
1332 1405 3.005539 GAGGCTGCTCTGTCCCCA 61.006 66.667 0.00 0.00 0.00 4.96
1333 1406 2.285969 AGGCTGCTCTGTCCCCAT 60.286 61.111 0.00 0.00 0.00 4.00
1334 1407 2.191641 GGCTGCTCTGTCCCCATC 59.808 66.667 0.00 0.00 0.00 3.51
1335 1408 2.191641 GCTGCTCTGTCCCCATCC 59.808 66.667 0.00 0.00 0.00 3.51
1336 1409 2.373707 GCTGCTCTGTCCCCATCCT 61.374 63.158 0.00 0.00 0.00 3.24
1372 1448 1.197721 GTTTTGTGGCGTGAGATGAGG 59.802 52.381 0.00 0.00 0.00 3.86
1373 1449 0.955428 TTTGTGGCGTGAGATGAGGC 60.955 55.000 0.00 0.00 0.00 4.70
1376 1452 2.894387 GGCGTGAGATGAGGCTGC 60.894 66.667 0.00 0.00 0.00 5.25
1378 1454 1.882167 GCGTGAGATGAGGCTGCTC 60.882 63.158 0.00 0.00 0.00 4.26
1379 1455 1.815196 CGTGAGATGAGGCTGCTCT 59.185 57.895 0.00 0.00 0.00 4.09
1381 1457 1.268999 CGTGAGATGAGGCTGCTCTAC 60.269 57.143 0.00 0.00 0.00 2.59
1382 1458 2.031120 GTGAGATGAGGCTGCTCTACT 58.969 52.381 0.00 0.06 0.00 2.57
1424 1506 6.926313 AGAAAAGAGTAGATAGTGGTGTGAC 58.074 40.000 0.00 0.00 0.00 3.67
1425 1507 6.493802 AGAAAAGAGTAGATAGTGGTGTGACA 59.506 38.462 0.00 0.00 0.00 3.58
1426 1508 5.646577 AAGAGTAGATAGTGGTGTGACAC 57.353 43.478 7.29 7.29 41.63 3.67
1427 1509 4.663334 AGAGTAGATAGTGGTGTGACACA 58.337 43.478 18.40 3.56 43.72 3.72
1428 1510 5.265191 AGAGTAGATAGTGGTGTGACACAT 58.735 41.667 18.40 1.72 43.72 3.21
1429 1511 5.126222 AGAGTAGATAGTGGTGTGACACATG 59.874 44.000 18.40 0.00 43.72 3.21
1430 1512 4.772624 AGTAGATAGTGGTGTGACACATGT 59.227 41.667 18.40 3.49 43.72 3.21
1431 1513 3.930336 AGATAGTGGTGTGACACATGTG 58.070 45.455 24.25 24.25 43.72 3.21
1432 1514 3.578282 AGATAGTGGTGTGACACATGTGA 59.422 43.478 31.94 8.09 43.72 3.58
1433 1515 2.708216 AGTGGTGTGACACATGTGAA 57.292 45.000 31.94 16.50 43.72 3.18
1434 1516 2.564771 AGTGGTGTGACACATGTGAAG 58.435 47.619 31.94 6.47 43.72 3.02
1435 1517 1.002468 GTGGTGTGACACATGTGAAGC 60.002 52.381 31.94 20.96 40.99 3.86
1436 1518 1.308047 GGTGTGACACATGTGAAGCA 58.692 50.000 31.94 21.51 35.86 3.91
1437 1519 1.002468 GGTGTGACACATGTGAAGCAC 60.002 52.381 31.94 29.37 35.86 4.40
1438 1520 0.936600 TGTGACACATGTGAAGCACG 59.063 50.000 31.94 4.05 37.14 5.34
1439 1521 0.235665 GTGACACATGTGAAGCACGG 59.764 55.000 31.94 3.25 37.14 4.94
1440 1522 0.105778 TGACACATGTGAAGCACGGA 59.894 50.000 31.94 3.66 37.14 4.69
1531 1614 7.437862 CAGTACAAATTTGGCAATGTTTGTAGT 59.562 33.333 30.75 30.23 44.87 2.73
1578 1661 6.322712 AGTTCTAGGAGAGCTTAGGTAATGTG 59.677 42.308 0.00 0.00 31.40 3.21
1604 1691 2.747446 GCACATAGTAGGGTGGTGTTTG 59.253 50.000 6.82 0.00 35.58 2.93
1612 1699 1.141053 AGGGTGGTGTTTGTCTCAGAC 59.859 52.381 0.00 0.00 0.00 3.51
1723 1810 6.933521 TGTTAGTAGAAACGAGTAGAGAGTGT 59.066 38.462 0.00 0.00 31.76 3.55
1858 1947 7.824779 GGTGTTGTTCAGAGAAAGGTAGATAAT 59.175 37.037 0.00 0.00 0.00 1.28
2031 2258 8.207545 AGGGTAATTTTTAACAAATCTTGCACA 58.792 29.630 0.00 0.00 0.00 4.57
2137 2364 7.039504 GGTCTTATGTGGATGCCATTATTCATT 60.040 37.037 0.00 0.00 35.28 2.57
2152 2379 9.820725 CCATTATTCATTGACACCATTTACATT 57.179 29.630 0.00 0.00 0.00 2.71
2314 2541 5.468658 AGCCTGTGACCTTCCTACTTATAT 58.531 41.667 0.00 0.00 0.00 0.86
2331 2558 9.921637 CTACTTATATCCCTTGAGCTCTTTTAG 57.078 37.037 16.19 6.97 0.00 1.85
2342 2569 7.065204 CCTTGAGCTCTTTTAGATTTACTGGTC 59.935 40.741 16.19 0.00 0.00 4.02
2359 2586 1.134877 GGTCCCTTACGGTTCTAGCAC 60.135 57.143 0.00 0.00 0.00 4.40
2363 2590 2.000447 CCTTACGGTTCTAGCACAAGC 59.000 52.381 0.00 0.00 42.56 4.01
2458 2688 7.760131 TTTGCTGTTTCTGAAATGAGAAAAG 57.240 32.000 6.06 0.00 42.27 2.27
2477 2707 1.846439 AGCACCCCAGCACATAACTAT 59.154 47.619 0.00 0.00 36.85 2.12
2485 2715 5.300752 CCCAGCACATAACTATTCTGTAGG 58.699 45.833 0.00 0.00 0.00 3.18
2489 2719 5.104941 AGCACATAACTATTCTGTAGGCACA 60.105 40.000 0.00 0.00 0.00 4.57
2636 2867 9.921637 ATAGATTCGATCCTTCTGAAACTTATC 57.078 33.333 0.00 0.00 0.00 1.75
2675 2907 8.959548 ACACAGAAACTTATGCATTTGATATGA 58.040 29.630 3.54 0.00 0.00 2.15
2768 3000 3.969117 ATGTAATGCCATGTAAGCGTG 57.031 42.857 0.00 0.00 0.00 5.34
2778 3010 3.308053 CCATGTAAGCGTGTCAATGAGAG 59.692 47.826 0.00 0.00 0.00 3.20
2853 3086 5.244851 TCTCTCTAGCAACTTGAATGACTGT 59.755 40.000 0.00 0.00 0.00 3.55
2856 3089 2.838736 AGCAACTTGAATGACTGTCGT 58.161 42.857 2.98 0.00 0.00 4.34
2861 3094 5.565259 GCAACTTGAATGACTGTCGTATTTG 59.435 40.000 2.42 0.81 0.00 2.32
2989 3222 2.074576 CTGCAGTCACCATTCACAGAG 58.925 52.381 5.25 0.00 0.00 3.35
3147 3380 8.637986 ACAGTTACAAATGCCTTTCTGAATTTA 58.362 29.630 7.55 0.00 0.00 1.40
3180 3414 5.819379 TGAGTTCATCAATGCCTTCTGATAC 59.181 40.000 0.00 0.00 34.02 2.24
3282 3516 5.861251 TGTGCATTTAGTTTTTAATGAGCCG 59.139 36.000 0.00 0.00 34.44 5.52
3301 3691 7.591165 TGAGCCGTATATATGTACAGAACTTC 58.409 38.462 9.90 0.57 0.00 3.01
3355 3745 5.592282 TGAACAATCTAGCACAAAGTTTCCA 59.408 36.000 0.00 0.00 0.00 3.53
3417 3807 3.969117 TTCTGAACATGAAGTGTGTGC 57.031 42.857 0.00 0.00 41.14 4.57
3422 3812 3.884693 TGAACATGAAGTGTGTGCTTGAT 59.115 39.130 0.00 0.00 41.14 2.57
3488 3878 8.975410 TCTCAATAAGCAACAAATGAAATCTG 57.025 30.769 0.00 0.00 0.00 2.90
3523 3916 6.604735 ACACTGAGTACAAAGTGAACATTC 57.395 37.500 25.97 0.17 45.43 2.67
3526 3919 6.479990 CACTGAGTACAAAGTGAACATTCTCA 59.520 38.462 18.36 0.00 45.43 3.27
3530 3923 6.729187 AGTACAAAGTGAACATTCTCAAAGC 58.271 36.000 0.00 0.00 0.00 3.51
3531 3924 5.581126 ACAAAGTGAACATTCTCAAAGCA 57.419 34.783 0.00 0.00 0.00 3.91
3597 3990 3.264450 CAGGAAAGTGTTCTGGGGTATCT 59.736 47.826 0.00 0.00 33.92 1.98
3660 4148 8.635765 TTATCTTTGAGTTTGTAAGCCTGAAT 57.364 30.769 0.00 0.00 0.00 2.57
3901 4390 0.246635 TGGCTCGCCTTCTCAAGTAC 59.753 55.000 9.65 0.00 36.94 2.73
3902 4391 0.533032 GGCTCGCCTTCTCAAGTACT 59.467 55.000 0.00 0.00 0.00 2.73
3903 4392 1.470112 GGCTCGCCTTCTCAAGTACTC 60.470 57.143 0.00 0.00 0.00 2.59
3904 4393 1.470112 GCTCGCCTTCTCAAGTACTCC 60.470 57.143 0.00 0.00 0.00 3.85
3905 4394 1.135333 CTCGCCTTCTCAAGTACTCCC 59.865 57.143 0.00 0.00 0.00 4.30
3906 4395 1.187087 CGCCTTCTCAAGTACTCCCT 58.813 55.000 0.00 0.00 0.00 4.20
3907 4396 1.135333 CGCCTTCTCAAGTACTCCCTC 59.865 57.143 0.00 0.00 0.00 4.30
3908 4397 1.483004 GCCTTCTCAAGTACTCCCTCC 59.517 57.143 0.00 0.00 0.00 4.30
3909 4398 1.751924 CCTTCTCAAGTACTCCCTCCG 59.248 57.143 0.00 0.00 0.00 4.63
3910 4399 2.448453 CTTCTCAAGTACTCCCTCCGT 58.552 52.381 0.00 0.00 0.00 4.69
3911 4400 2.599408 TCTCAAGTACTCCCTCCGTT 57.401 50.000 0.00 0.00 0.00 4.44
3912 4401 2.444421 TCTCAAGTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 0.00 3.95
3913 4402 1.477295 CTCAAGTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 0.00 3.62
3914 4403 1.203087 TCAAGTACTCCCTCCGTTCCA 60.203 52.381 0.00 0.00 0.00 3.53
3915 4404 1.621814 CAAGTACTCCCTCCGTTCCAA 59.378 52.381 0.00 0.00 0.00 3.53
3916 4405 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
3917 4406 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
3918 4407 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
3919 4408 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
3920 4409 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3921 4410 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3922 4411 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3923 4412 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3924 4413 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3925 4414 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3926 4415 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3927 4416 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3928 4417 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3929 4418 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3930 4419 5.874810 TCCGTTCCAAAATAGATGACTCAAG 59.125 40.000 0.00 0.00 0.00 3.02
3931 4420 5.643777 CCGTTCCAAAATAGATGACTCAAGT 59.356 40.000 0.00 0.00 0.00 3.16
3932 4421 6.149474 CCGTTCCAAAATAGATGACTCAAGTT 59.851 38.462 0.00 0.00 0.00 2.66
3933 4422 7.308589 CCGTTCCAAAATAGATGACTCAAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
3934 4423 7.535258 CGTTCCAAAATAGATGACTCAAGTTTG 59.465 37.037 0.00 0.00 0.00 2.93
3935 4424 8.352942 GTTCCAAAATAGATGACTCAAGTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3936 4425 9.567776 TTCCAAAATAGATGACTCAAGTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3937 4426 8.999431 TCCAAAATAGATGACTCAAGTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
3938 4427 9.003658 CCAAAATAGATGACTCAAGTTTGTACT 57.996 33.333 0.00 0.00 35.68 2.73
3962 4451 9.003658 ACTACAAACTTGAGTCATCTATTTTGG 57.996 33.333 9.57 0.00 36.13 3.28
3963 4452 9.219603 CTACAAACTTGAGTCATCTATTTTGGA 57.780 33.333 9.57 2.58 36.13 3.53
3964 4453 8.463930 ACAAACTTGAGTCATCTATTTTGGAA 57.536 30.769 9.57 0.00 36.13 3.53
3965 4454 8.352942 ACAAACTTGAGTCATCTATTTTGGAAC 58.647 33.333 9.57 0.00 36.13 3.62
3966 4455 6.727824 ACTTGAGTCATCTATTTTGGAACG 57.272 37.500 0.00 0.00 0.00 3.95
3967 4456 5.643777 ACTTGAGTCATCTATTTTGGAACGG 59.356 40.000 0.00 0.00 0.00 4.44
3968 4457 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
3969 4458 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3970 4459 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3971 4460 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3972 4461 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3973 4462 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3974 4463 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
3975 4464 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
3976 4465 4.966805 TCTATTTTGGAACGGAGGGAGTAT 59.033 41.667 0.00 0.00 0.00 2.12
3977 4466 6.138263 TCTATTTTGGAACGGAGGGAGTATA 58.862 40.000 0.00 0.00 0.00 1.47
3984 4473 4.439968 GAACGGAGGGAGTATAAAACAGG 58.560 47.826 0.00 0.00 0.00 4.00
4188 4677 4.802051 TGGGAGCAAGGCGATGGC 62.802 66.667 0.00 0.00 38.90 4.40
4298 4787 1.376553 GGCTCAGAGGTGACAAGCC 60.377 63.158 0.00 0.00 35.16 4.35
4324 4813 4.783560 TGATCATGAAGATGTGGACCAT 57.216 40.909 0.00 0.00 37.00 3.55
4387 4876 2.969238 CCGAGCATCATGGACGGC 60.969 66.667 0.00 0.00 37.32 5.68
4476 4965 2.928396 ACTTGAGGGGGTGACGGG 60.928 66.667 0.00 0.00 0.00 5.28
4551 5040 3.406200 CTCCAGGGCAGGGGTCTG 61.406 72.222 0.00 0.00 43.64 3.51
4552 5041 4.270153 TCCAGGGCAGGGGTCTGT 62.270 66.667 0.00 0.00 42.78 3.41
4553 5042 3.721706 CCAGGGCAGGGGTCTGTC 61.722 72.222 0.00 0.00 44.45 3.51
4576 5070 2.887568 CGTCATCTGGCTGTCCGC 60.888 66.667 0.00 0.00 38.13 5.54
4663 5157 3.244249 ACTTCAGTGCTAGTTTCCAGGAC 60.244 47.826 0.00 0.00 34.82 3.85
4696 5190 1.182667 GAACACCCCCTTTGCCATAC 58.817 55.000 0.00 0.00 0.00 2.39
4739 5237 1.211212 TGCTGCTTGCTACCATCATCT 59.789 47.619 0.00 0.00 43.37 2.90
4750 5248 1.275291 ACCATCATCTGACCGTTTCGT 59.725 47.619 0.00 0.00 0.00 3.85
4769 5267 3.810941 TCGTGGTAGCAGGTTTAAGTTTG 59.189 43.478 13.74 0.00 0.00 2.93
4819 5317 5.046520 AGACTAGTTGGAATGGTACTGGAAC 60.047 44.000 0.00 0.00 0.00 3.62
4921 5420 1.322442 AGTTGGCTTGAAGGTTCTGC 58.678 50.000 0.00 0.00 0.00 4.26
4938 5450 2.159014 TCTGCGTGTAGACTTGGTTTGT 60.159 45.455 0.00 0.00 0.00 2.83
4940 5452 3.011119 TGCGTGTAGACTTGGTTTGTTT 58.989 40.909 0.00 0.00 0.00 2.83
4941 5453 3.181505 TGCGTGTAGACTTGGTTTGTTTG 60.182 43.478 0.00 0.00 0.00 2.93
4942 5454 3.181504 GCGTGTAGACTTGGTTTGTTTGT 60.182 43.478 0.00 0.00 0.00 2.83
4943 5455 4.034279 GCGTGTAGACTTGGTTTGTTTGTA 59.966 41.667 0.00 0.00 0.00 2.41
4944 5456 5.495502 CGTGTAGACTTGGTTTGTTTGTAC 58.504 41.667 0.00 0.00 0.00 2.90
4945 5457 5.292589 CGTGTAGACTTGGTTTGTTTGTACT 59.707 40.000 0.00 0.00 0.00 2.73
4946 5458 6.509039 CGTGTAGACTTGGTTTGTTTGTACTC 60.509 42.308 0.00 0.00 0.00 2.59
4947 5459 6.537660 GTGTAGACTTGGTTTGTTTGTACTCT 59.462 38.462 0.00 0.00 0.00 3.24
4948 5460 6.537301 TGTAGACTTGGTTTGTTTGTACTCTG 59.463 38.462 0.00 0.00 0.00 3.35
4949 5461 4.881850 AGACTTGGTTTGTTTGTACTCTGG 59.118 41.667 0.00 0.00 0.00 3.86
4950 5462 4.595986 ACTTGGTTTGTTTGTACTCTGGT 58.404 39.130 0.00 0.00 0.00 4.00
4951 5463 4.398044 ACTTGGTTTGTTTGTACTCTGGTG 59.602 41.667 0.00 0.00 0.00 4.17
4952 5464 3.958018 TGGTTTGTTTGTACTCTGGTGT 58.042 40.909 0.00 0.00 0.00 4.16
4953 5465 4.337145 TGGTTTGTTTGTACTCTGGTGTT 58.663 39.130 0.00 0.00 0.00 3.32
4978 5490 7.667043 TTAACACCTGAATTCAGTGATGTAC 57.333 36.000 29.03 0.00 42.27 2.90
5003 5515 3.123050 GACTTGGCATGGTTTGTGAAAC 58.877 45.455 5.31 0.00 40.65 2.78
5013 5525 5.843673 TGGTTTGTGAAACTCTTTATGCA 57.156 34.783 0.00 0.00 41.14 3.96
5014 5526 6.403866 TGGTTTGTGAAACTCTTTATGCAT 57.596 33.333 3.79 3.79 41.14 3.96
5026 5570 7.100458 ACTCTTTATGCATGGTAAATTCCAC 57.900 36.000 10.16 0.00 40.51 4.02
5110 5654 6.265577 ACTCGAGGAAAGTGAATTTGTTTTG 58.734 36.000 18.41 0.00 0.00 2.44
5116 5660 5.177511 GGAAAGTGAATTTGTTTTGGCTAGC 59.822 40.000 6.04 6.04 0.00 3.42
5130 5674 7.609918 TGTTTTGGCTAGCTCTTTGTGATATAA 59.390 33.333 15.72 0.00 0.00 0.98
5132 5676 8.752005 TTTGGCTAGCTCTTTGTGATATAAAT 57.248 30.769 15.72 0.00 0.00 1.40
5133 5677 9.845740 TTTGGCTAGCTCTTTGTGATATAAATA 57.154 29.630 15.72 0.00 0.00 1.40
5135 5679 8.651389 TGGCTAGCTCTTTGTGATATAAATAGT 58.349 33.333 15.72 0.00 0.00 2.12
5178 5722 7.651808 ACATTAAGATGTGCCATAAGTATTGC 58.348 34.615 0.00 0.00 44.64 3.56
5179 5723 7.285172 ACATTAAGATGTGCCATAAGTATTGCA 59.715 33.333 0.00 0.00 44.64 4.08
5187 5731 6.866010 TGCCATAAGTATTGCACATCTAAG 57.134 37.500 0.00 0.00 30.49 2.18
5188 5732 6.356556 TGCCATAAGTATTGCACATCTAAGT 58.643 36.000 0.00 0.00 30.49 2.24
5189 5733 6.483307 TGCCATAAGTATTGCACATCTAAGTC 59.517 38.462 0.00 0.00 30.49 3.01
5190 5734 6.483307 GCCATAAGTATTGCACATCTAAGTCA 59.517 38.462 0.00 0.00 0.00 3.41
5191 5735 7.173907 GCCATAAGTATTGCACATCTAAGTCAT 59.826 37.037 0.00 0.00 0.00 3.06
5192 5736 9.710900 CCATAAGTATTGCACATCTAAGTCATA 57.289 33.333 0.00 0.00 0.00 2.15
5200 5744 7.873739 TGCACATCTAAGTCATATATTCGTG 57.126 36.000 0.00 0.00 0.00 4.35
5201 5745 7.433680 TGCACATCTAAGTCATATATTCGTGT 58.566 34.615 0.00 0.00 0.00 4.49
5202 5746 7.382218 TGCACATCTAAGTCATATATTCGTGTG 59.618 37.037 0.00 0.00 36.19 3.82
5203 5747 7.148738 GCACATCTAAGTCATATATTCGTGTGG 60.149 40.741 0.00 0.00 34.33 4.17
5204 5748 7.329471 CACATCTAAGTCATATATTCGTGTGGG 59.671 40.741 0.00 0.00 0.00 4.61
5205 5749 6.971726 TCTAAGTCATATATTCGTGTGGGT 57.028 37.500 0.00 0.00 0.00 4.51
5206 5750 8.520351 CATCTAAGTCATATATTCGTGTGGGTA 58.480 37.037 0.00 0.00 0.00 3.69
5207 5751 7.879070 TCTAAGTCATATATTCGTGTGGGTAC 58.121 38.462 0.00 0.00 0.00 3.34
5208 5752 6.726490 AAGTCATATATTCGTGTGGGTACT 57.274 37.500 0.00 0.00 0.00 2.73
5209 5753 6.726490 AGTCATATATTCGTGTGGGTACTT 57.274 37.500 0.00 0.00 0.00 2.24
5210 5754 6.746120 AGTCATATATTCGTGTGGGTACTTC 58.254 40.000 0.00 0.00 0.00 3.01
5211 5755 5.924825 GTCATATATTCGTGTGGGTACTTCC 59.075 44.000 0.00 0.00 0.00 3.46
5212 5756 5.836898 TCATATATTCGTGTGGGTACTTCCT 59.163 40.000 0.00 0.00 36.25 3.36
5213 5757 6.325545 TCATATATTCGTGTGGGTACTTCCTT 59.674 38.462 0.00 0.00 36.25 3.36
5214 5758 3.782656 ATTCGTGTGGGTACTTCCTTT 57.217 42.857 0.00 0.00 36.25 3.11
5215 5759 3.564053 TTCGTGTGGGTACTTCCTTTT 57.436 42.857 0.00 0.00 36.25 2.27
5216 5760 3.564053 TCGTGTGGGTACTTCCTTTTT 57.436 42.857 0.00 0.00 36.25 1.94
5241 5785 9.612066 TTTTCTTTTCATTTTTCCTGTTATGCT 57.388 25.926 0.00 0.00 0.00 3.79
5242 5786 9.612066 TTTCTTTTCATTTTTCCTGTTATGCTT 57.388 25.926 0.00 0.00 0.00 3.91
5243 5787 8.592105 TCTTTTCATTTTTCCTGTTATGCTTG 57.408 30.769 0.00 0.00 0.00 4.01
5244 5788 8.420222 TCTTTTCATTTTTCCTGTTATGCTTGA 58.580 29.630 0.00 0.00 0.00 3.02
5245 5789 9.211485 CTTTTCATTTTTCCTGTTATGCTTGAT 57.789 29.630 0.00 0.00 0.00 2.57
5246 5790 9.558396 TTTTCATTTTTCCTGTTATGCTTGATT 57.442 25.926 0.00 0.00 0.00 2.57
5247 5791 8.537049 TTCATTTTTCCTGTTATGCTTGATTG 57.463 30.769 0.00 0.00 0.00 2.67
5248 5792 7.894708 TCATTTTTCCTGTTATGCTTGATTGA 58.105 30.769 0.00 0.00 0.00 2.57
5249 5793 7.814107 TCATTTTTCCTGTTATGCTTGATTGAC 59.186 33.333 0.00 0.00 0.00 3.18
5250 5794 6.899393 TTTTCCTGTTATGCTTGATTGACT 57.101 33.333 0.00 0.00 0.00 3.41
5251 5795 6.899393 TTTCCTGTTATGCTTGATTGACTT 57.101 33.333 0.00 0.00 0.00 3.01
5252 5796 5.885230 TCCTGTTATGCTTGATTGACTTG 57.115 39.130 0.00 0.00 0.00 3.16
5253 5797 5.559770 TCCTGTTATGCTTGATTGACTTGA 58.440 37.500 0.00 0.00 0.00 3.02
5254 5798 5.645067 TCCTGTTATGCTTGATTGACTTGAG 59.355 40.000 0.00 0.00 0.00 3.02
5255 5799 5.645067 CCTGTTATGCTTGATTGACTTGAGA 59.355 40.000 0.00 0.00 0.00 3.27
5256 5800 6.318144 CCTGTTATGCTTGATTGACTTGAGAT 59.682 38.462 0.00 0.00 0.00 2.75
5257 5801 7.148120 CCTGTTATGCTTGATTGACTTGAGATT 60.148 37.037 0.00 0.00 0.00 2.40
5258 5802 8.114331 TGTTATGCTTGATTGACTTGAGATTT 57.886 30.769 0.00 0.00 0.00 2.17
5259 5803 8.024865 TGTTATGCTTGATTGACTTGAGATTTG 58.975 33.333 0.00 0.00 0.00 2.32
5260 5804 6.585695 ATGCTTGATTGACTTGAGATTTGT 57.414 33.333 0.00 0.00 0.00 2.83
5261 5805 5.765176 TGCTTGATTGACTTGAGATTTGTG 58.235 37.500 0.00 0.00 0.00 3.33
5262 5806 5.300034 TGCTTGATTGACTTGAGATTTGTGT 59.700 36.000 0.00 0.00 0.00 3.72
5263 5807 5.628193 GCTTGATTGACTTGAGATTTGTGTG 59.372 40.000 0.00 0.00 0.00 3.82
5264 5808 5.694231 TGATTGACTTGAGATTTGTGTGG 57.306 39.130 0.00 0.00 0.00 4.17
5265 5809 4.520111 TGATTGACTTGAGATTTGTGTGGG 59.480 41.667 0.00 0.00 0.00 4.61
5266 5810 3.576078 TGACTTGAGATTTGTGTGGGT 57.424 42.857 0.00 0.00 0.00 4.51
5267 5811 3.897239 TGACTTGAGATTTGTGTGGGTT 58.103 40.909 0.00 0.00 0.00 4.11
5268 5812 4.277476 TGACTTGAGATTTGTGTGGGTTT 58.723 39.130 0.00 0.00 0.00 3.27
5269 5813 4.709397 TGACTTGAGATTTGTGTGGGTTTT 59.291 37.500 0.00 0.00 0.00 2.43
5270 5814 5.186797 TGACTTGAGATTTGTGTGGGTTTTT 59.813 36.000 0.00 0.00 0.00 1.94
5303 5847 9.665719 TTTTCTTTTCCTTTTTCTTGTTATGCT 57.334 25.926 0.00 0.00 0.00 3.79
5304 5848 9.665719 TTTCTTTTCCTTTTTCTTGTTATGCTT 57.334 25.926 0.00 0.00 0.00 3.91
5305 5849 8.647143 TCTTTTCCTTTTTCTTGTTATGCTTG 57.353 30.769 0.00 0.00 0.00 4.01
5306 5850 8.474025 TCTTTTCCTTTTTCTTGTTATGCTTGA 58.526 29.630 0.00 0.00 0.00 3.02
5307 5851 9.264719 CTTTTCCTTTTTCTTGTTATGCTTGAT 57.735 29.630 0.00 0.00 0.00 2.57
5308 5852 9.612066 TTTTCCTTTTTCTTGTTATGCTTGATT 57.388 25.926 0.00 0.00 0.00 2.57
5309 5853 8.592105 TTCCTTTTTCTTGTTATGCTTGATTG 57.408 30.769 0.00 0.00 0.00 2.67
5310 5854 7.950512 TCCTTTTTCTTGTTATGCTTGATTGA 58.049 30.769 0.00 0.00 0.00 2.57
5311 5855 8.084073 TCCTTTTTCTTGTTATGCTTGATTGAG 58.916 33.333 0.00 0.00 0.00 3.02
5312 5856 7.869429 CCTTTTTCTTGTTATGCTTGATTGAGT 59.131 33.333 0.00 0.00 0.00 3.41
5313 5857 8.801715 TTTTTCTTGTTATGCTTGATTGAGTC 57.198 30.769 0.00 0.00 0.00 3.36
5314 5858 7.509141 TTTCTTGTTATGCTTGATTGAGTCA 57.491 32.000 0.00 0.00 34.25 3.41
5315 5859 6.486253 TCTTGTTATGCTTGATTGAGTCAC 57.514 37.500 0.00 0.00 36.32 3.67
5316 5860 6.233434 TCTTGTTATGCTTGATTGAGTCACT 58.767 36.000 0.00 0.00 36.32 3.41
5317 5861 6.369890 TCTTGTTATGCTTGATTGAGTCACTC 59.630 38.462 0.00 0.00 36.32 3.51
5318 5862 5.550290 TGTTATGCTTGATTGAGTCACTCA 58.450 37.500 2.36 2.36 38.87 3.41
5330 5874 6.631971 TTGAGTCACTCAAATGTGCAATAA 57.368 33.333 18.28 0.00 45.84 1.40
5331 5875 6.000891 TGAGTCACTCAAATGTGCAATAAC 57.999 37.500 4.55 0.00 37.57 1.89
5332 5876 5.764686 TGAGTCACTCAAATGTGCAATAACT 59.235 36.000 4.55 0.00 37.57 2.24
5333 5877 6.934083 TGAGTCACTCAAATGTGCAATAACTA 59.066 34.615 4.55 0.00 37.57 2.24
5334 5878 7.607607 TGAGTCACTCAAATGTGCAATAACTAT 59.392 33.333 4.55 0.00 37.57 2.12
5335 5879 7.755591 AGTCACTCAAATGTGCAATAACTATG 58.244 34.615 0.00 0.00 37.81 2.23
5336 5880 6.968904 GTCACTCAAATGTGCAATAACTATGG 59.031 38.462 0.00 0.00 37.81 2.74
5337 5881 5.745294 CACTCAAATGTGCAATAACTATGGC 59.255 40.000 0.00 0.00 33.16 4.40
5338 5882 5.418524 ACTCAAATGTGCAATAACTATGGCA 59.581 36.000 0.00 0.00 40.19 4.92
5339 5883 6.097270 ACTCAAATGTGCAATAACTATGGCAT 59.903 34.615 4.88 4.88 43.91 4.40
5340 5884 7.285172 ACTCAAATGTGCAATAACTATGGCATA 59.715 33.333 7.06 7.06 43.91 3.14
5341 5885 8.180706 TCAAATGTGCAATAACTATGGCATAT 57.819 30.769 7.81 2.73 43.91 1.78
5342 5886 8.298854 TCAAATGTGCAATAACTATGGCATATC 58.701 33.333 7.81 0.00 43.91 1.63
5343 5887 8.301720 CAAATGTGCAATAACTATGGCATATCT 58.698 33.333 7.81 0.83 43.91 1.98
5344 5888 8.413309 AATGTGCAATAACTATGGCATATCTT 57.587 30.769 7.81 5.36 43.91 2.40
5345 5889 7.205737 TGTGCAATAACTATGGCATATCTTG 57.794 36.000 7.81 10.02 43.91 3.02
5346 5890 6.997476 TGTGCAATAACTATGGCATATCTTGA 59.003 34.615 7.81 0.00 43.91 3.02
5347 5891 7.666804 TGTGCAATAACTATGGCATATCTTGAT 59.333 33.333 7.81 0.00 43.91 2.57
5348 5892 7.966753 GTGCAATAACTATGGCATATCTTGATG 59.033 37.037 7.81 5.07 43.91 3.07
5349 5893 7.666804 TGCAATAACTATGGCATATCTTGATGT 59.333 33.333 7.81 0.00 37.70 3.06
5350 5894 7.966753 GCAATAACTATGGCATATCTTGATGTG 59.033 37.037 7.81 3.47 32.79 3.21
5351 5895 5.954296 AACTATGGCATATCTTGATGTGC 57.046 39.130 19.45 19.45 37.85 4.57
5357 5901 4.277515 GCATATCTTGATGTGCCCTAGA 57.722 45.455 17.67 0.00 33.34 2.43
5358 5902 3.999663 GCATATCTTGATGTGCCCTAGAC 59.000 47.826 17.67 0.00 33.34 2.59
5359 5903 4.503817 GCATATCTTGATGTGCCCTAGACA 60.504 45.833 17.67 0.00 33.34 3.41
5360 5904 3.834489 ATCTTGATGTGCCCTAGACAG 57.166 47.619 0.00 0.00 0.00 3.51
5361 5905 2.820178 TCTTGATGTGCCCTAGACAGA 58.180 47.619 0.00 0.00 0.00 3.41
5362 5906 3.378512 TCTTGATGTGCCCTAGACAGAT 58.621 45.455 0.00 0.00 0.00 2.90
5363 5907 3.386078 TCTTGATGTGCCCTAGACAGATC 59.614 47.826 12.92 12.92 38.08 2.75
5364 5908 2.042464 TGATGTGCCCTAGACAGATCC 58.958 52.381 15.58 4.22 37.09 3.36
5365 5909 2.324541 GATGTGCCCTAGACAGATCCT 58.675 52.381 10.12 0.00 33.02 3.24
5366 5910 1.489481 TGTGCCCTAGACAGATCCTG 58.511 55.000 0.00 0.00 37.52 3.86
5375 5919 6.183361 GCCCTAGACAGATCCTGAGAAAAATA 60.183 42.308 0.45 0.00 35.18 1.40
5425 5969 9.163899 TCAAACAAATACCAAAGCATACGTATA 57.836 29.630 7.96 0.00 0.00 1.47
5455 5999 9.463443 AATTAGCACAAAAGTAGTTGACAAATC 57.537 29.630 0.00 0.00 32.59 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 78 4.664267 TCCCCAGCAGCTCCACCT 62.664 66.667 0.00 0.00 0.00 4.00
83 89 0.550147 TTCCCTTCCTCCTTCCCCAG 60.550 60.000 0.00 0.00 0.00 4.45
84 90 0.550147 CTTCCCTTCCTCCTTCCCCA 60.550 60.000 0.00 0.00 0.00 4.96
86 92 1.282653 CCCTTCCCTTCCTCCTTCCC 61.283 65.000 0.00 0.00 0.00 3.97
87 93 0.253207 TCCCTTCCCTTCCTCCTTCC 60.253 60.000 0.00 0.00 0.00 3.46
89 95 1.996291 CTTTCCCTTCCCTTCCTCCTT 59.004 52.381 0.00 0.00 0.00 3.36
91 97 0.033991 GCTTTCCCTTCCCTTCCTCC 60.034 60.000 0.00 0.00 0.00 4.30
92 98 0.995803 AGCTTTCCCTTCCCTTCCTC 59.004 55.000 0.00 0.00 0.00 3.71
93 99 1.461321 AAGCTTTCCCTTCCCTTCCT 58.539 50.000 0.00 0.00 0.00 3.36
94 100 2.310779 AAAGCTTTCCCTTCCCTTCC 57.689 50.000 5.69 0.00 0.00 3.46
95 101 3.898123 AGAAAAAGCTTTCCCTTCCCTTC 59.102 43.478 13.10 9.74 41.72 3.46
96 102 3.928754 AGAAAAAGCTTTCCCTTCCCTT 58.071 40.909 13.10 0.00 41.72 3.95
97 103 3.619900 AGAAAAAGCTTTCCCTTCCCT 57.380 42.857 13.10 0.00 41.72 4.20
98 104 3.244215 CCAAGAAAAAGCTTTCCCTTCCC 60.244 47.826 13.10 0.00 41.72 3.97
191 224 0.322975 AAGAAGCGCTGTGAGGTGAT 59.677 50.000 12.58 0.00 0.00 3.06
192 225 0.601046 CAAGAAGCGCTGTGAGGTGA 60.601 55.000 12.58 0.00 0.00 4.02
193 226 0.882042 ACAAGAAGCGCTGTGAGGTG 60.882 55.000 12.58 6.45 0.00 4.00
194 227 0.179045 AACAAGAAGCGCTGTGAGGT 60.179 50.000 12.58 3.05 0.00 3.85
195 228 0.236711 CAACAAGAAGCGCTGTGAGG 59.763 55.000 12.58 2.30 0.00 3.86
197 230 0.937304 GACAACAAGAAGCGCTGTGA 59.063 50.000 12.58 0.00 0.00 3.58
204 244 1.734465 CGGATGAGGACAACAAGAAGC 59.266 52.381 0.00 0.00 0.00 3.86
244 284 1.734477 CACTCACGTTCCAGCTCCG 60.734 63.158 0.00 0.00 0.00 4.63
568 608 0.255318 AGAATCTCAGCAGCAAGGGG 59.745 55.000 0.00 0.00 0.00 4.79
570 610 1.288350 CGAGAATCTCAGCAGCAAGG 58.712 55.000 11.18 0.00 0.00 3.61
610 650 2.681421 CAGGGGGCTTTCAAGGGC 60.681 66.667 0.00 0.00 0.00 5.19
611 651 2.681421 GCAGGGGGCTTTCAAGGG 60.681 66.667 0.00 0.00 40.25 3.95
663 703 1.078143 ACGGGGATTTCAGCTCAGC 60.078 57.895 0.00 0.00 0.00 4.26
664 704 0.745845 CCACGGGGATTTCAGCTCAG 60.746 60.000 0.00 0.00 35.59 3.35
665 705 1.198094 TCCACGGGGATTTCAGCTCA 61.198 55.000 0.00 0.00 38.64 4.26
666 706 1.602237 TCCACGGGGATTTCAGCTC 59.398 57.895 0.00 0.00 38.64 4.09
667 707 3.820425 TCCACGGGGATTTCAGCT 58.180 55.556 0.00 0.00 38.64 4.24
700 740 5.313712 ACCGGAAGCAGAAAAGAAGATTTA 58.686 37.500 9.46 0.00 0.00 1.40
701 741 4.145052 ACCGGAAGCAGAAAAGAAGATTT 58.855 39.130 9.46 0.00 0.00 2.17
702 742 3.756117 ACCGGAAGCAGAAAAGAAGATT 58.244 40.909 9.46 0.00 0.00 2.40
703 743 3.425162 ACCGGAAGCAGAAAAGAAGAT 57.575 42.857 9.46 0.00 0.00 2.40
747 787 2.352715 GCAAAATTCCCCAAGAACCGAG 60.353 50.000 0.00 0.00 37.29 4.63
750 790 1.939381 GCGCAAAATTCCCCAAGAACC 60.939 52.381 0.30 0.00 37.29 3.62
769 809 1.153804 GAAACCGGACCGAGAGAGC 60.154 63.158 17.49 0.00 0.00 4.09
780 820 0.727398 GGAGCGAATCAAGAAACCGG 59.273 55.000 0.00 0.00 0.00 5.28
781 821 0.370273 CGGAGCGAATCAAGAAACCG 59.630 55.000 0.00 0.00 0.00 4.44
782 822 0.727398 CCGGAGCGAATCAAGAAACC 59.273 55.000 0.00 0.00 0.00 3.27
783 823 1.439679 ACCGGAGCGAATCAAGAAAC 58.560 50.000 9.46 0.00 0.00 2.78
784 824 2.178912 AACCGGAGCGAATCAAGAAA 57.821 45.000 9.46 0.00 0.00 2.52
807 847 1.776034 GAATGCAGGTCGCCGGAATC 61.776 60.000 5.05 0.00 41.33 2.52
810 850 4.467084 GGAATGCAGGTCGCCGGA 62.467 66.667 5.05 0.00 41.33 5.14
814 854 3.134127 GTGGGGAATGCAGGTCGC 61.134 66.667 8.31 8.31 42.89 5.19
816 856 2.043953 GGGTGGGGAATGCAGGTC 60.044 66.667 0.00 0.00 0.00 3.85
817 857 2.535317 AGGGTGGGGAATGCAGGT 60.535 61.111 0.00 0.00 0.00 4.00
831 893 1.089920 CAGAAACAGAATGCGGAGGG 58.910 55.000 0.00 0.00 42.53 4.30
874 936 4.543084 GAAGCGCAGATTGCCGCC 62.543 66.667 11.47 0.00 41.12 6.13
887 949 6.024049 CACCGATTAAATCAGAAACAGAAGC 58.976 40.000 0.00 0.00 0.00 3.86
909 971 3.037431 ACACAGATTGAGACTGAGCAC 57.963 47.619 0.00 0.00 38.55 4.40
971 1035 1.883084 CGGATGTGACTAAGCGCCC 60.883 63.158 2.29 0.00 0.00 6.13
1330 1403 5.256474 ACAAACACCTATCTCAAAGGATGG 58.744 41.667 0.00 0.00 37.57 3.51
1331 1404 6.824305 AACAAACACCTATCTCAAAGGATG 57.176 37.500 0.00 0.00 37.57 3.51
1332 1405 7.287696 ACAAAACAAACACCTATCTCAAAGGAT 59.712 33.333 0.00 0.00 37.57 3.24
1333 1406 6.605594 ACAAAACAAACACCTATCTCAAAGGA 59.394 34.615 0.00 0.00 37.57 3.36
1334 1407 6.697019 CACAAAACAAACACCTATCTCAAAGG 59.303 38.462 0.00 0.00 40.20 3.11
1335 1408 6.697019 CCACAAAACAAACACCTATCTCAAAG 59.303 38.462 0.00 0.00 0.00 2.77
1336 1409 6.568869 CCACAAAACAAACACCTATCTCAAA 58.431 36.000 0.00 0.00 0.00 2.69
1372 1448 1.748493 AGTGTAGCAGAGTAGAGCAGC 59.252 52.381 0.00 0.00 0.00 5.25
1373 1449 3.768406 CAAGTGTAGCAGAGTAGAGCAG 58.232 50.000 0.00 0.00 0.00 4.24
1376 1452 4.638421 ACTAGCAAGTGTAGCAGAGTAGAG 59.362 45.833 0.00 0.00 33.57 2.43
1378 1454 4.974368 ACTAGCAAGTGTAGCAGAGTAG 57.026 45.455 0.00 0.00 33.57 2.57
1379 1455 5.742063 TCTACTAGCAAGTGTAGCAGAGTA 58.258 41.667 0.00 0.00 36.36 2.59
1381 1457 5.568685 TTCTACTAGCAAGTGTAGCAGAG 57.431 43.478 0.00 0.00 36.36 3.35
1382 1458 5.977489 TTTCTACTAGCAAGTGTAGCAGA 57.023 39.130 0.00 0.00 36.36 4.26
1424 1506 0.235665 GTGTCCGTGCTTCACATGTG 59.764 55.000 20.18 20.18 33.40 3.21
1425 1507 0.179059 TGTGTCCGTGCTTCACATGT 60.179 50.000 0.00 0.00 37.20 3.21
1426 1508 1.159285 ATGTGTCCGTGCTTCACATG 58.841 50.000 8.82 0.00 46.49 3.21
1427 1509 3.631453 ATGTGTCCGTGCTTCACAT 57.369 47.368 4.51 4.51 44.51 3.21
1428 1510 0.884259 CCATGTGTCCGTGCTTCACA 60.884 55.000 0.00 0.00 44.29 3.58
1429 1511 1.868997 CCATGTGTCCGTGCTTCAC 59.131 57.895 0.00 0.00 0.00 3.18
1430 1512 1.965930 GCCATGTGTCCGTGCTTCA 60.966 57.895 0.00 0.00 0.00 3.02
1431 1513 1.672356 AGCCATGTGTCCGTGCTTC 60.672 57.895 0.00 0.00 0.00 3.86
1432 1514 1.968017 CAGCCATGTGTCCGTGCTT 60.968 57.895 0.00 0.00 0.00 3.91
1433 1515 2.359107 CAGCCATGTGTCCGTGCT 60.359 61.111 0.00 0.00 0.00 4.40
1434 1516 3.434319 CCAGCCATGTGTCCGTGC 61.434 66.667 0.00 0.00 0.00 5.34
1435 1517 2.747460 CCCAGCCATGTGTCCGTG 60.747 66.667 0.00 0.00 0.00 4.94
1436 1518 2.748058 GAACCCAGCCATGTGTCCGT 62.748 60.000 0.00 0.00 0.00 4.69
1437 1519 2.034066 AACCCAGCCATGTGTCCG 59.966 61.111 0.00 0.00 0.00 4.79
1438 1520 0.962356 CTGAACCCAGCCATGTGTCC 60.962 60.000 0.00 0.00 33.07 4.02
1439 1521 2.559785 CTGAACCCAGCCATGTGTC 58.440 57.895 0.00 0.00 33.07 3.67
1440 1522 4.828409 CTGAACCCAGCCATGTGT 57.172 55.556 0.00 0.00 33.07 3.72
1547 1630 4.566426 AAGCTCTCCTAGAACTGCATTT 57.434 40.909 0.00 0.00 0.00 2.32
1578 1661 2.236395 ACCACCCTACTATGTGCACTTC 59.764 50.000 19.41 0.00 0.00 3.01
1604 1691 6.282199 TGTAAGAACCCTATTGTCTGAGAC 57.718 41.667 5.47 5.47 0.00 3.36
1612 1699 6.608610 CGGTTTTCTTGTAAGAACCCTATTG 58.391 40.000 6.56 0.00 44.18 1.90
1622 1709 3.844099 GCATTACGCGGTTTTCTTGTAAG 59.156 43.478 12.47 0.00 0.00 2.34
1710 1797 5.547181 TGTATCACAACACTCTCTACTCG 57.453 43.478 0.00 0.00 0.00 4.18
2016 2243 3.820467 CCACCTCTGTGCAAGATTTGTTA 59.180 43.478 0.00 0.00 41.35 2.41
2031 2258 6.384015 TCACAACATATACAGATTCCACCTCT 59.616 38.462 0.00 0.00 0.00 3.69
2213 2440 7.657761 CCCTTGATGTAGTAGTATTCATGGAAC 59.342 40.741 17.96 0.00 0.00 3.62
2276 2503 2.290960 ACAGGCTTCCACCCAAATCTAC 60.291 50.000 0.00 0.00 0.00 2.59
2307 2534 8.554490 TCTAAAAGAGCTCAAGGGATATAAGT 57.446 34.615 17.77 0.00 0.00 2.24
2314 2541 7.106239 CAGTAAATCTAAAAGAGCTCAAGGGA 58.894 38.462 17.77 7.62 0.00 4.20
2359 2586 5.291614 GGTATACACAAATTGGCAATGCTTG 59.708 40.000 14.47 16.93 0.00 4.01
2363 2590 6.629128 TCAAGGTATACACAAATTGGCAATG 58.371 36.000 14.47 6.37 0.00 2.82
2440 2669 4.984785 GGGTGCTTTTCTCATTTCAGAAAC 59.015 41.667 0.00 0.00 41.20 2.78
2448 2678 1.260544 GCTGGGGTGCTTTTCTCATT 58.739 50.000 0.00 0.00 0.00 2.57
2458 2688 2.348411 ATAGTTATGTGCTGGGGTGC 57.652 50.000 0.00 0.00 0.00 5.01
2485 2715 3.615496 GTCAGAATTTTCATGGCATGTGC 59.385 43.478 25.62 6.53 41.14 4.57
2497 2727 9.898152 TTTAACCCAAGAAAATGTCAGAATTTT 57.102 25.926 0.00 0.00 41.34 1.82
2536 2767 1.108776 GTCATGCCATGGCTGAACAT 58.891 50.000 35.53 18.84 42.51 2.71
2544 2775 1.894466 TCTTTTGGTGTCATGCCATGG 59.106 47.619 7.63 7.63 35.71 3.66
2768 3000 6.052360 GGGAAATCCTTCTACTCTCATTGAC 58.948 44.000 0.00 0.00 35.95 3.18
2853 3086 7.458409 AGTAGGTCTGTACTTTCAAATACGA 57.542 36.000 0.00 0.00 28.15 3.43
2989 3222 4.576463 CCCAGCTCAAAGTGGTCATTATAC 59.424 45.833 0.00 0.00 31.17 1.47
3031 3264 1.807142 CCGAAAGAGTGGGAAAAGCTC 59.193 52.381 0.00 0.00 0.00 4.09
3180 3414 8.097662 AGTAGTAGTTGGAGGAAATCTGAAAAG 58.902 37.037 0.00 0.00 0.00 2.27
3280 3514 8.021973 GGACTGAAGTTCTGTACATATATACGG 58.978 40.741 17.70 0.00 30.47 4.02
3282 3516 9.900710 CTGGACTGAAGTTCTGTACATATATAC 57.099 37.037 23.50 6.20 38.28 1.47
3301 3691 4.394300 GGAATTCAGATGAACACTGGACTG 59.606 45.833 7.93 0.00 36.80 3.51
3390 3780 8.077991 CACACACTTCATGTTCAGAAATTACAT 58.922 33.333 0.00 0.00 40.64 2.29
3391 3781 7.416817 CACACACTTCATGTTCAGAAATTACA 58.583 34.615 0.00 0.00 40.64 2.41
3394 3784 5.068198 AGCACACACTTCATGTTCAGAAATT 59.932 36.000 0.00 0.00 40.64 1.82
3417 3807 8.919661 GCACTAAAAGAAATCAAAAGGATCAAG 58.080 33.333 0.00 0.00 34.28 3.02
3504 3894 7.467267 GCTTTGAGAATGTTCACTTTGTACTCA 60.467 37.037 0.00 0.00 0.00 3.41
3516 3909 7.008992 GCTATTCACAATGCTTTGAGAATGTTC 59.991 37.037 30.57 21.02 46.15 3.18
3519 3912 6.327154 TGCTATTCACAATGCTTTGAGAATG 58.673 36.000 30.57 24.05 46.15 2.67
3523 3916 6.455113 GCAATTGCTATTCACAATGCTTTGAG 60.455 38.462 23.21 10.93 37.78 3.02
3526 3919 5.239351 TGCAATTGCTATTCACAATGCTTT 58.761 33.333 29.37 0.00 42.66 3.51
3530 3923 5.006261 CACCATGCAATTGCTATTCACAATG 59.994 40.000 29.37 20.45 42.66 2.82
3531 3924 5.105269 TCACCATGCAATTGCTATTCACAAT 60.105 36.000 29.37 10.58 42.66 2.71
3901 4390 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
3902 4391 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
3903 4392 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
3904 4393 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
3905 4394 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
3906 4395 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
3907 4396 5.643777 ACTTGAGTCATCTATTTTGGAACGG 59.356 40.000 0.00 0.00 0.00 4.44
3908 4397 6.727824 ACTTGAGTCATCTATTTTGGAACG 57.272 37.500 0.00 0.00 0.00 3.95
3909 4398 8.352942 ACAAACTTGAGTCATCTATTTTGGAAC 58.647 33.333 9.57 0.00 36.13 3.62
3910 4399 8.463930 ACAAACTTGAGTCATCTATTTTGGAA 57.536 30.769 9.57 0.00 36.13 3.53
3911 4400 8.999431 GTACAAACTTGAGTCATCTATTTTGGA 58.001 33.333 9.57 0.96 36.13 3.53
3912 4401 9.003658 AGTACAAACTTGAGTCATCTATTTTGG 57.996 33.333 9.57 0.00 36.13 3.28
3936 4425 9.003658 CCAAAATAGATGACTCAAGTTTGTAGT 57.996 33.333 0.00 0.00 0.00 2.73
3937 4426 9.219603 TCCAAAATAGATGACTCAAGTTTGTAG 57.780 33.333 0.00 0.00 0.00 2.74
3938 4427 9.567776 TTCCAAAATAGATGACTCAAGTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
3939 4428 8.352942 GTTCCAAAATAGATGACTCAAGTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
3940 4429 7.535258 CGTTCCAAAATAGATGACTCAAGTTTG 59.465 37.037 0.00 0.00 0.00 2.93
3941 4430 7.308589 CCGTTCCAAAATAGATGACTCAAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
3942 4431 6.149474 CCGTTCCAAAATAGATGACTCAAGTT 59.851 38.462 0.00 0.00 0.00 2.66
3943 4432 5.643777 CCGTTCCAAAATAGATGACTCAAGT 59.356 40.000 0.00 0.00 0.00 3.16
3944 4433 5.874810 TCCGTTCCAAAATAGATGACTCAAG 59.125 40.000 0.00 0.00 0.00 3.02
3945 4434 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
3946 4435 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
3947 4436 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
3948 4437 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
3949 4438 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
3950 4439 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
3951 4440 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
3952 4441 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
3953 4442 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
3954 4443 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
3955 4444 6.811634 TTATACTCCCTCCGTTCCAAAATA 57.188 37.500 0.00 0.00 0.00 1.40
3956 4445 5.703730 TTATACTCCCTCCGTTCCAAAAT 57.296 39.130 0.00 0.00 0.00 1.82
3957 4446 5.502089 TTTATACTCCCTCCGTTCCAAAA 57.498 39.130 0.00 0.00 0.00 2.44
3958 4447 5.221884 TGTTTTATACTCCCTCCGTTCCAAA 60.222 40.000 0.00 0.00 0.00 3.28
3959 4448 4.286549 TGTTTTATACTCCCTCCGTTCCAA 59.713 41.667 0.00 0.00 0.00 3.53
3960 4449 3.839490 TGTTTTATACTCCCTCCGTTCCA 59.161 43.478 0.00 0.00 0.00 3.53
3961 4450 4.439968 CTGTTTTATACTCCCTCCGTTCC 58.560 47.826 0.00 0.00 0.00 3.62
3962 4451 4.439968 CCTGTTTTATACTCCCTCCGTTC 58.560 47.826 0.00 0.00 0.00 3.95
3963 4452 3.199289 CCCTGTTTTATACTCCCTCCGTT 59.801 47.826 0.00 0.00 0.00 4.44
3964 4453 2.770232 CCCTGTTTTATACTCCCTCCGT 59.230 50.000 0.00 0.00 0.00 4.69
3965 4454 2.104281 CCCCTGTTTTATACTCCCTCCG 59.896 54.545 0.00 0.00 0.00 4.63
3966 4455 3.136077 GTCCCCTGTTTTATACTCCCTCC 59.864 52.174 0.00 0.00 0.00 4.30
3967 4456 3.181468 CGTCCCCTGTTTTATACTCCCTC 60.181 52.174 0.00 0.00 0.00 4.30
3968 4457 2.770232 CGTCCCCTGTTTTATACTCCCT 59.230 50.000 0.00 0.00 0.00 4.20
3969 4458 2.502947 ACGTCCCCTGTTTTATACTCCC 59.497 50.000 0.00 0.00 0.00 4.30
3970 4459 3.900966 ACGTCCCCTGTTTTATACTCC 57.099 47.619 0.00 0.00 0.00 3.85
3971 4460 7.011763 GGAATAAACGTCCCCTGTTTTATACTC 59.988 40.741 0.00 0.00 39.96 2.59
3972 4461 6.825213 GGAATAAACGTCCCCTGTTTTATACT 59.175 38.462 0.00 0.00 39.96 2.12
3973 4462 6.598850 TGGAATAAACGTCCCCTGTTTTATAC 59.401 38.462 0.00 0.00 39.96 1.47
3974 4463 6.598850 GTGGAATAAACGTCCCCTGTTTTATA 59.401 38.462 0.00 0.00 39.96 0.98
3975 4464 5.416639 GTGGAATAAACGTCCCCTGTTTTAT 59.583 40.000 0.00 0.00 39.96 1.40
3976 4465 4.761227 GTGGAATAAACGTCCCCTGTTTTA 59.239 41.667 0.00 0.00 39.96 1.52
3977 4466 3.570975 GTGGAATAAACGTCCCCTGTTTT 59.429 43.478 0.00 0.00 39.96 2.43
3984 4473 2.021457 CCATGGTGGAATAAACGTCCC 58.979 52.381 2.57 0.00 40.96 4.46
4055 4544 2.603892 CGTGAAGATATGGCTGCATTGC 60.604 50.000 0.46 0.46 0.00 3.56
4207 4696 0.252479 AACTGAGAGATGCAGCTGGG 59.748 55.000 10.40 0.00 36.86 4.45
4208 4697 1.066358 TGAACTGAGAGATGCAGCTGG 60.066 52.381 10.40 0.00 36.86 4.85
4257 4746 0.673022 CAGGCTGGAGACACTGCTTC 60.673 60.000 6.61 0.00 35.86 3.86
4298 4787 5.699915 GGTCCACATCTTCATGATCATACAG 59.300 44.000 8.15 7.39 33.72 2.74
4324 4813 3.211045 GAGGTGCTCAAAGTTGTGGTAA 58.789 45.455 0.00 0.00 0.00 2.85
4476 4965 3.188048 CCATCTCTTGATATTTCGGCTGC 59.812 47.826 0.00 0.00 0.00 5.25
4547 5036 1.153549 GATGACGGCAGGGACAGAC 60.154 63.158 0.00 0.00 0.00 3.51
4549 5038 1.153489 CAGATGACGGCAGGGACAG 60.153 63.158 0.00 0.00 0.00 3.51
4550 5039 2.659063 CCAGATGACGGCAGGGACA 61.659 63.158 0.00 0.00 0.00 4.02
4551 5040 2.187946 CCAGATGACGGCAGGGAC 59.812 66.667 0.00 0.00 0.00 4.46
4576 5070 0.819582 AGCCAAGAATGAATTGCCCG 59.180 50.000 0.00 0.00 0.00 6.13
4663 5157 0.535102 GTGTTCCACTCACCACAGGG 60.535 60.000 0.00 0.00 41.29 4.45
4696 5190 9.277783 AGCAGCACTTACCTAGATAATATTTTG 57.722 33.333 0.00 0.00 0.00 2.44
4717 5215 1.028330 TGATGGTAGCAAGCAGCAGC 61.028 55.000 0.00 0.00 43.99 5.25
4720 5218 1.602851 CAGATGATGGTAGCAAGCAGC 59.397 52.381 0.00 3.45 46.19 5.25
4739 5237 0.319211 CTGCTACCACGAAACGGTCA 60.319 55.000 0.00 0.00 37.99 4.02
4750 5248 7.502895 TCAAATACAAACTTAAACCTGCTACCA 59.497 33.333 0.00 0.00 0.00 3.25
4819 5317 9.046296 GGATACAATACTTCATACAAACTCCAG 57.954 37.037 0.00 0.00 0.00 3.86
4921 5420 4.609691 ACAAACAAACCAAGTCTACACG 57.390 40.909 0.00 0.00 0.00 4.49
4978 5490 2.030540 CACAAACCATGCCAAGTCTCAG 60.031 50.000 0.00 0.00 0.00 3.35
5003 5515 7.338800 AGTGGAATTTACCATGCATAAAGAG 57.661 36.000 0.00 0.00 42.17 2.85
5013 5525 4.832266 TGTGAAGCAAGTGGAATTTACCAT 59.168 37.500 0.00 0.00 42.17 3.55
5014 5526 4.037446 GTGTGAAGCAAGTGGAATTTACCA 59.963 41.667 0.00 0.00 37.63 3.25
5026 5570 1.605710 CAGTTCCAGGTGTGAAGCAAG 59.394 52.381 0.00 0.00 0.00 4.01
5068 5612 3.665323 CGAGTTTCCGATCAAGCAAACAG 60.665 47.826 0.00 0.00 32.20 3.16
5074 5618 1.135083 TCCTCGAGTTTCCGATCAAGC 60.135 52.381 12.31 0.00 37.96 4.01
5164 5708 6.356556 ACTTAGATGTGCAATACTTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
5165 5709 6.483307 TGACTTAGATGTGCAATACTTATGGC 59.517 38.462 0.00 0.00 33.16 4.40
5166 5710 8.613060 ATGACTTAGATGTGCAATACTTATGG 57.387 34.615 0.00 0.00 0.00 2.74
5174 5718 8.929746 CACGAATATATGACTTAGATGTGCAAT 58.070 33.333 0.00 0.00 0.00 3.56
5175 5719 7.926018 ACACGAATATATGACTTAGATGTGCAA 59.074 33.333 0.00 0.00 0.00 4.08
5176 5720 7.382218 CACACGAATATATGACTTAGATGTGCA 59.618 37.037 0.00 0.00 0.00 4.57
5177 5721 7.148738 CCACACGAATATATGACTTAGATGTGC 60.149 40.741 0.00 0.00 33.02 4.57
5178 5722 7.329471 CCCACACGAATATATGACTTAGATGTG 59.671 40.741 0.00 0.00 33.91 3.21
5179 5723 7.015292 ACCCACACGAATATATGACTTAGATGT 59.985 37.037 0.00 0.00 0.00 3.06
5180 5724 7.378966 ACCCACACGAATATATGACTTAGATG 58.621 38.462 0.00 0.00 0.00 2.90
5181 5725 7.540474 ACCCACACGAATATATGACTTAGAT 57.460 36.000 0.00 0.00 0.00 1.98
5182 5726 6.971726 ACCCACACGAATATATGACTTAGA 57.028 37.500 0.00 0.00 0.00 2.10
5183 5727 7.883217 AGTACCCACACGAATATATGACTTAG 58.117 38.462 0.00 0.00 0.00 2.18
5184 5728 7.828508 AGTACCCACACGAATATATGACTTA 57.171 36.000 0.00 0.00 0.00 2.24
5185 5729 6.726490 AGTACCCACACGAATATATGACTT 57.274 37.500 0.00 0.00 0.00 3.01
5186 5730 6.239232 GGAAGTACCCACACGAATATATGACT 60.239 42.308 0.00 0.00 0.00 3.41
5187 5731 5.924825 GGAAGTACCCACACGAATATATGAC 59.075 44.000 0.00 0.00 0.00 3.06
5188 5732 5.836898 AGGAAGTACCCACACGAATATATGA 59.163 40.000 0.00 0.00 40.05 2.15
5189 5733 6.097915 AGGAAGTACCCACACGAATATATG 57.902 41.667 0.00 0.00 40.05 1.78
5190 5734 6.742559 AAGGAAGTACCCACACGAATATAT 57.257 37.500 0.00 0.00 40.05 0.86
5191 5735 6.549433 AAAGGAAGTACCCACACGAATATA 57.451 37.500 0.00 0.00 40.05 0.86
5192 5736 5.431179 AAAGGAAGTACCCACACGAATAT 57.569 39.130 0.00 0.00 40.05 1.28
5193 5737 4.895668 AAAGGAAGTACCCACACGAATA 57.104 40.909 0.00 0.00 40.05 1.75
5194 5738 3.782656 AAAGGAAGTACCCACACGAAT 57.217 42.857 0.00 0.00 40.05 3.34
5195 5739 3.564053 AAAAGGAAGTACCCACACGAA 57.436 42.857 0.00 0.00 40.05 3.85
5196 5740 3.564053 AAAAAGGAAGTACCCACACGA 57.436 42.857 0.00 0.00 40.05 4.35
5215 5759 9.612066 AGCATAACAGGAAAAATGAAAAGAAAA 57.388 25.926 0.00 0.00 0.00 2.29
5216 5760 9.612066 AAGCATAACAGGAAAAATGAAAAGAAA 57.388 25.926 0.00 0.00 0.00 2.52
5217 5761 9.044150 CAAGCATAACAGGAAAAATGAAAAGAA 57.956 29.630 0.00 0.00 0.00 2.52
5218 5762 8.420222 TCAAGCATAACAGGAAAAATGAAAAGA 58.580 29.630 0.00 0.00 0.00 2.52
5219 5763 8.592105 TCAAGCATAACAGGAAAAATGAAAAG 57.408 30.769 0.00 0.00 0.00 2.27
5220 5764 9.558396 AATCAAGCATAACAGGAAAAATGAAAA 57.442 25.926 0.00 0.00 0.00 2.29
5221 5765 8.991026 CAATCAAGCATAACAGGAAAAATGAAA 58.009 29.630 0.00 0.00 0.00 2.69
5222 5766 8.366401 TCAATCAAGCATAACAGGAAAAATGAA 58.634 29.630 0.00 0.00 0.00 2.57
5223 5767 7.814107 GTCAATCAAGCATAACAGGAAAAATGA 59.186 33.333 0.00 0.00 0.00 2.57
5224 5768 7.816031 AGTCAATCAAGCATAACAGGAAAAATG 59.184 33.333 0.00 0.00 0.00 2.32
5225 5769 7.899973 AGTCAATCAAGCATAACAGGAAAAAT 58.100 30.769 0.00 0.00 0.00 1.82
5226 5770 7.288810 AGTCAATCAAGCATAACAGGAAAAA 57.711 32.000 0.00 0.00 0.00 1.94
5227 5771 6.899393 AGTCAATCAAGCATAACAGGAAAA 57.101 33.333 0.00 0.00 0.00 2.29
5228 5772 6.489700 TCAAGTCAATCAAGCATAACAGGAAA 59.510 34.615 0.00 0.00 0.00 3.13
5229 5773 6.003326 TCAAGTCAATCAAGCATAACAGGAA 58.997 36.000 0.00 0.00 0.00 3.36
5230 5774 5.559770 TCAAGTCAATCAAGCATAACAGGA 58.440 37.500 0.00 0.00 0.00 3.86
5231 5775 5.645067 TCTCAAGTCAATCAAGCATAACAGG 59.355 40.000 0.00 0.00 0.00 4.00
5232 5776 6.732531 TCTCAAGTCAATCAAGCATAACAG 57.267 37.500 0.00 0.00 0.00 3.16
5233 5777 7.692460 AATCTCAAGTCAATCAAGCATAACA 57.308 32.000 0.00 0.00 0.00 2.41
5234 5778 8.025445 ACAAATCTCAAGTCAATCAAGCATAAC 58.975 33.333 0.00 0.00 0.00 1.89
5235 5779 8.024865 CACAAATCTCAAGTCAATCAAGCATAA 58.975 33.333 0.00 0.00 0.00 1.90
5236 5780 7.175467 ACACAAATCTCAAGTCAATCAAGCATA 59.825 33.333 0.00 0.00 0.00 3.14
5237 5781 6.015688 ACACAAATCTCAAGTCAATCAAGCAT 60.016 34.615 0.00 0.00 0.00 3.79
5238 5782 5.300034 ACACAAATCTCAAGTCAATCAAGCA 59.700 36.000 0.00 0.00 0.00 3.91
5239 5783 5.628193 CACACAAATCTCAAGTCAATCAAGC 59.372 40.000 0.00 0.00 0.00 4.01
5240 5784 6.147581 CCACACAAATCTCAAGTCAATCAAG 58.852 40.000 0.00 0.00 0.00 3.02
5241 5785 5.009911 CCCACACAAATCTCAAGTCAATCAA 59.990 40.000 0.00 0.00 0.00 2.57
5242 5786 4.520111 CCCACACAAATCTCAAGTCAATCA 59.480 41.667 0.00 0.00 0.00 2.57
5243 5787 4.520492 ACCCACACAAATCTCAAGTCAATC 59.480 41.667 0.00 0.00 0.00 2.67
5244 5788 4.473444 ACCCACACAAATCTCAAGTCAAT 58.527 39.130 0.00 0.00 0.00 2.57
5245 5789 3.897239 ACCCACACAAATCTCAAGTCAA 58.103 40.909 0.00 0.00 0.00 3.18
5246 5790 3.576078 ACCCACACAAATCTCAAGTCA 57.424 42.857 0.00 0.00 0.00 3.41
5247 5791 4.918810 AAACCCACACAAATCTCAAGTC 57.081 40.909 0.00 0.00 0.00 3.01
5248 5792 5.675684 AAAAACCCACACAAATCTCAAGT 57.324 34.783 0.00 0.00 0.00 3.16
5277 5821 9.665719 AGCATAACAAGAAAAAGGAAAAGAAAA 57.334 25.926 0.00 0.00 0.00 2.29
5278 5822 9.665719 AAGCATAACAAGAAAAAGGAAAAGAAA 57.334 25.926 0.00 0.00 0.00 2.52
5279 5823 9.097257 CAAGCATAACAAGAAAAAGGAAAAGAA 57.903 29.630 0.00 0.00 0.00 2.52
5280 5824 8.474025 TCAAGCATAACAAGAAAAAGGAAAAGA 58.526 29.630 0.00 0.00 0.00 2.52
5281 5825 8.647143 TCAAGCATAACAAGAAAAAGGAAAAG 57.353 30.769 0.00 0.00 0.00 2.27
5282 5826 9.612066 AATCAAGCATAACAAGAAAAAGGAAAA 57.388 25.926 0.00 0.00 0.00 2.29
5283 5827 9.044150 CAATCAAGCATAACAAGAAAAAGGAAA 57.956 29.630 0.00 0.00 0.00 3.13
5284 5828 8.420222 TCAATCAAGCATAACAAGAAAAAGGAA 58.580 29.630 0.00 0.00 0.00 3.36
5285 5829 7.950512 TCAATCAAGCATAACAAGAAAAAGGA 58.049 30.769 0.00 0.00 0.00 3.36
5286 5830 7.869429 ACTCAATCAAGCATAACAAGAAAAAGG 59.131 33.333 0.00 0.00 0.00 3.11
5287 5831 8.807667 ACTCAATCAAGCATAACAAGAAAAAG 57.192 30.769 0.00 0.00 0.00 2.27
5288 5832 8.412456 TGACTCAATCAAGCATAACAAGAAAAA 58.588 29.630 0.00 0.00 33.02 1.94
5289 5833 7.862372 GTGACTCAATCAAGCATAACAAGAAAA 59.138 33.333 0.00 0.00 39.72 2.29
5290 5834 7.229306 AGTGACTCAATCAAGCATAACAAGAAA 59.771 33.333 0.00 0.00 39.72 2.52
5291 5835 6.712095 AGTGACTCAATCAAGCATAACAAGAA 59.288 34.615 0.00 0.00 39.72 2.52
5292 5836 6.233434 AGTGACTCAATCAAGCATAACAAGA 58.767 36.000 0.00 0.00 39.72 3.02
5293 5837 6.148315 TGAGTGACTCAATCAAGCATAACAAG 59.852 38.462 13.74 0.00 39.72 3.16
5294 5838 5.997129 TGAGTGACTCAATCAAGCATAACAA 59.003 36.000 13.74 0.00 39.72 2.83
5295 5839 5.550290 TGAGTGACTCAATCAAGCATAACA 58.450 37.500 13.74 0.00 39.72 2.41
5296 5840 6.486253 TTGAGTGACTCAATCAAGCATAAC 57.514 37.500 23.02 0.00 44.27 1.89
5297 5841 7.175467 ACATTTGAGTGACTCAATCAAGCATAA 59.825 33.333 26.64 10.49 46.32 1.90
5298 5842 6.656270 ACATTTGAGTGACTCAATCAAGCATA 59.344 34.615 26.64 11.18 46.32 3.14
5299 5843 5.475909 ACATTTGAGTGACTCAATCAAGCAT 59.524 36.000 26.64 14.23 46.32 3.79
5300 5844 4.823442 ACATTTGAGTGACTCAATCAAGCA 59.177 37.500 26.64 12.59 46.32 3.91
5301 5845 5.152097 CACATTTGAGTGACTCAATCAAGC 58.848 41.667 26.64 0.00 46.32 4.01
5302 5846 5.152097 GCACATTTGAGTGACTCAATCAAG 58.848 41.667 26.64 18.24 46.32 3.02
5307 5851 6.262944 AGTTATTGCACATTTGAGTGACTCAA 59.737 34.615 23.02 23.02 46.93 3.02
5308 5852 5.764686 AGTTATTGCACATTTGAGTGACTCA 59.235 36.000 11.93 11.93 42.05 3.41
5309 5853 6.246420 AGTTATTGCACATTTGAGTGACTC 57.754 37.500 5.47 5.47 42.05 3.36
5310 5854 7.148188 CCATAGTTATTGCACATTTGAGTGACT 60.148 37.037 0.00 0.00 42.05 3.41
5311 5855 6.968904 CCATAGTTATTGCACATTTGAGTGAC 59.031 38.462 0.00 0.00 42.05 3.67
5312 5856 6.404623 GCCATAGTTATTGCACATTTGAGTGA 60.405 38.462 0.00 0.00 42.05 3.41
5313 5857 5.745294 GCCATAGTTATTGCACATTTGAGTG 59.255 40.000 0.00 0.00 42.37 3.51
5314 5858 5.418524 TGCCATAGTTATTGCACATTTGAGT 59.581 36.000 0.00 0.00 30.49 3.41
5315 5859 5.893687 TGCCATAGTTATTGCACATTTGAG 58.106 37.500 0.00 0.00 30.49 3.02
5316 5860 5.911378 TGCCATAGTTATTGCACATTTGA 57.089 34.783 0.00 0.00 30.49 2.69
5317 5861 8.301720 AGATATGCCATAGTTATTGCACATTTG 58.698 33.333 0.58 0.00 37.20 2.32
5318 5862 8.413309 AGATATGCCATAGTTATTGCACATTT 57.587 30.769 0.58 0.00 37.20 2.32
5319 5863 8.301720 CAAGATATGCCATAGTTATTGCACATT 58.698 33.333 0.58 0.00 37.20 2.71
5320 5864 7.666804 TCAAGATATGCCATAGTTATTGCACAT 59.333 33.333 0.58 0.00 37.20 3.21
5321 5865 6.997476 TCAAGATATGCCATAGTTATTGCACA 59.003 34.615 0.58 0.00 37.20 4.57
5322 5866 7.439157 TCAAGATATGCCATAGTTATTGCAC 57.561 36.000 0.58 0.00 37.20 4.57
5323 5867 7.666804 ACATCAAGATATGCCATAGTTATTGCA 59.333 33.333 1.04 1.04 38.48 4.08
5324 5868 7.966753 CACATCAAGATATGCCATAGTTATTGC 59.033 37.037 0.00 0.00 0.00 3.56
5325 5869 7.966753 GCACATCAAGATATGCCATAGTTATTG 59.033 37.037 1.96 0.00 35.32 1.90
5326 5870 8.048534 GCACATCAAGATATGCCATAGTTATT 57.951 34.615 1.96 0.00 35.32 1.40
5327 5871 7.621428 GCACATCAAGATATGCCATAGTTAT 57.379 36.000 1.96 0.00 35.32 1.89
5329 5873 5.954296 GCACATCAAGATATGCCATAGTT 57.046 39.130 1.96 0.00 35.32 2.24
5336 5880 3.999663 GTCTAGGGCACATCAAGATATGC 59.000 47.826 4.79 4.79 40.32 3.14
5337 5881 5.011431 TCTGTCTAGGGCACATCAAGATATG 59.989 44.000 0.00 0.00 0.00 1.78
5338 5882 5.150715 TCTGTCTAGGGCACATCAAGATAT 58.849 41.667 0.00 0.00 0.00 1.63
5339 5883 4.546674 TCTGTCTAGGGCACATCAAGATA 58.453 43.478 0.00 0.00 0.00 1.98
5340 5884 3.378512 TCTGTCTAGGGCACATCAAGAT 58.621 45.455 0.00 0.00 0.00 2.40
5341 5885 2.820178 TCTGTCTAGGGCACATCAAGA 58.180 47.619 0.00 0.00 0.00 3.02
5342 5886 3.494048 GGATCTGTCTAGGGCACATCAAG 60.494 52.174 0.00 0.00 0.00 3.02
5343 5887 2.435805 GGATCTGTCTAGGGCACATCAA 59.564 50.000 0.00 0.00 0.00 2.57
5344 5888 2.042464 GGATCTGTCTAGGGCACATCA 58.958 52.381 0.00 0.00 0.00 3.07
5345 5889 2.036992 CAGGATCTGTCTAGGGCACATC 59.963 54.545 0.00 0.00 0.00 3.06
5346 5890 2.045524 CAGGATCTGTCTAGGGCACAT 58.954 52.381 0.00 0.00 0.00 3.21
5347 5891 1.007118 TCAGGATCTGTCTAGGGCACA 59.993 52.381 0.00 0.00 32.61 4.57
5348 5892 1.686052 CTCAGGATCTGTCTAGGGCAC 59.314 57.143 0.00 0.00 32.61 5.01
5349 5893 1.570979 TCTCAGGATCTGTCTAGGGCA 59.429 52.381 0.00 0.00 32.61 5.36
5350 5894 2.373335 TCTCAGGATCTGTCTAGGGC 57.627 55.000 0.00 0.00 32.61 5.19
5351 5895 5.683876 TTTTTCTCAGGATCTGTCTAGGG 57.316 43.478 0.00 0.00 32.61 3.53
5352 5896 9.844257 ATTTATTTTTCTCAGGATCTGTCTAGG 57.156 33.333 0.00 0.00 32.61 3.02
5355 5899 9.917887 ATGATTTATTTTTCTCAGGATCTGTCT 57.082 29.630 0.00 0.00 32.61 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.