Multiple sequence alignment - TraesCS5B01G026900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G026900 chr5B 100.000 4625 0 0 1 4625 26005146 26009770 0.000000e+00 8541.0
1 TraesCS5B01G026900 chr5B 91.120 2973 230 19 974 3930 25993206 25996160 0.000000e+00 3997.0
2 TraesCS5B01G026900 chr5B 93.231 2659 159 8 974 3626 26324041 26321398 0.000000e+00 3893.0
3 TraesCS5B01G026900 chr5B 85.819 2729 306 46 1072 3748 26306902 26304203 0.000000e+00 2820.0
4 TraesCS5B01G026900 chr5B 95.763 118 4 1 4386 4502 447149215 447149098 6.110000e-44 189.0
5 TraesCS5B01G026900 chr5B 91.667 132 6 4 4371 4501 654493703 654493576 1.320000e-40 178.0
6 TraesCS5B01G026900 chr5B 90.977 133 9 3 4379 4509 710604131 710604262 4.760000e-40 176.0
7 TraesCS5B01G026900 chr5B 86.885 122 11 2 3670 3788 26321402 26321283 1.040000e-26 132.0
8 TraesCS5B01G026900 chr5B 85.714 63 8 1 896 958 26324089 26324028 1.070000e-06 65.8
9 TraesCS5B01G026900 chr5D 87.515 3356 322 49 446 3740 34887731 34891050 0.000000e+00 3786.0
10 TraesCS5B01G026900 chr5D 93.314 2468 144 9 974 3435 34797988 34800440 0.000000e+00 3624.0
11 TraesCS5B01G026900 chr5D 85.709 2813 318 40 974 3740 34803075 34805849 0.000000e+00 2891.0
12 TraesCS5B01G026900 chr5D 86.699 1669 193 14 974 2627 34869649 34871303 0.000000e+00 1825.0
13 TraesCS5B01G026900 chr5D 89.373 781 77 4 2650 3424 34873094 34873874 0.000000e+00 977.0
14 TraesCS5B01G026900 chr5D 84.778 427 27 18 1 394 34887319 34887740 1.210000e-105 394.0
15 TraesCS5B01G026900 chr5D 96.257 187 7 0 4190 4376 35166473 35166287 1.620000e-79 307.0
16 TraesCS5B01G026900 chr5D 91.525 177 14 1 3645 3821 34875810 34875985 4.620000e-60 243.0
17 TraesCS5B01G026900 chr5D 95.973 149 6 0 4042 4190 34876385 34876533 4.620000e-60 243.0
18 TraesCS5B01G026900 chr5D 93.056 144 9 1 3512 3655 34800458 34800600 4.690000e-50 209.0
19 TraesCS5B01G026900 chr5D 81.091 275 35 13 3663 3925 34800692 34800961 2.180000e-48 204.0
20 TraesCS5B01G026900 chr5D 96.032 126 4 1 4498 4622 35166285 35166160 2.180000e-48 204.0
21 TraesCS5B01G026900 chr5D 87.302 63 8 0 896 958 34797939 34798001 6.420000e-09 73.1
22 TraesCS5B01G026900 chr5A 86.991 3167 328 42 622 3740 23173522 23176652 0.000000e+00 3489.0
23 TraesCS5B01G026900 chr5A 86.883 3080 298 55 475 3495 23616073 23613041 0.000000e+00 3352.0
24 TraesCS5B01G026900 chr5A 91.573 178 12 3 4194 4371 23817514 23817340 4.620000e-60 243.0
25 TraesCS5B01G026900 chr5A 96.522 115 1 3 4509 4622 23817341 23817229 2.200000e-43 187.0
26 TraesCS5B01G026900 chr5A 86.301 146 7 11 488 621 23169055 23169199 3.730000e-31 147.0
27 TraesCS5B01G026900 chr5A 100.000 42 0 0 450 491 23621640 23621599 1.380000e-10 78.7
28 TraesCS5B01G026900 chr3B 85.132 3020 343 42 677 3641 638313387 638310419 0.000000e+00 2992.0
29 TraesCS5B01G026900 chr3B 93.651 126 5 3 4382 4506 650615893 650616016 7.900000e-43 185.0
30 TraesCS5B01G026900 chr3A 85.246 2623 317 35 1052 3645 621847732 621845151 0.000000e+00 2636.0
31 TraesCS5B01G026900 chr3A 85.897 312 31 8 697 1000 621848569 621848263 2.080000e-83 320.0
32 TraesCS5B01G026900 chr3A 94.872 39 1 1 526 564 621848791 621848754 5.000000e-05 60.2
33 TraesCS5B01G026900 chr3D 84.252 381 49 8 870 1247 478639010 478638638 1.220000e-95 361.0
34 TraesCS5B01G026900 chr3D 95.000 120 5 1 4384 4502 5478057 5478176 2.200000e-43 187.0
35 TraesCS5B01G026900 chr3D 96.875 32 1 0 526 557 478639055 478639024 2.000000e-03 54.7
36 TraesCS5B01G026900 chr2B 96.581 117 3 1 4386 4501 520208704 520208588 4.720000e-45 193.0
37 TraesCS5B01G026900 chr4B 96.552 116 3 1 4386 4501 364657133 364657019 1.700000e-44 191.0
38 TraesCS5B01G026900 chr2D 95.041 121 5 1 4382 4501 7396465 7396585 6.110000e-44 189.0
39 TraesCS5B01G026900 chr2D 89.706 136 11 3 4384 4517 138294389 138294523 2.210000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G026900 chr5B 26005146 26009770 4624 False 8541.00 8541 100.000000 1 4625 1 chr5B.!!$F2 4624
1 TraesCS5B01G026900 chr5B 25993206 25996160 2954 False 3997.00 3997 91.120000 974 3930 1 chr5B.!!$F1 2956
2 TraesCS5B01G026900 chr5B 26304203 26306902 2699 True 2820.00 2820 85.819000 1072 3748 1 chr5B.!!$R1 2676
3 TraesCS5B01G026900 chr5B 26321283 26324089 2806 True 1363.60 3893 88.610000 896 3788 3 chr5B.!!$R4 2892
4 TraesCS5B01G026900 chr5D 34887319 34891050 3731 False 2090.00 3786 86.146500 1 3740 2 chr5D.!!$F3 3739
5 TraesCS5B01G026900 chr5D 34797939 34805849 7910 False 1400.22 3624 88.094400 896 3925 5 chr5D.!!$F1 3029
6 TraesCS5B01G026900 chr5D 34869649 34876533 6884 False 822.00 1825 90.892500 974 4190 4 chr5D.!!$F2 3216
7 TraesCS5B01G026900 chr5A 23173522 23176652 3130 False 3489.00 3489 86.991000 622 3740 1 chr5A.!!$F2 3118
8 TraesCS5B01G026900 chr5A 23613041 23616073 3032 True 3352.00 3352 86.883000 475 3495 1 chr5A.!!$R1 3020
9 TraesCS5B01G026900 chr3B 638310419 638313387 2968 True 2992.00 2992 85.132000 677 3641 1 chr3B.!!$R1 2964
10 TraesCS5B01G026900 chr3A 621845151 621848791 3640 True 1005.40 2636 88.671667 526 3645 3 chr3A.!!$R1 3119

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
733 846 0.612744 GGCTGAAGGAACTCTGAGCT 59.387 55.0 4.19 0.00 38.49 4.09 F
1473 2128 0.180642 TCCTCTATGACGCTCTCGGT 59.819 55.0 0.00 0.00 40.69 4.69 F
1475 2130 0.309302 CTCTATGACGCTCTCGGTGG 59.691 60.0 0.00 0.00 40.69 4.61 F
2440 8222 0.393537 CCTCCCAGCTAAAGCAGTGG 60.394 60.0 4.54 4.11 45.16 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2640 8422 1.110442 TGGAGCAAACCACCTTTGTG 58.890 50.0 0.00 0.0 41.37 3.33 R
2781 10346 0.534877 TGCCGACTGTGAAAGCATGT 60.535 50.0 0.00 0.0 0.00 3.21 R
3138 10703 1.130955 GCTCAACAACAAATGCACGG 58.869 50.0 0.00 0.0 0.00 4.94 R
4385 13901 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.0 46.06 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
324 354 8.554835 AGAAGAAGAATTAAGTAACCAGAAGC 57.445 34.615 0.00 0.00 0.00 3.86
325 355 8.379331 AGAAGAAGAATTAAGTAACCAGAAGCT 58.621 33.333 0.00 0.00 0.00 3.74
326 356 7.913674 AGAAGAATTAAGTAACCAGAAGCTG 57.086 36.000 0.00 0.00 0.00 4.24
362 393 1.463674 AAAAGACCATCCATCACCGC 58.536 50.000 0.00 0.00 0.00 5.68
370 401 1.939934 CATCCATCACCGCGTTTATGT 59.060 47.619 4.92 0.00 0.00 2.29
388 419 3.226346 TGTCGGTAGCTTGACACATAC 57.774 47.619 10.89 0.00 40.02 2.39
389 420 2.823747 TGTCGGTAGCTTGACACATACT 59.176 45.455 10.89 0.00 40.02 2.12
390 421 3.119602 TGTCGGTAGCTTGACACATACTC 60.120 47.826 10.89 0.00 40.02 2.59
391 422 2.426024 TCGGTAGCTTGACACATACTCC 59.574 50.000 0.00 0.00 0.00 3.85
392 423 2.165641 CGGTAGCTTGACACATACTCCA 59.834 50.000 0.00 0.00 0.00 3.86
393 424 3.181475 CGGTAGCTTGACACATACTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
394 425 4.372656 GGTAGCTTGACACATACTCCATC 58.627 47.826 0.00 0.00 0.00 3.51
395 426 3.550437 AGCTTGACACATACTCCATCC 57.450 47.619 0.00 0.00 0.00 3.51
396 427 2.159043 AGCTTGACACATACTCCATCCG 60.159 50.000 0.00 0.00 0.00 4.18
397 428 2.418746 GCTTGACACATACTCCATCCGT 60.419 50.000 0.00 0.00 0.00 4.69
398 429 3.861840 CTTGACACATACTCCATCCGTT 58.138 45.455 0.00 0.00 0.00 4.44
399 430 3.520290 TGACACATACTCCATCCGTTC 57.480 47.619 0.00 0.00 0.00 3.95
400 431 2.167693 TGACACATACTCCATCCGTTCC 59.832 50.000 0.00 0.00 0.00 3.62
401 432 2.167693 GACACATACTCCATCCGTTCCA 59.832 50.000 0.00 0.00 0.00 3.53
402 433 2.771943 ACACATACTCCATCCGTTCCAT 59.228 45.455 0.00 0.00 0.00 3.41
403 434 3.964688 ACACATACTCCATCCGTTCCATA 59.035 43.478 0.00 0.00 0.00 2.74
404 435 4.202223 ACACATACTCCATCCGTTCCATAC 60.202 45.833 0.00 0.00 0.00 2.39
405 436 4.039245 CACATACTCCATCCGTTCCATACT 59.961 45.833 0.00 0.00 0.00 2.12
406 437 5.243060 CACATACTCCATCCGTTCCATACTA 59.757 44.000 0.00 0.00 0.00 1.82
407 438 5.243283 ACATACTCCATCCGTTCCATACTAC 59.757 44.000 0.00 0.00 0.00 2.73
408 439 3.912248 ACTCCATCCGTTCCATACTACT 58.088 45.455 0.00 0.00 0.00 2.57
409 440 5.057843 ACTCCATCCGTTCCATACTACTA 57.942 43.478 0.00 0.00 0.00 1.82
410 441 5.452255 ACTCCATCCGTTCCATACTACTAA 58.548 41.667 0.00 0.00 0.00 2.24
411 442 5.895534 ACTCCATCCGTTCCATACTACTAAA 59.104 40.000 0.00 0.00 0.00 1.85
412 443 6.553852 ACTCCATCCGTTCCATACTACTAAAT 59.446 38.462 0.00 0.00 0.00 1.40
413 444 6.989659 TCCATCCGTTCCATACTACTAAATC 58.010 40.000 0.00 0.00 0.00 2.17
414 445 6.551975 TCCATCCGTTCCATACTACTAAATCA 59.448 38.462 0.00 0.00 0.00 2.57
415 446 6.868864 CCATCCGTTCCATACTACTAAATCAG 59.131 42.308 0.00 0.00 0.00 2.90
416 447 5.839621 TCCGTTCCATACTACTAAATCAGC 58.160 41.667 0.00 0.00 0.00 4.26
417 448 4.680110 CCGTTCCATACTACTAAATCAGCG 59.320 45.833 0.00 0.00 0.00 5.18
418 449 5.506815 CCGTTCCATACTACTAAATCAGCGA 60.507 44.000 0.00 0.00 0.00 4.93
419 450 5.398711 CGTTCCATACTACTAAATCAGCGAC 59.601 44.000 0.00 0.00 0.00 5.19
420 451 6.270815 GTTCCATACTACTAAATCAGCGACA 58.729 40.000 0.00 0.00 0.00 4.35
421 452 6.459670 TCCATACTACTAAATCAGCGACAA 57.540 37.500 0.00 0.00 0.00 3.18
422 453 6.504398 TCCATACTACTAAATCAGCGACAAG 58.496 40.000 0.00 0.00 0.00 3.16
423 454 6.096423 TCCATACTACTAAATCAGCGACAAGT 59.904 38.462 0.00 0.00 0.00 3.16
424 455 7.283807 TCCATACTACTAAATCAGCGACAAGTA 59.716 37.037 0.00 0.00 0.00 2.24
425 456 8.082852 CCATACTACTAAATCAGCGACAAGTAT 58.917 37.037 0.00 0.00 0.00 2.12
434 465 8.902540 AAATCAGCGACAAGTATAAATATGGA 57.097 30.769 0.00 0.00 0.00 3.41
435 466 8.902540 AATCAGCGACAAGTATAAATATGGAA 57.097 30.769 0.00 0.00 0.00 3.53
436 467 7.709269 TCAGCGACAAGTATAAATATGGAAC 57.291 36.000 0.00 0.00 0.00 3.62
563 600 1.322538 CCATAAGGTGCAACAGCCCC 61.323 60.000 3.64 0.00 39.98 5.80
602 640 1.279271 AGGGAACACAATTCGGAGAGG 59.721 52.381 0.00 0.00 38.43 3.69
733 846 0.612744 GGCTGAAGGAACTCTGAGCT 59.387 55.000 4.19 0.00 38.49 4.09
778 891 0.761702 TCCCATCGGTAAGGGCCTAC 60.762 60.000 6.41 5.50 45.07 3.18
869 990 4.037446 AGACTAGATCCGAGCTGTTTGATC 59.963 45.833 0.00 0.00 35.05 2.92
894 1015 8.370940 TCCCATCAGTTGAATGAGATAGATAAC 58.629 37.037 0.00 0.00 31.44 1.89
1066 1712 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
1067 1713 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
1068 1714 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
1069 1715 2.018086 AGGAGGAGGAGGAGGAGGG 61.018 68.421 0.00 0.00 0.00 4.30
1070 1716 2.123033 GAGGAGGAGGAGGAGGGC 60.123 72.222 0.00 0.00 0.00 5.19
1132 1778 6.094742 GCTTCCATACGAGATGATCATAGAGA 59.905 42.308 8.54 0.00 0.00 3.10
1146 1792 3.453717 TCATAGAGATTCTGCAGTGGCTT 59.546 43.478 14.67 0.00 41.91 4.35
1173 1819 0.895530 AATCCGTCTTCCGCTTCAGA 59.104 50.000 0.00 0.00 34.38 3.27
1238 1884 2.665000 CCGCCTCCACATGTCAGT 59.335 61.111 0.00 0.00 0.00 3.41
1314 1960 2.444624 CGCCACATTCGACTCCACG 61.445 63.158 0.00 0.00 0.00 4.94
1356 2011 1.022982 CGCCATCATCATCATCGGGG 61.023 60.000 0.00 0.00 0.00 5.73
1424 2079 0.875059 GGCAACTGTGTGGAAGTAGC 59.125 55.000 0.00 0.00 0.00 3.58
1431 2086 2.879462 GTGGAAGTAGCGACGCCG 60.879 66.667 17.79 0.00 39.16 6.46
1473 2128 0.180642 TCCTCTATGACGCTCTCGGT 59.819 55.000 0.00 0.00 40.69 4.69
1475 2130 0.309302 CTCTATGACGCTCTCGGTGG 59.691 60.000 0.00 0.00 40.69 4.61
2179 2856 2.099263 TCGCCAAGGAAGAAGATAGTCG 59.901 50.000 0.00 0.00 0.00 4.18
2440 8222 0.393537 CCTCCCAGCTAAAGCAGTGG 60.394 60.000 4.54 4.11 45.16 4.00
2576 8358 2.983725 AAGGGCACTGGACAGTTGGC 62.984 60.000 1.49 10.28 40.20 4.52
2587 8369 2.430694 GGACAGTTGGCCTTCAGTTTTT 59.569 45.455 3.32 0.00 41.12 1.94
2605 8387 7.015098 TCAGTTTTTCTCCCTTGAATAAATGCA 59.985 33.333 0.00 0.00 35.03 3.96
2632 8414 5.900865 AGAAGCTCCTAGTAACAGTACAC 57.099 43.478 0.00 0.00 32.12 2.90
2640 8422 7.626028 GCTCCTAGTAACAGTACACTACTTGAC 60.626 44.444 0.00 0.00 36.76 3.18
2688 10238 2.555227 CCATGGGCTGAACTTGGTAAGT 60.555 50.000 2.85 0.00 45.46 2.24
2745 10295 0.690762 GTTTCCACAGGGGCTACTCA 59.309 55.000 0.00 0.00 36.21 3.41
3105 10670 0.482446 ATGTTGTCCCTTGCCCTTCA 59.518 50.000 0.00 0.00 0.00 3.02
3138 10703 1.810151 TGGAATAGCAGAAACCGTTGC 59.190 47.619 0.00 0.00 40.57 4.17
3240 10805 4.740822 GAGCGTGGCCAATGGGGT 62.741 66.667 7.24 2.29 39.65 4.95
3248 10813 0.106015 GGCCAATGGGGTAGAGCATT 60.106 55.000 0.00 0.00 39.65 3.56
3267 10832 1.522668 TCACAATTCACCTGGAAGCG 58.477 50.000 0.00 0.00 39.30 4.68
3320 10885 2.290832 TGGTGCCATTAGCTGTTGATCA 60.291 45.455 0.00 0.00 44.23 2.92
3478 12799 6.748333 TTCTTGATATGCCTTCAACTTCAG 57.252 37.500 0.00 0.00 0.00 3.02
3626 12947 5.234757 CCAAGAAACAATTGTTGTGGTGATG 59.765 40.000 26.28 17.89 44.59 3.07
3633 12954 6.286758 ACAATTGTTGTGGTGATGCATTTTA 58.713 32.000 4.92 0.00 43.48 1.52
3642 12963 2.923020 GTGATGCATTTTAAAGGCACCG 59.077 45.455 19.06 0.00 40.83 4.94
3661 12986 6.430451 GCACCGACCTTCTTTATATGAAATG 58.570 40.000 0.00 0.00 0.00 2.32
3821 13152 4.689612 ATCTGCACAAATACGAGGGTAT 57.310 40.909 0.00 0.00 41.09 2.73
3824 13155 5.353938 TCTGCACAAATACGAGGGTATTAC 58.646 41.667 0.00 0.00 46.12 1.89
3825 13156 4.444536 TGCACAAATACGAGGGTATTACC 58.555 43.478 4.11 4.11 46.12 2.85
3828 13159 6.183360 TGCACAAATACGAGGGTATTACCATA 60.183 38.462 14.71 2.24 46.12 2.74
3829 13160 6.707161 GCACAAATACGAGGGTATTACCATAA 59.293 38.462 14.71 0.00 46.12 1.90
3830 13161 7.389607 GCACAAATACGAGGGTATTACCATAAT 59.610 37.037 14.71 2.20 46.12 1.28
3831 13162 9.932207 CACAAATACGAGGGTATTACCATAATA 57.068 33.333 14.71 4.28 46.12 0.98
3908 13262 4.853468 TGGAGGTGCCATATTCAGTTTA 57.147 40.909 0.00 0.00 43.33 2.01
3909 13263 4.523083 TGGAGGTGCCATATTCAGTTTAC 58.477 43.478 0.00 0.00 43.33 2.01
3912 13266 4.270008 AGGTGCCATATTCAGTTTACCAC 58.730 43.478 0.00 0.00 0.00 4.16
3941 13333 3.157087 ACAAAATACTTGCTGGTCCTGG 58.843 45.455 0.00 0.00 0.00 4.45
3949 13341 1.619654 TGCTGGTCCTGGAAAACATG 58.380 50.000 0.00 0.00 0.00 3.21
3950 13342 1.133513 TGCTGGTCCTGGAAAACATGT 60.134 47.619 0.00 0.00 0.00 3.21
3953 13345 3.559171 GCTGGTCCTGGAAAACATGTAGA 60.559 47.826 0.00 0.00 0.00 2.59
3954 13346 4.003648 CTGGTCCTGGAAAACATGTAGAC 58.996 47.826 0.00 0.00 0.00 2.59
4003 13519 7.578310 TTATTATGTACGAGCTGTAAGACCT 57.422 36.000 0.00 0.00 34.07 3.85
4009 13525 1.337260 CGAGCTGTAAGACCTGTGCTT 60.337 52.381 0.00 0.00 34.07 3.91
4010 13526 2.772287 GAGCTGTAAGACCTGTGCTTT 58.228 47.619 0.00 0.00 34.07 3.51
4011 13527 2.739379 GAGCTGTAAGACCTGTGCTTTC 59.261 50.000 0.00 0.00 34.07 2.62
4012 13528 1.807142 GCTGTAAGACCTGTGCTTTCC 59.193 52.381 0.00 0.00 34.07 3.13
4014 13530 3.744660 CTGTAAGACCTGTGCTTTCCTT 58.255 45.455 0.00 0.00 34.07 3.36
4017 13533 4.578928 TGTAAGACCTGTGCTTTCCTTTTC 59.421 41.667 0.00 0.00 0.00 2.29
4019 13535 3.481453 AGACCTGTGCTTTCCTTTTCTC 58.519 45.455 0.00 0.00 0.00 2.87
4021 13537 3.885901 GACCTGTGCTTTCCTTTTCTCTT 59.114 43.478 0.00 0.00 0.00 2.85
4023 13539 5.635120 ACCTGTGCTTTCCTTTTCTCTTAT 58.365 37.500 0.00 0.00 0.00 1.73
4026 13542 6.128063 CCTGTGCTTTCCTTTTCTCTTATCTG 60.128 42.308 0.00 0.00 0.00 2.90
4028 13544 7.450074 TGTGCTTTCCTTTTCTCTTATCTGTA 58.550 34.615 0.00 0.00 0.00 2.74
4029 13545 8.103305 TGTGCTTTCCTTTTCTCTTATCTGTAT 58.897 33.333 0.00 0.00 0.00 2.29
4030 13546 9.601217 GTGCTTTCCTTTTCTCTTATCTGTATA 57.399 33.333 0.00 0.00 0.00 1.47
4076 13592 2.474735 CGCCCAATTTTTCAGAAAACGG 59.525 45.455 7.89 8.92 37.56 4.44
4079 13595 4.025229 GCCCAATTTTTCAGAAAACGGTTC 60.025 41.667 7.89 0.00 37.56 3.62
4096 13612 0.034186 TTCGGCAGATCCAATGGCTT 60.034 50.000 0.00 0.00 40.84 4.35
4097 13613 0.749091 TCGGCAGATCCAATGGCTTG 60.749 55.000 0.00 0.00 40.84 4.01
4153 13669 5.686650 CGGCCTGGATTTACCTTACACTATT 60.687 44.000 0.00 0.00 39.86 1.73
4192 13708 2.622436 CCAGTACTGGTTAAGCTCAGC 58.378 52.381 30.57 0.00 45.53 4.26
4193 13709 2.028112 CCAGTACTGGTTAAGCTCAGCA 60.028 50.000 30.57 0.00 45.53 4.41
4194 13710 3.557054 CCAGTACTGGTTAAGCTCAGCAA 60.557 47.826 30.57 0.00 45.53 3.91
4195 13711 4.256920 CAGTACTGGTTAAGCTCAGCAAT 58.743 43.478 15.49 0.00 34.57 3.56
4196 13712 4.697352 CAGTACTGGTTAAGCTCAGCAATT 59.303 41.667 15.49 0.00 34.57 2.32
4197 13713 4.697352 AGTACTGGTTAAGCTCAGCAATTG 59.303 41.667 0.00 0.00 34.57 2.32
4198 13714 3.490348 ACTGGTTAAGCTCAGCAATTGT 58.510 40.909 7.40 0.00 34.57 2.71
4199 13715 4.651778 ACTGGTTAAGCTCAGCAATTGTA 58.348 39.130 7.40 0.00 34.57 2.41
4200 13716 4.455877 ACTGGTTAAGCTCAGCAATTGTAC 59.544 41.667 7.40 0.00 34.57 2.90
4201 13717 4.393834 TGGTTAAGCTCAGCAATTGTACA 58.606 39.130 7.40 0.00 0.00 2.90
4202 13718 5.009631 TGGTTAAGCTCAGCAATTGTACAT 58.990 37.500 7.40 0.00 0.00 2.29
4203 13719 6.176896 TGGTTAAGCTCAGCAATTGTACATA 58.823 36.000 7.40 0.00 0.00 2.29
4204 13720 6.316140 TGGTTAAGCTCAGCAATTGTACATAG 59.684 38.462 7.40 0.00 0.00 2.23
4205 13721 4.889832 AAGCTCAGCAATTGTACATAGC 57.110 40.909 7.40 9.30 0.00 2.97
4206 13722 3.877559 AGCTCAGCAATTGTACATAGCA 58.122 40.909 7.40 0.00 0.00 3.49
4207 13723 4.458397 AGCTCAGCAATTGTACATAGCAT 58.542 39.130 7.40 0.00 0.00 3.79
4208 13724 4.275196 AGCTCAGCAATTGTACATAGCATG 59.725 41.667 7.40 10.50 0.00 4.06
4209 13725 4.274214 GCTCAGCAATTGTACATAGCATGA 59.726 41.667 7.40 13.04 0.00 3.07
4210 13726 5.739752 TCAGCAATTGTACATAGCATGAC 57.260 39.130 7.40 0.00 0.00 3.06
4211 13727 5.184711 TCAGCAATTGTACATAGCATGACA 58.815 37.500 7.40 0.00 0.00 3.58
4212 13728 5.647225 TCAGCAATTGTACATAGCATGACAA 59.353 36.000 7.40 0.00 35.97 3.18
4213 13729 6.150809 TCAGCAATTGTACATAGCATGACAAA 59.849 34.615 7.40 0.00 35.53 2.83
4214 13730 6.807720 CAGCAATTGTACATAGCATGACAAAA 59.192 34.615 7.40 0.00 35.53 2.44
4215 13731 7.328982 CAGCAATTGTACATAGCATGACAAAAA 59.671 33.333 7.40 0.00 35.53 1.94
4234 13750 4.388577 AAAAAGTAGCCCAGTTCCATCT 57.611 40.909 0.00 0.00 0.00 2.90
4235 13751 5.514500 AAAAAGTAGCCCAGTTCCATCTA 57.486 39.130 0.00 0.00 0.00 1.98
4236 13752 5.514500 AAAAGTAGCCCAGTTCCATCTAA 57.486 39.130 0.00 0.00 0.00 2.10
4237 13753 5.717119 AAAGTAGCCCAGTTCCATCTAAT 57.283 39.130 0.00 0.00 0.00 1.73
4238 13754 4.696479 AGTAGCCCAGTTCCATCTAATG 57.304 45.455 0.00 0.00 0.00 1.90
4239 13755 4.040755 AGTAGCCCAGTTCCATCTAATGT 58.959 43.478 0.00 0.00 0.00 2.71
4240 13756 4.475016 AGTAGCCCAGTTCCATCTAATGTT 59.525 41.667 0.00 0.00 0.00 2.71
4241 13757 3.624777 AGCCCAGTTCCATCTAATGTTG 58.375 45.455 0.00 0.00 0.00 3.33
4242 13758 2.099756 GCCCAGTTCCATCTAATGTTGC 59.900 50.000 0.00 0.00 0.00 4.17
4243 13759 3.355378 CCCAGTTCCATCTAATGTTGCA 58.645 45.455 0.00 0.00 0.00 4.08
4244 13760 3.956199 CCCAGTTCCATCTAATGTTGCAT 59.044 43.478 0.00 0.00 0.00 3.96
4245 13761 5.132502 CCCAGTTCCATCTAATGTTGCATA 58.867 41.667 0.00 0.00 0.00 3.14
4246 13762 5.240183 CCCAGTTCCATCTAATGTTGCATAG 59.760 44.000 0.00 0.00 0.00 2.23
4247 13763 5.824624 CCAGTTCCATCTAATGTTGCATAGT 59.175 40.000 0.00 0.00 0.00 2.12
4248 13764 6.017605 CCAGTTCCATCTAATGTTGCATAGTC 60.018 42.308 0.00 0.00 0.00 2.59
4249 13765 6.539826 CAGTTCCATCTAATGTTGCATAGTCA 59.460 38.462 0.00 0.00 0.00 3.41
4250 13766 7.228108 CAGTTCCATCTAATGTTGCATAGTCAT 59.772 37.037 0.00 0.00 0.00 3.06
4251 13767 7.776969 AGTTCCATCTAATGTTGCATAGTCATT 59.223 33.333 0.00 0.00 36.12 2.57
4252 13768 7.734924 TCCATCTAATGTTGCATAGTCATTC 57.265 36.000 9.16 0.00 34.35 2.67
4253 13769 6.712095 TCCATCTAATGTTGCATAGTCATTCC 59.288 38.462 9.16 0.00 34.35 3.01
4254 13770 6.072286 CCATCTAATGTTGCATAGTCATTCCC 60.072 42.308 9.16 0.00 34.35 3.97
4255 13771 5.376625 TCTAATGTTGCATAGTCATTCCCC 58.623 41.667 9.16 0.00 34.35 4.81
4256 13772 3.668141 ATGTTGCATAGTCATTCCCCA 57.332 42.857 0.00 0.00 0.00 4.96
4257 13773 3.003394 TGTTGCATAGTCATTCCCCAG 57.997 47.619 0.00 0.00 0.00 4.45
4258 13774 2.308570 TGTTGCATAGTCATTCCCCAGT 59.691 45.455 0.00 0.00 0.00 4.00
4259 13775 3.521531 TGTTGCATAGTCATTCCCCAGTA 59.478 43.478 0.00 0.00 0.00 2.74
4260 13776 4.165950 TGTTGCATAGTCATTCCCCAGTAT 59.834 41.667 0.00 0.00 0.00 2.12
4261 13777 5.133221 GTTGCATAGTCATTCCCCAGTATT 58.867 41.667 0.00 0.00 0.00 1.89
4262 13778 4.717877 TGCATAGTCATTCCCCAGTATTG 58.282 43.478 0.00 0.00 0.00 1.90
4263 13779 4.165950 TGCATAGTCATTCCCCAGTATTGT 59.834 41.667 0.00 0.00 0.00 2.71
4264 13780 4.516698 GCATAGTCATTCCCCAGTATTGTG 59.483 45.833 0.00 0.00 0.00 3.33
4265 13781 5.687441 GCATAGTCATTCCCCAGTATTGTGA 60.687 44.000 0.00 0.00 0.00 3.58
4266 13782 4.494091 AGTCATTCCCCAGTATTGTGAG 57.506 45.455 0.00 0.00 0.00 3.51
4267 13783 4.104086 AGTCATTCCCCAGTATTGTGAGA 58.896 43.478 0.00 0.00 0.00 3.27
4268 13784 4.163078 AGTCATTCCCCAGTATTGTGAGAG 59.837 45.833 0.00 0.00 0.00 3.20
4269 13785 3.118261 TCATTCCCCAGTATTGTGAGAGC 60.118 47.826 0.00 0.00 0.00 4.09
4270 13786 2.254152 TCCCCAGTATTGTGAGAGCT 57.746 50.000 0.00 0.00 0.00 4.09
4271 13787 1.833630 TCCCCAGTATTGTGAGAGCTG 59.166 52.381 0.00 0.00 0.00 4.24
4272 13788 1.134280 CCCCAGTATTGTGAGAGCTGG 60.134 57.143 0.00 0.00 44.51 4.85
4273 13789 1.661341 CCAGTATTGTGAGAGCTGGC 58.339 55.000 0.00 0.00 39.97 4.85
4274 13790 1.661341 CAGTATTGTGAGAGCTGGCC 58.339 55.000 0.00 0.00 0.00 5.36
4275 13791 1.209019 CAGTATTGTGAGAGCTGGCCT 59.791 52.381 3.32 0.00 0.00 5.19
4276 13792 1.484240 AGTATTGTGAGAGCTGGCCTC 59.516 52.381 3.32 0.00 41.07 4.70
4277 13793 0.833287 TATTGTGAGAGCTGGCCTCC 59.167 55.000 3.32 0.00 41.74 4.30
4278 13794 0.913451 ATTGTGAGAGCTGGCCTCCT 60.913 55.000 3.32 0.00 41.74 3.69
4279 13795 0.252239 TTGTGAGAGCTGGCCTCCTA 60.252 55.000 3.32 0.00 41.74 2.94
4280 13796 0.252239 TGTGAGAGCTGGCCTCCTAA 60.252 55.000 3.32 0.00 41.74 2.69
4281 13797 0.176910 GTGAGAGCTGGCCTCCTAAC 59.823 60.000 3.32 0.00 41.74 2.34
4282 13798 0.252239 TGAGAGCTGGCCTCCTAACA 60.252 55.000 3.32 1.41 41.74 2.41
4283 13799 0.905357 GAGAGCTGGCCTCCTAACAA 59.095 55.000 3.32 0.00 41.74 2.83
4284 13800 0.615850 AGAGCTGGCCTCCTAACAAC 59.384 55.000 3.32 0.00 41.74 3.32
4285 13801 0.324943 GAGCTGGCCTCCTAACAACA 59.675 55.000 3.32 0.00 34.35 3.33
4286 13802 0.326264 AGCTGGCCTCCTAACAACAG 59.674 55.000 3.32 0.00 0.00 3.16
4287 13803 1.308783 GCTGGCCTCCTAACAACAGC 61.309 60.000 3.32 0.00 43.50 4.40
4288 13804 0.036732 CTGGCCTCCTAACAACAGCA 59.963 55.000 3.32 0.00 0.00 4.41
4289 13805 0.476338 TGGCCTCCTAACAACAGCAA 59.524 50.000 3.32 0.00 0.00 3.91
4290 13806 0.881796 GGCCTCCTAACAACAGCAAC 59.118 55.000 0.00 0.00 0.00 4.17
4291 13807 1.545651 GGCCTCCTAACAACAGCAACT 60.546 52.381 0.00 0.00 0.00 3.16
4292 13808 2.230660 GCCTCCTAACAACAGCAACTT 58.769 47.619 0.00 0.00 0.00 2.66
4293 13809 2.030805 GCCTCCTAACAACAGCAACTTG 60.031 50.000 0.00 0.00 0.00 3.16
4294 13810 2.030805 CCTCCTAACAACAGCAACTTGC 60.031 50.000 5.55 5.55 45.46 4.01
4305 13821 2.927553 GCAACTTGCTGAACATAGGG 57.072 50.000 6.50 0.00 40.96 3.53
4306 13822 1.135286 GCAACTTGCTGAACATAGGGC 60.135 52.381 6.50 0.00 40.96 5.19
4307 13823 2.161855 CAACTTGCTGAACATAGGGCA 58.838 47.619 0.00 0.00 0.00 5.36
4308 13824 2.756760 CAACTTGCTGAACATAGGGCAT 59.243 45.455 0.00 0.00 34.59 4.40
4309 13825 3.931907 ACTTGCTGAACATAGGGCATA 57.068 42.857 0.00 0.00 34.59 3.14
4310 13826 4.235079 ACTTGCTGAACATAGGGCATAA 57.765 40.909 0.00 0.00 34.59 1.90
4311 13827 4.202441 ACTTGCTGAACATAGGGCATAAG 58.798 43.478 0.00 0.00 34.59 1.73
4312 13828 4.080356 ACTTGCTGAACATAGGGCATAAGA 60.080 41.667 0.00 0.00 34.59 2.10
4313 13829 4.712051 TGCTGAACATAGGGCATAAGAT 57.288 40.909 0.00 0.00 0.00 2.40
4314 13830 5.052693 TGCTGAACATAGGGCATAAGATT 57.947 39.130 0.00 0.00 0.00 2.40
4315 13831 6.186420 TGCTGAACATAGGGCATAAGATTA 57.814 37.500 0.00 0.00 0.00 1.75
4316 13832 6.782986 TGCTGAACATAGGGCATAAGATTAT 58.217 36.000 0.00 0.00 0.00 1.28
4317 13833 7.233632 TGCTGAACATAGGGCATAAGATTATT 58.766 34.615 0.00 0.00 0.00 1.40
4318 13834 7.175467 TGCTGAACATAGGGCATAAGATTATTG 59.825 37.037 0.00 0.00 0.00 1.90
4319 13835 7.175641 GCTGAACATAGGGCATAAGATTATTGT 59.824 37.037 0.00 0.00 0.00 2.71
4320 13836 8.394971 TGAACATAGGGCATAAGATTATTGTG 57.605 34.615 0.00 0.00 0.00 3.33
4321 13837 8.217111 TGAACATAGGGCATAAGATTATTGTGA 58.783 33.333 0.00 0.00 0.00 3.58
4322 13838 8.995027 AACATAGGGCATAAGATTATTGTGAA 57.005 30.769 0.00 0.00 0.00 3.18
4323 13839 9.592196 AACATAGGGCATAAGATTATTGTGAAT 57.408 29.630 0.00 0.00 0.00 2.57
4324 13840 9.236006 ACATAGGGCATAAGATTATTGTGAATC 57.764 33.333 0.00 0.00 36.28 2.52
4325 13841 8.680903 CATAGGGCATAAGATTATTGTGAATCC 58.319 37.037 0.00 0.00 36.63 3.01
4326 13842 6.856757 AGGGCATAAGATTATTGTGAATCCT 58.143 36.000 0.00 0.00 36.63 3.24
4327 13843 6.718454 AGGGCATAAGATTATTGTGAATCCTG 59.282 38.462 0.00 0.00 36.63 3.86
4328 13844 6.385033 GGCATAAGATTATTGTGAATCCTGC 58.615 40.000 0.00 0.00 36.63 4.85
4329 13845 6.016024 GGCATAAGATTATTGTGAATCCTGCA 60.016 38.462 13.38 0.00 37.65 4.41
4330 13846 7.309621 GGCATAAGATTATTGTGAATCCTGCAT 60.310 37.037 13.38 0.00 37.65 3.96
4331 13847 7.541091 GCATAAGATTATTGTGAATCCTGCATG 59.459 37.037 0.00 0.00 36.83 4.06
4332 13848 6.401047 AAGATTATTGTGAATCCTGCATGG 57.599 37.500 0.00 0.00 36.63 3.66
4343 13859 3.836365 TCCTGCATGGATATTCGTCAA 57.164 42.857 0.00 0.00 40.56 3.18
4344 13860 3.732212 TCCTGCATGGATATTCGTCAAG 58.268 45.455 0.00 0.00 40.56 3.02
4345 13861 2.810274 CCTGCATGGATATTCGTCAAGG 59.190 50.000 0.00 0.00 38.35 3.61
4346 13862 3.470709 CTGCATGGATATTCGTCAAGGT 58.529 45.455 0.00 0.00 0.00 3.50
4347 13863 4.503123 CCTGCATGGATATTCGTCAAGGTA 60.503 45.833 0.00 0.00 38.35 3.08
4348 13864 5.227569 TGCATGGATATTCGTCAAGGTAT 57.772 39.130 0.00 0.00 0.00 2.73
4349 13865 5.237815 TGCATGGATATTCGTCAAGGTATC 58.762 41.667 0.00 0.00 0.00 2.24
4350 13866 4.631813 GCATGGATATTCGTCAAGGTATCC 59.368 45.833 0.00 0.00 41.81 2.59
4352 13868 5.209818 TGGATATTCGTCAAGGTATCCAC 57.790 43.478 8.47 0.00 44.56 4.02
4353 13869 4.039973 TGGATATTCGTCAAGGTATCCACC 59.960 45.833 8.47 0.00 44.56 4.61
4367 13883 3.727258 CACCCGGATGAGCCCCAA 61.727 66.667 0.73 0.00 0.00 4.12
4368 13884 3.728373 ACCCGGATGAGCCCCAAC 61.728 66.667 0.73 0.00 0.00 3.77
4369 13885 3.727258 CCCGGATGAGCCCCAACA 61.727 66.667 0.73 0.00 0.00 3.33
4370 13886 2.124570 CCGGATGAGCCCCAACAG 60.125 66.667 0.00 0.00 0.00 3.16
4371 13887 2.124570 CGGATGAGCCCCAACAGG 60.125 66.667 0.00 0.00 0.00 4.00
4372 13888 2.669133 CGGATGAGCCCCAACAGGA 61.669 63.158 0.00 0.00 38.24 3.86
4373 13889 1.077429 GGATGAGCCCCAACAGGAC 60.077 63.158 0.00 0.00 38.24 3.85
4374 13890 1.566298 GGATGAGCCCCAACAGGACT 61.566 60.000 0.00 0.00 38.24 3.85
4375 13891 1.204146 GATGAGCCCCAACAGGACTA 58.796 55.000 0.00 0.00 38.24 2.59
4376 13892 1.139853 GATGAGCCCCAACAGGACTAG 59.860 57.143 0.00 0.00 38.24 2.57
4377 13893 0.909610 TGAGCCCCAACAGGACTAGG 60.910 60.000 0.00 0.00 38.24 3.02
4378 13894 0.617820 GAGCCCCAACAGGACTAGGA 60.618 60.000 0.00 0.00 38.24 2.94
4379 13895 0.910088 AGCCCCAACAGGACTAGGAC 60.910 60.000 0.00 0.00 38.24 3.85
4380 13896 0.910088 GCCCCAACAGGACTAGGACT 60.910 60.000 0.00 0.00 38.24 3.85
4381 13897 1.621622 GCCCCAACAGGACTAGGACTA 60.622 57.143 0.00 0.00 38.24 2.59
4382 13898 2.829023 CCCCAACAGGACTAGGACTAA 58.171 52.381 0.00 0.00 38.24 2.24
4383 13899 3.178865 CCCCAACAGGACTAGGACTAAA 58.821 50.000 0.00 0.00 38.24 1.85
4384 13900 3.197983 CCCCAACAGGACTAGGACTAAAG 59.802 52.174 0.00 0.00 38.24 1.85
4385 13901 3.838903 CCCAACAGGACTAGGACTAAAGT 59.161 47.826 0.00 0.00 38.24 2.66
4386 13902 5.021458 CCCAACAGGACTAGGACTAAAGTA 58.979 45.833 0.00 0.00 38.24 2.24
4387 13903 5.105432 CCCAACAGGACTAGGACTAAAGTAC 60.105 48.000 0.00 0.00 38.24 2.73
4388 13904 5.715753 CCAACAGGACTAGGACTAAAGTACT 59.284 44.000 0.00 0.00 42.92 2.73
4389 13905 6.127675 CCAACAGGACTAGGACTAAAGTACTC 60.128 46.154 0.00 0.00 38.81 2.59
4390 13906 5.508567 ACAGGACTAGGACTAAAGTACTCC 58.491 45.833 0.00 0.00 38.81 3.85
4391 13907 4.888823 CAGGACTAGGACTAAAGTACTCCC 59.111 50.000 0.00 0.00 38.81 4.30
4392 13908 4.795165 AGGACTAGGACTAAAGTACTCCCT 59.205 45.833 0.00 2.07 38.81 4.20
4393 13909 5.103982 AGGACTAGGACTAAAGTACTCCCTC 60.104 48.000 0.00 0.00 38.81 4.30
4394 13910 5.128033 ACTAGGACTAAAGTACTCCCTCC 57.872 47.826 0.00 0.00 38.81 4.30
4395 13911 3.015675 AGGACTAAAGTACTCCCTCCG 57.984 52.381 0.00 0.00 32.73 4.63
4396 13912 2.311243 AGGACTAAAGTACTCCCTCCGT 59.689 50.000 0.00 0.00 32.73 4.69
4397 13913 2.687425 GGACTAAAGTACTCCCTCCGTC 59.313 54.545 0.00 0.00 0.00 4.79
4398 13914 2.687425 GACTAAAGTACTCCCTCCGTCC 59.313 54.545 0.00 0.00 0.00 4.79
4399 13915 1.674962 CTAAAGTACTCCCTCCGTCCG 59.325 57.143 0.00 0.00 0.00 4.79
4400 13916 0.969409 AAAGTACTCCCTCCGTCCGG 60.969 60.000 0.00 0.00 0.00 5.14
4401 13917 1.856539 AAGTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
4402 13918 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
4403 13919 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4404 13920 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4405 13921 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4406 13922 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4407 13923 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4408 13924 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4409 13925 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4410 13926 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4411 13927 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4412 13928 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4413 13929 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
4414 13930 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
4416 13932 3.681593 TCCGGAAATACTTGTCGGAAA 57.318 42.857 0.00 0.00 45.40 3.13
4417 13933 4.005487 TCCGGAAATACTTGTCGGAAAA 57.995 40.909 0.00 0.00 45.40 2.29
4418 13934 4.387598 TCCGGAAATACTTGTCGGAAAAA 58.612 39.130 0.00 0.00 45.40 1.94
4419 13935 5.005094 TCCGGAAATACTTGTCGGAAAAAT 58.995 37.500 0.00 0.00 45.40 1.82
4420 13936 5.092781 CCGGAAATACTTGTCGGAAAAATG 58.907 41.667 0.00 0.00 42.94 2.32
4421 13937 5.092781 CGGAAATACTTGTCGGAAAAATGG 58.907 41.667 0.00 0.00 0.00 3.16
4422 13938 5.106475 CGGAAATACTTGTCGGAAAAATGGA 60.106 40.000 0.00 0.00 0.00 3.41
4423 13939 6.404293 CGGAAATACTTGTCGGAAAAATGGAT 60.404 38.462 0.00 0.00 0.00 3.41
4424 13940 6.751888 GGAAATACTTGTCGGAAAAATGGATG 59.248 38.462 0.00 0.00 0.00 3.51
4425 13941 6.834168 AATACTTGTCGGAAAAATGGATGT 57.166 33.333 0.00 0.00 0.00 3.06
4426 13942 7.931578 AATACTTGTCGGAAAAATGGATGTA 57.068 32.000 0.00 0.00 0.00 2.29
4427 13943 8.519799 AATACTTGTCGGAAAAATGGATGTAT 57.480 30.769 0.00 0.00 0.00 2.29
4428 13944 6.436843 ACTTGTCGGAAAAATGGATGTATC 57.563 37.500 0.00 0.00 0.00 2.24
4429 13945 6.180472 ACTTGTCGGAAAAATGGATGTATCT 58.820 36.000 0.00 0.00 0.00 1.98
4430 13946 7.335627 ACTTGTCGGAAAAATGGATGTATCTA 58.664 34.615 0.00 0.00 0.00 1.98
4431 13947 7.495934 ACTTGTCGGAAAAATGGATGTATCTAG 59.504 37.037 0.00 0.00 0.00 2.43
4432 13948 7.119709 TGTCGGAAAAATGGATGTATCTAGA 57.880 36.000 0.00 0.00 0.00 2.43
4433 13949 7.735917 TGTCGGAAAAATGGATGTATCTAGAT 58.264 34.615 10.73 10.73 0.00 1.98
4434 13950 7.657354 TGTCGGAAAAATGGATGTATCTAGATG 59.343 37.037 15.79 0.00 0.00 2.90
4435 13951 7.657761 GTCGGAAAAATGGATGTATCTAGATGT 59.342 37.037 15.79 1.25 0.00 3.06
4436 13952 8.866093 TCGGAAAAATGGATGTATCTAGATGTA 58.134 33.333 15.79 4.44 0.00 2.29
4437 13953 9.658799 CGGAAAAATGGATGTATCTAGATGTAT 57.341 33.333 15.79 9.11 0.00 2.29
4473 13989 8.160106 AGATACATCCAATTTTATCCACTCTCC 58.840 37.037 0.00 0.00 0.00 3.71
4474 13990 5.126067 ACATCCAATTTTATCCACTCTCCG 58.874 41.667 0.00 0.00 0.00 4.63
4475 13991 5.104527 ACATCCAATTTTATCCACTCTCCGA 60.105 40.000 0.00 0.00 0.00 4.55
4476 13992 4.766375 TCCAATTTTATCCACTCTCCGAC 58.234 43.478 0.00 0.00 0.00 4.79
4477 13993 3.555956 CCAATTTTATCCACTCTCCGACG 59.444 47.826 0.00 0.00 0.00 5.12
4478 13994 4.430007 CAATTTTATCCACTCTCCGACGA 58.570 43.478 0.00 0.00 0.00 4.20
4479 13995 3.777465 TTTTATCCACTCTCCGACGAG 57.223 47.619 0.00 0.00 37.48 4.18
4480 13996 2.414994 TTATCCACTCTCCGACGAGT 57.585 50.000 0.00 1.38 44.72 4.18
4481 13997 3.548745 TTATCCACTCTCCGACGAGTA 57.451 47.619 0.00 0.00 42.10 2.59
4482 13998 2.642154 ATCCACTCTCCGACGAGTAT 57.358 50.000 0.00 0.00 42.10 2.12
4483 13999 2.414994 TCCACTCTCCGACGAGTATT 57.585 50.000 0.00 0.00 42.10 1.89
4484 14000 2.719739 TCCACTCTCCGACGAGTATTT 58.280 47.619 0.00 0.00 42.10 1.40
4485 14001 2.681848 TCCACTCTCCGACGAGTATTTC 59.318 50.000 0.00 0.00 42.10 2.17
4518 14034 7.457024 GGGAGTACCTAAGTAGAATGATCTC 57.543 44.000 0.00 0.00 35.04 2.75
4519 14035 7.235804 GGGAGTACCTAAGTAGAATGATCTCT 58.764 42.308 0.00 0.00 35.04 3.10
4520 14036 7.175990 GGGAGTACCTAAGTAGAATGATCTCTG 59.824 44.444 0.00 0.00 35.04 3.35
4521 14037 7.308951 GGAGTACCTAAGTAGAATGATCTCTGC 60.309 44.444 0.00 0.00 37.10 4.26
4522 14038 7.294584 AGTACCTAAGTAGAATGATCTCTGCT 58.705 38.462 0.00 0.00 39.75 4.24
4523 14039 6.648879 ACCTAAGTAGAATGATCTCTGCTC 57.351 41.667 3.57 0.00 37.40 4.26
4524 14040 6.132658 ACCTAAGTAGAATGATCTCTGCTCA 58.867 40.000 3.57 0.00 37.40 4.26
4525 14041 6.265196 ACCTAAGTAGAATGATCTCTGCTCAG 59.735 42.308 3.57 0.00 37.40 3.35
4526 14042 5.534207 AAGTAGAATGATCTCTGCTCAGG 57.466 43.478 3.57 0.00 37.40 3.86
4527 14043 4.802307 AGTAGAATGATCTCTGCTCAGGA 58.198 43.478 0.00 0.00 33.62 3.86
4528 14044 5.396485 AGTAGAATGATCTCTGCTCAGGAT 58.604 41.667 0.00 0.00 33.62 3.24
4529 14045 4.877378 AGAATGATCTCTGCTCAGGATC 57.123 45.455 15.36 15.36 36.52 3.36
4530 14046 4.485875 AGAATGATCTCTGCTCAGGATCT 58.514 43.478 19.42 8.54 36.72 2.75
4531 14047 4.282449 AGAATGATCTCTGCTCAGGATCTG 59.718 45.833 19.42 0.00 36.72 2.90
4532 14048 3.029483 TGATCTCTGCTCAGGATCTGT 57.971 47.619 19.42 0.00 36.72 3.41
4533 14049 4.176120 TGATCTCTGCTCAGGATCTGTA 57.824 45.455 19.42 6.45 36.72 2.74
4534 14050 3.888323 TGATCTCTGCTCAGGATCTGTAC 59.112 47.826 19.42 0.00 36.72 2.90
4535 14051 2.293170 TCTCTGCTCAGGATCTGTACG 58.707 52.381 0.00 0.00 32.61 3.67
4536 14052 1.336440 CTCTGCTCAGGATCTGTACGG 59.664 57.143 0.00 0.00 32.61 4.02
4537 14053 1.107114 CTGCTCAGGATCTGTACGGT 58.893 55.000 0.64 0.00 32.61 4.83
4538 14054 2.092592 TCTGCTCAGGATCTGTACGGTA 60.093 50.000 0.64 0.00 32.61 4.02
4539 14055 2.292016 CTGCTCAGGATCTGTACGGTAG 59.708 54.545 0.64 0.00 32.61 3.18
4540 14056 2.092592 TGCTCAGGATCTGTACGGTAGA 60.093 50.000 0.64 0.00 32.61 2.59
4541 14057 3.150767 GCTCAGGATCTGTACGGTAGAT 58.849 50.000 0.64 0.00 37.59 1.98
4542 14058 4.202430 TGCTCAGGATCTGTACGGTAGATA 60.202 45.833 0.64 0.00 35.14 1.98
4543 14059 4.944930 GCTCAGGATCTGTACGGTAGATAT 59.055 45.833 0.64 0.00 35.14 1.63
4544 14060 5.065474 GCTCAGGATCTGTACGGTAGATATC 59.935 48.000 0.64 0.00 35.14 1.63
4545 14061 6.123045 TCAGGATCTGTACGGTAGATATCA 57.877 41.667 5.32 0.00 35.14 2.15
4546 14062 5.938710 TCAGGATCTGTACGGTAGATATCAC 59.061 44.000 5.32 1.39 35.14 3.06
4547 14063 4.936411 AGGATCTGTACGGTAGATATCACG 59.064 45.833 5.32 8.98 35.14 4.35
4548 14064 4.094590 GGATCTGTACGGTAGATATCACGG 59.905 50.000 15.60 12.49 35.14 4.94
4549 14065 2.810274 TCTGTACGGTAGATATCACGGC 59.190 50.000 15.60 10.06 0.00 5.68
4550 14066 2.551032 CTGTACGGTAGATATCACGGCA 59.449 50.000 15.60 12.88 0.00 5.69
4551 14067 2.950975 TGTACGGTAGATATCACGGCAA 59.049 45.455 15.60 2.56 0.00 4.52
4552 14068 3.380954 TGTACGGTAGATATCACGGCAAA 59.619 43.478 15.60 0.58 0.00 3.68
4553 14069 3.746045 ACGGTAGATATCACGGCAAAT 57.254 42.857 15.60 0.00 0.00 2.32
4554 14070 4.859304 ACGGTAGATATCACGGCAAATA 57.141 40.909 15.60 0.00 0.00 1.40
4555 14071 5.401531 ACGGTAGATATCACGGCAAATAT 57.598 39.130 15.60 0.00 0.00 1.28
4556 14072 5.408356 ACGGTAGATATCACGGCAAATATC 58.592 41.667 15.60 0.00 35.84 1.63
4557 14073 4.804139 CGGTAGATATCACGGCAAATATCC 59.196 45.833 5.32 0.00 36.10 2.59
4558 14074 5.394224 CGGTAGATATCACGGCAAATATCCT 60.394 44.000 5.32 0.00 36.10 3.24
4559 14075 6.043411 GGTAGATATCACGGCAAATATCCTC 58.957 44.000 5.32 2.84 36.10 3.71
4560 14076 5.745312 AGATATCACGGCAAATATCCTCA 57.255 39.130 5.32 0.00 36.10 3.86
4561 14077 6.114187 AGATATCACGGCAAATATCCTCAA 57.886 37.500 5.32 0.00 36.10 3.02
4562 14078 5.934625 AGATATCACGGCAAATATCCTCAAC 59.065 40.000 5.32 0.00 36.10 3.18
4563 14079 2.276201 TCACGGCAAATATCCTCAACG 58.724 47.619 0.00 0.00 0.00 4.10
4564 14080 2.093921 TCACGGCAAATATCCTCAACGA 60.094 45.455 0.00 0.00 0.00 3.85
4565 14081 2.030457 CACGGCAAATATCCTCAACGAC 59.970 50.000 0.00 0.00 0.00 4.34
4566 14082 2.276201 CGGCAAATATCCTCAACGACA 58.724 47.619 0.00 0.00 0.00 4.35
4567 14083 2.675844 CGGCAAATATCCTCAACGACAA 59.324 45.455 0.00 0.00 0.00 3.18
4568 14084 3.242413 CGGCAAATATCCTCAACGACAAG 60.242 47.826 0.00 0.00 0.00 3.16
4569 14085 3.487544 GGCAAATATCCTCAACGACAAGC 60.488 47.826 0.00 0.00 0.00 4.01
4570 14086 3.375299 GCAAATATCCTCAACGACAAGCT 59.625 43.478 0.00 0.00 0.00 3.74
4571 14087 4.728882 GCAAATATCCTCAACGACAAGCTG 60.729 45.833 0.00 0.00 0.00 4.24
4572 14088 2.010145 TATCCTCAACGACAAGCTGC 57.990 50.000 0.00 0.00 0.00 5.25
4573 14089 0.035317 ATCCTCAACGACAAGCTGCA 59.965 50.000 1.02 0.00 0.00 4.41
4574 14090 0.179059 TCCTCAACGACAAGCTGCAA 60.179 50.000 1.02 0.00 0.00 4.08
4575 14091 0.877071 CCTCAACGACAAGCTGCAAT 59.123 50.000 1.02 0.00 0.00 3.56
4576 14092 2.076100 CCTCAACGACAAGCTGCAATA 58.924 47.619 1.02 0.00 0.00 1.90
4577 14093 2.159653 CCTCAACGACAAGCTGCAATAC 60.160 50.000 1.02 0.00 0.00 1.89
4578 14094 2.480037 CTCAACGACAAGCTGCAATACA 59.520 45.455 1.02 0.00 0.00 2.29
4579 14095 3.073678 TCAACGACAAGCTGCAATACAT 58.926 40.909 1.02 0.00 0.00 2.29
4580 14096 3.501828 TCAACGACAAGCTGCAATACATT 59.498 39.130 1.02 0.00 0.00 2.71
4581 14097 4.693095 TCAACGACAAGCTGCAATACATTA 59.307 37.500 1.02 0.00 0.00 1.90
4582 14098 4.864916 ACGACAAGCTGCAATACATTAG 57.135 40.909 1.02 0.00 0.00 1.73
4583 14099 4.253685 ACGACAAGCTGCAATACATTAGT 58.746 39.130 1.02 0.00 0.00 2.24
4584 14100 4.695455 ACGACAAGCTGCAATACATTAGTT 59.305 37.500 1.02 0.00 0.00 2.24
4585 14101 5.181245 ACGACAAGCTGCAATACATTAGTTT 59.819 36.000 1.02 0.00 0.00 2.66
4586 14102 6.370442 ACGACAAGCTGCAATACATTAGTTTA 59.630 34.615 1.02 0.00 0.00 2.01
4587 14103 7.094975 ACGACAAGCTGCAATACATTAGTTTAA 60.095 33.333 1.02 0.00 0.00 1.52
4588 14104 7.910162 CGACAAGCTGCAATACATTAGTTTAAT 59.090 33.333 1.02 0.00 0.00 1.40
4589 14105 9.573133 GACAAGCTGCAATACATTAGTTTAATT 57.427 29.630 1.02 0.00 0.00 1.40
4590 14106 9.927668 ACAAGCTGCAATACATTAGTTTAATTT 57.072 25.926 1.02 0.00 0.00 1.82
4593 14109 9.793252 AGCTGCAATACATTAGTTTAATTTCAG 57.207 29.630 1.02 0.00 0.00 3.02
4594 14110 9.573133 GCTGCAATACATTAGTTTAATTTCAGT 57.427 29.630 0.00 0.00 0.00 3.41
4607 14123 9.213799 AGTTTAATTTCAGTCAGTTCAGAGATC 57.786 33.333 0.00 0.00 0.00 2.75
4608 14124 9.213799 GTTTAATTTCAGTCAGTTCAGAGATCT 57.786 33.333 0.00 0.00 0.00 2.75
4609 14125 8.994429 TTAATTTCAGTCAGTTCAGAGATCTC 57.006 34.615 15.29 15.29 0.00 2.75
4610 14126 6.602410 ATTTCAGTCAGTTCAGAGATCTCA 57.398 37.500 24.39 1.76 0.00 3.27
4611 14127 6.602410 TTTCAGTCAGTTCAGAGATCTCAT 57.398 37.500 24.39 7.15 0.00 2.90
4612 14128 5.579564 TCAGTCAGTTCAGAGATCTCATG 57.420 43.478 24.39 17.93 0.00 3.07
4613 14129 5.259632 TCAGTCAGTTCAGAGATCTCATGA 58.740 41.667 24.39 19.70 0.00 3.07
4614 14130 5.713861 TCAGTCAGTTCAGAGATCTCATGAA 59.286 40.000 24.39 23.45 0.00 2.57
4623 14139 7.845066 TCAGAGATCTCATGAACATTGAAAG 57.155 36.000 24.39 0.00 0.00 2.62
4624 14140 7.392418 TCAGAGATCTCATGAACATTGAAAGT 58.608 34.615 24.39 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
313 343 7.900782 TGTATTTCTTACAGCTTCTGGTTAC 57.099 36.000 0.00 0.00 35.86 2.50
347 378 1.024579 AAACGCGGTGATGGATGGTC 61.025 55.000 12.47 0.00 0.00 4.02
348 379 0.250793 TAAACGCGGTGATGGATGGT 59.749 50.000 12.47 0.00 0.00 3.55
349 380 1.264020 CATAAACGCGGTGATGGATGG 59.736 52.381 14.15 0.00 0.00 3.51
362 393 3.060363 GTGTCAAGCTACCGACATAAACG 59.940 47.826 14.47 0.00 43.59 3.60
370 401 2.426024 GGAGTATGTGTCAAGCTACCGA 59.574 50.000 0.00 0.00 0.00 4.69
388 419 6.401047 TTTAGTAGTATGGAACGGATGGAG 57.599 41.667 0.00 0.00 0.00 3.86
389 420 6.551975 TGATTTAGTAGTATGGAACGGATGGA 59.448 38.462 0.00 0.00 0.00 3.41
390 421 6.755206 TGATTTAGTAGTATGGAACGGATGG 58.245 40.000 0.00 0.00 0.00 3.51
391 422 6.366332 GCTGATTTAGTAGTATGGAACGGATG 59.634 42.308 0.00 0.00 0.00 3.51
392 423 6.456501 GCTGATTTAGTAGTATGGAACGGAT 58.543 40.000 0.00 0.00 0.00 4.18
393 424 5.506815 CGCTGATTTAGTAGTATGGAACGGA 60.507 44.000 0.00 0.00 0.00 4.69
394 425 4.680110 CGCTGATTTAGTAGTATGGAACGG 59.320 45.833 0.00 0.00 0.00 4.44
395 426 5.398711 GTCGCTGATTTAGTAGTATGGAACG 59.601 44.000 0.00 0.00 0.00 3.95
396 427 6.270815 TGTCGCTGATTTAGTAGTATGGAAC 58.729 40.000 0.00 0.00 0.00 3.62
397 428 6.459670 TGTCGCTGATTTAGTAGTATGGAA 57.540 37.500 0.00 0.00 0.00 3.53
398 429 6.096423 ACTTGTCGCTGATTTAGTAGTATGGA 59.904 38.462 0.00 0.00 0.00 3.41
399 430 6.273825 ACTTGTCGCTGATTTAGTAGTATGG 58.726 40.000 0.00 0.00 0.00 2.74
408 439 9.990360 TCCATATTTATACTTGTCGCTGATTTA 57.010 29.630 0.00 0.00 0.00 1.40
409 440 8.902540 TCCATATTTATACTTGTCGCTGATTT 57.097 30.769 0.00 0.00 0.00 2.17
410 441 8.774586 GTTCCATATTTATACTTGTCGCTGATT 58.225 33.333 0.00 0.00 0.00 2.57
411 442 7.931407 TGTTCCATATTTATACTTGTCGCTGAT 59.069 33.333 0.00 0.00 0.00 2.90
412 443 7.269316 TGTTCCATATTTATACTTGTCGCTGA 58.731 34.615 0.00 0.00 0.00 4.26
413 444 7.438160 TCTGTTCCATATTTATACTTGTCGCTG 59.562 37.037 0.00 0.00 0.00 5.18
414 445 7.497595 TCTGTTCCATATTTATACTTGTCGCT 58.502 34.615 0.00 0.00 0.00 4.93
415 446 7.095607 CCTCTGTTCCATATTTATACTTGTCGC 60.096 40.741 0.00 0.00 0.00 5.19
416 447 7.385205 CCCTCTGTTCCATATTTATACTTGTCG 59.615 40.741 0.00 0.00 0.00 4.35
417 448 8.429641 TCCCTCTGTTCCATATTTATACTTGTC 58.570 37.037 0.00 0.00 0.00 3.18
418 449 8.331931 TCCCTCTGTTCCATATTTATACTTGT 57.668 34.615 0.00 0.00 0.00 3.16
419 450 8.432805 ACTCCCTCTGTTCCATATTTATACTTG 58.567 37.037 0.00 0.00 0.00 3.16
420 451 8.568617 ACTCCCTCTGTTCCATATTTATACTT 57.431 34.615 0.00 0.00 0.00 2.24
421 452 9.670442 TTACTCCCTCTGTTCCATATTTATACT 57.330 33.333 0.00 0.00 0.00 2.12
422 453 9.708092 GTTACTCCCTCTGTTCCATATTTATAC 57.292 37.037 0.00 0.00 0.00 1.47
423 454 8.877195 GGTTACTCCCTCTGTTCCATATTTATA 58.123 37.037 0.00 0.00 0.00 0.98
424 455 7.572861 AGGTTACTCCCTCTGTTCCATATTTAT 59.427 37.037 0.00 0.00 36.75 1.40
425 456 6.906901 AGGTTACTCCCTCTGTTCCATATTTA 59.093 38.462 0.00 0.00 36.75 1.40
426 457 5.731678 AGGTTACTCCCTCTGTTCCATATTT 59.268 40.000 0.00 0.00 36.75 1.40
427 458 5.289510 AGGTTACTCCCTCTGTTCCATATT 58.710 41.667 0.00 0.00 36.75 1.28
428 459 4.897051 AGGTTACTCCCTCTGTTCCATAT 58.103 43.478 0.00 0.00 36.75 1.78
429 460 4.287552 GAGGTTACTCCCTCTGTTCCATA 58.712 47.826 0.00 0.00 46.34 2.74
430 461 3.108376 GAGGTTACTCCCTCTGTTCCAT 58.892 50.000 0.00 0.00 46.34 3.41
431 462 2.537143 GAGGTTACTCCCTCTGTTCCA 58.463 52.381 0.00 0.00 46.34 3.53
506 537 4.743151 GCCTTTCTCCGGTTAAAACAAAAG 59.257 41.667 0.00 1.62 0.00 2.27
510 546 2.882137 CTGCCTTTCTCCGGTTAAAACA 59.118 45.455 0.00 4.28 0.00 2.83
511 547 3.143728 TCTGCCTTTCTCCGGTTAAAAC 58.856 45.455 0.00 0.00 0.00 2.43
575 613 2.159707 CGAATTGTGTTCCCTTACGCTG 60.160 50.000 0.00 0.00 0.00 5.18
869 990 8.152898 TGTTATCTATCTCATTCAACTGATGGG 58.847 37.037 0.00 0.00 0.00 4.00
909 1030 5.275067 TGGGGAAAATCACAACAAGAAAG 57.725 39.130 0.00 0.00 0.00 2.62
1008 1161 2.803285 TGATATCCTCCTCCCTGCTT 57.197 50.000 0.00 0.00 0.00 3.91
1070 1716 3.271706 CTTGCGGTGGCCATGTGTG 62.272 63.158 9.72 0.00 38.85 3.82
1132 1778 0.403271 ACAGGAAGCCACTGCAGAAT 59.597 50.000 23.35 0.00 39.55 2.40
1146 1792 1.067142 CGGAAGACGGATTTGACAGGA 60.067 52.381 0.00 0.00 39.42 3.86
1238 1884 2.046314 GCCTTGCGTCCTTGGCTA 60.046 61.111 0.00 0.00 41.92 3.93
1260 1906 4.208403 AGCTTGGCTGGTGGTGCA 62.208 61.111 0.00 0.00 37.57 4.57
1314 1960 4.509737 GGGCACGAGTAGACCGCC 62.510 72.222 0.00 0.00 42.21 6.13
1356 2011 4.899239 CCACGATCTCTGGGGCGC 62.899 72.222 0.00 0.00 0.00 6.53
1473 2128 3.338249 GTTGCAGATGTAGAAAGCTCCA 58.662 45.455 0.00 0.00 0.00 3.86
1475 2130 2.222908 GCGTTGCAGATGTAGAAAGCTC 60.223 50.000 0.00 0.00 0.00 4.09
2179 2856 3.914312 TCTTGTGCTTGCTAGTAGTGAC 58.086 45.455 0.00 0.00 0.00 3.67
2402 8184 2.712087 AGGCGGAGTAGGATCTCTCTAA 59.288 50.000 10.87 0.00 35.11 2.10
2440 8222 4.829064 TGCAGACAAATTTGGAGTGTAC 57.171 40.909 21.74 5.66 0.00 2.90
2576 8358 7.524717 TTATTCAAGGGAGAAAAACTGAAGG 57.475 36.000 0.00 0.00 0.00 3.46
2587 8369 5.128033 TGGATGCATTTATTCAAGGGAGA 57.872 39.130 0.00 0.00 0.00 3.71
2605 8387 5.026790 ACTGTTACTAGGAGCTTCTTGGAT 58.973 41.667 0.00 0.00 0.00 3.41
2632 8414 4.733523 GCAAACCACCTTTGTGTCAAGTAG 60.734 45.833 0.00 0.00 41.37 2.57
2640 8422 1.110442 TGGAGCAAACCACCTTTGTG 58.890 50.000 0.00 0.00 41.37 3.33
2688 10238 2.036992 GAGATAGTCCCTCGTCTCGGTA 59.963 54.545 0.00 0.00 0.00 4.02
2699 10249 1.204146 TGGGTTGCAGAGATAGTCCC 58.796 55.000 0.00 0.00 0.00 4.46
2745 10295 1.833934 CAGCAAACTTGGCCCCAGT 60.834 57.895 0.00 0.00 0.00 4.00
2781 10346 0.534877 TGCCGACTGTGAAAGCATGT 60.535 50.000 0.00 0.00 0.00 3.21
2945 10510 1.380112 AGAGGTGGTACCGAGCTCC 60.380 63.158 26.30 16.09 44.90 4.70
2988 10553 5.824624 CCAGTACAGCATTCCTTCAACATAT 59.175 40.000 0.00 0.00 0.00 1.78
3035 10600 1.747355 CAATGGTCCATTCACAGCTCC 59.253 52.381 14.54 0.00 31.05 4.70
3105 10670 4.025360 TGCTATTCCATCTTGCAAACCAT 58.975 39.130 0.00 0.00 0.00 3.55
3138 10703 1.130955 GCTCAACAACAAATGCACGG 58.869 50.000 0.00 0.00 0.00 4.94
3227 10792 1.453928 GCTCTACCCCATTGGCCAC 60.454 63.158 3.88 0.00 37.83 5.01
3240 10805 4.019411 TCCAGGTGAATTGTGAATGCTCTA 60.019 41.667 0.00 0.00 0.00 2.43
3248 10813 1.202758 ACGCTTCCAGGTGAATTGTGA 60.203 47.619 0.00 0.00 31.06 3.58
3267 10832 7.598759 TGTCTTAAGGGAATAGTCAGGATAC 57.401 40.000 1.85 0.00 0.00 2.24
3320 10885 1.625818 GCAGGATCCTCCCATAATCGT 59.374 52.381 12.69 0.00 37.19 3.73
3478 12799 2.096496 AGCATGTCAAACTATTCGCTGC 59.904 45.455 0.00 0.00 0.00 5.25
3606 12927 4.118410 TGCATCACCACAACAATTGTTTC 58.882 39.130 21.10 3.49 43.23 2.78
3626 12947 1.544246 AGGTCGGTGCCTTTAAAATGC 59.456 47.619 3.10 3.10 34.71 3.56
3661 12986 5.528690 TGCAGGCAAGATATCACAAATAGAC 59.471 40.000 5.32 0.00 0.00 2.59
3761 13091 9.226606 AGGAACACGTCATTATATTTTGAAAGA 57.773 29.630 0.00 0.00 0.00 2.52
3797 13128 5.036117 ACCCTCGTATTTGTGCAGATAAT 57.964 39.130 0.00 0.00 0.00 1.28
3846 13177 8.721478 GCAGATCAGAAGTATTTTTAACAGACA 58.279 33.333 0.00 0.00 0.00 3.41
3854 13185 8.193438 GCCAAATAGCAGATCAGAAGTATTTTT 58.807 33.333 0.00 0.00 0.00 1.94
3855 13186 7.559170 AGCCAAATAGCAGATCAGAAGTATTTT 59.441 33.333 0.00 0.00 34.23 1.82
3856 13187 7.059156 AGCCAAATAGCAGATCAGAAGTATTT 58.941 34.615 0.00 0.00 34.23 1.40
3858 13189 6.043012 AGAGCCAAATAGCAGATCAGAAGTAT 59.957 38.462 0.00 0.00 34.23 2.12
3859 13190 5.365025 AGAGCCAAATAGCAGATCAGAAGTA 59.635 40.000 0.00 0.00 34.23 2.24
3861 13192 4.706035 AGAGCCAAATAGCAGATCAGAAG 58.294 43.478 0.00 0.00 34.23 2.85
3862 13193 4.767578 AGAGCCAAATAGCAGATCAGAA 57.232 40.909 0.00 0.00 34.23 3.02
3878 13230 2.184579 GCACCTCCACGTAGAGCC 59.815 66.667 5.38 0.00 32.17 4.70
3908 13262 3.832527 AGTATTTTGTTGGAGCAGTGGT 58.167 40.909 0.00 0.00 0.00 4.16
3909 13263 4.549458 CAAGTATTTTGTTGGAGCAGTGG 58.451 43.478 0.00 0.00 0.00 4.00
3912 13266 4.232221 CAGCAAGTATTTTGTTGGAGCAG 58.768 43.478 0.00 0.00 0.00 4.24
3941 13333 7.584987 ACAATGCAAGTAGTCTACATGTTTTC 58.415 34.615 14.86 1.66 30.59 2.29
3949 13341 9.974750 GATAAAAGAACAATGCAAGTAGTCTAC 57.025 33.333 1.39 1.39 0.00 2.59
3950 13342 9.944376 AGATAAAAGAACAATGCAAGTAGTCTA 57.056 29.630 0.00 0.00 0.00 2.59
3953 13345 8.621532 TGAGATAAAAGAACAATGCAAGTAGT 57.378 30.769 0.00 0.00 0.00 2.73
3983 13499 4.095932 CACAGGTCTTACAGCTCGTACATA 59.904 45.833 0.00 0.00 0.00 2.29
3989 13505 0.244994 AGCACAGGTCTTACAGCTCG 59.755 55.000 0.00 0.00 0.00 5.03
3995 13511 4.822350 AGAAAAGGAAAGCACAGGTCTTAC 59.178 41.667 0.00 0.00 0.00 2.34
3997 13513 3.885901 GAGAAAAGGAAAGCACAGGTCTT 59.114 43.478 0.00 0.00 0.00 3.01
4003 13519 6.299141 ACAGATAAGAGAAAAGGAAAGCACA 58.701 36.000 0.00 0.00 0.00 4.57
4029 13545 9.265901 GCTATCTGTAAATCTCTTCAATGCTTA 57.734 33.333 0.00 0.00 0.00 3.09
4030 13546 7.042187 CGCTATCTGTAAATCTCTTCAATGCTT 60.042 37.037 0.00 0.00 0.00 3.91
4031 13547 6.423302 CGCTATCTGTAAATCTCTTCAATGCT 59.577 38.462 0.00 0.00 0.00 3.79
4032 13548 6.588552 CGCTATCTGTAAATCTCTTCAATGC 58.411 40.000 0.00 0.00 0.00 3.56
4033 13549 6.347240 GGCGCTATCTGTAAATCTCTTCAATG 60.347 42.308 7.64 0.00 0.00 2.82
4034 13550 5.698545 GGCGCTATCTGTAAATCTCTTCAAT 59.301 40.000 7.64 0.00 0.00 2.57
4036 13552 4.501571 GGGCGCTATCTGTAAATCTCTTCA 60.502 45.833 7.64 0.00 0.00 3.02
4037 13553 3.991121 GGGCGCTATCTGTAAATCTCTTC 59.009 47.826 7.64 0.00 0.00 2.87
4038 13554 3.388024 TGGGCGCTATCTGTAAATCTCTT 59.612 43.478 7.64 0.00 0.00 2.85
4039 13555 2.965831 TGGGCGCTATCTGTAAATCTCT 59.034 45.455 7.64 0.00 0.00 3.10
4040 13556 3.386768 TGGGCGCTATCTGTAAATCTC 57.613 47.619 7.64 0.00 0.00 2.75
4048 13564 3.378112 TCTGAAAAATTGGGCGCTATCTG 59.622 43.478 7.64 0.00 0.00 2.90
4076 13592 0.749454 AGCCATTGGATCTGCCGAAC 60.749 55.000 6.95 0.00 40.66 3.95
4079 13595 1.731700 CAAGCCATTGGATCTGCCG 59.268 57.895 6.95 0.00 40.66 5.69
4096 13612 4.126437 TCACTTGAAGATGAAACGAAGCA 58.874 39.130 0.00 0.00 0.00 3.91
4097 13613 4.732285 TCACTTGAAGATGAAACGAAGC 57.268 40.909 0.00 0.00 0.00 3.86
4190 13706 6.513806 TTTGTCATGCTATGTACAATTGCT 57.486 33.333 5.05 0.00 33.57 3.91
4191 13707 7.579589 TTTTTGTCATGCTATGTACAATTGC 57.420 32.000 5.05 5.40 33.57 3.56
4213 13729 4.388577 AGATGGAACTGGGCTACTTTTT 57.611 40.909 0.00 0.00 0.00 1.94
4214 13730 5.514500 TTAGATGGAACTGGGCTACTTTT 57.486 39.130 0.00 0.00 0.00 2.27
4215 13731 5.044846 ACATTAGATGGAACTGGGCTACTTT 60.045 40.000 0.00 0.00 33.60 2.66
4216 13732 4.475016 ACATTAGATGGAACTGGGCTACTT 59.525 41.667 0.00 0.00 33.60 2.24
4217 13733 4.040755 ACATTAGATGGAACTGGGCTACT 58.959 43.478 0.00 0.00 33.60 2.57
4218 13734 4.423625 ACATTAGATGGAACTGGGCTAC 57.576 45.455 0.00 0.00 33.60 3.58
4219 13735 4.780815 CAACATTAGATGGAACTGGGCTA 58.219 43.478 0.00 0.00 33.60 3.93
4220 13736 3.624777 CAACATTAGATGGAACTGGGCT 58.375 45.455 0.00 0.00 33.60 5.19
4221 13737 2.099756 GCAACATTAGATGGAACTGGGC 59.900 50.000 0.00 0.00 33.60 5.36
4222 13738 3.355378 TGCAACATTAGATGGAACTGGG 58.645 45.455 0.00 0.00 33.60 4.45
4223 13739 5.824624 ACTATGCAACATTAGATGGAACTGG 59.175 40.000 0.00 0.00 33.60 4.00
4224 13740 6.539826 TGACTATGCAACATTAGATGGAACTG 59.460 38.462 0.00 0.00 33.60 3.16
4225 13741 6.653020 TGACTATGCAACATTAGATGGAACT 58.347 36.000 0.00 0.00 33.60 3.01
4226 13742 6.925610 TGACTATGCAACATTAGATGGAAC 57.074 37.500 0.00 0.00 33.60 3.62
4227 13743 7.229306 GGAATGACTATGCAACATTAGATGGAA 59.771 37.037 0.00 0.00 34.94 3.53
4228 13744 6.712095 GGAATGACTATGCAACATTAGATGGA 59.288 38.462 0.00 0.00 34.94 3.41
4229 13745 6.072286 GGGAATGACTATGCAACATTAGATGG 60.072 42.308 0.00 0.00 34.94 3.51
4230 13746 6.072286 GGGGAATGACTATGCAACATTAGATG 60.072 42.308 0.00 0.00 34.94 2.90
4231 13747 6.006449 GGGGAATGACTATGCAACATTAGAT 58.994 40.000 0.00 0.00 34.94 1.98
4232 13748 5.104151 TGGGGAATGACTATGCAACATTAGA 60.104 40.000 0.00 0.00 34.94 2.10
4233 13749 5.132502 TGGGGAATGACTATGCAACATTAG 58.867 41.667 0.00 0.00 34.94 1.73
4234 13750 5.122707 TGGGGAATGACTATGCAACATTA 57.877 39.130 0.00 0.00 34.94 1.90
4235 13751 3.956199 CTGGGGAATGACTATGCAACATT 59.044 43.478 10.09 10.09 37.03 2.71
4236 13752 3.053395 ACTGGGGAATGACTATGCAACAT 60.053 43.478 0.00 0.00 0.00 2.71
4237 13753 2.308570 ACTGGGGAATGACTATGCAACA 59.691 45.455 0.00 0.00 0.00 3.33
4238 13754 3.004752 ACTGGGGAATGACTATGCAAC 57.995 47.619 0.00 0.00 0.00 4.17
4239 13755 5.132502 CAATACTGGGGAATGACTATGCAA 58.867 41.667 0.00 0.00 0.00 4.08
4240 13756 4.165950 ACAATACTGGGGAATGACTATGCA 59.834 41.667 0.00 0.00 0.00 3.96
4241 13757 4.516698 CACAATACTGGGGAATGACTATGC 59.483 45.833 0.00 0.00 0.00 3.14
4242 13758 5.928976 TCACAATACTGGGGAATGACTATG 58.071 41.667 0.00 0.00 0.00 2.23
4243 13759 5.905331 TCTCACAATACTGGGGAATGACTAT 59.095 40.000 0.00 0.00 0.00 2.12
4244 13760 5.277250 TCTCACAATACTGGGGAATGACTA 58.723 41.667 0.00 0.00 0.00 2.59
4245 13761 4.104086 TCTCACAATACTGGGGAATGACT 58.896 43.478 0.00 0.00 0.00 3.41
4246 13762 4.446371 CTCTCACAATACTGGGGAATGAC 58.554 47.826 0.00 0.00 0.00 3.06
4247 13763 3.118261 GCTCTCACAATACTGGGGAATGA 60.118 47.826 0.00 0.00 0.00 2.57
4248 13764 3.118112 AGCTCTCACAATACTGGGGAATG 60.118 47.826 0.00 0.00 0.00 2.67
4249 13765 3.118112 CAGCTCTCACAATACTGGGGAAT 60.118 47.826 0.00 0.00 0.00 3.01
4250 13766 2.237143 CAGCTCTCACAATACTGGGGAA 59.763 50.000 0.00 0.00 0.00 3.97
4251 13767 1.833630 CAGCTCTCACAATACTGGGGA 59.166 52.381 0.00 0.00 0.00 4.81
4252 13768 1.134280 CCAGCTCTCACAATACTGGGG 60.134 57.143 0.00 0.00 43.42 4.96
4253 13769 1.745141 GCCAGCTCTCACAATACTGGG 60.745 57.143 9.24 0.00 46.50 4.45
4255 13771 1.209019 AGGCCAGCTCTCACAATACTG 59.791 52.381 5.01 0.00 0.00 2.74
4256 13772 1.484240 GAGGCCAGCTCTCACAATACT 59.516 52.381 5.01 0.00 0.00 2.12
4257 13773 1.474143 GGAGGCCAGCTCTCACAATAC 60.474 57.143 5.01 0.00 33.18 1.89
4258 13774 0.833287 GGAGGCCAGCTCTCACAATA 59.167 55.000 5.01 0.00 33.18 1.90
4259 13775 0.913451 AGGAGGCCAGCTCTCACAAT 60.913 55.000 5.01 0.00 33.18 2.71
4260 13776 0.252239 TAGGAGGCCAGCTCTCACAA 60.252 55.000 5.01 0.00 33.18 3.33
4261 13777 0.252239 TTAGGAGGCCAGCTCTCACA 60.252 55.000 5.01 0.00 33.18 3.58
4262 13778 0.176910 GTTAGGAGGCCAGCTCTCAC 59.823 60.000 5.01 0.00 33.18 3.51
4263 13779 0.252239 TGTTAGGAGGCCAGCTCTCA 60.252 55.000 5.01 0.00 33.18 3.27
4264 13780 0.905357 TTGTTAGGAGGCCAGCTCTC 59.095 55.000 5.01 0.00 0.00 3.20
4265 13781 0.615850 GTTGTTAGGAGGCCAGCTCT 59.384 55.000 5.01 0.00 0.00 4.09
4266 13782 0.324943 TGTTGTTAGGAGGCCAGCTC 59.675 55.000 5.01 0.00 0.00 4.09
4267 13783 0.326264 CTGTTGTTAGGAGGCCAGCT 59.674 55.000 5.01 0.00 0.00 4.24
4268 13784 1.308783 GCTGTTGTTAGGAGGCCAGC 61.309 60.000 5.01 0.00 38.58 4.85
4269 13785 0.036732 TGCTGTTGTTAGGAGGCCAG 59.963 55.000 5.01 0.00 0.00 4.85
4270 13786 0.476338 TTGCTGTTGTTAGGAGGCCA 59.524 50.000 5.01 0.00 0.00 5.36
4271 13787 0.881796 GTTGCTGTTGTTAGGAGGCC 59.118 55.000 0.00 0.00 0.00 5.19
4272 13788 1.897560 AGTTGCTGTTGTTAGGAGGC 58.102 50.000 0.00 0.00 0.00 4.70
4273 13789 2.030805 GCAAGTTGCTGTTGTTAGGAGG 60.031 50.000 20.71 0.00 40.96 4.30
4274 13790 3.273919 GCAAGTTGCTGTTGTTAGGAG 57.726 47.619 20.71 0.00 40.96 3.69
4286 13802 1.135286 GCCCTATGTTCAGCAAGTTGC 60.135 52.381 20.44 20.44 45.46 4.17
4287 13803 2.161855 TGCCCTATGTTCAGCAAGTTG 58.838 47.619 0.00 0.00 30.97 3.16
4288 13804 2.584835 TGCCCTATGTTCAGCAAGTT 57.415 45.000 0.00 0.00 30.97 2.66
4289 13805 2.814805 ATGCCCTATGTTCAGCAAGT 57.185 45.000 0.00 0.00 38.99 3.16
4290 13806 4.454678 TCTTATGCCCTATGTTCAGCAAG 58.545 43.478 0.00 0.00 38.99 4.01
4291 13807 4.502105 TCTTATGCCCTATGTTCAGCAA 57.498 40.909 0.00 0.00 38.99 3.91
4292 13808 4.712051 ATCTTATGCCCTATGTTCAGCA 57.288 40.909 0.00 0.00 40.00 4.41
4293 13809 7.175641 ACAATAATCTTATGCCCTATGTTCAGC 59.824 37.037 0.00 0.00 0.00 4.26
4294 13810 8.509690 CACAATAATCTTATGCCCTATGTTCAG 58.490 37.037 0.00 0.00 0.00 3.02
4295 13811 8.217111 TCACAATAATCTTATGCCCTATGTTCA 58.783 33.333 0.00 0.00 0.00 3.18
4296 13812 8.621532 TCACAATAATCTTATGCCCTATGTTC 57.378 34.615 0.00 0.00 0.00 3.18
4297 13813 8.995027 TTCACAATAATCTTATGCCCTATGTT 57.005 30.769 0.00 0.00 0.00 2.71
4298 13814 9.236006 GATTCACAATAATCTTATGCCCTATGT 57.764 33.333 0.00 0.00 33.82 2.29
4299 13815 8.680903 GGATTCACAATAATCTTATGCCCTATG 58.319 37.037 0.00 0.00 36.34 2.23
4300 13816 8.618385 AGGATTCACAATAATCTTATGCCCTAT 58.382 33.333 0.00 0.00 36.34 2.57
4301 13817 7.884877 CAGGATTCACAATAATCTTATGCCCTA 59.115 37.037 0.00 0.00 36.34 3.53
4302 13818 6.718454 CAGGATTCACAATAATCTTATGCCCT 59.282 38.462 0.00 0.00 36.34 5.19
4303 13819 6.571150 GCAGGATTCACAATAATCTTATGCCC 60.571 42.308 0.00 0.00 35.79 5.36
4304 13820 6.016024 TGCAGGATTCACAATAATCTTATGCC 60.016 38.462 13.82 0.00 38.08 4.40
4305 13821 6.973843 TGCAGGATTCACAATAATCTTATGC 58.026 36.000 0.00 0.00 38.62 3.14
4306 13822 8.027189 CCATGCAGGATTCACAATAATCTTATG 58.973 37.037 0.00 0.00 41.22 1.90
4307 13823 7.946219 TCCATGCAGGATTCACAATAATCTTAT 59.054 33.333 0.00 0.00 43.07 1.73
4308 13824 7.289310 TCCATGCAGGATTCACAATAATCTTA 58.711 34.615 0.00 0.00 43.07 2.10
4309 13825 6.131264 TCCATGCAGGATTCACAATAATCTT 58.869 36.000 0.00 0.00 43.07 2.40
4310 13826 5.698104 TCCATGCAGGATTCACAATAATCT 58.302 37.500 0.00 0.00 43.07 2.40
4324 13840 2.810274 CCTTGACGAATATCCATGCAGG 59.190 50.000 0.00 0.00 39.47 4.85
4325 13841 3.470709 ACCTTGACGAATATCCATGCAG 58.529 45.455 0.00 0.00 0.00 4.41
4326 13842 3.558931 ACCTTGACGAATATCCATGCA 57.441 42.857 0.00 0.00 0.00 3.96
4327 13843 4.631813 GGATACCTTGACGAATATCCATGC 59.368 45.833 4.59 0.00 41.84 4.06
4328 13844 5.793817 TGGATACCTTGACGAATATCCATG 58.206 41.667 7.57 0.00 45.22 3.66
4330 13846 4.039973 GGTGGATACCTTGACGAATATCCA 59.960 45.833 7.57 7.57 46.97 3.41
4331 13847 4.562963 GGGTGGATACCTTGACGAATATCC 60.563 50.000 0.00 2.74 46.66 2.59
4332 13848 4.566987 GGGTGGATACCTTGACGAATATC 58.433 47.826 0.00 0.00 46.66 1.63
4333 13849 3.006537 CGGGTGGATACCTTGACGAATAT 59.993 47.826 0.00 0.00 46.66 1.28
4334 13850 2.363038 CGGGTGGATACCTTGACGAATA 59.637 50.000 0.00 0.00 46.66 1.75
4335 13851 1.138266 CGGGTGGATACCTTGACGAAT 59.862 52.381 0.00 0.00 46.66 3.34
4336 13852 0.533491 CGGGTGGATACCTTGACGAA 59.467 55.000 0.00 0.00 46.66 3.85
4337 13853 1.324740 CCGGGTGGATACCTTGACGA 61.325 60.000 0.00 0.00 46.66 4.20
4338 13854 1.143183 CCGGGTGGATACCTTGACG 59.857 63.158 0.00 0.00 46.66 4.35
4339 13855 2.599216 TCCGGGTGGATACCTTGAC 58.401 57.895 0.00 0.00 46.66 3.18
4350 13866 3.727258 TTGGGGCTCATCCGGGTG 61.727 66.667 8.97 8.97 34.94 4.61
4351 13867 3.728373 GTTGGGGCTCATCCGGGT 61.728 66.667 0.00 0.00 34.94 5.28
4352 13868 3.704231 CTGTTGGGGCTCATCCGGG 62.704 68.421 0.00 0.00 34.94 5.73
4353 13869 2.124570 CTGTTGGGGCTCATCCGG 60.125 66.667 0.00 0.00 34.94 5.14
4354 13870 2.124570 CCTGTTGGGGCTCATCCG 60.125 66.667 0.00 0.00 34.94 4.18
4355 13871 1.077429 GTCCTGTTGGGGCTCATCC 60.077 63.158 0.00 0.00 36.61 3.51
4356 13872 4.645809 GTCCTGTTGGGGCTCATC 57.354 61.111 0.00 0.00 36.61 2.92
4361 13877 0.910088 AGTCCTAGTCCTGTTGGGGC 60.910 60.000 0.00 0.00 40.74 5.80
4362 13878 2.544844 TAGTCCTAGTCCTGTTGGGG 57.455 55.000 0.00 0.00 35.33 4.96
4363 13879 3.838903 ACTTTAGTCCTAGTCCTGTTGGG 59.161 47.826 0.00 0.00 0.00 4.12
4364 13880 5.715753 AGTACTTTAGTCCTAGTCCTGTTGG 59.284 44.000 0.00 0.00 0.00 3.77
4365 13881 6.127675 GGAGTACTTTAGTCCTAGTCCTGTTG 60.128 46.154 0.00 0.00 43.55 3.33
4366 13882 5.951148 GGAGTACTTTAGTCCTAGTCCTGTT 59.049 44.000 0.00 0.00 43.55 3.16
4367 13883 5.508567 GGAGTACTTTAGTCCTAGTCCTGT 58.491 45.833 0.00 0.00 43.55 4.00
4368 13884 4.888823 GGGAGTACTTTAGTCCTAGTCCTG 59.111 50.000 0.00 0.00 45.69 3.86
4369 13885 4.795165 AGGGAGTACTTTAGTCCTAGTCCT 59.205 45.833 0.00 0.00 45.69 3.85
4370 13886 5.128033 AGGGAGTACTTTAGTCCTAGTCC 57.872 47.826 0.00 0.00 45.69 3.85
4371 13887 5.132502 GGAGGGAGTACTTTAGTCCTAGTC 58.867 50.000 0.00 2.94 45.69 2.59
4372 13888 4.385088 CGGAGGGAGTACTTTAGTCCTAGT 60.385 50.000 0.00 0.00 45.69 2.57
4373 13889 4.136051 CGGAGGGAGTACTTTAGTCCTAG 58.864 52.174 0.00 0.00 45.69 3.02
4374 13890 3.525199 ACGGAGGGAGTACTTTAGTCCTA 59.475 47.826 0.00 0.00 45.69 2.94
4375 13891 2.311243 ACGGAGGGAGTACTTTAGTCCT 59.689 50.000 0.00 0.00 45.69 3.85
4376 13892 2.687425 GACGGAGGGAGTACTTTAGTCC 59.313 54.545 0.00 0.73 45.68 3.85
4377 13893 2.687425 GGACGGAGGGAGTACTTTAGTC 59.313 54.545 0.00 2.00 0.00 2.59
4378 13894 2.732763 GGACGGAGGGAGTACTTTAGT 58.267 52.381 0.00 0.00 0.00 2.24
4379 13895 1.674962 CGGACGGAGGGAGTACTTTAG 59.325 57.143 0.00 0.00 0.00 1.85
4380 13896 1.683011 CCGGACGGAGGGAGTACTTTA 60.683 57.143 4.40 0.00 37.50 1.85
4381 13897 0.969409 CCGGACGGAGGGAGTACTTT 60.969 60.000 4.40 0.00 37.50 2.66
4382 13898 1.379576 CCGGACGGAGGGAGTACTT 60.380 63.158 4.40 0.00 37.50 2.24
4383 13899 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
4384 13900 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
4385 13901 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4386 13902 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
4387 13903 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4388 13904 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4389 13905 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4390 13906 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4391 13907 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
4392 13908 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
4393 13909 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
4394 13910 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
4395 13911 2.660189 TCCGACAAGTATTTCCGGAC 57.340 50.000 1.83 0.00 43.47 4.79
4396 13912 3.681593 TTTCCGACAAGTATTTCCGGA 57.318 42.857 0.00 0.00 46.18 5.14
4397 13913 4.752661 TTTTTCCGACAAGTATTTCCGG 57.247 40.909 0.00 0.00 41.36 5.14
4398 13914 5.092781 CCATTTTTCCGACAAGTATTTCCG 58.907 41.667 0.00 0.00 0.00 4.30
4399 13915 6.262193 TCCATTTTTCCGACAAGTATTTCC 57.738 37.500 0.00 0.00 0.00 3.13
4400 13916 7.312899 ACATCCATTTTTCCGACAAGTATTTC 58.687 34.615 0.00 0.00 0.00 2.17
4401 13917 7.227049 ACATCCATTTTTCCGACAAGTATTT 57.773 32.000 0.00 0.00 0.00 1.40
4402 13918 6.834168 ACATCCATTTTTCCGACAAGTATT 57.166 33.333 0.00 0.00 0.00 1.89
4403 13919 7.993183 AGATACATCCATTTTTCCGACAAGTAT 59.007 33.333 0.00 0.00 0.00 2.12
4404 13920 7.335627 AGATACATCCATTTTTCCGACAAGTA 58.664 34.615 0.00 0.00 0.00 2.24
4405 13921 6.180472 AGATACATCCATTTTTCCGACAAGT 58.820 36.000 0.00 0.00 0.00 3.16
4406 13922 6.683974 AGATACATCCATTTTTCCGACAAG 57.316 37.500 0.00 0.00 0.00 3.16
4407 13923 7.561251 TCTAGATACATCCATTTTTCCGACAA 58.439 34.615 0.00 0.00 0.00 3.18
4408 13924 7.119709 TCTAGATACATCCATTTTTCCGACA 57.880 36.000 0.00 0.00 0.00 4.35
4409 13925 7.657761 ACATCTAGATACATCCATTTTTCCGAC 59.342 37.037 4.54 0.00 0.00 4.79
4410 13926 7.735917 ACATCTAGATACATCCATTTTTCCGA 58.264 34.615 4.54 0.00 0.00 4.55
4411 13927 7.969536 ACATCTAGATACATCCATTTTTCCG 57.030 36.000 4.54 0.00 0.00 4.30
4447 13963 8.160106 GGAGAGTGGATAAAATTGGATGTATCT 58.840 37.037 0.00 0.00 0.00 1.98
4448 13964 7.118390 CGGAGAGTGGATAAAATTGGATGTATC 59.882 40.741 0.00 0.00 0.00 2.24
4449 13965 6.936900 CGGAGAGTGGATAAAATTGGATGTAT 59.063 38.462 0.00 0.00 0.00 2.29
4450 13966 6.099125 TCGGAGAGTGGATAAAATTGGATGTA 59.901 38.462 0.00 0.00 0.00 2.29
4451 13967 5.104527 TCGGAGAGTGGATAAAATTGGATGT 60.105 40.000 0.00 0.00 0.00 3.06
4452 13968 5.237344 GTCGGAGAGTGGATAAAATTGGATG 59.763 44.000 0.00 0.00 36.95 3.51
4453 13969 5.368989 GTCGGAGAGTGGATAAAATTGGAT 58.631 41.667 0.00 0.00 36.95 3.41
4454 13970 4.679639 CGTCGGAGAGTGGATAAAATTGGA 60.680 45.833 0.00 0.00 36.95 3.53
4455 13971 3.555956 CGTCGGAGAGTGGATAAAATTGG 59.444 47.826 0.00 0.00 36.95 3.16
4456 13972 4.430007 TCGTCGGAGAGTGGATAAAATTG 58.570 43.478 0.00 0.00 36.95 2.32
4457 13973 4.683832 CTCGTCGGAGAGTGGATAAAATT 58.316 43.478 0.00 0.00 43.27 1.82
4458 13974 4.308899 CTCGTCGGAGAGTGGATAAAAT 57.691 45.455 0.00 0.00 43.27 1.82
4459 13975 3.777465 CTCGTCGGAGAGTGGATAAAA 57.223 47.619 0.00 0.00 43.27 1.52
4473 13989 0.590732 CCGTCCCGAAATACTCGTCG 60.591 60.000 0.00 0.00 46.65 5.12
4474 13990 0.734889 TCCGTCCCGAAATACTCGTC 59.265 55.000 0.00 0.00 46.65 4.20
4475 13991 0.737219 CTCCGTCCCGAAATACTCGT 59.263 55.000 0.00 0.00 46.65 4.18
4477 13993 0.388294 CCCTCCGTCCCGAAATACTC 59.612 60.000 0.00 0.00 0.00 2.59
4478 13994 0.032813 TCCCTCCGTCCCGAAATACT 60.033 55.000 0.00 0.00 0.00 2.12
4479 13995 0.388294 CTCCCTCCGTCCCGAAATAC 59.612 60.000 0.00 0.00 0.00 1.89
4480 13996 0.032813 ACTCCCTCCGTCCCGAAATA 60.033 55.000 0.00 0.00 0.00 1.40
4481 13997 0.032813 TACTCCCTCCGTCCCGAAAT 60.033 55.000 0.00 0.00 0.00 2.17
4482 13998 0.967380 GTACTCCCTCCGTCCCGAAA 60.967 60.000 0.00 0.00 0.00 3.46
4483 13999 1.379044 GTACTCCCTCCGTCCCGAA 60.379 63.158 0.00 0.00 0.00 4.30
4484 14000 2.273449 GTACTCCCTCCGTCCCGA 59.727 66.667 0.00 0.00 0.00 5.14
4485 14001 1.987807 TAGGTACTCCCTCCGTCCCG 61.988 65.000 0.00 0.00 44.81 5.14
4486 14002 0.259938 TTAGGTACTCCCTCCGTCCC 59.740 60.000 0.00 0.00 44.81 4.46
4487 14003 1.064091 ACTTAGGTACTCCCTCCGTCC 60.064 57.143 0.00 0.00 44.81 4.79
4488 14004 2.433662 ACTTAGGTACTCCCTCCGTC 57.566 55.000 0.00 0.00 44.81 4.79
4489 14005 3.118531 TCTACTTAGGTACTCCCTCCGT 58.881 50.000 0.00 0.00 44.81 4.69
4490 14006 3.853355 TCTACTTAGGTACTCCCTCCG 57.147 52.381 0.00 0.00 44.81 4.63
4491 14007 5.703310 TCATTCTACTTAGGTACTCCCTCC 58.297 45.833 0.00 0.00 44.81 4.30
4492 14008 7.235804 AGATCATTCTACTTAGGTACTCCCTC 58.764 42.308 0.00 0.00 44.81 4.30
4493 14009 7.074494 AGAGATCATTCTACTTAGGTACTCCCT 59.926 40.741 0.00 0.00 38.82 4.20
4494 14010 7.175990 CAGAGATCATTCTACTTAGGTACTCCC 59.824 44.444 0.00 0.00 33.44 4.30
4495 14011 7.308951 GCAGAGATCATTCTACTTAGGTACTCC 60.309 44.444 0.00 0.00 33.44 3.85
4496 14012 7.447238 AGCAGAGATCATTCTACTTAGGTACTC 59.553 40.741 0.00 0.00 33.44 2.59
4497 14013 7.294584 AGCAGAGATCATTCTACTTAGGTACT 58.705 38.462 0.00 0.00 35.42 2.73
4498 14014 7.229707 TGAGCAGAGATCATTCTACTTAGGTAC 59.770 40.741 0.00 0.00 30.30 3.34
4499 14015 7.290813 TGAGCAGAGATCATTCTACTTAGGTA 58.709 38.462 0.00 0.00 30.30 3.08
4500 14016 6.132658 TGAGCAGAGATCATTCTACTTAGGT 58.867 40.000 0.00 0.00 30.30 3.08
4501 14017 6.294675 CCTGAGCAGAGATCATTCTACTTAGG 60.295 46.154 8.02 8.02 32.11 2.69
4502 14018 6.489700 TCCTGAGCAGAGATCATTCTACTTAG 59.510 42.308 0.00 0.00 30.30 2.18
4503 14019 6.368805 TCCTGAGCAGAGATCATTCTACTTA 58.631 40.000 0.00 0.00 30.30 2.24
4504 14020 5.207354 TCCTGAGCAGAGATCATTCTACTT 58.793 41.667 0.00 0.00 30.30 2.24
4505 14021 4.802307 TCCTGAGCAGAGATCATTCTACT 58.198 43.478 0.00 0.00 30.30 2.57
4506 14022 5.477984 AGATCCTGAGCAGAGATCATTCTAC 59.522 44.000 20.73 0.00 37.48 2.59
4507 14023 5.477637 CAGATCCTGAGCAGAGATCATTCTA 59.522 44.000 20.73 0.00 37.48 2.10
4508 14024 4.282449 CAGATCCTGAGCAGAGATCATTCT 59.718 45.833 20.73 7.38 37.48 2.40
4509 14025 4.039488 ACAGATCCTGAGCAGAGATCATTC 59.961 45.833 20.73 5.90 37.48 2.67
4510 14026 3.968649 ACAGATCCTGAGCAGAGATCATT 59.031 43.478 20.73 10.92 37.48 2.57
4511 14027 3.578978 ACAGATCCTGAGCAGAGATCAT 58.421 45.455 20.73 11.88 37.48 2.45
4512 14028 3.029483 ACAGATCCTGAGCAGAGATCA 57.971 47.619 20.73 0.00 37.48 2.92
4513 14029 3.058293 CGTACAGATCCTGAGCAGAGATC 60.058 52.174 15.30 15.30 36.37 2.75
4514 14030 2.884012 CGTACAGATCCTGAGCAGAGAT 59.116 50.000 0.00 0.60 35.18 2.75
4515 14031 2.293170 CGTACAGATCCTGAGCAGAGA 58.707 52.381 0.00 0.00 35.18 3.10
4516 14032 1.336440 CCGTACAGATCCTGAGCAGAG 59.664 57.143 0.00 0.00 35.18 3.35
4517 14033 1.341089 ACCGTACAGATCCTGAGCAGA 60.341 52.381 0.00 0.00 35.18 4.26
4518 14034 1.107114 ACCGTACAGATCCTGAGCAG 58.893 55.000 0.45 0.00 35.18 4.24
4519 14035 2.092592 TCTACCGTACAGATCCTGAGCA 60.093 50.000 0.45 0.00 35.18 4.26
4520 14036 2.573369 TCTACCGTACAGATCCTGAGC 58.427 52.381 0.45 0.00 35.18 4.26
4521 14037 6.092944 GTGATATCTACCGTACAGATCCTGAG 59.907 46.154 3.98 0.00 34.58 3.35
4522 14038 5.938710 GTGATATCTACCGTACAGATCCTGA 59.061 44.000 3.98 0.00 34.58 3.86
4523 14039 5.163844 CGTGATATCTACCGTACAGATCCTG 60.164 48.000 3.98 0.00 34.58 3.86
4524 14040 4.936411 CGTGATATCTACCGTACAGATCCT 59.064 45.833 3.98 0.00 34.58 3.24
4525 14041 4.094590 CCGTGATATCTACCGTACAGATCC 59.905 50.000 3.98 0.00 34.58 3.36
4526 14042 4.437121 GCCGTGATATCTACCGTACAGATC 60.437 50.000 3.98 0.00 34.58 2.75
4527 14043 3.439476 GCCGTGATATCTACCGTACAGAT 59.561 47.826 3.98 0.00 36.68 2.90
4528 14044 2.810274 GCCGTGATATCTACCGTACAGA 59.190 50.000 3.98 0.00 0.00 3.41
4529 14045 2.551032 TGCCGTGATATCTACCGTACAG 59.449 50.000 3.98 0.00 0.00 2.74
4530 14046 2.574450 TGCCGTGATATCTACCGTACA 58.426 47.619 3.98 2.52 0.00 2.90
4531 14047 3.631145 TTGCCGTGATATCTACCGTAC 57.369 47.619 3.98 0.00 0.00 3.67
4532 14048 4.859304 ATTTGCCGTGATATCTACCGTA 57.141 40.909 3.98 0.00 0.00 4.02
4533 14049 3.746045 ATTTGCCGTGATATCTACCGT 57.254 42.857 3.98 0.00 0.00 4.83
4534 14050 4.804139 GGATATTTGCCGTGATATCTACCG 59.196 45.833 3.98 3.93 36.15 4.02
4535 14051 5.978814 AGGATATTTGCCGTGATATCTACC 58.021 41.667 3.98 0.00 36.15 3.18
4536 14052 6.631016 TGAGGATATTTGCCGTGATATCTAC 58.369 40.000 3.98 0.18 36.15 2.59
4537 14053 6.850752 TGAGGATATTTGCCGTGATATCTA 57.149 37.500 3.98 0.00 36.15 1.98
4538 14054 5.745312 TGAGGATATTTGCCGTGATATCT 57.255 39.130 3.98 0.00 36.15 1.98
4539 14055 5.163953 CGTTGAGGATATTTGCCGTGATATC 60.164 44.000 0.00 0.00 35.48 1.63
4540 14056 4.690748 CGTTGAGGATATTTGCCGTGATAT 59.309 41.667 0.00 0.00 0.00 1.63
4541 14057 4.055360 CGTTGAGGATATTTGCCGTGATA 58.945 43.478 0.00 0.00 0.00 2.15
4542 14058 2.872245 CGTTGAGGATATTTGCCGTGAT 59.128 45.455 0.00 0.00 0.00 3.06
4543 14059 2.093921 TCGTTGAGGATATTTGCCGTGA 60.094 45.455 0.00 0.00 0.00 4.35
4544 14060 2.030457 GTCGTTGAGGATATTTGCCGTG 59.970 50.000 0.00 0.00 0.00 4.94
4545 14061 2.277084 GTCGTTGAGGATATTTGCCGT 58.723 47.619 0.00 0.00 0.00 5.68
4546 14062 2.276201 TGTCGTTGAGGATATTTGCCG 58.724 47.619 0.00 0.00 0.00 5.69
4547 14063 3.487544 GCTTGTCGTTGAGGATATTTGCC 60.488 47.826 0.00 0.00 0.00 4.52
4548 14064 3.375299 AGCTTGTCGTTGAGGATATTTGC 59.625 43.478 0.00 0.00 0.00 3.68
4549 14065 4.728882 GCAGCTTGTCGTTGAGGATATTTG 60.729 45.833 0.00 0.00 0.00 2.32
4550 14066 3.375299 GCAGCTTGTCGTTGAGGATATTT 59.625 43.478 0.00 0.00 0.00 1.40
4551 14067 2.939103 GCAGCTTGTCGTTGAGGATATT 59.061 45.455 0.00 0.00 0.00 1.28
4552 14068 2.093500 TGCAGCTTGTCGTTGAGGATAT 60.093 45.455 0.00 0.00 0.00 1.63
4553 14069 1.275010 TGCAGCTTGTCGTTGAGGATA 59.725 47.619 0.00 0.00 0.00 2.59
4554 14070 0.035317 TGCAGCTTGTCGTTGAGGAT 59.965 50.000 0.00 0.00 0.00 3.24
4555 14071 0.179059 TTGCAGCTTGTCGTTGAGGA 60.179 50.000 0.00 0.00 0.00 3.71
4556 14072 0.877071 ATTGCAGCTTGTCGTTGAGG 59.123 50.000 0.00 0.00 0.00 3.86
4557 14073 2.480037 TGTATTGCAGCTTGTCGTTGAG 59.520 45.455 0.00 0.00 0.00 3.02
4558 14074 2.488952 TGTATTGCAGCTTGTCGTTGA 58.511 42.857 0.00 0.00 0.00 3.18
4559 14075 2.967459 TGTATTGCAGCTTGTCGTTG 57.033 45.000 0.00 0.00 0.00 4.10
4560 14076 4.695455 ACTAATGTATTGCAGCTTGTCGTT 59.305 37.500 0.00 0.00 0.00 3.85
4561 14077 4.253685 ACTAATGTATTGCAGCTTGTCGT 58.746 39.130 0.00 0.00 0.00 4.34
4562 14078 4.864916 ACTAATGTATTGCAGCTTGTCG 57.135 40.909 0.00 0.00 0.00 4.35
4563 14079 9.573133 AATTAAACTAATGTATTGCAGCTTGTC 57.427 29.630 0.00 0.00 0.00 3.18
4564 14080 9.927668 AAATTAAACTAATGTATTGCAGCTTGT 57.072 25.926 0.00 0.00 0.00 3.16
4567 14083 9.793252 CTGAAATTAAACTAATGTATTGCAGCT 57.207 29.630 0.00 0.00 28.19 4.24
4568 14084 9.573133 ACTGAAATTAAACTAATGTATTGCAGC 57.427 29.630 0.00 0.00 35.97 5.25
4581 14097 9.213799 GATCTCTGAACTGACTGAAATTAAACT 57.786 33.333 0.00 0.00 0.00 2.66
4582 14098 9.213799 AGATCTCTGAACTGACTGAAATTAAAC 57.786 33.333 0.00 0.00 0.00 2.01
4583 14099 9.429359 GAGATCTCTGAACTGACTGAAATTAAA 57.571 33.333 15.80 0.00 0.00 1.52
4584 14100 8.588472 TGAGATCTCTGAACTGACTGAAATTAA 58.412 33.333 22.95 0.00 0.00 1.40
4585 14101 8.127150 TGAGATCTCTGAACTGACTGAAATTA 57.873 34.615 22.95 0.00 0.00 1.40
4586 14102 7.002250 TGAGATCTCTGAACTGACTGAAATT 57.998 36.000 22.95 0.00 0.00 1.82
4587 14103 6.602410 TGAGATCTCTGAACTGACTGAAAT 57.398 37.500 22.95 0.00 0.00 2.17
4588 14104 6.210185 TCATGAGATCTCTGAACTGACTGAAA 59.790 38.462 22.95 0.00 0.00 2.69
4589 14105 5.713861 TCATGAGATCTCTGAACTGACTGAA 59.286 40.000 22.95 0.00 0.00 3.02
4590 14106 5.259632 TCATGAGATCTCTGAACTGACTGA 58.740 41.667 22.95 9.06 0.00 3.41
4591 14107 5.579564 TCATGAGATCTCTGAACTGACTG 57.420 43.478 22.95 7.20 0.00 3.51
4592 14108 5.479724 TGTTCATGAGATCTCTGAACTGACT 59.520 40.000 35.84 12.58 42.02 3.41
4593 14109 5.718146 TGTTCATGAGATCTCTGAACTGAC 58.282 41.667 35.84 25.31 42.02 3.51
4594 14110 5.990120 TGTTCATGAGATCTCTGAACTGA 57.010 39.130 35.84 26.53 42.02 3.41
4595 14111 6.817140 TCAATGTTCATGAGATCTCTGAACTG 59.183 38.462 35.84 31.10 42.02 3.16
4596 14112 6.944096 TCAATGTTCATGAGATCTCTGAACT 58.056 36.000 35.84 27.67 42.02 3.01
4597 14113 7.606858 TTCAATGTTCATGAGATCTCTGAAC 57.393 36.000 33.48 33.48 41.95 3.18
4598 14114 7.881751 ACTTTCAATGTTCATGAGATCTCTGAA 59.118 33.333 22.95 22.88 0.00 3.02
4599 14115 7.392418 ACTTTCAATGTTCATGAGATCTCTGA 58.608 34.615 22.95 19.12 0.00 3.27
4600 14116 7.612668 ACTTTCAATGTTCATGAGATCTCTG 57.387 36.000 22.95 17.36 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.