Multiple sequence alignment - TraesCS5B01G026800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G026800 chr5B 100.000 4706 0 0 1 4706 25992146 25996851 0.000000e+00 8691
1 TraesCS5B01G026800 chr5B 95.186 3718 143 18 1 3708 26325088 26321397 0.000000e+00 5842
2 TraesCS5B01G026800 chr5B 91.120 2973 230 19 1061 4015 26006119 26009075 0.000000e+00 3997
3 TraesCS5B01G026800 chr5B 83.740 3198 379 87 698 3822 26307339 26304210 0.000000e+00 2894
4 TraesCS5B01G026800 chr5B 84.062 320 13 9 3744 4053 26321407 26321116 1.670000e-69 274
5 TraesCS5B01G026800 chr5D 93.465 3091 157 15 451 3512 34797363 34800437 0.000000e+00 4547
6 TraesCS5B01G026800 chr5D 83.915 3351 408 79 552 3818 34802546 34805849 0.000000e+00 3081
7 TraesCS5B01G026800 chr5D 85.329 2815 329 45 1061 3823 34888272 34891054 0.000000e+00 2833
8 TraesCS5B01G026800 chr5D 84.993 2019 246 39 727 2702 34869299 34871303 0.000000e+00 1997
9 TraesCS5B01G026800 chr5D 88.860 781 87 0 2725 3505 34873094 34873874 0.000000e+00 961
10 TraesCS5B01G026800 chr5D 86.899 832 45 16 3739 4518 34800690 34801509 0.000000e+00 874
11 TraesCS5B01G026800 chr5D 86.257 342 21 16 123 453 34796997 34797323 9.690000e-92 348
12 TraesCS5B01G026800 chr5D 88.837 215 15 4 3468 3682 34875593 34875798 6.040000e-64 255
13 TraesCS5B01G026800 chr5D 95.238 147 7 0 3594 3740 34800459 34800605 2.830000e-57 233
14 TraesCS5B01G026800 chr5D 94.845 97 5 0 29 125 34796872 34796968 8.160000e-33 152
15 TraesCS5B01G026800 chr5A 85.035 2820 335 45 1059 3823 23173869 23176656 0.000000e+00 2789
16 TraesCS5B01G026800 chr5A 84.833 2545 306 44 1070 3576 23615543 23613041 0.000000e+00 2488
17 TraesCS5B01G026800 chr3B 85.180 2699 322 28 1064 3729 638313065 638310412 0.000000e+00 2697
18 TraesCS5B01G026800 chr3A 85.008 2608 322 25 1148 3729 621847712 621845148 0.000000e+00 2586


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G026800 chr5B 25992146 25996851 4705 False 8691.000000 8691 100.000000 1 4706 1 chr5B.!!$F1 4705
1 TraesCS5B01G026800 chr5B 26006119 26009075 2956 False 3997.000000 3997 91.120000 1061 4015 1 chr5B.!!$F2 2954
2 TraesCS5B01G026800 chr5B 26321116 26325088 3972 True 3058.000000 5842 89.624000 1 4053 2 chr5B.!!$R2 4052
3 TraesCS5B01G026800 chr5B 26304210 26307339 3129 True 2894.000000 2894 83.740000 698 3822 1 chr5B.!!$R1 3124
4 TraesCS5B01G026800 chr5D 34888272 34891054 2782 False 2833.000000 2833 85.329000 1061 3823 1 chr5D.!!$F1 2762
5 TraesCS5B01G026800 chr5D 34796872 34805849 8977 False 1539.166667 4547 90.103167 29 4518 6 chr5D.!!$F2 4489
6 TraesCS5B01G026800 chr5D 34869299 34875798 6499 False 1071.000000 1997 87.563333 727 3682 3 chr5D.!!$F3 2955
7 TraesCS5B01G026800 chr5A 23173869 23176656 2787 False 2789.000000 2789 85.035000 1059 3823 1 chr5A.!!$F1 2764
8 TraesCS5B01G026800 chr5A 23613041 23615543 2502 True 2488.000000 2488 84.833000 1070 3576 1 chr5A.!!$R1 2506
9 TraesCS5B01G026800 chr3B 638310412 638313065 2653 True 2697.000000 2697 85.180000 1064 3729 1 chr3B.!!$R1 2665
10 TraesCS5B01G026800 chr3A 621845148 621847712 2564 True 2586.000000 2586 85.008000 1148 3729 1 chr3A.!!$R1 2581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
535 636 0.598065 GGTCGCTGTGCAAAAGGAAT 59.402 50.0 0.0 0.0 0.00 3.01 F
1935 2151 0.458543 CCATCGTGTCCTTCTCGGTG 60.459 60.0 0.0 0.0 41.79 4.94 F
1941 2157 1.118965 TGTCCTTCTCGGTGGCAGAA 61.119 55.0 0.0 0.0 0.00 3.02 F
3182 5188 0.109532 TTCAATGTCGTCCCTTGCCA 59.890 50.0 0.0 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2463 2692 0.107945 CTCCAGTCACCTTAGCCAGC 60.108 60.0 0.00 0.00 0.00 4.85 R
2812 4809 0.323629 CTTGGCCCCAACGAGTAGAA 59.676 55.0 0.00 0.00 0.00 2.10 R
3378 10491 0.527565 CAACAGCTAATGGCACCACC 59.472 55.0 0.00 0.00 44.79 4.61 R
4202 13099 0.040646 TTTCGGCTCTAGGGTCCAGA 59.959 55.0 4.29 0.51 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
409 462 6.093633 GCTTGGATCGTTGACCTTAACTAATT 59.906 38.462 0.00 0.00 0.00 1.40
410 463 7.279313 GCTTGGATCGTTGACCTTAACTAATTA 59.721 37.037 0.00 0.00 0.00 1.40
411 464 8.483307 TTGGATCGTTGACCTTAACTAATTAC 57.517 34.615 0.00 0.00 0.00 1.89
498 593 6.348295 GCATCAGCCATGATTACTGTGATAAG 60.348 42.308 0.00 0.00 43.92 1.73
535 636 0.598065 GGTCGCTGTGCAAAAGGAAT 59.402 50.000 0.00 0.00 0.00 3.01
536 637 1.000274 GGTCGCTGTGCAAAAGGAATT 60.000 47.619 0.00 0.00 0.00 2.17
567 668 4.457834 AAGGGATGTATCTATGTAGCGC 57.542 45.455 0.00 0.00 0.00 5.92
673 793 6.042638 ACTATCTTTTGTGCTCTCTTGCTA 57.957 37.500 0.00 0.00 0.00 3.49
689 809 6.813649 TCTCTTGCTAGTTTGTTGCTATGTAG 59.186 38.462 0.00 0.00 0.00 2.74
690 810 6.464222 TCTTGCTAGTTTGTTGCTATGTAGT 58.536 36.000 0.00 0.00 0.00 2.73
691 811 7.608153 TCTTGCTAGTTTGTTGCTATGTAGTA 58.392 34.615 0.00 0.00 0.00 1.82
692 812 7.759886 TCTTGCTAGTTTGTTGCTATGTAGTAG 59.240 37.037 0.00 0.00 0.00 2.57
693 813 6.931838 TGCTAGTTTGTTGCTATGTAGTAGT 58.068 36.000 0.00 0.00 32.72 2.73
694 814 8.058667 TGCTAGTTTGTTGCTATGTAGTAGTA 57.941 34.615 0.00 0.00 32.72 1.82
695 815 7.972277 TGCTAGTTTGTTGCTATGTAGTAGTAC 59.028 37.037 0.37 0.37 32.72 2.73
696 816 7.165483 GCTAGTTTGTTGCTATGTAGTAGTACG 59.835 40.741 3.32 0.00 32.72 3.67
736 856 9.185192 GCTACCTCAAATATTATTGTTTCATGC 57.815 33.333 0.00 0.00 0.00 4.06
940 1089 7.384115 TCTTTTCATCTTTTTGTAGTCGACGAT 59.616 33.333 10.46 1.11 0.00 3.73
973 1124 4.258543 TCGTTGTGTTGTCCTTTCTTCTT 58.741 39.130 0.00 0.00 0.00 2.52
1011 1181 6.197364 AGTCAGTTTCTAATGGAGTACTCG 57.803 41.667 16.56 2.70 0.00 4.18
1017 1187 8.027771 CAGTTTCTAATGGAGTACTCGTTACTT 58.972 37.037 16.56 7.76 41.48 2.24
1037 1207 4.935808 ACTTATAGCAGTCGGTTTCCTTTG 59.064 41.667 0.00 0.00 0.00 2.77
1038 1208 2.922740 TAGCAGTCGGTTTCCTTTGT 57.077 45.000 0.00 0.00 0.00 2.83
1039 1209 1.308998 AGCAGTCGGTTTCCTTTGTG 58.691 50.000 0.00 0.00 0.00 3.33
1040 1210 1.134220 AGCAGTCGGTTTCCTTTGTGA 60.134 47.619 0.00 0.00 0.00 3.58
1045 1218 5.348164 CAGTCGGTTTCCTTTGTGATTTTT 58.652 37.500 0.00 0.00 0.00 1.94
1055 1228 6.047870 TCCTTTGTGATTTTTCATGTGTTGG 58.952 36.000 0.00 0.00 0.00 3.77
1503 1703 3.131396 CAACTGTGTGGAAGTAGTGACC 58.869 50.000 0.00 0.00 0.00 4.02
1543 1743 1.749638 ACCCTCCTCTACGACGCTG 60.750 63.158 0.00 0.00 0.00 5.18
1626 1826 0.820226 CTGAGGAACGAGCATCCAGA 59.180 55.000 0.00 0.00 39.55 3.86
1725 1937 1.434188 AGGACATGGTGAGGTGTGAA 58.566 50.000 0.00 0.00 0.00 3.18
1752 1964 4.033776 CCTGGAGGCCGCTTTGGA 62.034 66.667 6.40 0.00 42.00 3.53
1812 2027 4.885907 AGCTTGCATCAGTTTGTATATGCT 59.114 37.500 7.56 0.00 43.98 3.79
1869 2084 1.142965 GTTTGCCAACGGTTGCCTT 59.857 52.632 15.31 0.00 0.00 4.35
1935 2151 0.458543 CCATCGTGTCCTTCTCGGTG 60.459 60.000 0.00 0.00 41.79 4.94
1941 2157 1.118965 TGTCCTTCTCGGTGGCAGAA 61.119 55.000 0.00 0.00 0.00 3.02
2124 2346 3.376540 GAAACTGCCAGACTATAGCTCG 58.623 50.000 0.00 0.00 0.00 5.03
2262 2484 6.627395 AGGAAGAAGATAGTCATCACTACG 57.373 41.667 0.00 0.00 37.97 3.51
2358 2580 9.866864 GAAACCATTCTTTCAATCACGGAGACG 62.867 44.444 0.00 0.00 43.46 4.18
2463 2692 5.068855 TGAAGAGATAGCCTTGTCATCTGAG 59.931 44.000 0.00 0.00 0.00 3.35
2595 2824 8.791327 TCATTCAGTCATACTTTCAGCATAAA 57.209 30.769 0.00 0.00 0.00 1.40
2612 2841 6.925165 CAGCATAAAAACATGGACAAAAGACT 59.075 34.615 0.00 0.00 0.00 3.24
2775 4772 3.319245 GGTAAGCACCGAGACGTAC 57.681 57.895 0.00 0.00 34.36 3.67
2810 4807 2.916934 ACCCATGTACAGGTTACCACAT 59.083 45.455 6.79 1.84 29.94 3.21
2821 4821 3.830755 AGGTTACCACATGTTCTACTCGT 59.169 43.478 3.51 0.00 0.00 4.18
3182 5188 0.109532 TTCAATGTCGTCCCTTGCCA 59.890 50.000 0.00 0.00 0.00 4.92
3215 5221 3.696051 GCAAGATGGAATAGCAGAAACCA 59.304 43.478 0.00 0.00 35.09 3.67
3357 10470 3.114606 TCACCTGGAAGCATATCCTGAA 58.885 45.455 0.00 0.00 39.95 3.02
3360 10473 4.999950 CACCTGGAAGCATATCCTGAATAC 59.000 45.833 0.00 0.00 39.95 1.89
3378 10491 5.046591 TGAATACTCCCTTAAGACAGGTGTG 60.047 44.000 3.36 0.00 30.96 3.82
3523 12401 3.060602 GTTGTCAGAAGCTGTAGTCCAC 58.939 50.000 0.00 0.00 32.61 4.02
3524 12402 2.316108 TGTCAGAAGCTGTAGTCCACA 58.684 47.619 0.00 0.00 35.30 4.17
3525 12403 2.035961 TGTCAGAAGCTGTAGTCCACAC 59.964 50.000 0.00 0.00 32.33 3.82
3592 12470 2.783135 TGACATGCTCCAAAGAAGACC 58.217 47.619 0.00 0.00 0.00 3.85
3611 12489 0.532862 CCAGCGGCGGAGTTGAATAT 60.533 55.000 9.78 0.00 0.00 1.28
3716 12594 5.981088 TTGCTGTGGTGATACATTTTCAT 57.019 34.783 0.00 0.00 0.00 2.57
3717 12595 5.981088 TGCTGTGGTGATACATTTTCATT 57.019 34.783 0.00 0.00 0.00 2.57
3737 12622 8.685838 TTCATTGCACCTACCCTTATATAAAC 57.314 34.615 0.00 0.00 0.00 2.01
3869 12760 8.768397 TGAATTATAATGACCTGTTCCTAGTGT 58.232 33.333 0.00 0.00 0.00 3.55
3875 12766 7.923414 AATGACCTGTTCCTAGTGTTTTATC 57.077 36.000 0.00 0.00 0.00 1.75
3969 12866 5.363101 CCTGATCTGCTATTTTGCTCTACA 58.637 41.667 0.00 0.00 0.00 2.74
3973 12870 4.454678 TCTGCTATTTTGCTCTACATGGG 58.545 43.478 0.00 0.00 0.00 4.00
3974 12871 4.164030 TCTGCTATTTTGCTCTACATGGGA 59.836 41.667 0.00 0.00 0.00 4.37
3976 12873 3.817647 GCTATTTTGCTCTACATGGGAGG 59.182 47.826 16.16 3.31 0.00 4.30
3977 12874 4.687219 GCTATTTTGCTCTACATGGGAGGT 60.687 45.833 16.16 0.00 0.00 3.85
3978 12875 2.787473 TTTGCTCTACATGGGAGGTG 57.213 50.000 16.16 4.22 0.00 4.00
3980 12877 1.147153 GCTCTACATGGGAGGTGCC 59.853 63.158 16.16 0.00 0.00 5.01
3981 12878 1.626356 GCTCTACATGGGAGGTGCCA 61.626 60.000 16.16 0.00 38.95 4.92
3982 12879 1.135094 CTCTACATGGGAGGTGCCAT 58.865 55.000 0.00 0.00 38.95 4.40
3983 12880 0.839277 TCTACATGGGAGGTGCCATG 59.161 55.000 24.49 24.49 46.29 3.66
3997 12894 4.101430 AGGTGCCATGTTTCAGTTTTTCAT 59.899 37.500 0.00 0.00 0.00 2.57
4036 12933 1.895020 TAGGCCGTGCTTGGATCGTT 61.895 55.000 0.00 0.00 0.00 3.85
4037 12934 2.480555 GCCGTGCTTGGATCGTTG 59.519 61.111 0.00 0.00 0.00 4.10
4046 12943 2.351738 GCTTGGATCGTTGTTTTGGAGG 60.352 50.000 0.00 0.00 0.00 4.30
4053 12950 5.392703 GGATCGTTGTTTTGGAGGGATTTAC 60.393 44.000 0.00 0.00 0.00 2.01
4054 12951 3.499157 TCGTTGTTTTGGAGGGATTTACG 59.501 43.478 0.00 0.00 0.00 3.18
4055 12952 3.571571 GTTGTTTTGGAGGGATTTACGC 58.428 45.455 0.00 0.00 0.00 4.42
4056 12953 2.164338 TGTTTTGGAGGGATTTACGCC 58.836 47.619 0.00 0.00 0.00 5.68
4057 12954 2.224917 TGTTTTGGAGGGATTTACGCCT 60.225 45.455 0.00 0.00 0.00 5.52
4058 12955 2.122783 TTTGGAGGGATTTACGCCTG 57.877 50.000 0.00 0.00 0.00 4.85
4059 12956 0.988832 TTGGAGGGATTTACGCCTGT 59.011 50.000 0.00 0.00 0.00 4.00
4060 12957 0.251916 TGGAGGGATTTACGCCTGTG 59.748 55.000 0.00 0.00 0.00 3.66
4061 12958 0.539986 GGAGGGATTTACGCCTGTGA 59.460 55.000 0.00 0.00 0.00 3.58
4062 12959 1.065709 GGAGGGATTTACGCCTGTGAA 60.066 52.381 0.00 0.00 0.00 3.18
4063 12960 2.617021 GGAGGGATTTACGCCTGTGAAA 60.617 50.000 0.00 0.00 0.00 2.69
4064 12961 3.279434 GAGGGATTTACGCCTGTGAAAT 58.721 45.455 0.00 0.00 0.00 2.17
4065 12962 4.448210 GAGGGATTTACGCCTGTGAAATA 58.552 43.478 0.00 0.00 0.00 1.40
4066 12963 5.048846 AGGGATTTACGCCTGTGAAATAT 57.951 39.130 0.00 0.00 0.00 1.28
4067 12964 4.821805 AGGGATTTACGCCTGTGAAATATG 59.178 41.667 0.00 0.00 0.00 1.78
4068 12965 4.537015 GGATTTACGCCTGTGAAATATGC 58.463 43.478 0.00 0.00 0.00 3.14
4069 12966 4.036262 GGATTTACGCCTGTGAAATATGCA 59.964 41.667 0.00 0.00 0.00 3.96
4070 12967 5.449862 GGATTTACGCCTGTGAAATATGCAA 60.450 40.000 0.00 0.00 0.00 4.08
4071 12968 2.919666 ACGCCTGTGAAATATGCAAC 57.080 45.000 0.00 0.00 0.00 4.17
4072 12969 2.158559 ACGCCTGTGAAATATGCAACA 58.841 42.857 0.00 0.00 0.00 3.33
4073 12970 2.162208 ACGCCTGTGAAATATGCAACAG 59.838 45.455 6.94 6.94 0.00 3.16
4074 12971 2.162208 CGCCTGTGAAATATGCAACAGT 59.838 45.455 11.85 0.00 0.00 3.55
4075 12972 3.373748 CGCCTGTGAAATATGCAACAGTA 59.626 43.478 11.85 0.00 0.00 2.74
4076 12973 4.142708 CGCCTGTGAAATATGCAACAGTAA 60.143 41.667 11.85 0.00 0.00 2.24
4077 12974 5.618863 CGCCTGTGAAATATGCAACAGTAAA 60.619 40.000 11.85 0.00 0.00 2.01
4078 12975 6.332630 GCCTGTGAAATATGCAACAGTAAAT 58.667 36.000 11.85 0.00 0.00 1.40
4079 12976 7.479980 GCCTGTGAAATATGCAACAGTAAATA 58.520 34.615 11.85 0.00 0.00 1.40
4080 12977 7.973388 GCCTGTGAAATATGCAACAGTAAATAA 59.027 33.333 11.85 0.00 0.00 1.40
4102 12999 6.604735 AATTATCTTGTACATGAACCGAGC 57.395 37.500 14.70 0.00 0.00 5.03
4103 13000 2.380084 TCTTGTACATGAACCGAGCC 57.620 50.000 8.89 0.00 0.00 4.70
4104 13001 1.621317 TCTTGTACATGAACCGAGCCA 59.379 47.619 8.89 0.00 0.00 4.75
4105 13002 2.236146 TCTTGTACATGAACCGAGCCAT 59.764 45.455 8.89 0.00 0.00 4.40
4106 13003 3.449377 TCTTGTACATGAACCGAGCCATA 59.551 43.478 8.89 0.00 0.00 2.74
4107 13004 3.173668 TGTACATGAACCGAGCCATAC 57.826 47.619 0.00 0.00 0.00 2.39
4108 13005 2.124903 GTACATGAACCGAGCCATACG 58.875 52.381 0.00 0.00 0.00 3.06
4120 13017 2.822306 CCATACGGCGCATAATCGT 58.178 52.632 10.83 12.12 40.40 3.73
4121 13018 0.713883 CCATACGGCGCATAATCGTC 59.286 55.000 10.83 0.00 38.19 4.20
4122 13019 1.668919 CCATACGGCGCATAATCGTCT 60.669 52.381 10.83 0.00 38.19 4.18
4123 13020 1.386748 CATACGGCGCATAATCGTCTG 59.613 52.381 10.83 8.41 38.19 3.51
4124 13021 0.937699 TACGGCGCATAATCGTCTGC 60.938 55.000 10.83 0.00 38.19 4.26
4125 13022 2.237066 CGGCGCATAATCGTCTGCA 61.237 57.895 10.83 0.00 38.30 4.41
4126 13023 1.566563 GGCGCATAATCGTCTGCAG 59.433 57.895 10.83 7.63 38.30 4.41
4127 13024 1.154205 GGCGCATAATCGTCTGCAGT 61.154 55.000 14.67 0.00 38.30 4.40
4128 13025 0.042708 GCGCATAATCGTCTGCAGTG 60.043 55.000 14.67 8.01 38.30 3.66
4129 13026 1.280982 CGCATAATCGTCTGCAGTGT 58.719 50.000 14.67 0.00 38.30 3.55
4130 13027 2.459934 CGCATAATCGTCTGCAGTGTA 58.540 47.619 14.67 0.02 38.30 2.90
4131 13028 2.216488 CGCATAATCGTCTGCAGTGTAC 59.784 50.000 14.67 3.58 38.30 2.90
4132 13029 2.216488 GCATAATCGTCTGCAGTGTACG 59.784 50.000 17.66 17.66 38.28 3.67
4133 13030 2.554806 TAATCGTCTGCAGTGTACGG 57.445 50.000 21.80 7.71 37.24 4.02
4134 13031 0.885879 AATCGTCTGCAGTGTACGGA 59.114 50.000 21.80 11.84 37.24 4.69
4135 13032 0.452184 ATCGTCTGCAGTGTACGGAG 59.548 55.000 21.80 4.48 37.24 4.63
4137 13034 0.729478 CGTCTGCAGTGTACGGAGTG 60.729 60.000 14.67 0.00 45.73 3.51
4138 13035 0.596577 GTCTGCAGTGTACGGAGTGA 59.403 55.000 14.67 0.00 45.73 3.41
4139 13036 0.881796 TCTGCAGTGTACGGAGTGAG 59.118 55.000 14.67 0.00 45.73 3.51
4140 13037 0.598562 CTGCAGTGTACGGAGTGAGT 59.401 55.000 5.25 0.00 45.73 3.41
4141 13038 1.810755 CTGCAGTGTACGGAGTGAGTA 59.189 52.381 5.25 0.00 45.73 2.59
4142 13039 1.538512 TGCAGTGTACGGAGTGAGTAC 59.461 52.381 0.00 0.08 45.73 2.73
4143 13040 1.465354 GCAGTGTACGGAGTGAGTACG 60.465 57.143 0.00 0.00 45.73 3.67
4144 13041 2.071540 CAGTGTACGGAGTGAGTACGA 58.928 52.381 0.00 0.00 45.73 3.43
4145 13042 2.676839 CAGTGTACGGAGTGAGTACGAT 59.323 50.000 0.00 0.00 45.73 3.73
4146 13043 3.867493 CAGTGTACGGAGTGAGTACGATA 59.133 47.826 0.00 0.00 45.73 2.92
4147 13044 3.868077 AGTGTACGGAGTGAGTACGATAC 59.132 47.826 0.00 0.00 45.73 2.24
4148 13045 3.618594 GTGTACGGAGTGAGTACGATACA 59.381 47.826 0.00 1.22 45.73 2.29
4149 13046 4.093408 GTGTACGGAGTGAGTACGATACAA 59.907 45.833 0.00 0.00 45.73 2.41
4150 13047 4.330894 TGTACGGAGTGAGTACGATACAAG 59.669 45.833 0.00 0.00 45.73 3.16
4151 13048 2.681848 ACGGAGTGAGTACGATACAAGG 59.318 50.000 0.00 0.00 42.51 3.61
4152 13049 2.033049 CGGAGTGAGTACGATACAAGGG 59.967 54.545 0.00 0.00 0.00 3.95
4153 13050 3.285484 GGAGTGAGTACGATACAAGGGA 58.715 50.000 0.00 0.00 0.00 4.20
4154 13051 3.890147 GGAGTGAGTACGATACAAGGGAT 59.110 47.826 0.00 0.00 0.00 3.85
4155 13052 4.341520 GGAGTGAGTACGATACAAGGGATT 59.658 45.833 0.00 0.00 0.00 3.01
4156 13053 5.263968 AGTGAGTACGATACAAGGGATTG 57.736 43.478 0.00 0.00 0.00 2.67
4157 13054 4.099573 AGTGAGTACGATACAAGGGATTGG 59.900 45.833 0.00 0.00 0.00 3.16
4158 13055 3.181469 TGAGTACGATACAAGGGATTGGC 60.181 47.826 0.00 0.00 0.00 4.52
4159 13056 2.132762 GTACGATACAAGGGATTGGCG 58.867 52.381 0.00 0.00 0.00 5.69
4160 13057 0.539986 ACGATACAAGGGATTGGCGT 59.460 50.000 0.00 0.00 0.00 5.68
4161 13058 0.937304 CGATACAAGGGATTGGCGTG 59.063 55.000 0.00 0.00 0.00 5.34
4162 13059 1.472552 CGATACAAGGGATTGGCGTGA 60.473 52.381 0.00 0.00 0.00 4.35
4163 13060 2.639065 GATACAAGGGATTGGCGTGAA 58.361 47.619 0.00 0.00 0.00 3.18
4164 13061 2.799126 TACAAGGGATTGGCGTGAAT 57.201 45.000 0.00 0.00 0.00 2.57
4165 13062 1.463674 ACAAGGGATTGGCGTGAATC 58.536 50.000 1.17 1.17 0.00 2.52
4166 13063 1.004745 ACAAGGGATTGGCGTGAATCT 59.995 47.619 8.01 0.00 33.52 2.40
4167 13064 2.094675 CAAGGGATTGGCGTGAATCTT 58.905 47.619 8.01 0.00 33.52 2.40
4168 13065 3.278574 CAAGGGATTGGCGTGAATCTTA 58.721 45.455 8.01 0.00 33.52 2.10
4169 13066 3.199880 AGGGATTGGCGTGAATCTTAG 57.800 47.619 8.01 0.00 33.52 2.18
4170 13067 2.771943 AGGGATTGGCGTGAATCTTAGA 59.228 45.455 8.01 0.00 33.52 2.10
4171 13068 3.134458 GGGATTGGCGTGAATCTTAGAG 58.866 50.000 8.01 0.00 33.52 2.43
4172 13069 3.181465 GGGATTGGCGTGAATCTTAGAGA 60.181 47.826 8.01 0.00 33.52 3.10
4173 13070 4.054671 GGATTGGCGTGAATCTTAGAGAG 58.945 47.826 8.01 0.00 33.52 3.20
4174 13071 4.202161 GGATTGGCGTGAATCTTAGAGAGA 60.202 45.833 8.01 0.00 39.13 3.10
4176 13073 4.576216 TGGCGTGAATCTTAGAGAGATC 57.424 45.455 0.00 0.00 44.41 2.75
4177 13074 3.003793 TGGCGTGAATCTTAGAGAGATCG 59.996 47.826 0.00 0.00 44.41 3.69
4178 13075 3.251245 GGCGTGAATCTTAGAGAGATCGA 59.749 47.826 0.00 0.00 44.41 3.59
4179 13076 4.261238 GGCGTGAATCTTAGAGAGATCGAA 60.261 45.833 0.00 0.00 44.41 3.71
4180 13077 4.673311 GCGTGAATCTTAGAGAGATCGAAC 59.327 45.833 0.00 0.00 44.41 3.95
4181 13078 4.901314 CGTGAATCTTAGAGAGATCGAACG 59.099 45.833 0.00 0.00 44.41 3.95
4182 13079 5.209240 GTGAATCTTAGAGAGATCGAACGG 58.791 45.833 0.00 0.00 44.41 4.44
4183 13080 4.882427 TGAATCTTAGAGAGATCGAACGGT 59.118 41.667 0.00 0.00 44.41 4.83
4184 13081 5.007823 TGAATCTTAGAGAGATCGAACGGTC 59.992 44.000 0.00 0.00 44.41 4.79
4185 13082 3.870274 TCTTAGAGAGATCGAACGGTCA 58.130 45.455 10.03 0.00 0.00 4.02
4186 13083 4.259356 TCTTAGAGAGATCGAACGGTCAA 58.741 43.478 10.03 0.00 0.00 3.18
4187 13084 2.923605 AGAGAGATCGAACGGTCAAC 57.076 50.000 10.03 3.91 0.00 3.18
4188 13085 2.160205 AGAGAGATCGAACGGTCAACA 58.840 47.619 10.03 0.00 0.00 3.33
4189 13086 2.755655 AGAGAGATCGAACGGTCAACAT 59.244 45.455 10.03 0.00 0.00 2.71
4190 13087 3.945921 AGAGAGATCGAACGGTCAACATA 59.054 43.478 10.03 0.00 0.00 2.29
4191 13088 4.580995 AGAGAGATCGAACGGTCAACATAT 59.419 41.667 10.03 0.00 0.00 1.78
4192 13089 5.763698 AGAGAGATCGAACGGTCAACATATA 59.236 40.000 10.03 0.00 0.00 0.86
4193 13090 6.262496 AGAGAGATCGAACGGTCAACATATAA 59.738 38.462 10.03 0.00 0.00 0.98
4194 13091 6.439599 AGAGATCGAACGGTCAACATATAAG 58.560 40.000 10.03 0.00 0.00 1.73
4195 13092 5.529791 AGATCGAACGGTCAACATATAAGG 58.470 41.667 10.03 0.00 0.00 2.69
4196 13093 4.987408 TCGAACGGTCAACATATAAGGA 57.013 40.909 0.00 0.00 0.00 3.36
4197 13094 4.675510 TCGAACGGTCAACATATAAGGAC 58.324 43.478 0.00 0.00 0.00 3.85
4198 13095 3.800506 CGAACGGTCAACATATAAGGACC 59.199 47.826 0.00 0.00 44.97 4.46
4205 13102 6.851222 GTCAACATATAAGGACCACATCTG 57.149 41.667 0.00 0.00 0.00 2.90
4206 13103 5.760253 GTCAACATATAAGGACCACATCTGG 59.240 44.000 0.00 0.00 44.26 3.86
4207 13104 5.665360 TCAACATATAAGGACCACATCTGGA 59.335 40.000 0.00 0.00 40.55 3.86
4208 13105 5.552870 ACATATAAGGACCACATCTGGAC 57.447 43.478 0.00 0.00 40.55 4.02
4211 13108 4.153957 GGACCACATCTGGACCCT 57.846 61.111 0.00 0.00 44.33 4.34
4212 13109 3.317280 GGACCACATCTGGACCCTA 57.683 57.895 0.00 0.00 44.33 3.53
4213 13110 1.123928 GGACCACATCTGGACCCTAG 58.876 60.000 0.00 0.00 44.33 3.02
4214 13111 1.343075 GGACCACATCTGGACCCTAGA 60.343 57.143 0.00 0.00 44.33 2.43
4215 13112 2.035632 GACCACATCTGGACCCTAGAG 58.964 57.143 0.00 0.00 40.55 2.43
4216 13113 0.755686 CCACATCTGGACCCTAGAGC 59.244 60.000 0.00 0.00 40.55 4.09
4217 13114 0.755686 CACATCTGGACCCTAGAGCC 59.244 60.000 0.00 0.00 0.00 4.70
4218 13115 0.757188 ACATCTGGACCCTAGAGCCG 60.757 60.000 0.00 0.00 0.00 5.52
4219 13116 0.468214 CATCTGGACCCTAGAGCCGA 60.468 60.000 0.00 0.00 0.00 5.54
4220 13117 0.261991 ATCTGGACCCTAGAGCCGAA 59.738 55.000 0.00 0.00 0.00 4.30
4221 13118 0.040646 TCTGGACCCTAGAGCCGAAA 59.959 55.000 0.00 0.00 0.00 3.46
4222 13119 1.123928 CTGGACCCTAGAGCCGAAAT 58.876 55.000 0.00 0.00 0.00 2.17
4223 13120 0.830648 TGGACCCTAGAGCCGAAATG 59.169 55.000 0.00 0.00 0.00 2.32
4224 13121 1.120530 GGACCCTAGAGCCGAAATGA 58.879 55.000 0.00 0.00 0.00 2.57
4225 13122 1.485066 GGACCCTAGAGCCGAAATGAA 59.515 52.381 0.00 0.00 0.00 2.57
4226 13123 2.104963 GGACCCTAGAGCCGAAATGAAT 59.895 50.000 0.00 0.00 0.00 2.57
4227 13124 3.323979 GGACCCTAGAGCCGAAATGAATA 59.676 47.826 0.00 0.00 0.00 1.75
4228 13125 4.020128 GGACCCTAGAGCCGAAATGAATAT 60.020 45.833 0.00 0.00 0.00 1.28
4229 13126 5.513267 GGACCCTAGAGCCGAAATGAATATT 60.513 44.000 0.00 0.00 0.00 1.28
4230 13127 5.552178 ACCCTAGAGCCGAAATGAATATTC 58.448 41.667 8.60 8.60 0.00 1.75
4231 13128 4.627467 CCCTAGAGCCGAAATGAATATTCG 59.373 45.833 10.80 0.00 46.86 3.34
4246 13143 9.739276 AATGAATATTCGAAGCCTATATTTCCA 57.261 29.630 10.80 0.00 0.00 3.53
4247 13144 9.911788 ATGAATATTCGAAGCCTATATTTCCAT 57.088 29.630 10.80 1.36 0.00 3.41
4248 13145 9.739276 TGAATATTCGAAGCCTATATTTCCATT 57.261 29.630 10.80 0.00 0.00 3.16
4250 13147 9.965902 AATATTCGAAGCCTATATTTCCATTCT 57.034 29.630 3.35 0.00 0.00 2.40
4253 13150 9.965902 ATTCGAAGCCTATATTTCCATTCTAAT 57.034 29.630 3.35 0.00 0.00 1.73
4255 13152 9.871238 TCGAAGCCTATATTTCCATTCTAATAC 57.129 33.333 0.00 0.00 0.00 1.89
4256 13153 9.653287 CGAAGCCTATATTTCCATTCTAATACA 57.347 33.333 0.00 0.00 0.00 2.29
4266 13163 9.911788 ATTTCCATTCTAATACAATCTGTGACT 57.088 29.630 0.00 0.00 0.00 3.41
4267 13164 9.739276 TTTCCATTCTAATACAATCTGTGACTT 57.261 29.630 0.00 0.00 0.00 3.01
4268 13165 9.739276 TTCCATTCTAATACAATCTGTGACTTT 57.261 29.630 0.00 0.00 0.00 2.66
4269 13166 9.166173 TCCATTCTAATACAATCTGTGACTTTG 57.834 33.333 0.00 0.00 0.00 2.77
4270 13167 8.950210 CCATTCTAATACAATCTGTGACTTTGT 58.050 33.333 4.96 4.96 37.37 2.83
4271 13168 9.764870 CATTCTAATACAATCTGTGACTTTGTG 57.235 33.333 8.61 0.00 35.37 3.33
4272 13169 9.725019 ATTCTAATACAATCTGTGACTTTGTGA 57.275 29.630 8.61 0.00 35.37 3.58
4273 13170 8.763049 TCTAATACAATCTGTGACTTTGTGAG 57.237 34.615 8.61 4.98 35.37 3.51
4274 13171 5.869753 ATACAATCTGTGACTTTGTGAGC 57.130 39.130 8.61 0.00 35.37 4.26
4275 13172 3.544684 ACAATCTGTGACTTTGTGAGCA 58.455 40.909 0.00 0.00 32.61 4.26
4276 13173 3.947196 ACAATCTGTGACTTTGTGAGCAA 59.053 39.130 0.00 0.00 32.61 3.91
4277 13174 4.201950 ACAATCTGTGACTTTGTGAGCAAC 60.202 41.667 0.00 0.00 33.82 4.17
4278 13175 1.933181 TCTGTGACTTTGTGAGCAACG 59.067 47.619 0.00 0.00 33.82 4.10
4279 13176 1.933181 CTGTGACTTTGTGAGCAACGA 59.067 47.619 0.00 0.00 33.82 3.85
4280 13177 2.351418 CTGTGACTTTGTGAGCAACGAA 59.649 45.455 0.00 0.00 33.82 3.85
4281 13178 2.942376 TGTGACTTTGTGAGCAACGAAT 59.058 40.909 0.00 0.00 33.82 3.34
4282 13179 3.002246 TGTGACTTTGTGAGCAACGAATC 59.998 43.478 0.00 0.00 33.82 2.52
4283 13180 3.002246 GTGACTTTGTGAGCAACGAATCA 59.998 43.478 0.00 0.00 33.82 2.57
4284 13181 3.002246 TGACTTTGTGAGCAACGAATCAC 59.998 43.478 0.00 0.00 44.88 3.06
4294 13191 1.652124 CAACGAATCACGGTACTTCGG 59.348 52.381 20.95 7.31 44.44 4.30
4295 13192 0.171903 ACGAATCACGGTACTTCGGG 59.828 55.000 20.95 3.65 44.44 5.14
4296 13193 1.143969 CGAATCACGGTACTTCGGGC 61.144 60.000 13.42 0.00 38.41 6.13
4297 13194 1.143969 GAATCACGGTACTTCGGGCG 61.144 60.000 0.00 0.00 32.91 6.13
4298 13195 3.711541 ATCACGGTACTTCGGGCGC 62.712 63.158 0.00 0.00 32.91 6.53
4312 13209 4.465512 GCGCCACCGAACATGCAG 62.466 66.667 0.00 0.00 36.29 4.41
4313 13210 3.803082 CGCCACCGAACATGCAGG 61.803 66.667 0.00 0.00 36.29 4.85
4314 13211 4.120331 GCCACCGAACATGCAGGC 62.120 66.667 0.00 0.00 34.71 4.85
4315 13212 2.360350 CCACCGAACATGCAGGCT 60.360 61.111 0.00 0.00 0.00 4.58
4316 13213 2.693762 CCACCGAACATGCAGGCTG 61.694 63.158 10.94 10.94 0.00 4.85
4317 13214 3.058160 ACCGAACATGCAGGCTGC 61.058 61.111 31.91 31.91 45.29 5.25
4332 13229 2.678471 GCTGCAGCCCAAATATTGTT 57.322 45.000 28.76 0.00 34.31 2.83
4333 13230 2.543641 GCTGCAGCCCAAATATTGTTC 58.456 47.619 28.76 0.00 34.31 3.18
4334 13231 2.801063 CTGCAGCCCAAATATTGTTCG 58.199 47.619 0.00 0.00 0.00 3.95
4335 13232 1.476085 TGCAGCCCAAATATTGTTCGG 59.524 47.619 0.00 0.00 0.00 4.30
4336 13233 1.802508 GCAGCCCAAATATTGTTCGGC 60.803 52.381 7.08 7.08 36.24 5.54
4337 13234 1.750778 CAGCCCAAATATTGTTCGGCT 59.249 47.619 10.52 10.52 43.62 5.52
4338 13235 2.166254 CAGCCCAAATATTGTTCGGCTT 59.834 45.455 12.70 0.88 41.20 4.35
4339 13236 2.427095 AGCCCAAATATTGTTCGGCTTC 59.573 45.455 10.52 0.00 41.20 3.86
4340 13237 2.794631 GCCCAAATATTGTTCGGCTTCG 60.795 50.000 7.68 0.00 34.11 3.79
4341 13238 2.422127 CCCAAATATTGTTCGGCTTCGT 59.578 45.455 0.00 0.00 35.06 3.85
4342 13239 3.119637 CCCAAATATTGTTCGGCTTCGTT 60.120 43.478 0.00 0.00 35.06 3.85
4343 13240 4.095610 CCAAATATTGTTCGGCTTCGTTC 58.904 43.478 0.00 0.00 35.06 3.95
4344 13241 3.651562 AATATTGTTCGGCTTCGTTCG 57.348 42.857 0.00 0.00 35.06 3.95
4345 13242 0.717224 TATTGTTCGGCTTCGTTCGC 59.283 50.000 0.00 0.00 35.06 4.70
4346 13243 0.949105 ATTGTTCGGCTTCGTTCGCT 60.949 50.000 0.00 0.00 35.06 4.93
4347 13244 1.554042 TTGTTCGGCTTCGTTCGCTC 61.554 55.000 0.00 0.00 35.06 5.03
4348 13245 2.803670 TTCGGCTTCGTTCGCTCG 60.804 61.111 0.00 0.00 35.06 5.03
4349 13246 4.771356 TCGGCTTCGTTCGCTCGG 62.771 66.667 0.00 0.00 35.06 4.63
4351 13248 3.479269 GGCTTCGTTCGCTCGGTG 61.479 66.667 0.00 0.00 0.00 4.94
4352 13249 3.479269 GCTTCGTTCGCTCGGTGG 61.479 66.667 0.00 0.00 0.00 4.61
4353 13250 3.479269 CTTCGTTCGCTCGGTGGC 61.479 66.667 0.00 0.00 0.00 5.01
4354 13251 3.916392 CTTCGTTCGCTCGGTGGCT 62.916 63.158 0.00 0.00 0.00 4.75
4355 13252 4.717629 TCGTTCGCTCGGTGGCTG 62.718 66.667 0.00 0.00 0.00 4.85
4362 13259 4.335647 CTCGGTGGCTGGCTGGTT 62.336 66.667 2.00 0.00 0.00 3.67
4363 13260 4.329545 TCGGTGGCTGGCTGGTTC 62.330 66.667 2.00 0.00 0.00 3.62
4365 13262 4.329545 GGTGGCTGGCTGGTTCGA 62.330 66.667 2.00 0.00 0.00 3.71
4366 13263 2.045926 GTGGCTGGCTGGTTCGAT 60.046 61.111 2.00 0.00 0.00 3.59
4367 13264 1.675641 GTGGCTGGCTGGTTCGATT 60.676 57.895 2.00 0.00 0.00 3.34
4368 13265 1.675310 TGGCTGGCTGGTTCGATTG 60.675 57.895 2.00 0.00 0.00 2.67
4369 13266 2.486966 GCTGGCTGGTTCGATTGC 59.513 61.111 0.00 0.00 0.00 3.56
4370 13267 3.056313 GCTGGCTGGTTCGATTGCC 62.056 63.158 10.31 10.31 45.10 4.52
4371 13268 1.377725 CTGGCTGGTTCGATTGCCT 60.378 57.895 15.81 0.00 45.11 4.75
4372 13269 0.962356 CTGGCTGGTTCGATTGCCTT 60.962 55.000 15.81 0.00 45.11 4.35
4373 13270 0.539438 TGGCTGGTTCGATTGCCTTT 60.539 50.000 15.81 0.00 45.11 3.11
4374 13271 0.603065 GGCTGGTTCGATTGCCTTTT 59.397 50.000 10.06 0.00 41.92 2.27
4375 13272 1.000843 GGCTGGTTCGATTGCCTTTTT 59.999 47.619 10.06 0.00 41.92 1.94
4396 13293 7.461182 TTTTTACACCAACCCTATCATTCAG 57.539 36.000 0.00 0.00 0.00 3.02
4397 13294 5.772393 TTACACCAACCCTATCATTCAGT 57.228 39.130 0.00 0.00 0.00 3.41
4398 13295 4.657814 ACACCAACCCTATCATTCAGTT 57.342 40.909 0.00 0.00 0.00 3.16
4399 13296 4.335416 ACACCAACCCTATCATTCAGTTG 58.665 43.478 0.00 0.00 38.00 3.16
4400 13297 3.129287 CACCAACCCTATCATTCAGTTGC 59.871 47.826 0.00 0.00 37.17 4.17
4401 13298 3.245229 ACCAACCCTATCATTCAGTTGCA 60.245 43.478 0.00 0.00 37.17 4.08
4402 13299 3.129287 CCAACCCTATCATTCAGTTGCAC 59.871 47.826 0.00 0.00 37.17 4.57
4403 13300 4.012374 CAACCCTATCATTCAGTTGCACT 58.988 43.478 0.00 0.00 32.30 4.40
4404 13301 5.185454 CAACCCTATCATTCAGTTGCACTA 58.815 41.667 0.00 0.00 32.30 2.74
4405 13302 5.028549 ACCCTATCATTCAGTTGCACTAG 57.971 43.478 0.00 0.00 0.00 2.57
4406 13303 4.471386 ACCCTATCATTCAGTTGCACTAGT 59.529 41.667 0.00 0.00 0.00 2.57
4407 13304 5.053145 CCCTATCATTCAGTTGCACTAGTC 58.947 45.833 0.00 0.00 0.00 2.59
4408 13305 5.053145 CCTATCATTCAGTTGCACTAGTCC 58.947 45.833 0.00 0.00 0.00 3.85
4409 13306 2.959516 TCATTCAGTTGCACTAGTCCG 58.040 47.619 0.00 0.00 0.00 4.79
4410 13307 2.299013 TCATTCAGTTGCACTAGTCCGT 59.701 45.455 0.00 0.00 0.00 4.69
4411 13308 3.508402 TCATTCAGTTGCACTAGTCCGTA 59.492 43.478 0.00 0.00 0.00 4.02
4412 13309 4.021807 TCATTCAGTTGCACTAGTCCGTAA 60.022 41.667 0.00 0.00 0.00 3.18
4413 13310 4.325028 TTCAGTTGCACTAGTCCGTAAA 57.675 40.909 0.00 0.00 0.00 2.01
4414 13311 4.325028 TCAGTTGCACTAGTCCGTAAAA 57.675 40.909 0.00 0.00 0.00 1.52
4415 13312 4.695396 TCAGTTGCACTAGTCCGTAAAAA 58.305 39.130 0.00 0.00 0.00 1.94
4416 13313 4.748102 TCAGTTGCACTAGTCCGTAAAAAG 59.252 41.667 0.00 0.00 0.00 2.27
4417 13314 4.748102 CAGTTGCACTAGTCCGTAAAAAGA 59.252 41.667 0.00 0.00 0.00 2.52
4418 13315 4.748600 AGTTGCACTAGTCCGTAAAAAGAC 59.251 41.667 0.00 0.00 0.00 3.01
4419 13316 3.656559 TGCACTAGTCCGTAAAAAGACC 58.343 45.455 0.00 0.00 33.29 3.85
4420 13317 3.069872 TGCACTAGTCCGTAAAAAGACCA 59.930 43.478 0.00 0.00 33.29 4.02
4421 13318 3.678548 GCACTAGTCCGTAAAAAGACCAG 59.321 47.826 0.00 0.00 33.29 4.00
4422 13319 3.678548 CACTAGTCCGTAAAAAGACCAGC 59.321 47.826 0.00 0.00 33.29 4.85
4423 13320 2.922740 AGTCCGTAAAAAGACCAGCA 57.077 45.000 0.00 0.00 33.29 4.41
4424 13321 3.202829 AGTCCGTAAAAAGACCAGCAA 57.797 42.857 0.00 0.00 33.29 3.91
4425 13322 3.139077 AGTCCGTAAAAAGACCAGCAAG 58.861 45.455 0.00 0.00 33.29 4.01
4426 13323 1.877443 TCCGTAAAAAGACCAGCAAGC 59.123 47.619 0.00 0.00 0.00 4.01
4427 13324 1.880027 CCGTAAAAAGACCAGCAAGCT 59.120 47.619 0.00 0.00 0.00 3.74
4428 13325 3.071479 CCGTAAAAAGACCAGCAAGCTA 58.929 45.455 0.00 0.00 0.00 3.32
4429 13326 3.120304 CCGTAAAAAGACCAGCAAGCTAC 60.120 47.826 0.00 0.00 0.00 3.58
4430 13327 3.746492 CGTAAAAAGACCAGCAAGCTACT 59.254 43.478 0.00 0.00 0.00 2.57
4431 13328 4.143094 CGTAAAAAGACCAGCAAGCTACTC 60.143 45.833 0.00 0.00 0.00 2.59
4432 13329 2.086054 AAAGACCAGCAAGCTACTCG 57.914 50.000 0.00 0.00 0.00 4.18
4433 13330 0.969894 AAGACCAGCAAGCTACTCGT 59.030 50.000 0.00 0.00 0.00 4.18
4434 13331 0.969894 AGACCAGCAAGCTACTCGTT 59.030 50.000 0.00 0.00 0.00 3.85
4435 13332 1.067495 AGACCAGCAAGCTACTCGTTC 60.067 52.381 0.00 0.00 0.00 3.95
4436 13333 0.679505 ACCAGCAAGCTACTCGTTCA 59.320 50.000 0.00 0.00 0.00 3.18
4437 13334 1.337260 ACCAGCAAGCTACTCGTTCAG 60.337 52.381 0.00 0.00 0.00 3.02
4438 13335 1.067565 CCAGCAAGCTACTCGTTCAGA 60.068 52.381 0.00 0.00 0.00 3.27
4439 13336 2.610479 CCAGCAAGCTACTCGTTCAGAA 60.610 50.000 0.00 0.00 0.00 3.02
4440 13337 3.059884 CAGCAAGCTACTCGTTCAGAAA 58.940 45.455 0.00 0.00 0.00 2.52
4441 13338 3.494626 CAGCAAGCTACTCGTTCAGAAAA 59.505 43.478 0.00 0.00 0.00 2.29
4442 13339 4.024893 CAGCAAGCTACTCGTTCAGAAAAA 60.025 41.667 0.00 0.00 0.00 1.94
4460 13357 3.620427 AAAAGGCAAACTTCCGGTTTT 57.380 38.095 0.00 0.00 44.77 2.43
4461 13358 2.882927 AAGGCAAACTTCCGGTTTTC 57.117 45.000 0.00 0.00 44.77 2.29
4462 13359 1.037493 AGGCAAACTTCCGGTTTTCC 58.963 50.000 0.00 0.00 46.58 3.13
4463 13360 0.747852 GGCAAACTTCCGGTTTTCCA 59.252 50.000 0.00 0.00 45.88 3.53
4464 13361 1.343142 GGCAAACTTCCGGTTTTCCAT 59.657 47.619 0.00 0.00 45.88 3.41
4465 13362 2.609491 GGCAAACTTCCGGTTTTCCATC 60.609 50.000 0.00 0.00 45.88 3.51
4466 13363 2.035321 GCAAACTTCCGGTTTTCCATCA 59.965 45.455 0.00 0.00 44.77 3.07
4467 13364 3.491792 GCAAACTTCCGGTTTTCCATCAA 60.492 43.478 0.00 0.00 44.77 2.57
4468 13365 4.799255 GCAAACTTCCGGTTTTCCATCAAT 60.799 41.667 0.00 0.00 44.77 2.57
4469 13366 5.296748 CAAACTTCCGGTTTTCCATCAATT 58.703 37.500 0.00 0.00 44.77 2.32
4470 13367 6.451393 CAAACTTCCGGTTTTCCATCAATTA 58.549 36.000 0.00 0.00 44.77 1.40
4471 13368 6.658188 AACTTCCGGTTTTCCATCAATTAA 57.342 33.333 0.00 0.00 40.70 1.40
4472 13369 6.658188 ACTTCCGGTTTTCCATCAATTAAA 57.342 33.333 0.00 0.00 40.70 1.52
4473 13370 7.056844 ACTTCCGGTTTTCCATCAATTAAAA 57.943 32.000 0.00 0.00 40.70 1.52
4474 13371 7.501844 ACTTCCGGTTTTCCATCAATTAAAAA 58.498 30.769 0.00 0.00 40.70 1.94
4516 13413 8.696410 AAAATGTTCGCAAGTTTTTAGAAAGA 57.304 26.923 0.00 0.00 39.48 2.52
4517 13414 8.871686 AAATGTTCGCAAGTTTTTAGAAAGAT 57.128 26.923 0.00 0.00 39.48 2.40
4518 13415 9.959749 AAATGTTCGCAAGTTTTTAGAAAGATA 57.040 25.926 0.00 0.00 39.48 1.98
4519 13416 9.959749 AATGTTCGCAAGTTTTTAGAAAGATAA 57.040 25.926 0.00 0.00 39.48 1.75
4520 13417 9.612620 ATGTTCGCAAGTTTTTAGAAAGATAAG 57.387 29.630 0.00 0.00 39.48 1.73
4521 13418 8.073768 TGTTCGCAAGTTTTTAGAAAGATAAGG 58.926 33.333 0.00 0.00 39.48 2.69
4522 13419 7.972832 TCGCAAGTTTTTAGAAAGATAAGGA 57.027 32.000 0.00 0.00 39.48 3.36
4523 13420 8.561738 TCGCAAGTTTTTAGAAAGATAAGGAT 57.438 30.769 0.00 0.00 39.48 3.24
4524 13421 9.010029 TCGCAAGTTTTTAGAAAGATAAGGATT 57.990 29.630 0.00 0.00 39.48 3.01
4525 13422 9.626045 CGCAAGTTTTTAGAAAGATAAGGATTT 57.374 29.630 0.00 0.00 0.00 2.17
4557 13454 7.775397 AAAAGTTCATGGACACAAGAAAATG 57.225 32.000 6.96 0.00 36.23 2.32
4558 13455 6.469782 AAGTTCATGGACACAAGAAAATGT 57.530 33.333 6.96 0.00 36.23 2.71
4559 13456 6.469782 AGTTCATGGACACAAGAAAATGTT 57.530 33.333 6.96 0.00 36.23 2.71
4560 13457 6.877236 AGTTCATGGACACAAGAAAATGTTT 58.123 32.000 6.96 0.00 36.23 2.83
4561 13458 6.757947 AGTTCATGGACACAAGAAAATGTTTG 59.242 34.615 6.96 0.00 36.23 2.93
4562 13459 5.049167 TCATGGACACAAGAAAATGTTTGC 58.951 37.500 0.00 0.00 0.00 3.68
4563 13460 3.443037 TGGACACAAGAAAATGTTTGCG 58.557 40.909 0.00 0.00 0.00 4.85
4564 13461 3.129462 TGGACACAAGAAAATGTTTGCGA 59.871 39.130 0.00 0.00 0.00 5.10
4565 13462 4.109050 GGACACAAGAAAATGTTTGCGAA 58.891 39.130 0.00 0.00 0.00 4.70
4566 13463 4.744631 GGACACAAGAAAATGTTTGCGAAT 59.255 37.500 0.00 0.00 0.00 3.34
4567 13464 5.234116 GGACACAAGAAAATGTTTGCGAATT 59.766 36.000 0.00 0.00 0.00 2.17
4568 13465 6.035070 ACACAAGAAAATGTTTGCGAATTG 57.965 33.333 0.00 0.00 0.00 2.32
4569 13466 5.006552 ACACAAGAAAATGTTTGCGAATTGG 59.993 36.000 0.00 0.00 0.00 3.16
4570 13467 5.233902 CACAAGAAAATGTTTGCGAATTGGA 59.766 36.000 0.00 0.00 0.00 3.53
4571 13468 5.814705 ACAAGAAAATGTTTGCGAATTGGAA 59.185 32.000 0.00 0.00 0.00 3.53
4572 13469 6.314896 ACAAGAAAATGTTTGCGAATTGGAAA 59.685 30.769 0.00 0.00 35.32 3.13
4573 13470 6.917217 AGAAAATGTTTGCGAATTGGAAAA 57.083 29.167 0.00 0.00 39.78 2.29
4574 13471 7.313951 AGAAAATGTTTGCGAATTGGAAAAA 57.686 28.000 0.00 0.00 39.78 1.94
4640 13537 4.879104 TGCCAATTTGCAAAAAGTTCAG 57.121 36.364 17.19 1.59 38.56 3.02
4641 13538 3.626670 TGCCAATTTGCAAAAAGTTCAGG 59.373 39.130 17.19 10.91 38.56 3.86
4642 13539 3.876320 GCCAATTTGCAAAAAGTTCAGGA 59.124 39.130 17.19 0.00 0.00 3.86
4643 13540 4.335037 GCCAATTTGCAAAAAGTTCAGGAA 59.665 37.500 17.19 0.00 0.00 3.36
4644 13541 5.008911 GCCAATTTGCAAAAAGTTCAGGAAT 59.991 36.000 17.19 0.00 0.00 3.01
4645 13542 6.459985 GCCAATTTGCAAAAAGTTCAGGAATT 60.460 34.615 17.19 0.00 0.00 2.17
4646 13543 7.482474 CCAATTTGCAAAAAGTTCAGGAATTT 58.518 30.769 17.19 0.00 0.00 1.82
4647 13544 7.432838 CCAATTTGCAAAAAGTTCAGGAATTTG 59.567 33.333 17.19 10.62 34.84 2.32
4648 13545 7.862512 ATTTGCAAAAAGTTCAGGAATTTGA 57.137 28.000 17.19 0.00 33.86 2.69
4649 13546 6.660887 TTGCAAAAAGTTCAGGAATTTGAC 57.339 33.333 0.00 3.91 33.86 3.18
4650 13547 5.728471 TGCAAAAAGTTCAGGAATTTGACA 58.272 33.333 9.56 5.70 33.86 3.58
4651 13548 6.169094 TGCAAAAAGTTCAGGAATTTGACAA 58.831 32.000 9.56 0.00 33.86 3.18
4652 13549 6.091986 TGCAAAAAGTTCAGGAATTTGACAAC 59.908 34.615 9.56 0.00 33.86 3.32
4653 13550 6.313658 GCAAAAAGTTCAGGAATTTGACAACT 59.686 34.615 9.56 0.00 33.86 3.16
4654 13551 7.674705 GCAAAAAGTTCAGGAATTTGACAACTG 60.675 37.037 9.56 0.00 33.86 3.16
4655 13552 6.530019 AAAGTTCAGGAATTTGACAACTGT 57.470 33.333 4.11 0.00 0.00 3.55
4656 13553 6.530019 AAGTTCAGGAATTTGACAACTGTT 57.470 33.333 4.11 0.00 0.00 3.16
4657 13554 6.136541 AGTTCAGGAATTTGACAACTGTTC 57.863 37.500 0.00 2.34 0.00 3.18
4658 13555 5.652014 AGTTCAGGAATTTGACAACTGTTCA 59.348 36.000 0.00 0.00 0.00 3.18
4659 13556 5.499139 TCAGGAATTTGACAACTGTTCAC 57.501 39.130 0.00 0.00 0.00 3.18
4660 13557 4.946772 TCAGGAATTTGACAACTGTTCACA 59.053 37.500 0.00 0.00 0.00 3.58
4661 13558 5.417266 TCAGGAATTTGACAACTGTTCACAA 59.583 36.000 0.00 0.00 0.00 3.33
4662 13559 6.071672 TCAGGAATTTGACAACTGTTCACAAA 60.072 34.615 17.54 17.54 35.49 2.83
4663 13560 6.757947 CAGGAATTTGACAACTGTTCACAAAT 59.242 34.615 19.45 19.45 41.03 2.32
4664 13561 7.278424 CAGGAATTTGACAACTGTTCACAAATT 59.722 33.333 27.57 27.57 46.49 1.82
4665 13562 7.278424 AGGAATTTGACAACTGTTCACAAATTG 59.722 33.333 29.82 9.82 45.02 2.32
4666 13563 6.907206 ATTTGACAACTGTTCACAAATTGG 57.093 33.333 19.45 0.00 37.73 3.16
4667 13564 5.651387 TTGACAACTGTTCACAAATTGGA 57.349 34.783 0.00 0.00 0.00 3.53
4668 13565 5.651387 TGACAACTGTTCACAAATTGGAA 57.349 34.783 0.00 0.00 0.00 3.53
4669 13566 6.030548 TGACAACTGTTCACAAATTGGAAA 57.969 33.333 0.00 0.00 0.00 3.13
4670 13567 6.459066 TGACAACTGTTCACAAATTGGAAAA 58.541 32.000 0.00 0.00 0.00 2.29
4671 13568 6.367422 TGACAACTGTTCACAAATTGGAAAAC 59.633 34.615 0.00 0.00 0.00 2.43
4672 13569 6.226787 ACAACTGTTCACAAATTGGAAAACA 58.773 32.000 0.00 4.24 0.00 2.83
4673 13570 6.368516 ACAACTGTTCACAAATTGGAAAACAG 59.631 34.615 23.30 23.30 45.58 3.16
4677 13574 8.064447 CTGTTCACAAATTGGAAAACAGTATG 57.936 34.615 19.78 5.35 46.00 2.39
4694 13591 6.002062 CAGTATGTGGGTCTGAAAAAGTTC 57.998 41.667 0.00 0.00 0.00 3.01
4695 13592 5.530915 CAGTATGTGGGTCTGAAAAAGTTCA 59.469 40.000 0.00 0.00 41.57 3.18
4696 13593 6.207417 CAGTATGTGGGTCTGAAAAAGTTCAT 59.793 38.462 0.00 0.00 42.85 2.57
4697 13594 4.916983 TGTGGGTCTGAAAAAGTTCATG 57.083 40.909 0.00 0.00 42.85 3.07
4698 13595 4.531854 TGTGGGTCTGAAAAAGTTCATGA 58.468 39.130 0.00 0.00 42.85 3.07
4699 13596 4.952957 TGTGGGTCTGAAAAAGTTCATGAA 59.047 37.500 3.38 3.38 42.85 2.57
4700 13597 5.598005 TGTGGGTCTGAAAAAGTTCATGAAT 59.402 36.000 12.12 0.00 42.85 2.57
4701 13598 6.098124 TGTGGGTCTGAAAAAGTTCATGAATT 59.902 34.615 12.12 4.21 42.85 2.17
4702 13599 7.286546 TGTGGGTCTGAAAAAGTTCATGAATTA 59.713 33.333 12.12 0.00 42.85 1.40
4703 13600 7.809806 GTGGGTCTGAAAAAGTTCATGAATTAG 59.190 37.037 12.12 1.54 42.85 1.73
4704 13601 7.039784 TGGGTCTGAAAAAGTTCATGAATTAGG 60.040 37.037 12.12 0.00 42.85 2.69
4705 13602 7.176690 GGGTCTGAAAAAGTTCATGAATTAGGA 59.823 37.037 12.12 1.47 42.85 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
498 593 4.222114 CGACCATTGAAAACTGAAGCTTC 58.778 43.478 19.89 19.89 0.00 3.86
565 666 1.904852 ATCTGAAGTTGTGCAGCGCG 61.905 55.000 0.00 0.00 32.27 6.86
567 668 2.287188 ACAAATCTGAAGTTGTGCAGCG 60.287 45.455 8.72 0.00 41.78 5.18
576 677 4.993584 CAGAGCTGTGTACAAATCTGAAGT 59.006 41.667 16.88 0.00 39.20 3.01
673 793 6.917533 ACGTACTACTACATAGCAACAAACT 58.082 36.000 0.00 0.00 33.73 2.66
689 809 4.743644 AGCTCTGAAACAACAACGTACTAC 59.256 41.667 0.00 0.00 0.00 2.73
690 810 4.940463 AGCTCTGAAACAACAACGTACTA 58.060 39.130 0.00 0.00 0.00 1.82
691 811 3.793559 AGCTCTGAAACAACAACGTACT 58.206 40.909 0.00 0.00 0.00 2.73
692 812 4.084693 GGTAGCTCTGAAACAACAACGTAC 60.085 45.833 0.00 0.00 0.00 3.67
693 813 4.053295 GGTAGCTCTGAAACAACAACGTA 58.947 43.478 0.00 0.00 0.00 3.57
694 814 2.870411 GGTAGCTCTGAAACAACAACGT 59.130 45.455 0.00 0.00 0.00 3.99
695 815 3.131396 AGGTAGCTCTGAAACAACAACG 58.869 45.455 0.00 0.00 0.00 4.10
696 816 4.127171 TGAGGTAGCTCTGAAACAACAAC 58.873 43.478 21.80 0.00 0.00 3.32
810 938 9.853555 AAAAACGATGATGCAATACAGATAAAA 57.146 25.926 0.00 0.00 0.00 1.52
911 1060 8.944927 GTCGACTACAAAAAGATGAAAAGAAAC 58.055 33.333 8.70 0.00 0.00 2.78
999 1169 7.284944 ACTGCTATAAGTAACGAGTACTCCATT 59.715 37.037 17.23 13.62 42.55 3.16
1011 1181 5.658468 AGGAAACCGACTGCTATAAGTAAC 58.342 41.667 0.00 0.00 0.00 2.50
1017 1187 4.020928 TCACAAAGGAAACCGACTGCTATA 60.021 41.667 0.00 0.00 0.00 1.31
1037 1207 4.569966 TGCAACCAACACATGAAAAATCAC 59.430 37.500 0.00 0.00 0.00 3.06
1038 1208 4.763073 TGCAACCAACACATGAAAAATCA 58.237 34.783 0.00 0.00 0.00 2.57
1039 1209 5.697633 AGATGCAACCAACACATGAAAAATC 59.302 36.000 0.00 0.00 0.00 2.17
1040 1210 5.613329 AGATGCAACCAACACATGAAAAAT 58.387 33.333 0.00 0.00 0.00 1.82
1045 1218 2.815503 CTGAGATGCAACCAACACATGA 59.184 45.455 0.00 0.00 0.00 3.07
1055 1228 1.203523 AGTCGAGGTCTGAGATGCAAC 59.796 52.381 0.00 0.00 0.00 4.17
1275 1466 1.683917 CGGAATTCATCGGAGGAGAGT 59.316 52.381 7.93 0.00 0.00 3.24
1543 1743 1.084370 ATGTAGAAAGCTGCGCCGAC 61.084 55.000 4.18 0.00 0.00 4.79
1602 1802 0.247736 ATGCTCGTTCCTCAGTGGAC 59.752 55.000 0.00 0.00 46.14 4.02
1812 2027 3.254411 TCAATTCCGCATTTGTAACAGCA 59.746 39.130 0.00 0.00 0.00 4.41
1869 2084 1.002430 GCAGGTCTCATCAACCAGTGA 59.998 52.381 0.00 0.00 41.67 3.41
1997 2213 2.714250 TCTTTGGACAACCCATACCTGT 59.286 45.455 0.00 0.00 46.10 4.00
2124 2346 1.968493 TGACTCAGTAACCAGTCACCC 59.032 52.381 0.00 0.00 43.31 4.61
2205 2427 2.037511 AGTGATGCCAAAACACCCAATG 59.962 45.455 0.00 0.00 35.47 2.82
2211 2433 2.288395 CCTGGAAGTGATGCCAAAACAC 60.288 50.000 0.00 0.00 32.95 3.32
2262 2484 3.229552 GTCGAAAATCTTGTGCTTGCTC 58.770 45.455 0.00 0.00 0.00 4.26
2463 2692 0.107945 CTCCAGTCACCTTAGCCAGC 60.108 60.000 0.00 0.00 0.00 4.85
2495 2724 0.326264 CACTGCTTTAGCTGGGAGGT 59.674 55.000 12.34 0.00 44.81 3.85
2595 2824 6.605594 TGACCTTAAGTCTTTTGTCCATGTTT 59.394 34.615 0.97 0.00 46.46 2.83
2612 2841 3.500448 TGACCACAAGCATGACCTTAA 57.500 42.857 0.00 0.00 0.00 1.85
2773 4770 2.730382 TGGGTTGCAGAGATAGTCGTA 58.270 47.619 0.00 0.00 0.00 3.43
2775 4772 2.159043 ACATGGGTTGCAGAGATAGTCG 60.159 50.000 0.00 0.00 0.00 4.18
2810 4807 1.122632 TGGCCCCAACGAGTAGAACA 61.123 55.000 0.00 0.00 0.00 3.18
2812 4809 0.323629 CTTGGCCCCAACGAGTAGAA 59.676 55.000 0.00 0.00 0.00 2.10
2821 4821 2.806009 GCAGCAAACTTGGCCCCAA 61.806 57.895 0.00 0.00 0.00 4.12
3182 5188 2.513753 TCCATCTTGCAAACCACGAAT 58.486 42.857 0.00 0.00 0.00 3.34
3215 5221 4.039151 TCAACAACAAATGCACGACAAT 57.961 36.364 0.00 0.00 0.00 2.71
3357 10470 3.775316 CCACACCTGTCTTAAGGGAGTAT 59.225 47.826 1.85 0.00 42.11 2.12
3360 10473 1.978580 ACCACACCTGTCTTAAGGGAG 59.021 52.381 1.85 0.00 42.11 4.30
3378 10491 0.527565 CAACAGCTAATGGCACCACC 59.472 55.000 0.00 0.00 44.79 4.61
3523 12401 6.460123 GGCATATCAAGAAACTTATGGTGGTG 60.460 42.308 0.00 0.00 0.00 4.17
3524 12402 5.594317 GGCATATCAAGAAACTTATGGTGGT 59.406 40.000 0.00 0.00 0.00 4.16
3525 12403 5.829924 AGGCATATCAAGAAACTTATGGTGG 59.170 40.000 0.00 0.00 0.00 4.61
3592 12470 0.532862 ATATTCAACTCCGCCGCTGG 60.533 55.000 0.00 0.00 0.00 4.85
3716 12594 9.388672 AGATAGTTTATATAAGGGTAGGTGCAA 57.611 33.333 0.00 0.00 0.00 4.08
3717 12595 8.967779 AGATAGTTTATATAAGGGTAGGTGCA 57.032 34.615 0.00 0.00 0.00 4.57
3737 12622 7.601508 TGCAAGCAAGATATCACACATAGATAG 59.398 37.037 5.32 0.00 32.00 2.08
3759 12644 1.028130 TTCAGTTCGCCAACATGCAA 58.972 45.000 0.00 0.00 34.60 4.08
3837 12728 8.250332 GGAACAGGTCATTATAATTCAAAAGCA 58.750 33.333 0.00 0.00 0.00 3.91
3843 12734 8.768397 ACACTAGGAACAGGTCATTATAATTCA 58.232 33.333 0.00 0.00 0.00 2.57
3920 12811 8.924691 GCAAGCAACAAACAGAAATATTCATAA 58.075 29.630 0.00 0.00 0.00 1.90
3969 12866 0.409092 TGAAACATGGCACCTCCCAT 59.591 50.000 0.00 0.00 46.35 4.00
3973 12870 3.733443 AAAACTGAAACATGGCACCTC 57.267 42.857 0.00 0.00 0.00 3.85
3974 12871 3.450457 TGAAAAACTGAAACATGGCACCT 59.550 39.130 0.00 0.00 0.00 4.00
3976 12873 5.740406 CAATGAAAAACTGAAACATGGCAC 58.260 37.500 0.00 0.00 0.00 5.01
3977 12874 4.272991 GCAATGAAAAACTGAAACATGGCA 59.727 37.500 0.00 0.00 37.69 4.92
3978 12875 4.512571 AGCAATGAAAAACTGAAACATGGC 59.487 37.500 0.00 0.00 37.94 4.40
3980 12877 5.754406 TGGAGCAATGAAAAACTGAAACATG 59.246 36.000 0.00 0.00 0.00 3.21
3981 12878 5.916318 TGGAGCAATGAAAAACTGAAACAT 58.084 33.333 0.00 0.00 0.00 2.71
3982 12879 5.336150 TGGAGCAATGAAAAACTGAAACA 57.664 34.783 0.00 0.00 0.00 2.83
3983 12880 5.580297 TGTTGGAGCAATGAAAAACTGAAAC 59.420 36.000 0.00 0.00 0.00 2.78
3984 12881 5.728471 TGTTGGAGCAATGAAAAACTGAAA 58.272 33.333 0.00 0.00 0.00 2.69
3997 12894 5.646360 GCCTAGTAGTATTTTGTTGGAGCAA 59.354 40.000 0.00 0.00 0.00 3.91
4036 12933 2.164338 GGCGTAAATCCCTCCAAAACA 58.836 47.619 0.00 0.00 0.00 2.83
4037 12934 2.163613 CAGGCGTAAATCCCTCCAAAAC 59.836 50.000 0.00 0.00 0.00 2.43
4046 12943 4.036262 TGCATATTTCACAGGCGTAAATCC 59.964 41.667 0.00 0.00 0.00 3.01
4053 12950 2.162208 ACTGTTGCATATTTCACAGGCG 59.838 45.455 16.20 0.00 0.00 5.52
4054 12951 3.855689 ACTGTTGCATATTTCACAGGC 57.144 42.857 16.20 0.00 0.00 4.85
4076 12973 8.774586 GCTCGGTTCATGTACAAGATAATTATT 58.225 33.333 0.00 0.00 0.00 1.40
4077 12974 7.387948 GGCTCGGTTCATGTACAAGATAATTAT 59.612 37.037 0.00 0.00 0.00 1.28
4078 12975 6.704493 GGCTCGGTTCATGTACAAGATAATTA 59.296 38.462 0.00 0.00 0.00 1.40
4079 12976 5.527582 GGCTCGGTTCATGTACAAGATAATT 59.472 40.000 0.00 0.00 0.00 1.40
4080 12977 5.057149 GGCTCGGTTCATGTACAAGATAAT 58.943 41.667 0.00 0.00 0.00 1.28
4081 12978 4.081365 TGGCTCGGTTCATGTACAAGATAA 60.081 41.667 0.00 0.00 0.00 1.75
4082 12979 3.449377 TGGCTCGGTTCATGTACAAGATA 59.551 43.478 0.00 0.00 0.00 1.98
4083 12980 2.236146 TGGCTCGGTTCATGTACAAGAT 59.764 45.455 0.00 0.00 0.00 2.40
4084 12981 1.621317 TGGCTCGGTTCATGTACAAGA 59.379 47.619 0.00 0.00 0.00 3.02
4085 12982 2.093306 TGGCTCGGTTCATGTACAAG 57.907 50.000 0.00 0.00 0.00 3.16
4086 12983 2.779755 ATGGCTCGGTTCATGTACAA 57.220 45.000 0.00 0.00 0.00 2.41
4087 12984 2.480587 CGTATGGCTCGGTTCATGTACA 60.481 50.000 0.00 0.00 0.00 2.90
4088 12985 2.124903 CGTATGGCTCGGTTCATGTAC 58.875 52.381 0.00 0.00 0.00 2.90
4089 12986 1.067974 CCGTATGGCTCGGTTCATGTA 59.932 52.381 7.84 0.00 42.62 2.29
4090 12987 0.179084 CCGTATGGCTCGGTTCATGT 60.179 55.000 7.84 0.00 42.62 3.21
4091 12988 2.605094 CCGTATGGCTCGGTTCATG 58.395 57.895 7.84 0.00 42.62 3.07
4102 12999 0.713883 GACGATTATGCGCCGTATGG 59.286 55.000 4.18 0.00 36.60 2.74
4103 13000 1.386748 CAGACGATTATGCGCCGTATG 59.613 52.381 14.40 14.40 38.76 2.39
4104 13001 1.698165 CAGACGATTATGCGCCGTAT 58.302 50.000 4.18 0.18 36.60 3.06
4105 13002 0.937699 GCAGACGATTATGCGCCGTA 60.938 55.000 4.18 0.00 36.60 4.02
4106 13003 2.237751 GCAGACGATTATGCGCCGT 61.238 57.895 4.18 6.65 39.41 5.68
4107 13004 2.150809 CTGCAGACGATTATGCGCCG 62.151 60.000 8.42 2.53 45.54 6.46
4108 13005 1.154205 ACTGCAGACGATTATGCGCC 61.154 55.000 23.35 0.00 45.54 6.53
4109 13006 0.042708 CACTGCAGACGATTATGCGC 60.043 55.000 23.35 0.00 45.54 6.09
4110 13007 1.280982 ACACTGCAGACGATTATGCG 58.719 50.000 23.35 0.00 45.54 4.73
4111 13008 2.216488 CGTACACTGCAGACGATTATGC 59.784 50.000 23.35 0.10 42.86 3.14
4112 13009 2.789339 CCGTACACTGCAGACGATTATG 59.211 50.000 23.35 8.81 38.88 1.90
4113 13010 2.686405 TCCGTACACTGCAGACGATTAT 59.314 45.455 23.35 0.00 38.88 1.28
4114 13011 2.086094 TCCGTACACTGCAGACGATTA 58.914 47.619 23.35 6.38 38.88 1.75
4115 13012 0.885879 TCCGTACACTGCAGACGATT 59.114 50.000 23.35 0.00 38.88 3.34
4116 13013 0.452184 CTCCGTACACTGCAGACGAT 59.548 55.000 23.35 4.85 38.88 3.73
4117 13014 0.887836 ACTCCGTACACTGCAGACGA 60.888 55.000 23.35 9.15 38.88 4.20
4118 13015 0.729478 CACTCCGTACACTGCAGACG 60.729 60.000 23.35 19.58 36.36 4.18
4119 13016 0.596577 TCACTCCGTACACTGCAGAC 59.403 55.000 23.35 7.41 0.00 3.51
4120 13017 0.881796 CTCACTCCGTACACTGCAGA 59.118 55.000 23.35 0.00 0.00 4.26
4121 13018 0.598562 ACTCACTCCGTACACTGCAG 59.401 55.000 13.48 13.48 0.00 4.41
4122 13019 1.538512 GTACTCACTCCGTACACTGCA 59.461 52.381 0.00 0.00 37.69 4.41
4123 13020 1.465354 CGTACTCACTCCGTACACTGC 60.465 57.143 0.00 0.00 37.64 4.40
4124 13021 2.071540 TCGTACTCACTCCGTACACTG 58.928 52.381 0.00 0.00 37.64 3.66
4125 13022 2.462456 TCGTACTCACTCCGTACACT 57.538 50.000 0.00 0.00 37.64 3.55
4126 13023 3.618594 TGTATCGTACTCACTCCGTACAC 59.381 47.826 0.00 0.00 37.64 2.90
4127 13024 3.860641 TGTATCGTACTCACTCCGTACA 58.139 45.455 0.00 0.00 37.64 2.90
4128 13025 4.260538 CCTTGTATCGTACTCACTCCGTAC 60.261 50.000 0.00 0.00 35.15 3.67
4129 13026 3.873361 CCTTGTATCGTACTCACTCCGTA 59.127 47.826 0.00 0.00 0.00 4.02
4130 13027 2.681848 CCTTGTATCGTACTCACTCCGT 59.318 50.000 0.00 0.00 0.00 4.69
4131 13028 2.033049 CCCTTGTATCGTACTCACTCCG 59.967 54.545 0.00 0.00 0.00 4.63
4132 13029 3.285484 TCCCTTGTATCGTACTCACTCC 58.715 50.000 0.00 0.00 0.00 3.85
4133 13030 5.282510 CAATCCCTTGTATCGTACTCACTC 58.717 45.833 0.00 0.00 0.00 3.51
4134 13031 4.099573 CCAATCCCTTGTATCGTACTCACT 59.900 45.833 0.00 0.00 0.00 3.41
4135 13032 4.369182 CCAATCCCTTGTATCGTACTCAC 58.631 47.826 0.00 0.00 0.00 3.51
4136 13033 3.181469 GCCAATCCCTTGTATCGTACTCA 60.181 47.826 0.00 0.00 0.00 3.41
4137 13034 3.391049 GCCAATCCCTTGTATCGTACTC 58.609 50.000 0.00 0.00 0.00 2.59
4138 13035 2.223971 CGCCAATCCCTTGTATCGTACT 60.224 50.000 0.00 0.00 0.00 2.73
4139 13036 2.132762 CGCCAATCCCTTGTATCGTAC 58.867 52.381 0.00 0.00 0.00 3.67
4140 13037 1.758280 ACGCCAATCCCTTGTATCGTA 59.242 47.619 0.00 0.00 32.80 3.43
4141 13038 0.539986 ACGCCAATCCCTTGTATCGT 59.460 50.000 0.00 0.00 0.00 3.73
4142 13039 0.937304 CACGCCAATCCCTTGTATCG 59.063 55.000 0.00 0.00 0.00 2.92
4143 13040 2.325583 TCACGCCAATCCCTTGTATC 57.674 50.000 0.00 0.00 0.00 2.24
4144 13041 2.799126 TTCACGCCAATCCCTTGTAT 57.201 45.000 0.00 0.00 0.00 2.29
4145 13042 2.238646 AGATTCACGCCAATCCCTTGTA 59.761 45.455 3.82 0.00 33.79 2.41
4146 13043 1.004745 AGATTCACGCCAATCCCTTGT 59.995 47.619 3.82 0.00 33.79 3.16
4147 13044 1.755179 AGATTCACGCCAATCCCTTG 58.245 50.000 3.82 0.00 33.79 3.61
4148 13045 2.514458 AAGATTCACGCCAATCCCTT 57.486 45.000 3.82 0.00 33.79 3.95
4149 13046 2.771943 TCTAAGATTCACGCCAATCCCT 59.228 45.455 3.82 0.00 33.79 4.20
4150 13047 3.134458 CTCTAAGATTCACGCCAATCCC 58.866 50.000 3.82 0.00 33.79 3.85
4151 13048 4.054671 CTCTCTAAGATTCACGCCAATCC 58.945 47.826 3.82 0.00 33.79 3.01
4152 13049 4.938080 TCTCTCTAAGATTCACGCCAATC 58.062 43.478 0.00 0.00 33.53 2.67
4153 13050 5.537188 GATCTCTCTAAGATTCACGCCAAT 58.463 41.667 0.00 0.00 45.06 3.16
4154 13051 4.498177 CGATCTCTCTAAGATTCACGCCAA 60.498 45.833 0.00 0.00 45.06 4.52
4155 13052 3.003793 CGATCTCTCTAAGATTCACGCCA 59.996 47.826 0.00 0.00 45.06 5.69
4156 13053 3.251245 TCGATCTCTCTAAGATTCACGCC 59.749 47.826 0.00 0.00 45.06 5.68
4157 13054 4.475763 TCGATCTCTCTAAGATTCACGC 57.524 45.455 0.00 0.00 45.06 5.34
4158 13055 4.901314 CGTTCGATCTCTCTAAGATTCACG 59.099 45.833 0.00 0.00 45.06 4.35
4159 13056 5.209240 CCGTTCGATCTCTCTAAGATTCAC 58.791 45.833 0.00 0.00 45.06 3.18
4160 13057 4.882427 ACCGTTCGATCTCTCTAAGATTCA 59.118 41.667 0.00 0.00 45.06 2.57
4161 13058 5.007823 TGACCGTTCGATCTCTCTAAGATTC 59.992 44.000 0.00 0.00 45.06 2.52
4162 13059 4.882427 TGACCGTTCGATCTCTCTAAGATT 59.118 41.667 0.00 0.00 45.06 2.40
4164 13061 3.870274 TGACCGTTCGATCTCTCTAAGA 58.130 45.455 0.00 0.00 38.72 2.10
4165 13062 4.142665 TGTTGACCGTTCGATCTCTCTAAG 60.143 45.833 0.00 0.00 0.00 2.18
4166 13063 3.754850 TGTTGACCGTTCGATCTCTCTAA 59.245 43.478 0.00 0.00 0.00 2.10
4167 13064 3.340928 TGTTGACCGTTCGATCTCTCTA 58.659 45.455 0.00 0.00 0.00 2.43
4168 13065 2.160205 TGTTGACCGTTCGATCTCTCT 58.840 47.619 0.00 0.00 0.00 3.10
4169 13066 2.631418 TGTTGACCGTTCGATCTCTC 57.369 50.000 0.00 0.00 0.00 3.20
4170 13067 4.920640 ATATGTTGACCGTTCGATCTCT 57.079 40.909 0.00 0.00 0.00 3.10
4171 13068 5.629849 CCTTATATGTTGACCGTTCGATCTC 59.370 44.000 0.00 0.00 0.00 2.75
4172 13069 5.301045 TCCTTATATGTTGACCGTTCGATCT 59.699 40.000 0.00 0.00 0.00 2.75
4173 13070 5.401674 GTCCTTATATGTTGACCGTTCGATC 59.598 44.000 0.00 0.00 0.00 3.69
4174 13071 5.287226 GTCCTTATATGTTGACCGTTCGAT 58.713 41.667 0.00 0.00 0.00 3.59
4175 13072 4.440525 GGTCCTTATATGTTGACCGTTCGA 60.441 45.833 0.00 0.00 38.07 3.71
4176 13073 3.800506 GGTCCTTATATGTTGACCGTTCG 59.199 47.826 0.00 0.00 38.07 3.95
4181 13078 5.760253 CAGATGTGGTCCTTATATGTTGACC 59.240 44.000 10.73 10.73 45.99 4.02
4182 13079 5.760253 CCAGATGTGGTCCTTATATGTTGAC 59.240 44.000 0.00 0.00 39.30 3.18
4183 13080 5.665360 TCCAGATGTGGTCCTTATATGTTGA 59.335 40.000 9.03 0.00 45.28 3.18
4184 13081 5.760253 GTCCAGATGTGGTCCTTATATGTTG 59.240 44.000 9.03 0.00 45.28 3.33
4185 13082 5.163195 GGTCCAGATGTGGTCCTTATATGTT 60.163 44.000 16.50 0.00 45.86 2.71
4186 13083 4.348168 GGTCCAGATGTGGTCCTTATATGT 59.652 45.833 16.50 0.00 45.86 2.29
4187 13084 4.899502 GGTCCAGATGTGGTCCTTATATG 58.100 47.826 16.50 0.00 45.86 1.78
4195 13092 2.035632 CTCTAGGGTCCAGATGTGGTC 58.964 57.143 9.03 2.87 45.28 4.02
4196 13093 1.967274 GCTCTAGGGTCCAGATGTGGT 60.967 57.143 9.03 0.00 45.28 4.16
4197 13094 0.755686 GCTCTAGGGTCCAGATGTGG 59.244 60.000 1.45 1.45 46.63 4.17
4198 13095 0.755686 GGCTCTAGGGTCCAGATGTG 59.244 60.000 0.00 0.00 0.00 3.21
4199 13096 0.757188 CGGCTCTAGGGTCCAGATGT 60.757 60.000 4.29 0.00 0.00 3.06
4200 13097 0.468214 TCGGCTCTAGGGTCCAGATG 60.468 60.000 4.29 0.00 0.00 2.90
4201 13098 0.261991 TTCGGCTCTAGGGTCCAGAT 59.738 55.000 4.29 0.00 0.00 2.90
4202 13099 0.040646 TTTCGGCTCTAGGGTCCAGA 59.959 55.000 4.29 0.51 0.00 3.86
4203 13100 1.123928 ATTTCGGCTCTAGGGTCCAG 58.876 55.000 4.29 0.00 0.00 3.86
4204 13101 0.830648 CATTTCGGCTCTAGGGTCCA 59.169 55.000 4.29 0.00 0.00 4.02
4205 13102 1.120530 TCATTTCGGCTCTAGGGTCC 58.879 55.000 0.00 0.00 0.00 4.46
4206 13103 2.981859 TTCATTTCGGCTCTAGGGTC 57.018 50.000 0.00 0.00 0.00 4.46
4207 13104 5.552178 GAATATTCATTTCGGCTCTAGGGT 58.448 41.667 10.68 0.00 0.00 4.34
4208 13105 4.627467 CGAATATTCATTTCGGCTCTAGGG 59.373 45.833 15.57 0.00 41.62 3.53
4209 13106 5.470368 TCGAATATTCATTTCGGCTCTAGG 58.530 41.667 15.57 0.00 44.55 3.02
4210 13107 6.400515 GCTTCGAATATTCATTTCGGCTCTAG 60.401 42.308 15.57 0.00 44.55 2.43
4211 13108 5.405571 GCTTCGAATATTCATTTCGGCTCTA 59.594 40.000 15.57 0.00 44.55 2.43
4212 13109 4.212214 GCTTCGAATATTCATTTCGGCTCT 59.788 41.667 15.57 0.00 44.55 4.09
4213 13110 4.458708 GCTTCGAATATTCATTTCGGCTC 58.541 43.478 15.57 0.00 44.55 4.70
4214 13111 3.251004 GGCTTCGAATATTCATTTCGGCT 59.749 43.478 15.57 0.00 44.55 5.52
4215 13112 3.251004 AGGCTTCGAATATTCATTTCGGC 59.749 43.478 15.57 10.01 44.55 5.54
4216 13113 6.727824 ATAGGCTTCGAATATTCATTTCGG 57.272 37.500 15.57 0.00 44.55 4.30
4220 13117 9.739276 TGGAAATATAGGCTTCGAATATTCATT 57.261 29.630 15.57 1.84 0.00 2.57
4221 13118 9.911788 ATGGAAATATAGGCTTCGAATATTCAT 57.088 29.630 15.57 2.38 0.00 2.57
4222 13119 9.739276 AATGGAAATATAGGCTTCGAATATTCA 57.261 29.630 15.57 0.39 0.00 2.57
4224 13121 9.965902 AGAATGGAAATATAGGCTTCGAATATT 57.034 29.630 0.00 0.00 0.00 1.28
4227 13124 9.965902 ATTAGAATGGAAATATAGGCTTCGAAT 57.034 29.630 0.00 0.00 0.00 3.34
4229 13126 9.871238 GTATTAGAATGGAAATATAGGCTTCGA 57.129 33.333 0.00 0.00 0.00 3.71
4230 13127 9.653287 TGTATTAGAATGGAAATATAGGCTTCG 57.347 33.333 0.00 0.00 0.00 3.79
4240 13137 9.911788 AGTCACAGATTGTATTAGAATGGAAAT 57.088 29.630 0.00 0.00 0.00 2.17
4241 13138 9.739276 AAGTCACAGATTGTATTAGAATGGAAA 57.261 29.630 0.00 0.00 0.00 3.13
4242 13139 9.739276 AAAGTCACAGATTGTATTAGAATGGAA 57.261 29.630 0.00 0.00 0.00 3.53
4243 13140 9.166173 CAAAGTCACAGATTGTATTAGAATGGA 57.834 33.333 0.00 0.00 0.00 3.41
4244 13141 8.950210 ACAAAGTCACAGATTGTATTAGAATGG 58.050 33.333 0.00 0.00 35.63 3.16
4245 13142 9.764870 CACAAAGTCACAGATTGTATTAGAATG 57.235 33.333 0.00 0.00 35.63 2.67
4246 13143 9.725019 TCACAAAGTCACAGATTGTATTAGAAT 57.275 29.630 0.00 0.00 35.63 2.40
4247 13144 9.208022 CTCACAAAGTCACAGATTGTATTAGAA 57.792 33.333 0.00 0.00 35.63 2.10
4248 13145 7.331934 GCTCACAAAGTCACAGATTGTATTAGA 59.668 37.037 0.00 0.00 35.63 2.10
4249 13146 7.118245 TGCTCACAAAGTCACAGATTGTATTAG 59.882 37.037 0.00 0.00 35.63 1.73
4250 13147 6.934083 TGCTCACAAAGTCACAGATTGTATTA 59.066 34.615 0.00 0.00 35.63 0.98
4251 13148 5.764686 TGCTCACAAAGTCACAGATTGTATT 59.235 36.000 0.00 0.00 35.63 1.89
4252 13149 5.308014 TGCTCACAAAGTCACAGATTGTAT 58.692 37.500 0.00 0.00 35.63 2.29
4253 13150 4.702831 TGCTCACAAAGTCACAGATTGTA 58.297 39.130 0.00 0.00 35.63 2.41
4254 13151 3.544684 TGCTCACAAAGTCACAGATTGT 58.455 40.909 0.00 0.00 37.76 2.71
4255 13152 4.285292 GTTGCTCACAAAGTCACAGATTG 58.715 43.478 0.00 0.00 37.58 2.67
4256 13153 3.002656 CGTTGCTCACAAAGTCACAGATT 59.997 43.478 0.00 0.00 37.58 2.40
4257 13154 2.545526 CGTTGCTCACAAAGTCACAGAT 59.454 45.455 0.00 0.00 37.58 2.90
4258 13155 1.933181 CGTTGCTCACAAAGTCACAGA 59.067 47.619 0.00 0.00 37.58 3.41
4259 13156 1.933181 TCGTTGCTCACAAAGTCACAG 59.067 47.619 0.00 0.00 37.58 3.66
4260 13157 2.017138 TCGTTGCTCACAAAGTCACA 57.983 45.000 0.00 0.00 37.58 3.58
4261 13158 3.002246 TGATTCGTTGCTCACAAAGTCAC 59.998 43.478 0.00 0.00 37.58 3.67
4262 13159 3.002246 GTGATTCGTTGCTCACAAAGTCA 59.998 43.478 0.00 0.00 41.13 3.41
4263 13160 3.545633 GTGATTCGTTGCTCACAAAGTC 58.454 45.455 0.00 0.00 41.13 3.01
4264 13161 2.032894 CGTGATTCGTTGCTCACAAAGT 60.033 45.455 2.90 0.00 41.46 2.66
4265 13162 2.563976 CGTGATTCGTTGCTCACAAAG 58.436 47.619 2.90 0.00 41.46 2.77
4266 13163 1.262950 CCGTGATTCGTTGCTCACAAA 59.737 47.619 2.90 0.00 41.46 2.83
4267 13164 0.865111 CCGTGATTCGTTGCTCACAA 59.135 50.000 2.90 0.00 41.46 3.33
4268 13165 0.249699 ACCGTGATTCGTTGCTCACA 60.250 50.000 2.90 0.00 41.46 3.58
4269 13166 1.389106 GTACCGTGATTCGTTGCTCAC 59.611 52.381 0.00 0.00 38.69 3.51
4270 13167 1.271379 AGTACCGTGATTCGTTGCTCA 59.729 47.619 0.00 0.00 37.94 4.26
4271 13168 1.992170 AGTACCGTGATTCGTTGCTC 58.008 50.000 0.00 0.00 37.94 4.26
4272 13169 2.334838 GAAGTACCGTGATTCGTTGCT 58.665 47.619 0.00 0.00 37.94 3.91
4273 13170 1.058695 CGAAGTACCGTGATTCGTTGC 59.941 52.381 10.27 0.00 40.58 4.17
4274 13171 1.652124 CCGAAGTACCGTGATTCGTTG 59.348 52.381 14.88 2.41 43.17 4.10
4275 13172 1.403249 CCCGAAGTACCGTGATTCGTT 60.403 52.381 14.88 0.00 43.17 3.85
4276 13173 0.171903 CCCGAAGTACCGTGATTCGT 59.828 55.000 14.88 0.00 43.17 3.85
4277 13174 1.143969 GCCCGAAGTACCGTGATTCG 61.144 60.000 11.12 11.12 44.04 3.34
4278 13175 1.143969 CGCCCGAAGTACCGTGATTC 61.144 60.000 0.00 0.00 0.00 2.52
4279 13176 1.153706 CGCCCGAAGTACCGTGATT 60.154 57.895 0.00 0.00 0.00 2.57
4280 13177 2.493030 CGCCCGAAGTACCGTGAT 59.507 61.111 0.00 0.00 0.00 3.06
4281 13178 4.424566 GCGCCCGAAGTACCGTGA 62.425 66.667 0.00 0.00 0.00 4.35
4295 13192 4.465512 CTGCATGTTCGGTGGCGC 62.466 66.667 0.00 0.00 0.00 6.53
4296 13193 3.803082 CCTGCATGTTCGGTGGCG 61.803 66.667 0.00 0.00 0.00 5.69
4297 13194 4.120331 GCCTGCATGTTCGGTGGC 62.120 66.667 0.00 0.00 0.00 5.01
4298 13195 2.360350 AGCCTGCATGTTCGGTGG 60.360 61.111 0.00 0.00 0.00 4.61
4299 13196 2.872557 CAGCCTGCATGTTCGGTG 59.127 61.111 0.00 0.00 0.00 4.94
4300 13197 3.058160 GCAGCCTGCATGTTCGGT 61.058 61.111 12.82 0.00 44.26 4.69
4313 13210 2.543641 GAACAATATTTGGGCTGCAGC 58.456 47.619 30.88 30.88 41.14 5.25
4314 13211 2.480073 CCGAACAATATTTGGGCTGCAG 60.480 50.000 10.11 10.11 34.12 4.41
4315 13212 1.476085 CCGAACAATATTTGGGCTGCA 59.524 47.619 0.50 0.00 34.12 4.41
4316 13213 1.802508 GCCGAACAATATTTGGGCTGC 60.803 52.381 6.05 0.00 44.63 5.25
4317 13214 2.208326 GCCGAACAATATTTGGGCTG 57.792 50.000 6.05 0.00 44.63 4.85
4320 13217 2.422127 ACGAAGCCGAACAATATTTGGG 59.578 45.455 0.00 0.00 39.50 4.12
4321 13218 3.757745 ACGAAGCCGAACAATATTTGG 57.242 42.857 0.00 0.00 39.50 3.28
4322 13219 3.778718 CGAACGAAGCCGAACAATATTTG 59.221 43.478 0.00 0.00 39.50 2.32
4323 13220 3.726782 GCGAACGAAGCCGAACAATATTT 60.727 43.478 0.00 0.00 39.50 1.40
4324 13221 2.222953 GCGAACGAAGCCGAACAATATT 60.223 45.455 0.00 0.00 39.50 1.28
4325 13222 1.326548 GCGAACGAAGCCGAACAATAT 59.673 47.619 0.00 0.00 39.50 1.28
4326 13223 0.717224 GCGAACGAAGCCGAACAATA 59.283 50.000 0.00 0.00 39.50 1.90
4327 13224 0.949105 AGCGAACGAAGCCGAACAAT 60.949 50.000 0.00 0.00 39.50 2.71
4328 13225 1.554042 GAGCGAACGAAGCCGAACAA 61.554 55.000 0.00 0.00 39.50 2.83
4329 13226 2.019951 GAGCGAACGAAGCCGAACA 61.020 57.895 0.00 0.00 39.50 3.18
4330 13227 2.770259 GAGCGAACGAAGCCGAAC 59.230 61.111 0.00 0.00 39.50 3.95
4331 13228 2.803670 CGAGCGAACGAAGCCGAA 60.804 61.111 0.00 0.00 39.50 4.30
4332 13229 4.771356 CCGAGCGAACGAAGCCGA 62.771 66.667 0.00 0.00 39.50 5.54
4334 13231 3.479269 CACCGAGCGAACGAAGCC 61.479 66.667 0.00 0.00 35.09 4.35
4335 13232 3.479269 CCACCGAGCGAACGAAGC 61.479 66.667 0.00 0.00 35.09 3.86
4336 13233 3.479269 GCCACCGAGCGAACGAAG 61.479 66.667 0.00 0.00 35.09 3.79
4337 13234 3.986006 AGCCACCGAGCGAACGAA 61.986 61.111 0.00 0.00 38.01 3.85
4338 13235 4.717629 CAGCCACCGAGCGAACGA 62.718 66.667 0.00 0.00 38.01 3.85
4345 13242 4.335647 AACCAGCCAGCCACCGAG 62.336 66.667 0.00 0.00 0.00 4.63
4346 13243 4.329545 GAACCAGCCAGCCACCGA 62.330 66.667 0.00 0.00 0.00 4.69
4348 13245 3.628646 ATCGAACCAGCCAGCCACC 62.629 63.158 0.00 0.00 0.00 4.61
4349 13246 1.675641 AATCGAACCAGCCAGCCAC 60.676 57.895 0.00 0.00 0.00 5.01
4350 13247 1.675310 CAATCGAACCAGCCAGCCA 60.675 57.895 0.00 0.00 0.00 4.75
4351 13248 3.056313 GCAATCGAACCAGCCAGCC 62.056 63.158 0.00 0.00 0.00 4.85
4352 13249 2.486966 GCAATCGAACCAGCCAGC 59.513 61.111 0.00 0.00 0.00 4.85
4353 13250 3.190878 GGCAATCGAACCAGCCAG 58.809 61.111 13.69 0.00 46.26 4.85
4356 13253 2.438868 AAAAAGGCAATCGAACCAGC 57.561 45.000 5.43 0.00 0.00 4.85
4372 13269 7.007723 ACTGAATGATAGGGTTGGTGTAAAAA 58.992 34.615 0.00 0.00 0.00 1.94
4373 13270 6.548321 ACTGAATGATAGGGTTGGTGTAAAA 58.452 36.000 0.00 0.00 0.00 1.52
4374 13271 6.134535 ACTGAATGATAGGGTTGGTGTAAA 57.865 37.500 0.00 0.00 0.00 2.01
4375 13272 5.772393 ACTGAATGATAGGGTTGGTGTAA 57.228 39.130 0.00 0.00 0.00 2.41
4376 13273 5.496556 CAACTGAATGATAGGGTTGGTGTA 58.503 41.667 0.00 0.00 35.18 2.90
4377 13274 4.335416 CAACTGAATGATAGGGTTGGTGT 58.665 43.478 0.00 0.00 35.18 4.16
4378 13275 3.129287 GCAACTGAATGATAGGGTTGGTG 59.871 47.826 0.00 0.00 38.05 4.17
4379 13276 3.245229 TGCAACTGAATGATAGGGTTGGT 60.245 43.478 0.00 0.00 38.05 3.67
4380 13277 3.129287 GTGCAACTGAATGATAGGGTTGG 59.871 47.826 0.00 0.00 38.05 3.77
4381 13278 4.361451 GTGCAACTGAATGATAGGGTTG 57.639 45.455 0.00 0.00 39.83 3.77
4396 13293 4.084171 GGTCTTTTTACGGACTAGTGCAAC 60.084 45.833 15.20 0.00 33.46 4.17
4397 13294 4.060205 GGTCTTTTTACGGACTAGTGCAA 58.940 43.478 15.20 0.00 33.46 4.08
4398 13295 3.069872 TGGTCTTTTTACGGACTAGTGCA 59.930 43.478 15.20 0.00 33.46 4.57
4399 13296 3.656559 TGGTCTTTTTACGGACTAGTGC 58.343 45.455 0.00 0.73 33.46 4.40
4400 13297 3.678548 GCTGGTCTTTTTACGGACTAGTG 59.321 47.826 0.00 0.00 41.17 2.74
4401 13298 3.322828 TGCTGGTCTTTTTACGGACTAGT 59.677 43.478 0.00 0.00 41.17 2.57
4402 13299 3.921677 TGCTGGTCTTTTTACGGACTAG 58.078 45.455 0.00 0.00 41.73 2.57
4403 13300 4.312443 CTTGCTGGTCTTTTTACGGACTA 58.688 43.478 0.00 0.00 33.46 2.59
4404 13301 2.922740 TGCTGGTCTTTTTACGGACT 57.077 45.000 0.00 0.00 33.46 3.85
4405 13302 2.350484 GCTTGCTGGTCTTTTTACGGAC 60.350 50.000 0.00 0.00 0.00 4.79
4406 13303 1.877443 GCTTGCTGGTCTTTTTACGGA 59.123 47.619 0.00 0.00 0.00 4.69
4407 13304 1.880027 AGCTTGCTGGTCTTTTTACGG 59.120 47.619 0.00 0.00 0.00 4.02
4408 13305 3.746492 AGTAGCTTGCTGGTCTTTTTACG 59.254 43.478 5.26 0.00 0.00 3.18
4409 13306 4.143094 CGAGTAGCTTGCTGGTCTTTTTAC 60.143 45.833 5.26 0.00 0.00 2.01
4410 13307 3.994392 CGAGTAGCTTGCTGGTCTTTTTA 59.006 43.478 5.26 0.00 0.00 1.52
4411 13308 2.808543 CGAGTAGCTTGCTGGTCTTTTT 59.191 45.455 5.26 0.00 0.00 1.94
4412 13309 2.224305 ACGAGTAGCTTGCTGGTCTTTT 60.224 45.455 5.26 0.00 0.00 2.27
4413 13310 1.344763 ACGAGTAGCTTGCTGGTCTTT 59.655 47.619 5.26 0.00 0.00 2.52
4414 13311 0.969894 ACGAGTAGCTTGCTGGTCTT 59.030 50.000 5.26 0.00 0.00 3.01
4415 13312 0.969894 AACGAGTAGCTTGCTGGTCT 59.030 50.000 5.26 1.47 0.00 3.85
4416 13313 1.336887 TGAACGAGTAGCTTGCTGGTC 60.337 52.381 5.26 1.18 0.00 4.02
4417 13314 0.679505 TGAACGAGTAGCTTGCTGGT 59.320 50.000 5.26 0.00 0.00 4.00
4418 13315 1.067565 TCTGAACGAGTAGCTTGCTGG 60.068 52.381 5.26 0.00 0.00 4.85
4419 13316 2.354109 TCTGAACGAGTAGCTTGCTG 57.646 50.000 5.26 0.00 0.00 4.41
4420 13317 3.386768 TTTCTGAACGAGTAGCTTGCT 57.613 42.857 0.00 0.00 0.00 3.91
4421 13318 4.468095 TTTTTCTGAACGAGTAGCTTGC 57.532 40.909 0.00 0.00 0.00 4.01
4448 13345 6.658188 TTAATTGATGGAAAACCGGAAGTT 57.342 33.333 9.46 0.00 41.81 2.66
4449 13346 6.658188 TTTAATTGATGGAAAACCGGAAGT 57.342 33.333 9.46 0.00 0.00 3.01
4450 13347 7.954788 TTTTTAATTGATGGAAAACCGGAAG 57.045 32.000 9.46 0.00 0.00 3.46
4490 13387 9.145865 TCTTTCTAAAAACTTGCGAACATTTTT 57.854 25.926 2.83 2.83 37.80 1.94
4491 13388 8.696410 TCTTTCTAAAAACTTGCGAACATTTT 57.304 26.923 0.00 0.00 0.00 1.82
4492 13389 8.871686 ATCTTTCTAAAAACTTGCGAACATTT 57.128 26.923 0.00 0.00 0.00 2.32
4493 13390 9.959749 TTATCTTTCTAAAAACTTGCGAACATT 57.040 25.926 0.00 0.00 0.00 2.71
4494 13391 9.612620 CTTATCTTTCTAAAAACTTGCGAACAT 57.387 29.630 0.00 0.00 0.00 2.71
4495 13392 8.073768 CCTTATCTTTCTAAAAACTTGCGAACA 58.926 33.333 0.00 0.00 0.00 3.18
4496 13393 8.287503 TCCTTATCTTTCTAAAAACTTGCGAAC 58.712 33.333 0.00 0.00 0.00 3.95
4497 13394 8.385898 TCCTTATCTTTCTAAAAACTTGCGAA 57.614 30.769 0.00 0.00 0.00 4.70
4498 13395 7.972832 TCCTTATCTTTCTAAAAACTTGCGA 57.027 32.000 0.00 0.00 0.00 5.10
4499 13396 9.626045 AAATCCTTATCTTTCTAAAAACTTGCG 57.374 29.630 0.00 0.00 0.00 4.85
4532 13429 7.823799 ACATTTTCTTGTGTCCATGAACTTTTT 59.176 29.630 0.00 0.00 35.26 1.94
4533 13430 7.330262 ACATTTTCTTGTGTCCATGAACTTTT 58.670 30.769 0.00 0.00 35.26 2.27
4534 13431 6.877236 ACATTTTCTTGTGTCCATGAACTTT 58.123 32.000 0.00 0.00 35.26 2.66
4535 13432 6.469782 ACATTTTCTTGTGTCCATGAACTT 57.530 33.333 0.00 0.00 35.26 2.66
4536 13433 6.469782 AACATTTTCTTGTGTCCATGAACT 57.530 33.333 0.00 0.00 35.26 3.01
4537 13434 6.509997 GCAAACATTTTCTTGTGTCCATGAAC 60.510 38.462 0.00 0.00 35.26 3.18
4538 13435 5.523188 GCAAACATTTTCTTGTGTCCATGAA 59.477 36.000 0.00 0.00 34.11 2.57
4539 13436 5.049167 GCAAACATTTTCTTGTGTCCATGA 58.951 37.500 0.00 0.00 0.00 3.07
4540 13437 4.084952 CGCAAACATTTTCTTGTGTCCATG 60.085 41.667 0.00 0.00 0.00 3.66
4541 13438 4.050553 CGCAAACATTTTCTTGTGTCCAT 58.949 39.130 0.00 0.00 0.00 3.41
4542 13439 3.129462 TCGCAAACATTTTCTTGTGTCCA 59.871 39.130 0.00 0.00 35.15 4.02
4543 13440 3.701241 TCGCAAACATTTTCTTGTGTCC 58.299 40.909 0.00 0.00 35.15 4.02
4544 13441 5.888412 ATTCGCAAACATTTTCTTGTGTC 57.112 34.783 0.00 0.00 35.15 3.67
4545 13442 5.006552 CCAATTCGCAAACATTTTCTTGTGT 59.993 36.000 0.00 0.00 35.15 3.72
4546 13443 5.233902 TCCAATTCGCAAACATTTTCTTGTG 59.766 36.000 0.00 0.00 34.96 3.33
4547 13444 5.355596 TCCAATTCGCAAACATTTTCTTGT 58.644 33.333 0.00 0.00 0.00 3.16
4548 13445 5.903764 TCCAATTCGCAAACATTTTCTTG 57.096 34.783 0.00 0.00 0.00 3.02
4549 13446 6.917217 TTTCCAATTCGCAAACATTTTCTT 57.083 29.167 0.00 0.00 0.00 2.52
4550 13447 6.917217 TTTTCCAATTCGCAAACATTTTCT 57.083 29.167 0.00 0.00 0.00 2.52
4619 13516 3.626670 CCTGAACTTTTTGCAAATTGGCA 59.373 39.130 13.65 2.48 43.19 4.92
4620 13517 3.876320 TCCTGAACTTTTTGCAAATTGGC 59.124 39.130 13.65 0.00 0.00 4.52
4621 13518 6.622833 ATTCCTGAACTTTTTGCAAATTGG 57.377 33.333 13.65 8.64 0.00 3.16
4622 13519 8.182881 TCAAATTCCTGAACTTTTTGCAAATTG 58.817 29.630 13.65 11.14 0.00 2.32
4623 13520 8.183536 GTCAAATTCCTGAACTTTTTGCAAATT 58.816 29.630 13.65 4.29 0.00 1.82
4624 13521 7.336427 TGTCAAATTCCTGAACTTTTTGCAAAT 59.664 29.630 13.65 0.00 0.00 2.32
4625 13522 6.652481 TGTCAAATTCCTGAACTTTTTGCAAA 59.348 30.769 8.05 8.05 0.00 3.68
4626 13523 6.169094 TGTCAAATTCCTGAACTTTTTGCAA 58.831 32.000 0.00 0.00 0.00 4.08
4627 13524 5.728471 TGTCAAATTCCTGAACTTTTTGCA 58.272 33.333 0.00 0.00 0.00 4.08
4628 13525 6.313658 AGTTGTCAAATTCCTGAACTTTTTGC 59.686 34.615 0.00 0.00 0.00 3.68
4629 13526 7.331687 ACAGTTGTCAAATTCCTGAACTTTTTG 59.668 33.333 7.67 0.00 0.00 2.44
4630 13527 7.386059 ACAGTTGTCAAATTCCTGAACTTTTT 58.614 30.769 7.67 0.00 0.00 1.94
4631 13528 6.935167 ACAGTTGTCAAATTCCTGAACTTTT 58.065 32.000 7.67 0.00 0.00 2.27
4632 13529 6.530019 ACAGTTGTCAAATTCCTGAACTTT 57.470 33.333 7.67 0.00 0.00 2.66
4633 13530 6.152661 TGAACAGTTGTCAAATTCCTGAACTT 59.847 34.615 7.67 0.00 0.00 2.66
4634 13531 5.652014 TGAACAGTTGTCAAATTCCTGAACT 59.348 36.000 7.67 0.00 0.00 3.01
4635 13532 5.743872 GTGAACAGTTGTCAAATTCCTGAAC 59.256 40.000 7.67 0.00 0.00 3.18
4636 13533 5.417266 TGTGAACAGTTGTCAAATTCCTGAA 59.583 36.000 7.67 0.00 0.00 3.02
4637 13534 4.946772 TGTGAACAGTTGTCAAATTCCTGA 59.053 37.500 7.67 0.00 0.00 3.86
4638 13535 5.247507 TGTGAACAGTTGTCAAATTCCTG 57.752 39.130 0.00 0.60 0.00 3.86
4639 13536 5.913137 TTGTGAACAGTTGTCAAATTCCT 57.087 34.783 0.00 0.00 0.00 3.36
4640 13537 7.401080 CAATTTGTGAACAGTTGTCAAATTCC 58.599 34.615 22.21 0.00 42.67 3.01
4641 13538 7.277539 TCCAATTTGTGAACAGTTGTCAAATTC 59.722 33.333 22.21 0.00 42.67 2.17
4642 13539 7.102346 TCCAATTTGTGAACAGTTGTCAAATT 58.898 30.769 20.73 20.73 44.19 1.82
4643 13540 6.638610 TCCAATTTGTGAACAGTTGTCAAAT 58.361 32.000 14.55 14.55 39.38 2.32
4644 13541 6.030548 TCCAATTTGTGAACAGTTGTCAAA 57.969 33.333 12.15 12.15 33.61 2.69
4645 13542 5.651387 TCCAATTTGTGAACAGTTGTCAA 57.349 34.783 0.00 0.00 0.00 3.18
4646 13543 5.651387 TTCCAATTTGTGAACAGTTGTCA 57.349 34.783 0.00 0.00 0.00 3.58
4647 13544 6.367422 TGTTTTCCAATTTGTGAACAGTTGTC 59.633 34.615 0.00 0.00 0.00 3.18
4648 13545 6.226787 TGTTTTCCAATTTGTGAACAGTTGT 58.773 32.000 0.00 0.00 0.00 3.32
4649 13546 6.718454 TGTTTTCCAATTTGTGAACAGTTG 57.282 33.333 0.00 4.55 0.00 3.16
4650 13547 6.966435 CTGTTTTCCAATTTGTGAACAGTT 57.034 33.333 18.72 0.00 39.20 3.16
4652 13549 7.706179 ACATACTGTTTTCCAATTTGTGAACAG 59.294 33.333 22.07 22.07 45.64 3.16
4653 13550 7.490725 CACATACTGTTTTCCAATTTGTGAACA 59.509 33.333 0.00 3.24 35.20 3.18
4654 13551 7.042791 CCACATACTGTTTTCCAATTTGTGAAC 60.043 37.037 0.00 0.00 35.20 3.18
4655 13552 6.983307 CCACATACTGTTTTCCAATTTGTGAA 59.017 34.615 0.00 0.00 35.20 3.18
4656 13553 6.462207 CCCACATACTGTTTTCCAATTTGTGA 60.462 38.462 0.00 0.00 35.20 3.58
4657 13554 5.695816 CCCACATACTGTTTTCCAATTTGTG 59.304 40.000 0.00 0.00 33.51 3.33
4658 13555 5.365314 ACCCACATACTGTTTTCCAATTTGT 59.635 36.000 0.00 0.00 0.00 2.83
4659 13556 5.852827 ACCCACATACTGTTTTCCAATTTG 58.147 37.500 0.00 0.00 0.00 2.32
4660 13557 5.838521 AGACCCACATACTGTTTTCCAATTT 59.161 36.000 0.00 0.00 0.00 1.82
4661 13558 5.243730 CAGACCCACATACTGTTTTCCAATT 59.756 40.000 0.00 0.00 0.00 2.32
4662 13559 4.766891 CAGACCCACATACTGTTTTCCAAT 59.233 41.667 0.00 0.00 0.00 3.16
4663 13560 4.141287 CAGACCCACATACTGTTTTCCAA 58.859 43.478 0.00 0.00 0.00 3.53
4664 13561 3.392947 TCAGACCCACATACTGTTTTCCA 59.607 43.478 0.00 0.00 33.93 3.53
4665 13562 4.015872 TCAGACCCACATACTGTTTTCC 57.984 45.455 0.00 0.00 33.93 3.13
4666 13563 6.385649 TTTTCAGACCCACATACTGTTTTC 57.614 37.500 0.00 0.00 33.93 2.29
4667 13564 6.379988 ACTTTTTCAGACCCACATACTGTTTT 59.620 34.615 0.00 0.00 33.93 2.43
4668 13565 5.891551 ACTTTTTCAGACCCACATACTGTTT 59.108 36.000 0.00 0.00 33.93 2.83
4669 13566 5.445964 ACTTTTTCAGACCCACATACTGTT 58.554 37.500 0.00 0.00 33.93 3.16
4670 13567 5.048846 ACTTTTTCAGACCCACATACTGT 57.951 39.130 0.00 0.00 33.93 3.55
4671 13568 5.530915 TGAACTTTTTCAGACCCACATACTG 59.469 40.000 0.00 0.00 36.79 2.74
4672 13569 5.690865 TGAACTTTTTCAGACCCACATACT 58.309 37.500 0.00 0.00 36.79 2.12
4673 13570 6.206634 TCATGAACTTTTTCAGACCCACATAC 59.793 38.462 0.00 0.00 45.07 2.39
4674 13571 6.303054 TCATGAACTTTTTCAGACCCACATA 58.697 36.000 0.00 0.00 45.07 2.29
4675 13572 5.139727 TCATGAACTTTTTCAGACCCACAT 58.860 37.500 0.00 0.00 45.07 3.21
4676 13573 4.531854 TCATGAACTTTTTCAGACCCACA 58.468 39.130 0.00 0.00 45.07 4.17
4677 13574 5.514274 TTCATGAACTTTTTCAGACCCAC 57.486 39.130 3.38 0.00 45.07 4.61
4678 13575 6.729690 AATTCATGAACTTTTTCAGACCCA 57.270 33.333 11.07 0.00 45.07 4.51
4679 13576 7.176690 TCCTAATTCATGAACTTTTTCAGACCC 59.823 37.037 11.07 0.00 45.07 4.46
4680 13577 8.110860 TCCTAATTCATGAACTTTTTCAGACC 57.889 34.615 11.07 0.00 45.07 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.