Multiple sequence alignment - TraesCS5B01G026200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G026200 chr5B 100.000 9039 0 0 1 9039 24925619 24916581 0.000000e+00 16692.0
1 TraesCS5B01G026200 chr5B 92.702 1014 33 6 2919 3917 79771846 79770859 0.000000e+00 1424.0
2 TraesCS5B01G026200 chr5B 95.161 558 20 5 2919 3473 473797786 473797233 0.000000e+00 874.0
3 TraesCS5B01G026200 chr5A 92.882 4959 227 56 1 4906 22280468 22275583 0.000000e+00 7086.0
4 TraesCS5B01G026200 chr5A 95.418 3754 106 23 4907 8621 22275549 22271823 0.000000e+00 5919.0
5 TraesCS5B01G026200 chr5A 89.494 257 22 3 8785 9039 580928099 580927846 4.070000e-83 320.0
6 TraesCS5B01G026200 chr5D 94.821 4151 129 29 777 4906 33707993 33703908 0.000000e+00 6396.0
7 TraesCS5B01G026200 chr5D 95.198 3769 109 21 4907 8621 33703875 33700125 0.000000e+00 5891.0
8 TraesCS5B01G026200 chr5D 87.730 652 63 11 1 646 33710267 33709627 0.000000e+00 745.0
9 TraesCS5B01G026200 chr5D 89.844 256 21 3 8786 9039 464610875 464610623 3.150000e-84 324.0
10 TraesCS5B01G026200 chr5D 88.846 260 27 2 8782 9039 525594986 525595245 1.460000e-82 318.0
11 TraesCS5B01G026200 chr5D 84.451 328 33 10 2415 2741 497146268 497145958 3.170000e-79 307.0
12 TraesCS5B01G026200 chr5D 83.988 331 35 9 2412 2741 497456622 497456935 1.470000e-77 302.0
13 TraesCS5B01G026200 chr5D 83.841 328 35 9 2415 2741 497235038 497234728 6.860000e-76 296.0
14 TraesCS5B01G026200 chr5D 91.753 97 7 1 672 767 33708073 33707977 5.690000e-27 134.0
15 TraesCS5B01G026200 chr6B 92.998 1014 30 6 2919 3917 481038801 481039788 0.000000e+00 1441.0
16 TraesCS5B01G026200 chr6B 92.702 1014 32 9 2919 3917 123888826 123887840 0.000000e+00 1424.0
17 TraesCS5B01G026200 chr6B 96.547 666 21 2 2919 3583 218966168 218965504 0.000000e+00 1101.0
18 TraesCS5B01G026200 chr6B 95.122 41 1 1 3921 3960 114900615 114900655 7.580000e-06 63.9
19 TraesCS5B01G026200 chr2B 92.899 1014 30 7 2919 3917 467488508 467489494 0.000000e+00 1435.0
20 TraesCS5B01G026200 chr7B 92.702 1014 32 6 2919 3917 513731616 513730630 0.000000e+00 1424.0
21 TraesCS5B01G026200 chr7B 84.112 428 40 15 8614 9039 87822724 87823125 1.100000e-103 388.0
22 TraesCS5B01G026200 chr1A 92.702 1014 32 7 2919 3917 278156591 278157577 0.000000e+00 1424.0
23 TraesCS5B01G026200 chr1A 89.535 258 21 4 8785 9039 507912115 507911861 1.130000e-83 322.0
24 TraesCS5B01G026200 chr1A 91.111 45 3 1 3921 3964 191861310 191861266 9.800000e-05 60.2
25 TraesCS5B01G026200 chr1A 94.737 38 1 1 3924 3960 256821984 256822021 3.530000e-04 58.4
26 TraesCS5B01G026200 chrUn 92.321 560 17 4 3359 3917 410374700 410374166 0.000000e+00 773.0
27 TraesCS5B01G026200 chr3D 88.556 367 36 5 2415 2780 129679076 129678715 3.000000e-119 440.0
28 TraesCS5B01G026200 chr3D 85.047 428 36 15 8614 9039 402495082 402494681 2.350000e-110 411.0
29 TraesCS5B01G026200 chr3D 84.419 430 38 16 8612 9039 547932219 547932621 6.580000e-106 396.0
30 TraesCS5B01G026200 chr3D 79.389 131 24 3 5062 5191 559647232 559647104 1.250000e-13 89.8
31 TraesCS5B01G026200 chr2D 87.568 370 37 6 2412 2780 602417236 602417597 3.900000e-113 420.0
32 TraesCS5B01G026200 chr2D 83.683 429 39 16 8612 9039 448520171 448519773 8.570000e-100 375.0
33 TraesCS5B01G026200 chr2D 84.932 365 32 6 2837 3200 602417603 602417945 1.870000e-91 348.0
34 TraesCS5B01G026200 chr2D 89.453 256 26 1 8785 9039 367987538 367987283 1.130000e-83 322.0
35 TraesCS5B01G026200 chr2D 88.104 269 24 7 8773 9038 587693171 587692908 6.810000e-81 313.0
36 TraesCS5B01G026200 chr2D 84.290 331 34 9 2412 2741 80982375 80982688 3.170000e-79 307.0
37 TraesCS5B01G026200 chr2D 100.000 33 0 0 3924 3956 433022481 433022449 2.730000e-05 62.1
38 TraesCS5B01G026200 chr6A 83.991 431 40 14 8612 9039 573457512 573457108 3.960000e-103 387.0
39 TraesCS5B01G026200 chr1D 82.904 427 45 14 8612 9036 281372425 281372825 8.630000e-95 359.0
40 TraesCS5B01G026200 chr1D 89.189 259 27 1 8782 9039 236080088 236080346 1.130000e-83 322.0
41 TraesCS5B01G026200 chr1D 92.398 171 13 0 8613 8783 196083485 196083655 2.520000e-60 244.0
42 TraesCS5B01G026200 chr7D 89.883 257 23 3 8786 9039 607547996 607547740 2.430000e-85 327.0
43 TraesCS5B01G026200 chr7D 89.494 257 25 2 8785 9039 183773767 183774023 3.150000e-84 324.0
44 TraesCS5B01G026200 chr6D 83.939 330 41 9 2418 2741 438551472 438551149 1.140000e-78 305.0
45 TraesCS5B01G026200 chr3A 80.233 430 57 16 8612 9039 290411240 290410837 1.910000e-76 298.0
46 TraesCS5B01G026200 chr3A 94.737 38 1 1 3924 3960 669525361 669525398 3.530000e-04 58.4
47 TraesCS5B01G026200 chr2A 92.571 175 10 2 8612 8784 41001422 41001595 1.950000e-61 248.0
48 TraesCS5B01G026200 chr4D 82.353 85 5 3 3920 3995 48700980 48700897 2.110000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G026200 chr5B 24916581 24925619 9038 True 16692.0 16692 100.0000 1 9039 1 chr5B.!!$R1 9038
1 TraesCS5B01G026200 chr5B 79770859 79771846 987 True 1424.0 1424 92.7020 2919 3917 1 chr5B.!!$R2 998
2 TraesCS5B01G026200 chr5B 473797233 473797786 553 True 874.0 874 95.1610 2919 3473 1 chr5B.!!$R3 554
3 TraesCS5B01G026200 chr5A 22271823 22280468 8645 True 6502.5 7086 94.1500 1 8621 2 chr5A.!!$R2 8620
4 TraesCS5B01G026200 chr5D 33700125 33710267 10142 True 3291.5 6396 92.3755 1 8621 4 chr5D.!!$R4 8620
5 TraesCS5B01G026200 chr6B 481038801 481039788 987 False 1441.0 1441 92.9980 2919 3917 1 chr6B.!!$F2 998
6 TraesCS5B01G026200 chr6B 123887840 123888826 986 True 1424.0 1424 92.7020 2919 3917 1 chr6B.!!$R1 998
7 TraesCS5B01G026200 chr6B 218965504 218966168 664 True 1101.0 1101 96.5470 2919 3583 1 chr6B.!!$R2 664
8 TraesCS5B01G026200 chr2B 467488508 467489494 986 False 1435.0 1435 92.8990 2919 3917 1 chr2B.!!$F1 998
9 TraesCS5B01G026200 chr7B 513730630 513731616 986 True 1424.0 1424 92.7020 2919 3917 1 chr7B.!!$R1 998
10 TraesCS5B01G026200 chr1A 278156591 278157577 986 False 1424.0 1424 92.7020 2919 3917 1 chr1A.!!$F2 998
11 TraesCS5B01G026200 chrUn 410374166 410374700 534 True 773.0 773 92.3210 3359 3917 1 chrUn.!!$R1 558
12 TraesCS5B01G026200 chr2D 602417236 602417945 709 False 384.0 420 86.2500 2412 3200 2 chr2D.!!$F2 788

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 601 0.107312 TCTTCCTCCTCTACCGTCCG 60.107 60.000 0.00 0.00 0.00 4.79 F
1728 3278 0.609957 TGGAATCACCCTTGCTGCTG 60.610 55.000 0.00 0.00 38.00 4.41 F
1924 3476 0.301687 GTGTCGTCTTGTGCACACAG 59.698 55.000 21.56 19.09 42.94 3.66 F
1998 3551 1.003545 CAGAAAGTGTGCAGTTGGACG 60.004 52.381 0.00 0.00 39.39 4.79 F
3233 4799 1.073199 CCGTATGCCCCAAGATCCC 59.927 63.158 0.00 0.00 0.00 3.85 F
3996 5585 1.073125 TGCATTTTGAGACGGAGGGAA 59.927 47.619 0.00 0.00 0.00 3.97 F
5197 6836 1.620822 CAGCAACCAAACTAGCCCTT 58.379 50.000 0.00 0.00 0.00 3.95 F
5480 7119 1.338105 CGTCCTGATGAAGAGGTTGCA 60.338 52.381 0.00 0.00 31.85 4.08 F
6163 7836 1.515521 CCCCTGCCTTCAACGACAAC 61.516 60.000 0.00 0.00 0.00 3.32 F
7733 9412 0.875059 CGTTCTTTTCCCTGCTGACC 59.125 55.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 3298 0.251165 TAGGGCACAAGCTTGGTTCC 60.251 55.000 29.18 23.82 41.70 3.62 R
3462 5043 0.396556 TATAGCGTCCCAGTGCTCCA 60.397 55.000 0.00 0.00 42.48 3.86 R
3553 5134 1.396996 GTTACTTGCTACCCATGTGCG 59.603 52.381 0.00 0.00 34.15 5.34 R
3977 5566 1.821216 TTCCCTCCGTCTCAAAATGC 58.179 50.000 0.00 0.00 0.00 3.56 R
4496 6086 2.010145 TTGTCTAGATGAGCAACGGC 57.990 50.000 0.00 0.00 41.61 5.68 R
5477 7116 0.909133 TGCCCCAGTACTCATCTGCA 60.909 55.000 0.00 0.00 0.00 4.41 R
6577 8252 1.135972 GCCAGCACAACATAACAGACG 60.136 52.381 0.00 0.00 0.00 4.18 R
7101 8780 1.601903 TCACAGACACAATCAAACGCC 59.398 47.619 0.00 0.00 0.00 5.68 R
8029 9722 0.036952 ATGTCCAGGCTCACAAGTCG 60.037 55.000 0.09 0.00 30.24 4.18 R
8705 10402 0.034756 CTCCCGTGGTCATGTCAACA 59.965 55.000 0.00 0.00 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
130 132 3.356290 AGCGCTCATTTCCATTTTAGGT 58.644 40.909 2.64 0.00 0.00 3.08
207 213 4.758251 TGGATGAGCACGCACCGG 62.758 66.667 0.00 0.00 0.00 5.28
235 241 1.206132 TGGAAGTATGCTACACCACCG 59.794 52.381 0.00 0.00 34.35 4.94
277 284 1.499056 GTGCGGCAGTGACATCTTG 59.501 57.895 1.18 0.00 0.00 3.02
281 288 1.804151 GCGGCAGTGACATCTTGTTTA 59.196 47.619 0.00 0.00 0.00 2.01
291 298 4.595781 TGACATCTTGTTTAGGTACCAGGT 59.404 41.667 15.94 0.00 0.00 4.00
295 302 6.043474 ACATCTTGTTTAGGTACCAGGTACAA 59.957 38.462 27.85 15.77 40.41 2.41
297 304 6.897986 TCTTGTTTAGGTACCAGGTACAAAA 58.102 36.000 27.85 22.82 40.41 2.44
303 310 3.202595 AGGTACCAGGTACAAAAACACCA 59.797 43.478 27.85 0.00 40.41 4.17
308 315 2.032426 CAGGTACAAAAACACCACGGAC 59.968 50.000 0.00 0.00 37.28 4.79
323 330 1.065401 ACGGACGACACACGAAAACTA 59.935 47.619 0.00 0.00 45.77 2.24
327 334 3.111098 GACGACACACGAAAACTACAGT 58.889 45.455 0.00 0.00 45.77 3.55
398 405 1.469940 CGAGACATGAAAGTCCCTCGG 60.470 57.143 0.00 0.00 39.34 4.63
401 408 1.299648 CATGAAAGTCCCTCGGGCA 59.700 57.895 0.00 0.00 34.68 5.36
404 411 1.072505 GAAAGTCCCTCGGGCACAA 59.927 57.895 0.00 0.00 34.68 3.33
416 423 4.110482 CTCGGGCACAACTAATGTACTAC 58.890 47.826 0.00 0.00 41.46 2.73
417 424 3.765511 TCGGGCACAACTAATGTACTACT 59.234 43.478 0.00 0.00 41.46 2.57
418 425 4.110482 CGGGCACAACTAATGTACTACTC 58.890 47.826 0.00 0.00 41.46 2.59
419 426 4.439968 GGGCACAACTAATGTACTACTCC 58.560 47.826 0.00 0.00 41.46 3.85
420 427 4.161754 GGGCACAACTAATGTACTACTCCT 59.838 45.833 0.00 0.00 41.46 3.69
421 428 5.361857 GGGCACAACTAATGTACTACTCCTA 59.638 44.000 0.00 0.00 41.46 2.94
469 476 2.254546 ACATCACGTGGAGAAGCAAA 57.745 45.000 17.00 0.00 0.00 3.68
470 477 2.571212 ACATCACGTGGAGAAGCAAAA 58.429 42.857 17.00 0.00 0.00 2.44
472 479 3.569701 ACATCACGTGGAGAAGCAAAAAT 59.430 39.130 17.00 0.00 0.00 1.82
476 483 3.976942 CACGTGGAGAAGCAAAAATTCTG 59.023 43.478 7.95 0.00 37.14 3.02
479 486 2.030007 TGGAGAAGCAAAAATTCTGGCG 60.030 45.455 0.00 0.00 37.14 5.69
485 492 1.596727 GCAAAAATTCTGGCGTGCAAA 59.403 42.857 0.00 0.00 32.29 3.68
518 526 1.386533 TCCTTACGAAGAGGTAGCCG 58.613 55.000 0.00 0.00 35.71 5.52
523 531 2.122167 CGAAGAGGTAGCCGGCTCT 61.122 63.158 36.73 25.94 0.00 4.09
528 536 2.104530 GGTAGCCGGCTCTTCGAC 59.895 66.667 36.73 25.15 0.00 4.20
534 542 2.870161 CGGCTCTTCGACACGACG 60.870 66.667 0.00 0.00 34.89 5.12
542 550 0.110056 TTCGACACGACGTCTAAGCC 60.110 55.000 14.70 0.00 42.98 4.35
558 566 1.028330 AGCCATGTCGAGTGCCATTG 61.028 55.000 0.00 0.00 0.00 2.82
585 594 1.988293 CCGATGCTCTTCCTCCTCTA 58.012 55.000 0.00 0.00 0.00 2.43
592 601 0.107312 TCTTCCTCCTCTACCGTCCG 60.107 60.000 0.00 0.00 0.00 4.79
594 603 3.217743 CCTCCTCTACCGTCCGCC 61.218 72.222 0.00 0.00 0.00 6.13
595 604 2.124236 CTCCTCTACCGTCCGCCT 60.124 66.667 0.00 0.00 0.00 5.52
597 606 3.584052 CCTCTACCGTCCGCCTCG 61.584 72.222 0.00 0.00 0.00 4.63
636 647 9.783256 AATATTCCTTTTCGAAGAAAATTACCG 57.217 29.630 8.18 0.00 45.90 4.02
646 657 8.462143 TCGAAGAAAATTACCGAGATATATGC 57.538 34.615 0.00 0.00 0.00 3.14
648 659 8.162880 CGAAGAAAATTACCGAGATATATGCAC 58.837 37.037 0.00 0.00 0.00 4.57
649 660 8.902540 AAGAAAATTACCGAGATATATGCACA 57.097 30.769 0.00 0.00 0.00 4.57
650 661 8.539770 AGAAAATTACCGAGATATATGCACAG 57.460 34.615 0.00 0.00 0.00 3.66
651 662 6.727824 AAATTACCGAGATATATGCACAGC 57.272 37.500 0.00 0.00 0.00 4.40
653 664 3.751479 ACCGAGATATATGCACAGCAA 57.249 42.857 0.00 0.00 43.62 3.91
654 665 4.071961 ACCGAGATATATGCACAGCAAA 57.928 40.909 0.00 0.00 43.62 3.68
734 2280 1.880340 CCGGCTCTAGAAAGCGCTG 60.880 63.158 12.58 0.00 43.45 5.18
769 2315 2.818274 GGCGCGGTCCGATTCTTT 60.818 61.111 17.49 0.00 40.02 2.52
770 2316 2.396157 GGCGCGGTCCGATTCTTTT 61.396 57.895 17.49 0.00 40.02 2.27
771 2317 1.500396 GCGCGGTCCGATTCTTTTT 59.500 52.632 17.49 0.00 40.02 1.94
799 2345 1.371881 GCGGTCCGATTCGATCTCC 60.372 63.158 17.49 3.57 0.00 3.71
909 2455 5.655974 TCGATTCAATCCAAATCCAAATCCA 59.344 36.000 0.00 0.00 30.84 3.41
910 2456 6.154192 TCGATTCAATCCAAATCCAAATCCAA 59.846 34.615 0.00 0.00 30.84 3.53
911 2457 6.817641 CGATTCAATCCAAATCCAAATCCAAA 59.182 34.615 0.00 0.00 30.84 3.28
912 2458 7.496591 CGATTCAATCCAAATCCAAATCCAAAT 59.503 33.333 0.00 0.00 30.84 2.32
913 2459 8.741603 ATTCAATCCAAATCCAAATCCAAATC 57.258 30.769 0.00 0.00 0.00 2.17
914 2460 6.652053 TCAATCCAAATCCAAATCCAAATCC 58.348 36.000 0.00 0.00 0.00 3.01
929 2475 6.543430 TCCAAATCCAAATCCAAATCGATT 57.457 33.333 4.39 4.39 33.84 3.34
1135 2681 0.675837 GCTCCGACAAACCCTAACCC 60.676 60.000 0.00 0.00 0.00 4.11
1136 2682 0.981943 CTCCGACAAACCCTAACCCT 59.018 55.000 0.00 0.00 0.00 4.34
1137 2683 2.181975 CTCCGACAAACCCTAACCCTA 58.818 52.381 0.00 0.00 0.00 3.53
1138 2684 1.901833 TCCGACAAACCCTAACCCTAC 59.098 52.381 0.00 0.00 0.00 3.18
1529 3077 7.991460 TGGATTGGATGAATAGATAGATGCATC 59.009 37.037 19.37 19.37 40.11 3.91
1559 3109 2.996249 AGATTCTGATCATGCCGTGT 57.004 45.000 0.00 0.00 34.60 4.49
1575 3125 1.847999 CGTGTGCGGGTTATTACGTAG 59.152 52.381 0.00 0.00 0.00 3.51
1578 3128 0.822811 TGCGGGTTATTACGTAGGCA 59.177 50.000 0.00 0.00 0.00 4.75
1582 3132 2.803956 CGGGTTATTACGTAGGCAATGG 59.196 50.000 0.00 0.00 0.00 3.16
1644 3194 4.687219 GCCCAGTGAAGCTTTAGGTATCAT 60.687 45.833 0.00 0.00 0.00 2.45
1645 3195 5.454755 GCCCAGTGAAGCTTTAGGTATCATA 60.455 44.000 0.00 0.00 0.00 2.15
1658 3208 3.557185 AGGTATCATATATGCATTGCGCG 59.443 43.478 3.54 0.00 46.97 6.86
1661 3211 1.464219 TCATATATGCATTGCGCGGTG 59.536 47.619 8.83 5.03 46.97 4.94
1662 3212 1.197492 CATATATGCATTGCGCGGTGT 59.803 47.619 8.83 0.00 46.97 4.16
1698 3248 6.093633 GTGGTTTGGTCAATAGGTATGTTCTC 59.906 42.308 0.00 0.00 0.00 2.87
1701 3251 5.925506 TGGTCAATAGGTATGTTCTCGAA 57.074 39.130 0.00 0.00 0.00 3.71
1724 3274 3.782523 TCTAGATTGGAATCACCCTTGCT 59.217 43.478 2.32 0.00 37.89 3.91
1726 3276 1.135721 GATTGGAATCACCCTTGCTGC 59.864 52.381 0.00 0.00 38.00 5.25
1728 3278 0.609957 TGGAATCACCCTTGCTGCTG 60.610 55.000 0.00 0.00 38.00 4.41
1729 3279 1.318158 GGAATCACCCTTGCTGCTGG 61.318 60.000 0.00 3.18 0.00 4.85
1748 3298 0.844660 GGGGGCTAAAGGGAGTTAGG 59.155 60.000 0.00 0.00 32.62 2.69
1772 3323 1.474077 CCAAGCTTGTGCCCTATGTTC 59.526 52.381 24.35 0.00 40.80 3.18
1844 3395 4.485834 CACTTGCATGCGCGCCAT 62.486 61.111 30.77 18.98 42.97 4.40
1904 3456 6.742718 CGATGGATTAATTCGCCAATATTGTC 59.257 38.462 14.25 0.05 34.95 3.18
1924 3476 0.301687 GTGTCGTCTTGTGCACACAG 59.698 55.000 21.56 19.09 42.94 3.66
1943 3495 6.147821 CACACAGTAGTTTGTTATCCTCCTTG 59.852 42.308 0.00 0.00 0.00 3.61
1949 3501 9.710818 AGTAGTTTGTTATCCTCCTTGTATCTA 57.289 33.333 0.00 0.00 0.00 1.98
1998 3551 1.003545 CAGAAAGTGTGCAGTTGGACG 60.004 52.381 0.00 0.00 39.39 4.79
2218 3779 2.028294 ACTGTTGATGCTCTGTCTCCAG 60.028 50.000 0.00 0.00 40.25 3.86
2266 3828 9.620259 AGGAGAAAGAAAAATATGATGGTCTAC 57.380 33.333 0.00 0.00 0.00 2.59
2365 3927 7.089770 TCACTTTATGCTTTTGTGTTGTACA 57.910 32.000 0.00 0.00 37.56 2.90
2381 3943 9.414295 TGTGTTGTACAAGTCATAATAGTACAC 57.586 33.333 8.98 9.79 43.10 2.90
2456 4018 6.599638 CCCACTTTAAACTATTCTGAGGGAAG 59.400 42.308 0.00 0.00 37.36 3.46
2536 4098 3.696051 TGCATTTATTCCTTGAGCTGGTC 59.304 43.478 0.00 0.00 0.00 4.02
2790 4352 4.161565 ACTGAAGAGGCATCCGTAAACATA 59.838 41.667 0.00 0.00 0.00 2.29
2793 4355 6.220930 TGAAGAGGCATCCGTAAACATATAC 58.779 40.000 0.00 0.00 0.00 1.47
2880 4442 6.584185 AAGGTATGTGTTATTTTCCACACC 57.416 37.500 0.00 0.00 43.75 4.16
3000 4562 8.385898 TCATAAGAAAACGGTGTTGTTCTAAT 57.614 30.769 0.00 0.00 30.24 1.73
3233 4799 1.073199 CCGTATGCCCCAAGATCCC 59.927 63.158 0.00 0.00 0.00 3.85
3424 5005 8.797436 ATTAGCCAAATTAATCCCCATTACTT 57.203 30.769 0.00 0.00 0.00 2.24
3462 5043 9.416794 TGCAACATCGTAATTTTATTTGAATGT 57.583 25.926 0.00 0.00 0.00 2.71
3473 5054 1.619654 TTTGAATGTGGAGCACTGGG 58.380 50.000 0.00 0.00 35.11 4.45
3488 5069 1.762957 ACTGGGACGCTATATTGCTGT 59.237 47.619 7.54 6.91 0.00 4.40
3553 5134 9.334693 CTACTTTAGTGACTTGAATTTTCATGC 57.665 33.333 0.00 1.78 37.00 4.06
3674 5261 1.679944 GCCTCAATGCTGGAGTGCTAA 60.680 52.381 0.00 0.00 0.00 3.09
3731 5318 6.926272 CCTGAAGTTCTACTTATATCTGGCAC 59.074 42.308 4.17 0.00 38.80 5.01
3732 5319 7.201956 CCTGAAGTTCTACTTATATCTGGCACT 60.202 40.741 4.17 0.00 38.80 4.40
3733 5320 7.492524 TGAAGTTCTACTTATATCTGGCACTG 58.507 38.462 4.17 0.00 38.80 3.66
3734 5321 6.412362 AGTTCTACTTATATCTGGCACTGG 57.588 41.667 0.00 0.00 0.00 4.00
3735 5322 4.873746 TCTACTTATATCTGGCACTGGC 57.126 45.455 0.00 0.00 40.13 4.85
3736 5323 4.223144 TCTACTTATATCTGGCACTGGCA 58.777 43.478 5.02 5.02 43.71 4.92
3743 5330 1.825090 TCTGGCACTGGCAAGTTATG 58.175 50.000 6.75 0.00 42.10 1.90
3949 5538 6.214412 ACTCCCTCTGTCTCAAAATGTAAGAT 59.786 38.462 0.00 0.00 0.00 2.40
3977 5566 5.651172 TGACAGTGTCAAAATACGTCTTG 57.349 39.130 23.55 0.00 39.78 3.02
3996 5585 1.073125 TGCATTTTGAGACGGAGGGAA 59.927 47.619 0.00 0.00 0.00 3.97
4008 5597 7.008332 TGAGACGGAGGGAATATTTGATACTA 58.992 38.462 0.00 0.00 0.00 1.82
4806 6396 5.839262 TTTACGAGTCATGTTACTTGCTG 57.161 39.130 0.00 0.00 34.67 4.41
4959 6582 4.272489 TGCATAGCTCAGGCAAATAGTTT 58.728 39.130 4.58 0.00 41.89 2.66
5128 6767 3.070446 TCACCAGGCTAGAAAACTCGAAA 59.930 43.478 0.00 0.00 0.00 3.46
5138 6777 3.519913 AGAAAACTCGAAATCCTAGGCCT 59.480 43.478 11.78 11.78 0.00 5.19
5197 6836 1.620822 CAGCAACCAAACTAGCCCTT 58.379 50.000 0.00 0.00 0.00 3.95
5235 6874 3.976015 TCTTGAGGGTGTTGGTTCTTTT 58.024 40.909 0.00 0.00 0.00 2.27
5357 6996 7.918076 AGATTGGTTTACAGATGACTTTCCTA 58.082 34.615 0.00 0.00 0.00 2.94
5477 7116 1.550976 GGTCGTCCTGATGAAGAGGTT 59.449 52.381 0.00 0.00 31.85 3.50
5480 7119 1.338105 CGTCCTGATGAAGAGGTTGCA 60.338 52.381 0.00 0.00 31.85 4.08
5629 7268 7.102847 AGTAGCCACTACTCTTAACTGAATC 57.897 40.000 1.40 0.00 42.87 2.52
5631 7270 5.725362 AGCCACTACTCTTAACTGAATCAC 58.275 41.667 0.00 0.00 0.00 3.06
5775 7414 4.130118 GGTATCGGCAAGTCAAATCATCT 58.870 43.478 0.00 0.00 0.00 2.90
5925 7598 8.950007 AGAATCCCTTTTCAAACCTATGTAAA 57.050 30.769 0.00 0.00 0.00 2.01
5938 7611 9.139174 CAAACCTATGTAAATTGTGATCAAACC 57.861 33.333 0.00 0.00 37.11 3.27
5941 7614 4.167554 TGTAAATTGTGATCAAACCGGC 57.832 40.909 0.00 0.00 37.11 6.13
5943 7616 2.723124 AATTGTGATCAAACCGGCAC 57.277 45.000 0.00 0.03 37.11 5.01
6074 7747 3.772387 TCATTGACAGGGCCAATACAAA 58.228 40.909 6.18 0.00 33.35 2.83
6163 7836 1.515521 CCCCTGCCTTCAACGACAAC 61.516 60.000 0.00 0.00 0.00 3.32
6309 7982 3.501548 GAGACGACGAGCGCCTCT 61.502 66.667 2.29 0.00 44.75 3.69
6327 8000 4.192317 CCTCTTGGTTGCTGAGGTATTAC 58.808 47.826 0.00 0.00 41.64 1.89
6353 8028 2.158769 TCCCGCATATCATTCTTGTGCT 60.159 45.455 0.00 0.00 33.82 4.40
6498 8173 5.009410 CAGAGATGGAGATAAATTGGTTGCC 59.991 44.000 0.00 0.00 0.00 4.52
6577 8252 6.128063 ACGTATGGAGTAAGTATAATCGCCTC 60.128 42.308 0.00 0.00 0.00 4.70
6596 8271 2.412870 TCGTCTGTTATGTTGTGCTGG 58.587 47.619 0.00 0.00 0.00 4.85
6604 8279 2.228138 ATGTTGTGCTGGCAAAGTTG 57.772 45.000 0.00 0.00 0.00 3.16
6680 8356 7.305993 CGTCTGTTTTCTTTTGTTTTATCTGCC 60.306 37.037 0.00 0.00 0.00 4.85
6715 8394 5.552178 AGAGCCTTCTTACGACAAAATCTT 58.448 37.500 0.00 0.00 0.00 2.40
6799 8478 5.130145 CACTCCTCTTGTATCAAATCTCCCT 59.870 44.000 0.00 0.00 0.00 4.20
7101 8780 7.820648 ACTATTACACTTTCCAATTTGCAGAG 58.179 34.615 0.00 0.00 0.00 3.35
7135 8814 3.265791 GTCTGTGAGTTGGCAGGATAAG 58.734 50.000 0.00 0.00 33.81 1.73
7356 9035 4.648651 TCTTGCTTTGAGTTACTTACCCC 58.351 43.478 0.00 0.00 0.00 4.95
7373 9052 8.037723 ACTTACCCCAAGAAGTAGAAAAACTA 57.962 34.615 0.00 0.00 37.71 2.24
7396 9075 4.762251 ACTGGAGGAAAAACATAGAAGCAC 59.238 41.667 0.00 0.00 0.00 4.40
7726 9405 5.766174 TGTTTATGTAAGCGTTCTTTTCCCT 59.234 36.000 0.00 0.00 33.85 4.20
7733 9412 0.875059 CGTTCTTTTCCCTGCTGACC 59.125 55.000 0.00 0.00 0.00 4.02
7755 9434 4.860907 CCTTGTTTGTTATTCTCTGCATGC 59.139 41.667 11.82 11.82 0.00 4.06
7991 9684 8.704234 CAGAAACAACAACAATAGTAGAGTCTC 58.296 37.037 0.00 0.00 0.00 3.36
8077 9770 2.695147 CTGATTGGTTAATTGGGGCCTC 59.305 50.000 0.84 0.00 0.00 4.70
8095 9789 1.603455 CGGGGGACAATTGTGCTGT 60.603 57.895 26.43 0.00 36.56 4.40
8130 9824 1.272037 TGAGGACAAATGATGGCAGCA 60.272 47.619 8.33 8.33 39.66 4.41
8136 9830 0.384309 AAATGATGGCAGCAGCATCG 59.616 50.000 12.39 0.00 44.61 3.84
8137 9831 0.464916 AATGATGGCAGCAGCATCGA 60.465 50.000 12.39 0.00 44.61 3.59
8138 9832 1.164662 ATGATGGCAGCAGCATCGAC 61.165 55.000 12.39 0.00 44.61 4.20
8139 9833 1.523258 GATGGCAGCAGCATCGACT 60.523 57.895 2.65 0.00 44.61 4.18
8140 9834 1.773054 GATGGCAGCAGCATCGACTG 61.773 60.000 2.65 0.00 44.61 3.51
8141 9835 2.125391 GGCAGCAGCATCGACTGA 60.125 61.111 2.65 0.00 44.61 3.41
8142 9836 1.742880 GGCAGCAGCATCGACTGAA 60.743 57.895 2.65 0.00 44.61 3.02
8182 9878 2.483014 TGTAAAGGAACCGACATGGG 57.517 50.000 0.00 0.00 44.64 4.00
8260 9956 6.279513 AGCTGATAACTGCAGATATAGACC 57.720 41.667 23.35 7.07 42.14 3.85
8305 10001 2.161030 GTATTTTGGTTACCGGGTGCA 58.839 47.619 10.66 0.00 0.00 4.57
8310 10006 1.214325 GGTTACCGGGTGCATTTGC 59.786 57.895 10.66 0.00 42.50 3.68
8341 10038 4.310022 TTTAATGGGGTCGAGAAATGGT 57.690 40.909 0.00 0.00 0.00 3.55
8378 10075 9.882996 TTATTATATATATATATACCGCCGCGC 57.117 33.333 18.23 0.00 32.47 6.86
8379 10076 7.558161 TTATATATATATATACCGCCGCGCT 57.442 36.000 18.23 0.00 32.47 5.92
8380 10077 2.417339 ATATATATACCGCCGCGCTG 57.583 50.000 7.42 0.00 0.00 5.18
8472 10169 2.105006 ATACAGCTGCAACCTGAGTG 57.895 50.000 15.27 0.00 34.47 3.51
8473 10170 0.758734 TACAGCTGCAACCTGAGTGT 59.241 50.000 15.27 3.11 34.47 3.55
8483 10180 4.461081 TGCAACCTGAGTGTAGTTTTTGTT 59.539 37.500 0.00 0.00 0.00 2.83
8496 10193 3.580895 AGTTTTTGTTGTCCTTGTTGGGT 59.419 39.130 0.00 0.00 36.20 4.51
8503 10200 0.951040 GTCCTTGTTGGGTCTCGCTG 60.951 60.000 0.00 0.00 36.20 5.18
8534 10231 1.610522 GCAGTTCTGTTTGTGCCAGAT 59.389 47.619 1.78 0.00 38.66 2.90
8537 10234 1.873591 GTTCTGTTTGTGCCAGATCGT 59.126 47.619 0.00 0.00 38.66 3.73
8588 10285 1.423845 CTCAATAACGTGCACCCGC 59.576 57.895 12.15 0.00 39.24 6.13
8590 10287 3.122323 AATAACGTGCACCCGCCG 61.122 61.111 12.15 0.95 37.32 6.46
8621 10318 3.853330 CATCAGCGCCGTGGTTCG 61.853 66.667 2.29 0.00 39.52 3.95
8622 10319 4.063967 ATCAGCGCCGTGGTTCGA 62.064 61.111 2.29 0.00 42.86 3.71
8623 10320 3.989698 ATCAGCGCCGTGGTTCGAG 62.990 63.158 2.29 0.00 42.86 4.04
8624 10321 4.717629 CAGCGCCGTGGTTCGAGA 62.718 66.667 2.29 0.00 42.86 4.04
8625 10322 3.986006 AGCGCCGTGGTTCGAGAA 61.986 61.111 2.29 0.00 42.86 2.87
8626 10323 3.479269 GCGCCGTGGTTCGAGAAG 61.479 66.667 0.00 0.00 42.86 2.85
8627 10324 2.257371 CGCCGTGGTTCGAGAAGA 59.743 61.111 0.00 0.00 42.86 2.87
8628 10325 1.153823 CGCCGTGGTTCGAGAAGAT 60.154 57.895 0.00 0.00 42.86 2.40
8629 10326 1.413767 CGCCGTGGTTCGAGAAGATG 61.414 60.000 0.00 0.00 42.86 2.90
8630 10327 1.696832 GCCGTGGTTCGAGAAGATGC 61.697 60.000 0.00 0.00 42.86 3.91
8631 10328 0.389817 CCGTGGTTCGAGAAGATGCA 60.390 55.000 0.00 0.00 42.86 3.96
8632 10329 1.428448 CGTGGTTCGAGAAGATGCAA 58.572 50.000 0.00 0.00 42.86 4.08
8633 10330 1.391485 CGTGGTTCGAGAAGATGCAAG 59.609 52.381 0.00 0.00 42.86 4.01
8634 10331 1.129437 GTGGTTCGAGAAGATGCAAGC 59.871 52.381 0.00 0.00 0.00 4.01
8635 10332 0.729690 GGTTCGAGAAGATGCAAGCC 59.270 55.000 0.00 0.00 0.00 4.35
8636 10333 0.371645 GTTCGAGAAGATGCAAGCCG 59.628 55.000 0.00 0.00 0.00 5.52
8637 10334 0.246360 TTCGAGAAGATGCAAGCCGA 59.754 50.000 0.00 0.00 0.00 5.54
8638 10335 0.458543 TCGAGAAGATGCAAGCCGAC 60.459 55.000 0.00 0.00 0.00 4.79
8639 10336 0.737367 CGAGAAGATGCAAGCCGACA 60.737 55.000 0.00 0.00 0.00 4.35
8640 10337 1.661341 GAGAAGATGCAAGCCGACAT 58.339 50.000 0.00 0.00 0.00 3.06
8641 10338 1.329906 GAGAAGATGCAAGCCGACATG 59.670 52.381 0.00 0.00 0.00 3.21
8642 10339 0.248377 GAAGATGCAAGCCGACATGC 60.248 55.000 0.00 0.00 40.89 4.06
8643 10340 0.679002 AAGATGCAAGCCGACATGCT 60.679 50.000 0.00 0.00 45.43 3.79
8644 10341 1.094073 AGATGCAAGCCGACATGCTC 61.094 55.000 0.00 0.00 41.80 4.26
8645 10342 1.371337 GATGCAAGCCGACATGCTCA 61.371 55.000 0.00 0.00 41.80 4.26
8646 10343 0.961857 ATGCAAGCCGACATGCTCAA 60.962 50.000 0.00 0.00 41.80 3.02
8647 10344 1.136147 GCAAGCCGACATGCTCAAG 59.864 57.895 0.00 0.00 41.80 3.02
8648 10345 1.580845 GCAAGCCGACATGCTCAAGT 61.581 55.000 0.00 0.00 41.80 3.16
8649 10346 0.877071 CAAGCCGACATGCTCAAGTT 59.123 50.000 0.00 0.00 41.80 2.66
8650 10347 1.135859 CAAGCCGACATGCTCAAGTTC 60.136 52.381 0.00 0.00 41.80 3.01
8651 10348 1.016130 AGCCGACATGCTCAAGTTCG 61.016 55.000 0.00 0.00 36.75 3.95
8652 10349 1.014044 GCCGACATGCTCAAGTTCGA 61.014 55.000 0.00 0.00 0.00 3.71
8653 10350 0.716108 CCGACATGCTCAAGTTCGAC 59.284 55.000 0.00 0.00 0.00 4.20
8654 10351 0.363512 CGACATGCTCAAGTTCGACG 59.636 55.000 0.00 0.00 0.00 5.12
8655 10352 1.698165 GACATGCTCAAGTTCGACGA 58.302 50.000 0.00 0.00 0.00 4.20
8656 10353 1.387084 GACATGCTCAAGTTCGACGAC 59.613 52.381 0.00 0.00 0.00 4.34
8657 10354 0.363512 CATGCTCAAGTTCGACGACG 59.636 55.000 0.00 0.00 41.26 5.12
8669 10366 1.865340 TCGACGACGAGTGATCTATGG 59.135 52.381 5.75 0.00 43.81 2.74
8670 10367 1.660614 CGACGACGAGTGATCTATGGC 60.661 57.143 0.00 0.00 42.66 4.40
8671 10368 0.308068 ACGACGAGTGATCTATGGCG 59.692 55.000 0.00 0.00 36.92 5.69
8672 10369 0.386100 CGACGAGTGATCTATGGCGG 60.386 60.000 0.00 0.00 30.29 6.13
8673 10370 0.669077 GACGAGTGATCTATGGCGGT 59.331 55.000 0.00 0.00 0.00 5.68
8674 10371 1.878088 GACGAGTGATCTATGGCGGTA 59.122 52.381 0.00 0.00 0.00 4.02
8675 10372 2.292569 GACGAGTGATCTATGGCGGTAA 59.707 50.000 0.00 0.00 0.00 2.85
8676 10373 2.293677 ACGAGTGATCTATGGCGGTAAG 59.706 50.000 0.00 0.00 0.00 2.34
8686 10383 3.497879 GCGGTAAGCGCCATCTTT 58.502 55.556 2.29 0.00 35.41 2.52
8687 10384 1.800681 GCGGTAAGCGCCATCTTTT 59.199 52.632 2.29 0.00 35.41 2.27
8688 10385 0.170339 GCGGTAAGCGCCATCTTTTT 59.830 50.000 2.29 0.00 35.41 1.94
8705 10402 1.993956 TTTTGTATGCTGGCAGGTGT 58.006 45.000 17.64 0.00 0.00 4.16
8706 10403 1.246649 TTTGTATGCTGGCAGGTGTG 58.753 50.000 17.64 0.00 0.00 3.82
8707 10404 0.110295 TTGTATGCTGGCAGGTGTGT 59.890 50.000 17.64 0.00 0.00 3.72
8708 10405 0.110295 TGTATGCTGGCAGGTGTGTT 59.890 50.000 17.64 0.00 0.00 3.32
8709 10406 0.523072 GTATGCTGGCAGGTGTGTTG 59.477 55.000 17.64 0.00 0.00 3.33
8710 10407 0.399833 TATGCTGGCAGGTGTGTTGA 59.600 50.000 17.64 0.00 0.00 3.18
8711 10408 1.174712 ATGCTGGCAGGTGTGTTGAC 61.175 55.000 17.64 0.00 0.00 3.18
8712 10409 1.823470 GCTGGCAGGTGTGTTGACA 60.823 57.895 17.64 0.00 31.50 3.58
8713 10410 1.174712 GCTGGCAGGTGTGTTGACAT 61.175 55.000 17.64 0.00 32.07 3.06
8714 10411 0.594602 CTGGCAGGTGTGTTGACATG 59.405 55.000 6.61 0.00 32.07 3.21
8715 10412 0.182299 TGGCAGGTGTGTTGACATGA 59.818 50.000 0.00 0.00 33.63 3.07
8716 10413 0.593128 GGCAGGTGTGTTGACATGAC 59.407 55.000 0.00 0.00 33.63 3.06
8717 10414 0.593128 GCAGGTGTGTTGACATGACC 59.407 55.000 0.00 7.03 33.63 4.02
8718 10415 1.965935 CAGGTGTGTTGACATGACCA 58.034 50.000 0.00 0.00 35.09 4.02
8719 10416 1.603802 CAGGTGTGTTGACATGACCAC 59.396 52.381 0.00 0.00 35.09 4.16
8720 10417 0.586319 GGTGTGTTGACATGACCACG 59.414 55.000 0.00 0.00 33.63 4.94
8721 10418 0.586319 GTGTGTTGACATGACCACGG 59.414 55.000 0.00 0.00 33.63 4.94
8722 10419 0.533978 TGTGTTGACATGACCACGGG 60.534 55.000 0.00 0.00 0.00 5.28
8723 10420 0.250124 GTGTTGACATGACCACGGGA 60.250 55.000 0.00 0.00 0.00 5.14
8724 10421 0.034756 TGTTGACATGACCACGGGAG 59.965 55.000 0.00 0.00 0.00 4.30
8725 10422 1.003839 TTGACATGACCACGGGAGC 60.004 57.895 0.00 0.00 0.00 4.70
8726 10423 2.125106 GACATGACCACGGGAGCC 60.125 66.667 0.00 0.00 0.00 4.70
8742 10439 4.429212 CCGTGATGGCGTGGTCGA 62.429 66.667 0.00 0.00 39.71 4.20
8743 10440 2.431771 CGTGATGGCGTGGTCGAA 60.432 61.111 0.00 0.00 39.71 3.71
8744 10441 2.726691 CGTGATGGCGTGGTCGAAC 61.727 63.158 0.00 0.00 39.71 3.95
8745 10442 1.374252 GTGATGGCGTGGTCGAACT 60.374 57.895 0.33 0.00 39.71 3.01
8746 10443 1.080093 TGATGGCGTGGTCGAACTC 60.080 57.895 0.33 0.00 39.71 3.01
8747 10444 1.080093 GATGGCGTGGTCGAACTCA 60.080 57.895 0.33 0.00 39.71 3.41
8748 10445 0.669318 GATGGCGTGGTCGAACTCAA 60.669 55.000 0.33 0.00 39.71 3.02
8749 10446 0.670546 ATGGCGTGGTCGAACTCAAG 60.671 55.000 0.33 0.00 39.71 3.02
8750 10447 1.300697 GGCGTGGTCGAACTCAAGT 60.301 57.895 0.33 0.00 39.71 3.16
8751 10448 1.282930 GGCGTGGTCGAACTCAAGTC 61.283 60.000 0.33 0.00 39.71 3.01
8752 10449 0.318784 GCGTGGTCGAACTCAAGTCT 60.319 55.000 0.33 0.00 39.71 3.24
8753 10450 1.687628 CGTGGTCGAACTCAAGTCTC 58.312 55.000 0.33 0.00 39.71 3.36
8754 10451 1.001706 CGTGGTCGAACTCAAGTCTCA 60.002 52.381 0.33 0.00 39.71 3.27
8755 10452 2.351835 CGTGGTCGAACTCAAGTCTCAT 60.352 50.000 0.33 0.00 39.71 2.90
8756 10453 3.246619 GTGGTCGAACTCAAGTCTCATC 58.753 50.000 0.33 0.00 0.00 2.92
8757 10454 2.231478 TGGTCGAACTCAAGTCTCATCC 59.769 50.000 0.33 0.00 0.00 3.51
8758 10455 2.494073 GGTCGAACTCAAGTCTCATCCT 59.506 50.000 0.00 0.00 0.00 3.24
8759 10456 3.056465 GGTCGAACTCAAGTCTCATCCTT 60.056 47.826 0.00 0.00 0.00 3.36
8760 10457 4.561105 GTCGAACTCAAGTCTCATCCTTT 58.439 43.478 0.00 0.00 0.00 3.11
8761 10458 4.991687 GTCGAACTCAAGTCTCATCCTTTT 59.008 41.667 0.00 0.00 0.00 2.27
8762 10459 5.467063 GTCGAACTCAAGTCTCATCCTTTTT 59.533 40.000 0.00 0.00 0.00 1.94
8806 10503 1.937278 TTTTTGTGCTGGCATGTGTG 58.063 45.000 0.00 0.00 0.00 3.82
8842 10539 1.717937 GCGCTAGCATGAACTGTGG 59.282 57.895 16.45 0.00 44.35 4.17
8843 10540 1.021390 GCGCTAGCATGAACTGTGGT 61.021 55.000 16.45 0.00 44.35 4.16
8844 10541 0.723414 CGCTAGCATGAACTGTGGTG 59.277 55.000 16.45 0.00 0.00 4.17
8845 10542 1.672737 CGCTAGCATGAACTGTGGTGA 60.673 52.381 16.45 0.00 0.00 4.02
8846 10543 2.636830 GCTAGCATGAACTGTGGTGAT 58.363 47.619 10.63 0.00 0.00 3.06
8847 10544 3.737972 CGCTAGCATGAACTGTGGTGATA 60.738 47.826 16.45 0.00 0.00 2.15
8848 10545 4.384056 GCTAGCATGAACTGTGGTGATAT 58.616 43.478 10.63 0.00 0.00 1.63
8849 10546 4.818546 GCTAGCATGAACTGTGGTGATATT 59.181 41.667 10.63 0.00 0.00 1.28
8850 10547 5.297776 GCTAGCATGAACTGTGGTGATATTT 59.702 40.000 10.63 0.00 0.00 1.40
8851 10548 6.183360 GCTAGCATGAACTGTGGTGATATTTT 60.183 38.462 10.63 0.00 0.00 1.82
8852 10549 6.594788 AGCATGAACTGTGGTGATATTTTT 57.405 33.333 0.00 0.00 0.00 1.94
8880 10577 1.729276 CATTGTATGCCGGTGCTGG 59.271 57.895 1.90 0.00 38.71 4.85
8897 10594 3.896133 GCATGGTGCCGGCATGAG 61.896 66.667 35.23 22.88 37.42 2.90
8898 10595 2.124612 CATGGTGCCGGCATGAGA 60.125 61.111 35.23 17.09 0.00 3.27
8899 10596 2.124570 ATGGTGCCGGCATGAGAC 60.125 61.111 35.23 19.50 0.00 3.36
8900 10597 2.970379 ATGGTGCCGGCATGAGACA 61.970 57.895 35.23 24.88 0.00 3.41
8901 10598 2.124570 GGTGCCGGCATGAGACAT 60.125 61.111 35.23 0.00 0.00 3.06
8902 10599 2.475466 GGTGCCGGCATGAGACATG 61.475 63.158 35.23 7.29 0.00 3.21
8903 10600 2.124612 TGCCGGCATGAGACATGG 60.125 61.111 29.03 0.00 0.00 3.66
8904 10601 3.589881 GCCGGCATGAGACATGGC 61.590 66.667 24.80 22.27 40.66 4.40
8905 10602 2.903855 CCGGCATGAGACATGGCC 60.904 66.667 24.71 17.98 40.95 5.36
8907 10604 3.589881 GGCATGAGACATGGCCGC 61.590 66.667 21.83 5.42 38.48 6.53
8908 10605 2.515523 GCATGAGACATGGCCGCT 60.516 61.111 12.56 0.00 0.00 5.52
8909 10606 2.831366 GCATGAGACATGGCCGCTG 61.831 63.158 12.56 0.00 0.00 5.18
8910 10607 2.184830 CATGAGACATGGCCGCTGG 61.185 63.158 9.69 0.00 0.00 4.85
8921 10618 2.202919 CCGCTGGCATGATCGTCA 60.203 61.111 0.00 0.00 0.00 4.35
8922 10619 2.242572 CCGCTGGCATGATCGTCAG 61.243 63.158 0.00 0.00 41.70 3.51
8923 10620 1.520120 CGCTGGCATGATCGTCAGT 60.520 57.895 0.00 0.00 40.84 3.41
8924 10621 1.759293 CGCTGGCATGATCGTCAGTG 61.759 60.000 0.00 3.29 42.16 3.66
8925 10622 1.434622 GCTGGCATGATCGTCAGTGG 61.435 60.000 0.00 0.00 40.84 4.00
8926 10623 0.812811 CTGGCATGATCGTCAGTGGG 60.813 60.000 0.00 0.00 33.82 4.61
8927 10624 1.221840 GGCATGATCGTCAGTGGGT 59.778 57.895 0.00 0.00 0.00 4.51
8928 10625 0.811616 GGCATGATCGTCAGTGGGTC 60.812 60.000 0.00 0.00 0.00 4.46
8929 10626 0.176680 GCATGATCGTCAGTGGGTCT 59.823 55.000 0.00 0.00 0.00 3.85
8930 10627 1.406069 GCATGATCGTCAGTGGGTCTT 60.406 52.381 0.00 0.00 0.00 3.01
8931 10628 2.936993 GCATGATCGTCAGTGGGTCTTT 60.937 50.000 0.00 0.00 0.00 2.52
8932 10629 3.338249 CATGATCGTCAGTGGGTCTTTT 58.662 45.455 0.00 0.00 0.00 2.27
8933 10630 3.485463 TGATCGTCAGTGGGTCTTTTT 57.515 42.857 0.00 0.00 0.00 1.94
8976 10673 4.603985 CATGAAATGGATCGATGTGTTGG 58.396 43.478 0.54 0.00 41.79 3.77
8977 10674 3.016031 TGAAATGGATCGATGTGTTGGG 58.984 45.455 0.54 0.00 0.00 4.12
8978 10675 1.392589 AATGGATCGATGTGTTGGGC 58.607 50.000 0.54 0.00 0.00 5.36
8979 10676 0.815213 ATGGATCGATGTGTTGGGCG 60.815 55.000 0.54 0.00 0.00 6.13
8980 10677 2.709475 GATCGATGTGTTGGGCGC 59.291 61.111 0.54 0.00 0.00 6.53
8981 10678 2.046411 ATCGATGTGTTGGGCGCA 60.046 55.556 10.83 0.00 42.33 6.09
8982 10679 2.309764 GATCGATGTGTTGGGCGCAC 62.310 60.000 10.83 6.04 40.78 5.34
8983 10680 2.803155 ATCGATGTGTTGGGCGCACT 62.803 55.000 12.74 0.00 40.78 4.40
8984 10681 2.562912 GATGTGTTGGGCGCACTG 59.437 61.111 12.74 0.00 40.78 3.66
8985 10682 3.615536 GATGTGTTGGGCGCACTGC 62.616 63.158 12.74 3.80 40.78 4.40
8994 10691 3.430862 GCGCACTGCCGATCCAAA 61.431 61.111 0.30 0.00 37.76 3.28
8995 10692 2.764314 GCGCACTGCCGATCCAAAT 61.764 57.895 0.30 0.00 37.76 2.32
8996 10693 1.063006 CGCACTGCCGATCCAAATG 59.937 57.895 0.00 0.00 0.00 2.32
8997 10694 1.226773 GCACTGCCGATCCAAATGC 60.227 57.895 0.00 0.00 0.00 3.56
8998 10695 1.936436 GCACTGCCGATCCAAATGCA 61.936 55.000 0.00 0.00 30.96 3.96
8999 10696 0.527113 CACTGCCGATCCAAATGCAA 59.473 50.000 0.00 0.00 32.58 4.08
9000 10697 1.067706 CACTGCCGATCCAAATGCAAA 60.068 47.619 0.00 0.00 32.58 3.68
9001 10698 1.617850 ACTGCCGATCCAAATGCAAAA 59.382 42.857 0.00 0.00 32.58 2.44
9002 10699 1.994779 CTGCCGATCCAAATGCAAAAC 59.005 47.619 0.00 0.00 32.58 2.43
9003 10700 1.617850 TGCCGATCCAAATGCAAAACT 59.382 42.857 0.00 0.00 0.00 2.66
9004 10701 1.994779 GCCGATCCAAATGCAAAACTG 59.005 47.619 0.00 0.00 0.00 3.16
9005 10702 2.352617 GCCGATCCAAATGCAAAACTGA 60.353 45.455 0.00 0.00 0.00 3.41
9006 10703 3.860378 GCCGATCCAAATGCAAAACTGAA 60.860 43.478 0.00 0.00 0.00 3.02
9007 10704 3.674753 CCGATCCAAATGCAAAACTGAAC 59.325 43.478 0.00 0.00 0.00 3.18
9008 10705 3.361644 CGATCCAAATGCAAAACTGAACG 59.638 43.478 0.00 0.00 0.00 3.95
9009 10706 3.090952 TCCAAATGCAAAACTGAACGG 57.909 42.857 0.00 0.00 0.00 4.44
9010 10707 2.690497 TCCAAATGCAAAACTGAACGGA 59.310 40.909 0.00 0.00 0.00 4.69
9011 10708 2.794350 CCAAATGCAAAACTGAACGGAC 59.206 45.455 0.00 0.00 0.00 4.79
9012 10709 2.399396 AATGCAAAACTGAACGGACG 57.601 45.000 0.00 0.00 0.00 4.79
9013 10710 0.040425 ATGCAAAACTGAACGGACGC 60.040 50.000 0.00 0.00 0.00 5.19
9014 10711 1.370051 GCAAAACTGAACGGACGCC 60.370 57.895 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 34 2.036346 GCTCCATATTTTCCATGTGCCC 59.964 50.000 0.00 0.00 0.00 5.36
207 213 2.231215 AGCATACTTCCATGAGACGC 57.769 50.000 0.00 0.00 0.00 5.19
214 220 2.158957 CGGTGGTGTAGCATACTTCCAT 60.159 50.000 7.35 0.00 43.54 3.41
254 261 3.702555 GTCACTGCCGCACGACAC 61.703 66.667 11.62 0.00 0.00 3.67
277 284 6.238731 GGTGTTTTTGTACCTGGTACCTAAAC 60.239 42.308 31.71 31.71 39.23 2.01
281 288 3.202595 TGGTGTTTTTGTACCTGGTACCT 59.797 43.478 29.04 0.00 38.14 3.08
291 298 1.932511 GTCGTCCGTGGTGTTTTTGTA 59.067 47.619 0.00 0.00 0.00 2.41
295 302 0.391395 TGTGTCGTCCGTGGTGTTTT 60.391 50.000 0.00 0.00 0.00 2.43
297 304 1.519898 GTGTGTCGTCCGTGGTGTT 60.520 57.895 0.00 0.00 0.00 3.32
303 310 0.179129 AGTTTTCGTGTGTCGTCCGT 60.179 50.000 0.00 0.00 40.80 4.69
308 315 4.509915 AAACTGTAGTTTTCGTGTGTCG 57.490 40.909 4.25 0.00 45.07 4.35
340 347 4.834496 ACCTTCATTGATGCCTTCTTGAAA 59.166 37.500 0.00 0.00 31.35 2.69
341 348 4.410099 ACCTTCATTGATGCCTTCTTGAA 58.590 39.130 0.00 0.00 0.00 2.69
342 349 4.038271 ACCTTCATTGATGCCTTCTTGA 57.962 40.909 0.00 0.00 0.00 3.02
343 350 4.491676 CAACCTTCATTGATGCCTTCTTG 58.508 43.478 0.00 0.00 0.00 3.02
344 351 3.056322 GCAACCTTCATTGATGCCTTCTT 60.056 43.478 0.00 0.00 0.00 2.52
398 405 5.340439 AGGAGTAGTACATTAGTTGTGCC 57.660 43.478 2.52 0.00 41.44 5.01
421 428 8.748412 TGCTTGGTTTTGCATTTACTATCTTAT 58.252 29.630 0.00 0.00 33.94 1.73
434 441 2.954989 TGATGTAGTGCTTGGTTTTGCA 59.045 40.909 0.00 0.00 36.79 4.08
442 449 1.995484 CTCCACGTGATGTAGTGCTTG 59.005 52.381 19.30 0.00 37.07 4.01
444 451 1.545841 TCTCCACGTGATGTAGTGCT 58.454 50.000 19.30 0.00 37.07 4.40
504 512 2.362632 AGCCGGCTACCTCTTCGT 60.363 61.111 31.86 0.00 0.00 3.85
514 522 4.421479 CGTGTCGAAGAGCCGGCT 62.421 66.667 33.48 33.48 36.95 5.52
518 526 1.796749 GACGTCGTGTCGAAGAGCC 60.797 63.158 0.63 0.00 37.53 4.70
528 536 1.269166 GACATGGCTTAGACGTCGTG 58.731 55.000 10.46 5.55 0.00 4.35
534 542 1.281899 GCACTCGACATGGCTTAGAC 58.718 55.000 0.00 0.00 0.00 2.59
542 550 0.098200 CAGCAATGGCACTCGACATG 59.902 55.000 0.00 0.00 41.33 3.21
566 574 1.611491 GTAGAGGAGGAAGAGCATCGG 59.389 57.143 0.00 0.00 42.67 4.18
599 608 2.938956 AGGAATATTCTTGCCGAGGG 57.061 50.000 14.95 0.00 0.00 4.30
600 609 4.260784 CGAAAAGGAATATTCTTGCCGAGG 60.261 45.833 14.95 0.00 0.00 4.63
602 611 4.509616 TCGAAAAGGAATATTCTTGCCGA 58.490 39.130 14.95 13.22 31.54 5.54
604 613 6.436843 TCTTCGAAAAGGAATATTCTTGCC 57.563 37.500 14.95 0.00 33.03 4.52
605 614 8.742554 TTTTCTTCGAAAAGGAATATTCTTGC 57.257 30.769 14.95 0.86 29.91 4.01
610 621 9.783256 CGGTAATTTTCTTCGAAAAGGAATATT 57.217 29.630 14.24 14.24 29.91 1.28
680 2215 1.744741 GCCTGCTGTCTCTCTTGCC 60.745 63.158 0.00 0.00 0.00 4.52
681 2216 2.099431 CGCCTGCTGTCTCTCTTGC 61.099 63.158 0.00 0.00 0.00 4.01
682 2217 0.458197 CTCGCCTGCTGTCTCTCTTG 60.458 60.000 0.00 0.00 0.00 3.02
778 2324 4.944372 ATCGAATCGGACCGCGCC 62.944 66.667 9.66 0.00 0.00 6.53
779 2325 3.395687 GATCGAATCGGACCGCGC 61.396 66.667 9.66 0.00 0.00 6.86
780 2326 1.726322 GAGATCGAATCGGACCGCG 60.726 63.158 9.66 7.59 0.00 6.46
781 2327 1.371881 GGAGATCGAATCGGACCGC 60.372 63.158 9.66 0.00 0.00 5.68
782 2328 1.082038 CGGAGATCGAATCGGACCG 60.082 63.158 7.84 7.84 42.43 4.79
783 2329 1.286260 CCGGAGATCGAATCGGACC 59.714 63.158 1.76 0.88 44.69 4.46
784 2330 0.040246 GACCGGAGATCGAATCGGAC 60.040 60.000 9.46 13.21 44.69 4.79
785 2331 0.464916 TGACCGGAGATCGAATCGGA 60.465 55.000 9.46 2.54 44.69 4.55
786 2332 0.384309 TTGACCGGAGATCGAATCGG 59.616 55.000 9.46 14.50 46.95 4.18
787 2333 1.065701 ACTTGACCGGAGATCGAATCG 59.934 52.381 9.46 0.00 42.43 3.34
788 2334 2.099263 TCACTTGACCGGAGATCGAATC 59.901 50.000 9.46 0.00 42.43 2.52
799 2345 3.794690 ACGATGAGTCACTTGACCG 57.205 52.632 5.73 5.18 45.85 4.79
909 2455 7.186570 AGGAAATCGATTTGGATTTGGATTT 57.813 32.000 27.27 0.00 44.41 2.17
910 2456 6.183360 GGAGGAAATCGATTTGGATTTGGATT 60.183 38.462 27.27 0.00 44.41 3.01
911 2457 5.302823 GGAGGAAATCGATTTGGATTTGGAT 59.697 40.000 27.27 0.00 44.41 3.41
912 2458 4.644685 GGAGGAAATCGATTTGGATTTGGA 59.355 41.667 27.27 0.00 44.41 3.53
913 2459 4.202151 GGGAGGAAATCGATTTGGATTTGG 60.202 45.833 27.27 0.00 44.41 3.28
914 2460 4.202151 GGGGAGGAAATCGATTTGGATTTG 60.202 45.833 27.27 0.00 44.41 2.32
968 2514 4.547367 GAGGGGATTCGGCGGTGG 62.547 72.222 7.21 0.00 0.00 4.61
993 2539 4.529731 GAGGAGGGCATTGGGGGC 62.530 72.222 0.00 0.00 0.00 5.80
994 2540 3.825623 GGAGGAGGGCATTGGGGG 61.826 72.222 0.00 0.00 0.00 5.40
1121 2667 3.118482 GCTAGGTAGGGTTAGGGTTTGTC 60.118 52.174 0.00 0.00 0.00 3.18
1135 2681 0.961358 CGGATCGGAGGGCTAGGTAG 60.961 65.000 0.00 0.00 0.00 3.18
1136 2682 1.074423 CGGATCGGAGGGCTAGGTA 59.926 63.158 0.00 0.00 0.00 3.08
1137 2683 2.203509 CGGATCGGAGGGCTAGGT 60.204 66.667 0.00 0.00 0.00 3.08
1138 2684 1.974343 CTCGGATCGGAGGGCTAGG 60.974 68.421 19.79 0.00 0.00 3.02
1179 2725 2.584418 CAGCGATGCCGTCAGAGG 60.584 66.667 0.00 0.00 38.24 3.69
1457 3003 1.090728 GTAGAGGCAGAGGCTTTTGC 58.909 55.000 14.38 14.38 46.64 3.68
1529 3077 6.092396 GCATGATCAGAATCTAGGCATTACAG 59.908 42.308 0.09 0.00 32.75 2.74
1559 3109 0.822811 TGCCTACGTAATAACCCGCA 59.177 50.000 0.00 0.00 0.00 5.69
1578 3128 4.402155 CCAACACTAATACCATGCACCATT 59.598 41.667 0.00 0.00 0.00 3.16
1582 3132 4.881273 TGATCCAACACTAATACCATGCAC 59.119 41.667 0.00 0.00 0.00 4.57
1597 3147 4.463891 ACCAACCATCAGATTTGATCCAAC 59.536 41.667 0.00 0.00 42.12 3.77
1644 3194 2.156343 TACACCGCGCAATGCATATA 57.844 45.000 8.75 0.00 46.97 0.86
1645 3195 1.522668 ATACACCGCGCAATGCATAT 58.477 45.000 8.75 0.00 46.97 1.78
1658 3208 5.108517 CCAAACCACATGCATTAATACACC 58.891 41.667 0.00 0.00 0.00 4.16
1661 3211 5.960113 TGACCAAACCACATGCATTAATAC 58.040 37.500 0.00 0.00 0.00 1.89
1662 3212 6.596309 TTGACCAAACCACATGCATTAATA 57.404 33.333 0.00 0.00 0.00 0.98
1698 3248 5.220710 AGGGTGATTCCAATCTAGATTCG 57.779 43.478 15.24 9.35 38.11 3.34
1701 3251 4.414846 AGCAAGGGTGATTCCAATCTAGAT 59.585 41.667 0.00 0.00 38.11 1.98
1729 3279 0.844660 CCTAACTCCCTTTAGCCCCC 59.155 60.000 0.00 0.00 0.00 5.40
1748 3298 0.251165 TAGGGCACAAGCTTGGTTCC 60.251 55.000 29.18 23.82 41.70 3.62
1772 3323 2.093128 AGACTACCGGTGCCATTTTAGG 60.093 50.000 19.93 0.00 0.00 2.69
1894 3446 3.678072 ACAAGACGACACGACAATATTGG 59.322 43.478 19.37 5.37 0.00 3.16
1896 3448 3.122948 GCACAAGACGACACGACAATATT 59.877 43.478 0.00 0.00 0.00 1.28
1904 3456 1.272715 GTGTGCACAAGACGACACG 59.727 57.895 23.59 0.00 35.79 4.49
1979 3531 1.299541 CGTCCAACTGCACACTTTCT 58.700 50.000 0.00 0.00 0.00 2.52
1980 3532 1.014352 ACGTCCAACTGCACACTTTC 58.986 50.000 0.00 0.00 0.00 2.62
1998 3551 8.905103 ATAAACCTTTCATGTAACGCAAATAC 57.095 30.769 0.00 0.00 0.00 1.89
2032 3585 4.526650 TCCATCACTGACAGTTAGTAAGCA 59.473 41.667 5.04 0.00 31.09 3.91
2194 3755 3.186119 GAGACAGAGCATCAACAGTAGC 58.814 50.000 0.00 0.00 37.82 3.58
2218 3779 7.272978 TCCTACAAAACTATTCTAGACATGCC 58.727 38.462 0.00 0.00 0.00 4.40
2266 3828 8.873215 ATGAAACGACAAACCATATAGTAGAG 57.127 34.615 0.00 0.00 0.00 2.43
2381 3943 7.763985 ACTCAAGAAAAATTGGGTTTGTAACTG 59.236 33.333 0.00 0.00 41.10 3.16
2456 4018 5.505173 ACTTGCTGCATGGTATAATGAAC 57.495 39.130 18.21 0.00 0.00 3.18
2464 4026 2.426522 GTCTGAACTTGCTGCATGGTA 58.573 47.619 18.21 4.90 0.00 3.25
2536 4098 3.482156 AATCTCACTTCCCATCCATCG 57.518 47.619 0.00 0.00 0.00 3.84
2790 4352 8.724310 ACCAAAACTCTAAGCATTATAGGGTAT 58.276 33.333 0.00 0.00 32.94 2.73
2793 4355 7.012421 GTGACCAAAACTCTAAGCATTATAGGG 59.988 40.741 0.00 0.00 29.87 3.53
2813 4375 2.611971 GCATTTGTACCTCGAGTGACCA 60.612 50.000 12.31 0.00 0.00 4.02
2880 4442 0.622665 ACAAGGAGGGGAAGCAGATG 59.377 55.000 0.00 0.00 0.00 2.90
2956 4518 9.506018 TCTTATGAACTGAAGTGAAATTCATGA 57.494 29.630 0.00 0.00 39.65 3.07
3424 5005 4.331968 ACGATGTTGCAGGAGGAAATAAA 58.668 39.130 0.00 0.00 0.00 1.40
3462 5043 0.396556 TATAGCGTCCCAGTGCTCCA 60.397 55.000 0.00 0.00 42.48 3.86
3553 5134 1.396996 GTTACTTGCTACCCATGTGCG 59.603 52.381 0.00 0.00 34.15 5.34
3674 5261 6.866248 CCGAATTTAGTTGCAAATAAACAGGT 59.134 34.615 28.41 16.68 0.00 4.00
3731 5318 4.445452 AAACATGCTCATAACTTGCCAG 57.555 40.909 0.00 0.00 0.00 4.85
3732 5319 4.142403 GCTAAACATGCTCATAACTTGCCA 60.142 41.667 0.00 0.00 0.00 4.92
3733 5320 4.142403 TGCTAAACATGCTCATAACTTGCC 60.142 41.667 0.00 0.00 0.00 4.52
3734 5321 4.985413 TGCTAAACATGCTCATAACTTGC 58.015 39.130 0.00 0.00 0.00 4.01
3735 5322 7.031372 ACAATGCTAAACATGCTCATAACTTG 58.969 34.615 0.00 0.00 39.60 3.16
3736 5323 7.161773 ACAATGCTAAACATGCTCATAACTT 57.838 32.000 0.00 0.00 39.60 2.66
3743 5330 9.778993 CCAATATATACAATGCTAAACATGCTC 57.221 33.333 0.00 0.00 39.60 4.26
3883 5472 7.015877 ACCTGGTGTATACTTTGTTTAGTCAGA 59.984 37.037 0.00 0.00 0.00 3.27
3977 5566 1.821216 TTCCCTCCGTCTCAAAATGC 58.179 50.000 0.00 0.00 0.00 3.56
4008 5597 6.708949 TCAGAACTTAACCGCTGTTAGATTTT 59.291 34.615 0.89 0.00 38.17 1.82
4496 6086 2.010145 TTGTCTAGATGAGCAACGGC 57.990 50.000 0.00 0.00 41.61 5.68
4691 6281 6.489700 TGCTAAAAACATCCATGTCTTTCAGA 59.510 34.615 0.00 0.00 40.80 3.27
4692 6282 6.680810 TGCTAAAAACATCCATGTCTTTCAG 58.319 36.000 0.00 0.00 40.80 3.02
4693 6283 6.647334 TGCTAAAAACATCCATGTCTTTCA 57.353 33.333 0.00 0.00 40.80 2.69
4694 6284 6.532657 CCATGCTAAAAACATCCATGTCTTTC 59.467 38.462 0.00 0.00 40.80 2.62
4697 6287 5.018809 ACCATGCTAAAAACATCCATGTCT 58.981 37.500 0.00 0.00 40.80 3.41
4698 6288 5.329035 ACCATGCTAAAAACATCCATGTC 57.671 39.130 0.00 0.00 40.80 3.06
4699 6289 5.481105 CAACCATGCTAAAAACATCCATGT 58.519 37.500 0.00 0.00 44.20 3.21
4700 6290 4.871557 CCAACCATGCTAAAAACATCCATG 59.128 41.667 0.00 0.00 34.55 3.66
4701 6291 4.623647 GCCAACCATGCTAAAAACATCCAT 60.624 41.667 0.00 0.00 0.00 3.41
4702 6292 3.306641 GCCAACCATGCTAAAAACATCCA 60.307 43.478 0.00 0.00 0.00 3.41
4703 6293 3.261580 GCCAACCATGCTAAAAACATCC 58.738 45.455 0.00 0.00 0.00 3.51
4806 6396 9.503427 GTAAATTATCAACAGGATTAACACAGC 57.497 33.333 0.00 0.00 37.44 4.40
5138 6777 2.203480 GAAGTGTTGCCTGGCCCA 60.203 61.111 17.53 10.21 0.00 5.36
5235 6874 8.698973 TGGGAAGTGTGAAAATAATACAAAGA 57.301 30.769 0.00 0.00 0.00 2.52
5357 6996 4.578105 GCAAGAAGCTCCTACAAATAGCAT 59.422 41.667 0.00 0.00 41.15 3.79
5477 7116 0.909133 TGCCCCAGTACTCATCTGCA 60.909 55.000 0.00 0.00 0.00 4.41
5480 7119 0.912486 GGTTGCCCCAGTACTCATCT 59.088 55.000 0.00 0.00 0.00 2.90
5603 7242 6.512342 TCAGTTAAGAGTAGTGGCTACTTC 57.488 41.667 8.46 2.82 45.90 3.01
5629 7268 5.102953 TCATCCACAGGAAATAGAAGGTG 57.897 43.478 0.00 0.00 34.34 4.00
5631 7270 5.365021 ACTCATCCACAGGAAATAGAAGG 57.635 43.478 0.00 0.00 34.34 3.46
5925 7598 1.614996 TGTGCCGGTTTGATCACAAT 58.385 45.000 1.90 0.00 36.62 2.71
5927 7600 1.164411 GATGTGCCGGTTTGATCACA 58.836 50.000 11.90 11.90 42.66 3.58
5938 7611 2.595124 TAGTGTGTATGGATGTGCCG 57.405 50.000 0.00 0.00 40.66 5.69
5996 7669 7.628366 GCATACAAGTTAAAGCAGCCAGAATAA 60.628 37.037 0.00 0.00 0.00 1.40
5997 7670 6.183360 GCATACAAGTTAAAGCAGCCAGAATA 60.183 38.462 0.00 0.00 0.00 1.75
6074 7747 1.831736 AGTGGGCAAACTAGCGTAGAT 59.168 47.619 0.00 0.00 34.64 1.98
6107 7780 1.799544 ACGGGTCAAACGTTATGGAC 58.200 50.000 15.41 15.41 42.70 4.02
6163 7836 3.314553 ACTGTTACGGTCATTGTTCTCG 58.685 45.455 0.00 0.00 0.00 4.04
6309 7982 4.901197 TGAGTAATACCTCAGCAACCAA 57.099 40.909 0.00 0.00 36.57 3.67
6327 8000 4.758674 ACAAGAATGATATGCGGGAATGAG 59.241 41.667 0.00 0.00 0.00 2.90
6353 8028 5.605069 TGCAGGGGATATGTAGTAGCTTTTA 59.395 40.000 0.00 0.00 0.00 1.52
6577 8252 1.135972 GCCAGCACAACATAACAGACG 60.136 52.381 0.00 0.00 0.00 4.18
6596 8271 4.998788 AGAAAAACTGAGTCCAACTTTGC 58.001 39.130 0.00 0.00 0.00 3.68
6680 8356 7.577979 CGTAAGAAGGCTCTATCTGTACTTAG 58.422 42.308 0.00 0.00 43.02 2.18
6715 8394 4.431378 TGGAGGACCTGTACATAAAAGGA 58.569 43.478 0.00 0.00 37.04 3.36
6799 8478 2.080693 GTACGCCCATCAATTGTGTCA 58.919 47.619 5.13 0.00 0.00 3.58
6885 8564 6.040209 TGCTTTTGCCAGTTATTTGATCAT 57.960 33.333 0.00 0.00 46.87 2.45
6913 8592 4.385748 TCGATGTCTGAAGTTTCATTCACG 59.614 41.667 0.00 0.00 36.46 4.35
7101 8780 1.601903 TCACAGACACAATCAAACGCC 59.398 47.619 0.00 0.00 0.00 5.68
7135 8814 3.073274 AGGTTGTATTGCTTGAGACCC 57.927 47.619 0.00 0.00 0.00 4.46
7373 9052 4.762251 GTGCTTCTATGTTTTTCCTCCAGT 59.238 41.667 0.00 0.00 0.00 4.00
7396 9075 8.619146 ATGAAATAAACATGAATACTTGTGCG 57.381 30.769 0.00 0.00 35.19 5.34
7726 9405 5.239306 CAGAGAATAACAAACAAGGTCAGCA 59.761 40.000 0.00 0.00 0.00 4.41
7733 9412 4.556135 CGCATGCAGAGAATAACAAACAAG 59.444 41.667 19.57 0.00 0.00 3.16
7991 9684 4.836825 ACTCCTGATGTTGTACAATCAGG 58.163 43.478 33.78 33.78 45.17 3.86
8029 9722 0.036952 ATGTCCAGGCTCACAAGTCG 60.037 55.000 0.09 0.00 30.24 4.18
8077 9770 1.586154 GACAGCACAATTGTCCCCCG 61.586 60.000 8.48 0.00 39.17 5.73
8130 9824 4.977963 CACAACAAAATTTCAGTCGATGCT 59.022 37.500 0.00 0.00 0.00 3.79
8136 9830 2.218530 GCCGCACAACAAAATTTCAGTC 59.781 45.455 0.00 0.00 0.00 3.51
8137 9831 2.159114 AGCCGCACAACAAAATTTCAGT 60.159 40.909 0.00 0.00 0.00 3.41
8138 9832 2.219216 CAGCCGCACAACAAAATTTCAG 59.781 45.455 0.00 0.00 0.00 3.02
8139 9833 2.200067 CAGCCGCACAACAAAATTTCA 58.800 42.857 0.00 0.00 0.00 2.69
8140 9834 1.070643 GCAGCCGCACAACAAAATTTC 60.071 47.619 0.00 0.00 38.36 2.17
8141 9835 0.936600 GCAGCCGCACAACAAAATTT 59.063 45.000 0.00 0.00 38.36 1.82
8142 9836 0.179089 TGCAGCCGCACAACAAAATT 60.179 45.000 0.00 0.00 45.36 1.82
8323 10019 1.340991 CCACCATTTCTCGACCCCATT 60.341 52.381 0.00 0.00 0.00 3.16
8324 10020 0.255890 CCACCATTTCTCGACCCCAT 59.744 55.000 0.00 0.00 0.00 4.00
8356 10053 6.539826 ACAGCGCGGCGGTATATATATATATA 59.460 38.462 27.39 15.61 34.87 0.86
8366 10063 3.359515 AACACAGCGCGGCGGTATA 62.360 57.895 27.39 0.00 34.30 1.47
8367 10064 4.752879 AACACAGCGCGGCGGTAT 62.753 61.111 27.39 14.29 34.30 2.73
8373 10070 3.726517 CAAGGGAACACAGCGCGG 61.727 66.667 8.83 5.83 0.00 6.46
8374 10071 3.726517 CCAAGGGAACACAGCGCG 61.727 66.667 0.00 0.00 0.00 6.86
8375 10072 2.193536 AACCAAGGGAACACAGCGC 61.194 57.895 0.00 0.00 0.00 5.92
8376 10073 1.101049 ACAACCAAGGGAACACAGCG 61.101 55.000 0.00 0.00 0.00 5.18
8377 10074 1.111277 AACAACCAAGGGAACACAGC 58.889 50.000 0.00 0.00 0.00 4.40
8378 10075 3.023832 AGAAACAACCAAGGGAACACAG 58.976 45.455 0.00 0.00 0.00 3.66
8379 10076 2.757868 CAGAAACAACCAAGGGAACACA 59.242 45.455 0.00 0.00 0.00 3.72
8380 10077 3.020984 TCAGAAACAACCAAGGGAACAC 58.979 45.455 0.00 0.00 0.00 3.32
8472 10169 5.106442 CCCAACAAGGACAACAAAAACTAC 58.894 41.667 0.00 0.00 41.22 2.73
8473 10170 4.773149 ACCCAACAAGGACAACAAAAACTA 59.227 37.500 0.00 0.00 41.22 2.24
8483 10180 1.070786 GCGAGACCCAACAAGGACA 59.929 57.895 0.00 0.00 41.22 4.02
8496 10193 1.271108 TGCCAACATTTACCAGCGAGA 60.271 47.619 0.00 0.00 0.00 4.04
8503 10200 4.584327 AACAGAACTGCCAACATTTACC 57.416 40.909 1.46 0.00 0.00 2.85
8537 10234 1.489390 CAACATTCGTGCGTGCGTA 59.511 52.632 1.25 0.00 0.00 4.42
8545 10242 0.453282 CAGAAGCGCCAACATTCGTG 60.453 55.000 2.29 0.00 0.00 4.35
8559 10256 4.466828 CACGTTATTGAGGCAAACAGAAG 58.533 43.478 0.00 0.00 0.00 2.85
8588 10285 2.876368 GATGCCTCCCAGGAACACGG 62.876 65.000 0.00 0.00 37.67 4.94
8590 10287 0.393537 CTGATGCCTCCCAGGAACAC 60.394 60.000 0.00 0.00 37.67 3.32
8615 10312 1.442769 GCTTGCATCTTCTCGAACCA 58.557 50.000 0.00 0.00 0.00 3.67
8618 10315 0.246360 TCGGCTTGCATCTTCTCGAA 59.754 50.000 0.00 0.00 0.00 3.71
8621 10318 1.329906 CATGTCGGCTTGCATCTTCTC 59.670 52.381 0.00 0.00 0.00 2.87
8622 10319 1.376543 CATGTCGGCTTGCATCTTCT 58.623 50.000 0.00 0.00 0.00 2.85
8623 10320 0.248377 GCATGTCGGCTTGCATCTTC 60.248 55.000 21.54 0.00 42.96 2.87
8624 10321 0.679002 AGCATGTCGGCTTGCATCTT 60.679 50.000 26.94 6.13 42.71 2.40
8625 10322 1.077930 AGCATGTCGGCTTGCATCT 60.078 52.632 26.94 6.49 42.71 2.90
8626 10323 1.354506 GAGCATGTCGGCTTGCATC 59.645 57.895 26.94 17.65 45.99 3.91
8627 10324 0.961857 TTGAGCATGTCGGCTTGCAT 60.962 50.000 26.94 13.72 45.99 3.96
8628 10325 1.579964 CTTGAGCATGTCGGCTTGCA 61.580 55.000 26.94 7.21 45.99 4.08
8629 10326 1.136147 CTTGAGCATGTCGGCTTGC 59.864 57.895 19.23 19.23 45.99 4.01
8630 10327 0.877071 AACTTGAGCATGTCGGCTTG 59.123 50.000 0.00 0.00 45.99 4.01
8631 10328 1.160137 GAACTTGAGCATGTCGGCTT 58.840 50.000 0.00 0.00 45.99 4.35
8633 10330 1.014044 TCGAACTTGAGCATGTCGGC 61.014 55.000 0.00 0.00 0.00 5.54
8634 10331 0.716108 GTCGAACTTGAGCATGTCGG 59.284 55.000 0.00 0.00 0.00 4.79
8635 10332 0.363512 CGTCGAACTTGAGCATGTCG 59.636 55.000 0.00 0.00 0.00 4.35
8636 10333 1.387084 GTCGTCGAACTTGAGCATGTC 59.613 52.381 0.00 0.00 0.00 3.06
8637 10334 1.419374 GTCGTCGAACTTGAGCATGT 58.581 50.000 0.00 0.00 0.00 3.21
8638 10335 0.363512 CGTCGTCGAACTTGAGCATG 59.636 55.000 0.00 0.00 39.71 4.06
8639 10336 0.240145 TCGTCGTCGAACTTGAGCAT 59.760 50.000 1.37 0.00 43.34 3.79
8640 10337 0.385598 CTCGTCGTCGAACTTGAGCA 60.386 55.000 6.19 0.00 45.61 4.26
8641 10338 0.385723 ACTCGTCGTCGAACTTGAGC 60.386 55.000 6.19 0.00 45.61 4.26
8642 10339 1.070108 TCACTCGTCGTCGAACTTGAG 60.070 52.381 6.19 5.10 45.61 3.02
8643 10340 0.939419 TCACTCGTCGTCGAACTTGA 59.061 50.000 6.19 6.43 45.61 3.02
8644 10341 1.905687 GATCACTCGTCGTCGAACTTG 59.094 52.381 6.19 4.25 45.61 3.16
8645 10342 1.805345 AGATCACTCGTCGTCGAACTT 59.195 47.619 6.19 0.00 45.61 2.66
8646 10343 1.440708 AGATCACTCGTCGTCGAACT 58.559 50.000 6.19 0.00 45.61 3.01
8647 10344 3.281601 CATAGATCACTCGTCGTCGAAC 58.718 50.000 6.19 0.00 45.61 3.95
8648 10345 2.287103 CCATAGATCACTCGTCGTCGAA 59.713 50.000 6.19 0.00 45.61 3.71
8649 10346 1.865340 CCATAGATCACTCGTCGTCGA 59.135 52.381 4.42 4.42 44.12 4.20
8650 10347 1.660614 GCCATAGATCACTCGTCGTCG 60.661 57.143 0.00 0.00 38.55 5.12
8651 10348 1.660614 CGCCATAGATCACTCGTCGTC 60.661 57.143 0.00 0.00 0.00 4.20
8652 10349 0.308068 CGCCATAGATCACTCGTCGT 59.692 55.000 0.00 0.00 0.00 4.34
8653 10350 0.386100 CCGCCATAGATCACTCGTCG 60.386 60.000 0.00 0.00 0.00 5.12
8654 10351 0.669077 ACCGCCATAGATCACTCGTC 59.331 55.000 0.00 0.00 0.00 4.20
8655 10352 1.977056 TACCGCCATAGATCACTCGT 58.023 50.000 0.00 0.00 0.00 4.18
8656 10353 2.922758 GCTTACCGCCATAGATCACTCG 60.923 54.545 0.00 0.00 0.00 4.18
8657 10354 2.678324 GCTTACCGCCATAGATCACTC 58.322 52.381 0.00 0.00 0.00 3.51
8658 10355 1.000163 CGCTTACCGCCATAGATCACT 60.000 52.381 0.00 0.00 34.21 3.41
8659 10356 1.419374 CGCTTACCGCCATAGATCAC 58.581 55.000 0.00 0.00 34.21 3.06
8660 10357 3.886044 CGCTTACCGCCATAGATCA 57.114 52.632 0.00 0.00 34.21 2.92
8685 10382 2.035704 CACACCTGCCAGCATACAAAAA 59.964 45.455 0.00 0.00 0.00 1.94
8686 10383 1.612950 CACACCTGCCAGCATACAAAA 59.387 47.619 0.00 0.00 0.00 2.44
8687 10384 1.246649 CACACCTGCCAGCATACAAA 58.753 50.000 0.00 0.00 0.00 2.83
8688 10385 0.110295 ACACACCTGCCAGCATACAA 59.890 50.000 0.00 0.00 0.00 2.41
8689 10386 0.110295 AACACACCTGCCAGCATACA 59.890 50.000 0.00 0.00 0.00 2.29
8690 10387 0.523072 CAACACACCTGCCAGCATAC 59.477 55.000 0.00 0.00 0.00 2.39
8691 10388 0.399833 TCAACACACCTGCCAGCATA 59.600 50.000 0.00 0.00 0.00 3.14
8692 10389 1.151221 TCAACACACCTGCCAGCAT 59.849 52.632 0.00 0.00 0.00 3.79
8693 10390 1.823470 GTCAACACACCTGCCAGCA 60.823 57.895 0.00 0.00 0.00 4.41
8694 10391 1.174712 ATGTCAACACACCTGCCAGC 61.175 55.000 0.00 0.00 34.48 4.85
8695 10392 0.594602 CATGTCAACACACCTGCCAG 59.405 55.000 0.00 0.00 34.48 4.85
8696 10393 0.182299 TCATGTCAACACACCTGCCA 59.818 50.000 0.00 0.00 34.48 4.92
8697 10394 0.593128 GTCATGTCAACACACCTGCC 59.407 55.000 0.00 0.00 34.48 4.85
8698 10395 0.593128 GGTCATGTCAACACACCTGC 59.407 55.000 6.03 0.00 34.48 4.85
8699 10396 1.603802 GTGGTCATGTCAACACACCTG 59.396 52.381 12.20 0.00 34.48 4.00
8700 10397 1.810031 CGTGGTCATGTCAACACACCT 60.810 52.381 12.20 0.00 34.48 4.00
8701 10398 0.586319 CGTGGTCATGTCAACACACC 59.414 55.000 3.74 6.26 34.48 4.16
8702 10399 0.586319 CCGTGGTCATGTCAACACAC 59.414 55.000 3.74 0.00 34.48 3.82
8703 10400 0.533978 CCCGTGGTCATGTCAACACA 60.534 55.000 3.74 0.00 36.78 3.72
8704 10401 0.250124 TCCCGTGGTCATGTCAACAC 60.250 55.000 0.00 0.00 0.00 3.32
8705 10402 0.034756 CTCCCGTGGTCATGTCAACA 59.965 55.000 0.00 0.00 0.00 3.33
8706 10403 1.298859 GCTCCCGTGGTCATGTCAAC 61.299 60.000 0.00 0.00 0.00 3.18
8707 10404 1.003839 GCTCCCGTGGTCATGTCAA 60.004 57.895 0.00 0.00 0.00 3.18
8708 10405 2.662596 GCTCCCGTGGTCATGTCA 59.337 61.111 0.00 0.00 0.00 3.58
8709 10406 2.125106 GGCTCCCGTGGTCATGTC 60.125 66.667 0.00 0.00 0.00 3.06
8710 10407 4.082523 CGGCTCCCGTGGTCATGT 62.083 66.667 0.00 0.00 42.73 3.21
8725 10422 3.925362 TTCGACCACGCCATCACGG 62.925 63.158 0.00 0.00 39.58 4.94
8726 10423 2.431771 TTCGACCACGCCATCACG 60.432 61.111 0.00 0.00 39.58 4.35
8727 10424 1.352156 GAGTTCGACCACGCCATCAC 61.352 60.000 0.00 0.00 39.58 3.06
8728 10425 1.080093 GAGTTCGACCACGCCATCA 60.080 57.895 0.00 0.00 39.58 3.07
8729 10426 0.669318 TTGAGTTCGACCACGCCATC 60.669 55.000 0.00 0.00 39.58 3.51
8730 10427 0.670546 CTTGAGTTCGACCACGCCAT 60.671 55.000 0.00 0.00 39.58 4.40
8731 10428 1.300620 CTTGAGTTCGACCACGCCA 60.301 57.895 0.00 0.00 39.58 5.69
8732 10429 1.282930 GACTTGAGTTCGACCACGCC 61.283 60.000 0.00 0.00 39.58 5.68
8733 10430 0.318784 AGACTTGAGTTCGACCACGC 60.319 55.000 0.00 0.00 39.58 5.34
8734 10431 1.001706 TGAGACTTGAGTTCGACCACG 60.002 52.381 0.00 0.00 41.26 4.94
8735 10432 2.795175 TGAGACTTGAGTTCGACCAC 57.205 50.000 0.00 0.00 0.00 4.16
8736 10433 2.231478 GGATGAGACTTGAGTTCGACCA 59.769 50.000 0.00 0.00 0.00 4.02
8737 10434 2.494073 AGGATGAGACTTGAGTTCGACC 59.506 50.000 0.00 0.00 0.00 4.79
8738 10435 3.859411 AGGATGAGACTTGAGTTCGAC 57.141 47.619 0.00 0.00 0.00 4.20
8739 10436 4.873746 AAAGGATGAGACTTGAGTTCGA 57.126 40.909 0.00 0.00 0.00 3.71
8740 10437 5.931441 AAAAAGGATGAGACTTGAGTTCG 57.069 39.130 0.00 0.00 0.00 3.95
8761 10458 2.686235 GCACACATGCCAGCATAAAAA 58.314 42.857 4.52 0.00 46.97 1.94
8762 10459 2.367030 GCACACATGCCAGCATAAAA 57.633 45.000 4.52 0.00 46.97 1.52
8787 10484 1.937278 CACACATGCCAGCACAAAAA 58.063 45.000 0.00 0.00 0.00 1.94
8788 10485 0.530211 GCACACATGCCAGCACAAAA 60.530 50.000 0.00 0.00 46.97 2.44
8789 10486 1.067749 GCACACATGCCAGCACAAA 59.932 52.632 0.00 0.00 46.97 2.83
8790 10487 2.729455 GCACACATGCCAGCACAA 59.271 55.556 0.00 0.00 46.97 3.33
8824 10521 1.021390 ACCACAGTTCATGCTAGCGC 61.021 55.000 10.77 0.00 0.00 5.92
8825 10522 0.723414 CACCACAGTTCATGCTAGCG 59.277 55.000 10.77 0.00 0.00 4.26
8826 10523 2.099141 TCACCACAGTTCATGCTAGC 57.901 50.000 8.10 8.10 0.00 3.42
8827 10524 6.932356 AAATATCACCACAGTTCATGCTAG 57.068 37.500 0.00 0.00 0.00 3.42
8828 10525 7.701539 AAAAATATCACCACAGTTCATGCTA 57.298 32.000 0.00 0.00 0.00 3.49
8829 10526 6.594788 AAAAATATCACCACAGTTCATGCT 57.405 33.333 0.00 0.00 0.00 3.79
8862 10559 1.729276 CCAGCACCGGCATACAATG 59.271 57.895 0.00 0.00 44.61 2.82
8863 10560 4.240881 CCAGCACCGGCATACAAT 57.759 55.556 0.00 0.00 44.61 2.71
8880 10577 3.896133 CTCATGCCGGCACCATGC 61.896 66.667 35.50 0.00 44.08 4.06
8881 10578 2.124612 TCTCATGCCGGCACCATG 60.125 61.111 35.50 26.75 41.03 3.66
8882 10579 2.124570 GTCTCATGCCGGCACCAT 60.125 61.111 35.50 14.65 0.00 3.55
8883 10580 2.970379 ATGTCTCATGCCGGCACCA 61.970 57.895 35.50 22.60 0.00 4.17
8884 10581 2.124570 ATGTCTCATGCCGGCACC 60.125 61.111 35.50 17.52 0.00 5.01
8885 10582 2.475466 CCATGTCTCATGCCGGCAC 61.475 63.158 35.50 19.90 0.00 5.01
8886 10583 2.124612 CCATGTCTCATGCCGGCA 60.125 61.111 34.80 34.80 0.00 5.69
8887 10584 3.589881 GCCATGTCTCATGCCGGC 61.590 66.667 22.73 22.73 0.00 6.13
8888 10585 2.903855 GGCCATGTCTCATGCCGG 60.904 66.667 0.00 0.00 33.59 6.13
8890 10587 3.589881 GCGGCCATGTCTCATGCC 61.590 66.667 2.24 8.14 40.54 4.40
8891 10588 2.515523 AGCGGCCATGTCTCATGC 60.516 61.111 2.24 0.00 0.00 4.06
8892 10589 2.184830 CCAGCGGCCATGTCTCATG 61.185 63.158 2.24 3.11 0.00 3.07
8893 10590 2.191375 CCAGCGGCCATGTCTCAT 59.809 61.111 2.24 0.00 0.00 2.90
8894 10591 4.783621 GCCAGCGGCCATGTCTCA 62.784 66.667 2.24 0.00 44.06 3.27
8904 10601 2.202919 TGACGATCATGCCAGCGG 60.203 61.111 0.00 0.00 0.00 5.52
8905 10602 1.520120 ACTGACGATCATGCCAGCG 60.520 57.895 0.00 0.00 0.00 5.18
8906 10603 1.434622 CCACTGACGATCATGCCAGC 61.435 60.000 0.00 0.00 0.00 4.85
8907 10604 0.812811 CCCACTGACGATCATGCCAG 60.813 60.000 0.00 0.00 0.00 4.85
8908 10605 1.221566 CCCACTGACGATCATGCCA 59.778 57.895 0.00 0.00 0.00 4.92
8909 10606 0.811616 GACCCACTGACGATCATGCC 60.812 60.000 0.00 0.00 0.00 4.40
8910 10607 0.176680 AGACCCACTGACGATCATGC 59.823 55.000 0.00 0.00 0.00 4.06
8911 10608 2.680312 AAGACCCACTGACGATCATG 57.320 50.000 0.00 0.00 0.00 3.07
8912 10609 3.703001 AAAAGACCCACTGACGATCAT 57.297 42.857 0.00 0.00 0.00 2.45
8913 10610 3.485463 AAAAAGACCCACTGACGATCA 57.515 42.857 0.00 0.00 0.00 2.92
8937 10634 8.877779 CCATTTCATGTCCGCATTTAATTTTAA 58.122 29.630 0.00 0.00 31.99 1.52
8938 10635 8.253810 TCCATTTCATGTCCGCATTTAATTTTA 58.746 29.630 0.00 0.00 31.99 1.52
8939 10636 7.102346 TCCATTTCATGTCCGCATTTAATTTT 58.898 30.769 0.00 0.00 31.99 1.82
8940 10637 6.638610 TCCATTTCATGTCCGCATTTAATTT 58.361 32.000 0.00 0.00 31.99 1.82
8941 10638 6.219417 TCCATTTCATGTCCGCATTTAATT 57.781 33.333 0.00 0.00 31.99 1.40
8942 10639 5.850557 TCCATTTCATGTCCGCATTTAAT 57.149 34.783 0.00 0.00 31.99 1.40
8943 10640 5.505489 CGATCCATTTCATGTCCGCATTTAA 60.505 40.000 0.00 0.00 31.99 1.52
8944 10641 4.024133 CGATCCATTTCATGTCCGCATTTA 60.024 41.667 0.00 0.00 31.99 1.40
8945 10642 3.243168 CGATCCATTTCATGTCCGCATTT 60.243 43.478 0.00 0.00 31.99 2.32
8946 10643 2.291465 CGATCCATTTCATGTCCGCATT 59.709 45.455 0.00 0.00 31.99 3.56
8947 10644 1.875514 CGATCCATTTCATGTCCGCAT 59.124 47.619 0.00 0.00 35.32 4.73
8948 10645 1.134551 TCGATCCATTTCATGTCCGCA 60.135 47.619 0.00 0.00 0.00 5.69
8949 10646 1.581934 TCGATCCATTTCATGTCCGC 58.418 50.000 0.00 0.00 0.00 5.54
8950 10647 3.059393 CACATCGATCCATTTCATGTCCG 60.059 47.826 0.00 0.00 0.00 4.79
8951 10648 3.879295 ACACATCGATCCATTTCATGTCC 59.121 43.478 0.00 0.00 0.00 4.02
8952 10649 5.268544 CAACACATCGATCCATTTCATGTC 58.731 41.667 0.00 0.00 0.00 3.06
8953 10650 4.096833 CCAACACATCGATCCATTTCATGT 59.903 41.667 0.00 0.00 0.00 3.21
8954 10651 4.498513 CCCAACACATCGATCCATTTCATG 60.499 45.833 0.00 0.00 0.00 3.07
8955 10652 3.633525 CCCAACACATCGATCCATTTCAT 59.366 43.478 0.00 0.00 0.00 2.57
8956 10653 3.016031 CCCAACACATCGATCCATTTCA 58.984 45.455 0.00 0.00 0.00 2.69
8957 10654 2.223572 GCCCAACACATCGATCCATTTC 60.224 50.000 0.00 0.00 0.00 2.17
8958 10655 1.750778 GCCCAACACATCGATCCATTT 59.249 47.619 0.00 0.00 0.00 2.32
8959 10656 1.392589 GCCCAACACATCGATCCATT 58.607 50.000 0.00 0.00 0.00 3.16
8960 10657 0.815213 CGCCCAACACATCGATCCAT 60.815 55.000 0.00 0.00 0.00 3.41
8961 10658 1.449423 CGCCCAACACATCGATCCA 60.449 57.895 0.00 0.00 0.00 3.41
8962 10659 2.823829 GCGCCCAACACATCGATCC 61.824 63.158 0.00 0.00 0.00 3.36
8963 10660 2.106074 TGCGCCCAACACATCGATC 61.106 57.895 4.18 0.00 0.00 3.69
8964 10661 2.046411 TGCGCCCAACACATCGAT 60.046 55.556 4.18 0.00 0.00 3.59
8965 10662 3.047280 GTGCGCCCAACACATCGA 61.047 61.111 4.18 0.00 37.96 3.59
8966 10663 3.049674 AGTGCGCCCAACACATCG 61.050 61.111 4.18 0.00 40.59 3.84
8967 10664 2.562912 CAGTGCGCCCAACACATC 59.437 61.111 4.18 0.00 40.59 3.06
8968 10665 3.673484 GCAGTGCGCCCAACACAT 61.673 61.111 4.18 0.00 40.59 3.21
8977 10674 2.764314 ATTTGGATCGGCAGTGCGC 61.764 57.895 9.45 0.00 41.28 6.09
8978 10675 1.063006 CATTTGGATCGGCAGTGCG 59.937 57.895 9.45 4.79 0.00 5.34
8979 10676 1.226773 GCATTTGGATCGGCAGTGC 60.227 57.895 6.55 6.55 0.00 4.40
8980 10677 0.527113 TTGCATTTGGATCGGCAGTG 59.473 50.000 0.00 0.00 37.59 3.66
8981 10678 1.255882 TTTGCATTTGGATCGGCAGT 58.744 45.000 0.00 0.00 37.59 4.40
8982 10679 1.994779 GTTTTGCATTTGGATCGGCAG 59.005 47.619 0.00 0.00 37.59 4.85
8983 10680 1.617850 AGTTTTGCATTTGGATCGGCA 59.382 42.857 0.00 0.00 0.00 5.69
8984 10681 1.994779 CAGTTTTGCATTTGGATCGGC 59.005 47.619 0.00 0.00 0.00 5.54
8985 10682 3.574284 TCAGTTTTGCATTTGGATCGG 57.426 42.857 0.00 0.00 0.00 4.18
8986 10683 3.361644 CGTTCAGTTTTGCATTTGGATCG 59.638 43.478 0.00 0.00 0.00 3.69
8987 10684 3.674753 CCGTTCAGTTTTGCATTTGGATC 59.325 43.478 0.00 0.00 0.00 3.36
8988 10685 3.320541 TCCGTTCAGTTTTGCATTTGGAT 59.679 39.130 0.00 0.00 0.00 3.41
8989 10686 2.690497 TCCGTTCAGTTTTGCATTTGGA 59.310 40.909 0.00 0.00 0.00 3.53
8990 10687 2.794350 GTCCGTTCAGTTTTGCATTTGG 59.206 45.455 0.00 0.00 0.00 3.28
8991 10688 2.467305 CGTCCGTTCAGTTTTGCATTTG 59.533 45.455 0.00 0.00 0.00 2.32
8992 10689 2.726633 CGTCCGTTCAGTTTTGCATTT 58.273 42.857 0.00 0.00 0.00 2.32
8993 10690 1.599419 GCGTCCGTTCAGTTTTGCATT 60.599 47.619 0.00 0.00 0.00 3.56
8994 10691 0.040425 GCGTCCGTTCAGTTTTGCAT 60.040 50.000 0.00 0.00 0.00 3.96
8995 10692 1.353804 GCGTCCGTTCAGTTTTGCA 59.646 52.632 0.00 0.00 0.00 4.08
8996 10693 1.370051 GGCGTCCGTTCAGTTTTGC 60.370 57.895 0.00 0.00 0.00 3.68
8997 10694 1.083015 CGGCGTCCGTTCAGTTTTG 60.083 57.895 9.69 0.00 42.73 2.44
8998 10695 2.248835 CCGGCGTCCGTTCAGTTTT 61.249 57.895 15.38 0.00 46.80 2.43
8999 10696 2.663852 CCGGCGTCCGTTCAGTTT 60.664 61.111 15.38 0.00 46.80 2.66
9000 10697 3.608662 TCCGGCGTCCGTTCAGTT 61.609 61.111 15.38 0.00 46.80 3.16
9001 10698 4.353437 GTCCGGCGTCCGTTCAGT 62.353 66.667 15.38 0.00 46.80 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.