Multiple sequence alignment - TraesCS5B01G023400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G023400 chr5B 100.000 9538 0 0 1 9538 21607365 21597828 0.000000e+00 17614.0
1 TraesCS5B01G023400 chr5B 94.261 1028 30 11 8415 9437 21526638 21527641 0.000000e+00 1544.0
2 TraesCS5B01G023400 chr5B 88.197 932 39 27 611 1523 21524306 21525185 0.000000e+00 1046.0
3 TraesCS5B01G023400 chr5B 91.289 574 45 3 1 572 21523737 21524307 0.000000e+00 778.0
4 TraesCS5B01G023400 chr5B 92.330 339 10 7 7233 7559 21525516 21525850 1.450000e-127 468.0
5 TraesCS5B01G023400 chr5B 96.618 207 3 1 8216 8418 21526324 21526530 3.300000e-89 340.0
6 TraesCS5B01G023400 chr5B 94.581 203 10 1 1683 1884 21525206 21525408 7.190000e-81 313.0
7 TraesCS5B01G023400 chr5B 93.567 171 3 4 7997 8159 21526009 21526179 2.060000e-61 248.0
8 TraesCS5B01G023400 chr5B 98.780 82 1 0 9457 9538 21527634 21527715 7.720000e-31 147.0
9 TraesCS5B01G023400 chr5B 85.926 135 13 5 1523 1655 621396552 621396682 1.290000e-28 139.0
10 TraesCS5B01G023400 chr5B 89.362 94 8 2 7554 7647 543544937 543544846 6.050000e-22 117.0
11 TraesCS5B01G023400 chr5B 77.626 219 23 15 8216 8418 21413119 21413327 1.010000e-19 110.0
12 TraesCS5B01G023400 chr5B 97.619 42 0 1 8179 8220 21525823 21525783 4.780000e-08 71.3
13 TraesCS5B01G023400 chr2B 99.052 5274 49 1 1884 7157 785974740 785969468 0.000000e+00 9461.0
14 TraesCS5B01G023400 chr2B 91.257 183 8 5 7803 7978 93400637 93400818 9.570000e-60 243.0
15 TraesCS5B01G023400 chr7B 98.862 5272 53 2 1885 7150 458854607 458849337 0.000000e+00 9396.0
16 TraesCS5B01G023400 chr7B 98.804 5269 53 5 1882 7150 507845219 507839961 0.000000e+00 9372.0
17 TraesCS5B01G023400 chr7B 82.482 137 22 2 7847 7981 237498715 237498851 1.680000e-22 119.0
18 TraesCS5B01G023400 chr7B 87.879 99 5 5 7554 7650 721570827 721570734 1.010000e-19 110.0
19 TraesCS5B01G023400 chr5A 98.844 5275 52 4 1884 7150 32758261 32752988 0.000000e+00 9395.0
20 TraesCS5B01G023400 chr5A 87.629 582 59 5 1 572 19678867 19679445 0.000000e+00 664.0
21 TraesCS5B01G023400 chr5A 81.409 667 87 25 8699 9343 19861931 19862582 2.380000e-140 510.0
22 TraesCS5B01G023400 chr5A 80.505 713 72 45 819 1516 19910721 19911381 1.440000e-132 484.0
23 TraesCS5B01G023400 chr5A 86.331 417 34 12 8417 8832 19913251 19913645 5.290000e-117 433.0
24 TraesCS5B01G023400 chr5A 83.514 461 48 14 7982 8418 19681465 19681921 1.150000e-108 405.0
25 TraesCS5B01G023400 chr5A 86.494 348 35 6 7238 7582 19680830 19681168 1.170000e-98 372.0
26 TraesCS5B01G023400 chr5A 84.960 379 30 11 944 1312 19679898 19680259 9.110000e-95 359.0
27 TraesCS5B01G023400 chr5A 86.784 227 18 5 8415 8640 19682032 19682247 9.570000e-60 243.0
28 TraesCS5B01G023400 chr5A 86.875 160 18 1 1725 1884 19680562 19680718 9.840000e-40 176.0
29 TraesCS5B01G023400 chr5A 94.059 101 5 1 7982 8081 19912353 19912453 1.660000e-32 152.0
30 TraesCS5B01G023400 chr5A 79.556 225 20 12 7600 7806 19681259 19681475 4.650000e-28 137.0
31 TraesCS5B01G023400 chr5A 88.119 101 10 2 7557 7655 534364560 534364460 1.680000e-22 119.0
32 TraesCS5B01G023400 chr5A 88.776 98 4 3 7555 7651 406990513 406990604 7.830000e-21 113.0
33 TraesCS5B01G023400 chr1B 98.880 5268 49 5 1885 7151 552960203 552954945 0.000000e+00 9393.0
34 TraesCS5B01G023400 chr7A 98.825 5276 52 3 1885 7150 20028309 20033584 0.000000e+00 9391.0
35 TraesCS5B01G023400 chr7A 97.778 45 0 1 7803 7846 716451536 716451580 1.030000e-09 76.8
36 TraesCS5B01G023400 chr4B 98.824 5272 56 1 1885 7150 72894179 72899450 0.000000e+00 9387.0
37 TraesCS5B01G023400 chr4B 84.397 141 17 4 1524 1660 529853214 529853075 6.010000e-27 134.0
38 TraesCS5B01G023400 chr4B 95.455 44 1 1 7803 7845 14654384 14654427 1.720000e-07 69.4
39 TraesCS5B01G023400 chr6A 98.805 5273 55 4 1884 7151 569112321 569117590 0.000000e+00 9382.0
40 TraesCS5B01G023400 chr6A 84.043 188 17 10 7803 7982 499589728 499589910 1.650000e-37 169.0
41 TraesCS5B01G023400 chr4A 98.786 5272 58 3 1883 7150 594448526 594443257 0.000000e+00 9376.0
42 TraesCS5B01G023400 chr4A 86.992 123 14 2 1523 1644 703301818 703301697 4.650000e-28 137.0
43 TraesCS5B01G023400 chr4A 90.110 91 7 2 7557 7647 691993438 691993350 6.050000e-22 117.0
44 TraesCS5B01G023400 chr5D 83.787 956 102 34 8415 9343 29134299 29135228 0.000000e+00 857.0
45 TraesCS5B01G023400 chr5D 88.163 566 57 6 14 572 28946601 28947163 0.000000e+00 665.0
46 TraesCS5B01G023400 chr5D 84.488 722 60 29 819 1516 29132144 29132837 0.000000e+00 665.0
47 TraesCS5B01G023400 chr5D 87.555 458 30 17 7151 7593 29133060 29133505 1.110000e-138 505.0
48 TraesCS5B01G023400 chr5D 83.921 454 47 13 7982 8418 28948140 28948584 2.480000e-110 411.0
49 TraesCS5B01G023400 chr5D 81.614 446 42 15 7982 8414 29133776 29134194 5.520000e-87 333.0
50 TraesCS5B01G023400 chr5D 89.796 245 13 5 8415 8658 28949429 28949662 4.330000e-78 303.0
51 TraesCS5B01G023400 chr5D 90.811 185 13 2 1694 1877 29132873 29133054 2.660000e-60 244.0
52 TraesCS5B01G023400 chr5D 89.091 110 11 1 1520 1628 400318765 400318874 1.670000e-27 135.0
53 TraesCS5B01G023400 chr5D 78.238 193 32 9 7798 7981 560026002 560026193 2.180000e-21 115.0
54 TraesCS5B01G023400 chr5D 92.308 78 3 3 7730 7806 29133711 29133786 3.640000e-19 108.0
55 TraesCS5B01G023400 chr5D 82.243 107 6 2 728 821 29132015 29132121 7.940000e-11 80.5
56 TraesCS5B01G023400 chr6D 93.814 97 6 0 1520 1616 193490931 193491027 7.720000e-31 147.0
57 TraesCS5B01G023400 chr3D 93.814 97 6 0 1520 1616 523253325 523253421 7.720000e-31 147.0
58 TraesCS5B01G023400 chr3D 97.727 44 1 0 7803 7846 295043657 295043700 1.030000e-09 76.8
59 TraesCS5B01G023400 chr7D 85.484 124 16 2 1520 1643 232172161 232172282 2.800000e-25 128.0
60 TraesCS5B01G023400 chr2D 84.211 133 18 3 1523 1653 134786779 134786648 1.010000e-24 126.0
61 TraesCS5B01G023400 chr2D 85.124 121 18 0 1523 1643 600738227 600738107 3.620000e-24 124.0
62 TraesCS5B01G023400 chr2D 91.111 90 7 1 7558 7647 566655083 566655171 4.680000e-23 121.0
63 TraesCS5B01G023400 chr2A 91.304 92 7 1 7558 7648 96243130 96243039 3.620000e-24 124.0
64 TraesCS5B01G023400 chr3B 90.110 91 7 2 7557 7647 658753825 658753913 6.050000e-22 117.0
65 TraesCS5B01G023400 chr3B 86.585 82 9 2 370 450 498371291 498371211 1.320000e-13 89.8
66 TraesCS5B01G023400 chr1A 79.167 168 32 2 360 526 119735240 119735405 7.830000e-21 113.0
67 TraesCS5B01G023400 chr1A 97.778 45 0 1 7802 7846 132792779 132792736 1.030000e-09 76.8
68 TraesCS5B01G023400 chr6B 85.321 109 11 5 7554 7662 139674246 139674143 3.640000e-19 108.0
69 TraesCS5B01G023400 chrUn 82.558 86 8 6 7804 7884 316545087 316545004 1.720000e-07 69.4
70 TraesCS5B01G023400 chr4D 93.478 46 1 2 7802 7846 486787219 486787263 6.180000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G023400 chr5B 21597828 21607365 9537 True 17614.000000 17614 100.000000 1 9538 1 chr5B.!!$R2 9537
1 TraesCS5B01G023400 chr5B 21523737 21527715 3978 False 610.500000 1544 93.702875 1 9538 8 chr5B.!!$F3 9537
2 TraesCS5B01G023400 chr2B 785969468 785974740 5272 True 9461.000000 9461 99.052000 1884 7157 1 chr2B.!!$R1 5273
3 TraesCS5B01G023400 chr7B 458849337 458854607 5270 True 9396.000000 9396 98.862000 1885 7150 1 chr7B.!!$R1 5265
4 TraesCS5B01G023400 chr7B 507839961 507845219 5258 True 9372.000000 9372 98.804000 1882 7150 1 chr7B.!!$R2 5268
5 TraesCS5B01G023400 chr5A 32752988 32758261 5273 True 9395.000000 9395 98.844000 1884 7150 1 chr5A.!!$R1 5266
6 TraesCS5B01G023400 chr5A 19861931 19862582 651 False 510.000000 510 81.409000 8699 9343 1 chr5A.!!$F1 644
7 TraesCS5B01G023400 chr5A 19910721 19913645 2924 False 356.333333 484 86.965000 819 8832 3 chr5A.!!$F4 8013
8 TraesCS5B01G023400 chr5A 19678867 19682247 3380 False 336.571429 664 85.116000 1 8640 7 chr5A.!!$F3 8639
9 TraesCS5B01G023400 chr1B 552954945 552960203 5258 True 9393.000000 9393 98.880000 1885 7151 1 chr1B.!!$R1 5266
10 TraesCS5B01G023400 chr7A 20028309 20033584 5275 False 9391.000000 9391 98.825000 1885 7150 1 chr7A.!!$F1 5265
11 TraesCS5B01G023400 chr4B 72894179 72899450 5271 False 9387.000000 9387 98.824000 1885 7150 1 chr4B.!!$F2 5265
12 TraesCS5B01G023400 chr6A 569112321 569117590 5269 False 9382.000000 9382 98.805000 1884 7151 1 chr6A.!!$F2 5267
13 TraesCS5B01G023400 chr4A 594443257 594448526 5269 True 9376.000000 9376 98.786000 1883 7150 1 chr4A.!!$R1 5267
14 TraesCS5B01G023400 chr5D 28946601 28949662 3061 False 459.666667 665 87.293333 14 8658 3 chr5D.!!$F3 8644
15 TraesCS5B01G023400 chr5D 29132015 29135228 3213 False 398.928571 857 86.115143 728 9343 7 chr5D.!!$F4 8615

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
679 711 0.319211 CGTACCAGCACCGTTTGAGA 60.319 55.000 0.00 0.00 0.00 3.27 F
1824 2111 0.250467 ATGACCGTGTTCAGCAAGCT 60.250 50.000 0.00 0.00 0.00 3.74 F
1870 2157 2.219458 TCGTATGACTCGACTGATCCC 58.781 52.381 0.00 0.00 32.30 3.85 F
3087 3388 1.169577 ACTGAGCAACGAGTCGAGAT 58.830 50.000 21.50 9.99 0.00 2.75 F
4295 4598 3.054875 AGCATGTCCACATACACATCAGT 60.055 43.478 0.00 0.00 34.26 3.41 F
5888 6194 0.609406 CTCTGATCCGGATCGCCCTA 60.609 60.000 33.49 18.44 40.63 3.53 F
7448 7800 0.594284 GCACCTACTACGCGGATGTC 60.594 60.000 12.47 0.00 0.00 3.06 F
7980 8651 0.179000 AATTCCTAGCTCCGCCACTG 59.821 55.000 0.00 0.00 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2010 2302 0.171903 GAAGCGGACGTAACCTAGCA 59.828 55.000 0.00 0.0 0.00 3.49 R
2912 3213 1.304381 GCTGTCCAATGGAGGCCAA 60.304 57.895 5.01 0.0 36.95 4.52 R
3797 4099 1.336517 CCGAACTCCACTAAAGACGCA 60.337 52.381 0.00 0.0 0.00 5.24 R
4345 4648 1.551883 GATGCATGGGCCAAAAGAGTT 59.448 47.619 11.89 0.0 40.13 3.01 R
6261 6567 0.314935 GGGTGTAGTCGTCGGTTTGA 59.685 55.000 0.00 0.0 0.00 2.69 R
7835 8506 0.183731 CAAATCAGGTAGGGAGGGCC 59.816 60.000 0.00 0.0 0.00 5.80 R
8491 10533 0.176680 ACCTATGCTCACGGCTGAAG 59.823 55.000 0.00 0.0 42.39 3.02 R
9444 11518 4.284490 TCTTGAGTATTGACAGAGTTGCCT 59.716 41.667 0.00 0.0 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.925043 TTTAAATGAGCATTTCAATGGCAAT 57.075 28.000 11.38 0.00 40.99 3.56
38 43 8.489559 CATTTCAATGGCAATAAATGTTATCCG 58.510 33.333 17.52 0.00 35.55 4.18
54 59 8.736751 ATGTTATCCGTTTCAATAACAACAAC 57.263 30.769 10.83 0.00 46.04 3.32
68 73 5.371115 AACAACAACCGTATCCATTTCAG 57.629 39.130 0.00 0.00 0.00 3.02
88 93 4.988540 TCAGTAACCAAAACATCAGTCTCG 59.011 41.667 0.00 0.00 0.00 4.04
123 129 5.673337 ACCGATATCATTCATCAAAACCG 57.327 39.130 3.12 0.00 0.00 4.44
125 131 5.236478 ACCGATATCATTCATCAAAACCGTC 59.764 40.000 3.12 0.00 0.00 4.79
207 218 9.002600 TGCATATGAAATTATCGCTTCACTTAT 57.997 29.630 6.97 0.00 34.52 1.73
279 290 8.961294 TTTATTTAAATTGATTGGGGCATCAG 57.039 30.769 5.91 0.00 0.00 2.90
313 324 5.535333 CGGTTAGAACATATCCAATACCGT 58.465 41.667 0.00 0.00 40.63 4.83
374 390 2.159366 CGAAGTCGAAGTAGCCACAGAT 60.159 50.000 0.00 0.00 43.02 2.90
413 429 3.463944 GAACGTTCCCTCTCACTGAAAA 58.536 45.455 17.68 0.00 0.00 2.29
424 440 0.865111 CACTGAAAACACATCGCCGA 59.135 50.000 0.00 0.00 0.00 5.54
477 494 4.213270 CGAGCACCAATGTAAGTTTGAGAA 59.787 41.667 0.00 0.00 0.00 2.87
499 516 0.393537 GAACTCTGATGGGCAGTGGG 60.394 60.000 0.00 0.00 45.14 4.61
502 519 1.135094 CTCTGATGGGCAGTGGGTAT 58.865 55.000 0.00 0.00 45.14 2.73
503 520 0.839277 TCTGATGGGCAGTGGGTATG 59.161 55.000 0.00 0.00 45.14 2.39
527 544 5.077564 ACTCTTTTTCTAACCATCCAACCC 58.922 41.667 0.00 0.00 0.00 4.11
577 596 9.489084 TTGTTAGATATACAACTGATGCCATAC 57.511 33.333 0.00 0.00 30.96 2.39
578 597 7.812669 TGTTAGATATACAACTGATGCCATACG 59.187 37.037 1.79 0.00 0.00 3.06
579 598 5.171476 AGATATACAACTGATGCCATACGC 58.829 41.667 0.00 0.00 38.31 4.42
609 628 8.511604 AAAAAGATATACAACTGATGTGGAGG 57.488 34.615 0.34 0.00 43.77 4.30
645 676 2.009051 GCACGATTCATGATGGTGTGA 58.991 47.619 17.10 0.00 43.85 3.58
679 711 0.319211 CGTACCAGCACCGTTTGAGA 60.319 55.000 0.00 0.00 0.00 3.27
702 737 1.064685 GGGACACCGGAATTCTCCATT 60.065 52.381 9.46 0.00 42.58 3.16
709 744 4.100189 CACCGGAATTCTCCATTCTACTCT 59.900 45.833 9.46 0.00 42.58 3.24
710 745 5.302059 CACCGGAATTCTCCATTCTACTCTA 59.698 44.000 9.46 0.00 42.58 2.43
711 746 5.536916 ACCGGAATTCTCCATTCTACTCTAG 59.463 44.000 9.46 0.00 42.58 2.43
712 747 5.536916 CCGGAATTCTCCATTCTACTCTAGT 59.463 44.000 5.23 0.00 42.58 2.57
713 748 6.041069 CCGGAATTCTCCATTCTACTCTAGTT 59.959 42.308 5.23 0.00 42.58 2.24
714 749 7.418025 CCGGAATTCTCCATTCTACTCTAGTTT 60.418 40.741 5.23 0.00 42.58 2.66
715 750 7.436673 CGGAATTCTCCATTCTACTCTAGTTTG 59.563 40.741 5.23 0.00 42.58 2.93
716 751 7.713073 GGAATTCTCCATTCTACTCTAGTTTGG 59.287 40.741 5.23 0.00 41.22 3.28
717 752 7.741554 ATTCTCCATTCTACTCTAGTTTGGT 57.258 36.000 0.00 0.00 33.57 3.67
718 753 6.777213 TCTCCATTCTACTCTAGTTTGGTC 57.223 41.667 0.00 0.00 33.57 4.02
719 754 5.657302 TCTCCATTCTACTCTAGTTTGGTCC 59.343 44.000 0.00 0.00 33.57 4.46
720 755 4.715297 TCCATTCTACTCTAGTTTGGTCCC 59.285 45.833 0.00 0.00 33.57 4.46
721 756 4.441634 CCATTCTACTCTAGTTTGGTCCCG 60.442 50.000 0.00 0.00 0.00 5.14
722 757 3.726557 TCTACTCTAGTTTGGTCCCGA 57.273 47.619 0.00 0.00 0.00 5.14
723 758 3.350833 TCTACTCTAGTTTGGTCCCGAC 58.649 50.000 0.00 0.00 0.00 4.79
769 827 2.149803 ATCCGTCCGAAACAGCGTCA 62.150 55.000 0.00 0.00 0.00 4.35
841 924 0.539438 TCGAGCCCATGGTTTTGCTT 60.539 50.000 11.73 0.00 33.41 3.91
901 1094 2.023532 CTCCTCTCCTCCTTCCCCT 58.976 63.158 0.00 0.00 0.00 4.79
913 1106 1.073098 CTTCCCCTACCACCACCTTT 58.927 55.000 0.00 0.00 0.00 3.11
914 1107 0.774908 TTCCCCTACCACCACCTTTG 59.225 55.000 0.00 0.00 0.00 2.77
915 1108 1.304134 CCCCTACCACCACCTTTGC 60.304 63.158 0.00 0.00 0.00 3.68
921 1114 1.303643 CCACCACCTTTGCTCCTCC 60.304 63.158 0.00 0.00 0.00 4.30
924 1117 2.234296 CCACCTTTGCTCCTCCCCT 61.234 63.158 0.00 0.00 0.00 4.79
925 1118 1.001641 CACCTTTGCTCCTCCCCTG 60.002 63.158 0.00 0.00 0.00 4.45
926 1119 1.151810 ACCTTTGCTCCTCCCCTGA 60.152 57.895 0.00 0.00 0.00 3.86
941 1140 2.629137 CCCCTGAGTCTGATCTCATCTG 59.371 54.545 9.36 3.98 42.47 2.90
942 1141 3.298619 CCCTGAGTCTGATCTCATCTGT 58.701 50.000 9.36 0.00 42.47 3.41
987 1186 2.520039 CGTGCGCTGCTGGTGATAG 61.520 63.158 9.73 0.00 0.00 2.08
988 1187 1.448540 GTGCGCTGCTGGTGATAGT 60.449 57.895 9.73 0.00 0.00 2.12
989 1188 1.448365 TGCGCTGCTGGTGATAGTG 60.448 57.895 9.73 0.00 0.00 2.74
990 1189 1.153568 GCGCTGCTGGTGATAGTGA 60.154 57.895 0.00 0.00 0.00 3.41
991 1190 0.531532 GCGCTGCTGGTGATAGTGAT 60.532 55.000 0.00 0.00 0.00 3.06
1104 1312 3.175240 CAAGCGAGGAGACGTGCG 61.175 66.667 0.00 0.00 39.81 5.34
1225 1445 2.513897 GGGCCATGCTCGGTACAC 60.514 66.667 4.39 0.00 0.00 2.90
1226 1446 2.890474 GGCCATGCTCGGTACACG 60.890 66.667 0.00 0.00 46.11 4.49
1227 1447 3.564027 GCCATGCTCGGTACACGC 61.564 66.667 0.00 0.00 43.86 5.34
1228 1448 3.254654 CCATGCTCGGTACACGCG 61.255 66.667 3.53 3.53 43.86 6.01
1266 1493 3.152261 TGTTCCGCGTGTTCAAAATTT 57.848 38.095 4.92 0.00 0.00 1.82
1343 1616 7.500227 TGGATTGATGACTGAATTCTGGTTATC 59.500 37.037 19.53 19.53 0.00 1.75
1344 1617 7.718753 GGATTGATGACTGAATTCTGGTTATCT 59.281 37.037 23.08 13.16 30.63 1.98
1357 1630 4.517075 TCTGGTTATCTCTATCTGCAGACG 59.483 45.833 20.97 13.51 0.00 4.18
1412 1685 3.135530 GGCATGAGGTTCTTCAGGACTAT 59.864 47.826 0.00 0.00 34.18 2.12
1479 1759 8.204160 ACCATATACGAATCTGACAATTTCTCA 58.796 33.333 0.00 0.00 0.00 3.27
1519 1806 6.369340 CAGCATGTCCAATCTTAATTTTGCAA 59.631 34.615 0.00 0.00 0.00 4.08
1520 1807 6.592607 AGCATGTCCAATCTTAATTTTGCAAG 59.407 34.615 0.00 0.00 0.00 4.01
1522 1809 7.622672 GCATGTCCAATCTTAATTTTGCAAGTG 60.623 37.037 0.00 0.00 0.00 3.16
1525 1812 8.149647 TGTCCAATCTTAATTTTGCAAGTGATT 58.850 29.630 0.00 4.78 0.00 2.57
1526 1813 8.992073 GTCCAATCTTAATTTTGCAAGTGATTT 58.008 29.630 0.00 0.00 0.00 2.17
1527 1814 9.206870 TCCAATCTTAATTTTGCAAGTGATTTC 57.793 29.630 0.00 0.00 0.00 2.17
1528 1815 8.991026 CCAATCTTAATTTTGCAAGTGATTTCA 58.009 29.630 0.00 0.00 0.00 2.69
1536 1823 7.846644 TTTTGCAAGTGATTTCAAATGAACT 57.153 28.000 0.00 0.00 33.13 3.01
1537 1824 8.939201 TTTTGCAAGTGATTTCAAATGAACTA 57.061 26.923 0.00 0.00 33.13 2.24
1539 1826 8.746922 TTGCAAGTGATTTCAAATGAACTATC 57.253 30.769 0.00 0.00 33.13 2.08
1540 1827 7.884257 TGCAAGTGATTTCAAATGAACTATCA 58.116 30.769 6.47 6.47 40.57 2.15
1543 1830 9.850628 CAAGTGATTTCAAATGAACTATCACAT 57.149 29.630 26.80 19.29 45.53 3.21
1552 1839 8.417884 TCAAATGAACTATCACATACGGATGTA 58.582 33.333 14.23 2.61 44.82 2.29
1583 1870 9.774742 GACATATTTTAAAGTGTGGATTCACTC 57.225 33.333 5.55 1.32 46.25 3.51
1584 1871 9.295825 ACATATTTTAAAGTGTGGATTCACTCA 57.704 29.630 5.55 0.00 46.25 3.41
1589 1876 8.870160 TTTAAAGTGTGGATTCACTCATTTTG 57.130 30.769 5.55 0.00 46.25 2.44
1590 1877 4.510038 AGTGTGGATTCACTCATTTTGC 57.490 40.909 5.55 0.00 44.07 3.68
1591 1878 4.147321 AGTGTGGATTCACTCATTTTGCT 58.853 39.130 5.55 0.00 44.07 3.91
1592 1879 4.217118 AGTGTGGATTCACTCATTTTGCTC 59.783 41.667 5.55 0.00 44.07 4.26
1593 1880 4.217118 GTGTGGATTCACTCATTTTGCTCT 59.783 41.667 5.55 0.00 43.94 4.09
1594 1881 5.412594 GTGTGGATTCACTCATTTTGCTCTA 59.587 40.000 5.55 0.00 43.94 2.43
1595 1882 6.094603 GTGTGGATTCACTCATTTTGCTCTAT 59.905 38.462 5.55 0.00 43.94 1.98
1596 1883 7.280876 GTGTGGATTCACTCATTTTGCTCTATA 59.719 37.037 5.55 0.00 43.94 1.31
1597 1884 7.994911 TGTGGATTCACTCATTTTGCTCTATAT 59.005 33.333 5.55 0.00 43.94 0.86
1598 1885 8.288208 GTGGATTCACTCATTTTGCTCTATATG 58.712 37.037 0.00 0.00 40.58 1.78
1599 1886 7.994911 TGGATTCACTCATTTTGCTCTATATGT 59.005 33.333 0.00 0.00 0.00 2.29
1600 1887 9.494271 GGATTCACTCATTTTGCTCTATATGTA 57.506 33.333 0.00 0.00 0.00 2.29
1603 1890 9.534565 TTCACTCATTTTGCTCTATATGTAGTC 57.465 33.333 0.00 0.00 0.00 2.59
1604 1891 8.695456 TCACTCATTTTGCTCTATATGTAGTCA 58.305 33.333 0.00 0.00 0.00 3.41
1605 1892 8.759641 CACTCATTTTGCTCTATATGTAGTCAC 58.240 37.037 0.00 0.00 0.00 3.67
1606 1893 8.700051 ACTCATTTTGCTCTATATGTAGTCACT 58.300 33.333 0.00 0.00 0.00 3.41
1607 1894 9.539825 CTCATTTTGCTCTATATGTAGTCACTT 57.460 33.333 0.00 0.00 0.00 3.16
1611 1898 9.803315 TTTTGCTCTATATGTAGTCACTTAGTG 57.197 33.333 5.94 5.94 34.45 2.74
1612 1899 8.747538 TTGCTCTATATGTAGTCACTTAGTGA 57.252 34.615 11.42 11.42 40.50 3.41
1613 1900 8.747538 TGCTCTATATGTAGTCACTTAGTGAA 57.252 34.615 17.25 1.50 44.49 3.18
1614 1901 9.185680 TGCTCTATATGTAGTCACTTAGTGAAA 57.814 33.333 17.25 5.62 44.49 2.69
1621 1908 8.902540 ATGTAGTCACTTAGTGAAATGACAAA 57.097 30.769 17.25 0.00 44.49 2.83
1622 1909 8.902540 TGTAGTCACTTAGTGAAATGACAAAT 57.097 30.769 17.25 0.00 44.49 2.32
1623 1910 9.990360 TGTAGTCACTTAGTGAAATGACAAATA 57.010 29.630 17.25 0.00 44.49 1.40
1641 1928 9.667107 TGACAAATATTTAAGATCGAAAGGAGT 57.333 29.630 0.00 0.00 0.00 3.85
1657 1944 9.932207 TCGAAAGGAGTAGTATGTAAAAATGAA 57.068 29.630 0.00 0.00 0.00 2.57
1681 1968 9.869844 GAAATGACAAATATTTACGATCAGAGG 57.130 33.333 0.00 0.00 0.00 3.69
1682 1969 7.969536 ATGACAAATATTTACGATCAGAGGG 57.030 36.000 0.00 0.00 0.00 4.30
1683 1970 7.119709 TGACAAATATTTACGATCAGAGGGA 57.880 36.000 0.00 0.00 0.00 4.20
1684 1971 7.210174 TGACAAATATTTACGATCAGAGGGAG 58.790 38.462 0.00 0.00 0.00 4.30
1685 1972 7.125792 ACAAATATTTACGATCAGAGGGAGT 57.874 36.000 0.00 0.00 0.00 3.85
1686 1973 8.246430 ACAAATATTTACGATCAGAGGGAGTA 57.754 34.615 0.00 0.00 0.00 2.59
1687 1974 8.361139 ACAAATATTTACGATCAGAGGGAGTAG 58.639 37.037 0.00 0.00 0.00 2.57
1688 1975 8.361139 CAAATATTTACGATCAGAGGGAGTAGT 58.639 37.037 0.00 0.00 0.00 2.73
1689 1976 9.584008 AAATATTTACGATCAGAGGGAGTAGTA 57.416 33.333 0.00 0.00 0.00 1.82
1690 1977 9.756571 AATATTTACGATCAGAGGGAGTAGTAT 57.243 33.333 0.00 0.00 0.00 2.12
1691 1978 6.879276 TTTACGATCAGAGGGAGTAGTATG 57.121 41.667 0.00 0.00 0.00 2.39
1692 1979 4.440826 ACGATCAGAGGGAGTAGTATGT 57.559 45.455 0.00 0.00 0.00 2.29
1698 1985 8.361139 CGATCAGAGGGAGTAGTATGTAAAATT 58.639 37.037 0.00 0.00 0.00 1.82
1723 2010 4.067192 TCACTAGTACGTAGTTGCTGACA 58.933 43.478 8.48 0.00 37.78 3.58
1824 2111 0.250467 ATGACCGTGTTCAGCAAGCT 60.250 50.000 0.00 0.00 0.00 3.74
1870 2157 2.219458 TCGTATGACTCGACTGATCCC 58.781 52.381 0.00 0.00 32.30 3.85
2010 2302 7.321717 AGCCTATTGTCTTACATGGTATCAT 57.678 36.000 0.00 0.00 0.00 2.45
2912 3213 2.259439 AAGAGTCTCGCCGACACGT 61.259 57.895 0.00 0.00 45.32 4.49
3087 3388 1.169577 ACTGAGCAACGAGTCGAGAT 58.830 50.000 21.50 9.99 0.00 2.75
3571 3873 4.625028 TCTCTCATATTGGTCAAGCATCG 58.375 43.478 0.00 0.00 0.00 3.84
3797 4099 4.087892 AGCATCCTGGCGTCGCTT 62.088 61.111 18.11 0.00 39.27 4.68
4156 4459 7.721286 TGTGTTTGACATTTTTGTTCAGTTT 57.279 28.000 0.00 0.00 0.00 2.66
4295 4598 3.054875 AGCATGTCCACATACACATCAGT 60.055 43.478 0.00 0.00 34.26 3.41
4345 4648 4.065088 GTCACATTGTTGAAGCTGGTCTA 58.935 43.478 0.00 0.00 0.00 2.59
4377 4680 1.811965 CCATGCATCTGTTCCGTTTCA 59.188 47.619 0.00 0.00 0.00 2.69
5694 6000 1.495584 GCTCGTGGTTTTCGACAGCA 61.496 55.000 0.00 0.00 35.10 4.41
5719 6025 5.808366 TTGGACTTGACTATGAAGACACT 57.192 39.130 0.00 0.00 0.00 3.55
5888 6194 0.609406 CTCTGATCCGGATCGCCCTA 60.609 60.000 33.49 18.44 40.63 3.53
6261 6567 2.014068 GCGAGCTGGGATGCTTAAGTT 61.014 52.381 4.02 0.00 44.17 2.66
6418 6724 3.945285 ACATTTCCTATGCTGTTAACCGG 59.055 43.478 0.00 0.00 0.00 5.28
6806 7112 5.068591 TGTGATAACATCGGTGCTACATACT 59.931 40.000 0.00 0.00 0.00 2.12
7155 7466 1.940613 GCCTATTGTCTTACAAGCCGG 59.059 52.381 0.00 0.00 41.94 6.13
7216 7530 6.553953 TCTACCTAGTACAATTTCCATGCA 57.446 37.500 0.00 0.00 0.00 3.96
7217 7531 6.582636 TCTACCTAGTACAATTTCCATGCAG 58.417 40.000 0.00 0.00 0.00 4.41
7236 7550 4.168760 GCAGATTTGCTGTCCACAATAAC 58.831 43.478 0.00 0.00 46.95 1.89
7448 7800 0.594284 GCACCTACTACGCGGATGTC 60.594 60.000 12.47 0.00 0.00 3.06
7468 7820 1.150986 CCCCTACTCCTCCCATCATCT 59.849 57.143 0.00 0.00 0.00 2.90
7499 7858 4.654915 TGTTGGCATTCTTGATCTCAGAA 58.345 39.130 9.53 9.53 0.00 3.02
7500 7859 5.072055 TGTTGGCATTCTTGATCTCAGAAA 58.928 37.500 10.76 0.00 0.00 2.52
7501 7860 5.713389 TGTTGGCATTCTTGATCTCAGAAAT 59.287 36.000 10.76 0.62 0.00 2.17
7502 7861 6.209986 TGTTGGCATTCTTGATCTCAGAAATT 59.790 34.615 10.76 0.00 0.00 1.82
7564 8141 4.721132 CTTGCTACTAGCTAGTACTCCCT 58.279 47.826 26.36 6.29 42.97 4.20
7565 8142 4.354893 TGCTACTAGCTAGTACTCCCTC 57.645 50.000 26.36 13.03 42.97 4.30
7566 8143 3.975312 TGCTACTAGCTAGTACTCCCTCT 59.025 47.826 26.36 4.88 42.97 3.69
7567 8144 4.202377 TGCTACTAGCTAGTACTCCCTCTG 60.202 50.000 26.36 16.20 42.97 3.35
7568 8145 4.202388 GCTACTAGCTAGTACTCCCTCTGT 60.202 50.000 26.36 4.50 38.45 3.41
7569 8146 4.426736 ACTAGCTAGTACTCCCTCTGTC 57.573 50.000 24.97 0.00 34.13 3.51
7570 8147 2.740506 AGCTAGTACTCCCTCTGTCC 57.259 55.000 0.00 0.00 0.00 4.02
7571 8148 1.215924 AGCTAGTACTCCCTCTGTCCC 59.784 57.143 0.00 0.00 0.00 4.46
7572 8149 1.063867 GCTAGTACTCCCTCTGTCCCA 60.064 57.143 0.00 0.00 0.00 4.37
7573 8150 2.425102 GCTAGTACTCCCTCTGTCCCAT 60.425 54.545 0.00 0.00 0.00 4.00
7574 8151 3.181431 GCTAGTACTCCCTCTGTCCCATA 60.181 52.174 0.00 0.00 0.00 2.74
7575 8152 4.691935 GCTAGTACTCCCTCTGTCCCATAA 60.692 50.000 0.00 0.00 0.00 1.90
7576 8153 4.561254 AGTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
7577 8154 5.681494 AGTACTCCCTCTGTCCCATAATA 57.319 43.478 0.00 0.00 0.00 0.98
7578 8155 5.395611 AGTACTCCCTCTGTCCCATAATAC 58.604 45.833 0.00 0.00 0.00 1.89
7579 8156 4.280789 ACTCCCTCTGTCCCATAATACA 57.719 45.455 0.00 0.00 0.00 2.29
7580 8157 4.631234 ACTCCCTCTGTCCCATAATACAA 58.369 43.478 0.00 0.00 0.00 2.41
7581 8158 4.656112 ACTCCCTCTGTCCCATAATACAAG 59.344 45.833 0.00 0.00 0.00 3.16
7582 8159 4.890988 TCCCTCTGTCCCATAATACAAGA 58.109 43.478 0.00 0.00 0.00 3.02
7583 8160 5.285401 TCCCTCTGTCCCATAATACAAGAA 58.715 41.667 0.00 0.00 0.00 2.52
7584 8161 5.130477 TCCCTCTGTCCCATAATACAAGAAC 59.870 44.000 0.00 0.00 0.00 3.01
7585 8162 5.050490 CCTCTGTCCCATAATACAAGAACG 58.950 45.833 0.00 0.00 0.00 3.95
7586 8163 5.395324 CCTCTGTCCCATAATACAAGAACGT 60.395 44.000 0.00 0.00 0.00 3.99
7587 8164 6.045072 TCTGTCCCATAATACAAGAACGTT 57.955 37.500 0.00 0.00 0.00 3.99
7588 8165 6.469410 TCTGTCCCATAATACAAGAACGTTT 58.531 36.000 0.46 0.00 0.00 3.60
7589 8166 6.938030 TCTGTCCCATAATACAAGAACGTTTT 59.062 34.615 0.46 0.00 0.00 2.43
7590 8167 7.446013 TCTGTCCCATAATACAAGAACGTTTTT 59.554 33.333 0.46 0.00 0.00 1.94
7618 8195 7.998753 ACTAGTGTAGTGTAGTGTCAAAAAC 57.001 36.000 0.00 0.00 37.69 2.43
7619 8196 7.549839 ACTAGTGTAGTGTAGTGTCAAAAACA 58.450 34.615 0.00 0.00 37.69 2.83
7620 8197 8.202137 ACTAGTGTAGTGTAGTGTCAAAAACAT 58.798 33.333 0.00 0.00 37.69 2.71
7621 8198 7.859325 AGTGTAGTGTAGTGTCAAAAACATT 57.141 32.000 0.00 0.00 40.80 2.71
7622 8199 7.916552 AGTGTAGTGTAGTGTCAAAAACATTC 58.083 34.615 0.00 0.00 40.80 2.67
7623 8200 7.769044 AGTGTAGTGTAGTGTCAAAAACATTCT 59.231 33.333 0.00 0.00 40.80 2.40
7624 8201 8.395633 GTGTAGTGTAGTGTCAAAAACATTCTT 58.604 33.333 0.00 0.00 40.80 2.52
7625 8202 9.602568 TGTAGTGTAGTGTCAAAAACATTCTTA 57.397 29.630 0.00 0.00 40.80 2.10
7638 8215 9.677567 CAAAAACATTCTTATATTATGGGACGG 57.322 33.333 0.00 0.00 0.00 4.79
7639 8216 7.996098 AAACATTCTTATATTATGGGACGGG 57.004 36.000 0.00 0.00 0.00 5.28
7640 8217 6.062258 ACATTCTTATATTATGGGACGGGG 57.938 41.667 0.00 0.00 0.00 5.73
7641 8218 5.045140 ACATTCTTATATTATGGGACGGGGG 60.045 44.000 0.00 0.00 0.00 5.40
7660 8237 5.993748 GGGGGTAGTTTTGAATGAAATGA 57.006 39.130 0.00 0.00 0.00 2.57
7661 8238 6.544928 GGGGGTAGTTTTGAATGAAATGAT 57.455 37.500 0.00 0.00 0.00 2.45
7662 8239 6.340522 GGGGGTAGTTTTGAATGAAATGATG 58.659 40.000 0.00 0.00 0.00 3.07
7663 8240 6.154363 GGGGGTAGTTTTGAATGAAATGATGA 59.846 38.462 0.00 0.00 0.00 2.92
7721 8313 3.014304 ACTTGGAATGCATGAGCTCAT 57.986 42.857 23.75 23.75 42.74 2.90
7722 8314 4.160642 ACTTGGAATGCATGAGCTCATA 57.839 40.909 28.27 15.09 42.74 2.15
7723 8315 4.726583 ACTTGGAATGCATGAGCTCATAT 58.273 39.130 28.27 16.74 42.74 1.78
7727 8319 8.105197 ACTTGGAATGCATGAGCTCATATTATA 58.895 33.333 28.27 14.14 42.74 0.98
7752 8419 5.738118 ATTTTGCACCATCAAAAACAGTG 57.262 34.783 5.87 0.00 45.50 3.66
7794 8465 2.830923 ACTGAATGTGGAGAGAGGTCTG 59.169 50.000 0.00 0.00 30.97 3.51
7795 8466 2.830923 CTGAATGTGGAGAGAGGTCTGT 59.169 50.000 0.00 0.00 30.97 3.41
7796 8467 3.242867 TGAATGTGGAGAGAGGTCTGTT 58.757 45.455 0.00 0.00 30.97 3.16
7797 8468 4.416516 TGAATGTGGAGAGAGGTCTGTTA 58.583 43.478 0.00 0.00 30.97 2.41
7798 8469 4.464244 TGAATGTGGAGAGAGGTCTGTTAG 59.536 45.833 0.00 0.00 30.97 2.34
7799 8470 3.527507 TGTGGAGAGAGGTCTGTTAGT 57.472 47.619 0.00 0.00 30.97 2.24
7800 8471 3.845860 TGTGGAGAGAGGTCTGTTAGTT 58.154 45.455 0.00 0.00 30.97 2.24
7801 8472 4.994282 TGTGGAGAGAGGTCTGTTAGTTA 58.006 43.478 0.00 0.00 30.97 2.24
7802 8473 4.765856 TGTGGAGAGAGGTCTGTTAGTTAC 59.234 45.833 0.00 0.00 30.97 2.50
7803 8474 4.765856 GTGGAGAGAGGTCTGTTAGTTACA 59.234 45.833 0.00 0.00 30.97 2.41
7812 8483 2.736144 TGTTAGTTACAGTGGCGGAG 57.264 50.000 0.00 0.00 31.68 4.63
7813 8484 2.241160 TGTTAGTTACAGTGGCGGAGA 58.759 47.619 0.00 0.00 31.68 3.71
7814 8485 2.029649 TGTTAGTTACAGTGGCGGAGAC 60.030 50.000 0.00 0.00 31.68 3.36
7815 8486 4.561979 TGTTAGTTACAGTGGCGGAGACA 61.562 47.826 0.00 0.00 35.85 3.41
7848 8519 4.109656 CCCTGGCCCTCCCTACCT 62.110 72.222 0.00 0.00 0.00 3.08
7849 8520 2.770048 CCTGGCCCTCCCTACCTG 60.770 72.222 0.00 0.00 0.00 4.00
7850 8521 2.368594 CTGGCCCTCCCTACCTGA 59.631 66.667 0.00 0.00 0.00 3.86
7851 8522 1.074167 CTGGCCCTCCCTACCTGAT 60.074 63.158 0.00 0.00 0.00 2.90
7852 8523 0.695803 CTGGCCCTCCCTACCTGATT 60.696 60.000 0.00 0.00 0.00 2.57
7853 8524 0.253630 TGGCCCTCCCTACCTGATTT 60.254 55.000 0.00 0.00 0.00 2.17
7854 8525 0.183731 GGCCCTCCCTACCTGATTTG 59.816 60.000 0.00 0.00 0.00 2.32
7855 8526 0.466372 GCCCTCCCTACCTGATTTGC 60.466 60.000 0.00 0.00 0.00 3.68
7856 8527 1.216990 CCCTCCCTACCTGATTTGCT 58.783 55.000 0.00 0.00 0.00 3.91
7857 8528 2.408565 CCCTCCCTACCTGATTTGCTA 58.591 52.381 0.00 0.00 0.00 3.49
7858 8529 2.104963 CCCTCCCTACCTGATTTGCTAC 59.895 54.545 0.00 0.00 0.00 3.58
7859 8530 2.224066 CCTCCCTACCTGATTTGCTACG 60.224 54.545 0.00 0.00 0.00 3.51
7860 8531 2.693591 CTCCCTACCTGATTTGCTACGA 59.306 50.000 0.00 0.00 0.00 3.43
7861 8532 3.101437 TCCCTACCTGATTTGCTACGAA 58.899 45.455 0.00 0.00 0.00 3.85
7862 8533 3.709653 TCCCTACCTGATTTGCTACGAAT 59.290 43.478 0.00 0.00 0.00 3.34
7863 8534 4.897076 TCCCTACCTGATTTGCTACGAATA 59.103 41.667 0.00 0.00 0.00 1.75
7864 8535 5.542635 TCCCTACCTGATTTGCTACGAATAT 59.457 40.000 0.00 0.00 0.00 1.28
7865 8536 6.722590 TCCCTACCTGATTTGCTACGAATATA 59.277 38.462 0.00 0.00 0.00 0.86
7866 8537 7.036220 CCCTACCTGATTTGCTACGAATATAG 58.964 42.308 0.00 0.00 0.00 1.31
7867 8538 6.531948 CCTACCTGATTTGCTACGAATATAGC 59.468 42.308 0.00 0.00 46.58 2.97
7877 8548 6.771188 GCTACGAATATAGCAATGAACAGT 57.229 37.500 0.00 0.00 45.83 3.55
7878 8549 6.584954 GCTACGAATATAGCAATGAACAGTG 58.415 40.000 0.00 0.00 45.83 3.66
7892 8563 8.578308 CAATGAACAGTGCAAAAATTAGAGAA 57.422 30.769 0.00 0.00 0.00 2.87
7893 8564 9.199982 CAATGAACAGTGCAAAAATTAGAGAAT 57.800 29.630 0.00 0.00 0.00 2.40
7918 8589 6.867662 ATACATGCATTAGAGTAGTTTGGC 57.132 37.500 0.00 0.00 0.00 4.52
7919 8590 3.947834 ACATGCATTAGAGTAGTTTGGCC 59.052 43.478 0.00 0.00 0.00 5.36
7920 8591 2.999331 TGCATTAGAGTAGTTTGGCCC 58.001 47.619 0.00 0.00 0.00 5.80
7921 8592 2.298610 GCATTAGAGTAGTTTGGCCCC 58.701 52.381 0.00 0.00 0.00 5.80
7922 8593 2.092375 GCATTAGAGTAGTTTGGCCCCT 60.092 50.000 0.00 0.00 0.00 4.79
7923 8594 3.545703 CATTAGAGTAGTTTGGCCCCTG 58.454 50.000 0.00 0.00 0.00 4.45
7924 8595 2.337359 TAGAGTAGTTTGGCCCCTGT 57.663 50.000 0.00 0.00 0.00 4.00
7925 8596 0.984995 AGAGTAGTTTGGCCCCTGTC 59.015 55.000 0.00 0.00 0.00 3.51
7926 8597 0.690762 GAGTAGTTTGGCCCCTGTCA 59.309 55.000 0.00 0.00 0.00 3.58
7927 8598 1.282157 GAGTAGTTTGGCCCCTGTCAT 59.718 52.381 0.00 0.00 0.00 3.06
7928 8599 1.282157 AGTAGTTTGGCCCCTGTCATC 59.718 52.381 0.00 0.00 0.00 2.92
7929 8600 0.623723 TAGTTTGGCCCCTGTCATCC 59.376 55.000 0.00 0.00 0.00 3.51
7930 8601 1.076549 GTTTGGCCCCTGTCATCCA 59.923 57.895 0.00 0.00 0.00 3.41
7931 8602 0.541764 GTTTGGCCCCTGTCATCCAA 60.542 55.000 0.00 0.00 36.86 3.53
7932 8603 0.189574 TTTGGCCCCTGTCATCCAAA 59.810 50.000 0.00 1.57 43.80 3.28
7933 8604 0.251742 TTGGCCCCTGTCATCCAAAG 60.252 55.000 0.00 0.00 35.83 2.77
7934 8605 1.384191 GGCCCCTGTCATCCAAAGT 59.616 57.895 0.00 0.00 0.00 2.66
7935 8606 0.251787 GGCCCCTGTCATCCAAAGTT 60.252 55.000 0.00 0.00 0.00 2.66
7936 8607 1.632589 GCCCCTGTCATCCAAAGTTT 58.367 50.000 0.00 0.00 0.00 2.66
7937 8608 1.273327 GCCCCTGTCATCCAAAGTTTG 59.727 52.381 8.73 8.73 0.00 2.93
7938 8609 2.597455 CCCCTGTCATCCAAAGTTTGT 58.403 47.619 14.36 0.00 0.00 2.83
7939 8610 2.297033 CCCCTGTCATCCAAAGTTTGTG 59.703 50.000 14.36 7.29 0.00 3.33
7940 8611 2.958355 CCCTGTCATCCAAAGTTTGTGT 59.042 45.455 14.36 0.00 0.00 3.72
7941 8612 4.141287 CCCTGTCATCCAAAGTTTGTGTA 58.859 43.478 14.36 0.41 0.00 2.90
7942 8613 4.582656 CCCTGTCATCCAAAGTTTGTGTAA 59.417 41.667 14.36 0.00 0.00 2.41
7943 8614 5.243730 CCCTGTCATCCAAAGTTTGTGTAAT 59.756 40.000 14.36 0.44 0.00 1.89
7944 8615 6.239289 CCCTGTCATCCAAAGTTTGTGTAATT 60.239 38.462 14.36 0.00 0.00 1.40
7945 8616 7.209475 CCTGTCATCCAAAGTTTGTGTAATTT 58.791 34.615 14.36 0.00 0.00 1.82
7946 8617 7.169645 CCTGTCATCCAAAGTTTGTGTAATTTG 59.830 37.037 14.36 0.00 33.45 2.32
7947 8618 6.478344 TGTCATCCAAAGTTTGTGTAATTTGC 59.522 34.615 14.36 0.00 32.54 3.68
7948 8619 5.988561 TCATCCAAAGTTTGTGTAATTTGCC 59.011 36.000 14.36 0.00 32.54 4.52
7949 8620 4.698575 TCCAAAGTTTGTGTAATTTGCCC 58.301 39.130 14.36 0.00 32.54 5.36
7950 8621 3.812609 CCAAAGTTTGTGTAATTTGCCCC 59.187 43.478 14.36 0.00 32.54 5.80
7951 8622 4.444164 CCAAAGTTTGTGTAATTTGCCCCT 60.444 41.667 14.36 0.00 32.54 4.79
7952 8623 4.600692 AAGTTTGTGTAATTTGCCCCTC 57.399 40.909 0.00 0.00 0.00 4.30
7953 8624 3.844640 AGTTTGTGTAATTTGCCCCTCT 58.155 40.909 0.00 0.00 0.00 3.69
7954 8625 4.993028 AGTTTGTGTAATTTGCCCCTCTA 58.007 39.130 0.00 0.00 0.00 2.43
7955 8626 5.390387 AGTTTGTGTAATTTGCCCCTCTAA 58.610 37.500 0.00 0.00 0.00 2.10
7956 8627 6.016555 AGTTTGTGTAATTTGCCCCTCTAAT 58.983 36.000 0.00 0.00 0.00 1.73
7957 8628 6.152831 AGTTTGTGTAATTTGCCCCTCTAATC 59.847 38.462 0.00 0.00 0.00 1.75
7958 8629 5.450818 TGTGTAATTTGCCCCTCTAATCT 57.549 39.130 0.00 0.00 0.00 2.40
7959 8630 5.826643 TGTGTAATTTGCCCCTCTAATCTT 58.173 37.500 0.00 0.00 0.00 2.40
7960 8631 6.252995 TGTGTAATTTGCCCCTCTAATCTTT 58.747 36.000 0.00 0.00 0.00 2.52
7961 8632 7.406916 TGTGTAATTTGCCCCTCTAATCTTTA 58.593 34.615 0.00 0.00 0.00 1.85
7962 8633 7.891183 TGTGTAATTTGCCCCTCTAATCTTTAA 59.109 33.333 0.00 0.00 0.00 1.52
7963 8634 8.914011 GTGTAATTTGCCCCTCTAATCTTTAAT 58.086 33.333 0.00 0.00 0.00 1.40
7964 8635 9.487442 TGTAATTTGCCCCTCTAATCTTTAATT 57.513 29.630 0.00 0.00 0.00 1.40
7965 8636 9.967346 GTAATTTGCCCCTCTAATCTTTAATTC 57.033 33.333 0.00 0.00 0.00 2.17
7966 8637 7.603180 ATTTGCCCCTCTAATCTTTAATTCC 57.397 36.000 0.00 0.00 0.00 3.01
7967 8638 5.994416 TGCCCCTCTAATCTTTAATTCCT 57.006 39.130 0.00 0.00 0.00 3.36
7968 8639 7.460214 TTGCCCCTCTAATCTTTAATTCCTA 57.540 36.000 0.00 0.00 0.00 2.94
7969 8640 7.079451 TGCCCCTCTAATCTTTAATTCCTAG 57.921 40.000 0.00 0.00 0.00 3.02
7970 8641 5.941058 GCCCCTCTAATCTTTAATTCCTAGC 59.059 44.000 0.00 0.00 0.00 3.42
7971 8642 6.240031 GCCCCTCTAATCTTTAATTCCTAGCT 60.240 42.308 0.00 0.00 0.00 3.32
7972 8643 7.390823 CCCCTCTAATCTTTAATTCCTAGCTC 58.609 42.308 0.00 0.00 0.00 4.09
7973 8644 7.390823 CCCTCTAATCTTTAATTCCTAGCTCC 58.609 42.308 0.00 0.00 0.00 4.70
7974 8645 7.093992 CCTCTAATCTTTAATTCCTAGCTCCG 58.906 42.308 0.00 0.00 0.00 4.63
7975 8646 6.456501 TCTAATCTTTAATTCCTAGCTCCGC 58.543 40.000 0.00 0.00 0.00 5.54
7976 8647 3.470645 TCTTTAATTCCTAGCTCCGCC 57.529 47.619 0.00 0.00 0.00 6.13
7977 8648 2.769663 TCTTTAATTCCTAGCTCCGCCA 59.230 45.455 0.00 0.00 0.00 5.69
7978 8649 2.614829 TTAATTCCTAGCTCCGCCAC 57.385 50.000 0.00 0.00 0.00 5.01
7979 8650 1.789523 TAATTCCTAGCTCCGCCACT 58.210 50.000 0.00 0.00 0.00 4.00
7980 8651 0.179000 AATTCCTAGCTCCGCCACTG 59.821 55.000 0.00 0.00 0.00 3.66
8107 9168 1.602605 GCACACGGTTTAAGCCCCT 60.603 57.895 2.36 0.00 0.00 4.79
8132 9199 1.083489 TTTTAGAAGCGCGGGATGTG 58.917 50.000 8.83 0.00 0.00 3.21
8184 9306 1.600663 CGACACTAGCCGTCCATGATC 60.601 57.143 0.00 0.00 0.00 2.92
8185 9307 1.409064 GACACTAGCCGTCCATGATCA 59.591 52.381 0.00 0.00 0.00 2.92
8186 9308 2.036475 GACACTAGCCGTCCATGATCAT 59.964 50.000 1.18 1.18 0.00 2.45
8190 9312 2.180432 AGCCGTCCATGATCATGATG 57.820 50.000 32.71 22.51 41.20 3.07
8191 9313 1.419012 AGCCGTCCATGATCATGATGT 59.581 47.619 32.71 11.17 41.20 3.06
8193 9315 3.071457 AGCCGTCCATGATCATGATGTTA 59.929 43.478 32.71 12.50 41.20 2.41
8198 9320 7.148188 GCCGTCCATGATCATGATGTTAATTAT 60.148 37.037 32.71 0.00 41.20 1.28
8199 9321 8.393366 CCGTCCATGATCATGATGTTAATTATC 58.607 37.037 32.71 10.24 41.20 1.75
8200 9322 9.159364 CGTCCATGATCATGATGTTAATTATCT 57.841 33.333 32.71 0.00 41.20 1.98
8202 9324 9.457436 TCCATGATCATGATGTTAATTATCTGG 57.543 33.333 32.71 14.61 41.20 3.86
8470 10512 0.865769 AGAATCGTTTGCCGTGTGAC 59.134 50.000 0.00 0.00 37.94 3.67
8607 10653 0.744414 GCTGTGTGTGTGTGTGGACT 60.744 55.000 0.00 0.00 0.00 3.85
8651 10698 5.467735 TCTTTGTCAATGCATAGATCATCCG 59.532 40.000 0.00 0.00 0.00 4.18
8716 10763 4.314121 TGGTTAAAAATGTTGCATGCTCC 58.686 39.130 20.33 9.69 0.00 4.70
8984 11036 9.558648 TGTCCTTTCGACTTTTAAAACTTTTAC 57.441 29.630 0.00 0.00 42.49 2.01
9124 11193 6.710744 ACCGCCTCAAATGGTTAGATATTAAG 59.289 38.462 0.00 0.00 29.87 1.85
9355 11428 9.726034 ACGTAATTAATTAAGTAAACGTTCACG 57.274 29.630 20.72 14.50 37.94 4.35
9436 11510 3.726291 GAGGAGTCTCTGCCAATACTC 57.274 52.381 0.00 0.00 38.08 2.59
9437 11511 3.295973 GAGGAGTCTCTGCCAATACTCT 58.704 50.000 0.00 0.00 38.69 3.24
9438 11512 3.704061 GAGGAGTCTCTGCCAATACTCTT 59.296 47.826 0.00 0.00 38.69 2.85
9439 11513 4.100373 AGGAGTCTCTGCCAATACTCTTT 58.900 43.478 0.00 0.00 38.69 2.52
9440 11514 4.534103 AGGAGTCTCTGCCAATACTCTTTT 59.466 41.667 0.00 0.00 38.69 2.27
9441 11515 5.013599 AGGAGTCTCTGCCAATACTCTTTTT 59.986 40.000 0.00 0.00 38.69 1.94
9442 11516 5.123027 GGAGTCTCTGCCAATACTCTTTTTG 59.877 44.000 0.00 0.00 38.69 2.44
9443 11517 5.625150 AGTCTCTGCCAATACTCTTTTTGT 58.375 37.500 0.00 0.00 0.00 2.83
9444 11518 6.769512 AGTCTCTGCCAATACTCTTTTTGTA 58.230 36.000 0.00 0.00 0.00 2.41
9445 11519 6.876257 AGTCTCTGCCAATACTCTTTTTGTAG 59.124 38.462 0.00 0.00 0.00 2.74
9446 11520 6.092807 GTCTCTGCCAATACTCTTTTTGTAGG 59.907 42.308 0.00 0.00 0.00 3.18
9447 11521 4.700213 TCTGCCAATACTCTTTTTGTAGGC 59.300 41.667 0.00 0.00 39.95 3.93
9448 11522 4.402829 TGCCAATACTCTTTTTGTAGGCA 58.597 39.130 0.00 0.00 46.31 4.75
9449 11523 4.830046 TGCCAATACTCTTTTTGTAGGCAA 59.170 37.500 0.00 0.00 45.60 4.52
9450 11524 5.161358 GCCAATACTCTTTTTGTAGGCAAC 58.839 41.667 0.00 0.00 39.35 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 43 6.670233 TGGATACGGTTGTTGTTATTGAAAC 58.330 36.000 0.00 0.00 42.51 2.78
54 59 6.072397 TGTTTTGGTTACTGAAATGGATACGG 60.072 38.462 0.00 0.00 42.51 4.02
68 73 4.312443 TCCGAGACTGATGTTTTGGTTAC 58.688 43.478 0.00 0.00 34.43 2.50
88 93 6.861065 ATGATATCGGTATTGTTGTGTTCC 57.139 37.500 0.00 0.00 0.00 3.62
279 290 9.712359 GGATATGTTCTAACCGTGTTTAAATTC 57.288 33.333 0.00 0.00 0.00 2.17
391 407 0.966920 TCAGTGAGAGGGAACGTTCC 59.033 55.000 34.71 34.71 46.82 3.62
424 440 2.820178 CTGGGTTTATTCCAGGCCTTT 58.180 47.619 0.00 0.00 45.95 3.11
452 468 3.880490 TCAAACTTACATTGGTGCTCGTT 59.120 39.130 0.00 0.00 0.00 3.85
453 469 3.472652 TCAAACTTACATTGGTGCTCGT 58.527 40.909 0.00 0.00 0.00 4.18
477 494 2.619849 CCACTGCCCATCAGAGTTCAAT 60.620 50.000 0.00 0.00 45.72 2.57
499 516 8.451748 GTTGGATGGTTAGAAAAAGAGTCATAC 58.548 37.037 0.00 0.00 0.00 2.39
502 519 5.768164 GGTTGGATGGTTAGAAAAAGAGTCA 59.232 40.000 0.00 0.00 0.00 3.41
503 520 5.183331 GGGTTGGATGGTTAGAAAAAGAGTC 59.817 44.000 0.00 0.00 0.00 3.36
527 544 3.243771 CCACCTATAGCGAACCAACCTAG 60.244 52.174 0.00 0.00 0.00 3.02
584 603 8.109634 ACCTCCACATCAGTTGTATATCTTTTT 58.890 33.333 0.00 0.00 36.57 1.94
585 604 7.554118 CACCTCCACATCAGTTGTATATCTTTT 59.446 37.037 0.00 0.00 36.57 2.27
586 605 7.050377 CACCTCCACATCAGTTGTATATCTTT 58.950 38.462 0.00 0.00 36.57 2.52
587 606 6.156949 ACACCTCCACATCAGTTGTATATCTT 59.843 38.462 0.00 0.00 36.57 2.40
588 607 5.663106 ACACCTCCACATCAGTTGTATATCT 59.337 40.000 0.00 0.00 36.57 1.98
589 608 5.755375 CACACCTCCACATCAGTTGTATATC 59.245 44.000 0.00 0.00 36.57 1.63
590 609 5.396772 CCACACCTCCACATCAGTTGTATAT 60.397 44.000 0.00 0.00 36.57 0.86
591 610 4.081142 CCACACCTCCACATCAGTTGTATA 60.081 45.833 0.00 0.00 36.57 1.47
592 611 3.307691 CCACACCTCCACATCAGTTGTAT 60.308 47.826 0.00 0.00 36.57 2.29
593 612 2.038426 CCACACCTCCACATCAGTTGTA 59.962 50.000 0.00 0.00 36.57 2.41
594 613 1.202806 CCACACCTCCACATCAGTTGT 60.203 52.381 0.00 0.00 39.91 3.32
595 614 1.072173 TCCACACCTCCACATCAGTTG 59.928 52.381 0.00 0.00 0.00 3.16
596 615 1.072331 GTCCACACCTCCACATCAGTT 59.928 52.381 0.00 0.00 0.00 3.16
597 616 0.687354 GTCCACACCTCCACATCAGT 59.313 55.000 0.00 0.00 0.00 3.41
598 617 0.036010 GGTCCACACCTCCACATCAG 60.036 60.000 0.00 0.00 40.00 2.90
599 618 2.066340 GGTCCACACCTCCACATCA 58.934 57.895 0.00 0.00 40.00 3.07
608 627 1.968540 GCAGCTGAAGGTCCACACC 60.969 63.158 20.43 0.00 44.19 4.16
609 628 1.227943 TGCAGCTGAAGGTCCACAC 60.228 57.895 20.43 0.00 0.00 3.82
645 676 3.726607 TGGTACGTAACGGTCAAACATT 58.273 40.909 6.07 0.00 0.00 2.71
679 711 1.196012 GAGAATTCCGGTGTCCCTCT 58.804 55.000 0.00 0.00 0.00 3.69
702 737 3.350833 GTCGGGACCAAACTAGAGTAGA 58.649 50.000 0.00 0.00 0.00 2.59
709 744 0.521291 CGTACGTCGGGACCAAACTA 59.479 55.000 7.22 0.00 35.71 2.24
710 745 1.286880 CGTACGTCGGGACCAAACT 59.713 57.895 7.22 0.00 35.71 2.66
711 746 2.374995 GCGTACGTCGGGACCAAAC 61.375 63.158 17.90 0.00 40.26 2.93
712 747 2.049248 GCGTACGTCGGGACCAAA 60.049 61.111 17.90 0.00 40.26 3.28
713 748 3.271706 CTGCGTACGTCGGGACCAA 62.272 63.158 17.90 0.00 40.26 3.67
714 749 3.740397 CTGCGTACGTCGGGACCA 61.740 66.667 17.90 3.21 40.26 4.02
715 750 4.487412 CCTGCGTACGTCGGGACC 62.487 72.222 24.50 5.90 40.26 4.46
716 751 3.741476 ACCTGCGTACGTCGGGAC 61.741 66.667 31.12 11.76 40.26 4.46
717 752 3.740397 CACCTGCGTACGTCGGGA 61.740 66.667 31.12 8.23 40.26 5.14
718 753 4.789075 CCACCTGCGTACGTCGGG 62.789 72.222 26.01 26.01 40.26 5.14
719 754 3.562779 AACCACCTGCGTACGTCGG 62.563 63.158 17.90 18.59 40.26 4.79
720 755 1.611592 GAAACCACCTGCGTACGTCG 61.612 60.000 17.90 8.00 43.12 5.12
721 756 1.287041 GGAAACCACCTGCGTACGTC 61.287 60.000 17.90 9.82 0.00 4.34
722 757 1.301165 GGAAACCACCTGCGTACGT 60.301 57.895 17.90 0.00 0.00 3.57
723 758 0.601841 AAGGAAACCACCTGCGTACG 60.602 55.000 11.84 11.84 40.49 3.67
769 827 1.957695 GGTTCGACGCCTTTCGGTT 60.958 57.895 0.00 0.00 43.86 4.44
841 924 0.108585 GACTGTGCAGGTGGGAAAGA 59.891 55.000 4.11 0.00 0.00 2.52
901 1094 0.690762 GAGGAGCAAAGGTGGTGGTA 59.309 55.000 0.00 0.00 35.00 3.25
913 1106 1.305633 CAGACTCAGGGGAGGAGCA 60.306 63.158 0.00 0.00 45.81 4.26
914 1107 0.398381 ATCAGACTCAGGGGAGGAGC 60.398 60.000 0.00 0.00 45.81 4.70
915 1108 1.217689 AGATCAGACTCAGGGGAGGAG 59.782 57.143 0.00 0.00 45.81 3.69
925 1118 5.360714 AGAAGGAACAGATGAGATCAGACTC 59.639 44.000 0.00 0.00 37.42 3.36
926 1119 5.271598 AGAAGGAACAGATGAGATCAGACT 58.728 41.667 0.00 0.00 0.00 3.24
941 1140 4.762765 GGAAGGAAGGAAGAAAGAAGGAAC 59.237 45.833 0.00 0.00 0.00 3.62
942 1141 4.505039 CGGAAGGAAGGAAGAAAGAAGGAA 60.505 45.833 0.00 0.00 0.00 3.36
987 1186 1.300697 GCCCATCGGTCGGTATCAC 60.301 63.158 0.00 0.00 0.00 3.06
988 1187 2.852180 CGCCCATCGGTCGGTATCA 61.852 63.158 0.00 0.00 33.78 2.15
989 1188 2.049433 CGCCCATCGGTCGGTATC 60.049 66.667 0.00 0.00 33.78 2.24
990 1189 4.295119 GCGCCCATCGGTCGGTAT 62.295 66.667 0.00 0.00 38.94 2.73
1229 1449 2.765807 ATGGAGGAGCGAGGGGTG 60.766 66.667 0.00 0.00 0.00 4.61
1266 1493 0.322366 TGCGGATCCACAGCATTTGA 60.322 50.000 13.41 0.00 43.90 2.69
1343 1616 3.305267 CCTCATTCCGTCTGCAGATAGAG 60.305 52.174 21.47 18.13 0.00 2.43
1344 1617 2.625314 CCTCATTCCGTCTGCAGATAGA 59.375 50.000 21.47 16.58 0.00 1.98
1357 1630 1.144936 CGTCCTCTGGCCTCATTCC 59.855 63.158 3.32 0.00 0.00 3.01
1412 1685 1.488705 CCCTGGGGCCGCATTATCTA 61.489 60.000 24.38 0.00 0.00 1.98
1520 1807 9.425893 CGTATGTGATAGTTCATTTGAAATCAC 57.574 33.333 20.88 20.88 44.51 3.06
1522 1809 8.826710 TCCGTATGTGATAGTTCATTTGAAATC 58.173 33.333 0.00 0.00 35.58 2.17
1525 1812 7.768582 ACATCCGTATGTGATAGTTCATTTGAA 59.231 33.333 0.00 0.00 44.79 2.69
1526 1813 7.272244 ACATCCGTATGTGATAGTTCATTTGA 58.728 34.615 0.00 0.00 44.79 2.69
1527 1814 7.482654 ACATCCGTATGTGATAGTTCATTTG 57.517 36.000 0.00 0.00 44.79 2.32
1570 1857 4.217118 AGAGCAAAATGAGTGAATCCACAC 59.783 41.667 0.00 0.00 45.54 3.82
1571 1858 4.401022 AGAGCAAAATGAGTGAATCCACA 58.599 39.130 0.00 0.00 45.54 4.17
1572 1859 6.690194 ATAGAGCAAAATGAGTGAATCCAC 57.310 37.500 0.00 0.00 43.50 4.02
1573 1860 7.994911 ACATATAGAGCAAAATGAGTGAATCCA 59.005 33.333 0.00 0.00 0.00 3.41
1574 1861 8.388484 ACATATAGAGCAAAATGAGTGAATCC 57.612 34.615 0.00 0.00 0.00 3.01
1577 1864 9.534565 GACTACATATAGAGCAAAATGAGTGAA 57.465 33.333 0.00 0.00 32.23 3.18
1578 1865 8.695456 TGACTACATATAGAGCAAAATGAGTGA 58.305 33.333 0.00 0.00 32.23 3.41
1579 1866 8.759641 GTGACTACATATAGAGCAAAATGAGTG 58.240 37.037 0.00 0.00 32.23 3.51
1580 1867 8.700051 AGTGACTACATATAGAGCAAAATGAGT 58.300 33.333 0.00 0.00 32.23 3.41
1581 1868 9.539825 AAGTGACTACATATAGAGCAAAATGAG 57.460 33.333 0.00 0.00 32.23 2.90
1585 1872 9.803315 CACTAAGTGACTACATATAGAGCAAAA 57.197 33.333 0.00 0.00 35.23 2.44
1586 1873 9.185680 TCACTAAGTGACTACATATAGAGCAAA 57.814 33.333 0.00 0.00 37.67 3.68
1587 1874 8.747538 TCACTAAGTGACTACATATAGAGCAA 57.252 34.615 0.00 0.00 37.67 3.91
1588 1875 8.747538 TTCACTAAGTGACTACATATAGAGCA 57.252 34.615 0.00 0.00 42.60 4.26
1595 1882 9.990360 TTTGTCATTTCACTAAGTGACTACATA 57.010 29.630 8.56 4.60 46.80 2.29
1596 1883 8.902540 TTTGTCATTTCACTAAGTGACTACAT 57.097 30.769 8.56 0.00 46.80 2.29
1597 1884 8.902540 ATTTGTCATTTCACTAAGTGACTACA 57.097 30.769 8.56 8.00 46.80 2.74
1615 1902 9.667107 ACTCCTTTCGATCTTAAATATTTGTCA 57.333 29.630 11.05 0.00 0.00 3.58
1631 1918 9.932207 TTCATTTTTACATACTACTCCTTTCGA 57.068 29.630 0.00 0.00 0.00 3.71
1655 1942 9.869844 CCTCTGATCGTAAATATTTGTCATTTC 57.130 33.333 11.05 1.85 0.00 2.17
1656 1943 8.840321 CCCTCTGATCGTAAATATTTGTCATTT 58.160 33.333 11.05 0.00 0.00 2.32
1657 1944 8.210946 TCCCTCTGATCGTAAATATTTGTCATT 58.789 33.333 11.05 0.00 0.00 2.57
1658 1945 7.735917 TCCCTCTGATCGTAAATATTTGTCAT 58.264 34.615 11.05 0.00 0.00 3.06
1659 1946 7.119709 TCCCTCTGATCGTAAATATTTGTCA 57.880 36.000 11.05 8.54 0.00 3.58
1660 1947 7.210873 ACTCCCTCTGATCGTAAATATTTGTC 58.789 38.462 11.05 3.49 0.00 3.18
1661 1948 7.125792 ACTCCCTCTGATCGTAAATATTTGT 57.874 36.000 11.05 0.00 0.00 2.83
1662 1949 8.361139 ACTACTCCCTCTGATCGTAAATATTTG 58.639 37.037 11.05 0.00 0.00 2.32
1663 1950 8.480133 ACTACTCCCTCTGATCGTAAATATTT 57.520 34.615 5.89 5.89 0.00 1.40
1664 1951 9.756571 ATACTACTCCCTCTGATCGTAAATATT 57.243 33.333 0.00 0.00 0.00 1.28
1665 1952 9.179909 CATACTACTCCCTCTGATCGTAAATAT 57.820 37.037 0.00 0.00 0.00 1.28
1666 1953 8.162085 ACATACTACTCCCTCTGATCGTAAATA 58.838 37.037 0.00 0.00 0.00 1.40
1667 1954 7.005296 ACATACTACTCCCTCTGATCGTAAAT 58.995 38.462 0.00 0.00 0.00 1.40
1668 1955 6.363065 ACATACTACTCCCTCTGATCGTAAA 58.637 40.000 0.00 0.00 0.00 2.01
1669 1956 5.938279 ACATACTACTCCCTCTGATCGTAA 58.062 41.667 0.00 0.00 0.00 3.18
1670 1957 5.563876 ACATACTACTCCCTCTGATCGTA 57.436 43.478 0.00 0.00 0.00 3.43
1671 1958 4.440826 ACATACTACTCCCTCTGATCGT 57.559 45.455 0.00 0.00 0.00 3.73
1672 1959 6.879276 TTTACATACTACTCCCTCTGATCG 57.121 41.667 0.00 0.00 0.00 3.69
1698 1985 6.372381 TGTCAGCAACTACGTACTAGTGATTA 59.628 38.462 5.39 0.00 35.70 1.75
1723 2010 7.775120 TCTGTGAAGAAGCAAGAAAAAGAAAT 58.225 30.769 0.00 0.00 0.00 2.17
1870 2157 3.251245 AGTCTAACACGGCTAGATCATCG 59.749 47.826 0.00 0.00 0.00 3.84
1877 2164 6.558009 TGTAAATACAGTCTAACACGGCTAG 58.442 40.000 0.00 0.00 0.00 3.42
1878 2165 6.513806 TGTAAATACAGTCTAACACGGCTA 57.486 37.500 0.00 0.00 0.00 3.93
1879 2166 5.395682 TGTAAATACAGTCTAACACGGCT 57.604 39.130 0.00 0.00 0.00 5.52
1880 2167 5.579511 ACATGTAAATACAGTCTAACACGGC 59.420 40.000 0.00 0.00 39.92 5.68
2010 2302 0.171903 GAAGCGGACGTAACCTAGCA 59.828 55.000 0.00 0.00 0.00 3.49
2912 3213 1.304381 GCTGTCCAATGGAGGCCAA 60.304 57.895 5.01 0.00 36.95 4.52
3571 3873 2.680312 TGGCATGTCTAGTGAGAAGC 57.320 50.000 0.00 0.00 31.96 3.86
3797 4099 1.336517 CCGAACTCCACTAAAGACGCA 60.337 52.381 0.00 0.00 0.00 5.24
4156 4459 3.791973 AGGCGTTCAACATGTTTTTGA 57.208 38.095 8.77 0.83 0.00 2.69
4345 4648 1.551883 GATGCATGGGCCAAAAGAGTT 59.448 47.619 11.89 0.00 40.13 3.01
4509 4812 4.982701 GGGGCCAGCAAGCACACT 62.983 66.667 4.39 0.00 38.17 3.55
5694 6000 7.227156 AGTGTCTTCATAGTCAAGTCCAAAAT 58.773 34.615 0.00 0.00 0.00 1.82
5719 6025 1.476833 GGCTTGACCACTGGACTGAAA 60.477 52.381 0.71 0.00 38.86 2.69
5888 6194 3.092301 TGGACAGACGACAGAGATGATT 58.908 45.455 0.00 0.00 0.00 2.57
6261 6567 0.314935 GGGTGTAGTCGTCGGTTTGA 59.685 55.000 0.00 0.00 0.00 2.69
6806 7112 4.082845 TGGAATACCGGATTTGCAGAAAA 58.917 39.130 9.46 0.00 39.42 2.29
7216 7530 4.083324 CGTGTTATTGTGGACAGCAAATCT 60.083 41.667 0.00 0.00 0.00 2.40
7217 7531 4.158384 CGTGTTATTGTGGACAGCAAATC 58.842 43.478 0.00 0.00 0.00 2.17
7226 7540 1.898902 CCCCAACGTGTTATTGTGGA 58.101 50.000 1.72 0.00 26.71 4.02
7227 7541 0.242555 GCCCCAACGTGTTATTGTGG 59.757 55.000 0.00 0.00 0.00 4.17
7228 7542 1.243902 AGCCCCAACGTGTTATTGTG 58.756 50.000 0.00 0.00 0.00 3.33
7229 7543 1.611491 CAAGCCCCAACGTGTTATTGT 59.389 47.619 0.00 0.00 0.00 2.71
7231 7545 2.279935 TCAAGCCCCAACGTGTTATT 57.720 45.000 0.00 0.00 0.00 1.40
7233 7547 1.883275 CAATCAAGCCCCAACGTGTTA 59.117 47.619 0.00 0.00 0.00 2.41
7234 7548 0.673437 CAATCAAGCCCCAACGTGTT 59.327 50.000 0.00 0.00 0.00 3.32
7236 7550 1.080569 GCAATCAAGCCCCAACGTG 60.081 57.895 0.00 0.00 0.00 4.49
7421 7770 0.458669 CGTAGTAGGTGCAATCCCGT 59.541 55.000 0.00 0.00 0.00 5.28
7424 7776 0.874607 CCGCGTAGTAGGTGCAATCC 60.875 60.000 4.92 0.00 0.00 3.01
7448 7800 1.150986 AGATGATGGGAGGAGTAGGGG 59.849 57.143 0.00 0.00 0.00 4.79
7468 7820 5.129634 TCAAGAATGCCAACAACTTACTGA 58.870 37.500 0.00 0.00 0.00 3.41
7522 7881 4.505313 AGTCAATGCATGATCATGATGC 57.495 40.909 34.65 23.44 45.45 3.91
7593 8170 7.490079 TGTTTTTGACACTACACTACACTAGTG 59.510 37.037 21.44 21.44 46.25 2.74
7594 8171 7.549839 TGTTTTTGACACTACACTACACTAGT 58.450 34.615 0.00 0.00 34.37 2.57
7595 8172 7.997107 TGTTTTTGACACTACACTACACTAG 57.003 36.000 0.00 0.00 32.00 2.57
7596 8173 8.951787 AATGTTTTTGACACTACACTACACTA 57.048 30.769 0.00 0.00 42.04 2.74
7597 8174 7.769044 AGAATGTTTTTGACACTACACTACACT 59.231 33.333 0.00 0.00 42.04 3.55
7598 8175 7.916552 AGAATGTTTTTGACACTACACTACAC 58.083 34.615 0.00 0.00 42.04 2.90
7599 8176 8.500753 AAGAATGTTTTTGACACTACACTACA 57.499 30.769 0.00 0.00 42.04 2.74
7612 8189 9.677567 CCGTCCCATAATATAAGAATGTTTTTG 57.322 33.333 0.00 0.00 0.00 2.44
7613 8190 8.856103 CCCGTCCCATAATATAAGAATGTTTTT 58.144 33.333 0.00 0.00 0.00 1.94
7614 8191 7.450323 CCCCGTCCCATAATATAAGAATGTTTT 59.550 37.037 0.00 0.00 0.00 2.43
7615 8192 6.946009 CCCCGTCCCATAATATAAGAATGTTT 59.054 38.462 0.00 0.00 0.00 2.83
7616 8193 6.481643 CCCCGTCCCATAATATAAGAATGTT 58.518 40.000 0.00 0.00 0.00 2.71
7617 8194 5.045140 CCCCCGTCCCATAATATAAGAATGT 60.045 44.000 0.00 0.00 0.00 2.71
7618 8195 5.437060 CCCCCGTCCCATAATATAAGAATG 58.563 45.833 0.00 0.00 0.00 2.67
7619 8196 5.710409 CCCCCGTCCCATAATATAAGAAT 57.290 43.478 0.00 0.00 0.00 2.40
7638 8215 5.993748 TCATTTCATTCAAAACTACCCCC 57.006 39.130 0.00 0.00 0.00 5.40
7639 8216 7.169158 TCATCATTTCATTCAAAACTACCCC 57.831 36.000 0.00 0.00 0.00 4.95
7640 8217 9.487790 TTTTCATCATTTCATTCAAAACTACCC 57.512 29.630 0.00 0.00 0.00 3.69
7672 8254 4.260948 GCATGCTTATTCAGAACCACTAGC 60.261 45.833 11.37 0.00 0.00 3.42
7704 8296 7.627311 ACTATAATATGAGCTCATGCATTCCA 58.373 34.615 34.48 16.46 42.74 3.53
7727 8319 6.479660 CACTGTTTTTGATGGTGCAAAATACT 59.520 34.615 0.00 0.00 44.45 2.12
7752 8419 1.006922 GCTGCTCACAAGGCAAACC 60.007 57.895 0.00 0.00 39.30 3.27
7794 8465 2.029649 TGTCTCCGCCACTGTAACTAAC 60.030 50.000 0.00 0.00 0.00 2.34
7795 8466 2.230508 CTGTCTCCGCCACTGTAACTAA 59.769 50.000 0.00 0.00 0.00 2.24
7796 8467 1.816835 CTGTCTCCGCCACTGTAACTA 59.183 52.381 0.00 0.00 0.00 2.24
7797 8468 0.603569 CTGTCTCCGCCACTGTAACT 59.396 55.000 0.00 0.00 0.00 2.24
7798 8469 0.389948 CCTGTCTCCGCCACTGTAAC 60.390 60.000 0.00 0.00 0.00 2.50
7799 8470 1.541310 CCCTGTCTCCGCCACTGTAA 61.541 60.000 0.00 0.00 0.00 2.41
7800 8471 1.982395 CCCTGTCTCCGCCACTGTA 60.982 63.158 0.00 0.00 0.00 2.74
7801 8472 3.314331 CCCTGTCTCCGCCACTGT 61.314 66.667 0.00 0.00 0.00 3.55
7802 8473 4.087892 CCCCTGTCTCCGCCACTG 62.088 72.222 0.00 0.00 0.00 3.66
7803 8474 4.316823 TCCCCTGTCTCCGCCACT 62.317 66.667 0.00 0.00 0.00 4.00
7804 8475 4.083862 GTCCCCTGTCTCCGCCAC 62.084 72.222 0.00 0.00 0.00 5.01
7807 8478 3.775654 CTGGTCCCCTGTCTCCGC 61.776 72.222 0.00 0.00 0.00 5.54
7808 8479 3.775654 GCTGGTCCCCTGTCTCCG 61.776 72.222 0.00 0.00 0.00 4.63
7809 8480 2.607750 TGCTGGTCCCCTGTCTCC 60.608 66.667 0.00 0.00 0.00 3.71
7810 8481 2.664081 CCTGCTGGTCCCCTGTCTC 61.664 68.421 0.51 0.00 0.00 3.36
7811 8482 2.608988 CCTGCTGGTCCCCTGTCT 60.609 66.667 0.51 0.00 0.00 3.41
7812 8483 3.721706 CCCTGCTGGTCCCCTGTC 61.722 72.222 9.00 0.00 0.00 3.51
7831 8502 4.109656 AGGTAGGGAGGGCCAGGG 62.110 72.222 6.18 0.00 35.15 4.45
7832 8503 2.628187 ATCAGGTAGGGAGGGCCAGG 62.628 65.000 6.18 0.00 35.15 4.45
7833 8504 0.695803 AATCAGGTAGGGAGGGCCAG 60.696 60.000 6.18 0.00 35.15 4.85
7834 8505 0.253630 AAATCAGGTAGGGAGGGCCA 60.254 55.000 6.18 0.00 35.15 5.36
7835 8506 0.183731 CAAATCAGGTAGGGAGGGCC 59.816 60.000 0.00 0.00 0.00 5.80
7836 8507 0.466372 GCAAATCAGGTAGGGAGGGC 60.466 60.000 0.00 0.00 0.00 5.19
7837 8508 1.216990 AGCAAATCAGGTAGGGAGGG 58.783 55.000 0.00 0.00 0.00 4.30
7838 8509 2.224066 CGTAGCAAATCAGGTAGGGAGG 60.224 54.545 0.00 0.00 0.00 4.30
7839 8510 2.693591 TCGTAGCAAATCAGGTAGGGAG 59.306 50.000 0.00 0.00 0.00 4.30
7840 8511 2.742348 TCGTAGCAAATCAGGTAGGGA 58.258 47.619 0.00 0.00 0.00 4.20
7841 8512 3.536956 TTCGTAGCAAATCAGGTAGGG 57.463 47.619 0.00 0.00 0.00 3.53
7842 8513 6.531948 GCTATATTCGTAGCAAATCAGGTAGG 59.468 42.308 1.32 0.00 45.03 3.18
7843 8514 7.513190 GCTATATTCGTAGCAAATCAGGTAG 57.487 40.000 1.32 0.00 45.03 3.18
7854 8525 6.584954 CACTGTTCATTGCTATATTCGTAGC 58.415 40.000 0.00 0.00 45.71 3.58
7855 8526 6.200854 TGCACTGTTCATTGCTATATTCGTAG 59.799 38.462 14.26 0.00 39.62 3.51
7856 8527 6.045955 TGCACTGTTCATTGCTATATTCGTA 58.954 36.000 14.26 0.00 39.62 3.43
7857 8528 4.875536 TGCACTGTTCATTGCTATATTCGT 59.124 37.500 14.26 0.00 39.62 3.85
7858 8529 5.408204 TGCACTGTTCATTGCTATATTCG 57.592 39.130 14.26 0.00 39.62 3.34
7859 8530 8.464770 TTTTTGCACTGTTCATTGCTATATTC 57.535 30.769 14.26 0.00 39.62 1.75
7860 8531 9.439500 AATTTTTGCACTGTTCATTGCTATATT 57.561 25.926 14.26 8.26 39.62 1.28
7862 8533 9.571810 CTAATTTTTGCACTGTTCATTGCTATA 57.428 29.630 14.26 2.41 39.62 1.31
7863 8534 8.306038 TCTAATTTTTGCACTGTTCATTGCTAT 58.694 29.630 14.26 3.22 39.62 2.97
7864 8535 7.656412 TCTAATTTTTGCACTGTTCATTGCTA 58.344 30.769 14.26 6.07 39.62 3.49
7865 8536 6.514947 TCTAATTTTTGCACTGTTCATTGCT 58.485 32.000 14.26 0.00 39.62 3.91
7866 8537 6.642131 TCTCTAATTTTTGCACTGTTCATTGC 59.358 34.615 7.94 7.94 39.33 3.56
7867 8538 8.578308 TTCTCTAATTTTTGCACTGTTCATTG 57.422 30.769 0.00 0.00 0.00 2.82
7892 8563 9.003658 GCCAAACTACTCTAATGCATGTATTAT 57.996 33.333 15.44 5.28 0.00 1.28
7893 8564 7.444183 GGCCAAACTACTCTAATGCATGTATTA 59.556 37.037 14.50 14.50 0.00 0.98
7894 8565 6.263168 GGCCAAACTACTCTAATGCATGTATT 59.737 38.462 13.75 13.75 0.00 1.89
7895 8566 5.765182 GGCCAAACTACTCTAATGCATGTAT 59.235 40.000 0.00 0.00 0.00 2.29
7896 8567 5.123227 GGCCAAACTACTCTAATGCATGTA 58.877 41.667 0.00 0.00 0.00 2.29
7897 8568 3.947834 GGCCAAACTACTCTAATGCATGT 59.052 43.478 0.00 0.00 0.00 3.21
7898 8569 3.316308 GGGCCAAACTACTCTAATGCATG 59.684 47.826 4.39 0.00 0.00 4.06
7899 8570 3.555966 GGGCCAAACTACTCTAATGCAT 58.444 45.455 4.39 0.00 0.00 3.96
7900 8571 2.356741 GGGGCCAAACTACTCTAATGCA 60.357 50.000 4.39 0.00 0.00 3.96
7901 8572 2.092375 AGGGGCCAAACTACTCTAATGC 60.092 50.000 4.39 0.00 0.00 3.56
7902 8573 3.054361 ACAGGGGCCAAACTACTCTAATG 60.054 47.826 4.39 0.00 0.00 1.90
7903 8574 3.190439 ACAGGGGCCAAACTACTCTAAT 58.810 45.455 4.39 0.00 0.00 1.73
7904 8575 2.570302 GACAGGGGCCAAACTACTCTAA 59.430 50.000 4.39 0.00 0.00 2.10
7905 8576 2.185387 GACAGGGGCCAAACTACTCTA 58.815 52.381 4.39 0.00 0.00 2.43
7906 8577 0.984995 GACAGGGGCCAAACTACTCT 59.015 55.000 4.39 0.00 0.00 3.24
7907 8578 0.690762 TGACAGGGGCCAAACTACTC 59.309 55.000 4.39 0.00 0.00 2.59
7908 8579 1.282157 GATGACAGGGGCCAAACTACT 59.718 52.381 4.39 0.00 0.00 2.57
7909 8580 1.682087 GGATGACAGGGGCCAAACTAC 60.682 57.143 4.39 0.00 0.00 2.73
7910 8581 0.623723 GGATGACAGGGGCCAAACTA 59.376 55.000 4.39 0.00 0.00 2.24
7911 8582 1.384191 GGATGACAGGGGCCAAACT 59.616 57.895 4.39 0.00 0.00 2.66
7912 8583 0.541764 TTGGATGACAGGGGCCAAAC 60.542 55.000 4.39 0.00 37.46 2.93
7913 8584 0.189574 TTTGGATGACAGGGGCCAAA 59.810 50.000 4.39 0.00 45.29 3.28
7914 8585 0.251742 CTTTGGATGACAGGGGCCAA 60.252 55.000 4.39 0.00 38.54 4.52
7915 8586 1.383799 CTTTGGATGACAGGGGCCA 59.616 57.895 4.39 0.00 0.00 5.36
7916 8587 0.251787 AACTTTGGATGACAGGGGCC 60.252 55.000 0.00 0.00 0.00 5.80
7917 8588 1.273327 CAAACTTTGGATGACAGGGGC 59.727 52.381 0.00 0.00 0.00 5.80
7918 8589 2.297033 CACAAACTTTGGATGACAGGGG 59.703 50.000 6.47 0.00 34.12 4.79
7919 8590 2.958355 ACACAAACTTTGGATGACAGGG 59.042 45.455 6.47 0.00 34.12 4.45
7920 8591 5.766150 TTACACAAACTTTGGATGACAGG 57.234 39.130 6.47 0.00 34.12 4.00
7921 8592 7.306749 GCAAATTACACAAACTTTGGATGACAG 60.307 37.037 6.47 0.00 34.12 3.51
7922 8593 6.478344 GCAAATTACACAAACTTTGGATGACA 59.522 34.615 6.47 0.00 34.12 3.58
7923 8594 6.073819 GGCAAATTACACAAACTTTGGATGAC 60.074 38.462 6.47 0.00 34.12 3.06
7924 8595 5.988561 GGCAAATTACACAAACTTTGGATGA 59.011 36.000 6.47 0.00 34.12 2.92
7925 8596 5.179182 GGGCAAATTACACAAACTTTGGATG 59.821 40.000 6.47 0.00 34.12 3.51
7926 8597 5.304778 GGGCAAATTACACAAACTTTGGAT 58.695 37.500 6.47 0.00 34.12 3.41
7927 8598 4.443598 GGGGCAAATTACACAAACTTTGGA 60.444 41.667 6.47 0.00 34.12 3.53
7928 8599 3.812609 GGGGCAAATTACACAAACTTTGG 59.187 43.478 6.47 0.00 34.12 3.28
7929 8600 4.702831 AGGGGCAAATTACACAAACTTTG 58.297 39.130 0.00 0.00 0.00 2.77
7930 8601 4.653801 AGAGGGGCAAATTACACAAACTTT 59.346 37.500 0.00 0.00 0.00 2.66
7931 8602 4.223144 AGAGGGGCAAATTACACAAACTT 58.777 39.130 0.00 0.00 0.00 2.66
7932 8603 3.844640 AGAGGGGCAAATTACACAAACT 58.155 40.909 0.00 0.00 0.00 2.66
7933 8604 5.715434 TTAGAGGGGCAAATTACACAAAC 57.285 39.130 0.00 0.00 0.00 2.93
7934 8605 6.252995 AGATTAGAGGGGCAAATTACACAAA 58.747 36.000 0.00 0.00 0.00 2.83
7935 8606 5.826643 AGATTAGAGGGGCAAATTACACAA 58.173 37.500 0.00 0.00 0.00 3.33
7936 8607 5.450818 AGATTAGAGGGGCAAATTACACA 57.549 39.130 0.00 0.00 0.00 3.72
7937 8608 6.775594 AAAGATTAGAGGGGCAAATTACAC 57.224 37.500 0.00 0.00 0.00 2.90
7938 8609 9.487442 AATTAAAGATTAGAGGGGCAAATTACA 57.513 29.630 0.00 0.00 0.00 2.41
7939 8610 9.967346 GAATTAAAGATTAGAGGGGCAAATTAC 57.033 33.333 0.00 0.00 0.00 1.89
7940 8611 9.143155 GGAATTAAAGATTAGAGGGGCAAATTA 57.857 33.333 0.00 0.00 0.00 1.40
7941 8612 7.846311 AGGAATTAAAGATTAGAGGGGCAAATT 59.154 33.333 0.00 0.00 0.00 1.82
7942 8613 7.365426 AGGAATTAAAGATTAGAGGGGCAAAT 58.635 34.615 0.00 0.00 0.00 2.32
7943 8614 6.741724 AGGAATTAAAGATTAGAGGGGCAAA 58.258 36.000 0.00 0.00 0.00 3.68
7944 8615 6.341408 AGGAATTAAAGATTAGAGGGGCAA 57.659 37.500 0.00 0.00 0.00 4.52
7945 8616 5.994416 AGGAATTAAAGATTAGAGGGGCA 57.006 39.130 0.00 0.00 0.00 5.36
7946 8617 5.941058 GCTAGGAATTAAAGATTAGAGGGGC 59.059 44.000 0.00 0.00 0.00 5.80
7947 8618 7.323052 AGCTAGGAATTAAAGATTAGAGGGG 57.677 40.000 0.00 0.00 0.00 4.79
7948 8619 7.390823 GGAGCTAGGAATTAAAGATTAGAGGG 58.609 42.308 0.00 0.00 0.00 4.30
7949 8620 7.093992 CGGAGCTAGGAATTAAAGATTAGAGG 58.906 42.308 0.00 0.00 0.00 3.69
7967 8638 2.169540 AACTAACCAGTGGCGGAGCTA 61.170 52.381 9.78 0.00 45.05 3.32
7968 8639 1.481056 AACTAACCAGTGGCGGAGCT 61.481 55.000 9.78 0.00 45.05 4.09
7969 8640 0.248289 TAACTAACCAGTGGCGGAGC 59.752 55.000 9.78 0.00 44.99 4.70
7970 8641 2.028385 ACTTAACTAACCAGTGGCGGAG 60.028 50.000 9.78 6.55 34.36 4.63
7971 8642 1.972795 ACTTAACTAACCAGTGGCGGA 59.027 47.619 9.78 0.00 34.36 5.54
7972 8643 2.467566 ACTTAACTAACCAGTGGCGG 57.532 50.000 9.78 1.83 34.36 6.13
7973 8644 4.309099 TGTTACTTAACTAACCAGTGGCG 58.691 43.478 9.78 0.05 37.12 5.69
7974 8645 5.049198 GGTTGTTACTTAACTAACCAGTGGC 60.049 44.000 9.78 0.00 41.54 5.01
7975 8646 6.204108 CAGGTTGTTACTTAACTAACCAGTGG 59.796 42.308 22.10 7.91 42.76 4.00
7976 8647 6.293244 GCAGGTTGTTACTTAACTAACCAGTG 60.293 42.308 22.10 17.10 42.76 3.66
7977 8648 5.761726 GCAGGTTGTTACTTAACTAACCAGT 59.238 40.000 22.10 10.10 42.76 4.00
7978 8649 5.761234 TGCAGGTTGTTACTTAACTAACCAG 59.239 40.000 22.10 18.34 42.76 4.00
7979 8650 5.682659 TGCAGGTTGTTACTTAACTAACCA 58.317 37.500 22.10 9.67 42.76 3.67
7980 8651 5.334646 GCTGCAGGTTGTTACTTAACTAACC 60.335 44.000 17.12 17.18 41.84 2.85
8107 9168 1.231958 CCGCGCTTCTAAAACCCACA 61.232 55.000 5.56 0.00 0.00 4.17
8132 9199 3.816523 TGGTTTATGTCGAAGTGGTTTCC 59.183 43.478 0.00 0.00 31.82 3.13
8206 9328 7.294482 AGGAGCCCTAAATATCTTCAGAAATCT 59.706 37.037 0.00 0.00 28.47 2.40
8207 9329 7.457561 AGGAGCCCTAAATATCTTCAGAAATC 58.542 38.462 0.00 0.00 28.47 2.17
8208 9330 7.399674 AGGAGCCCTAAATATCTTCAGAAAT 57.600 36.000 0.00 0.00 28.47 2.17
8209 9331 6.831664 AGGAGCCCTAAATATCTTCAGAAA 57.168 37.500 0.00 0.00 28.47 2.52
8212 9334 6.179906 TGAAGGAGCCCTAAATATCTTCAG 57.820 41.667 0.00 0.00 35.63 3.02
8214 9336 6.000840 CCTTGAAGGAGCCCTAAATATCTTC 58.999 44.000 4.95 0.00 37.67 2.87
8359 9543 1.446907 CTCATTGCTGGTCAGTGTCC 58.553 55.000 0.00 0.00 34.43 4.02
8490 10532 1.156645 CCTATGCTCACGGCTGAAGC 61.157 60.000 15.03 15.03 42.39 3.86
8491 10533 0.176680 ACCTATGCTCACGGCTGAAG 59.823 55.000 0.00 0.00 42.39 3.02
8590 10636 1.809547 CAAAGTCCACACACACACACA 59.190 47.619 0.00 0.00 0.00 3.72
8591 10637 1.810151 ACAAAGTCCACACACACACAC 59.190 47.619 0.00 0.00 0.00 3.82
8607 10653 3.138283 AGATCAACAAGGGACTGGACAAA 59.862 43.478 0.00 0.00 40.86 2.83
8619 10666 7.532571 TCTATGCATTGACAAAGATCAACAAG 58.467 34.615 3.54 0.00 41.29 3.16
8651 10698 7.501844 AGAGGCCAAGTAGAAGTGAAATATAC 58.498 38.462 5.01 0.00 0.00 1.47
8716 10763 5.659463 TCAAATTCCATAAAGAATTGGGCG 58.341 37.500 0.59 0.00 43.90 6.13
8927 10979 7.663081 GTCCATGAGATATGTGGAAACATGTAT 59.337 37.037 0.00 0.00 46.14 2.29
9124 11193 9.750125 GATACATTTCCCTTCAACCAATATTTC 57.250 33.333 0.00 0.00 0.00 2.17
9435 11509 4.776349 TGACAGAGTTGCCTACAAAAAGA 58.224 39.130 0.00 0.00 37.58 2.52
9436 11510 5.499139 TTGACAGAGTTGCCTACAAAAAG 57.501 39.130 0.00 0.00 37.58 2.27
9437 11511 6.770785 AGTATTGACAGAGTTGCCTACAAAAA 59.229 34.615 0.00 0.00 37.58 1.94
9438 11512 6.296026 AGTATTGACAGAGTTGCCTACAAAA 58.704 36.000 0.00 0.00 37.58 2.44
9439 11513 5.865085 AGTATTGACAGAGTTGCCTACAAA 58.135 37.500 0.00 0.00 37.58 2.83
9440 11514 5.011635 TGAGTATTGACAGAGTTGCCTACAA 59.988 40.000 0.00 0.00 0.00 2.41
9441 11515 4.526650 TGAGTATTGACAGAGTTGCCTACA 59.473 41.667 0.00 0.00 0.00 2.74
9442 11516 5.073311 TGAGTATTGACAGAGTTGCCTAC 57.927 43.478 0.00 0.00 0.00 3.18
9443 11517 5.480422 TCTTGAGTATTGACAGAGTTGCCTA 59.520 40.000 0.00 0.00 0.00 3.93
9444 11518 4.284490 TCTTGAGTATTGACAGAGTTGCCT 59.716 41.667 0.00 0.00 0.00 4.75
9445 11519 4.569943 TCTTGAGTATTGACAGAGTTGCC 58.430 43.478 0.00 0.00 0.00 4.52
9446 11520 5.390356 GCTTCTTGAGTATTGACAGAGTTGC 60.390 44.000 0.00 0.00 0.00 4.17
9447 11521 5.931146 AGCTTCTTGAGTATTGACAGAGTTG 59.069 40.000 0.00 0.00 0.00 3.16
9448 11522 6.107901 AGCTTCTTGAGTATTGACAGAGTT 57.892 37.500 0.00 0.00 0.00 3.01
9449 11523 5.736951 AGCTTCTTGAGTATTGACAGAGT 57.263 39.130 0.00 0.00 0.00 3.24
9450 11524 9.979578 ATATTAGCTTCTTGAGTATTGACAGAG 57.020 33.333 0.00 0.00 0.00 3.35
9502 11576 4.971939 ACTTTAATTTGGGCTGCATTGTT 58.028 34.783 0.50 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.