Multiple sequence alignment - TraesCS5B01G018500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G018500 chr5B 100.000 3462 0 0 1419 4880 17966020 17969481 0.000000e+00 6394.0
1 TraesCS5B01G018500 chr5B 100.000 1118 0 0 1 1118 17964602 17965719 0.000000e+00 2065.0
2 TraesCS5B01G018500 chr5B 91.589 214 14 4 2080 2292 52319724 52319514 4.780000e-75 292.0
3 TraesCS5B01G018500 chr5B 91.244 217 15 4 2077 2292 535100028 535100241 4.780000e-75 292.0
4 TraesCS5B01G018500 chr5B 90.640 203 19 0 1777 1979 52319957 52319755 2.240000e-68 270.0
5 TraesCS5B01G018500 chr5B 84.722 216 20 3 3448 3654 52320169 52319958 2.300000e-48 204.0
6 TraesCS5B01G018500 chr5A 87.554 2764 192 80 2010 4721 17825656 17828319 0.000000e+00 3059.0
7 TraesCS5B01G018500 chr5A 91.642 335 20 4 1631 1958 17825322 17825655 1.600000e-124 457.0
8 TraesCS5B01G018500 chr5A 91.362 301 11 7 825 1116 17824391 17824685 9.840000e-107 398.0
9 TraesCS5B01G018500 chr5A 92.166 217 13 4 2077 2292 32952115 32952328 2.210000e-78 303.0
10 TraesCS5B01G018500 chr5A 90.000 200 20 0 1777 1976 32951885 32952084 4.850000e-65 259.0
11 TraesCS5B01G018500 chr5A 88.835 206 20 2 1777 1979 487741940 487741735 2.920000e-62 250.0
12 TraesCS5B01G018500 chr5A 93.333 135 7 2 4746 4880 17828400 17828532 1.070000e-46 198.0
13 TraesCS5B01G018500 chr5A 82.488 217 24 3 3448 3654 32951672 32951884 1.400000e-40 178.0
14 TraesCS5B01G018500 chr5A 95.876 97 4 0 664 760 17824273 17824369 1.820000e-34 158.0
15 TraesCS5B01G018500 chr5A 88.281 128 12 2 3530 3654 487742068 487741941 3.040000e-32 150.0
16 TraesCS5B01G018500 chr5A 87.500 104 12 1 319 422 624196499 624196397 8.580000e-23 119.0
17 TraesCS5B01G018500 chr5A 86.667 75 8 2 1491 1564 17825109 17825182 1.130000e-11 82.4
18 TraesCS5B01G018500 chr5D 90.027 2226 116 39 2534 4721 25315796 25313639 0.000000e+00 2784.0
19 TraesCS5B01G018500 chr5D 92.548 416 30 1 2083 2498 25316217 25315803 3.250000e-166 595.0
20 TraesCS5B01G018500 chr5D 86.415 530 31 20 611 1110 25317685 25317167 4.300000e-150 542.0
21 TraesCS5B01G018500 chr5D 89.912 228 19 4 1734 1958 25316451 25316225 1.720000e-74 291.0
22 TraesCS5B01G018500 chr5D 89.759 166 9 7 4721 4880 25313585 25313422 6.400000e-49 206.0
23 TraesCS5B01G018500 chr5D 87.255 102 13 0 321 422 361569217 361569116 3.090000e-22 117.0
24 TraesCS5B01G018500 chr5D 89.706 68 7 0 1491 1558 25316726 25316659 2.420000e-13 87.9
25 TraesCS5B01G018500 chr7A 87.455 837 73 16 2493 3311 501107027 501107849 0.000000e+00 935.0
26 TraesCS5B01G018500 chr7A 90.493 284 24 3 3 285 612528565 612528846 5.970000e-99 372.0
27 TraesCS5B01G018500 chr7A 85.075 134 16 2 289 422 635049615 635049744 3.060000e-27 134.0
28 TraesCS5B01G018500 chr6A 87.351 838 74 16 2493 3312 571277490 571278313 0.000000e+00 931.0
29 TraesCS5B01G018500 chr6A 90.526 285 24 3 3 285 63197144 63197427 1.660000e-99 374.0
30 TraesCS5B01G018500 chr3A 87.351 838 74 16 2493 3312 425586880 425586057 0.000000e+00 931.0
31 TraesCS5B01G018500 chr3A 87.232 838 75 16 2493 3312 91450953 91450130 0.000000e+00 926.0
32 TraesCS5B01G018500 chr3A 91.705 217 14 4 2077 2292 336005301 336005514 1.030000e-76 298.0
33 TraesCS5B01G018500 chr3A 89.500 200 21 0 1777 1976 336005071 336005270 2.250000e-63 254.0
34 TraesCS5B01G018500 chr2A 89.541 392 37 4 2493 2882 776477473 776477084 1.220000e-135 494.0
35 TraesCS5B01G018500 chr2A 92.056 214 13 4 2080 2292 441104451 441104241 1.030000e-76 298.0
36 TraesCS5B01G018500 chr2A 89.655 203 21 0 1777 1979 441104685 441104483 4.850000e-65 259.0
37 TraesCS5B01G018500 chr2A 85.437 103 14 1 320 422 102115539 102115640 6.680000e-19 106.0
38 TraesCS5B01G018500 chr2A 94.595 37 2 0 500 536 772839759 772839795 1.900000e-04 58.4
39 TraesCS5B01G018500 chr1D 91.549 284 20 4 3 285 438432593 438432873 5.920000e-104 388.0
40 TraesCS5B01G018500 chr1D 90.526 285 22 2 1 285 364710418 364710697 5.970000e-99 372.0
41 TraesCS5B01G018500 chr1A 90.877 285 23 3 3 285 573903413 573903130 3.560000e-101 379.0
42 TraesCS5B01G018500 chr6D 90.175 285 25 2 1 285 237363979 237363698 7.720000e-98 368.0
43 TraesCS5B01G018500 chr6D 90.244 287 20 4 3 288 369854503 369854224 7.720000e-98 368.0
44 TraesCS5B01G018500 chr6D 90.141 284 27 1 3 285 382940336 382940053 7.720000e-98 368.0
45 TraesCS5B01G018500 chr2B 90.175 285 25 2 1 285 118802450 118802731 7.720000e-98 368.0
46 TraesCS5B01G018500 chr2B 89.500 200 21 0 1777 1976 657481149 657481348 2.250000e-63 254.0
47 TraesCS5B01G018500 chr2B 88.281 128 12 2 3530 3654 49609732 49609605 3.040000e-32 150.0
48 TraesCS5B01G018500 chrUn 92.056 214 13 4 2080 2292 73442005 73441795 1.030000e-76 298.0
49 TraesCS5B01G018500 chr6B 92.056 214 13 4 2080 2292 80801575 80801365 1.030000e-76 298.0
50 TraesCS5B01G018500 chr6B 89.655 203 21 0 1777 1979 151885345 151885143 4.850000e-65 259.0
51 TraesCS5B01G018500 chr6B 81.746 126 15 6 291 414 62816612 62816731 1.120000e-16 99.0
52 TraesCS5B01G018500 chr7D 91.244 217 13 4 2082 2292 287708296 287708512 1.720000e-74 291.0
53 TraesCS5B01G018500 chr7D 84.286 210 24 3 3448 3654 287707848 287708051 3.850000e-46 196.0
54 TraesCS5B01G018500 chr4A 94.702 151 8 0 2493 2643 545620537 545620387 8.170000e-58 235.0
55 TraesCS5B01G018500 chr4A 74.022 639 102 48 3266 3879 596837045 596836446 8.280000e-48 202.0
56 TraesCS5B01G018500 chr4A 88.281 128 12 2 3530 3654 663304386 663304513 3.040000e-32 150.0
57 TraesCS5B01G018500 chr4A 84.328 134 17 2 289 422 311740514 311740385 1.430000e-25 128.0
58 TraesCS5B01G018500 chr4A 93.258 89 3 1 1001 1089 596840310 596840225 1.430000e-25 128.0
59 TraesCS5B01G018500 chr4A 96.154 78 3 0 1012 1089 596841727 596841650 1.430000e-25 128.0
60 TraesCS5B01G018500 chr4B 93.377 151 9 1 2493 2643 75188872 75189021 6.360000e-54 222.0
61 TraesCS5B01G018500 chr4B 75.252 497 76 34 3395 3879 11713687 11714148 4.980000e-45 193.0
62 TraesCS5B01G018500 chr4B 88.281 128 11 3 3530 3654 610800223 610800097 3.040000e-32 150.0
63 TraesCS5B01G018500 chr4B 89.908 109 3 5 1001 1105 11710890 11710994 3.060000e-27 134.0
64 TraesCS5B01G018500 chr4D 77.695 269 43 11 3621 3879 6518694 6518955 1.090000e-31 148.0
65 TraesCS5B01G018500 chr4D 90.654 107 2 5 1001 1103 6515649 6515751 8.520000e-28 135.0
66 TraesCS5B01G018500 chr2D 85.075 134 16 2 289 422 620479732 620479861 3.060000e-27 134.0
67 TraesCS5B01G018500 chr2D 81.618 136 17 5 291 426 584628746 584628873 6.680000e-19 106.0
68 TraesCS5B01G018500 chr2D 94.595 37 1 1 500 535 193151394 193151358 6.820000e-04 56.5
69 TraesCS5B01G018500 chr7B 84.677 124 15 1 299 422 576676021 576675902 2.390000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G018500 chr5B 17964602 17969481 4879 False 4229.500000 6394 100.000000 1 4880 2 chr5B.!!$F2 4879
1 TraesCS5B01G018500 chr5B 52319514 52320169 655 True 255.333333 292 88.983667 1777 3654 3 chr5B.!!$R1 1877
2 TraesCS5B01G018500 chr5A 17824273 17828532 4259 False 725.400000 3059 91.072333 664 4880 6 chr5A.!!$F1 4216
3 TraesCS5B01G018500 chr5A 32951672 32952328 656 False 246.666667 303 88.218000 1777 3654 3 chr5A.!!$F2 1877
4 TraesCS5B01G018500 chr5D 25313422 25317685 4263 True 750.983333 2784 89.727833 611 4880 6 chr5D.!!$R2 4269
5 TraesCS5B01G018500 chr7A 501107027 501107849 822 False 935.000000 935 87.455000 2493 3311 1 chr7A.!!$F1 818
6 TraesCS5B01G018500 chr6A 571277490 571278313 823 False 931.000000 931 87.351000 2493 3312 1 chr6A.!!$F2 819
7 TraesCS5B01G018500 chr3A 425586057 425586880 823 True 931.000000 931 87.351000 2493 3312 1 chr3A.!!$R2 819
8 TraesCS5B01G018500 chr3A 91450130 91450953 823 True 926.000000 926 87.232000 2493 3312 1 chr3A.!!$R1 819
9 TraesCS5B01G018500 chr7D 287707848 287708512 664 False 243.500000 291 87.765000 2082 3654 2 chr7D.!!$F1 1572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
179 180 0.034198 TTCCGTGTCGCAATCCTCAA 59.966 50.0 0.00 0.0 0.00 3.02 F
405 406 0.104855 AGCTCAGACGCAACAACAGA 59.895 50.0 0.00 0.0 0.00 3.41 F
560 561 0.175531 ATTACTGCAAATTGCCCCGC 59.824 50.0 15.98 0.0 44.23 6.13 F
1658 1926 0.519519 TTATCCGCTTTGTGCCAACG 59.480 50.0 0.00 0.0 38.78 4.10 F
1745 2020 0.455410 GGTGTTTTGTGCTGTGCTCA 59.545 50.0 0.00 0.0 0.00 4.26 F
3045 3372 0.110486 GTGGCCTTCTGGGAAAGTGA 59.890 55.0 3.32 0.0 37.23 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1628 1682 0.255890 AGCGGATAACTTGGCATGGT 59.744 50.000 5.31 0.22 0.00 3.55 R
1688 1956 0.446222 CACCGGTAAAATGTCCAGCG 59.554 55.000 6.87 0.00 0.00 5.18 R
1726 2001 0.455410 TGAGCACAGCACAAAACACC 59.545 50.000 0.00 0.00 0.00 4.16 R
2806 3121 1.636148 ACCCTAACCGCTTAGTGTCA 58.364 50.000 0.00 0.00 0.00 3.58 R
3282 3622 2.224843 TGCAGGAAATCCAAGCTTCTGA 60.225 45.455 11.96 5.60 39.21 3.27 R
4538 4880 0.036010 CCGAGACAGCACAAAGGGAT 60.036 55.000 0.00 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.909140 CTCAACCTCTCCCTCCTCC 58.091 63.158 0.00 0.00 0.00 4.30
19 20 0.338120 CTCAACCTCTCCCTCCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
20 21 0.793617 TCAACCTCTCCCTCCTCCTT 59.206 55.000 0.00 0.00 0.00 3.36
21 22 0.908198 CAACCTCTCCCTCCTCCTTG 59.092 60.000 0.00 0.00 0.00 3.61
22 23 0.912006 AACCTCTCCCTCCTCCTTGC 60.912 60.000 0.00 0.00 0.00 4.01
24 25 1.336632 CCTCTCCCTCCTCCTTGCTG 61.337 65.000 0.00 0.00 0.00 4.41
25 26 0.325110 CTCTCCCTCCTCCTTGCTGA 60.325 60.000 0.00 0.00 0.00 4.26
26 27 0.117140 TCTCCCTCCTCCTTGCTGAA 59.883 55.000 0.00 0.00 0.00 3.02
28 29 1.140652 CTCCCTCCTCCTTGCTGAATC 59.859 57.143 0.00 0.00 0.00 2.52
29 30 0.914644 CCCTCCTCCTTGCTGAATCA 59.085 55.000 0.00 0.00 0.00 2.57
31 32 2.641305 CCTCCTCCTTGCTGAATCAAG 58.359 52.381 0.00 0.00 42.23 3.02
36 37 3.689224 CTTGCTGAATCAAGGCGTG 57.311 52.632 0.00 0.00 39.68 5.34
37 38 0.169672 CTTGCTGAATCAAGGCGTGG 59.830 55.000 0.00 0.00 39.68 4.94
38 39 1.865788 TTGCTGAATCAAGGCGTGGC 61.866 55.000 0.00 0.00 0.00 5.01
39 40 2.334946 GCTGAATCAAGGCGTGGCA 61.335 57.895 0.00 0.00 0.00 4.92
40 41 1.798735 CTGAATCAAGGCGTGGCAG 59.201 57.895 0.00 2.93 0.00 4.85
41 42 0.674581 CTGAATCAAGGCGTGGCAGA 60.675 55.000 11.15 0.00 0.00 4.26
42 43 0.955428 TGAATCAAGGCGTGGCAGAC 60.955 55.000 0.00 0.00 0.00 3.51
67 68 3.947841 GGCTGCACGCGTGTTGAA 61.948 61.111 36.80 20.50 40.44 2.69
68 69 2.722188 GCTGCACGCGTGTTGAAC 60.722 61.111 36.80 21.93 0.00 3.18
99 100 0.297820 GTTGTTCGGCGCTTAGATCG 59.702 55.000 7.64 0.17 0.00 3.69
100 101 0.804544 TTGTTCGGCGCTTAGATCGG 60.805 55.000 7.64 0.00 0.00 4.18
101 102 1.065273 GTTCGGCGCTTAGATCGGA 59.935 57.895 7.64 0.00 0.00 4.55
102 103 0.526954 GTTCGGCGCTTAGATCGGAA 60.527 55.000 7.64 0.00 0.00 4.30
104 105 0.039437 TCGGCGCTTAGATCGGAATC 60.039 55.000 7.64 0.00 0.00 2.52
105 106 1.009389 CGGCGCTTAGATCGGAATCC 61.009 60.000 7.64 0.00 31.78 3.01
108 109 1.784525 CGCTTAGATCGGAATCCACC 58.215 55.000 0.00 0.00 31.78 4.61
116 117 1.951130 CGGAATCCACCGCGATCTG 60.951 63.158 8.23 0.00 46.20 2.90
117 118 1.441729 GGAATCCACCGCGATCTGA 59.558 57.895 8.23 0.00 0.00 3.27
132 133 2.453650 TCTGAATCGCTACGAGAACG 57.546 50.000 0.00 0.00 39.91 3.95
133 134 1.063616 TCTGAATCGCTACGAGAACGG 59.936 52.381 0.00 0.00 44.46 4.44
150 151 2.695646 GCTCGTTCATCCGCGTTC 59.304 61.111 4.92 0.00 0.00 3.95
151 152 1.805945 GCTCGTTCATCCGCGTTCT 60.806 57.895 4.92 0.00 0.00 3.01
153 154 0.366871 CTCGTTCATCCGCGTTCTTG 59.633 55.000 4.92 0.00 0.00 3.02
155 156 1.068402 TCGTTCATCCGCGTTCTTGTA 60.068 47.619 4.92 0.00 0.00 2.41
157 158 2.471749 CGTTCATCCGCGTTCTTGTAAC 60.472 50.000 4.92 0.00 0.00 2.50
158 159 1.342555 TCATCCGCGTTCTTGTAACG 58.657 50.000 4.92 5.94 45.56 3.18
164 165 3.921081 CGTTCTTGTAACGCTTCCG 57.079 52.632 0.00 0.00 36.82 4.30
175 176 2.785258 GCTTCCGTGTCGCAATCC 59.215 61.111 0.00 0.00 0.00 3.01
177 178 1.696832 GCTTCCGTGTCGCAATCCTC 61.697 60.000 0.00 0.00 0.00 3.71
179 180 0.034198 TTCCGTGTCGCAATCCTCAA 59.966 50.000 0.00 0.00 0.00 3.02
180 181 0.389817 TCCGTGTCGCAATCCTCAAG 60.390 55.000 0.00 0.00 0.00 3.02
183 184 0.321653 GTGTCGCAATCCTCAAGGGT 60.322 55.000 0.00 0.00 36.25 4.34
184 185 1.066430 GTGTCGCAATCCTCAAGGGTA 60.066 52.381 0.00 0.00 36.25 3.69
185 186 1.837439 TGTCGCAATCCTCAAGGGTAT 59.163 47.619 0.00 0.00 36.25 2.73
186 187 2.213499 GTCGCAATCCTCAAGGGTATG 58.787 52.381 0.00 0.00 36.25 2.39
188 189 2.503765 TCGCAATCCTCAAGGGTATGAA 59.496 45.455 0.00 0.00 36.25 2.57
189 190 2.874701 CGCAATCCTCAAGGGTATGAAG 59.125 50.000 0.00 0.00 36.25 3.02
190 191 2.620585 GCAATCCTCAAGGGTATGAAGC 59.379 50.000 0.00 0.00 36.25 3.86
191 192 3.686691 GCAATCCTCAAGGGTATGAAGCT 60.687 47.826 0.00 0.00 36.25 3.74
192 193 3.853355 ATCCTCAAGGGTATGAAGCTG 57.147 47.619 0.00 0.00 36.25 4.24
193 194 1.210478 TCCTCAAGGGTATGAAGCTGC 59.790 52.381 0.00 0.00 36.25 5.25
194 195 1.211457 CCTCAAGGGTATGAAGCTGCT 59.789 52.381 0.00 0.00 0.00 4.24
195 196 2.559440 CTCAAGGGTATGAAGCTGCTC 58.441 52.381 1.00 0.00 0.00 4.26
198 199 1.127343 AGGGTATGAAGCTGCTCTCC 58.873 55.000 1.00 1.52 0.00 3.71
199 200 0.107643 GGGTATGAAGCTGCTCTCCC 59.892 60.000 1.00 7.17 0.00 4.30
200 201 0.107643 GGTATGAAGCTGCTCTCCCC 59.892 60.000 1.00 0.00 0.00 4.81
202 203 1.069978 GTATGAAGCTGCTCTCCCCTC 59.930 57.143 1.00 0.00 0.00 4.30
208 209 1.109323 GCTGCTCTCCCCTCTCTCTC 61.109 65.000 0.00 0.00 0.00 3.20
209 210 0.552848 CTGCTCTCCCCTCTCTCTCT 59.447 60.000 0.00 0.00 0.00 3.10
210 211 0.550914 TGCTCTCCCCTCTCTCTCTC 59.449 60.000 0.00 0.00 0.00 3.20
212 213 1.202818 GCTCTCCCCTCTCTCTCTCTC 60.203 61.905 0.00 0.00 0.00 3.20
213 214 2.412591 CTCTCCCCTCTCTCTCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
214 215 2.370189 CTCTCCCCTCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
215 216 1.070758 CTCCCCTCTCTCTCTCTCTCG 59.929 61.905 0.00 0.00 0.00 4.04
216 217 0.837272 CCCCTCTCTCTCTCTCTCGT 59.163 60.000 0.00 0.00 0.00 4.18
218 219 2.288666 CCCTCTCTCTCTCTCTCGTTG 58.711 57.143 0.00 0.00 0.00 4.10
219 220 1.670811 CCTCTCTCTCTCTCTCGTTGC 59.329 57.143 0.00 0.00 0.00 4.17
220 221 2.632377 CTCTCTCTCTCTCTCGTTGCT 58.368 52.381 0.00 0.00 0.00 3.91
221 222 3.431626 CCTCTCTCTCTCTCTCGTTGCTA 60.432 52.174 0.00 0.00 0.00 3.49
222 223 3.792401 TCTCTCTCTCTCTCGTTGCTAG 58.208 50.000 0.00 0.00 0.00 3.42
225 226 4.328536 TCTCTCTCTCTCGTTGCTAGTTT 58.671 43.478 0.00 0.00 0.00 2.66
226 227 4.393680 TCTCTCTCTCTCGTTGCTAGTTTC 59.606 45.833 0.00 0.00 0.00 2.78
227 228 4.328536 TCTCTCTCTCGTTGCTAGTTTCT 58.671 43.478 0.00 0.00 0.00 2.52
228 229 4.393680 TCTCTCTCTCGTTGCTAGTTTCTC 59.606 45.833 0.00 0.00 0.00 2.87
229 230 3.440872 TCTCTCTCGTTGCTAGTTTCTCC 59.559 47.826 0.00 0.00 0.00 3.71
232 233 3.076621 TCTCGTTGCTAGTTTCTCCGTA 58.923 45.455 0.00 0.00 0.00 4.02
233 234 3.126514 TCTCGTTGCTAGTTTCTCCGTAG 59.873 47.826 0.00 0.00 0.00 3.51
234 235 3.076621 TCGTTGCTAGTTTCTCCGTAGA 58.923 45.455 0.00 0.00 0.00 2.59
235 236 3.693085 TCGTTGCTAGTTTCTCCGTAGAT 59.307 43.478 0.00 0.00 0.00 1.98
237 238 4.265556 CGTTGCTAGTTTCTCCGTAGATTG 59.734 45.833 0.00 0.00 0.00 2.67
238 239 5.408356 GTTGCTAGTTTCTCCGTAGATTGA 58.592 41.667 0.00 0.00 0.00 2.57
239 240 5.854010 TGCTAGTTTCTCCGTAGATTGAT 57.146 39.130 0.00 0.00 0.00 2.57
240 241 5.833082 TGCTAGTTTCTCCGTAGATTGATC 58.167 41.667 0.00 0.00 0.00 2.92
242 243 6.096987 TGCTAGTTTCTCCGTAGATTGATCTT 59.903 38.462 0.00 0.00 38.32 2.40
243 244 6.419413 GCTAGTTTCTCCGTAGATTGATCTTG 59.581 42.308 0.00 0.00 38.32 3.02
245 246 3.735237 TCTCCGTAGATTGATCTTGCC 57.265 47.619 0.00 0.00 38.32 4.52
246 247 2.034685 TCTCCGTAGATTGATCTTGCCG 59.965 50.000 0.00 0.70 38.32 5.69
247 248 2.028876 TCCGTAGATTGATCTTGCCGA 58.971 47.619 0.00 0.00 38.32 5.54
248 249 2.628178 TCCGTAGATTGATCTTGCCGAT 59.372 45.455 0.00 0.00 38.32 4.18
249 250 2.733552 CCGTAGATTGATCTTGCCGATG 59.266 50.000 0.00 0.00 38.32 3.84
250 251 2.156504 CGTAGATTGATCTTGCCGATGC 59.843 50.000 0.00 0.00 38.32 3.91
251 252 1.224075 AGATTGATCTTGCCGATGCG 58.776 50.000 0.00 0.00 41.78 4.73
253 254 2.135139 GATTGATCTTGCCGATGCGTA 58.865 47.619 0.00 0.00 41.78 4.42
255 256 0.744281 TGATCTTGCCGATGCGTAGA 59.256 50.000 0.00 0.00 41.78 2.59
256 257 1.136110 TGATCTTGCCGATGCGTAGAA 59.864 47.619 0.00 0.00 41.78 2.10
258 259 2.309528 TCTTGCCGATGCGTAGAATT 57.690 45.000 0.00 0.00 41.78 2.17
259 260 2.627945 TCTTGCCGATGCGTAGAATTT 58.372 42.857 0.00 0.00 41.78 1.82
260 261 3.006940 TCTTGCCGATGCGTAGAATTTT 58.993 40.909 0.00 0.00 41.78 1.82
261 262 3.438781 TCTTGCCGATGCGTAGAATTTTT 59.561 39.130 0.00 0.00 41.78 1.94
282 283 7.414814 TTTTTAAAATTTCTGCAACGATCCC 57.585 32.000 0.55 0.00 0.00 3.85
283 284 3.592898 AAAATTTCTGCAACGATCCCC 57.407 42.857 0.00 0.00 0.00 4.81
284 285 2.214376 AATTTCTGCAACGATCCCCA 57.786 45.000 0.00 0.00 0.00 4.96
286 287 0.960364 TTTCTGCAACGATCCCCAGC 60.960 55.000 0.00 0.00 0.00 4.85
287 288 1.841302 TTCTGCAACGATCCCCAGCT 61.841 55.000 0.00 0.00 0.00 4.24
289 290 2.514824 GCAACGATCCCCAGCTCC 60.515 66.667 0.00 0.00 0.00 4.70
290 291 2.202932 CAACGATCCCCAGCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
291 292 4.162690 AACGATCCCCAGCTCCGC 62.163 66.667 0.00 0.00 0.00 5.54
294 295 4.247380 GATCCCCAGCTCCGCCTG 62.247 72.222 0.00 0.00 0.00 4.85
300 301 4.834453 CAGCTCCGCCTGCCTCTG 62.834 72.222 0.00 0.00 0.00 3.35
302 303 4.087892 GCTCCGCCTGCCTCTGAA 62.088 66.667 0.00 0.00 0.00 3.02
303 304 2.186384 CTCCGCCTGCCTCTGAAG 59.814 66.667 0.00 0.00 0.00 3.02
306 307 2.818714 CGCCTGCCTCTGAAGCTG 60.819 66.667 0.00 0.00 0.00 4.24
307 308 3.132801 GCCTGCCTCTGAAGCTGC 61.133 66.667 0.00 0.00 0.00 5.25
309 310 1.077644 CCTGCCTCTGAAGCTGCAT 60.078 57.895 0.00 0.00 32.53 3.96
310 311 1.096386 CCTGCCTCTGAAGCTGCATC 61.096 60.000 0.00 0.00 32.53 3.91
311 312 0.107606 CTGCCTCTGAAGCTGCATCT 60.108 55.000 6.43 0.00 32.53 2.90
312 313 0.392595 TGCCTCTGAAGCTGCATCTG 60.393 55.000 6.43 5.96 0.00 2.90
313 314 0.392729 GCCTCTGAAGCTGCATCTGT 60.393 55.000 6.43 0.00 0.00 3.41
314 315 1.949547 GCCTCTGAAGCTGCATCTGTT 60.950 52.381 6.43 0.00 0.00 3.16
315 316 1.738350 CCTCTGAAGCTGCATCTGTTG 59.262 52.381 6.43 4.16 0.00 3.33
316 317 2.424557 CTCTGAAGCTGCATCTGTTGT 58.575 47.619 6.43 0.00 0.00 3.32
317 318 2.148768 TCTGAAGCTGCATCTGTTGTG 58.851 47.619 6.43 0.00 0.00 3.33
318 319 1.199327 CTGAAGCTGCATCTGTTGTGG 59.801 52.381 6.43 0.00 0.00 4.17
319 320 0.109412 GAAGCTGCATCTGTTGTGGC 60.109 55.000 1.02 0.00 0.00 5.01
320 321 0.538977 AAGCTGCATCTGTTGTGGCT 60.539 50.000 1.02 0.00 37.05 4.75
321 322 0.959372 AGCTGCATCTGTTGTGGCTC 60.959 55.000 1.02 0.00 32.62 4.70
323 324 2.249557 CTGCATCTGTTGTGGCTCGC 62.250 60.000 0.00 0.00 0.00 5.03
325 326 1.975363 GCATCTGTTGTGGCTCGCTC 61.975 60.000 0.00 0.00 0.00 5.03
326 327 1.446792 ATCTGTTGTGGCTCGCTCG 60.447 57.895 0.00 0.00 0.00 5.03
327 328 3.782244 CTGTTGTGGCTCGCTCGC 61.782 66.667 0.00 0.00 0.00 5.03
354 355 3.204827 CCGCCGGCATTCTTGAGG 61.205 66.667 28.98 13.15 0.00 3.86
355 356 2.125147 CGCCGGCATTCTTGAGGA 60.125 61.111 28.98 0.00 0.00 3.71
358 359 2.176273 CCGGCATTCTTGAGGAGCG 61.176 63.158 0.00 0.00 0.00 5.03
359 360 2.817423 CGGCATTCTTGAGGAGCGC 61.817 63.158 0.00 0.00 0.00 5.92
361 362 1.712977 GGCATTCTTGAGGAGCGCTG 61.713 60.000 18.48 0.00 0.00 5.18
362 363 1.712977 GCATTCTTGAGGAGCGCTGG 61.713 60.000 18.48 0.00 0.00 4.85
363 364 1.451028 ATTCTTGAGGAGCGCTGGC 60.451 57.895 18.48 0.00 40.37 4.85
364 365 3.939837 TTCTTGAGGAGCGCTGGCG 62.940 63.158 18.48 10.80 46.35 5.69
365 366 4.749310 CTTGAGGAGCGCTGGCGT 62.749 66.667 18.48 1.78 46.35 5.68
366 367 4.742201 TTGAGGAGCGCTGGCGTC 62.742 66.667 18.48 13.53 46.35 5.19
375 376 4.479993 GCTGGCGTCCATGGCTCT 62.480 66.667 6.96 0.00 30.82 4.09
376 377 2.202987 CTGGCGTCCATGGCTCTC 60.203 66.667 6.96 0.00 30.82 3.20
377 378 4.147449 TGGCGTCCATGGCTCTCG 62.147 66.667 6.96 10.16 35.06 4.04
393 394 2.826287 CGCCTCCTCGAGCTCAGA 60.826 66.667 15.40 10.98 0.00 3.27
395 396 3.106552 CCTCCTCGAGCTCAGACG 58.893 66.667 15.40 0.00 0.00 4.18
396 397 2.407210 CTCCTCGAGCTCAGACGC 59.593 66.667 15.40 0.00 0.00 5.19
397 398 2.359975 TCCTCGAGCTCAGACGCA 60.360 61.111 15.40 0.00 0.00 5.24
398 399 1.927608 CTCCTCGAGCTCAGACGCAA 61.928 60.000 15.40 0.00 0.00 4.85
399 400 1.803519 CCTCGAGCTCAGACGCAAC 60.804 63.158 15.40 0.00 0.00 4.17
400 401 1.081175 CTCGAGCTCAGACGCAACA 60.081 57.895 15.40 0.00 0.00 3.33
401 402 0.664466 CTCGAGCTCAGACGCAACAA 60.664 55.000 15.40 0.00 0.00 2.83
403 404 1.215014 CGAGCTCAGACGCAACAACA 61.215 55.000 15.40 0.00 0.00 3.33
404 405 0.510359 GAGCTCAGACGCAACAACAG 59.490 55.000 9.40 0.00 0.00 3.16
405 406 0.104855 AGCTCAGACGCAACAACAGA 59.895 50.000 0.00 0.00 0.00 3.41
406 407 1.151668 GCTCAGACGCAACAACAGAT 58.848 50.000 0.00 0.00 0.00 2.90
408 409 2.031682 GCTCAGACGCAACAACAGATTT 60.032 45.455 0.00 0.00 0.00 2.17
409 410 3.548587 CTCAGACGCAACAACAGATTTG 58.451 45.455 0.00 0.00 0.00 2.32
410 411 2.942376 TCAGACGCAACAACAGATTTGT 59.058 40.909 0.00 0.00 39.87 2.83
425 426 7.846644 ACAGATTTGTTGCAATTTTTGAAGA 57.153 28.000 0.59 0.00 32.28 2.87
426 427 8.441312 ACAGATTTGTTGCAATTTTTGAAGAT 57.559 26.923 0.59 0.00 32.28 2.40
427 428 8.553696 ACAGATTTGTTGCAATTTTTGAAGATC 58.446 29.630 0.59 0.00 32.28 2.75
428 429 8.770828 CAGATTTGTTGCAATTTTTGAAGATCT 58.229 29.630 0.59 0.00 0.00 2.75
429 430 9.333724 AGATTTGTTGCAATTTTTGAAGATCTT 57.666 25.926 7.95 7.95 0.00 2.40
430 431 9.377383 GATTTGTTGCAATTTTTGAAGATCTTG 57.623 29.630 14.00 0.00 0.00 3.02
431 432 7.846644 TTGTTGCAATTTTTGAAGATCTTGT 57.153 28.000 14.00 0.00 0.00 3.16
432 433 7.846644 TGTTGCAATTTTTGAAGATCTTGTT 57.153 28.000 14.00 0.00 0.00 2.83
433 434 7.686519 TGTTGCAATTTTTGAAGATCTTGTTG 58.313 30.769 14.00 8.82 0.00 3.33
434 435 6.289745 TGCAATTTTTGAAGATCTTGTTGC 57.710 33.333 14.00 17.07 39.69 4.17
435 436 5.816258 TGCAATTTTTGAAGATCTTGTTGCA 59.184 32.000 14.00 19.05 44.68 4.08
436 437 6.483974 TGCAATTTTTGAAGATCTTGTTGCAT 59.516 30.769 14.00 0.00 42.83 3.96
437 438 7.012515 TGCAATTTTTGAAGATCTTGTTGCATT 59.987 29.630 14.00 3.08 42.83 3.56
438 439 7.858879 GCAATTTTTGAAGATCTTGTTGCATTT 59.141 29.630 14.00 0.00 39.22 2.32
439 440 9.724839 CAATTTTTGAAGATCTTGTTGCATTTT 57.275 25.926 14.00 0.00 0.00 1.82
441 442 9.940166 ATTTTTGAAGATCTTGTTGCATTTTTC 57.060 25.926 14.00 0.00 0.00 2.29
442 443 6.752335 TTGAAGATCTTGTTGCATTTTTCG 57.248 33.333 14.00 0.00 0.00 3.46
443 444 5.830912 TGAAGATCTTGTTGCATTTTTCGT 58.169 33.333 14.00 0.00 0.00 3.85
444 445 6.964908 TGAAGATCTTGTTGCATTTTTCGTA 58.035 32.000 14.00 0.00 0.00 3.43
445 446 7.421599 TGAAGATCTTGTTGCATTTTTCGTAA 58.578 30.769 14.00 0.00 0.00 3.18
446 447 7.378461 TGAAGATCTTGTTGCATTTTTCGTAAC 59.622 33.333 14.00 0.00 0.00 2.50
447 448 6.734137 AGATCTTGTTGCATTTTTCGTAACA 58.266 32.000 0.00 0.00 37.22 2.41
448 449 7.199766 AGATCTTGTTGCATTTTTCGTAACAA 58.800 30.769 6.43 6.43 43.61 2.83
449 450 7.867403 AGATCTTGTTGCATTTTTCGTAACAAT 59.133 29.630 6.94 0.00 44.35 2.71
450 451 7.763172 TCTTGTTGCATTTTTCGTAACAATT 57.237 28.000 6.94 0.00 44.35 2.32
451 452 7.616673 TCTTGTTGCATTTTTCGTAACAATTG 58.383 30.769 3.24 3.24 44.35 2.32
452 453 6.893958 TGTTGCATTTTTCGTAACAATTGT 57.106 29.167 4.92 4.92 36.27 2.71
453 454 6.927746 TGTTGCATTTTTCGTAACAATTGTC 58.072 32.000 12.39 0.00 36.27 3.18
454 455 6.754209 TGTTGCATTTTTCGTAACAATTGTCT 59.246 30.769 12.39 5.12 36.27 3.41
455 456 7.915923 TGTTGCATTTTTCGTAACAATTGTCTA 59.084 29.630 12.39 4.14 36.27 2.59
456 457 8.417176 GTTGCATTTTTCGTAACAATTGTCTAG 58.583 33.333 12.39 6.20 0.00 2.43
457 458 7.644490 TGCATTTTTCGTAACAATTGTCTAGT 58.356 30.769 12.39 0.00 0.00 2.57
458 459 8.132362 TGCATTTTTCGTAACAATTGTCTAGTT 58.868 29.630 12.39 0.00 0.00 2.24
459 460 8.417176 GCATTTTTCGTAACAATTGTCTAGTTG 58.583 33.333 12.39 3.06 0.00 3.16
460 461 7.901874 TTTTTCGTAACAATTGTCTAGTTGC 57.098 32.000 12.39 0.00 0.00 4.17
461 462 6.606234 TTTCGTAACAATTGTCTAGTTGCA 57.394 33.333 12.39 0.00 0.00 4.08
462 463 5.839262 TCGTAACAATTGTCTAGTTGCAG 57.161 39.130 12.39 0.00 0.00 4.41
463 464 5.534407 TCGTAACAATTGTCTAGTTGCAGA 58.466 37.500 12.39 0.00 0.00 4.26
464 465 5.986741 TCGTAACAATTGTCTAGTTGCAGAA 59.013 36.000 12.39 0.00 0.00 3.02
465 466 6.480651 TCGTAACAATTGTCTAGTTGCAGAAA 59.519 34.615 12.39 0.00 0.00 2.52
466 467 7.011576 TCGTAACAATTGTCTAGTTGCAGAAAA 59.988 33.333 12.39 0.00 0.00 2.29
467 468 7.803189 CGTAACAATTGTCTAGTTGCAGAAAAT 59.197 33.333 12.39 0.00 34.53 1.82
468 469 9.463443 GTAACAATTGTCTAGTTGCAGAAAATT 57.537 29.630 12.39 0.00 41.26 1.82
470 471 9.683069 AACAATTGTCTAGTTGCAGAAAATTAG 57.317 29.630 12.39 1.64 39.45 1.73
471 472 9.066892 ACAATTGTCTAGTTGCAGAAAATTAGA 57.933 29.630 4.92 0.00 39.45 2.10
472 473 9.334693 CAATTGTCTAGTTGCAGAAAATTAGAC 57.665 33.333 10.35 10.35 39.45 2.59
473 474 6.706055 TGTCTAGTTGCAGAAAATTAGACG 57.294 37.500 11.78 0.00 38.68 4.18
474 475 5.120208 TGTCTAGTTGCAGAAAATTAGACGC 59.880 40.000 11.78 0.00 38.68 5.19
475 476 3.455619 AGTTGCAGAAAATTAGACGCG 57.544 42.857 3.53 3.53 0.00 6.01
476 477 3.064207 AGTTGCAGAAAATTAGACGCGA 58.936 40.909 15.93 0.00 0.00 5.87
477 478 3.120649 AGTTGCAGAAAATTAGACGCGAC 60.121 43.478 15.93 6.86 34.62 5.19
478 479 1.388768 TGCAGAAAATTAGACGCGACG 59.611 47.619 15.93 0.00 0.00 5.12
479 480 1.389106 GCAGAAAATTAGACGCGACGT 59.611 47.619 15.93 4.60 45.10 4.34
480 481 2.595536 GCAGAAAATTAGACGCGACGTA 59.404 45.455 15.93 0.00 41.37 3.57
481 482 3.059834 GCAGAAAATTAGACGCGACGTAA 59.940 43.478 15.93 7.60 41.37 3.18
482 483 4.775083 GCAGAAAATTAGACGCGACGTAAG 60.775 45.833 15.93 0.00 41.37 2.34
483 484 4.556135 CAGAAAATTAGACGCGACGTAAGA 59.444 41.667 15.93 0.00 41.37 2.10
484 485 5.229469 CAGAAAATTAGACGCGACGTAAGAT 59.771 40.000 15.93 0.00 41.37 2.40
485 486 5.229469 AGAAAATTAGACGCGACGTAAGATG 59.771 40.000 15.93 0.00 41.37 2.90
486 487 3.687572 ATTAGACGCGACGTAAGATGT 57.312 42.857 15.93 0.00 41.37 3.06
487 488 3.476295 TTAGACGCGACGTAAGATGTT 57.524 42.857 15.93 0.00 41.37 2.71
488 489 1.614385 AGACGCGACGTAAGATGTTG 58.386 50.000 15.93 0.00 41.37 3.33
489 490 1.068748 AGACGCGACGTAAGATGTTGT 60.069 47.619 15.93 0.00 41.37 3.32
490 491 1.717645 GACGCGACGTAAGATGTTGTT 59.282 47.619 15.93 0.00 41.37 2.83
491 492 1.454276 ACGCGACGTAAGATGTTGTTG 59.546 47.619 15.93 0.00 38.73 3.33
492 493 1.782023 CGCGACGTAAGATGTTGTTGC 60.782 52.381 0.00 0.00 43.62 4.17
493 494 1.193650 GCGACGTAAGATGTTGTTGCA 59.806 47.619 0.00 0.00 40.63 4.08
494 495 2.349060 GCGACGTAAGATGTTGTTGCAA 60.349 45.455 0.00 0.00 40.63 4.08
495 496 3.666902 GCGACGTAAGATGTTGTTGCAAT 60.667 43.478 0.59 0.00 40.63 3.56
496 497 4.463209 CGACGTAAGATGTTGTTGCAATT 58.537 39.130 0.59 0.00 43.62 2.32
497 498 4.909305 CGACGTAAGATGTTGTTGCAATTT 59.091 37.500 0.59 0.00 43.62 1.82
498 499 5.164292 CGACGTAAGATGTTGTTGCAATTTG 60.164 40.000 0.59 0.00 43.62 2.32
499 500 5.587289 ACGTAAGATGTTGTTGCAATTTGT 58.413 33.333 0.59 0.00 43.62 2.83
500 501 6.039616 ACGTAAGATGTTGTTGCAATTTGTT 58.960 32.000 0.59 0.00 43.62 2.83
501 502 6.533367 ACGTAAGATGTTGTTGCAATTTGTTT 59.467 30.769 0.59 0.00 43.62 2.83
502 503 7.702772 ACGTAAGATGTTGTTGCAATTTGTTTA 59.297 29.630 0.59 0.00 43.62 2.01
503 504 8.535592 CGTAAGATGTTGTTGCAATTTGTTTAA 58.464 29.630 0.59 0.00 43.02 1.52
507 508 9.771915 AGATGTTGTTGCAATTTGTTTAAAAAG 57.228 25.926 0.59 0.00 0.00 2.27
508 509 9.766277 GATGTTGTTGCAATTTGTTTAAAAAGA 57.234 25.926 0.59 0.00 0.00 2.52
510 511 9.766277 TGTTGTTGCAATTTGTTTAAAAAGATC 57.234 25.926 0.59 0.00 0.00 2.75
511 512 9.220635 GTTGTTGCAATTTGTTTAAAAAGATCC 57.779 29.630 0.59 0.00 0.00 3.36
512 513 8.498054 TGTTGCAATTTGTTTAAAAAGATCCA 57.502 26.923 0.59 0.00 0.00 3.41
513 514 8.394121 TGTTGCAATTTGTTTAAAAAGATCCAC 58.606 29.630 0.59 0.00 0.00 4.02
514 515 7.489574 TGCAATTTGTTTAAAAAGATCCACC 57.510 32.000 0.00 0.00 0.00 4.61
515 516 6.201806 TGCAATTTGTTTAAAAAGATCCACCG 59.798 34.615 0.00 0.00 0.00 4.94
516 517 6.422400 GCAATTTGTTTAAAAAGATCCACCGA 59.578 34.615 0.00 0.00 0.00 4.69
517 518 7.568679 GCAATTTGTTTAAAAAGATCCACCGAC 60.569 37.037 0.00 0.00 0.00 4.79
518 519 5.441709 TTGTTTAAAAAGATCCACCGACC 57.558 39.130 0.00 0.00 0.00 4.79
519 520 3.499157 TGTTTAAAAAGATCCACCGACCG 59.501 43.478 0.00 0.00 0.00 4.79
520 521 3.681593 TTAAAAAGATCCACCGACCGA 57.318 42.857 0.00 0.00 0.00 4.69
521 522 1.804601 AAAAAGATCCACCGACCGAC 58.195 50.000 0.00 0.00 0.00 4.79
522 523 0.389426 AAAAGATCCACCGACCGACG 60.389 55.000 0.00 0.00 42.18 5.12
523 524 2.830704 AAAGATCCACCGACCGACGC 62.831 60.000 0.00 0.00 41.07 5.19
527 528 4.824166 CCACCGACCGACGCGTAG 62.824 72.222 13.97 13.30 41.07 3.51
528 529 4.093952 CACCGACCGACGCGTAGT 62.094 66.667 13.97 13.81 41.07 2.73
529 530 2.434185 ACCGACCGACGCGTAGTA 60.434 61.111 13.97 0.00 41.07 1.82
530 531 2.322422 CCGACCGACGCGTAGTAG 59.678 66.667 13.97 13.33 41.07 2.57
531 532 2.350537 CGACCGACGCGTAGTAGC 60.351 66.667 13.97 0.00 34.51 3.58
532 533 2.023882 GACCGACGCGTAGTAGCC 59.976 66.667 13.97 0.00 0.00 3.93
533 534 3.460854 GACCGACGCGTAGTAGCCC 62.461 68.421 13.97 0.00 0.00 5.19
534 535 4.261781 CCGACGCGTAGTAGCCCC 62.262 72.222 13.97 0.00 0.00 5.80
535 536 4.261781 CGACGCGTAGTAGCCCCC 62.262 72.222 13.97 0.00 0.00 5.40
536 537 4.261781 GACGCGTAGTAGCCCCCG 62.262 72.222 13.97 0.00 0.00 5.73
538 539 4.261781 CGCGTAGTAGCCCCCGTC 62.262 72.222 0.00 0.00 0.00 4.79
539 540 4.261781 GCGTAGTAGCCCCCGTCG 62.262 72.222 0.00 0.00 0.00 5.12
540 541 2.825836 CGTAGTAGCCCCCGTCGT 60.826 66.667 0.00 0.00 0.00 4.34
541 542 1.523711 CGTAGTAGCCCCCGTCGTA 60.524 63.158 0.00 0.00 0.00 3.43
542 543 0.886490 CGTAGTAGCCCCCGTCGTAT 60.886 60.000 0.00 0.00 0.00 3.06
543 544 1.322442 GTAGTAGCCCCCGTCGTATT 58.678 55.000 0.00 0.00 0.00 1.89
544 545 2.504367 GTAGTAGCCCCCGTCGTATTA 58.496 52.381 0.00 0.00 0.00 0.98
545 546 1.322442 AGTAGCCCCCGTCGTATTAC 58.678 55.000 0.00 0.00 0.00 1.89
546 547 1.133668 AGTAGCCCCCGTCGTATTACT 60.134 52.381 0.00 0.00 0.00 2.24
547 548 1.000938 GTAGCCCCCGTCGTATTACTG 60.001 57.143 0.00 0.00 0.00 2.74
548 549 1.593479 GCCCCCGTCGTATTACTGC 60.593 63.158 0.00 0.00 0.00 4.40
549 550 1.817881 CCCCCGTCGTATTACTGCA 59.182 57.895 0.00 0.00 0.00 4.41
550 551 0.176219 CCCCCGTCGTATTACTGCAA 59.824 55.000 0.00 0.00 0.00 4.08
551 552 1.405797 CCCCCGTCGTATTACTGCAAA 60.406 52.381 0.00 0.00 0.00 3.68
552 553 2.557317 CCCCGTCGTATTACTGCAAAT 58.443 47.619 0.00 0.00 0.00 2.32
553 554 2.940410 CCCCGTCGTATTACTGCAAATT 59.060 45.455 0.00 0.00 0.00 1.82
554 555 3.242608 CCCCGTCGTATTACTGCAAATTG 60.243 47.826 0.00 0.00 0.00 2.32
555 556 3.350912 CCGTCGTATTACTGCAAATTGC 58.649 45.455 11.58 11.58 45.29 3.56
556 557 3.350912 CGTCGTATTACTGCAAATTGCC 58.649 45.455 15.98 0.00 44.23 4.52
557 558 3.691498 GTCGTATTACTGCAAATTGCCC 58.309 45.455 15.98 0.00 44.23 5.36
558 559 2.685897 TCGTATTACTGCAAATTGCCCC 59.314 45.455 15.98 0.00 44.23 5.80
559 560 2.540769 CGTATTACTGCAAATTGCCCCG 60.541 50.000 15.98 6.49 44.23 5.73
560 561 0.175531 ATTACTGCAAATTGCCCCGC 59.824 50.000 15.98 0.00 44.23 6.13
561 562 1.181741 TTACTGCAAATTGCCCCGCA 61.182 50.000 15.98 0.00 44.23 5.69
570 571 2.814023 TTGCCCCGCAAAAGAAAGA 58.186 47.368 0.00 0.00 45.96 2.52
571 572 1.337118 TTGCCCCGCAAAAGAAAGAT 58.663 45.000 0.00 0.00 45.96 2.40
572 573 2.208132 TGCCCCGCAAAAGAAAGATA 57.792 45.000 0.00 0.00 34.76 1.98
573 574 2.733956 TGCCCCGCAAAAGAAAGATAT 58.266 42.857 0.00 0.00 34.76 1.63
574 575 3.096092 TGCCCCGCAAAAGAAAGATATT 58.904 40.909 0.00 0.00 34.76 1.28
575 576 4.274147 TGCCCCGCAAAAGAAAGATATTA 58.726 39.130 0.00 0.00 34.76 0.98
576 577 4.097286 TGCCCCGCAAAAGAAAGATATTAC 59.903 41.667 0.00 0.00 34.76 1.89
577 578 4.338400 GCCCCGCAAAAGAAAGATATTACT 59.662 41.667 0.00 0.00 0.00 2.24
578 579 5.529800 GCCCCGCAAAAGAAAGATATTACTA 59.470 40.000 0.00 0.00 0.00 1.82
579 580 6.512903 GCCCCGCAAAAGAAAGATATTACTAC 60.513 42.308 0.00 0.00 0.00 2.73
580 581 6.766467 CCCCGCAAAAGAAAGATATTACTACT 59.234 38.462 0.00 0.00 0.00 2.57
581 582 7.282450 CCCCGCAAAAGAAAGATATTACTACTT 59.718 37.037 0.00 0.00 0.00 2.24
582 583 8.122952 CCCGCAAAAGAAAGATATTACTACTTG 58.877 37.037 0.00 0.00 0.00 3.16
583 584 7.640240 CCGCAAAAGAAAGATATTACTACTTGC 59.360 37.037 0.00 0.00 32.77 4.01
584 585 8.175069 CGCAAAAGAAAGATATTACTACTTGCA 58.825 33.333 0.00 0.00 34.23 4.08
585 586 9.840427 GCAAAAGAAAGATATTACTACTTGCAA 57.160 29.630 0.00 0.00 34.48 4.08
624 625 8.546597 AAAAGAAAGTACTTGCAAATTGTGTT 57.453 26.923 16.18 0.00 0.00 3.32
625 626 9.646427 AAAAGAAAGTACTTGCAAATTGTGTTA 57.354 25.926 16.18 0.00 0.00 2.41
626 627 9.816354 AAAGAAAGTACTTGCAAATTGTGTTAT 57.184 25.926 16.18 0.00 0.00 1.89
730 733 1.003928 GGGCCTATAAATACCCACCCG 59.996 57.143 0.84 0.00 42.33 5.28
736 739 2.596553 TAAATACCCACCCGCCGCAG 62.597 60.000 0.00 0.00 0.00 5.18
760 763 4.764771 TCTGTCCCCCGTACCCCG 62.765 72.222 0.00 0.00 0.00 5.73
769 772 2.026590 CGTACCCCGTCCGCATAC 59.973 66.667 0.00 0.00 0.00 2.39
897 903 1.004927 CACCGCGGATTTCGAATTCTC 60.005 52.381 35.90 7.07 42.43 2.87
1110 1143 3.450115 CCCGTCCCCGTCTCTCAC 61.450 72.222 0.00 0.00 0.00 3.51
1456 1491 3.515502 TGTAGAGGTTGGGTTCAGATGAG 59.484 47.826 0.00 0.00 0.00 2.90
1463 1498 4.223032 GGTTGGGTTCAGATGAGAAGTAGA 59.777 45.833 0.00 0.00 0.00 2.59
1467 1502 7.921041 TGGGTTCAGATGAGAAGTAGATATT 57.079 36.000 0.00 0.00 0.00 1.28
1493 1537 4.212636 GGTTATCCGGGTCATAATTTGTCG 59.787 45.833 0.00 0.00 0.00 4.35
1500 1544 2.223377 GGTCATAATTTGTCGCCGGATC 59.777 50.000 5.05 0.00 0.00 3.36
1564 1609 5.555631 GCATATGCATGAAACTTTGAATGCG 60.556 40.000 22.84 0.00 46.64 4.73
1569 1614 4.208873 GCATGAAACTTTGAATGCGAAACA 59.791 37.500 0.00 0.00 36.41 2.83
1583 1628 1.801771 CGAAACAACAGCGGGTTCATA 59.198 47.619 0.00 0.00 37.72 2.15
1640 1908 1.603455 CCCGACACCATGCCAAGTT 60.603 57.895 0.00 0.00 0.00 2.66
1645 1913 1.670811 GACACCATGCCAAGTTATCCG 59.329 52.381 0.00 0.00 0.00 4.18
1658 1926 0.519519 TTATCCGCTTTGTGCCAACG 59.480 50.000 0.00 0.00 38.78 4.10
1688 1956 1.201921 CCGTGCAGCGTGTTCTAATTC 60.202 52.381 7.68 0.00 39.32 2.17
1704 1972 3.757745 AATTCGCTGGACATTTTACCG 57.242 42.857 0.00 0.00 0.00 4.02
1705 1973 1.444836 TTCGCTGGACATTTTACCGG 58.555 50.000 0.00 0.00 35.81 5.28
1712 1987 1.400500 GGACATTTTACCGGTGTTGCG 60.400 52.381 19.93 5.42 0.00 4.85
1726 2001 2.925262 TTGCGTTTTGGGGGCGATG 61.925 57.895 0.00 0.00 0.00 3.84
1737 2012 1.372872 GGGCGATGGTGTTTTGTGC 60.373 57.895 0.00 0.00 0.00 4.57
1745 2020 0.455410 GGTGTTTTGTGCTGTGCTCA 59.545 50.000 0.00 0.00 0.00 4.26
1750 2025 4.803088 GTGTTTTGTGCTGTGCTCATTTTA 59.197 37.500 0.00 0.00 32.16 1.52
1751 2026 5.290643 GTGTTTTGTGCTGTGCTCATTTTAA 59.709 36.000 0.00 0.00 32.16 1.52
1763 2038 7.172342 TGTGCTCATTTTAACTACCCAAGTAT 58.828 34.615 0.00 0.00 37.50 2.12
1805 2081 2.037251 TGTACTCTGCCTTCTGGTGTTC 59.963 50.000 0.00 0.00 35.27 3.18
1852 2128 2.080286 CGGTCAACCTGGACTGTAAG 57.920 55.000 0.00 0.00 38.96 2.34
1964 2240 6.983890 TGTTTTTGTTTTCTCTTATTGGGCTC 59.016 34.615 0.00 0.00 0.00 4.70
1968 2244 3.652057 TTTCTCTTATTGGGCTCCTGG 57.348 47.619 0.00 0.00 0.00 4.45
1976 2252 1.819753 TTGGGCTCCTGGTGCTATAT 58.180 50.000 19.07 0.00 0.00 0.86
1979 2255 3.322862 TGGGCTCCTGGTGCTATATTTA 58.677 45.455 19.07 0.00 0.00 1.40
1980 2256 3.719479 TGGGCTCCTGGTGCTATATTTAA 59.281 43.478 19.07 0.00 0.00 1.52
1982 2258 4.762251 GGGCTCCTGGTGCTATATTTAAAG 59.238 45.833 19.07 0.00 0.00 1.85
1983 2259 4.762251 GGCTCCTGGTGCTATATTTAAAGG 59.238 45.833 19.07 0.00 0.00 3.11
1984 2260 5.377478 GCTCCTGGTGCTATATTTAAAGGT 58.623 41.667 13.24 0.00 0.00 3.50
1985 2261 5.828328 GCTCCTGGTGCTATATTTAAAGGTT 59.172 40.000 13.24 0.00 0.00 3.50
1986 2262 6.321435 GCTCCTGGTGCTATATTTAAAGGTTT 59.679 38.462 13.24 0.00 0.00 3.27
1987 2263 7.147897 GCTCCTGGTGCTATATTTAAAGGTTTT 60.148 37.037 13.24 0.00 0.00 2.43
1988 2264 8.062065 TCCTGGTGCTATATTTAAAGGTTTTG 57.938 34.615 0.00 0.00 0.00 2.44
1989 2265 7.672239 TCCTGGTGCTATATTTAAAGGTTTTGT 59.328 33.333 0.00 0.00 0.00 2.83
1990 2266 7.759433 CCTGGTGCTATATTTAAAGGTTTTGTG 59.241 37.037 0.00 0.00 0.00 3.33
1993 2269 9.869757 GGTGCTATATTTAAAGGTTTTGTGAAT 57.130 29.630 0.00 0.00 0.00 2.57
2006 2282 7.803724 AGGTTTTGTGAATATTTAGTGTCGTC 58.196 34.615 0.00 0.00 0.00 4.20
2007 2283 7.660208 AGGTTTTGTGAATATTTAGTGTCGTCT 59.340 33.333 0.00 0.00 0.00 4.18
2008 2284 7.744715 GGTTTTGTGAATATTTAGTGTCGTCTG 59.255 37.037 0.00 0.00 0.00 3.51
2021 2297 3.802685 GTGTCGTCTGGTGCTATATTTCC 59.197 47.826 0.00 0.00 0.00 3.13
2028 2304 5.353123 GTCTGGTGCTATATTTCCGAAAACA 59.647 40.000 0.00 0.00 0.00 2.83
2049 2325 6.655078 ACATCCAAGTTTTATCACTTTGCT 57.345 33.333 0.00 0.00 34.60 3.91
2050 2326 7.054491 ACATCCAAGTTTTATCACTTTGCTT 57.946 32.000 0.00 0.00 34.60 3.91
2051 2327 7.500141 ACATCCAAGTTTTATCACTTTGCTTT 58.500 30.769 0.00 0.00 34.60 3.51
2052 2328 7.439056 ACATCCAAGTTTTATCACTTTGCTTTG 59.561 33.333 0.00 0.00 34.60 2.77
2053 2329 5.752955 TCCAAGTTTTATCACTTTGCTTTGC 59.247 36.000 0.00 0.00 34.60 3.68
2115 2405 1.079819 CTGCTGTGTAGACGGTGGG 60.080 63.158 0.22 0.00 0.00 4.61
2171 2465 3.288092 GTTCTTTTGTGGACCCTTCTGT 58.712 45.455 0.00 0.00 0.00 3.41
2179 2473 3.137544 TGTGGACCCTTCTGTATTTGTGT 59.862 43.478 0.00 0.00 0.00 3.72
2394 2704 8.515473 AAATAAAGTCGATGCTGTTTAAAACC 57.485 30.769 0.00 0.00 0.00 3.27
2400 2710 2.880963 TGCTGTTTAAAACCTGCACC 57.119 45.000 6.36 0.00 35.82 5.01
2406 2716 5.182380 GCTGTTTAAAACCTGCACCTGTATA 59.818 40.000 0.00 0.00 32.55 1.47
2491 2801 7.823799 GGTGAAAACAAATAATTGGACCATGAT 59.176 33.333 0.00 0.00 41.01 2.45
2522 2833 3.216800 TGTCTTTTGCTGTTCTGATGCT 58.783 40.909 0.00 0.00 0.00 3.79
2525 2836 3.633525 TCTTTTGCTGTTCTGATGCTTGT 59.366 39.130 0.00 0.00 0.00 3.16
2530 2841 5.710513 TGCTGTTCTGATGCTTGTAAATT 57.289 34.783 0.00 0.00 0.00 1.82
2552 2863 9.520204 AAATTTGTTCAGCAGCATATATGTTAC 57.480 29.630 14.14 3.21 0.00 2.50
2694 3005 6.877322 TCATGTACATCTGATGCAGAATATGG 59.123 38.462 17.24 0.00 44.04 2.74
2729 3044 7.122055 AGTTTGATTATTTAATGGCGTTGGAGA 59.878 33.333 1.27 0.00 0.00 3.71
2806 3121 6.246919 TGAAATTCAATGCAAATTCCCCATT 58.753 32.000 0.00 0.00 0.00 3.16
2842 3157 3.088532 AGGGTTCGCTGCATATTTTTCA 58.911 40.909 0.00 0.00 0.00 2.69
2882 3197 9.793259 TCAGAATTAAACCTTTTCACTCAGTAT 57.207 29.630 0.00 0.00 0.00 2.12
2894 3209 9.103861 CTTTTCACTCAGTATAAAAGATCCTCC 57.896 37.037 15.12 0.00 39.97 4.30
2902 3217 9.929180 TCAGTATAAAAGATCCTCCAAATATCG 57.071 33.333 0.00 0.00 0.00 2.92
2910 3225 5.600484 AGATCCTCCAAATATCGTCTTCAGT 59.400 40.000 0.00 0.00 0.00 3.41
2963 3278 7.767659 TGAGATTGGATTGATACTTGAGTTCAG 59.232 37.037 0.00 0.00 0.00 3.02
3013 3340 6.279882 TCACTTTAATGGAAACCTGCAAAAG 58.720 36.000 0.00 0.00 0.00 2.27
3034 3361 3.319122 AGTGTTTTGATTCAGTGGCCTTC 59.681 43.478 3.32 0.00 0.00 3.46
3035 3362 3.319122 GTGTTTTGATTCAGTGGCCTTCT 59.681 43.478 3.32 0.00 0.00 2.85
3036 3363 3.318839 TGTTTTGATTCAGTGGCCTTCTG 59.681 43.478 18.09 18.09 0.00 3.02
3037 3364 2.205022 TTGATTCAGTGGCCTTCTGG 57.795 50.000 21.82 9.04 34.15 3.86
3038 3365 0.329261 TGATTCAGTGGCCTTCTGGG 59.671 55.000 21.82 4.70 34.15 4.45
3040 3367 1.004745 GATTCAGTGGCCTTCTGGGAA 59.995 52.381 21.82 13.60 37.23 3.97
3042 3369 0.401738 TCAGTGGCCTTCTGGGAAAG 59.598 55.000 21.82 2.99 37.23 2.62
3044 3371 0.111253 AGTGGCCTTCTGGGAAAGTG 59.889 55.000 3.32 0.00 37.23 3.16
3045 3372 0.110486 GTGGCCTTCTGGGAAAGTGA 59.890 55.000 3.32 0.00 37.23 3.41
3085 3425 5.394663 CCAGAGAGTTATGGTCTTAGTGGTG 60.395 48.000 0.00 0.00 30.85 4.17
3194 3534 4.473477 ACTCGCAGCTAGAAAGGTATTT 57.527 40.909 0.00 0.00 0.00 1.40
3282 3622 7.985184 TCCTGTTTTCAGTATGCTCGTATAATT 59.015 33.333 0.00 0.00 45.68 1.40
3294 3634 5.050490 GCTCGTATAATTCAGAAGCTTGGA 58.950 41.667 2.10 0.00 0.00 3.53
3393 3733 5.270083 TGCTGAACGTTTGTTAATTCTGTG 58.730 37.500 0.46 0.00 38.78 3.66
3528 3868 5.894807 AGTTGAATTCTGTGGTTTCTGTTG 58.105 37.500 7.05 0.00 0.00 3.33
3567 3907 4.921515 GTGCGGTATTTTTCTTTCTTTCCC 59.078 41.667 0.00 0.00 0.00 3.97
3761 4101 2.035783 GGCCCTGTGGGTTTCTCC 59.964 66.667 4.42 0.00 46.51 3.71
3825 4165 4.020543 AGGTGAGAGAAGAGACATACACC 58.979 47.826 0.00 0.00 44.36 4.16
3898 4238 6.128063 GCAATGATGGTATAATTCCTGAGAGC 60.128 42.308 0.00 0.00 0.00 4.09
3912 4252 2.016318 TGAGAGCGCATGTTTAATGGG 58.984 47.619 11.47 0.00 35.41 4.00
4078 4418 4.631813 AGCGGCTACTTTCAGAAACTAATG 59.368 41.667 0.00 0.00 0.00 1.90
4082 4422 5.392057 GGCTACTTTCAGAAACTAATGGTGC 60.392 44.000 0.00 0.00 0.00 5.01
4083 4423 4.749245 ACTTTCAGAAACTAATGGTGCG 57.251 40.909 0.00 0.00 0.00 5.34
4084 4424 4.134563 ACTTTCAGAAACTAATGGTGCGT 58.865 39.130 0.00 0.00 0.00 5.24
4085 4425 4.024048 ACTTTCAGAAACTAATGGTGCGTG 60.024 41.667 0.00 0.00 0.00 5.34
4089 4429 1.582610 AAACTAATGGTGCGTGCGGG 61.583 55.000 0.00 0.00 0.00 6.13
4126 4466 3.211045 GTGCAGGTGACTTTGGAAGTAA 58.789 45.455 0.00 0.00 43.03 2.24
4141 4481 5.003804 TGGAAGTAAAGCAGAATTGGAGAC 58.996 41.667 0.00 0.00 0.00 3.36
4170 4510 2.435586 CTGCCAGCTCCAACCTCG 60.436 66.667 0.00 0.00 0.00 4.63
4306 4647 1.210234 TCATGGTTGATCATCGCAGGT 59.790 47.619 0.00 0.00 0.00 4.00
4307 4648 2.433970 TCATGGTTGATCATCGCAGGTA 59.566 45.455 0.00 0.00 0.00 3.08
4309 4650 3.111853 TGGTTGATCATCGCAGGTATC 57.888 47.619 0.00 0.00 0.00 2.24
4310 4651 2.433970 TGGTTGATCATCGCAGGTATCA 59.566 45.455 0.00 0.00 0.00 2.15
4313 4654 3.221964 TGATCATCGCAGGTATCATCG 57.778 47.619 0.00 0.00 0.00 3.84
4314 4655 1.923204 GATCATCGCAGGTATCATCGC 59.077 52.381 0.00 0.00 0.00 4.58
4315 4656 0.673437 TCATCGCAGGTATCATCGCA 59.327 50.000 0.00 0.00 0.00 5.10
4316 4657 1.066136 CATCGCAGGTATCATCGCAG 58.934 55.000 0.00 0.00 0.00 5.18
4317 4658 0.037882 ATCGCAGGTATCATCGCAGG 60.038 55.000 0.00 0.00 0.00 4.85
4318 4659 1.068083 CGCAGGTATCATCGCAGGT 59.932 57.895 0.00 0.00 0.00 4.00
4319 4660 0.941463 CGCAGGTATCATCGCAGGTC 60.941 60.000 0.00 0.00 0.00 3.85
4320 4661 0.390860 GCAGGTATCATCGCAGGTCT 59.609 55.000 0.00 0.00 0.00 3.85
4321 4662 1.613925 GCAGGTATCATCGCAGGTCTA 59.386 52.381 0.00 0.00 0.00 2.59
4322 4663 2.232452 GCAGGTATCATCGCAGGTCTAT 59.768 50.000 0.00 0.00 0.00 1.98
4323 4664 3.306364 GCAGGTATCATCGCAGGTCTATT 60.306 47.826 0.00 0.00 0.00 1.73
4324 4665 4.489810 CAGGTATCATCGCAGGTCTATTC 58.510 47.826 0.00 0.00 0.00 1.75
4325 4666 4.219507 CAGGTATCATCGCAGGTCTATTCT 59.780 45.833 0.00 0.00 0.00 2.40
4326 4667 4.219507 AGGTATCATCGCAGGTCTATTCTG 59.780 45.833 0.00 0.00 35.49 3.02
4327 4668 4.021894 GGTATCATCGCAGGTCTATTCTGT 60.022 45.833 0.00 0.00 34.89 3.41
4328 4669 3.717400 TCATCGCAGGTCTATTCTGTC 57.283 47.619 0.00 0.00 34.89 3.51
4329 4670 3.023832 TCATCGCAGGTCTATTCTGTCA 58.976 45.455 0.00 0.00 34.89 3.58
4330 4671 3.638627 TCATCGCAGGTCTATTCTGTCAT 59.361 43.478 0.00 0.00 34.89 3.06
4331 4672 3.443099 TCGCAGGTCTATTCTGTCATG 57.557 47.619 0.00 0.00 34.89 3.07
4332 4673 2.101415 TCGCAGGTCTATTCTGTCATGG 59.899 50.000 0.00 0.00 34.89 3.66
4339 4680 3.738282 GTCTATTCTGTCATGGCATCGTC 59.262 47.826 0.00 0.00 0.00 4.20
4424 4766 4.858965 AGAGCCTTTTTCTCCTGATGAT 57.141 40.909 0.00 0.00 0.00 2.45
4425 4767 4.525024 AGAGCCTTTTTCTCCTGATGATG 58.475 43.478 0.00 0.00 0.00 3.07
4438 4780 6.541278 TCTCCTGATGATGTGATGATGAAAAC 59.459 38.462 0.00 0.00 0.00 2.43
4455 4797 4.881273 TGAAAACGCCAGCTGATGTATATT 59.119 37.500 17.39 9.02 0.00 1.28
4456 4798 5.007626 TGAAAACGCCAGCTGATGTATATTC 59.992 40.000 17.39 16.41 0.00 1.75
4538 4880 9.691362 GCAAGAGGAAAATTTGTGTTATTTCTA 57.309 29.630 0.00 0.00 33.42 2.10
4549 4891 6.509418 TGTGTTATTTCTATCCCTTTGTGC 57.491 37.500 0.00 0.00 0.00 4.57
4569 4911 1.006825 TGTCTCGGTCGTCGCATTTG 61.007 55.000 0.00 0.00 39.05 2.32
4572 4914 2.202171 CGGTCGTCGCATTTGTGC 60.202 61.111 0.00 0.00 0.00 4.57
4575 4938 2.356433 TCGTCGCATTTGTGCCGA 60.356 55.556 0.00 0.00 0.00 5.54
4591 4954 2.267426 GCCGACCATTTAACATTTGCC 58.733 47.619 0.00 0.00 0.00 4.52
4597 4960 5.347364 CGACCATTTAACATTTGCCGAAAAT 59.653 36.000 0.00 0.00 39.13 1.82
4620 4983 6.820470 TTTCTGTAATGTTTGCCTTTTTCG 57.180 33.333 0.00 0.00 0.00 3.46
4667 5035 7.678226 GCATTGAAAACAATGGTAAAGCTATG 58.322 34.615 19.63 0.00 41.48 2.23
4687 5055 6.257630 GCTATGAAAACCACAAAAGCAAGAAA 59.742 34.615 0.00 0.00 33.55 2.52
4751 5189 0.039527 GCGTTGCGTTTGAAAGGGAT 60.040 50.000 0.00 0.00 0.00 3.85
4761 5199 4.096681 GTTTGAAAGGGATGGAGGGAAAT 58.903 43.478 0.00 0.00 0.00 2.17
4799 5237 2.359230 GCCTCGCTGCCTCTGTTT 60.359 61.111 0.00 0.00 0.00 2.83
4826 5264 2.055310 TAGCTCATACGGCCGACACG 62.055 60.000 35.90 17.01 37.36 4.49
4848 5286 8.296713 ACACGAGAATAAATGTAATGCAAAACT 58.703 29.630 0.00 0.00 0.00 2.66
4865 5303 1.109323 ACTGGGCAAAGGAGCAACAC 61.109 55.000 0.00 0.00 35.83 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.908198 CAAGGAGGAGGGAGAGGTTG 59.092 60.000 0.00 0.00 0.00 3.77
3 4 0.912006 GCAAGGAGGAGGGAGAGGTT 60.912 60.000 0.00 0.00 0.00 3.50
4 5 1.306568 GCAAGGAGGAGGGAGAGGT 60.307 63.158 0.00 0.00 0.00 3.85
5 6 1.002792 AGCAAGGAGGAGGGAGAGG 59.997 63.158 0.00 0.00 0.00 3.69
6 7 0.325110 TCAGCAAGGAGGAGGGAGAG 60.325 60.000 0.00 0.00 0.00 3.20
7 8 0.117140 TTCAGCAAGGAGGAGGGAGA 59.883 55.000 0.00 0.00 0.00 3.71
10 11 0.914644 TGATTCAGCAAGGAGGAGGG 59.085 55.000 0.00 0.00 0.00 4.30
18 19 0.169672 CCACGCCTTGATTCAGCAAG 59.830 55.000 0.00 0.00 43.74 4.01
19 20 1.865788 GCCACGCCTTGATTCAGCAA 61.866 55.000 0.00 0.00 0.00 3.91
20 21 2.334946 GCCACGCCTTGATTCAGCA 61.335 57.895 0.00 0.00 0.00 4.41
21 22 2.262471 CTGCCACGCCTTGATTCAGC 62.262 60.000 0.00 0.00 0.00 4.26
22 23 0.674581 TCTGCCACGCCTTGATTCAG 60.675 55.000 0.00 0.00 0.00 3.02
24 25 1.796796 GTCTGCCACGCCTTGATTC 59.203 57.895 0.00 0.00 0.00 2.52
25 26 2.034879 CGTCTGCCACGCCTTGATT 61.035 57.895 0.00 0.00 42.87 2.57
26 27 2.434884 CGTCTGCCACGCCTTGAT 60.435 61.111 0.00 0.00 42.87 2.57
50 51 3.947841 TTCAACACGCGTGCAGCC 61.948 61.111 37.35 0.00 44.76 4.85
51 52 2.722188 GTTCAACACGCGTGCAGC 60.722 61.111 37.35 20.06 43.95 5.25
52 53 2.423517 CGTTCAACACGCGTGCAG 60.424 61.111 37.35 28.65 43.37 4.41
80 81 0.297820 CGATCTAAGCGCCGAACAAC 59.702 55.000 2.29 0.00 0.00 3.32
82 83 1.226859 CCGATCTAAGCGCCGAACA 60.227 57.895 2.29 0.00 0.00 3.18
83 84 0.526954 TTCCGATCTAAGCGCCGAAC 60.527 55.000 2.29 0.00 0.00 3.95
86 87 1.009389 GGATTCCGATCTAAGCGCCG 61.009 60.000 2.29 0.00 32.66 6.46
87 88 0.033504 TGGATTCCGATCTAAGCGCC 59.966 55.000 2.29 0.00 32.66 6.53
88 89 1.140816 GTGGATTCCGATCTAAGCGC 58.859 55.000 0.00 0.00 32.66 5.92
99 100 0.179084 TTCAGATCGCGGTGGATTCC 60.179 55.000 6.13 0.00 0.00 3.01
100 101 1.795286 GATTCAGATCGCGGTGGATTC 59.205 52.381 6.13 1.51 0.00 2.52
101 102 1.871080 GATTCAGATCGCGGTGGATT 58.129 50.000 6.13 0.00 0.00 3.01
102 103 3.595691 GATTCAGATCGCGGTGGAT 57.404 52.632 6.13 1.35 0.00 3.41
111 112 2.968006 CGTTCTCGTAGCGATTCAGATC 59.032 50.000 0.00 0.00 34.61 2.75
112 113 2.287069 CCGTTCTCGTAGCGATTCAGAT 60.287 50.000 0.00 0.00 34.61 2.90
114 115 1.467875 CCGTTCTCGTAGCGATTCAG 58.532 55.000 0.00 0.00 34.61 3.02
116 117 0.248539 AGCCGTTCTCGTAGCGATTC 60.249 55.000 0.00 0.00 34.61 2.52
117 118 0.248539 GAGCCGTTCTCGTAGCGATT 60.249 55.000 0.00 0.00 34.61 3.34
132 133 2.799540 GAACGCGGATGAACGAGCC 61.800 63.158 12.47 0.00 37.15 4.70
133 134 1.352156 AAGAACGCGGATGAACGAGC 61.352 55.000 12.47 0.00 37.15 5.03
140 141 3.850207 CGTTACAAGAACGCGGATG 57.150 52.632 12.47 6.09 36.82 3.51
146 147 1.134226 ACGGAAGCGTTACAAGAACG 58.866 50.000 5.50 5.50 45.56 3.95
147 148 1.862827 ACACGGAAGCGTTACAAGAAC 59.137 47.619 0.00 0.00 0.00 3.01
150 151 0.433492 CGACACGGAAGCGTTACAAG 59.567 55.000 0.00 0.00 0.00 3.16
151 152 1.550659 GCGACACGGAAGCGTTACAA 61.551 55.000 0.00 0.00 0.00 2.41
153 154 1.550659 TTGCGACACGGAAGCGTTAC 61.551 55.000 0.00 0.00 31.36 2.50
155 156 1.897398 GATTGCGACACGGAAGCGTT 61.897 55.000 4.43 0.00 40.89 4.84
157 158 2.395690 GATTGCGACACGGAAGCG 59.604 61.111 4.43 0.00 40.89 4.68
158 159 1.696832 GAGGATTGCGACACGGAAGC 61.697 60.000 5.24 5.24 40.89 3.86
159 160 0.389817 TGAGGATTGCGACACGGAAG 60.390 55.000 4.43 0.00 40.89 3.46
160 161 0.034198 TTGAGGATTGCGACACGGAA 59.966 50.000 0.40 0.40 41.89 4.30
162 163 1.361668 CCTTGAGGATTGCGACACGG 61.362 60.000 0.00 0.00 37.39 4.94
163 164 1.361668 CCCTTGAGGATTGCGACACG 61.362 60.000 0.00 0.00 38.24 4.49
164 165 0.321653 ACCCTTGAGGATTGCGACAC 60.322 55.000 0.00 0.00 39.89 3.67
165 166 1.271856 TACCCTTGAGGATTGCGACA 58.728 50.000 0.00 0.00 39.89 4.35
166 167 2.158957 TCATACCCTTGAGGATTGCGAC 60.159 50.000 0.00 0.00 39.89 5.19
168 169 2.620251 TCATACCCTTGAGGATTGCG 57.380 50.000 0.00 0.00 39.89 4.85
172 173 2.158696 GCAGCTTCATACCCTTGAGGAT 60.159 50.000 0.00 0.00 39.89 3.24
175 176 2.170187 AGAGCAGCTTCATACCCTTGAG 59.830 50.000 0.00 0.00 0.00 3.02
177 178 2.559440 GAGAGCAGCTTCATACCCTTG 58.441 52.381 0.00 0.00 0.00 3.61
179 180 1.127343 GGAGAGCAGCTTCATACCCT 58.873 55.000 0.00 0.00 0.00 4.34
180 181 0.107643 GGGAGAGCAGCTTCATACCC 59.892 60.000 0.00 2.03 0.00 3.69
183 184 1.062581 AGAGGGGAGAGCAGCTTCATA 60.063 52.381 0.00 0.00 0.00 2.15
184 185 0.326427 AGAGGGGAGAGCAGCTTCAT 60.326 55.000 0.00 0.00 0.00 2.57
185 186 0.975040 GAGAGGGGAGAGCAGCTTCA 60.975 60.000 0.00 0.00 0.00 3.02
186 187 0.687427 AGAGAGGGGAGAGCAGCTTC 60.687 60.000 0.00 0.00 0.00 3.86
188 189 1.076044 GAGAGAGGGGAGAGCAGCT 60.076 63.158 0.00 0.00 0.00 4.24
189 190 1.076044 AGAGAGAGGGGAGAGCAGC 60.076 63.158 0.00 0.00 0.00 5.25
190 191 0.552848 AGAGAGAGAGGGGAGAGCAG 59.447 60.000 0.00 0.00 0.00 4.24
191 192 0.550914 GAGAGAGAGAGGGGAGAGCA 59.449 60.000 0.00 0.00 0.00 4.26
192 193 0.846693 AGAGAGAGAGAGGGGAGAGC 59.153 60.000 0.00 0.00 0.00 4.09
193 194 2.370189 GAGAGAGAGAGAGAGGGGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
194 195 2.408565 GAGAGAGAGAGAGAGGGGAGA 58.591 57.143 0.00 0.00 0.00 3.71
195 196 1.070758 CGAGAGAGAGAGAGAGGGGAG 59.929 61.905 0.00 0.00 0.00 4.30
198 199 2.288666 CAACGAGAGAGAGAGAGAGGG 58.711 57.143 0.00 0.00 0.00 4.30
199 200 1.670811 GCAACGAGAGAGAGAGAGAGG 59.329 57.143 0.00 0.00 0.00 3.69
200 201 2.632377 AGCAACGAGAGAGAGAGAGAG 58.368 52.381 0.00 0.00 0.00 3.20
202 203 3.531538 ACTAGCAACGAGAGAGAGAGAG 58.468 50.000 0.00 0.00 0.00 3.20
208 209 3.729462 CGGAGAAACTAGCAACGAGAGAG 60.729 52.174 0.00 0.00 0.00 3.20
209 210 2.161808 CGGAGAAACTAGCAACGAGAGA 59.838 50.000 0.00 0.00 0.00 3.10
210 211 2.095161 ACGGAGAAACTAGCAACGAGAG 60.095 50.000 0.00 0.00 0.00 3.20
212 213 2.349297 ACGGAGAAACTAGCAACGAG 57.651 50.000 0.00 0.00 0.00 4.18
213 214 3.076621 TCTACGGAGAAACTAGCAACGA 58.923 45.455 0.00 0.00 0.00 3.85
214 215 3.482722 TCTACGGAGAAACTAGCAACG 57.517 47.619 0.00 0.00 0.00 4.10
215 216 5.408356 TCAATCTACGGAGAAACTAGCAAC 58.592 41.667 0.00 0.00 34.61 4.17
216 217 5.654603 TCAATCTACGGAGAAACTAGCAA 57.345 39.130 0.00 0.00 34.61 3.91
218 219 6.079424 AGATCAATCTACGGAGAAACTAGC 57.921 41.667 0.00 0.00 34.85 3.42
219 220 6.419413 GCAAGATCAATCTACGGAGAAACTAG 59.581 42.308 0.00 0.00 35.76 2.57
220 221 6.273825 GCAAGATCAATCTACGGAGAAACTA 58.726 40.000 0.00 0.00 35.76 2.24
221 222 5.112686 GCAAGATCAATCTACGGAGAAACT 58.887 41.667 0.00 0.00 35.76 2.66
222 223 4.271291 GGCAAGATCAATCTACGGAGAAAC 59.729 45.833 0.00 0.00 35.76 2.78
225 226 2.034685 CGGCAAGATCAATCTACGGAGA 59.965 50.000 0.00 0.00 35.76 3.71
226 227 2.034685 TCGGCAAGATCAATCTACGGAG 59.965 50.000 0.00 0.00 35.76 4.63
227 228 2.028876 TCGGCAAGATCAATCTACGGA 58.971 47.619 0.00 5.85 35.76 4.69
228 229 2.509052 TCGGCAAGATCAATCTACGG 57.491 50.000 0.00 4.17 35.76 4.02
229 230 2.156504 GCATCGGCAAGATCAATCTACG 59.843 50.000 0.00 0.06 37.52 3.51
232 233 1.224075 CGCATCGGCAAGATCAATCT 58.776 50.000 0.00 0.00 41.24 2.40
233 234 0.940126 ACGCATCGGCAAGATCAATC 59.060 50.000 0.00 0.00 41.24 2.67
234 235 2.138320 CTACGCATCGGCAAGATCAAT 58.862 47.619 0.00 0.00 41.24 2.57
235 236 1.136110 TCTACGCATCGGCAAGATCAA 59.864 47.619 0.00 0.00 41.24 2.57
237 238 1.852942 TTCTACGCATCGGCAAGATC 58.147 50.000 0.00 0.00 41.24 2.75
238 239 2.533266 ATTCTACGCATCGGCAAGAT 57.467 45.000 0.00 0.00 41.24 2.40
239 240 2.309528 AATTCTACGCATCGGCAAGA 57.690 45.000 0.00 0.00 41.24 3.02
240 241 3.405170 AAAATTCTACGCATCGGCAAG 57.595 42.857 0.00 0.00 41.24 4.01
258 259 6.425417 GGGGATCGTTGCAGAAATTTTAAAAA 59.575 34.615 4.44 0.00 0.00 1.94
259 260 5.929415 GGGGATCGTTGCAGAAATTTTAAAA 59.071 36.000 2.51 2.51 0.00 1.52
260 261 5.011125 TGGGGATCGTTGCAGAAATTTTAAA 59.989 36.000 0.00 0.00 0.00 1.52
261 262 4.524714 TGGGGATCGTTGCAGAAATTTTAA 59.475 37.500 0.00 0.00 0.00 1.52
262 263 4.082845 TGGGGATCGTTGCAGAAATTTTA 58.917 39.130 0.00 0.00 0.00 1.52
263 264 2.896685 TGGGGATCGTTGCAGAAATTTT 59.103 40.909 0.00 0.00 0.00 1.82
264 265 2.493278 CTGGGGATCGTTGCAGAAATTT 59.507 45.455 0.00 0.00 0.00 1.82
265 266 2.094675 CTGGGGATCGTTGCAGAAATT 58.905 47.619 0.00 0.00 0.00 1.82
267 268 0.960364 GCTGGGGATCGTTGCAGAAA 60.960 55.000 0.00 0.00 0.00 2.52
268 269 1.377202 GCTGGGGATCGTTGCAGAA 60.377 57.895 0.00 0.00 0.00 3.02
269 270 2.244117 GAGCTGGGGATCGTTGCAGA 62.244 60.000 0.00 0.00 0.00 4.26
271 272 2.268920 GAGCTGGGGATCGTTGCA 59.731 61.111 0.00 0.00 0.00 4.08
272 273 2.514824 GGAGCTGGGGATCGTTGC 60.515 66.667 0.00 0.00 0.00 4.17
273 274 2.202932 CGGAGCTGGGGATCGTTG 60.203 66.667 0.00 0.00 0.00 4.10
286 287 2.186384 CTTCAGAGGCAGGCGGAG 59.814 66.667 0.00 0.00 0.00 4.63
287 288 4.087892 GCTTCAGAGGCAGGCGGA 62.088 66.667 0.00 0.00 0.00 5.54
289 290 2.818714 CAGCTTCAGAGGCAGGCG 60.819 66.667 7.36 0.00 0.00 5.52
290 291 3.132801 GCAGCTTCAGAGGCAGGC 61.133 66.667 7.36 6.38 0.00 4.85
291 292 1.077644 ATGCAGCTTCAGAGGCAGG 60.078 57.895 7.36 0.00 39.95 4.85
292 293 0.107606 AGATGCAGCTTCAGAGGCAG 60.108 55.000 7.36 0.00 39.95 4.85
293 294 0.392595 CAGATGCAGCTTCAGAGGCA 60.393 55.000 0.00 0.00 41.00 4.75
294 295 0.392729 ACAGATGCAGCTTCAGAGGC 60.393 55.000 0.00 0.00 0.00 4.70
295 296 1.738350 CAACAGATGCAGCTTCAGAGG 59.262 52.381 0.00 0.00 0.00 3.69
297 298 2.148768 CACAACAGATGCAGCTTCAGA 58.851 47.619 0.00 0.00 0.00 3.27
298 299 1.199327 CCACAACAGATGCAGCTTCAG 59.801 52.381 0.00 5.21 0.00 3.02
300 301 0.109412 GCCACAACAGATGCAGCTTC 60.109 55.000 0.00 0.00 0.00 3.86
301 302 0.538977 AGCCACAACAGATGCAGCTT 60.539 50.000 0.00 0.00 37.40 3.74
302 303 0.959372 GAGCCACAACAGATGCAGCT 60.959 55.000 0.00 0.00 41.85 4.24
303 304 1.505353 GAGCCACAACAGATGCAGC 59.495 57.895 0.00 0.00 0.00 5.25
306 307 1.975363 GAGCGAGCCACAACAGATGC 61.975 60.000 0.00 0.00 0.00 3.91
307 308 1.690283 CGAGCGAGCCACAACAGATG 61.690 60.000 0.00 0.00 0.00 2.90
309 310 2.049156 CGAGCGAGCCACAACAGA 60.049 61.111 0.00 0.00 0.00 3.41
310 311 3.782244 GCGAGCGAGCCACAACAG 61.782 66.667 0.00 0.00 0.00 3.16
337 338 3.204827 CCTCAAGAATGCCGGCGG 61.205 66.667 24.35 24.35 0.00 6.13
338 339 2.125147 TCCTCAAGAATGCCGGCG 60.125 61.111 23.90 6.13 0.00 6.46
339 340 2.476320 GCTCCTCAAGAATGCCGGC 61.476 63.158 22.73 22.73 0.00 6.13
340 341 2.176273 CGCTCCTCAAGAATGCCGG 61.176 63.158 0.00 0.00 0.00 6.13
341 342 2.817423 GCGCTCCTCAAGAATGCCG 61.817 63.158 0.00 0.00 0.00 5.69
342 343 1.451028 AGCGCTCCTCAAGAATGCC 60.451 57.895 2.64 0.00 0.00 4.40
343 344 1.712977 CCAGCGCTCCTCAAGAATGC 61.713 60.000 7.13 0.00 0.00 3.56
348 349 4.749310 ACGCCAGCGCTCCTCAAG 62.749 66.667 7.13 0.00 44.19 3.02
358 359 4.479993 AGAGCCATGGACGCCAGC 62.480 66.667 18.40 0.00 36.75 4.85
359 360 2.202987 GAGAGCCATGGACGCCAG 60.203 66.667 18.40 0.00 36.75 4.85
375 376 2.826287 CTGAGCTCGAGGAGGCGA 60.826 66.667 15.58 0.00 38.74 5.54
376 377 2.826287 TCTGAGCTCGAGGAGGCG 60.826 66.667 15.58 0.00 0.00 5.52
377 378 2.804856 GTCTGAGCTCGAGGAGGC 59.195 66.667 15.58 0.00 0.00 4.70
378 379 3.106552 CGTCTGAGCTCGAGGAGG 58.893 66.667 15.58 13.10 0.00 4.30
379 380 1.927608 TTGCGTCTGAGCTCGAGGAG 61.928 60.000 23.09 11.21 38.13 3.69
380 381 1.971695 TTGCGTCTGAGCTCGAGGA 60.972 57.895 23.09 13.59 38.13 3.71
383 384 0.939577 GTTGTTGCGTCTGAGCTCGA 60.940 55.000 9.64 6.70 38.13 4.04
385 386 0.510359 CTGTTGTTGCGTCTGAGCTC 59.490 55.000 6.82 6.82 38.13 4.09
386 387 0.104855 TCTGTTGTTGCGTCTGAGCT 59.895 50.000 0.00 0.00 38.13 4.09
387 388 1.151668 ATCTGTTGTTGCGTCTGAGC 58.848 50.000 0.00 0.00 37.71 4.26
390 391 3.338818 ACAAATCTGTTGTTGCGTCTG 57.661 42.857 0.00 0.00 28.57 3.51
401 402 7.846644 TCTTCAAAAATTGCAACAAATCTGT 57.153 28.000 0.00 0.00 37.39 3.41
403 404 8.897872 AGATCTTCAAAAATTGCAACAAATCT 57.102 26.923 0.00 0.00 0.00 2.40
404 405 9.377383 CAAGATCTTCAAAAATTGCAACAAATC 57.623 29.630 4.57 0.00 0.00 2.17
405 406 8.895737 ACAAGATCTTCAAAAATTGCAACAAAT 58.104 25.926 4.57 0.00 0.00 2.32
406 407 8.266392 ACAAGATCTTCAAAAATTGCAACAAA 57.734 26.923 4.57 0.00 0.00 2.83
408 409 7.676807 GCAACAAGATCTTCAAAAATTGCAACA 60.677 33.333 19.18 0.00 39.68 3.33
409 410 6.630045 GCAACAAGATCTTCAAAAATTGCAAC 59.370 34.615 19.18 0.00 39.68 4.17
410 411 6.315642 TGCAACAAGATCTTCAAAAATTGCAA 59.684 30.769 21.94 0.00 44.85 4.08
411 412 5.816258 TGCAACAAGATCTTCAAAAATTGCA 59.184 32.000 21.11 21.11 45.42 4.08
412 413 6.289745 TGCAACAAGATCTTCAAAAATTGC 57.710 33.333 4.57 13.98 40.18 3.56
413 414 9.724839 AAAATGCAACAAGATCTTCAAAAATTG 57.275 25.926 4.57 5.12 0.00 2.32
415 416 9.940166 GAAAAATGCAACAAGATCTTCAAAAAT 57.060 25.926 4.57 0.00 0.00 1.82
416 417 8.115520 CGAAAAATGCAACAAGATCTTCAAAAA 58.884 29.630 4.57 0.00 0.00 1.94
417 418 7.277539 ACGAAAAATGCAACAAGATCTTCAAAA 59.722 29.630 4.57 0.00 0.00 2.44
418 419 6.756074 ACGAAAAATGCAACAAGATCTTCAAA 59.244 30.769 4.57 0.00 0.00 2.69
419 420 6.272318 ACGAAAAATGCAACAAGATCTTCAA 58.728 32.000 4.57 0.00 0.00 2.69
420 421 5.830912 ACGAAAAATGCAACAAGATCTTCA 58.169 33.333 4.57 0.61 0.00 3.02
421 422 7.378461 TGTTACGAAAAATGCAACAAGATCTTC 59.622 33.333 4.57 0.00 0.00 2.87
422 423 7.199766 TGTTACGAAAAATGCAACAAGATCTT 58.800 30.769 0.88 0.88 0.00 2.40
423 424 6.734137 TGTTACGAAAAATGCAACAAGATCT 58.266 32.000 0.00 0.00 0.00 2.75
424 425 6.984740 TGTTACGAAAAATGCAACAAGATC 57.015 33.333 0.00 0.00 0.00 2.75
425 426 7.945033 ATTGTTACGAAAAATGCAACAAGAT 57.055 28.000 0.00 0.00 41.04 2.40
426 427 7.276658 ACAATTGTTACGAAAAATGCAACAAGA 59.723 29.630 4.92 0.00 41.04 3.02
427 428 7.397970 ACAATTGTTACGAAAAATGCAACAAG 58.602 30.769 4.92 0.00 41.04 3.16
428 429 7.276658 AGACAATTGTTACGAAAAATGCAACAA 59.723 29.630 13.36 0.00 41.70 2.83
429 430 6.754209 AGACAATTGTTACGAAAAATGCAACA 59.246 30.769 13.36 0.00 0.00 3.33
430 431 7.160633 AGACAATTGTTACGAAAAATGCAAC 57.839 32.000 13.36 0.00 0.00 4.17
431 432 8.132362 ACTAGACAATTGTTACGAAAAATGCAA 58.868 29.630 13.36 0.00 0.00 4.08
432 433 7.644490 ACTAGACAATTGTTACGAAAAATGCA 58.356 30.769 13.36 0.00 0.00 3.96
433 434 8.417176 CAACTAGACAATTGTTACGAAAAATGC 58.583 33.333 13.36 0.00 0.00 3.56
434 435 8.417176 GCAACTAGACAATTGTTACGAAAAATG 58.583 33.333 13.36 5.17 0.00 2.32
435 436 8.132362 TGCAACTAGACAATTGTTACGAAAAAT 58.868 29.630 13.36 0.00 0.00 1.82
436 437 7.473366 TGCAACTAGACAATTGTTACGAAAAA 58.527 30.769 13.36 0.00 0.00 1.94
437 438 7.011576 TCTGCAACTAGACAATTGTTACGAAAA 59.988 33.333 13.36 0.00 0.00 2.29
438 439 6.480651 TCTGCAACTAGACAATTGTTACGAAA 59.519 34.615 13.36 0.00 0.00 3.46
439 440 5.986741 TCTGCAACTAGACAATTGTTACGAA 59.013 36.000 13.36 0.00 0.00 3.85
440 441 5.534407 TCTGCAACTAGACAATTGTTACGA 58.466 37.500 13.36 0.00 0.00 3.43
441 442 5.839262 TCTGCAACTAGACAATTGTTACG 57.161 39.130 13.36 6.48 0.00 3.18
442 443 9.463443 AATTTTCTGCAACTAGACAATTGTTAC 57.537 29.630 13.36 0.37 36.34 2.50
444 445 9.683069 CTAATTTTCTGCAACTAGACAATTGTT 57.317 29.630 13.36 5.60 37.53 2.83
445 446 9.066892 TCTAATTTTCTGCAACTAGACAATTGT 57.933 29.630 11.78 11.78 37.53 2.71
446 447 9.334693 GTCTAATTTTCTGCAACTAGACAATTG 57.665 33.333 3.24 3.24 37.53 2.32
447 448 8.230486 CGTCTAATTTTCTGCAACTAGACAATT 58.770 33.333 0.00 4.88 39.27 2.32
448 449 7.624344 GCGTCTAATTTTCTGCAACTAGACAAT 60.624 37.037 0.00 0.00 34.14 2.71
449 450 6.347402 GCGTCTAATTTTCTGCAACTAGACAA 60.347 38.462 0.00 0.00 34.14 3.18
450 451 5.120208 GCGTCTAATTTTCTGCAACTAGACA 59.880 40.000 0.00 0.00 34.14 3.41
451 452 5.551893 GCGTCTAATTTTCTGCAACTAGAC 58.448 41.667 0.00 0.00 0.00 2.59
452 453 4.326278 CGCGTCTAATTTTCTGCAACTAGA 59.674 41.667 0.00 0.00 0.00 2.43
453 454 4.326278 TCGCGTCTAATTTTCTGCAACTAG 59.674 41.667 5.77 0.00 0.00 2.57
454 455 4.090930 GTCGCGTCTAATTTTCTGCAACTA 59.909 41.667 5.77 0.00 0.00 2.24
455 456 3.064207 TCGCGTCTAATTTTCTGCAACT 58.936 40.909 5.77 0.00 0.00 3.16
456 457 3.153735 GTCGCGTCTAATTTTCTGCAAC 58.846 45.455 5.77 0.00 0.00 4.17
457 458 2.159894 CGTCGCGTCTAATTTTCTGCAA 60.160 45.455 5.77 0.00 0.00 4.08
458 459 1.388768 CGTCGCGTCTAATTTTCTGCA 59.611 47.619 5.77 0.00 0.00 4.41
459 460 1.389106 ACGTCGCGTCTAATTTTCTGC 59.611 47.619 5.77 0.00 33.69 4.26
460 461 4.556135 TCTTACGTCGCGTCTAATTTTCTG 59.444 41.667 5.77 0.00 41.54 3.02
461 462 4.726416 TCTTACGTCGCGTCTAATTTTCT 58.274 39.130 5.77 0.00 41.54 2.52
462 463 5.004156 ACATCTTACGTCGCGTCTAATTTTC 59.996 40.000 5.77 0.00 41.54 2.29
463 464 4.860907 ACATCTTACGTCGCGTCTAATTTT 59.139 37.500 5.77 0.00 41.54 1.82
464 465 4.418392 ACATCTTACGTCGCGTCTAATTT 58.582 39.130 5.77 0.00 41.54 1.82
465 466 4.025015 ACATCTTACGTCGCGTCTAATT 57.975 40.909 5.77 0.00 41.54 1.40
466 467 3.687572 ACATCTTACGTCGCGTCTAAT 57.312 42.857 5.77 0.00 41.54 1.73
467 468 3.165890 CAACATCTTACGTCGCGTCTAA 58.834 45.455 5.77 0.88 41.54 2.10
468 469 2.160219 ACAACATCTTACGTCGCGTCTA 59.840 45.455 5.77 0.00 41.54 2.59
469 470 1.068748 ACAACATCTTACGTCGCGTCT 60.069 47.619 5.77 0.00 41.54 4.18
470 471 1.334054 ACAACATCTTACGTCGCGTC 58.666 50.000 5.77 0.00 41.54 5.19
471 472 1.454276 CAACAACATCTTACGTCGCGT 59.546 47.619 5.77 9.64 44.35 6.01
472 473 1.782023 GCAACAACATCTTACGTCGCG 60.782 52.381 0.00 0.00 0.00 5.87
473 474 1.193650 TGCAACAACATCTTACGTCGC 59.806 47.619 0.00 0.00 0.00 5.19
474 475 3.513462 TTGCAACAACATCTTACGTCG 57.487 42.857 0.00 0.00 0.00 5.12
475 476 5.685511 ACAAATTGCAACAACATCTTACGTC 59.314 36.000 0.00 0.00 0.00 4.34
476 477 5.587289 ACAAATTGCAACAACATCTTACGT 58.413 33.333 0.00 0.00 0.00 3.57
477 478 6.509317 AACAAATTGCAACAACATCTTACG 57.491 33.333 0.00 0.00 0.00 3.18
481 482 9.771915 CTTTTTAAACAAATTGCAACAACATCT 57.228 25.926 0.00 0.00 0.00 2.90
482 483 9.766277 TCTTTTTAAACAAATTGCAACAACATC 57.234 25.926 0.00 0.00 0.00 3.06
484 485 9.766277 GATCTTTTTAAACAAATTGCAACAACA 57.234 25.926 0.00 0.00 0.00 3.33
485 486 9.220635 GGATCTTTTTAAACAAATTGCAACAAC 57.779 29.630 0.00 0.00 0.00 3.32
486 487 8.950210 TGGATCTTTTTAAACAAATTGCAACAA 58.050 25.926 0.00 0.00 0.00 2.83
487 488 8.394121 GTGGATCTTTTTAAACAAATTGCAACA 58.606 29.630 0.00 0.00 0.00 3.33
488 489 7.855409 GGTGGATCTTTTTAAACAAATTGCAAC 59.145 33.333 0.00 0.00 0.00 4.17
489 490 7.254590 CGGTGGATCTTTTTAAACAAATTGCAA 60.255 33.333 0.00 0.00 0.00 4.08
490 491 6.201806 CGGTGGATCTTTTTAAACAAATTGCA 59.798 34.615 0.00 0.00 0.00 4.08
491 492 6.422400 TCGGTGGATCTTTTTAAACAAATTGC 59.578 34.615 0.00 0.00 0.00 3.56
492 493 7.095816 GGTCGGTGGATCTTTTTAAACAAATTG 60.096 37.037 0.00 0.00 0.00 2.32
493 494 6.926826 GGTCGGTGGATCTTTTTAAACAAATT 59.073 34.615 0.00 0.00 0.00 1.82
494 495 6.452242 GGTCGGTGGATCTTTTTAAACAAAT 58.548 36.000 0.00 0.00 0.00 2.32
495 496 5.505985 CGGTCGGTGGATCTTTTTAAACAAA 60.506 40.000 0.00 0.00 0.00 2.83
496 497 4.023878 CGGTCGGTGGATCTTTTTAAACAA 60.024 41.667 0.00 0.00 0.00 2.83
497 498 3.499157 CGGTCGGTGGATCTTTTTAAACA 59.501 43.478 0.00 0.00 0.00 2.83
498 499 3.747529 TCGGTCGGTGGATCTTTTTAAAC 59.252 43.478 0.00 0.00 0.00 2.01
499 500 3.747529 GTCGGTCGGTGGATCTTTTTAAA 59.252 43.478 0.00 0.00 0.00 1.52
500 501 3.328505 GTCGGTCGGTGGATCTTTTTAA 58.671 45.455 0.00 0.00 0.00 1.52
501 502 2.671914 CGTCGGTCGGTGGATCTTTTTA 60.672 50.000 0.00 0.00 35.71 1.52
502 503 1.804601 GTCGGTCGGTGGATCTTTTT 58.195 50.000 0.00 0.00 0.00 1.94
503 504 0.389426 CGTCGGTCGGTGGATCTTTT 60.389 55.000 0.00 0.00 35.71 2.27
504 505 1.214589 CGTCGGTCGGTGGATCTTT 59.785 57.895 0.00 0.00 35.71 2.52
505 506 2.882876 CGTCGGTCGGTGGATCTT 59.117 61.111 0.00 0.00 35.71 2.40
506 507 3.823330 GCGTCGGTCGGTGGATCT 61.823 66.667 0.00 0.00 40.26 2.75
510 511 4.824166 CTACGCGTCGGTCGGTGG 62.824 72.222 18.63 0.00 40.26 4.61
511 512 2.622722 CTACTACGCGTCGGTCGGTG 62.623 65.000 18.63 4.36 40.26 4.94
512 513 2.434185 TACTACGCGTCGGTCGGT 60.434 61.111 18.63 8.96 40.26 4.69
513 514 2.322422 CTACTACGCGTCGGTCGG 59.678 66.667 18.63 9.11 40.26 4.79
514 515 2.350537 GCTACTACGCGTCGGTCG 60.351 66.667 18.63 13.41 43.12 4.79
515 516 2.023882 GGCTACTACGCGTCGGTC 59.976 66.667 18.63 5.26 0.00 4.79
516 517 3.512516 GGGCTACTACGCGTCGGT 61.513 66.667 18.63 18.81 0.00 4.69
517 518 4.261781 GGGGCTACTACGCGTCGG 62.262 72.222 18.63 13.23 0.00 4.79
518 519 4.261781 GGGGGCTACTACGCGTCG 62.262 72.222 18.63 13.46 0.00 5.12
519 520 4.261781 CGGGGGCTACTACGCGTC 62.262 72.222 18.63 0.00 38.10 5.19
521 522 4.261781 GACGGGGGCTACTACGCG 62.262 72.222 3.53 3.53 46.61 6.01
522 523 4.261781 CGACGGGGGCTACTACGC 62.262 72.222 0.00 0.00 0.00 4.42
523 524 0.886490 ATACGACGGGGGCTACTACG 60.886 60.000 0.00 0.00 0.00 3.51
524 525 1.322442 AATACGACGGGGGCTACTAC 58.678 55.000 0.00 0.00 0.00 2.73
525 526 2.106511 AGTAATACGACGGGGGCTACTA 59.893 50.000 0.00 0.00 0.00 1.82
526 527 1.133668 AGTAATACGACGGGGGCTACT 60.134 52.381 0.00 0.00 0.00 2.57
527 528 1.000938 CAGTAATACGACGGGGGCTAC 60.001 57.143 0.00 0.00 0.00 3.58
528 529 1.321474 CAGTAATACGACGGGGGCTA 58.679 55.000 0.00 0.00 0.00 3.93
529 530 2.024590 GCAGTAATACGACGGGGGCT 62.025 60.000 0.00 0.00 0.00 5.19
530 531 1.593479 GCAGTAATACGACGGGGGC 60.593 63.158 0.00 0.00 0.00 5.80
531 532 0.176219 TTGCAGTAATACGACGGGGG 59.824 55.000 0.00 0.00 0.00 5.40
532 533 2.012937 TTTGCAGTAATACGACGGGG 57.987 50.000 0.00 0.00 0.00 5.73
533 534 3.787476 GCAATTTGCAGTAATACGACGGG 60.787 47.826 16.35 0.00 44.26 5.28
534 535 3.350912 GCAATTTGCAGTAATACGACGG 58.649 45.455 16.35 0.00 44.26 4.79
553 554 2.208132 TATCTTTCTTTTGCGGGGCA 57.792 45.000 0.00 0.00 36.47 5.36
554 555 3.801114 AATATCTTTCTTTTGCGGGGC 57.199 42.857 0.00 0.00 0.00 5.80
555 556 6.766467 AGTAGTAATATCTTTCTTTTGCGGGG 59.234 38.462 0.00 0.00 0.00 5.73
556 557 7.787725 AGTAGTAATATCTTTCTTTTGCGGG 57.212 36.000 0.00 0.00 0.00 6.13
557 558 7.640240 GCAAGTAGTAATATCTTTCTTTTGCGG 59.360 37.037 0.00 0.00 29.99 5.69
558 559 8.175069 TGCAAGTAGTAATATCTTTCTTTTGCG 58.825 33.333 11.10 0.00 35.86 4.85
559 560 9.840427 TTGCAAGTAGTAATATCTTTCTTTTGC 57.160 29.630 0.00 9.92 34.91 3.68
598 599 8.546597 ACACAATTTGCAAGTACTTTCTTTTT 57.453 26.923 5.07 0.00 0.00 1.94
599 600 8.546597 AACACAATTTGCAAGTACTTTCTTTT 57.453 26.923 5.07 0.00 0.00 2.27
600 601 9.816354 ATAACACAATTTGCAAGTACTTTCTTT 57.184 25.926 5.07 0.00 0.00 2.52
601 602 9.463443 GATAACACAATTTGCAAGTACTTTCTT 57.537 29.630 5.07 0.00 0.00 2.52
602 603 8.850156 AGATAACACAATTTGCAAGTACTTTCT 58.150 29.630 5.07 0.00 0.00 2.52
603 604 9.118236 GAGATAACACAATTTGCAAGTACTTTC 57.882 33.333 5.07 1.04 0.00 2.62
604 605 8.082242 GGAGATAACACAATTTGCAAGTACTTT 58.918 33.333 5.07 0.00 0.00 2.66
605 606 7.573096 CGGAGATAACACAATTTGCAAGTACTT 60.573 37.037 1.12 1.12 0.00 2.24
606 607 6.128282 CGGAGATAACACAATTTGCAAGTACT 60.128 38.462 0.00 0.00 0.00 2.73
607 608 6.021596 CGGAGATAACACAATTTGCAAGTAC 58.978 40.000 0.00 0.00 0.00 2.73
608 609 5.123186 CCGGAGATAACACAATTTGCAAGTA 59.877 40.000 0.00 0.00 0.00 2.24
609 610 4.082787 CCGGAGATAACACAATTTGCAAGT 60.083 41.667 0.00 0.00 0.00 3.16
615 616 4.295141 TCACCCGGAGATAACACAATTT 57.705 40.909 0.73 0.00 0.00 1.82
743 746 4.764771 CGGGGTACGGGGGACAGA 62.765 72.222 0.00 0.00 39.42 3.41
786 789 4.636435 CGAGGTTGGTGCGGGGTT 62.636 66.667 0.00 0.00 0.00 4.11
805 808 2.125633 GTCGTCGGCCTTCCTTCC 60.126 66.667 0.00 0.00 0.00 3.46
806 809 2.125633 GGTCGTCGGCCTTCCTTC 60.126 66.667 9.10 0.00 0.00 3.46
807 810 2.047213 TTTGGTCGTCGGCCTTCCTT 62.047 55.000 18.28 0.00 0.00 3.36
808 811 2.513259 TTTGGTCGTCGGCCTTCCT 61.513 57.895 18.28 0.00 0.00 3.36
1418 1451 9.787532 CAACCTCTACATTGGTTTATTAATGTG 57.212 33.333 11.60 4.02 44.63 3.21
1456 1491 6.210984 ACCCGGATAACCTCAATATCTACTTC 59.789 42.308 0.73 0.00 31.75 3.01
1463 1498 6.945636 TTATGACCCGGATAACCTCAATAT 57.054 37.500 0.73 0.00 0.00 1.28
1467 1502 5.104277 ACAAATTATGACCCGGATAACCTCA 60.104 40.000 0.73 0.00 0.00 3.86
1493 1537 1.000938 GGCATGAATTTCAGATCCGGC 60.001 52.381 5.21 2.27 0.00 6.13
1500 1544 1.541147 ACACCGTGGCATGAATTTCAG 59.459 47.619 8.63 0.00 0.00 3.02
1551 1595 4.032786 GCTGTTGTTTCGCATTCAAAGTTT 59.967 37.500 0.00 0.00 0.00 2.66
1564 1609 3.907894 TTATGAACCCGCTGTTGTTTC 57.092 42.857 0.00 0.00 37.29 2.78
1569 1614 3.004315 CACAAGTTTATGAACCCGCTGTT 59.996 43.478 0.00 0.00 40.81 3.16
1583 1628 0.464916 GTGACCCCCGACACAAGTTT 60.465 55.000 0.00 0.00 37.05 2.66
1620 1674 4.358841 TTGGCATGGTGTCGGGGG 62.359 66.667 0.00 0.00 0.00 5.40
1621 1675 2.751436 CTTGGCATGGTGTCGGGG 60.751 66.667 0.00 0.00 0.00 5.73
1623 1677 1.670811 GATAACTTGGCATGGTGTCGG 59.329 52.381 0.47 0.00 0.00 4.79
1624 1678 1.670811 GGATAACTTGGCATGGTGTCG 59.329 52.381 8.66 0.00 0.00 4.35
1625 1679 1.670811 CGGATAACTTGGCATGGTGTC 59.329 52.381 6.62 6.62 0.00 3.67
1627 1681 0.381801 GCGGATAACTTGGCATGGTG 59.618 55.000 0.47 0.00 0.00 4.17
1628 1682 0.255890 AGCGGATAACTTGGCATGGT 59.744 50.000 5.31 0.22 0.00 3.55
1629 1683 1.392589 AAGCGGATAACTTGGCATGG 58.607 50.000 5.31 0.00 0.00 3.66
1688 1956 0.446222 CACCGGTAAAATGTCCAGCG 59.554 55.000 6.87 0.00 0.00 5.18
1704 1972 2.419620 CCCCCAAAACGCAACACC 59.580 61.111 0.00 0.00 0.00 4.16
1705 1973 2.279851 GCCCCCAAAACGCAACAC 60.280 61.111 0.00 0.00 0.00 3.32
1712 1987 1.468506 AACACCATCGCCCCCAAAAC 61.469 55.000 0.00 0.00 0.00 2.43
1726 2001 0.455410 TGAGCACAGCACAAAACACC 59.545 50.000 0.00 0.00 0.00 4.16
1737 2012 5.473504 ACTTGGGTAGTTAAAATGAGCACAG 59.526 40.000 0.00 0.00 31.29 3.66
1750 2025 7.493645 GCGTTATACTTTCATACTTGGGTAGTT 59.506 37.037 0.00 0.00 38.33 2.24
1751 2026 6.982724 GCGTTATACTTTCATACTTGGGTAGT 59.017 38.462 0.00 0.00 41.04 2.73
1763 2038 2.835764 ACCCAGGAGCGTTATACTTTCA 59.164 45.455 0.00 0.00 0.00 2.69
1768 2043 2.692041 AGTACACCCAGGAGCGTTATAC 59.308 50.000 0.00 0.00 0.00 1.47
1770 2045 1.755380 GAGTACACCCAGGAGCGTTAT 59.245 52.381 0.00 0.00 0.00 1.89
1805 2081 7.019774 ACACAATATTCCTGTCATCAAATCG 57.980 36.000 0.00 0.00 0.00 3.34
1852 2128 3.494045 GCTATTGCTTTCAGGTCCAAC 57.506 47.619 0.00 0.00 36.03 3.77
1938 2214 7.334858 AGCCCAATAAGAGAAAACAAAAACAA 58.665 30.769 0.00 0.00 0.00 2.83
1964 2240 7.759433 CACAAAACCTTTAAATATAGCACCAGG 59.241 37.037 0.00 0.00 0.00 4.45
1979 2255 8.626526 ACGACACTAAATATTCACAAAACCTTT 58.373 29.630 0.00 0.00 0.00 3.11
1980 2256 8.161699 ACGACACTAAATATTCACAAAACCTT 57.838 30.769 0.00 0.00 0.00 3.50
1982 2258 7.744715 CAGACGACACTAAATATTCACAAAACC 59.255 37.037 0.00 0.00 0.00 3.27
1983 2259 7.744715 CCAGACGACACTAAATATTCACAAAAC 59.255 37.037 0.00 0.00 0.00 2.43
1984 2260 7.442969 ACCAGACGACACTAAATATTCACAAAA 59.557 33.333 0.00 0.00 0.00 2.44
1985 2261 6.932400 ACCAGACGACACTAAATATTCACAAA 59.068 34.615 0.00 0.00 0.00 2.83
1986 2262 6.367695 CACCAGACGACACTAAATATTCACAA 59.632 38.462 0.00 0.00 0.00 3.33
1987 2263 5.867174 CACCAGACGACACTAAATATTCACA 59.133 40.000 0.00 0.00 0.00 3.58
1988 2264 5.220416 GCACCAGACGACACTAAATATTCAC 60.220 44.000 0.00 0.00 0.00 3.18
1989 2265 4.868171 GCACCAGACGACACTAAATATTCA 59.132 41.667 0.00 0.00 0.00 2.57
1990 2266 5.109903 AGCACCAGACGACACTAAATATTC 58.890 41.667 0.00 0.00 0.00 1.75
1993 2269 5.847111 ATAGCACCAGACGACACTAAATA 57.153 39.130 0.00 0.00 0.00 1.40
1994 2270 4.737855 ATAGCACCAGACGACACTAAAT 57.262 40.909 0.00 0.00 0.00 1.40
1999 2275 3.802685 GGAAATATAGCACCAGACGACAC 59.197 47.826 0.00 0.00 0.00 3.67
2000 2276 3.490249 CGGAAATATAGCACCAGACGACA 60.490 47.826 0.00 0.00 0.00 4.35
2001 2277 3.050619 CGGAAATATAGCACCAGACGAC 58.949 50.000 0.00 0.00 0.00 4.34
2002 2278 2.953648 TCGGAAATATAGCACCAGACGA 59.046 45.455 0.00 0.00 0.00 4.20
2003 2279 3.364889 TCGGAAATATAGCACCAGACG 57.635 47.619 0.00 0.00 0.00 4.18
2004 2280 5.353123 TGTTTTCGGAAATATAGCACCAGAC 59.647 40.000 3.67 0.00 0.00 3.51
2006 2282 5.811399 TGTTTTCGGAAATATAGCACCAG 57.189 39.130 3.67 0.00 0.00 4.00
2007 2283 5.298276 GGATGTTTTCGGAAATATAGCACCA 59.702 40.000 3.67 0.00 28.21 4.17
2008 2284 5.298276 TGGATGTTTTCGGAAATATAGCACC 59.702 40.000 3.67 0.00 28.21 5.01
2021 2297 8.479280 CAAAGTGATAAAACTTGGATGTTTTCG 58.521 33.333 8.36 0.00 43.95 3.46
2028 2304 6.424812 GCAAAGCAAAGTGATAAAACTTGGAT 59.575 34.615 0.00 0.00 40.28 3.41
2049 2325 3.423539 AGACTTGTGGATGCTAGCAAA 57.576 42.857 23.54 10.11 0.00 3.68
2050 2326 4.760530 ATAGACTTGTGGATGCTAGCAA 57.239 40.909 23.54 1.65 0.00 3.91
2051 2327 4.080919 ACAATAGACTTGTGGATGCTAGCA 60.081 41.667 21.85 21.85 0.00 3.49
2052 2328 4.272018 CACAATAGACTTGTGGATGCTAGC 59.728 45.833 8.10 8.10 44.33 3.42
2053 2329 5.980698 CACAATAGACTTGTGGATGCTAG 57.019 43.478 9.65 0.00 44.33 3.42
2079 2355 2.490903 GCAGGATTCACAAAGACATGCT 59.509 45.455 0.00 0.00 0.00 3.79
2115 2405 6.174049 AGTCTCAAATCTTTTACCAGGCTAC 58.826 40.000 0.00 0.00 0.00 3.58
2171 2465 6.552859 TTTCTCAGCGAATGAACACAAATA 57.447 33.333 0.00 0.00 37.52 1.40
2179 2473 6.873605 TGTTCTCTAATTTCTCAGCGAATGAA 59.126 34.615 0.00 0.00 37.52 2.57
2220 2514 4.215399 TCAACTCACCATCGGATCAAAAAC 59.785 41.667 0.00 0.00 0.00 2.43
2378 2688 2.979813 GTGCAGGTTTTAAACAGCATCG 59.020 45.455 22.73 2.97 42.85 3.84
2379 2689 3.005791 AGGTGCAGGTTTTAAACAGCATC 59.994 43.478 22.73 22.18 42.85 3.91
2394 2704 9.881649 ACTATTGATTATCATATACAGGTGCAG 57.118 33.333 0.00 0.00 0.00 4.41
2468 2778 9.603921 ATGATCATGGTCCAATTATTTGTTTTC 57.396 29.630 7.59 0.00 0.00 2.29
2478 2788 4.960469 AGAGCAAATGATCATGGTCCAATT 59.040 37.500 19.80 3.36 43.30 2.32
2482 2792 3.285484 ACAGAGCAAATGATCATGGTCC 58.715 45.455 19.80 6.40 43.30 4.46
2491 2801 3.633525 ACAGCAAAAGACAGAGCAAATGA 59.366 39.130 0.00 0.00 0.00 2.57
2522 2833 9.518906 CATATATGCTGCTGAACAAATTTACAA 57.481 29.630 0.00 0.00 0.00 2.41
2530 2841 5.277297 GCGTAACATATATGCTGCTGAACAA 60.277 40.000 12.79 0.00 0.00 2.83
2552 2863 3.893720 AGAATGTCAGCAAAGAAAAGCG 58.106 40.909 0.00 0.00 35.48 4.68
2720 3035 2.538449 CGTACAATACCATCTCCAACGC 59.462 50.000 0.00 0.00 0.00 4.84
2729 3044 3.920446 TCATATGCGCGTACAATACCAT 58.080 40.909 12.39 2.10 0.00 3.55
2806 3121 1.636148 ACCCTAACCGCTTAGTGTCA 58.364 50.000 0.00 0.00 0.00 3.58
2867 3182 9.103861 GAGGATCTTTTATACTGAGTGAAAAGG 57.896 37.037 23.04 12.80 38.72 3.11
2873 3188 8.970859 ATTTGGAGGATCTTTTATACTGAGTG 57.029 34.615 0.00 0.00 33.73 3.51
2882 3197 8.482943 TGAAGACGATATTTGGAGGATCTTTTA 58.517 33.333 0.00 0.00 33.73 1.52
2889 3204 4.709886 TGACTGAAGACGATATTTGGAGGA 59.290 41.667 0.00 0.00 0.00 3.71
2894 3209 9.611284 TTTTTCAATGACTGAAGACGATATTTG 57.389 29.630 0.00 0.00 44.84 2.32
2902 3217 8.801715 TGCTTTATTTTTCAATGACTGAAGAC 57.198 30.769 0.00 0.00 44.84 3.01
2963 3278 8.117813 TCAACTGATACCCAAGGAATTTTAAC 57.882 34.615 0.00 0.00 0.00 2.01
3013 3340 3.319122 AGAAGGCCACTGAATCAAAACAC 59.681 43.478 5.01 0.00 0.00 3.32
3085 3425 7.171678 GCATCAGTGTGTAATTAGGAGGATAAC 59.828 40.741 0.00 0.00 0.00 1.89
3128 3468 3.820467 CTCCAGTGCAAACCTGATAACAA 59.180 43.478 4.45 0.00 31.38 2.83
3194 3534 7.450074 TGTATGAAAGGAAAGAAAGCTAGACA 58.550 34.615 0.00 0.00 0.00 3.41
3282 3622 2.224843 TGCAGGAAATCCAAGCTTCTGA 60.225 45.455 11.96 5.60 39.21 3.27
3294 3634 5.543790 AGGTACCTTGAATTTTGCAGGAAAT 59.456 36.000 9.21 0.00 0.00 2.17
3393 3733 4.161189 TCTGGATCTTGAAGTCCTGACATC 59.839 45.833 14.50 0.00 37.49 3.06
3548 3888 5.970317 TCCGGGAAAGAAAGAAAAATACC 57.030 39.130 0.00 0.00 0.00 2.73
3567 3907 4.993029 ACAAGGAGATAGAGAAGTTCCG 57.007 45.455 0.00 0.00 33.16 4.30
3783 4123 8.319057 TCACCTGGAAAGATAATAGCTTAGAA 57.681 34.615 0.00 0.00 0.00 2.10
3795 4135 4.466015 GTCTCTTCTCTCACCTGGAAAGAT 59.534 45.833 0.00 0.00 0.00 2.40
3801 4141 4.019858 TGTATGTCTCTTCTCTCACCTGG 58.980 47.826 0.00 0.00 0.00 4.45
3802 4142 4.142271 GGTGTATGTCTCTTCTCTCACCTG 60.142 50.000 0.00 0.00 40.30 4.00
3825 4165 4.169508 CAGGATATATGTTCTCGAAGGCG 58.830 47.826 0.00 0.00 39.35 5.52
3898 4238 1.593933 GCAATGCCCATTAAACATGCG 59.406 47.619 0.00 0.00 0.00 4.73
3912 4252 4.144297 TCCTATTCCCAACATAGCAATGC 58.856 43.478 0.00 0.00 36.50 3.56
4057 4397 4.935808 ACCATTAGTTTCTGAAAGTAGCCG 59.064 41.667 15.18 10.11 33.76 5.52
4126 4466 4.560108 GCAACAATGTCTCCAATTCTGCTT 60.560 41.667 0.00 0.00 0.00 3.91
4141 4481 3.625318 AGCTGGCAGCAAGCAACAATG 62.625 52.381 38.09 0.00 45.56 2.82
4189 4529 2.241171 GGTTTTCCACCGGAAGACG 58.759 57.895 9.46 0.00 44.54 4.18
4238 4578 3.127548 TCGATTACGACAACAGGTACTCC 59.872 47.826 0.00 0.00 43.81 3.85
4268 4608 6.012113 ACCATGATCCATCACAAAAAGAAGA 58.988 36.000 0.00 0.00 40.03 2.87
4306 4647 4.827284 TGACAGAATAGACCTGCGATGATA 59.173 41.667 0.00 0.00 35.14 2.15
4307 4648 3.638627 TGACAGAATAGACCTGCGATGAT 59.361 43.478 0.00 0.00 35.14 2.45
4309 4650 3.443099 TGACAGAATAGACCTGCGATG 57.557 47.619 0.00 0.00 35.14 3.84
4310 4651 3.244009 CCATGACAGAATAGACCTGCGAT 60.244 47.826 0.00 0.00 35.14 4.58
4313 4654 2.216898 GCCATGACAGAATAGACCTGC 58.783 52.381 0.00 0.00 35.14 4.85
4314 4655 3.548745 TGCCATGACAGAATAGACCTG 57.451 47.619 0.00 0.00 37.64 4.00
4315 4656 3.244009 CGATGCCATGACAGAATAGACCT 60.244 47.826 0.00 0.00 0.00 3.85
4316 4657 3.062763 CGATGCCATGACAGAATAGACC 58.937 50.000 0.00 0.00 0.00 3.85
4317 4658 3.722147 ACGATGCCATGACAGAATAGAC 58.278 45.455 0.00 0.00 0.00 2.59
4318 4659 3.243873 GGACGATGCCATGACAGAATAGA 60.244 47.826 0.00 0.00 0.00 1.98
4319 4660 3.062763 GGACGATGCCATGACAGAATAG 58.937 50.000 0.00 0.00 0.00 1.73
4320 4661 2.224281 GGGACGATGCCATGACAGAATA 60.224 50.000 0.00 0.00 0.00 1.75
4321 4662 1.475751 GGGACGATGCCATGACAGAAT 60.476 52.381 0.00 0.00 0.00 2.40
4322 4663 0.107703 GGGACGATGCCATGACAGAA 60.108 55.000 0.00 0.00 0.00 3.02
4323 4664 0.977627 AGGGACGATGCCATGACAGA 60.978 55.000 0.00 0.00 0.00 3.41
4324 4665 0.531532 GAGGGACGATGCCATGACAG 60.532 60.000 0.00 0.00 0.00 3.51
4325 4666 1.264045 TGAGGGACGATGCCATGACA 61.264 55.000 0.00 0.00 0.00 3.58
4326 4667 0.811616 GTGAGGGACGATGCCATGAC 60.812 60.000 0.00 0.00 0.00 3.06
4327 4668 0.977627 AGTGAGGGACGATGCCATGA 60.978 55.000 0.00 0.00 0.00 3.07
4328 4669 0.531532 GAGTGAGGGACGATGCCATG 60.532 60.000 0.00 0.00 0.00 3.66
4329 4670 1.826024 GAGTGAGGGACGATGCCAT 59.174 57.895 0.00 0.00 0.00 4.40
4330 4671 2.710902 CGAGTGAGGGACGATGCCA 61.711 63.158 0.00 0.00 0.00 4.92
4331 4672 1.945354 TTCGAGTGAGGGACGATGCC 61.945 60.000 0.00 0.00 36.02 4.40
4332 4673 0.108804 TTTCGAGTGAGGGACGATGC 60.109 55.000 0.00 0.00 36.02 3.91
4339 4680 2.224066 ACAAGAGTGTTTCGAGTGAGGG 60.224 50.000 0.00 0.00 32.58 4.30
4424 4766 1.199789 GCTGGCGTTTTCATCATCACA 59.800 47.619 0.00 0.00 0.00 3.58
4425 4767 1.470098 AGCTGGCGTTTTCATCATCAC 59.530 47.619 0.00 0.00 0.00 3.06
4438 4780 3.657634 AGTGAATATACATCAGCTGGCG 58.342 45.455 15.13 7.84 0.00 5.69
4455 4797 0.856641 GCAAACGCGTCTACAAGTGA 59.143 50.000 14.44 0.00 0.00 3.41
4456 4798 3.345087 GCAAACGCGTCTACAAGTG 57.655 52.632 14.44 3.57 0.00 3.16
4507 4849 9.860898 ATAACACAAATTTTCCTCTTGCTATTC 57.139 29.630 0.00 0.00 0.00 1.75
4538 4880 0.036010 CCGAGACAGCACAAAGGGAT 60.036 55.000 0.00 0.00 0.00 3.85
4549 4891 0.732880 AAATGCGACGACCGAGACAG 60.733 55.000 0.00 0.00 41.76 3.51
4569 4911 2.666022 GCAAATGTTAAATGGTCGGCAC 59.334 45.455 0.00 0.00 0.00 5.01
4572 4914 2.162608 TCGGCAAATGTTAAATGGTCGG 59.837 45.455 0.00 0.00 0.00 4.79
4575 4938 7.443879 AGAAATTTTCGGCAAATGTTAAATGGT 59.556 29.630 3.57 0.00 35.09 3.55
4591 4954 7.406799 AAGGCAAACATTACAGAAATTTTCG 57.593 32.000 3.57 2.27 34.02 3.46
4597 4960 5.233263 GCGAAAAAGGCAAACATTACAGAAA 59.767 36.000 0.00 0.00 0.00 2.52
4620 4983 3.091545 TGATGATTCTGGTTGAAAGGGC 58.908 45.455 0.00 0.00 38.29 5.19
4667 5035 5.794945 GCTTTTTCTTGCTTTTGTGGTTTTC 59.205 36.000 0.00 0.00 0.00 2.29
4687 5055 1.034356 TTGTGAGCATGTGCAGCTTT 58.966 45.000 7.83 0.00 43.58 3.51
4751 5189 4.627284 TTTTCGTACTGATTTCCCTCCA 57.373 40.909 0.00 0.00 0.00 3.86
4774 5212 3.595819 GCAGCGAGGCCTTTCAAT 58.404 55.556 6.77 0.00 0.00 2.57
4783 5221 0.321122 AGAAAACAGAGGCAGCGAGG 60.321 55.000 0.00 0.00 0.00 4.63
4799 5237 1.681793 GCCGTATGAGCTAGGACAGAA 59.318 52.381 0.00 0.00 0.00 3.02
4826 5264 7.010460 GCCCAGTTTTGCATTACATTTATTCTC 59.990 37.037 0.00 0.00 0.00 2.87
4848 5286 0.469705 ATGTGTTGCTCCTTTGCCCA 60.470 50.000 0.00 0.00 0.00 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.