Multiple sequence alignment - TraesCS5B01G017800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G017800 chr5B 100.000 9172 0 0 1 9172 16430449 16421278 0.000000e+00 16938.0
1 TraesCS5B01G017800 chr5B 91.119 867 49 12 3 847 28211523 28212383 0.000000e+00 1149.0
2 TraesCS5B01G017800 chr5A 92.248 3728 146 51 923 4610 16987690 16984066 0.000000e+00 5151.0
3 TraesCS5B01G017800 chr5A 94.087 1742 81 10 4609 6346 16984026 16982303 0.000000e+00 2627.0
4 TraesCS5B01G017800 chr5A 94.092 931 40 4 7263 8186 16981584 16980662 0.000000e+00 1400.0
5 TraesCS5B01G017800 chr5A 95.590 703 21 4 6496 7195 16982306 16981611 0.000000e+00 1118.0
6 TraesCS5B01G017800 chr5A 82.635 334 43 11 8669 8997 16977006 16976683 1.950000e-71 281.0
7 TraesCS5B01G017800 chr5D 90.690 3523 166 52 958 4438 23083968 23080566 0.000000e+00 4540.0
8 TraesCS5B01G017800 chr5D 95.310 1919 71 9 4438 6346 23080119 23078210 0.000000e+00 3027.0
9 TraesCS5B01G017800 chr5D 95.158 950 36 4 7259 8208 23077489 23076550 0.000000e+00 1491.0
10 TraesCS5B01G017800 chr5D 94.374 711 20 5 6496 7195 23078213 23077512 0.000000e+00 1074.0
11 TraesCS5B01G017800 chr5D 82.494 834 64 19 8207 8997 23076488 23075694 0.000000e+00 656.0
12 TraesCS5B01G017800 chr5D 90.270 185 11 6 8992 9172 23075660 23075479 1.540000e-57 235.0
13 TraesCS5B01G017800 chr5D 96.875 32 0 1 846 877 321857348 321857378 1.700000e-02 52.8
14 TraesCS5B01G017800 chr6B 90.400 875 75 7 4303 5176 664538614 664537748 0.000000e+00 1142.0
15 TraesCS5B01G017800 chr6B 82.797 1244 141 43 2271 3499 664543549 664542364 0.000000e+00 1044.0
16 TraesCS5B01G017800 chr6B 85.225 934 117 12 7243 8173 664527095 664526180 0.000000e+00 941.0
17 TraesCS5B01G017800 chr6B 86.702 752 72 19 5183 5928 664537664 664536935 0.000000e+00 809.0
18 TraesCS5B01G017800 chr6B 88.110 656 55 9 6496 7134 664527848 664527199 0.000000e+00 758.0
19 TraesCS5B01G017800 chr6B 82.812 832 95 18 1436 2258 664581794 664581002 0.000000e+00 701.0
20 TraesCS5B01G017800 chr6B 85.413 521 45 16 3501 3998 664542243 664541731 6.350000e-141 512.0
21 TraesCS5B01G017800 chr6B 84.530 362 51 2 5970 6331 664528217 664527861 4.070000e-93 353.0
22 TraesCS5B01G017800 chr6B 81.546 401 59 13 10 404 59103115 59102724 5.350000e-82 316.0
23 TraesCS5B01G017800 chr6B 91.813 171 7 3 6341 6504 720912220 720912050 1.990000e-56 231.0
24 TraesCS5B01G017800 chr6B 86.190 210 24 5 5926 6131 664528415 664528207 1.200000e-53 222.0
25 TraesCS5B01G017800 chr6B 91.489 94 5 1 1066 1159 664582200 664582110 9.670000e-25 126.0
26 TraesCS5B01G017800 chr6B 92.063 63 5 0 1205 1267 664582094 664582032 1.270000e-13 89.8
27 TraesCS5B01G017800 chr6D 87.080 952 105 14 7241 8190 439664512 439663577 0.000000e+00 1061.0
28 TraesCS5B01G017800 chr6D 94.771 153 6 1 6331 6483 21051960 21052110 4.280000e-58 237.0
29 TraesCS5B01G017800 chr6D 79.603 353 55 15 10 355 152273107 152272765 4.280000e-58 237.0
30 TraesCS5B01G017800 chr6D 91.000 100 6 1 1062 1161 439664748 439664652 2.080000e-26 132.0
31 TraesCS5B01G017800 chr6D 97.297 37 0 1 846 881 389530720 389530684 2.770000e-05 62.1
32 TraesCS5B01G017800 chr6A 86.554 766 82 13 7428 8190 587976155 587975408 0.000000e+00 824.0
33 TraesCS5B01G017800 chr6A 88.571 175 20 0 7243 7417 587976864 587976690 7.210000e-51 213.0
34 TraesCS5B01G017800 chr6A 92.000 75 6 0 1192 1266 587977005 587976931 1.260000e-18 106.0
35 TraesCS5B01G017800 chr4D 82.770 888 81 26 1 860 467741473 467740630 0.000000e+00 726.0
36 TraesCS5B01G017800 chr4D 96.528 144 4 1 6341 6483 12520137 12520280 4.280000e-58 237.0
37 TraesCS5B01G017800 chr3B 81.588 869 97 36 3 847 448793636 448792807 0.000000e+00 660.0
38 TraesCS5B01G017800 chr3B 95.714 140 6 0 6344 6483 439445579 439445718 9.270000e-55 226.0
39 TraesCS5B01G017800 chr3B 84.444 90 7 5 766 848 754197473 754197562 2.120000e-11 82.4
40 TraesCS5B01G017800 chr3B 80.583 103 16 4 320 420 493845021 493844921 9.880000e-10 76.8
41 TraesCS5B01G017800 chr3B 100.000 35 0 0 846 880 486384991 486385025 2.140000e-06 65.8
42 TraesCS5B01G017800 chr7A 80.424 802 117 24 53 847 571426143 571425375 7.990000e-160 575.0
43 TraesCS5B01G017800 chr3A 83.192 589 63 16 1 560 468018539 468017958 2.960000e-139 507.0
44 TraesCS5B01G017800 chr3A 80.233 344 52 13 10 345 675186381 675186716 2.560000e-60 244.0
45 TraesCS5B01G017800 chr3A 78.667 375 64 14 15 381 476322015 476321649 1.540000e-57 235.0
46 TraesCS5B01G017800 chr3A 89.362 188 16 2 660 847 468017942 468017759 5.540000e-57 233.0
47 TraesCS5B01G017800 chr3A 91.538 130 8 3 720 849 179349527 179349401 9.470000e-40 176.0
48 TraesCS5B01G017800 chr3D 83.864 471 53 20 55 519 152057771 152057318 2.370000e-115 427.0
49 TraesCS5B01G017800 chr3D 97.297 37 0 1 846 881 447612036 447612072 2.770000e-05 62.1
50 TraesCS5B01G017800 chr2A 85.054 368 43 11 55 419 182694341 182693983 1.880000e-96 364.0
51 TraesCS5B01G017800 chr4B 93.413 167 4 3 6341 6500 135218046 135218212 3.310000e-59 241.0
52 TraesCS5B01G017800 chr4A 95.890 146 5 1 6339 6483 517406466 517406611 1.540000e-57 235.0
53 TraesCS5B01G017800 chr7D 91.061 179 6 5 6335 6506 488692765 488692590 5.540000e-57 233.0
54 TraesCS5B01G017800 chr7D 80.982 163 24 5 685 845 606747775 606747932 1.250000e-23 122.0
55 TraesCS5B01G017800 chr2B 92.638 163 5 3 6344 6499 66994805 66994643 2.580000e-55 228.0
56 TraesCS5B01G017800 chr1B 92.466 146 9 2 6339 6483 652464763 652464907 3.360000e-49 207.0
57 TraesCS5B01G017800 chr1A 83.654 208 28 4 640 847 241334196 241334397 3.380000e-44 191.0
58 TraesCS5B01G017800 chrUn 75.802 405 74 12 1431 1833 16373940 16373558 5.660000e-42 183.0
59 TraesCS5B01G017800 chr2D 76.970 165 18 6 685 848 500658024 500658169 9.880000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G017800 chr5B 16421278 16430449 9171 True 16938.000000 16938 100.000000 1 9172 1 chr5B.!!$R1 9171
1 TraesCS5B01G017800 chr5B 28211523 28212383 860 False 1149.000000 1149 91.119000 3 847 1 chr5B.!!$F1 844
2 TraesCS5B01G017800 chr5A 16976683 16987690 11007 True 2115.400000 5151 91.730400 923 8997 5 chr5A.!!$R1 8074
3 TraesCS5B01G017800 chr5D 23075479 23083968 8489 True 1837.166667 4540 91.382667 958 9172 6 chr5D.!!$R1 8214
4 TraesCS5B01G017800 chr6B 664536935 664543549 6614 True 876.750000 1142 86.328000 2271 5928 4 chr6B.!!$R4 3657
5 TraesCS5B01G017800 chr6B 664526180 664528415 2235 True 568.500000 941 86.013750 5926 8173 4 chr6B.!!$R3 2247
6 TraesCS5B01G017800 chr6B 664581002 664582200 1198 True 305.600000 701 88.788000 1066 2258 3 chr6B.!!$R5 1192
7 TraesCS5B01G017800 chr6D 439663577 439664748 1171 True 596.500000 1061 89.040000 1062 8190 2 chr6D.!!$R3 7128
8 TraesCS5B01G017800 chr6A 587975408 587977005 1597 True 381.000000 824 89.041667 1192 8190 3 chr6A.!!$R1 6998
9 TraesCS5B01G017800 chr4D 467740630 467741473 843 True 726.000000 726 82.770000 1 860 1 chr4D.!!$R1 859
10 TraesCS5B01G017800 chr3B 448792807 448793636 829 True 660.000000 660 81.588000 3 847 1 chr3B.!!$R1 844
11 TraesCS5B01G017800 chr7A 571425375 571426143 768 True 575.000000 575 80.424000 53 847 1 chr7A.!!$R1 794
12 TraesCS5B01G017800 chr3A 468017759 468018539 780 True 370.000000 507 86.277000 1 847 2 chr3A.!!$R3 846

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 1005 0.034960 GAGGGAGAGGGGAAAGTTGC 60.035 60.000 0.00 0.0 0.00 4.17 F
890 1013 0.318441 GGGGAAAGTTGCCTTTGAGC 59.682 55.000 0.00 0.0 40.98 4.26 F
891 1014 0.318441 GGGAAAGTTGCCTTTGAGCC 59.682 55.000 0.00 0.0 40.98 4.70 F
1359 1524 0.461135 CCAAGCCCCATTGCATACAC 59.539 55.000 0.00 0.0 0.00 2.90 F
1584 1792 0.865111 CTTGCGAATGACGGTGTTGA 59.135 50.000 0.00 0.0 42.83 3.18 F
1866 2094 1.065854 TGGAAGAGCTTCTAAGGCAGC 60.066 52.381 9.82 0.0 39.45 5.25 F
2363 2593 1.212751 GTTGGCGAATCTTGTGGCC 59.787 57.895 0.00 0.0 45.76 5.36 F
2976 3255 2.306847 TCTAGCTGTGTCAGTGTGTCA 58.693 47.619 0.00 0.0 33.43 3.58 F
3958 4376 2.159393 TCTGTCCATTTAAGCAATGCGC 60.159 45.455 0.00 0.0 41.10 6.09 F
3979 4409 3.372822 GCCAATGCCTGATGACATTTTTG 59.627 43.478 0.00 0.0 34.32 2.44 F
5239 9051 1.607178 CCAGCATGTCCAAAGGCCA 60.607 57.895 5.01 0.0 0.00 5.36 F
5472 9284 0.379669 CTTTGGCGCAGATGGCTTAG 59.620 55.000 10.83 0.0 41.67 2.18 F
7181 11182 1.067295 TCCTTCATCCCTGCAAGTGT 58.933 50.000 0.00 0.0 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2061 2291 0.314935 CCTGGCGAAAAACACTGCAT 59.685 50.000 0.00 0.00 0.00 3.96 R
2123 2353 1.561542 AGCTGACTATTTGGGTCCAGG 59.438 52.381 0.00 0.00 33.22 4.45 R
2426 2656 2.186826 CATCGGGTCGCCCATTTCC 61.187 63.158 14.17 0.00 45.83 3.13 R
2784 3024 2.803956 TGCATGATCACATATGACAGCG 59.196 45.455 10.38 1.95 37.79 5.18 R
3249 3531 4.155063 TCATGTGGTATGGTGGATGAAG 57.845 45.455 0.00 0.00 0.00 3.02 R
3674 4076 0.836606 TTGGGAGCTGTTCACTGTCA 59.163 50.000 0.00 0.00 0.00 3.58 R
3956 4374 0.742505 AATGTCATCAGGCATTGGCG 59.257 50.000 4.38 0.44 42.47 5.69 R
4640 8373 2.292292 TGCAAGGCATGAATCATCATCG 59.708 45.455 0.00 0.00 44.53 3.84 R
5239 9051 1.681229 TAGGGCCAAAGGAGACCAAT 58.319 50.000 6.18 0.00 0.00 3.16 R
5245 9057 2.024941 AGAACCATTAGGGCCAAAGGAG 60.025 50.000 6.18 0.00 42.05 3.69 R
6685 10680 1.912043 AGCTCTTGGAGGTTGTAGCAT 59.088 47.619 0.00 0.00 37.04 3.79 R
7281 11304 0.878416 TGAAAAGGGAATTCGCCACG 59.122 50.000 18.08 0.00 0.00 4.94 R
9146 17011 0.101040 TGTTGCTGTGTCTTTGCTGC 59.899 50.000 0.00 0.00 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 8.659491 GGCAAAAGGAACATTTTTCTGAATATC 58.341 33.333 0.00 0.00 30.01 1.63
210 235 8.783833 TTGAAACATGGAACTTTTCATCAAAA 57.216 26.923 8.68 0.00 38.65 2.44
324 356 8.458843 TGTAAAAGAACTTGAACTTCCTTTGAG 58.541 33.333 0.00 0.00 0.00 3.02
488 521 6.881065 TGTCTGAACAAATTCTGATAAGAGGG 59.119 38.462 0.79 0.00 42.61 4.30
573 607 9.838975 AAATTTGAAAAAGGCAAAAGTGTAAAG 57.161 25.926 0.00 0.00 38.57 1.85
648 689 9.639601 AAAGAAAACAGAGAAAGAAAACGAAAT 57.360 25.926 0.00 0.00 0.00 2.17
704 808 4.113354 CGGTGTAGGAACATTCTAGAAGC 58.887 47.826 11.53 0.63 38.08 3.86
756 860 1.857837 GTTCACAAAACCGGTGCAATG 59.142 47.619 8.52 7.79 36.22 2.82
794 898 2.796383 CGGCCCATTCGATCGATATCTC 60.796 54.545 20.18 8.48 0.00 2.75
847 970 1.239347 GCGGCAGATAGGATTTTCCC 58.761 55.000 0.00 0.00 37.19 3.97
848 971 1.512926 CGGCAGATAGGATTTTCCCG 58.487 55.000 0.00 0.00 37.19 5.14
850 973 0.868406 GCAGATAGGATTTTCCCGCG 59.132 55.000 0.00 0.00 37.19 6.46
851 974 0.868406 CAGATAGGATTTTCCCGCGC 59.132 55.000 0.00 0.00 37.19 6.86
852 975 0.600255 AGATAGGATTTTCCCGCGCG 60.600 55.000 25.67 25.67 37.19 6.86
853 976 0.599204 GATAGGATTTTCCCGCGCGA 60.599 55.000 34.63 11.85 37.19 5.87
854 977 0.600255 ATAGGATTTTCCCGCGCGAG 60.600 55.000 34.63 20.97 37.19 5.03
877 1000 2.040606 CGGGAGGGAGAGGGGAAA 59.959 66.667 0.00 0.00 0.00 3.13
878 1001 2.066999 CGGGAGGGAGAGGGGAAAG 61.067 68.421 0.00 0.00 0.00 2.62
879 1002 1.083141 GGGAGGGAGAGGGGAAAGT 59.917 63.158 0.00 0.00 0.00 2.66
880 1003 0.550393 GGGAGGGAGAGGGGAAAGTT 60.550 60.000 0.00 0.00 0.00 2.66
881 1004 0.621082 GGAGGGAGAGGGGAAAGTTG 59.379 60.000 0.00 0.00 0.00 3.16
882 1005 0.034960 GAGGGAGAGGGGAAAGTTGC 60.035 60.000 0.00 0.00 0.00 4.17
883 1006 1.000771 GGGAGAGGGGAAAGTTGCC 60.001 63.158 0.00 0.00 38.05 4.52
884 1007 1.501654 GGGAGAGGGGAAAGTTGCCT 61.502 60.000 0.00 0.00 38.90 4.75
885 1008 0.405973 GGAGAGGGGAAAGTTGCCTT 59.594 55.000 0.00 0.00 38.90 4.35
886 1009 1.203063 GGAGAGGGGAAAGTTGCCTTT 60.203 52.381 0.00 0.00 43.58 3.11
887 1010 1.889170 GAGAGGGGAAAGTTGCCTTTG 59.111 52.381 0.00 0.00 40.98 2.77
888 1011 1.499007 AGAGGGGAAAGTTGCCTTTGA 59.501 47.619 0.00 0.00 40.98 2.69
889 1012 1.889170 GAGGGGAAAGTTGCCTTTGAG 59.111 52.381 0.00 0.00 40.98 3.02
890 1013 0.318441 GGGGAAAGTTGCCTTTGAGC 59.682 55.000 0.00 0.00 40.98 4.26
891 1014 0.318441 GGGAAAGTTGCCTTTGAGCC 59.682 55.000 0.00 0.00 40.98 4.70
892 1015 0.318441 GGAAAGTTGCCTTTGAGCCC 59.682 55.000 0.00 0.00 40.98 5.19
893 1016 1.039856 GAAAGTTGCCTTTGAGCCCA 58.960 50.000 0.00 0.00 40.98 5.36
894 1017 0.752658 AAAGTTGCCTTTGAGCCCAC 59.247 50.000 0.00 0.00 39.44 4.61
895 1018 1.455383 AAGTTGCCTTTGAGCCCACG 61.455 55.000 0.00 0.00 0.00 4.94
896 1019 1.896660 GTTGCCTTTGAGCCCACGA 60.897 57.895 0.00 0.00 0.00 4.35
897 1020 1.600636 TTGCCTTTGAGCCCACGAG 60.601 57.895 0.00 0.00 0.00 4.18
898 1021 2.032681 GCCTTTGAGCCCACGAGT 59.967 61.111 0.00 0.00 0.00 4.18
899 1022 2.328099 GCCTTTGAGCCCACGAGTG 61.328 63.158 0.00 0.00 0.00 3.51
900 1023 2.328099 CCTTTGAGCCCACGAGTGC 61.328 63.158 0.00 0.00 0.00 4.40
901 1024 2.664851 TTTGAGCCCACGAGTGCG 60.665 61.111 0.00 0.00 44.79 5.34
902 1025 3.158537 TTTGAGCCCACGAGTGCGA 62.159 57.895 0.00 0.00 41.64 5.10
903 1026 3.573772 TTGAGCCCACGAGTGCGAG 62.574 63.158 0.00 0.00 41.64 5.03
908 1031 4.056125 CCACGAGTGCGAGCCTGA 62.056 66.667 0.00 0.00 41.64 3.86
909 1032 2.049156 CACGAGTGCGAGCCTGAA 60.049 61.111 0.00 0.00 41.64 3.02
910 1033 1.664649 CACGAGTGCGAGCCTGAAA 60.665 57.895 0.00 0.00 41.64 2.69
911 1034 1.373497 ACGAGTGCGAGCCTGAAAG 60.373 57.895 0.00 0.00 41.64 2.62
912 1035 2.734673 CGAGTGCGAGCCTGAAAGC 61.735 63.158 0.00 0.00 40.82 3.51
913 1036 2.359230 AGTGCGAGCCTGAAAGCC 60.359 61.111 0.00 0.00 0.00 4.35
914 1037 3.435186 GTGCGAGCCTGAAAGCCC 61.435 66.667 0.00 0.00 0.00 5.19
916 1039 4.760047 GCGAGCCTGAAAGCCCGA 62.760 66.667 0.00 0.00 0.00 5.14
917 1040 2.047274 CGAGCCTGAAAGCCCGAA 60.047 61.111 0.00 0.00 0.00 4.30
918 1041 2.103042 CGAGCCTGAAAGCCCGAAG 61.103 63.158 0.00 0.00 0.00 3.79
919 1042 2.360475 AGCCTGAAAGCCCGAAGC 60.360 61.111 0.00 0.00 44.25 3.86
920 1043 3.443925 GCCTGAAAGCCCGAAGCC 61.444 66.667 0.00 0.00 45.47 4.35
921 1044 2.034066 CCTGAAAGCCCGAAGCCA 59.966 61.111 0.00 0.00 45.47 4.75
941 1064 2.689034 CTCGCTCCCCTCCCCTTT 60.689 66.667 0.00 0.00 0.00 3.11
949 1072 2.941025 CCTCCCCTTTCCCAGCCA 60.941 66.667 0.00 0.00 0.00 4.75
1284 1424 4.087892 CCGTGCCCCCTCTCACTG 62.088 72.222 0.00 0.00 0.00 3.66
1285 1425 4.767255 CGTGCCCCCTCTCACTGC 62.767 72.222 0.00 0.00 0.00 4.40
1310 1454 1.536418 TGTGCTCCCACTGCTACCT 60.536 57.895 0.00 0.00 42.54 3.08
1324 1489 2.280628 GCTACCTTTCGGTGGAGATTG 58.719 52.381 0.00 0.00 43.98 2.67
1359 1524 0.461135 CCAAGCCCCATTGCATACAC 59.539 55.000 0.00 0.00 0.00 2.90
1364 1529 3.225104 AGCCCCATTGCATACACTAATG 58.775 45.455 0.00 0.00 0.00 1.90
1365 1530 2.958355 GCCCCATTGCATACACTAATGT 59.042 45.455 0.00 0.00 43.30 2.71
1366 1531 4.141274 AGCCCCATTGCATACACTAATGTA 60.141 41.667 0.00 0.00 45.37 2.29
1367 1532 4.023193 GCCCCATTGCATACACTAATGTAC 60.023 45.833 0.00 0.00 44.11 2.90
1368 1533 5.376625 CCCCATTGCATACACTAATGTACT 58.623 41.667 0.00 0.00 44.11 2.73
1369 1534 5.470098 CCCCATTGCATACACTAATGTACTC 59.530 44.000 0.00 0.00 44.11 2.59
1471 1679 5.103290 TGTTTGCCAGTTTAGTCGATTTC 57.897 39.130 0.00 0.00 0.00 2.17
1488 1696 7.008086 AGTCGATTTCGTTATTGTAACTTCTCG 59.992 37.037 0.00 0.00 40.80 4.04
1492 1700 8.761575 ATTTCGTTATTGTAACTTCTCGGTAA 57.238 30.769 0.00 0.00 0.00 2.85
1498 1706 3.909430 TGTAACTTCTCGGTAACTGCTG 58.091 45.455 0.00 0.00 0.00 4.41
1550 1758 3.482156 AGCCACATTATCGCTGATTCT 57.518 42.857 0.00 0.00 0.00 2.40
1551 1759 3.397482 AGCCACATTATCGCTGATTCTC 58.603 45.455 0.00 0.00 0.00 2.87
1552 1760 3.070734 AGCCACATTATCGCTGATTCTCT 59.929 43.478 0.00 0.00 0.00 3.10
1553 1761 4.281941 AGCCACATTATCGCTGATTCTCTA 59.718 41.667 0.00 0.00 0.00 2.43
1554 1762 5.046735 AGCCACATTATCGCTGATTCTCTAT 60.047 40.000 0.00 0.00 0.00 1.98
1555 1763 5.063186 GCCACATTATCGCTGATTCTCTATG 59.937 44.000 0.00 0.00 0.00 2.23
1556 1764 5.579904 CCACATTATCGCTGATTCTCTATGG 59.420 44.000 0.00 0.00 0.00 2.74
1557 1765 5.063186 CACATTATCGCTGATTCTCTATGGC 59.937 44.000 0.00 0.00 0.00 4.40
1584 1792 0.865111 CTTGCGAATGACGGTGTTGA 59.135 50.000 0.00 0.00 42.83 3.18
1646 1858 9.566530 TTCATTAATACATTTGTTGTTGATCGG 57.433 29.630 0.00 0.00 39.87 4.18
1647 1859 8.951243 TCATTAATACATTTGTTGTTGATCGGA 58.049 29.630 0.00 0.00 39.87 4.55
1648 1860 9.734620 CATTAATACATTTGTTGTTGATCGGAT 57.265 29.630 0.00 0.00 39.87 4.18
1649 1861 9.950680 ATTAATACATTTGTTGTTGATCGGATC 57.049 29.630 11.07 11.07 39.87 3.36
1650 1862 7.630242 AATACATTTGTTGTTGATCGGATCT 57.370 32.000 18.16 0.00 39.87 2.75
1651 1863 5.300969 ACATTTGTTGTTGATCGGATCTG 57.699 39.130 18.16 7.81 33.74 2.90
1670 1882 6.989169 GGATCTGTTGCATGTAGTTCTTCTAT 59.011 38.462 0.00 0.00 0.00 1.98
1730 1942 2.264005 TCGTGGCCTTGTGTGTATTT 57.736 45.000 3.32 0.00 0.00 1.40
1777 1989 3.903090 TCCCTCTCCAATGCAACATTTTT 59.097 39.130 0.00 0.00 0.00 1.94
1778 1990 5.083122 TCCCTCTCCAATGCAACATTTTTA 58.917 37.500 0.00 0.00 0.00 1.52
1779 1991 5.047377 TCCCTCTCCAATGCAACATTTTTAC 60.047 40.000 0.00 0.00 0.00 2.01
1780 1992 5.047092 CCCTCTCCAATGCAACATTTTTACT 60.047 40.000 0.00 0.00 0.00 2.24
1781 1993 6.095377 CCTCTCCAATGCAACATTTTTACTC 58.905 40.000 0.00 0.00 0.00 2.59
1782 1994 6.294675 CCTCTCCAATGCAACATTTTTACTCA 60.295 38.462 0.00 0.00 0.00 3.41
1783 1995 7.230849 TCTCCAATGCAACATTTTTACTCAT 57.769 32.000 0.00 0.00 0.00 2.90
1784 1996 8.347004 TCTCCAATGCAACATTTTTACTCATA 57.653 30.769 0.00 0.00 0.00 2.15
1785 1997 8.461222 TCTCCAATGCAACATTTTTACTCATAG 58.539 33.333 0.00 0.00 0.00 2.23
1786 1998 8.347004 TCCAATGCAACATTTTTACTCATAGA 57.653 30.769 0.00 0.00 0.00 1.98
1787 1999 8.970020 TCCAATGCAACATTTTTACTCATAGAT 58.030 29.630 0.00 0.00 0.00 1.98
1788 2000 9.027129 CCAATGCAACATTTTTACTCATAGATG 57.973 33.333 0.00 0.00 0.00 2.90
1789 2001 9.577110 CAATGCAACATTTTTACTCATAGATGT 57.423 29.630 0.00 0.00 0.00 3.06
1790 2002 9.793252 AATGCAACATTTTTACTCATAGATGTC 57.207 29.630 0.00 0.00 0.00 3.06
1791 2003 8.565896 TGCAACATTTTTACTCATAGATGTCT 57.434 30.769 0.00 0.00 0.00 3.41
1792 2004 9.013229 TGCAACATTTTTACTCATAGATGTCTT 57.987 29.630 0.00 0.00 0.00 3.01
1857 2085 3.191539 CGCCGCTGGAAGAGCTTC 61.192 66.667 1.62 1.62 46.64 3.86
1866 2094 1.065854 TGGAAGAGCTTCTAAGGCAGC 60.066 52.381 9.82 0.00 39.45 5.25
1907 2135 3.030291 AGTGAATGGTTGGCTTTGTGAA 58.970 40.909 0.00 0.00 0.00 3.18
2004 2234 5.189180 AGCTTCACAGTAAGGATGGATTTC 58.811 41.667 0.00 0.00 0.00 2.17
2032 2262 9.015146 AGTCCTTGGTATTCCCTTCTTAATATT 57.985 33.333 0.00 0.00 0.00 1.28
2061 2291 3.199946 CCTCCCAAATAGACAGCTTACCA 59.800 47.826 0.00 0.00 0.00 3.25
2114 2344 1.609783 GGAGGGTGGGAATGTGGAG 59.390 63.158 0.00 0.00 0.00 3.86
2123 2353 3.633986 GTGGGAATGTGGAGGATGAATTC 59.366 47.826 0.00 0.00 0.00 2.17
2178 2408 2.289565 GTTGCTGTATACTGGCCTTCC 58.710 52.381 3.32 0.00 0.00 3.46
2228 2458 2.025981 AGAATATTGCACTCACAGCCCA 60.026 45.455 0.00 0.00 0.00 5.36
2251 2481 9.039165 CCCATTCTTTTGATATTTATATGCCCT 57.961 33.333 0.00 0.00 0.00 5.19
2333 2563 3.092301 AGGCTGAAAATTCTTGTAGGGC 58.908 45.455 0.00 0.00 0.00 5.19
2363 2593 1.212751 GTTGGCGAATCTTGTGGCC 59.787 57.895 0.00 0.00 45.76 5.36
2426 2656 7.636150 AGATGAGGACTTTAATGGTGAAATG 57.364 36.000 0.00 0.00 0.00 2.32
2592 2822 9.793259 TTGATGAAGGTAAACTTGAACTCTAAT 57.207 29.630 0.00 0.00 40.21 1.73
2640 2880 7.410120 AACTTTGATGGGACTGGAATTATTC 57.590 36.000 0.00 0.00 0.00 1.75
2817 3057 5.748402 TGTGATCATGCAAAGAGTTATCCT 58.252 37.500 0.00 0.00 0.00 3.24
2869 3142 4.010349 AGCTTGTAATGTTTGCCTCCTAC 58.990 43.478 0.00 0.00 0.00 3.18
2888 3161 5.536538 TCCTACGATGCTATCTTGACATCTT 59.463 40.000 0.00 0.00 38.42 2.40
2909 3188 9.069078 CATCTTGTATTAGAAAAATGTGCACTG 57.931 33.333 19.41 0.00 0.00 3.66
2976 3255 2.306847 TCTAGCTGTGTCAGTGTGTCA 58.693 47.619 0.00 0.00 33.43 3.58
3221 3503 5.491982 TGGTTATTTTTGTTGCCAAACAGT 58.508 33.333 0.00 0.00 46.66 3.55
3232 3514 4.425180 TGCCAAACAGTTTAGGTGACTA 57.575 40.909 0.00 0.00 43.67 2.59
3234 3516 6.732147 GTTGCCAAACAGTTTAGGTGACTAAG 60.732 42.308 0.00 0.00 43.52 2.18
3249 3531 8.890124 AGGTGACTAAGTTTTACTCTTCTTTC 57.110 34.615 0.00 0.00 40.61 2.62
3514 3916 5.808540 TCCACGTATCGAAAACTAAAGGATG 59.191 40.000 0.00 0.00 0.00 3.51
3518 3920 5.062934 CGTATCGAAAACTAAAGGATGTGCA 59.937 40.000 0.00 0.00 0.00 4.57
3674 4076 5.801380 TGCATCTGATATGTGACTATGCAT 58.199 37.500 3.79 3.79 42.22 3.96
3898 4305 8.051468 TCCATAATTCAATGTTACTATGGGGA 57.949 34.615 5.55 0.00 37.46 4.81
3899 4306 8.163408 TCCATAATTCAATGTTACTATGGGGAG 58.837 37.037 5.55 0.00 37.46 4.30
3901 4308 8.786898 CATAATTCAATGTTACTATGGGGAGTG 58.213 37.037 0.00 0.00 0.00 3.51
3902 4309 4.150897 TCAATGTTACTATGGGGAGTGC 57.849 45.455 0.00 0.00 0.00 4.40
3903 4310 3.780294 TCAATGTTACTATGGGGAGTGCT 59.220 43.478 0.00 0.00 0.00 4.40
3905 4312 2.827755 TGTTACTATGGGGAGTGCTGA 58.172 47.619 0.00 0.00 0.00 4.26
3906 4313 3.384168 TGTTACTATGGGGAGTGCTGAT 58.616 45.455 0.00 0.00 0.00 2.90
3951 4369 5.886960 ACATCTGTTCTGTCCATTTAAGC 57.113 39.130 0.00 0.00 0.00 3.09
3952 4370 5.316167 ACATCTGTTCTGTCCATTTAAGCA 58.684 37.500 0.00 0.00 0.00 3.91
3953 4371 5.769662 ACATCTGTTCTGTCCATTTAAGCAA 59.230 36.000 0.00 0.00 0.00 3.91
3954 4372 6.435277 ACATCTGTTCTGTCCATTTAAGCAAT 59.565 34.615 0.00 0.00 0.00 3.56
3955 4373 6.258230 TCTGTTCTGTCCATTTAAGCAATG 57.742 37.500 0.00 0.00 41.99 2.82
3956 4374 4.808558 TGTTCTGTCCATTTAAGCAATGC 58.191 39.130 0.00 0.00 41.10 3.56
3957 4375 3.763097 TCTGTCCATTTAAGCAATGCG 57.237 42.857 0.00 0.00 41.10 4.73
3958 4376 2.159393 TCTGTCCATTTAAGCAATGCGC 60.159 45.455 0.00 0.00 41.10 6.09
3979 4409 3.372822 GCCAATGCCTGATGACATTTTTG 59.627 43.478 0.00 0.00 34.32 2.44
4004 4434 8.584157 TGAAGTTAATGAATGCCTTTTGTATGT 58.416 29.630 0.00 0.00 0.00 2.29
4640 8373 9.541143 TCTATCCAACCATTTTGAAAGAAAAAC 57.459 29.630 0.00 0.00 32.12 2.43
4641 8374 6.654793 TCCAACCATTTTGAAAGAAAAACG 57.345 33.333 0.00 0.00 32.12 3.60
4662 8395 3.639538 GATGATGATTCATGCCTTGCAC 58.360 45.455 3.32 0.00 42.73 4.57
4745 8479 6.851609 TGCTTAACAGATGCGATAATTTGTT 58.148 32.000 0.00 0.00 38.18 2.83
4746 8480 7.312154 TGCTTAACAGATGCGATAATTTGTTT 58.688 30.769 7.18 0.00 36.55 2.83
5088 8822 9.872757 TTAGCTATGTTTAAGTTTCTTTGTTCG 57.127 29.630 0.00 0.00 0.00 3.95
5148 8882 3.536956 ATTTTTCAGGCATGGCATCAG 57.463 42.857 22.64 8.27 0.00 2.90
5189 9001 4.147321 AGTTGTGCATCCTTGTTGATCTT 58.853 39.130 0.00 0.00 0.00 2.40
5190 9002 4.586001 AGTTGTGCATCCTTGTTGATCTTT 59.414 37.500 0.00 0.00 0.00 2.52
5239 9051 1.607178 CCAGCATGTCCAAAGGCCA 60.607 57.895 5.01 0.00 0.00 5.36
5311 9123 4.449131 CAGATGTCTGCAAGGTATGTCAT 58.551 43.478 0.00 0.00 37.15 3.06
5472 9284 0.379669 CTTTGGCGCAGATGGCTTAG 59.620 55.000 10.83 0.00 41.67 2.18
5540 9352 2.634453 TCTGTCTGATGCTTCCAGTTCA 59.366 45.455 0.00 0.00 33.57 3.18
5630 9442 3.682858 CACAACCAAGTCCAATACCTACG 59.317 47.826 0.00 0.00 0.00 3.51
5827 9643 4.267928 CGAAAGGGAGCGTTAGATAAACAG 59.732 45.833 0.00 0.00 38.03 3.16
5941 9757 9.841295 TTAAATACTAGAAACAGCGGGATATTT 57.159 29.630 0.00 0.00 0.00 1.40
5955 9772 1.756538 GATATTTGCCCCACCTGTTGG 59.243 52.381 0.00 0.00 46.47 3.77
6053 9870 1.398390 GCCTCTTGCTACATGAAACCG 59.602 52.381 0.00 0.00 36.87 4.44
6103 9920 6.371809 TTCAGCTGACGTTTTCTTACATTT 57.628 33.333 18.03 0.00 0.00 2.32
6286 10262 1.514228 CTGCTTTGCTGATGCTGCG 60.514 57.895 0.00 0.00 40.48 5.18
6345 10322 7.775397 TGTGTAACACTTCAACTTTAGGTAC 57.225 36.000 0.00 0.00 45.67 3.34
6346 10323 7.558604 TGTGTAACACTTCAACTTTAGGTACT 58.441 34.615 0.00 0.00 45.67 2.73
6347 10324 7.707893 TGTGTAACACTTCAACTTTAGGTACTC 59.292 37.037 0.00 0.00 45.67 2.59
6348 10325 7.170489 GTGTAACACTTCAACTTTAGGTACTCC 59.830 40.741 0.00 0.00 36.81 3.85
6349 10326 5.224821 ACACTTCAACTTTAGGTACTCCC 57.775 43.478 0.00 0.00 41.75 4.30
6351 10328 5.011840 ACACTTCAACTTTAGGTACTCCCTC 59.988 44.000 0.00 0.00 44.81 4.30
6352 10329 4.531339 ACTTCAACTTTAGGTACTCCCTCC 59.469 45.833 0.00 0.00 44.81 4.30
6353 10330 3.094572 TCAACTTTAGGTACTCCCTCCG 58.905 50.000 0.00 0.00 44.81 4.63
6354 10331 2.830321 CAACTTTAGGTACTCCCTCCGT 59.170 50.000 0.00 0.00 44.81 4.69
6355 10332 3.181393 ACTTTAGGTACTCCCTCCGTT 57.819 47.619 0.00 0.00 44.81 4.44
6356 10333 3.095332 ACTTTAGGTACTCCCTCCGTTC 58.905 50.000 0.00 0.00 44.81 3.95
6357 10334 2.149973 TTAGGTACTCCCTCCGTTCC 57.850 55.000 0.00 0.00 44.81 3.62
6358 10335 1.302907 TAGGTACTCCCTCCGTTCCT 58.697 55.000 0.00 0.00 44.81 3.36
6359 10336 1.302907 AGGTACTCCCTCCGTTCCTA 58.697 55.000 0.00 0.00 40.71 2.94
6360 10337 1.642762 AGGTACTCCCTCCGTTCCTAA 59.357 52.381 0.00 0.00 40.71 2.69
6361 10338 2.043526 AGGTACTCCCTCCGTTCCTAAA 59.956 50.000 0.00 0.00 40.71 1.85
6362 10339 3.036819 GGTACTCCCTCCGTTCCTAAAT 58.963 50.000 0.00 0.00 0.00 1.40
6363 10340 4.078980 AGGTACTCCCTCCGTTCCTAAATA 60.079 45.833 0.00 0.00 40.71 1.40
6364 10341 4.837298 GGTACTCCCTCCGTTCCTAAATAT 59.163 45.833 0.00 0.00 0.00 1.28
6365 10342 6.012745 GGTACTCCCTCCGTTCCTAAATATA 58.987 44.000 0.00 0.00 0.00 0.86
6366 10343 6.494835 GGTACTCCCTCCGTTCCTAAATATAA 59.505 42.308 0.00 0.00 0.00 0.98
6367 10344 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
6368 10345 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
6369 10346 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
6370 10347 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
6371 10348 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
6372 10349 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
6373 10350 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
6374 10351 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
6400 10377 8.780846 AGAGATTCTACTATGGACTACATACG 57.219 38.462 0.00 0.00 41.03 3.06
6401 10378 7.825270 AGAGATTCTACTATGGACTACATACGG 59.175 40.741 0.00 0.00 41.03 4.02
6402 10379 7.687388 AGATTCTACTATGGACTACATACGGA 58.313 38.462 0.00 0.00 41.03 4.69
6403 10380 7.825270 AGATTCTACTATGGACTACATACGGAG 59.175 40.741 0.00 0.00 41.03 4.63
6404 10381 5.243981 TCTACTATGGACTACATACGGAGC 58.756 45.833 0.00 0.00 41.03 4.70
6405 10382 3.828921 ACTATGGACTACATACGGAGCA 58.171 45.455 0.00 0.00 41.03 4.26
6406 10383 4.212716 ACTATGGACTACATACGGAGCAA 58.787 43.478 0.00 0.00 41.03 3.91
6407 10384 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
6408 10385 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
6409 10386 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
6410 10387 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
6411 10388 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
6412 10389 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
6413 10390 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
6414 10391 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
6415 10392 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
6416 10393 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
6417 10394 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
6418 10395 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
6419 10396 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
6420 10397 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
6421 10398 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
6422 10399 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
6423 10400 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
6438 10415 9.817809 GTGAATCTACACTCTAAAATATGTCCA 57.182 33.333 0.00 0.00 37.73 4.02
6465 10442 5.657474 ACATCCGTATGTAGTTTGTAGTGG 58.343 41.667 0.00 0.00 44.66 4.00
6466 10443 5.419788 ACATCCGTATGTAGTTTGTAGTGGA 59.580 40.000 0.00 0.00 44.66 4.02
6467 10444 5.981088 TCCGTATGTAGTTTGTAGTGGAA 57.019 39.130 0.00 0.00 0.00 3.53
6468 10445 6.534475 TCCGTATGTAGTTTGTAGTGGAAT 57.466 37.500 0.00 0.00 0.00 3.01
6469 10446 6.567050 TCCGTATGTAGTTTGTAGTGGAATC 58.433 40.000 0.00 0.00 0.00 2.52
6470 10447 6.379133 TCCGTATGTAGTTTGTAGTGGAATCT 59.621 38.462 0.00 0.00 0.00 2.40
6471 10448 6.696148 CCGTATGTAGTTTGTAGTGGAATCTC 59.304 42.308 0.00 0.00 0.00 2.75
6472 10449 7.416438 CCGTATGTAGTTTGTAGTGGAATCTCT 60.416 40.741 0.00 0.00 0.00 3.10
6473 10450 7.974501 CGTATGTAGTTTGTAGTGGAATCTCTT 59.025 37.037 0.00 0.00 0.00 2.85
6477 10454 9.706691 TGTAGTTTGTAGTGGAATCTCTTAAAG 57.293 33.333 0.00 0.00 0.00 1.85
6478 10455 9.924650 GTAGTTTGTAGTGGAATCTCTTAAAGA 57.075 33.333 0.00 0.00 38.72 2.52
6479 10456 8.834749 AGTTTGTAGTGGAATCTCTTAAAGAC 57.165 34.615 0.00 0.00 36.65 3.01
6480 10457 8.652290 AGTTTGTAGTGGAATCTCTTAAAGACT 58.348 33.333 0.00 0.00 36.65 3.24
6481 10458 9.274206 GTTTGTAGTGGAATCTCTTAAAGACTT 57.726 33.333 0.00 0.00 36.65 3.01
6494 10471 7.808279 TCTTAAAGACTTAAGAATGGAGGGA 57.192 36.000 10.09 0.00 46.47 4.20
6664 10651 8.712285 TTCAAAGGATATTCAGGTTAGTTACG 57.288 34.615 0.00 0.00 0.00 3.18
6685 10680 9.681692 GTTACGTGTATATGACCAACATGTATA 57.318 33.333 0.00 0.00 42.25 1.47
6931 10929 9.585099 TCCACAATTTGATCTGTTATTATTTGC 57.415 29.630 2.79 0.00 0.00 3.68
7110 11109 3.367395 GCCAGGTTCTGAATTTACTTGCC 60.367 47.826 0.00 0.00 32.44 4.52
7136 11135 2.104281 AGAGTTTACCCAAGAAGCACGT 59.896 45.455 0.00 0.00 0.00 4.49
7137 11136 3.322828 AGAGTTTACCCAAGAAGCACGTA 59.677 43.478 0.00 0.00 0.00 3.57
7139 11138 4.648651 AGTTTACCCAAGAAGCACGTATT 58.351 39.130 0.00 0.00 0.00 1.89
7140 11139 5.797051 AGTTTACCCAAGAAGCACGTATTA 58.203 37.500 0.00 0.00 0.00 0.98
7141 11140 5.640783 AGTTTACCCAAGAAGCACGTATTAC 59.359 40.000 0.00 0.00 0.00 1.89
7181 11182 1.067295 TCCTTCATCCCTGCAAGTGT 58.933 50.000 0.00 0.00 0.00 3.55
7186 11187 4.818546 CCTTCATCCCTGCAAGTGTATTAG 59.181 45.833 0.00 0.00 0.00 1.73
7188 11189 2.309528 TCCCTGCAAGTGTATTAGCG 57.690 50.000 0.00 0.00 0.00 4.26
7195 11196 6.259167 CCCTGCAAGTGTATTAGCGTATTTTA 59.741 38.462 0.00 0.00 0.00 1.52
7196 11197 7.041372 CCCTGCAAGTGTATTAGCGTATTTTAT 60.041 37.037 0.00 0.00 0.00 1.40
7197 11198 8.009974 CCTGCAAGTGTATTAGCGTATTTTATC 58.990 37.037 0.00 0.00 0.00 1.75
7198 11199 8.657074 TGCAAGTGTATTAGCGTATTTTATCT 57.343 30.769 0.00 0.00 0.00 1.98
7199 11200 9.104965 TGCAAGTGTATTAGCGTATTTTATCTT 57.895 29.630 0.00 0.00 0.00 2.40
7210 11211 8.732746 AGCGTATTTTATCTTTCATACTGGTT 57.267 30.769 0.00 0.00 0.00 3.67
7211 11212 8.612619 AGCGTATTTTATCTTTCATACTGGTTG 58.387 33.333 0.00 0.00 0.00 3.77
7212 11213 7.855904 GCGTATTTTATCTTTCATACTGGTTGG 59.144 37.037 0.00 0.00 0.00 3.77
7213 11214 8.889717 CGTATTTTATCTTTCATACTGGTTGGT 58.110 33.333 0.00 0.00 0.00 3.67
7216 11217 8.698973 TTTTATCTTTCATACTGGTTGGTTCA 57.301 30.769 0.00 0.00 0.00 3.18
7217 11218 8.877864 TTTATCTTTCATACTGGTTGGTTCAT 57.122 30.769 0.00 0.00 0.00 2.57
7229 11230 4.240096 GGTTGGTTCATGAGCATTTCAAG 58.760 43.478 11.93 0.00 39.77 3.02
7230 11231 4.262164 GGTTGGTTCATGAGCATTTCAAGT 60.262 41.667 11.93 0.00 39.77 3.16
7231 11232 5.291971 GTTGGTTCATGAGCATTTCAAGTT 58.708 37.500 11.93 0.00 39.77 2.66
7232 11233 6.446318 GTTGGTTCATGAGCATTTCAAGTTA 58.554 36.000 11.93 0.00 39.77 2.24
7235 11236 6.072508 TGGTTCATGAGCATTTCAAGTTAGTC 60.073 38.462 11.93 0.00 39.77 2.59
7236 11237 6.317857 GTTCATGAGCATTTCAAGTTAGTCC 58.682 40.000 4.47 0.00 39.77 3.85
7237 11238 5.559770 TCATGAGCATTTCAAGTTAGTCCA 58.440 37.500 0.00 0.00 39.77 4.02
7238 11239 6.003326 TCATGAGCATTTCAAGTTAGTCCAA 58.997 36.000 0.00 0.00 39.77 3.53
7239 11240 5.947228 TGAGCATTTCAAGTTAGTCCAAG 57.053 39.130 0.00 0.00 31.34 3.61
7413 11437 9.436957 TTTGTTGAGACTAGAACCTCATAAATC 57.563 33.333 12.44 5.48 38.97 2.17
7434 11982 0.607217 TGCAATGCCACACAGAGAGG 60.607 55.000 1.53 0.00 0.00 3.69
7522 12070 1.421382 CCAGCCAATCGTTTTGCAAG 58.579 50.000 0.00 0.00 0.00 4.01
7561 12109 1.534595 CTTGAAGCTTCAGCCACACTC 59.465 52.381 27.02 0.00 43.38 3.51
7567 12115 1.542108 GCTTCAGCCACACTCACTCTT 60.542 52.381 0.00 0.00 34.31 2.85
7588 12136 1.738700 GCTGAACTGTGGCTAGCTCTC 60.739 57.143 15.72 6.51 0.00 3.20
7645 12193 7.807977 TGTTTATCAAAGCCTTCCTATGATC 57.192 36.000 0.00 0.00 33.17 2.92
7711 12259 7.801716 AGTCTTAGCAAAATGTCACTTAACA 57.198 32.000 0.00 0.00 0.00 2.41
7731 12279 9.401058 CTTAACAGATCCAGAATTTTCAGGTAT 57.599 33.333 2.19 0.00 35.55 2.73
7732 12280 7.636150 AACAGATCCAGAATTTTCAGGTATG 57.364 36.000 2.19 3.13 35.55 2.39
7733 12281 5.591877 ACAGATCCAGAATTTTCAGGTATGC 59.408 40.000 2.19 0.00 35.55 3.14
7734 12282 4.818546 AGATCCAGAATTTTCAGGTATGCG 59.181 41.667 2.19 0.00 35.55 4.73
7794 12342 4.022589 ACTTCACATTCAGTTGCTTGATGG 60.023 41.667 0.00 0.00 0.00 3.51
7795 12343 3.753815 TCACATTCAGTTGCTTGATGGA 58.246 40.909 0.00 0.00 0.00 3.41
7796 12344 3.503363 TCACATTCAGTTGCTTGATGGAC 59.497 43.478 0.00 0.00 0.00 4.02
7797 12345 2.821969 ACATTCAGTTGCTTGATGGACC 59.178 45.455 0.00 0.00 0.00 4.46
7818 12366 7.448161 TGGACCGACCTCTCGTTATTTATTATA 59.552 37.037 0.00 0.00 38.32 0.98
7974 12529 5.638783 GAGTTCAAAATGCATGAAGAGGAG 58.361 41.667 0.00 0.00 37.46 3.69
8104 12659 3.394836 GAGGGAGGAAGCTGCGGT 61.395 66.667 0.00 0.00 0.00 5.68
8173 12728 3.935828 GAGGATTCACTTGCTTACTGACC 59.064 47.826 0.00 0.00 0.00 4.02
8186 12741 4.274950 GCTTACTGACCTTGCACAGTTAAA 59.725 41.667 12.34 2.48 43.52 1.52
8191 12746 3.568007 TGACCTTGCACAGTTAAATCACC 59.432 43.478 0.00 0.00 0.00 4.02
8200 12755 7.112122 TGCACAGTTAAATCACCAGATTCTAT 58.888 34.615 0.00 0.00 43.52 1.98
8220 15604 2.215907 AATTGCCTGATCTCGAGACG 57.784 50.000 19.30 9.18 0.00 4.18
8246 15630 4.569943 TCCATGACTAACTCTGCAAAGTC 58.430 43.478 0.00 0.00 39.04 3.01
8275 15659 1.674651 TGAGCGAGCGAGTACCACT 60.675 57.895 0.00 0.00 0.00 4.00
8338 15724 3.005791 GGAAGAAAAATGGGTGGTGTCAG 59.994 47.826 0.00 0.00 0.00 3.51
8340 15726 2.958355 AGAAAAATGGGTGGTGTCAGTG 59.042 45.455 0.00 0.00 0.00 3.66
8342 15728 0.827507 AAATGGGTGGTGTCAGTGGC 60.828 55.000 0.00 0.00 0.00 5.01
8364 16088 0.672342 GTCATGGCCTGATGCATTCC 59.328 55.000 3.32 0.89 43.89 3.01
8409 16133 6.766944 TGAAATCAATTGAATTTTGCACCTGT 59.233 30.769 13.09 0.00 0.00 4.00
8427 16151 4.158025 ACCTGTATCGTCTCAACTTTCGAT 59.842 41.667 0.00 0.00 43.66 3.59
8433 16157 4.227538 TCGTCTCAACTTTCGATCAGTTC 58.772 43.478 7.40 0.00 31.83 3.01
8445 16169 2.926200 CGATCAGTTCGCATCAAGAGTT 59.074 45.455 0.00 0.00 41.69 3.01
8459 16183 9.196552 CGCATCAAGAGTTAATGTATATCAAGA 57.803 33.333 0.00 0.00 0.00 3.02
8508 16283 3.530265 TCTTGTACCGTGTTTGTCTGT 57.470 42.857 0.00 0.00 0.00 3.41
8534 16311 7.226441 TGATAACAACATATATGCTTCAGCCT 58.774 34.615 12.79 0.00 41.18 4.58
8559 16354 1.470098 GCTCGTTCACTTGCAATGGAT 59.530 47.619 0.00 0.00 0.00 3.41
8561 16356 2.485426 CTCGTTCACTTGCAATGGATGT 59.515 45.455 0.00 0.00 0.00 3.06
8571 16366 4.707030 TGCAATGGATGTTTCAGATGAC 57.293 40.909 0.00 0.00 0.00 3.06
8572 16367 4.080687 TGCAATGGATGTTTCAGATGACA 58.919 39.130 0.00 0.00 0.00 3.58
8576 16371 7.720515 TGCAATGGATGTTTCAGATGACATATA 59.279 33.333 0.00 0.00 36.67 0.86
8577 16372 8.737175 GCAATGGATGTTTCAGATGACATATAT 58.263 33.333 0.00 0.00 36.67 0.86
8580 16375 7.670364 TGGATGTTTCAGATGACATATATCGT 58.330 34.615 0.00 0.00 36.67 3.73
8581 16376 7.599998 TGGATGTTTCAGATGACATATATCGTG 59.400 37.037 0.00 0.00 36.67 4.35
8582 16377 7.063898 GGATGTTTCAGATGACATATATCGTGG 59.936 40.741 0.00 0.00 36.67 4.94
8583 16378 5.696270 TGTTTCAGATGACATATATCGTGGC 59.304 40.000 0.00 0.00 0.00 5.01
8584 16379 5.467035 TTCAGATGACATATATCGTGGCA 57.533 39.130 0.00 0.00 39.30 4.92
8585 16380 5.467035 TCAGATGACATATATCGTGGCAA 57.533 39.130 1.10 0.00 38.28 4.52
8586 16381 5.852827 TCAGATGACATATATCGTGGCAAA 58.147 37.500 1.10 0.00 38.28 3.68
8587 16382 5.696270 TCAGATGACATATATCGTGGCAAAC 59.304 40.000 1.10 0.34 38.28 2.93
8588 16383 5.466393 CAGATGACATATATCGTGGCAAACA 59.534 40.000 1.10 0.00 38.28 2.83
8589 16384 6.148315 CAGATGACATATATCGTGGCAAACAT 59.852 38.462 1.10 0.00 38.28 2.71
8590 16385 6.712095 AGATGACATATATCGTGGCAAACATT 59.288 34.615 1.10 0.00 38.28 2.71
8591 16386 7.877612 AGATGACATATATCGTGGCAAACATTA 59.122 33.333 1.10 0.00 38.28 1.90
8666 16474 3.002791 ACGACATGAAAGGCACATACAG 58.997 45.455 0.00 0.00 0.00 2.74
8779 16588 2.865119 TATATCCTGGCTGCCACATG 57.135 50.000 19.30 8.47 0.00 3.21
8806 16618 4.962362 TGGATGACTGCTCTCTGGTTATTA 59.038 41.667 0.00 0.00 0.00 0.98
8807 16619 5.604231 TGGATGACTGCTCTCTGGTTATTAT 59.396 40.000 0.00 0.00 0.00 1.28
8809 16621 6.648725 GGATGACTGCTCTCTGGTTATTATTC 59.351 42.308 0.00 0.00 0.00 1.75
8810 16622 6.544928 TGACTGCTCTCTGGTTATTATTCA 57.455 37.500 0.00 0.00 0.00 2.57
8812 16624 6.988580 TGACTGCTCTCTGGTTATTATTCATG 59.011 38.462 0.00 0.00 0.00 3.07
8813 16625 6.294473 ACTGCTCTCTGGTTATTATTCATGG 58.706 40.000 0.00 0.00 0.00 3.66
8814 16626 6.126652 ACTGCTCTCTGGTTATTATTCATGGT 60.127 38.462 0.00 0.00 0.00 3.55
8816 16628 5.703130 GCTCTCTGGTTATTATTCATGGTCC 59.297 44.000 0.00 0.00 0.00 4.46
8818 16630 7.392766 TCTCTGGTTATTATTCATGGTCCAT 57.607 36.000 0.00 0.00 0.00 3.41
8819 16631 7.815383 TCTCTGGTTATTATTCATGGTCCATT 58.185 34.615 0.00 0.00 0.00 3.16
8820 16632 7.939039 TCTCTGGTTATTATTCATGGTCCATTC 59.061 37.037 0.00 0.00 0.00 2.67
8821 16633 7.004086 TCTGGTTATTATTCATGGTCCATTCC 58.996 38.462 0.00 0.00 0.00 3.01
8822 16634 5.767665 TGGTTATTATTCATGGTCCATTCCG 59.232 40.000 0.00 0.00 0.00 4.30
8824 16636 3.576078 TTATTCATGGTCCATTCCGCT 57.424 42.857 0.00 0.00 0.00 5.52
8825 16637 2.442236 ATTCATGGTCCATTCCGCTT 57.558 45.000 0.00 0.00 0.00 4.68
8827 16639 0.617935 TCATGGTCCATTCCGCTTCA 59.382 50.000 0.00 0.00 0.00 3.02
8843 16667 3.609409 CGCTTCAACCCTTTTGTAAGAGC 60.609 47.826 0.00 0.00 32.92 4.09
8849 16673 1.544759 CCCTTTTGTAAGAGCGGGTGT 60.545 52.381 0.00 0.00 32.92 4.16
8880 16705 2.383527 GCAAGGCTGTCGAACTCCG 61.384 63.158 0.00 0.00 40.25 4.63
8881 16706 1.289066 CAAGGCTGTCGAACTCCGA 59.711 57.895 0.00 0.00 46.35 4.55
8913 16738 2.549992 GGAAATGGCAACCAGGGAAAAC 60.550 50.000 0.00 0.00 36.75 2.43
8914 16739 1.055849 AATGGCAACCAGGGAAAACC 58.944 50.000 0.00 0.00 36.75 3.27
8938 16763 3.235200 AGGAGAATGCCGTAATAGCTCT 58.765 45.455 0.00 0.00 0.00 4.09
8999 16863 1.089920 AGCATCATTGGCGACAGTTC 58.910 50.000 0.00 0.00 44.54 3.01
9011 16875 1.563111 GACAGTTCGAACCAACACGA 58.437 50.000 24.22 0.00 36.75 4.35
9014 16878 0.176219 AGTTCGAACCAACACGACCA 59.824 50.000 24.22 0.00 38.24 4.02
9047 16911 5.685728 AGCAATTTATACAGTCTTCCCTCC 58.314 41.667 0.00 0.00 0.00 4.30
9085 16950 3.063510 CTGCCAAGGAGAAGATTCACA 57.936 47.619 0.00 0.00 0.00 3.58
9118 16983 5.728637 CCTGAAAAAGGGCAGTAGAAATT 57.271 39.130 0.00 0.00 43.15 1.82
9129 16994 5.356190 GGGCAGTAGAAATTTGGGTTACTAC 59.644 44.000 0.00 0.00 0.00 2.73
9139 17004 7.991084 AATTTGGGTTACTACTTTACTGGAC 57.009 36.000 0.00 0.00 0.00 4.02
9143 17008 5.366186 TGGGTTACTACTTTACTGGACACAA 59.634 40.000 0.00 0.00 0.00 3.33
9144 17009 5.698089 GGGTTACTACTTTACTGGACACAAC 59.302 44.000 0.00 0.00 0.00 3.32
9145 17010 6.282930 GGTTACTACTTTACTGGACACAACA 58.717 40.000 0.00 0.00 0.00 3.33
9146 17011 6.423001 GGTTACTACTTTACTGGACACAACAG 59.577 42.308 0.00 0.00 41.64 3.16
9147 17012 4.377897 ACTACTTTACTGGACACAACAGC 58.622 43.478 0.00 0.00 39.55 4.40
9148 17013 3.275617 ACTTTACTGGACACAACAGCA 57.724 42.857 0.00 0.00 39.55 4.41
9149 17014 3.206150 ACTTTACTGGACACAACAGCAG 58.794 45.455 0.00 0.00 39.55 4.24
9150 17015 1.593196 TTACTGGACACAACAGCAGC 58.407 50.000 0.00 0.00 39.55 5.25
9152 17017 0.394216 ACTGGACACAACAGCAGCAA 60.394 50.000 0.00 0.00 39.55 3.91
9155 17020 1.024271 GGACACAACAGCAGCAAAGA 58.976 50.000 0.00 0.00 0.00 2.52
9156 17021 1.268743 GGACACAACAGCAGCAAAGAC 60.269 52.381 0.00 0.00 0.00 3.01
9157 17022 1.401552 GACACAACAGCAGCAAAGACA 59.598 47.619 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 6.528423 TGTTCACGGTTTCAAAATTTGTACAG 59.472 34.615 5.56 8.47 0.00 2.74
309 340 6.015856 TGTTCACAAACTCAAAGGAAGTTCAA 60.016 34.615 5.01 0.00 36.30 2.69
420 452 6.159299 TCAAAGGATGTGCAGAATTTCAAA 57.841 33.333 0.00 0.00 0.00 2.69
421 453 5.787953 TCAAAGGATGTGCAGAATTTCAA 57.212 34.783 0.00 0.00 0.00 2.69
422 454 5.787953 TTCAAAGGATGTGCAGAATTTCA 57.212 34.783 0.00 0.00 0.00 2.69
648 689 9.825109 CCCTGGTTTTTCTTTTACTTTTTGATA 57.175 29.630 0.00 0.00 0.00 2.15
658 750 5.991861 GGTTTTCCCCTGGTTTTTCTTTTA 58.008 37.500 0.00 0.00 0.00 1.52
686 790 5.104900 TGGGAAGCTTCTAGAATGTTCCTAC 60.105 44.000 28.49 20.03 34.72 3.18
704 808 0.109723 TCGGGACTGGTTTTGGGAAG 59.890 55.000 0.00 0.00 0.00 3.46
756 860 3.134127 GGCCCATCTGTGCGTTCC 61.134 66.667 0.00 0.00 0.00 3.62
794 898 1.443872 GTCGACCTACCGCACACAG 60.444 63.158 3.51 0.00 0.00 3.66
859 982 3.635869 TTTCCCCTCTCCCTCCCGG 62.636 68.421 0.00 0.00 0.00 5.73
860 983 2.040606 TTTCCCCTCTCCCTCCCG 59.959 66.667 0.00 0.00 0.00 5.14
861 984 0.550393 AACTTTCCCCTCTCCCTCCC 60.550 60.000 0.00 0.00 0.00 4.30
862 985 0.621082 CAACTTTCCCCTCTCCCTCC 59.379 60.000 0.00 0.00 0.00 4.30
863 986 0.034960 GCAACTTTCCCCTCTCCCTC 60.035 60.000 0.00 0.00 0.00 4.30
864 987 1.501654 GGCAACTTTCCCCTCTCCCT 61.502 60.000 0.00 0.00 0.00 4.20
865 988 1.000771 GGCAACTTTCCCCTCTCCC 60.001 63.158 0.00 0.00 0.00 4.30
866 989 4.745116 GGCAACTTTCCCCTCTCC 57.255 61.111 0.00 0.00 0.00 3.71
878 1001 1.856265 CTCGTGGGCTCAAAGGCAAC 61.856 60.000 0.00 0.42 43.44 4.17
879 1002 1.600636 CTCGTGGGCTCAAAGGCAA 60.601 57.895 0.00 0.00 43.44 4.52
880 1003 2.032528 CTCGTGGGCTCAAAGGCA 59.967 61.111 0.00 0.00 43.44 4.75
881 1004 2.032681 ACTCGTGGGCTCAAAGGC 59.967 61.111 0.00 0.00 40.51 4.35
882 1005 2.328099 GCACTCGTGGGCTCAAAGG 61.328 63.158 4.07 0.00 0.00 3.11
883 1006 2.671177 CGCACTCGTGGGCTCAAAG 61.671 63.158 10.36 0.00 36.73 2.77
884 1007 2.664851 CGCACTCGTGGGCTCAAA 60.665 61.111 10.36 0.00 36.73 2.69
885 1008 3.573772 CTCGCACTCGTGGGCTCAA 62.574 63.158 10.36 0.00 42.44 3.02
886 1009 4.056125 CTCGCACTCGTGGGCTCA 62.056 66.667 10.36 0.00 42.44 4.26
891 1014 3.573772 TTCAGGCTCGCACTCGTGG 62.574 63.158 0.00 0.00 36.96 4.94
892 1015 1.621301 CTTTCAGGCTCGCACTCGTG 61.621 60.000 0.00 0.00 36.96 4.35
893 1016 1.373497 CTTTCAGGCTCGCACTCGT 60.373 57.895 0.00 0.00 36.96 4.18
894 1017 2.734673 GCTTTCAGGCTCGCACTCG 61.735 63.158 0.00 0.00 0.00 4.18
895 1018 2.394563 GGCTTTCAGGCTCGCACTC 61.395 63.158 0.00 0.00 37.85 3.51
896 1019 2.359230 GGCTTTCAGGCTCGCACT 60.359 61.111 0.00 0.00 37.85 4.40
897 1020 3.435186 GGGCTTTCAGGCTCGCAC 61.435 66.667 0.00 0.00 41.09 5.34
901 1024 2.402572 GCTTCGGGCTTTCAGGCTC 61.403 63.158 0.00 0.00 41.09 4.70
902 1025 2.360475 GCTTCGGGCTTTCAGGCT 60.360 61.111 0.00 0.00 41.09 4.58
903 1026 3.443925 GGCTTCGGGCTTTCAGGC 61.444 66.667 1.83 0.00 41.46 4.85
904 1027 2.034066 TGGCTTCGGGCTTTCAGG 59.966 61.111 1.83 0.00 41.46 3.86
905 1028 1.600636 TGTGGCTTCGGGCTTTCAG 60.601 57.895 1.83 0.00 41.46 3.02
906 1029 1.896660 GTGTGGCTTCGGGCTTTCA 60.897 57.895 1.83 0.00 41.46 2.69
907 1030 1.578206 GAGTGTGGCTTCGGGCTTTC 61.578 60.000 1.83 0.00 41.46 2.62
908 1031 1.600916 GAGTGTGGCTTCGGGCTTT 60.601 57.895 1.83 0.00 41.46 3.51
909 1032 2.032681 GAGTGTGGCTTCGGGCTT 59.967 61.111 1.83 0.00 41.46 4.35
910 1033 4.379243 CGAGTGTGGCTTCGGGCT 62.379 66.667 1.83 0.00 41.46 5.19
912 1035 4.379243 AGCGAGTGTGGCTTCGGG 62.379 66.667 0.00 0.00 37.50 5.14
913 1036 2.811317 GAGCGAGTGTGGCTTCGG 60.811 66.667 0.00 0.00 41.72 4.30
914 1037 2.811317 GGAGCGAGTGTGGCTTCG 60.811 66.667 0.00 0.00 41.72 3.79
915 1038 2.435059 GGGAGCGAGTGTGGCTTC 60.435 66.667 0.00 0.00 41.72 3.86
916 1039 4.021925 GGGGAGCGAGTGTGGCTT 62.022 66.667 0.00 0.00 41.72 4.35
918 1041 4.459089 GAGGGGAGCGAGTGTGGC 62.459 72.222 0.00 0.00 0.00 5.01
919 1042 3.775654 GGAGGGGAGCGAGTGTGG 61.776 72.222 0.00 0.00 0.00 4.17
920 1043 3.775654 GGGAGGGGAGCGAGTGTG 61.776 72.222 0.00 0.00 0.00 3.82
995 1118 2.202171 CGAACACGTTCATGGCGC 60.202 61.111 10.35 0.00 39.46 6.53
996 1119 2.202171 GCGAACACGTTCATGGCG 60.202 61.111 10.35 8.61 39.46 5.69
997 1120 2.202171 CGCGAACACGTTCATGGC 60.202 61.111 0.00 4.80 39.46 4.40
1284 1424 4.314440 TGGGAGCACACGGACAGC 62.314 66.667 0.00 0.00 0.00 4.40
1285 1425 2.357517 GTGGGAGCACACGGACAG 60.358 66.667 0.00 0.00 0.00 3.51
1310 1454 2.286365 AAAGCCAATCTCCACCGAAA 57.714 45.000 0.00 0.00 0.00 3.46
1324 1489 4.307443 GCTTGGTGATAATGGTAAAGCC 57.693 45.455 0.00 0.00 34.01 4.35
1339 1504 0.040942 TGTATGCAATGGGGCTTGGT 59.959 50.000 0.00 0.00 34.04 3.67
1341 1506 1.477553 AGTGTATGCAATGGGGCTTG 58.522 50.000 0.00 0.00 34.04 4.01
1364 1529 7.822575 GCATTTTGATGCTAATTACGAGTAC 57.177 36.000 4.23 0.00 43.79 2.73
1471 1679 6.453396 GCAGTTACCGAGAAGTTACAATAACG 60.453 42.308 0.00 0.00 0.00 3.18
1488 1696 7.843490 TCTCATACAAAATACAGCAGTTACC 57.157 36.000 0.00 0.00 0.00 2.85
1492 1700 7.986085 AGTTTCTCATACAAAATACAGCAGT 57.014 32.000 0.00 0.00 0.00 4.40
1498 1706 8.507249 AGCTGTCAAGTTTCTCATACAAAATAC 58.493 33.333 0.00 0.00 0.00 1.89
1557 1765 0.947244 GTCATTCGCAAGGCCATAGG 59.053 55.000 5.01 0.00 38.47 2.57
1584 1792 5.651139 GCCAAGTCCAGATTGCATATATCAT 59.349 40.000 0.00 0.00 0.00 2.45
1646 1858 8.333908 CAATAGAAGAACTACATGCAACAGATC 58.666 37.037 0.00 0.00 33.62 2.75
1647 1859 7.826252 ACAATAGAAGAACTACATGCAACAGAT 59.174 33.333 0.00 0.00 33.62 2.90
1648 1860 7.161404 ACAATAGAAGAACTACATGCAACAGA 58.839 34.615 0.00 0.00 33.62 3.41
1649 1861 7.369803 ACAATAGAAGAACTACATGCAACAG 57.630 36.000 0.00 0.00 33.62 3.16
1650 1862 7.744087 AACAATAGAAGAACTACATGCAACA 57.256 32.000 0.00 0.00 33.62 3.33
1651 1863 9.463443 AAAAACAATAGAAGAACTACATGCAAC 57.537 29.630 0.00 0.00 33.62 4.17
1730 1942 5.385198 ACAAGAAAAGGGAAGCTACAATGA 58.615 37.500 0.00 0.00 0.00 2.57
1778 1990 9.427821 AAGGTATGAGTTAAGACATCTATGAGT 57.572 33.333 0.00 0.00 0.00 3.41
1815 2043 6.173339 GTTCCAGAAAATCCTCACATGACTA 58.827 40.000 0.00 0.00 0.00 2.59
1857 2085 1.817099 CCGCCTTCAGCTGCCTTAG 60.817 63.158 9.47 3.52 40.39 2.18
1866 2094 2.295253 AAATCGTCTACCGCCTTCAG 57.705 50.000 0.00 0.00 36.19 3.02
1889 2117 3.181476 ACTGTTCACAAAGCCAACCATTC 60.181 43.478 0.00 0.00 0.00 2.67
1907 2135 1.750193 CCAGTGTGGTTGTCAACTGT 58.250 50.000 15.17 0.00 31.35 3.55
1993 2221 2.171448 CCAAGGACTCGAAATCCATCCT 59.829 50.000 15.85 5.45 41.70 3.24
2004 2234 2.766828 AGAAGGGAATACCAAGGACTCG 59.233 50.000 0.00 0.00 43.89 4.18
2032 2262 4.780815 CTGTCTATTTGGGAGGCATGTAA 58.219 43.478 0.00 0.00 0.00 2.41
2061 2291 0.314935 CCTGGCGAAAAACACTGCAT 59.685 50.000 0.00 0.00 0.00 3.96
2114 2344 9.709304 TGACTATTTGGGTCCAGGAATTCATCC 62.709 44.444 7.93 0.00 39.42 3.51
2123 2353 1.561542 AGCTGACTATTTGGGTCCAGG 59.438 52.381 0.00 0.00 33.22 4.45
2351 2581 4.833390 AGTTACAGTAGGCCACAAGATTC 58.167 43.478 5.01 0.00 0.00 2.52
2396 2626 5.045286 ACCATTAAAGTCCTCATCTTCTGCT 60.045 40.000 0.00 0.00 0.00 4.24
2426 2656 2.186826 CATCGGGTCGCCCATTTCC 61.187 63.158 14.17 0.00 45.83 3.13
2640 2880 2.813754 TCTGTCTTCCTTGGCAAATTCG 59.186 45.455 0.00 0.00 0.00 3.34
2784 3024 2.803956 TGCATGATCACATATGACAGCG 59.196 45.455 10.38 1.95 37.79 5.18
2817 3057 9.573166 CATTAATGTCAATACTAATTCAGGGGA 57.427 33.333 7.32 0.00 0.00 4.81
2869 3142 7.649370 AATACAAGATGTCAAGATAGCATCG 57.351 36.000 0.00 0.00 42.56 3.84
2888 3161 6.892658 ACCAGTGCACATTTTTCTAATACA 57.107 33.333 21.04 0.00 0.00 2.29
2904 3183 4.702131 AGGAAATCAGTTGAATACCAGTGC 59.298 41.667 0.00 0.00 0.00 4.40
2909 3188 6.071952 TGCTTGAAGGAAATCAGTTGAATACC 60.072 38.462 0.00 0.00 0.00 2.73
3151 3430 4.418013 TCAACAATAATTGTGGTGAGCG 57.582 40.909 7.42 0.00 44.59 5.03
3232 3514 8.841300 GTGGATGAAGAAAGAAGAGTAAAACTT 58.159 33.333 0.00 0.00 0.00 2.66
3234 3516 7.228706 TGGTGGATGAAGAAAGAAGAGTAAAAC 59.771 37.037 0.00 0.00 0.00 2.43
3249 3531 4.155063 TCATGTGGTATGGTGGATGAAG 57.845 45.455 0.00 0.00 0.00 3.02
3674 4076 0.836606 TTGGGAGCTGTTCACTGTCA 59.163 50.000 0.00 0.00 0.00 3.58
3894 4301 1.134670 GTCACACTATCAGCACTCCCC 60.135 57.143 0.00 0.00 0.00 4.81
3896 4303 3.601443 AAGTCACACTATCAGCACTCC 57.399 47.619 0.00 0.00 0.00 3.85
3898 4305 5.368145 TCAAAAAGTCACACTATCAGCACT 58.632 37.500 0.00 0.00 0.00 4.40
3899 4306 5.673337 TCAAAAAGTCACACTATCAGCAC 57.327 39.130 0.00 0.00 0.00 4.40
3901 4308 6.246420 ACATCAAAAAGTCACACTATCAGC 57.754 37.500 0.00 0.00 0.00 4.26
3951 4369 0.874175 CATCAGGCATTGGCGCATTG 60.874 55.000 10.83 4.20 42.47 2.82
3952 4370 1.038681 TCATCAGGCATTGGCGCATT 61.039 50.000 10.83 0.00 42.47 3.56
3953 4371 1.454295 TCATCAGGCATTGGCGCAT 60.454 52.632 10.83 0.00 42.47 4.73
3954 4372 2.045143 TCATCAGGCATTGGCGCA 60.045 55.556 10.83 0.00 42.47 6.09
3955 4373 1.731433 ATGTCATCAGGCATTGGCGC 61.731 55.000 0.00 0.00 42.47 6.53
3956 4374 0.742505 AATGTCATCAGGCATTGGCG 59.257 50.000 4.38 0.44 42.47 5.69
3957 4375 2.973694 AAATGTCATCAGGCATTGGC 57.026 45.000 1.17 1.17 35.72 4.52
3958 4376 4.823157 TCAAAAATGTCATCAGGCATTGG 58.177 39.130 0.00 0.00 35.72 3.16
3979 4409 8.986477 ACATACAAAAGGCATTCATTAACTTC 57.014 30.769 0.00 0.00 0.00 3.01
4638 8371 3.243301 GCAAGGCATGAATCATCATCGTT 60.243 43.478 0.00 0.00 44.53 3.85
4640 8373 2.292292 TGCAAGGCATGAATCATCATCG 59.708 45.455 0.00 0.00 44.53 3.84
4641 8374 3.067601 TGTGCAAGGCATGAATCATCATC 59.932 43.478 0.00 0.00 44.53 2.92
4685 8418 6.929587 GCAGCTTGCATTAATATTGAGATG 57.070 37.500 0.00 1.61 44.26 2.90
5088 8822 2.096218 CAGCGTACAAAAGCAGGAAGAC 60.096 50.000 0.00 0.00 35.48 3.01
5148 8882 9.968743 GCACAACTACACTGTATATAAAAGTTC 57.031 33.333 0.00 0.00 0.00 3.01
5239 9051 1.681229 TAGGGCCAAAGGAGACCAAT 58.319 50.000 6.18 0.00 0.00 3.16
5245 9057 2.024941 AGAACCATTAGGGCCAAAGGAG 60.025 50.000 6.18 0.00 42.05 3.69
5472 9284 5.762045 ACTACCATTATCATTCGCAATTGC 58.238 37.500 20.76 20.76 37.78 3.56
5540 9352 3.262420 CTTTGTTGAGCTACTACGCCAT 58.738 45.455 0.00 0.00 0.00 4.40
5630 9442 3.629398 AGCCAGCTAATTGCAATACTGAC 59.371 43.478 26.49 19.79 45.94 3.51
5955 9772 2.026038 CGTACGCACATCGAACAAGTAC 59.974 50.000 0.52 0.40 41.67 2.73
6053 9870 3.555518 GCAACAAAGGAGACGATCAAAC 58.444 45.455 0.00 0.00 0.00 2.93
6139 10109 8.611654 AAGGAGAAAAACATTGGATTTCATTG 57.388 30.769 14.77 0.00 35.91 2.82
6286 10262 7.283127 TGCCAGAATTTCATTATGTTCTACCTC 59.717 37.037 0.00 0.00 29.82 3.85
6341 10318 2.149973 TTAGGAACGGAGGGAGTACC 57.850 55.000 0.00 0.00 40.67 3.34
6342 10319 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
6343 10320 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
6344 10321 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
6345 10322 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
6346 10323 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
6347 10324 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
6348 10325 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
6374 10351 9.872721 CGTATGTAGTCCATAGTAGAATCTCTA 57.127 37.037 0.00 0.00 36.71 2.43
6375 10352 7.825270 CCGTATGTAGTCCATAGTAGAATCTCT 59.175 40.741 0.00 0.00 36.71 3.10
6376 10353 7.823310 TCCGTATGTAGTCCATAGTAGAATCTC 59.177 40.741 0.00 0.00 36.71 2.75
6377 10354 7.687388 TCCGTATGTAGTCCATAGTAGAATCT 58.313 38.462 0.00 0.00 36.71 2.40
6378 10355 7.414319 GCTCCGTATGTAGTCCATAGTAGAATC 60.414 44.444 0.00 0.00 36.71 2.52
6379 10356 6.374894 GCTCCGTATGTAGTCCATAGTAGAAT 59.625 42.308 0.00 0.00 36.71 2.40
6380 10357 5.704515 GCTCCGTATGTAGTCCATAGTAGAA 59.295 44.000 0.00 0.00 36.71 2.10
6381 10358 5.221783 TGCTCCGTATGTAGTCCATAGTAGA 60.222 44.000 0.00 0.00 36.71 2.59
6382 10359 5.001874 TGCTCCGTATGTAGTCCATAGTAG 58.998 45.833 0.00 0.00 36.71 2.57
6383 10360 4.976864 TGCTCCGTATGTAGTCCATAGTA 58.023 43.478 0.00 0.00 36.71 1.82
6384 10361 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
6385 10362 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
6386 10363 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
6387 10364 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
6388 10365 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
6389 10366 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
6390 10367 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
6391 10368 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
6392 10369 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
6393 10370 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
6394 10371 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
6395 10372 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
6396 10373 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
6397 10374 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
6398 10375 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
6399 10376 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
6400 10377 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
6401 10378 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
6412 10389 9.817809 TGGACATATTTTAGAGTGTAGATTCAC 57.182 33.333 0.00 0.00 38.46 3.18
6430 10407 9.642343 ACTACATACGGATGTATATGGACATAT 57.358 33.333 20.64 9.53 45.42 1.78
6431 10408 9.470399 AACTACATACGGATGTATATGGACATA 57.530 33.333 20.64 0.00 45.42 2.29
6432 10409 7.956328 ACTACATACGGATGTATATGGACAT 57.044 36.000 20.64 0.00 45.42 3.06
6433 10410 7.770366 AACTACATACGGATGTATATGGACA 57.230 36.000 20.64 0.00 45.42 4.02
6434 10411 8.086522 ACAAACTACATACGGATGTATATGGAC 58.913 37.037 20.64 0.00 45.42 4.02
6435 10412 8.185506 ACAAACTACATACGGATGTATATGGA 57.814 34.615 20.64 0.00 45.42 3.41
6436 10413 9.569167 CTACAAACTACATACGGATGTATATGG 57.431 37.037 20.64 11.52 45.42 2.74
6439 10416 8.570488 CCACTACAAACTACATACGGATGTATA 58.430 37.037 20.64 9.08 45.42 1.47
6440 10417 7.286087 TCCACTACAAACTACATACGGATGTAT 59.714 37.037 20.64 8.38 45.42 2.29
6441 10418 6.602803 TCCACTACAAACTACATACGGATGTA 59.397 38.462 19.32 19.32 44.77 2.29
6443 10420 5.898174 TCCACTACAAACTACATACGGATG 58.102 41.667 5.94 5.94 39.16 3.51
6444 10421 6.534475 TTCCACTACAAACTACATACGGAT 57.466 37.500 0.00 0.00 0.00 4.18
6445 10422 5.981088 TTCCACTACAAACTACATACGGA 57.019 39.130 0.00 0.00 0.00 4.69
6446 10423 6.570692 AGATTCCACTACAAACTACATACGG 58.429 40.000 0.00 0.00 0.00 4.02
6447 10424 7.481642 AGAGATTCCACTACAAACTACATACG 58.518 38.462 0.00 0.00 0.00 3.06
6451 10428 9.706691 CTTTAAGAGATTCCACTACAAACTACA 57.293 33.333 0.00 0.00 0.00 2.74
6452 10429 9.924650 TCTTTAAGAGATTCCACTACAAACTAC 57.075 33.333 0.00 0.00 0.00 2.73
6453 10430 9.924650 GTCTTTAAGAGATTCCACTACAAACTA 57.075 33.333 0.00 0.00 36.61 2.24
6454 10431 8.652290 AGTCTTTAAGAGATTCCACTACAAACT 58.348 33.333 0.00 0.00 36.61 2.66
6455 10432 8.834749 AGTCTTTAAGAGATTCCACTACAAAC 57.165 34.615 0.00 0.00 36.61 2.93
6471 10448 7.625469 ACTCCCTCCATTCTTAAGTCTTTAAG 58.375 38.462 1.63 1.56 44.64 1.85
6472 10449 7.569599 ACTCCCTCCATTCTTAAGTCTTTAA 57.430 36.000 1.63 0.00 0.00 1.52
6473 10450 7.676893 TGTACTCCCTCCATTCTTAAGTCTTTA 59.323 37.037 1.63 0.00 0.00 1.85
6474 10451 6.500751 TGTACTCCCTCCATTCTTAAGTCTTT 59.499 38.462 1.63 0.00 0.00 2.52
6475 10452 6.023603 TGTACTCCCTCCATTCTTAAGTCTT 58.976 40.000 1.63 0.00 0.00 3.01
6476 10453 5.590818 TGTACTCCCTCCATTCTTAAGTCT 58.409 41.667 1.63 0.00 0.00 3.24
6477 10454 5.934402 TGTACTCCCTCCATTCTTAAGTC 57.066 43.478 1.63 0.00 0.00 3.01
6478 10455 7.989947 TTATGTACTCCCTCCATTCTTAAGT 57.010 36.000 1.63 0.00 0.00 2.24
6482 10459 8.606830 GGATAATTATGTACTCCCTCCATTCTT 58.393 37.037 1.78 0.00 0.00 2.52
6483 10460 7.964293 AGGATAATTATGTACTCCCTCCATTCT 59.036 37.037 1.78 0.00 0.00 2.40
6484 10461 8.043710 CAGGATAATTATGTACTCCCTCCATTC 58.956 40.741 1.78 0.00 0.00 2.67
6485 10462 7.517604 ACAGGATAATTATGTACTCCCTCCATT 59.482 37.037 1.78 0.00 0.00 3.16
6486 10463 7.025620 ACAGGATAATTATGTACTCCCTCCAT 58.974 38.462 1.78 0.00 0.00 3.41
6487 10464 6.390504 ACAGGATAATTATGTACTCCCTCCA 58.609 40.000 1.78 0.00 0.00 3.86
6488 10465 6.936968 ACAGGATAATTATGTACTCCCTCC 57.063 41.667 1.78 0.00 0.00 4.30
6489 10466 7.453752 TGGTACAGGATAATTATGTACTCCCTC 59.546 40.741 19.74 9.31 45.47 4.30
6490 10467 7.310634 TGGTACAGGATAATTATGTACTCCCT 58.689 38.462 19.74 10.17 45.47 4.20
6491 10468 7.549147 TGGTACAGGATAATTATGTACTCCC 57.451 40.000 19.74 8.47 45.47 4.30
6492 10469 7.549488 GCATGGTACAGGATAATTATGTACTCC 59.451 40.741 19.74 9.78 46.40 3.85
6493 10470 8.094548 TGCATGGTACAGGATAATTATGTACTC 58.905 37.037 19.74 13.64 46.40 2.59
6494 10471 7.973402 TGCATGGTACAGGATAATTATGTACT 58.027 34.615 19.74 7.57 46.40 2.73
6541 10523 9.703892 ACTATCACATATCTAGAAAAGCATCAC 57.296 33.333 0.00 0.00 0.00 3.06
6664 10651 8.777865 AGCATATACATGTTGGTCATATACAC 57.222 34.615 2.30 0.00 34.67 2.90
6685 10680 1.912043 AGCTCTTGGAGGTTGTAGCAT 59.088 47.619 0.00 0.00 37.04 3.79
6931 10929 9.469807 GTGTCCTCTACATAGATCAATTTACAG 57.530 37.037 0.00 0.00 41.10 2.74
7110 11109 6.100668 GTGCTTCTTGGGTAAACTCTAGTAG 58.899 44.000 0.00 0.00 0.00 2.57
7164 11165 4.274459 GCTAATACACTTGCAGGGATGAAG 59.726 45.833 0.00 0.00 0.00 3.02
7186 11187 7.855904 CCAACCAGTATGAAAGATAAAATACGC 59.144 37.037 0.00 0.00 39.69 4.42
7195 11196 6.484288 TCATGAACCAACCAGTATGAAAGAT 58.516 36.000 0.00 0.00 39.69 2.40
7196 11197 5.875224 TCATGAACCAACCAGTATGAAAGA 58.125 37.500 0.00 0.00 39.69 2.52
7197 11198 5.392380 GCTCATGAACCAACCAGTATGAAAG 60.392 44.000 0.00 0.00 39.69 2.62
7198 11199 4.458989 GCTCATGAACCAACCAGTATGAAA 59.541 41.667 0.00 0.00 39.69 2.69
7199 11200 4.009675 GCTCATGAACCAACCAGTATGAA 58.990 43.478 0.00 0.00 39.69 2.57
7201 11202 3.346315 TGCTCATGAACCAACCAGTATG 58.654 45.455 0.00 0.00 0.00 2.39
7202 11203 3.719268 TGCTCATGAACCAACCAGTAT 57.281 42.857 0.00 0.00 0.00 2.12
7204 11205 2.592102 ATGCTCATGAACCAACCAGT 57.408 45.000 0.00 0.00 0.00 4.00
7205 11206 3.256383 TGAAATGCTCATGAACCAACCAG 59.744 43.478 0.00 0.00 0.00 4.00
7206 11207 3.229293 TGAAATGCTCATGAACCAACCA 58.771 40.909 0.00 0.00 0.00 3.67
7207 11208 3.940209 TGAAATGCTCATGAACCAACC 57.060 42.857 0.00 0.00 0.00 3.77
7210 11211 5.769662 ACTAACTTGAAATGCTCATGAACCA 59.230 36.000 0.00 0.00 34.16 3.67
7211 11212 6.259550 ACTAACTTGAAATGCTCATGAACC 57.740 37.500 0.00 0.00 34.16 3.62
7212 11213 6.072508 TGGACTAACTTGAAATGCTCATGAAC 60.073 38.462 0.00 0.00 34.16 3.18
7213 11214 6.003326 TGGACTAACTTGAAATGCTCATGAA 58.997 36.000 0.00 0.00 34.16 2.57
7215 11216 5.885230 TGGACTAACTTGAAATGCTCATG 57.115 39.130 0.00 0.00 35.73 3.07
7216 11217 6.006449 ACTTGGACTAACTTGAAATGCTCAT 58.994 36.000 0.00 0.00 32.78 2.90
7217 11218 5.376625 ACTTGGACTAACTTGAAATGCTCA 58.623 37.500 0.00 0.00 0.00 4.26
7255 11278 1.845809 GCCTGCACAAAGGTCACTCG 61.846 60.000 0.00 0.00 39.75 4.18
7281 11304 0.878416 TGAAAAGGGAATTCGCCACG 59.122 50.000 18.08 0.00 0.00 4.94
7413 11437 1.199327 CTCTCTGTGTGGCATTGCAAG 59.801 52.381 11.39 0.00 0.00 4.01
7434 11982 5.013287 GGGAGAGGGAGGGAAAATATTAGTC 59.987 48.000 0.00 0.00 0.00 2.59
7522 12070 5.938322 TCAAGCAGATCCAAATTAAACGAC 58.062 37.500 0.00 0.00 0.00 4.34
7561 12109 0.590195 GCCACAGTTCAGCAAGAGTG 59.410 55.000 0.00 0.00 0.00 3.51
7567 12115 0.036952 GAGCTAGCCACAGTTCAGCA 60.037 55.000 12.13 0.00 34.65 4.41
7588 12136 1.011968 TCTTCGCGTGGTTTGATCCG 61.012 55.000 5.77 0.00 0.00 4.18
7711 12259 4.818546 CGCATACCTGAAAATTCTGGATCT 59.181 41.667 21.49 6.13 45.89 2.75
7731 12279 3.953712 ATCATCATCCGGTTATACGCA 57.046 42.857 0.00 0.00 0.00 5.24
7732 12280 4.092968 GGAAATCATCATCCGGTTATACGC 59.907 45.833 0.00 0.00 0.00 4.42
7733 12281 5.479306 AGGAAATCATCATCCGGTTATACG 58.521 41.667 0.00 0.00 40.78 3.06
7734 12282 6.817140 GGTAGGAAATCATCATCCGGTTATAC 59.183 42.308 0.00 0.00 40.78 1.47
7794 12342 9.122613 GTTATAATAAATAACGAGAGGTCGGTC 57.877 37.037 0.00 0.00 45.31 4.79
7818 12366 4.392940 CACAGGGATCTTCAGAAACTGTT 58.607 43.478 8.06 0.00 35.59 3.16
7836 12384 0.321122 GAGGGTCCAGAACAGCACAG 60.321 60.000 0.00 0.00 0.00 3.66
8038 12593 3.556513 GTCATCGCCTTGAGATAGTACG 58.443 50.000 0.00 0.00 0.00 3.67
8104 12659 2.096819 GTGACGTGCTCCTTGAAACAAA 59.903 45.455 0.00 0.00 0.00 2.83
8173 12728 5.633830 ATCTGGTGATTTAACTGTGCAAG 57.366 39.130 0.00 0.00 0.00 4.01
8186 12741 7.083062 TCAGGCAATTATAGAATCTGGTGAT 57.917 36.000 0.00 0.00 33.70 3.06
8191 12746 7.318893 TCGAGATCAGGCAATTATAGAATCTG 58.681 38.462 0.00 0.00 0.00 2.90
8200 12755 2.543861 GCGTCTCGAGATCAGGCAATTA 60.544 50.000 19.90 0.00 0.00 1.40
8220 15604 3.338249 TGCAGAGTTAGTCATGGAAAGC 58.662 45.455 0.00 0.00 0.00 3.51
8261 15645 1.154016 CCACAGTGGTACTCGCTCG 60.154 63.158 11.99 0.00 33.21 5.03
8275 15659 3.164268 ACCATGCTGAAATTTAGCCACA 58.836 40.909 7.30 0.00 40.42 4.17
8342 15728 2.563261 ATGCATCAGGCCATGACTAG 57.437 50.000 5.01 1.61 41.91 2.57
8364 16088 1.816835 ACAACTCAGCAGGCATCAATG 59.183 47.619 0.00 0.00 0.00 2.82
8409 16133 5.562506 ACTGATCGAAAGTTGAGACGATA 57.437 39.130 0.00 0.00 43.72 2.92
8427 16151 5.237815 ACATTAACTCTTGATGCGAACTGA 58.762 37.500 0.00 0.00 30.44 3.41
8433 16157 9.196552 TCTTGATATACATTAACTCTTGATGCG 57.803 33.333 0.00 0.00 30.44 4.73
8486 16235 4.255301 ACAGACAAACACGGTACAAGAAA 58.745 39.130 0.00 0.00 0.00 2.52
8508 16283 7.720957 AGGCTGAAGCATATATGTTGTTATCAA 59.279 33.333 14.14 0.00 44.36 2.57
8534 16311 0.179059 TGCAAGTGAACGAGCTGGAA 60.179 50.000 1.44 0.00 0.00 3.53
8559 16354 5.696270 GCCACGATATATGTCATCTGAAACA 59.304 40.000 0.11 0.00 0.00 2.83
8561 16356 5.852827 TGCCACGATATATGTCATCTGAAA 58.147 37.500 0.11 0.00 0.00 2.69
8571 16366 9.462174 ACAAAATAATGTTTGCCACGATATATG 57.538 29.630 0.00 0.00 41.33 1.78
8576 16371 6.145371 GTGAACAAAATAATGTTTGCCACGAT 59.855 34.615 0.00 0.00 43.31 3.73
8577 16372 5.460419 GTGAACAAAATAATGTTTGCCACGA 59.540 36.000 0.00 0.00 43.31 4.35
8578 16373 5.461737 AGTGAACAAAATAATGTTTGCCACG 59.538 36.000 13.32 0.00 43.31 4.94
8580 16375 6.577103 TGAGTGAACAAAATAATGTTTGCCA 58.423 32.000 0.00 0.00 43.31 4.92
8581 16376 7.437862 TCTTGAGTGAACAAAATAATGTTTGCC 59.562 33.333 0.00 0.00 43.31 4.52
8582 16377 8.351495 TCTTGAGTGAACAAAATAATGTTTGC 57.649 30.769 0.00 0.00 43.31 3.68
8630 16425 8.599876 TTTCATGTCGTTGATTTGATTATTCG 57.400 30.769 0.00 0.00 0.00 3.34
8666 16474 7.173390 GGATTATTTCAGAGTAGTTGGTATGCC 59.827 40.741 0.00 0.00 0.00 4.40
8754 16563 2.710471 TGGCAGCCAGGATATATGTTCA 59.290 45.455 11.22 0.00 0.00 3.18
8755 16564 3.077359 GTGGCAGCCAGGATATATGTTC 58.923 50.000 16.83 0.00 32.34 3.18
8779 16588 2.483363 CCAGAGAGCAGTCATCCATGTC 60.483 54.545 0.00 0.00 0.00 3.06
8806 16618 2.301346 GAAGCGGAATGGACCATGAAT 58.699 47.619 8.02 0.00 0.00 2.57
8807 16619 1.004161 TGAAGCGGAATGGACCATGAA 59.996 47.619 8.02 0.00 0.00 2.57
8809 16621 1.133025 GTTGAAGCGGAATGGACCATG 59.867 52.381 8.02 0.00 0.00 3.66
8810 16622 1.463674 GTTGAAGCGGAATGGACCAT 58.536 50.000 0.00 0.00 0.00 3.55
8812 16624 1.313091 GGGTTGAAGCGGAATGGACC 61.313 60.000 0.00 0.00 0.00 4.46
8813 16625 0.322546 AGGGTTGAAGCGGAATGGAC 60.323 55.000 0.00 0.00 0.00 4.02
8814 16626 0.404040 AAGGGTTGAAGCGGAATGGA 59.596 50.000 0.00 0.00 0.00 3.41
8816 16628 2.035832 ACAAAAGGGTTGAAGCGGAATG 59.964 45.455 0.00 0.00 0.00 2.67
8818 16630 1.770294 ACAAAAGGGTTGAAGCGGAA 58.230 45.000 0.00 0.00 0.00 4.30
8819 16631 2.642154 TACAAAAGGGTTGAAGCGGA 57.358 45.000 0.00 0.00 0.00 5.54
8820 16632 2.882137 TCTTACAAAAGGGTTGAAGCGG 59.118 45.455 0.00 0.00 33.22 5.52
8821 16633 3.609409 GCTCTTACAAAAGGGTTGAAGCG 60.609 47.826 0.00 0.00 35.44 4.68
8822 16634 3.609409 CGCTCTTACAAAAGGGTTGAAGC 60.609 47.826 0.00 0.00 35.44 3.86
8824 16636 2.882137 CCGCTCTTACAAAAGGGTTGAA 59.118 45.455 0.00 0.00 35.44 2.69
8825 16637 2.500229 CCGCTCTTACAAAAGGGTTGA 58.500 47.619 0.00 0.00 35.44 3.18
8827 16639 1.905637 CCCGCTCTTACAAAAGGGTT 58.094 50.000 0.00 0.00 35.44 4.11
8843 16667 4.430765 CCCGGTTCGAGACACCCG 62.431 72.222 0.00 1.63 40.12 5.28
8849 16673 2.646175 CCTTGCTCCCGGTTCGAGA 61.646 63.158 10.08 0.00 0.00 4.04
8880 16705 2.224018 TGCCATTTCCAGTTTTGCTGTC 60.224 45.455 0.00 0.00 43.55 3.51
8881 16706 1.761784 TGCCATTTCCAGTTTTGCTGT 59.238 42.857 0.00 0.00 43.55 4.40
8913 16738 2.240493 ATTACGGCATTCTCCTTCGG 57.760 50.000 0.00 0.00 0.00 4.30
8914 16739 2.731976 GCTATTACGGCATTCTCCTTCG 59.268 50.000 0.00 0.00 0.00 3.79
8928 16753 6.641474 ACTTTGTTGGGTCTAGAGCTATTAC 58.359 40.000 20.67 11.71 0.00 1.89
8938 16763 2.875933 CGCTGAAACTTTGTTGGGTCTA 59.124 45.455 0.00 0.00 0.00 2.59
8999 16863 2.679450 TCTATTGGTCGTGTTGGTTCG 58.321 47.619 0.00 0.00 0.00 3.95
9011 16875 9.277783 CTGTATAAATTGCTAGCTTCTATTGGT 57.722 33.333 17.23 5.90 0.00 3.67
9047 16911 1.956629 AGGCACTATCGGTTCCCGTG 61.957 60.000 2.21 0.00 43.20 4.94
9059 16923 0.615331 CTTCTCCTTGGCAGGCACTA 59.385 55.000 0.00 0.00 40.58 2.74
9118 16983 5.366186 TGTGTCCAGTAAAGTAGTAACCCAA 59.634 40.000 0.00 0.00 0.00 4.12
9129 16994 2.031682 GCTGCTGTTGTGTCCAGTAAAG 60.032 50.000 0.00 0.00 32.41 1.85
9139 17004 1.132834 TGTGTCTTTGCTGCTGTTGTG 59.867 47.619 0.00 0.00 0.00 3.33
9143 17008 0.749091 TGCTGTGTCTTTGCTGCTGT 60.749 50.000 0.00 0.00 0.00 4.40
9144 17009 0.382873 TTGCTGTGTCTTTGCTGCTG 59.617 50.000 0.00 0.00 0.00 4.41
9145 17010 0.383231 GTTGCTGTGTCTTTGCTGCT 59.617 50.000 0.00 0.00 0.00 4.24
9146 17011 0.101040 TGTTGCTGTGTCTTTGCTGC 59.899 50.000 0.00 0.00 0.00 5.25
9147 17012 2.097954 TCTTGTTGCTGTGTCTTTGCTG 59.902 45.455 0.00 0.00 0.00 4.41
9148 17013 2.098117 GTCTTGTTGCTGTGTCTTTGCT 59.902 45.455 0.00 0.00 0.00 3.91
9149 17014 2.159393 TGTCTTGTTGCTGTGTCTTTGC 60.159 45.455 0.00 0.00 0.00 3.68
9150 17015 3.688272 CTGTCTTGTTGCTGTGTCTTTG 58.312 45.455 0.00 0.00 0.00 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.