Multiple sequence alignment - TraesCS5B01G017700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G017700 chr5B 100.000 2798 0 0 1 2798 16418933 16421730 0.000000e+00 5168.0
1 TraesCS5B01G017700 chr5A 90.323 1395 80 14 506 1879 16974114 16975474 0.000000e+00 1777.0
2 TraesCS5B01G017700 chr5A 82.206 281 38 9 2521 2796 16976683 16976956 6.030000e-57 231.0
3 TraesCS5B01G017700 chr5A 78.667 150 18 11 1879 2019 16975494 16975638 1.380000e-13 87.9
4 TraesCS5B01G017700 chr5D 91.423 956 58 12 928 1873 23073960 23074901 0.000000e+00 1290.0
5 TraesCS5B01G017700 chr5D 91.643 359 23 7 2172 2526 23075305 23075660 9.010000e-135 490.0
6 TraesCS5B01G017700 chr5D 88.587 368 25 10 506 873 23073614 23073964 5.540000e-117 431.0
7 TraesCS5B01G017700 chr5D 89.806 206 15 4 309 510 23073344 23073547 2.760000e-65 259.0
8 TraesCS5B01G017700 chr5D 83.858 254 19 10 2521 2758 23075694 23075941 3.630000e-54 222.0
9 TraesCS5B01G017700 chr5D 91.139 79 7 0 2045 2123 23074999 23075077 1.060000e-19 108.0
10 TraesCS5B01G017700 chr7A 80.966 704 96 26 996 1674 709638943 709639633 8.880000e-145 523.0
11 TraesCS5B01G017700 chr7A 79.823 451 70 9 1065 1497 709674472 709674919 2.710000e-80 309.0
12 TraesCS5B01G017700 chr7A 79.515 454 66 13 1070 1499 709998862 709998412 5.860000e-77 298.0
13 TraesCS5B01G017700 chr2B 97.987 298 6 0 1 298 691785279 691784982 4.130000e-143 518.0
14 TraesCS5B01G017700 chr7D 80.512 703 92 26 996 1674 616899882 616900563 5.380000e-137 497.0
15 TraesCS5B01G017700 chr7D 74.783 345 59 16 1069 1389 617374325 617373985 2.260000e-26 130.0
16 TraesCS5B01G017700 chr7B 80.282 710 96 28 996 1674 710990574 710991270 1.940000e-136 496.0
17 TraesCS5B01G017700 chr7B 78.647 473 77 15 1069 1520 571893078 571892609 2.730000e-75 292.0
18 TraesCS5B01G017700 chr7B 81.102 127 18 2 1070 1190 711485437 711485311 2.290000e-16 97.1
19 TraesCS5B01G017700 chr3A 96.633 297 10 0 2 298 183579 183283 6.960000e-136 494.0
20 TraesCS5B01G017700 chr4D 95.973 298 12 0 1 298 7072788 7073085 4.190000e-133 484.0
21 TraesCS5B01G017700 chr4D 92.642 299 20 2 1 298 506415383 506415680 1.990000e-116 429.0
22 TraesCS5B01G017700 chr2A 94.966 298 15 0 1 298 734613972 734613675 4.220000e-128 468.0
23 TraesCS5B01G017700 chr1A 94.966 298 15 0 1 298 471597300 471597003 4.220000e-128 468.0
24 TraesCS5B01G017700 chr1A 89.262 298 32 0 1 298 297704951 297705248 9.460000e-100 374.0
25 TraesCS5B01G017700 chr4A 94.295 298 17 0 1 298 516340406 516340109 9.130000e-125 457.0
26 TraesCS5B01G017700 chr6D 91.275 298 26 0 1 298 461521046 461520749 9.330000e-110 407.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G017700 chr5B 16418933 16421730 2797 False 5168.000000 5168 100.000000 1 2798 1 chr5B.!!$F1 2797
1 TraesCS5B01G017700 chr5A 16974114 16976956 2842 False 698.633333 1777 83.732000 506 2796 3 chr5A.!!$F1 2290
2 TraesCS5B01G017700 chr5D 23073344 23075941 2597 False 466.666667 1290 89.409333 309 2758 6 chr5D.!!$F1 2449
3 TraesCS5B01G017700 chr7A 709638943 709639633 690 False 523.000000 523 80.966000 996 1674 1 chr7A.!!$F1 678
4 TraesCS5B01G017700 chr7D 616899882 616900563 681 False 497.000000 497 80.512000 996 1674 1 chr7D.!!$F1 678
5 TraesCS5B01G017700 chr7B 710990574 710991270 696 False 496.000000 496 80.282000 996 1674 1 chr7B.!!$F1 678

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 776 0.034337 TTGGTTCCTGAGGTACGTGC 59.966 55.0 0.0 0.0 0.0 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2502 3306 0.176219 AGTTCGAACCAACACGACCA 59.824 50.0 24.22 0.0 38.24 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.731652 TCTTGCACAAATGGGTTTGAG 57.268 42.857 7.79 1.54 46.03 3.02
21 22 2.364970 TCTTGCACAAATGGGTTTGAGG 59.635 45.455 7.79 1.65 46.03 3.86
22 23 2.079170 TGCACAAATGGGTTTGAGGA 57.921 45.000 7.79 0.00 46.03 3.71
23 24 2.607499 TGCACAAATGGGTTTGAGGAT 58.393 42.857 7.79 0.00 46.03 3.24
24 25 2.299582 TGCACAAATGGGTTTGAGGATG 59.700 45.455 7.79 0.00 46.03 3.51
25 26 2.932187 GCACAAATGGGTTTGAGGATGC 60.932 50.000 7.79 3.80 46.03 3.91
26 27 1.901833 ACAAATGGGTTTGAGGATGCC 59.098 47.619 7.79 0.00 46.03 4.40
27 28 1.135024 CAAATGGGTTTGAGGATGCCG 60.135 52.381 0.00 0.00 46.03 5.69
28 29 1.322538 AATGGGTTTGAGGATGCCGC 61.323 55.000 0.00 0.00 0.00 6.53
29 30 3.508840 GGGTTTGAGGATGCCGCG 61.509 66.667 0.00 0.00 0.00 6.46
30 31 2.746277 GGTTTGAGGATGCCGCGT 60.746 61.111 4.92 0.00 0.00 6.01
31 32 2.750888 GGTTTGAGGATGCCGCGTC 61.751 63.158 4.92 3.80 0.00 5.19
32 33 2.813474 TTTGAGGATGCCGCGTCG 60.813 61.111 4.92 0.00 0.00 5.12
43 44 4.421479 CGCGTCGGGAAGTGAGCT 62.421 66.667 2.62 0.00 0.00 4.09
44 45 2.811317 GCGTCGGGAAGTGAGCTG 60.811 66.667 0.00 0.00 0.00 4.24
45 46 2.651361 CGTCGGGAAGTGAGCTGT 59.349 61.111 0.00 0.00 0.00 4.40
46 47 1.880894 CGTCGGGAAGTGAGCTGTA 59.119 57.895 0.00 0.00 0.00 2.74
47 48 0.179161 CGTCGGGAAGTGAGCTGTAG 60.179 60.000 0.00 0.00 0.00 2.74
48 49 0.173708 GTCGGGAAGTGAGCTGTAGG 59.826 60.000 0.00 0.00 0.00 3.18
49 50 0.039180 TCGGGAAGTGAGCTGTAGGA 59.961 55.000 0.00 0.00 0.00 2.94
50 51 1.115467 CGGGAAGTGAGCTGTAGGAT 58.885 55.000 0.00 0.00 0.00 3.24
51 52 1.067821 CGGGAAGTGAGCTGTAGGATC 59.932 57.143 0.00 0.00 0.00 3.36
52 53 2.393646 GGGAAGTGAGCTGTAGGATCT 58.606 52.381 0.00 0.00 0.00 2.75
53 54 2.102252 GGGAAGTGAGCTGTAGGATCTG 59.898 54.545 0.00 0.00 0.00 2.90
54 55 2.763448 GGAAGTGAGCTGTAGGATCTGT 59.237 50.000 0.00 0.00 0.00 3.41
55 56 3.196685 GGAAGTGAGCTGTAGGATCTGTT 59.803 47.826 0.00 0.00 0.00 3.16
56 57 3.883830 AGTGAGCTGTAGGATCTGTTG 57.116 47.619 0.00 0.00 0.00 3.33
57 58 2.499289 AGTGAGCTGTAGGATCTGTTGG 59.501 50.000 0.00 0.00 0.00 3.77
58 59 2.497675 GTGAGCTGTAGGATCTGTTGGA 59.502 50.000 0.00 0.00 0.00 3.53
59 60 2.762887 TGAGCTGTAGGATCTGTTGGAG 59.237 50.000 0.00 0.00 0.00 3.86
60 61 3.027412 GAGCTGTAGGATCTGTTGGAGA 58.973 50.000 0.00 0.00 34.25 3.71
61 62 3.030291 AGCTGTAGGATCTGTTGGAGAG 58.970 50.000 0.00 0.00 32.80 3.20
62 63 2.102252 GCTGTAGGATCTGTTGGAGAGG 59.898 54.545 0.00 0.00 32.80 3.69
63 64 2.697751 CTGTAGGATCTGTTGGAGAGGG 59.302 54.545 0.00 0.00 32.80 4.30
64 65 2.044492 TGTAGGATCTGTTGGAGAGGGT 59.956 50.000 0.00 0.00 32.80 4.34
65 66 1.872773 AGGATCTGTTGGAGAGGGTC 58.127 55.000 0.00 0.00 32.80 4.46
66 67 1.079490 AGGATCTGTTGGAGAGGGTCA 59.921 52.381 0.00 0.00 32.80 4.02
67 68 1.909302 GGATCTGTTGGAGAGGGTCAA 59.091 52.381 0.00 0.00 32.80 3.18
68 69 2.507471 GGATCTGTTGGAGAGGGTCAAT 59.493 50.000 0.00 0.00 32.80 2.57
69 70 3.539604 GATCTGTTGGAGAGGGTCAATG 58.460 50.000 0.00 0.00 32.80 2.82
70 71 1.630369 TCTGTTGGAGAGGGTCAATGG 59.370 52.381 0.00 0.00 0.00 3.16
71 72 0.038166 TGTTGGAGAGGGTCAATGGC 59.962 55.000 0.00 0.00 0.00 4.40
72 73 1.026718 GTTGGAGAGGGTCAATGGCG 61.027 60.000 0.00 0.00 0.00 5.69
73 74 1.198094 TTGGAGAGGGTCAATGGCGA 61.198 55.000 0.00 0.00 0.00 5.54
74 75 1.144936 GGAGAGGGTCAATGGCGAG 59.855 63.158 0.00 0.00 0.00 5.03
75 76 1.144936 GAGAGGGTCAATGGCGAGG 59.855 63.158 0.00 0.00 0.00 4.63
76 77 1.306141 AGAGGGTCAATGGCGAGGA 60.306 57.895 0.00 0.00 0.00 3.71
77 78 0.692419 AGAGGGTCAATGGCGAGGAT 60.692 55.000 0.00 0.00 0.00 3.24
78 79 0.533755 GAGGGTCAATGGCGAGGATG 60.534 60.000 0.00 0.00 0.00 3.51
79 80 0.982852 AGGGTCAATGGCGAGGATGA 60.983 55.000 0.00 0.00 0.00 2.92
80 81 0.107214 GGGTCAATGGCGAGGATGAA 60.107 55.000 0.00 0.00 0.00 2.57
81 82 1.303309 GGTCAATGGCGAGGATGAAG 58.697 55.000 0.00 0.00 0.00 3.02
82 83 1.134401 GGTCAATGGCGAGGATGAAGA 60.134 52.381 0.00 0.00 0.00 2.87
83 84 2.208431 GTCAATGGCGAGGATGAAGAG 58.792 52.381 0.00 0.00 0.00 2.85
84 85 0.942962 CAATGGCGAGGATGAAGAGC 59.057 55.000 0.00 0.00 0.00 4.09
85 86 0.543277 AATGGCGAGGATGAAGAGCA 59.457 50.000 0.00 0.00 0.00 4.26
86 87 0.763652 ATGGCGAGGATGAAGAGCAT 59.236 50.000 0.00 0.00 40.77 3.79
96 97 3.843999 GATGAAGAGCATCGGAGATACC 58.156 50.000 0.00 0.00 43.57 2.73
105 106 2.971452 GGAGATACCGGATCGCCC 59.029 66.667 9.46 10.00 46.14 6.13
106 107 1.606889 GGAGATACCGGATCGCCCT 60.607 63.158 9.46 0.00 46.14 5.19
107 108 1.587054 GAGATACCGGATCGCCCTG 59.413 63.158 9.46 0.00 39.80 4.45
108 109 0.894184 GAGATACCGGATCGCCCTGA 60.894 60.000 9.46 0.00 39.80 3.86
109 110 1.179814 AGATACCGGATCGCCCTGAC 61.180 60.000 9.46 0.00 39.80 3.51
110 111 2.473664 GATACCGGATCGCCCTGACG 62.474 65.000 9.46 0.00 0.00 4.35
113 114 4.271816 CGGATCGCCCTGACGGAG 62.272 72.222 0.00 0.00 0.00 4.63
114 115 3.917760 GGATCGCCCTGACGGAGG 61.918 72.222 0.00 0.00 42.38 4.30
115 116 4.593864 GATCGCCCTGACGGAGGC 62.594 72.222 4.21 4.21 46.17 4.70
120 121 3.330720 CCCTGACGGAGGCCCTTT 61.331 66.667 0.00 0.00 41.19 3.11
121 122 2.045926 CCTGACGGAGGCCCTTTG 60.046 66.667 0.00 0.00 34.01 2.77
122 123 2.747855 CTGACGGAGGCCCTTTGC 60.748 66.667 0.00 0.00 40.16 3.68
123 124 3.551496 CTGACGGAGGCCCTTTGCA 62.551 63.158 0.00 0.00 43.89 4.08
124 125 2.044946 GACGGAGGCCCTTTGCAT 60.045 61.111 0.00 0.00 43.89 3.96
125 126 2.361610 ACGGAGGCCCTTTGCATG 60.362 61.111 0.00 0.00 43.89 4.06
126 127 2.361610 CGGAGGCCCTTTGCATGT 60.362 61.111 0.00 0.00 43.89 3.21
127 128 2.409870 CGGAGGCCCTTTGCATGTC 61.410 63.158 0.00 0.00 43.89 3.06
128 129 1.000396 GGAGGCCCTTTGCATGTCT 60.000 57.895 0.00 0.00 43.89 3.41
129 130 1.318158 GGAGGCCCTTTGCATGTCTG 61.318 60.000 0.00 0.00 43.89 3.51
130 131 0.322816 GAGGCCCTTTGCATGTCTGA 60.323 55.000 0.00 0.00 43.89 3.27
131 132 0.112995 AGGCCCTTTGCATGTCTGAA 59.887 50.000 0.00 0.00 43.89 3.02
132 133 0.244721 GGCCCTTTGCATGTCTGAAC 59.755 55.000 0.00 0.00 43.89 3.18
133 134 0.961019 GCCCTTTGCATGTCTGAACA 59.039 50.000 0.00 0.00 40.77 3.18
135 136 2.416431 GCCCTTTGCATGTCTGAACATC 60.416 50.000 0.00 0.00 44.41 3.06
136 137 3.087031 CCCTTTGCATGTCTGAACATCT 58.913 45.455 0.00 0.00 44.41 2.90
137 138 3.508793 CCCTTTGCATGTCTGAACATCTT 59.491 43.478 0.00 0.00 44.41 2.40
138 139 4.021719 CCCTTTGCATGTCTGAACATCTTT 60.022 41.667 0.00 0.00 44.41 2.52
139 140 5.159209 CCTTTGCATGTCTGAACATCTTTC 58.841 41.667 0.00 0.00 44.41 2.62
140 141 4.771590 TTGCATGTCTGAACATCTTTCC 57.228 40.909 0.00 0.00 44.41 3.13
141 142 2.743664 TGCATGTCTGAACATCTTTCCG 59.256 45.455 0.00 0.00 44.41 4.30
142 143 2.096496 GCATGTCTGAACATCTTTCCGG 59.904 50.000 0.00 0.00 44.41 5.14
143 144 2.472695 TGTCTGAACATCTTTCCGGG 57.527 50.000 0.00 0.00 0.00 5.73
144 145 1.003118 TGTCTGAACATCTTTCCGGGG 59.997 52.381 0.00 0.00 0.00 5.73
145 146 1.003233 GTCTGAACATCTTTCCGGGGT 59.997 52.381 0.00 0.00 0.00 4.95
146 147 1.702957 TCTGAACATCTTTCCGGGGTT 59.297 47.619 0.00 0.00 0.00 4.11
147 148 2.107552 TCTGAACATCTTTCCGGGGTTT 59.892 45.455 0.00 0.00 0.00 3.27
148 149 2.488153 CTGAACATCTTTCCGGGGTTTC 59.512 50.000 0.00 0.00 0.00 2.78
149 150 1.816835 GAACATCTTTCCGGGGTTTCC 59.183 52.381 0.00 0.00 0.00 3.13
159 160 1.880894 GGGGTTTCCGTTAAGCAGC 59.119 57.895 0.00 0.00 0.00 5.25
160 161 0.891904 GGGGTTTCCGTTAAGCAGCA 60.892 55.000 0.00 0.00 0.00 4.41
161 162 0.240145 GGGTTTCCGTTAAGCAGCAC 59.760 55.000 0.00 0.00 0.00 4.40
162 163 1.235724 GGTTTCCGTTAAGCAGCACT 58.764 50.000 0.00 0.00 0.00 4.40
163 164 1.197036 GGTTTCCGTTAAGCAGCACTC 59.803 52.381 0.00 0.00 0.00 3.51
164 165 2.143925 GTTTCCGTTAAGCAGCACTCT 58.856 47.619 0.00 0.00 0.00 3.24
165 166 2.543777 TTCCGTTAAGCAGCACTCTT 57.456 45.000 0.00 0.00 0.00 2.85
166 167 1.795768 TCCGTTAAGCAGCACTCTTG 58.204 50.000 0.00 0.00 0.00 3.02
167 168 1.343142 TCCGTTAAGCAGCACTCTTGA 59.657 47.619 0.00 0.00 0.00 3.02
168 169 2.143122 CCGTTAAGCAGCACTCTTGAA 58.857 47.619 0.00 0.00 0.00 2.69
169 170 2.158449 CCGTTAAGCAGCACTCTTGAAG 59.842 50.000 0.00 0.00 0.00 3.02
170 171 3.059884 CGTTAAGCAGCACTCTTGAAGA 58.940 45.455 0.00 0.00 0.00 2.87
171 172 3.494626 CGTTAAGCAGCACTCTTGAAGAA 59.505 43.478 0.00 0.00 0.00 2.52
172 173 4.376819 CGTTAAGCAGCACTCTTGAAGAAG 60.377 45.833 0.00 0.00 0.00 2.85
173 174 3.482156 AAGCAGCACTCTTGAAGAAGA 57.518 42.857 0.00 0.00 36.72 2.87
183 184 4.881019 TCTTGAAGAAGAGGAAGACAGG 57.119 45.455 0.00 0.00 32.98 4.00
184 185 3.580458 TCTTGAAGAAGAGGAAGACAGGG 59.420 47.826 0.00 0.00 32.98 4.45
185 186 3.260269 TGAAGAAGAGGAAGACAGGGA 57.740 47.619 0.00 0.00 0.00 4.20
186 187 3.169099 TGAAGAAGAGGAAGACAGGGAG 58.831 50.000 0.00 0.00 0.00 4.30
187 188 3.181417 TGAAGAAGAGGAAGACAGGGAGA 60.181 47.826 0.00 0.00 0.00 3.71
188 189 3.100207 AGAAGAGGAAGACAGGGAGAG 57.900 52.381 0.00 0.00 0.00 3.20
189 190 2.652348 AGAAGAGGAAGACAGGGAGAGA 59.348 50.000 0.00 0.00 0.00 3.10
190 191 2.525105 AGAGGAAGACAGGGAGAGAC 57.475 55.000 0.00 0.00 0.00 3.36
191 192 1.713647 AGAGGAAGACAGGGAGAGACA 59.286 52.381 0.00 0.00 0.00 3.41
192 193 2.314549 AGAGGAAGACAGGGAGAGACAT 59.685 50.000 0.00 0.00 0.00 3.06
193 194 3.529734 AGAGGAAGACAGGGAGAGACATA 59.470 47.826 0.00 0.00 0.00 2.29
194 195 4.169856 AGAGGAAGACAGGGAGAGACATAT 59.830 45.833 0.00 0.00 0.00 1.78
195 196 4.479158 AGGAAGACAGGGAGAGACATATC 58.521 47.826 0.00 0.00 0.00 1.63
196 197 3.576550 GGAAGACAGGGAGAGACATATCC 59.423 52.174 0.00 0.00 35.97 2.59
197 198 3.981516 AGACAGGGAGAGACATATCCA 57.018 47.619 0.00 0.00 38.67 3.41
198 199 3.843422 AGACAGGGAGAGACATATCCAG 58.157 50.000 0.00 0.00 38.67 3.86
199 200 3.206412 AGACAGGGAGAGACATATCCAGT 59.794 47.826 0.00 0.00 38.67 4.00
200 201 3.571590 ACAGGGAGAGACATATCCAGTC 58.428 50.000 0.00 0.00 38.67 3.51
201 202 8.298493 AAGACAGGGAGAGACATATCCAGTCT 62.298 46.154 10.81 10.81 46.77 3.24
206 207 2.073252 AGACATATCCAGTCTCGCCA 57.927 50.000 0.00 0.00 42.40 5.69
207 208 1.683917 AGACATATCCAGTCTCGCCAC 59.316 52.381 0.00 0.00 42.40 5.01
208 209 0.753262 ACATATCCAGTCTCGCCACC 59.247 55.000 0.00 0.00 0.00 4.61
209 210 0.319040 CATATCCAGTCTCGCCACCG 60.319 60.000 0.00 0.00 0.00 4.94
210 211 2.088674 ATATCCAGTCTCGCCACCGC 62.089 60.000 0.00 0.00 0.00 5.68
220 221 3.694538 GCCACCGCTGCCCAAAAT 61.695 61.111 0.00 0.00 0.00 1.82
221 222 2.573340 CCACCGCTGCCCAAAATC 59.427 61.111 0.00 0.00 0.00 2.17
222 223 2.179018 CACCGCTGCCCAAAATCG 59.821 61.111 0.00 0.00 0.00 3.34
223 224 2.033448 ACCGCTGCCCAAAATCGA 59.967 55.556 0.00 0.00 0.00 3.59
224 225 2.040544 ACCGCTGCCCAAAATCGAG 61.041 57.895 0.00 0.00 0.00 4.04
225 226 2.764314 CCGCTGCCCAAAATCGAGG 61.764 63.158 0.00 0.00 0.00 4.63
229 230 3.274067 GCCCAAAATCGAGGCGTT 58.726 55.556 0.00 0.00 36.84 4.84
230 231 1.154035 GCCCAAAATCGAGGCGTTG 60.154 57.895 0.00 0.00 36.84 4.10
231 232 1.154035 CCCAAAATCGAGGCGTTGC 60.154 57.895 0.00 0.00 0.00 4.17
232 233 1.578926 CCAAAATCGAGGCGTTGCA 59.421 52.632 0.00 0.00 0.00 4.08
233 234 0.171007 CCAAAATCGAGGCGTTGCAT 59.829 50.000 0.00 0.00 0.00 3.96
234 235 1.261989 CAAAATCGAGGCGTTGCATG 58.738 50.000 0.00 0.00 0.00 4.06
235 236 1.135717 CAAAATCGAGGCGTTGCATGA 60.136 47.619 0.00 0.00 0.00 3.07
236 237 0.447801 AAATCGAGGCGTTGCATGAC 59.552 50.000 0.00 0.00 0.00 3.06
237 238 1.369091 AATCGAGGCGTTGCATGACC 61.369 55.000 0.00 0.00 0.00 4.02
238 239 2.244117 ATCGAGGCGTTGCATGACCT 62.244 55.000 0.00 1.79 34.43 3.85
239 240 2.456119 CGAGGCGTTGCATGACCTC 61.456 63.158 15.87 15.87 44.37 3.85
240 241 2.045926 AGGCGTTGCATGACCTCC 60.046 61.111 0.00 0.00 0.00 4.30
241 242 2.359850 GGCGTTGCATGACCTCCA 60.360 61.111 0.00 0.00 0.00 3.86
242 243 2.401766 GGCGTTGCATGACCTCCAG 61.402 63.158 0.00 0.00 0.00 3.86
243 244 3.044059 GCGTTGCATGACCTCCAGC 62.044 63.158 0.00 0.00 0.00 4.85
244 245 1.672030 CGTTGCATGACCTCCAGCA 60.672 57.895 0.00 0.00 34.79 4.41
245 246 1.642037 CGTTGCATGACCTCCAGCAG 61.642 60.000 0.00 0.00 38.35 4.24
254 255 3.333219 CTCCAGCAGGAAGGCCCA 61.333 66.667 0.00 0.00 45.19 5.36
255 256 2.858476 TCCAGCAGGAAGGCCCAA 60.858 61.111 0.00 0.00 42.23 4.12
256 257 2.220786 CTCCAGCAGGAAGGCCCAAT 62.221 60.000 0.00 0.00 45.19 3.16
257 258 1.305549 CCAGCAGGAAGGCCCAATT 60.306 57.895 0.00 0.00 36.89 2.32
258 259 1.610554 CCAGCAGGAAGGCCCAATTG 61.611 60.000 0.00 0.00 36.89 2.32
259 260 0.612732 CAGCAGGAAGGCCCAATTGA 60.613 55.000 7.12 0.00 37.41 2.57
260 261 0.613012 AGCAGGAAGGCCCAATTGAC 60.613 55.000 7.12 0.00 37.41 3.18
261 262 1.937546 GCAGGAAGGCCCAATTGACG 61.938 60.000 7.12 0.00 37.41 4.35
262 263 1.000896 AGGAAGGCCCAATTGACGG 60.001 57.895 7.12 1.25 37.41 4.79
263 264 1.001393 GGAAGGCCCAATTGACGGA 60.001 57.895 7.12 0.00 34.14 4.69
264 265 1.032114 GGAAGGCCCAATTGACGGAG 61.032 60.000 7.12 0.00 34.14 4.63
265 266 3.676668 GGAAGGCCCAATTGACGGAGT 62.677 57.143 7.12 0.00 38.28 3.85
275 276 4.990288 GACGGAGTCGAAGGCTTT 57.010 55.556 0.00 0.00 45.33 3.51
276 277 3.212450 GACGGAGTCGAAGGCTTTT 57.788 52.632 0.00 0.00 45.33 2.27
277 278 0.790814 GACGGAGTCGAAGGCTTTTG 59.209 55.000 0.00 0.00 45.33 2.44
278 279 0.391597 ACGGAGTCGAAGGCTTTTGA 59.608 50.000 0.00 0.00 45.33 2.69
279 280 1.202604 ACGGAGTCGAAGGCTTTTGAA 60.203 47.619 0.00 0.00 45.33 2.69
280 281 1.871039 CGGAGTCGAAGGCTTTTGAAA 59.129 47.619 0.00 0.00 45.33 2.69
281 282 2.484264 CGGAGTCGAAGGCTTTTGAAAT 59.516 45.455 0.00 0.00 45.33 2.17
282 283 3.667960 CGGAGTCGAAGGCTTTTGAAATG 60.668 47.826 0.00 0.00 45.33 2.32
283 284 3.253432 GGAGTCGAAGGCTTTTGAAATGT 59.747 43.478 0.00 0.00 45.33 2.71
284 285 4.467735 GAGTCGAAGGCTTTTGAAATGTC 58.532 43.478 0.00 0.00 45.33 3.06
285 286 3.253432 AGTCGAAGGCTTTTGAAATGTCC 59.747 43.478 0.00 0.00 45.33 4.02
286 287 3.004315 GTCGAAGGCTTTTGAAATGTCCA 59.996 43.478 0.00 0.00 0.00 4.02
287 288 3.253188 TCGAAGGCTTTTGAAATGTCCAG 59.747 43.478 0.00 0.00 0.00 3.86
288 289 3.320626 GAAGGCTTTTGAAATGTCCAGC 58.679 45.455 0.00 0.12 0.00 4.85
289 290 2.601905 AGGCTTTTGAAATGTCCAGCT 58.398 42.857 0.00 0.00 0.00 4.24
290 291 2.967887 AGGCTTTTGAAATGTCCAGCTT 59.032 40.909 0.00 0.00 0.00 3.74
291 292 3.062042 GGCTTTTGAAATGTCCAGCTTG 58.938 45.455 0.00 0.00 0.00 4.01
292 293 3.243839 GGCTTTTGAAATGTCCAGCTTGA 60.244 43.478 0.00 0.00 0.00 3.02
293 294 3.985925 GCTTTTGAAATGTCCAGCTTGAG 59.014 43.478 0.00 0.00 0.00 3.02
294 295 4.553323 CTTTTGAAATGTCCAGCTTGAGG 58.447 43.478 0.00 0.00 0.00 3.86
295 296 3.507162 TTGAAATGTCCAGCTTGAGGA 57.493 42.857 0.00 0.00 0.00 3.71
296 297 3.507162 TGAAATGTCCAGCTTGAGGAA 57.493 42.857 0.00 0.00 36.80 3.36
297 298 3.415212 TGAAATGTCCAGCTTGAGGAAG 58.585 45.455 0.00 0.00 36.80 3.46
298 299 2.503895 AATGTCCAGCTTGAGGAAGG 57.496 50.000 0.00 0.00 36.80 3.46
299 300 0.034670 ATGTCCAGCTTGAGGAAGGC 60.035 55.000 0.00 0.00 36.80 4.35
300 301 1.130054 TGTCCAGCTTGAGGAAGGCT 61.130 55.000 0.00 0.00 36.80 4.58
301 302 0.037447 GTCCAGCTTGAGGAAGGCTT 59.963 55.000 0.00 0.00 36.80 4.35
302 303 0.773644 TCCAGCTTGAGGAAGGCTTT 59.226 50.000 0.00 0.00 33.74 3.51
303 304 1.145738 TCCAGCTTGAGGAAGGCTTTT 59.854 47.619 0.00 0.00 33.74 2.27
304 305 1.271656 CCAGCTTGAGGAAGGCTTTTG 59.728 52.381 0.00 0.00 33.74 2.44
305 306 1.271656 CAGCTTGAGGAAGGCTTTTGG 59.728 52.381 0.00 0.00 33.74 3.28
306 307 0.037882 GCTTGAGGAAGGCTTTTGGC 60.038 55.000 0.00 0.00 46.43 4.52
328 329 5.084055 GCGTTGCATGACATCATACATATG 58.916 41.667 0.00 0.00 34.26 1.78
363 364 3.806316 AGCCGTCAAAACTACATTTCG 57.194 42.857 0.00 0.00 0.00 3.46
407 411 3.551846 TCTTTTGTGAACCAGAAGGGAC 58.448 45.455 0.00 0.00 41.15 4.46
430 434 5.105473 ACCAAATTCAGAGGCATCAAAGATG 60.105 40.000 0.00 2.71 0.00 2.90
443 447 3.955471 TCAAAGATGGAAGGGTTGCTAG 58.045 45.455 0.00 0.00 0.00 3.42
444 448 3.587061 TCAAAGATGGAAGGGTTGCTAGA 59.413 43.478 0.00 0.00 0.00 2.43
448 452 4.998051 AGATGGAAGGGTTGCTAGAAAAA 58.002 39.130 0.00 0.00 0.00 1.94
493 498 6.506500 TTTCTAGAAAATCGGTCGTCTAGT 57.493 37.500 15.57 0.00 40.24 2.57
519 595 6.662414 TTCATCGTCAAAATACATCTGACC 57.338 37.500 0.00 0.00 36.87 4.02
520 596 5.116180 TCATCGTCAAAATACATCTGACCC 58.884 41.667 0.00 0.00 36.87 4.46
521 597 4.545208 TCGTCAAAATACATCTGACCCA 57.455 40.909 0.00 0.00 36.87 4.51
645 721 2.452937 GGCAGTCCCCATCTACCCC 61.453 68.421 0.00 0.00 0.00 4.95
696 776 0.034337 TTGGTTCCTGAGGTACGTGC 59.966 55.000 0.00 0.00 0.00 5.34
718 798 0.320247 GCTTCTCGGCATCGATCCAT 60.320 55.000 0.00 0.00 45.04 3.41
723 803 3.849911 TCTCGGCATCGATCCATTTATC 58.150 45.455 0.00 0.00 45.04 1.75
746 826 5.705441 TCAATCAACCAATCCAGTCAGTTAC 59.295 40.000 0.00 0.00 0.00 2.50
759 839 4.389077 CAGTCAGTTACCTTCCACGAATTC 59.611 45.833 0.00 0.00 0.00 2.17
761 841 4.626172 GTCAGTTACCTTCCACGAATTCTC 59.374 45.833 3.52 0.00 0.00 2.87
796 877 5.694006 CACCATCTAGACGAGATCCAATTTC 59.306 44.000 0.00 0.00 43.52 2.17
816 897 1.202143 CGGCAGCGAATTCCCTTTTAC 60.202 52.381 0.00 0.00 0.00 2.01
868 949 3.833442 CGAATTCCCCTTTGTTTAGCAC 58.167 45.455 0.00 0.00 0.00 4.40
869 950 3.506067 CGAATTCCCCTTTGTTTAGCACT 59.494 43.478 0.00 0.00 0.00 4.40
870 951 4.615912 CGAATTCCCCTTTGTTTAGCACTG 60.616 45.833 0.00 0.00 0.00 3.66
871 952 3.586470 TTCCCCTTTGTTTAGCACTGA 57.414 42.857 0.00 0.00 0.00 3.41
872 953 3.806949 TCCCCTTTGTTTAGCACTGAT 57.193 42.857 0.00 0.00 0.00 2.90
873 954 4.919774 TCCCCTTTGTTTAGCACTGATA 57.080 40.909 0.00 0.00 0.00 2.15
874 955 5.249780 TCCCCTTTGTTTAGCACTGATAA 57.750 39.130 0.00 0.00 0.00 1.75
875 956 5.007682 TCCCCTTTGTTTAGCACTGATAAC 58.992 41.667 0.00 0.00 0.00 1.89
876 957 5.010282 CCCCTTTGTTTAGCACTGATAACT 58.990 41.667 0.00 0.00 0.00 2.24
877 958 5.106157 CCCCTTTGTTTAGCACTGATAACTG 60.106 44.000 0.00 0.00 0.00 3.16
878 959 5.705441 CCCTTTGTTTAGCACTGATAACTGA 59.295 40.000 0.00 0.00 0.00 3.41
879 960 6.375455 CCCTTTGTTTAGCACTGATAACTGAT 59.625 38.462 0.00 0.00 0.00 2.90
880 961 7.552687 CCCTTTGTTTAGCACTGATAACTGATA 59.447 37.037 0.00 0.00 0.00 2.15
881 962 8.607459 CCTTTGTTTAGCACTGATAACTGATAG 58.393 37.037 0.00 0.00 0.00 2.08
882 963 9.371136 CTTTGTTTAGCACTGATAACTGATAGA 57.629 33.333 0.00 0.00 0.00 1.98
883 964 9.890629 TTTGTTTAGCACTGATAACTGATAGAT 57.109 29.630 0.00 0.00 0.00 1.98
885 966 9.967346 TGTTTAGCACTGATAACTGATAGATAC 57.033 33.333 0.00 0.00 0.00 2.24
889 970 8.243961 AGCACTGATAACTGATAGATACTTGT 57.756 34.615 0.00 0.00 0.00 3.16
890 971 9.355916 AGCACTGATAACTGATAGATACTTGTA 57.644 33.333 0.00 0.00 0.00 2.41
891 972 9.619316 GCACTGATAACTGATAGATACTTGTAG 57.381 37.037 0.00 0.00 0.00 2.74
902 983 9.035890 TGATAGATACTTGTAGATATGTTGGGG 57.964 37.037 0.00 0.00 0.00 4.96
903 984 9.256228 GATAGATACTTGTAGATATGTTGGGGA 57.744 37.037 0.00 0.00 0.00 4.81
904 985 7.931015 AGATACTTGTAGATATGTTGGGGAA 57.069 36.000 0.00 0.00 0.00 3.97
905 986 8.511748 AGATACTTGTAGATATGTTGGGGAAT 57.488 34.615 0.00 0.00 0.00 3.01
906 987 8.949421 AGATACTTGTAGATATGTTGGGGAATT 58.051 33.333 0.00 0.00 0.00 2.17
907 988 9.574516 GATACTTGTAGATATGTTGGGGAATTT 57.425 33.333 0.00 0.00 0.00 1.82
908 989 7.881775 ACTTGTAGATATGTTGGGGAATTTC 57.118 36.000 0.00 0.00 0.00 2.17
909 990 6.542370 ACTTGTAGATATGTTGGGGAATTTCG 59.458 38.462 0.00 0.00 0.00 3.46
910 991 5.373222 TGTAGATATGTTGGGGAATTTCGG 58.627 41.667 0.00 0.00 0.00 4.30
911 992 4.519906 AGATATGTTGGGGAATTTCGGT 57.480 40.909 0.00 0.00 0.00 4.69
912 993 4.207165 AGATATGTTGGGGAATTTCGGTG 58.793 43.478 0.00 0.00 0.00 4.94
913 994 1.555967 ATGTTGGGGAATTTCGGTGG 58.444 50.000 0.00 0.00 0.00 4.61
914 995 0.540830 TGTTGGGGAATTTCGGTGGG 60.541 55.000 0.00 0.00 0.00 4.61
915 996 0.251430 GTTGGGGAATTTCGGTGGGA 60.251 55.000 0.00 0.00 0.00 4.37
916 997 0.483328 TTGGGGAATTTCGGTGGGAA 59.517 50.000 0.00 0.00 0.00 3.97
917 998 0.039035 TGGGGAATTTCGGTGGGAAG 59.961 55.000 0.00 0.00 35.70 3.46
918 999 1.320344 GGGGAATTTCGGTGGGAAGC 61.320 60.000 0.00 0.00 35.70 3.86
919 1000 1.320344 GGGAATTTCGGTGGGAAGCC 61.320 60.000 0.00 0.00 35.70 4.35
920 1001 0.610785 GGAATTTCGGTGGGAAGCCA 60.611 55.000 0.00 0.00 35.70 4.75
921 1002 1.474330 GAATTTCGGTGGGAAGCCAT 58.526 50.000 0.00 0.00 35.70 4.40
922 1003 1.134946 GAATTTCGGTGGGAAGCCATG 59.865 52.381 0.00 0.00 35.70 3.66
923 1004 0.684153 ATTTCGGTGGGAAGCCATGG 60.684 55.000 7.63 7.63 35.70 3.66
924 1005 1.784301 TTTCGGTGGGAAGCCATGGA 61.784 55.000 18.40 0.00 35.70 3.41
925 1006 1.570857 TTCGGTGGGAAGCCATGGAT 61.571 55.000 18.40 6.18 0.00 3.41
926 1007 1.526917 CGGTGGGAAGCCATGGATC 60.527 63.158 18.40 12.75 0.00 3.36
936 1062 3.436577 AGCCATGGATCCTGATTGATC 57.563 47.619 18.40 0.00 40.37 2.92
944 1070 2.425143 TCCTGATTGATCCCTGTTGC 57.575 50.000 0.00 0.00 0.00 4.17
984 1110 1.623811 ACTGGTCTGCGTTCTTGGTAT 59.376 47.619 0.00 0.00 0.00 2.73
1450 1621 3.260483 GCTGCCTGCTCGTCGATG 61.260 66.667 0.00 0.00 38.95 3.84
1480 1651 3.151958 ATCGACGGGGAGATTGGCG 62.152 63.158 0.00 0.00 0.00 5.69
1527 1698 0.872388 ACGTCGATTTGGTTTCTGGC 59.128 50.000 0.00 0.00 0.00 4.85
1632 1806 4.996122 CCAGGAATGCAGATGAGAACTATC 59.004 45.833 0.00 0.00 0.00 2.08
1722 1896 2.440247 GGGGGTGCGAAATCTGGG 60.440 66.667 0.00 0.00 0.00 4.45
1723 1897 3.140814 GGGGTGCGAAATCTGGGC 61.141 66.667 0.00 0.00 0.00 5.36
1811 1985 5.546621 AAGCAGTGAAGGTTAGTGTCTTA 57.453 39.130 0.00 0.00 0.00 2.10
1873 2047 7.121315 GCAAGACCAGTCTAGGACAATAATTTT 59.879 37.037 0.00 0.00 39.39 1.82
1916 2110 8.437360 TGTATATGCAAACTCATGAGTAAAGG 57.563 34.615 28.10 17.64 41.58 3.11
1917 2111 6.949352 ATATGCAAACTCATGAGTAAAGGG 57.051 37.500 28.10 16.03 41.58 3.95
1919 2113 2.819608 GCAAACTCATGAGTAAAGGGCA 59.180 45.455 28.10 0.00 41.58 5.36
1921 2115 4.326826 CAAACTCATGAGTAAAGGGCAGA 58.673 43.478 28.10 0.00 41.58 4.26
1923 2117 5.957771 AACTCATGAGTAAAGGGCAGATA 57.042 39.130 28.10 0.00 41.58 1.98
1924 2118 5.283457 ACTCATGAGTAAAGGGCAGATAC 57.717 43.478 26.87 0.00 40.43 2.24
1925 2119 4.965532 ACTCATGAGTAAAGGGCAGATACT 59.034 41.667 26.87 0.00 40.43 2.12
1927 2121 5.674525 TCATGAGTAAAGGGCAGATACTTG 58.325 41.667 0.00 0.00 30.33 3.16
1928 2122 3.873910 TGAGTAAAGGGCAGATACTTGC 58.126 45.455 0.00 0.00 43.34 4.01
1929 2123 3.519510 TGAGTAAAGGGCAGATACTTGCT 59.480 43.478 0.00 0.00 43.57 3.91
1930 2124 3.873952 GAGTAAAGGGCAGATACTTGCTG 59.126 47.826 0.00 0.00 43.57 4.41
1932 2126 2.887151 AAGGGCAGATACTTGCTGTT 57.113 45.000 0.00 0.00 43.57 3.16
1933 2127 4.301072 AAAGGGCAGATACTTGCTGTTA 57.699 40.909 0.00 0.00 43.57 2.41
1937 2131 5.615289 AGGGCAGATACTTGCTGTTAATAG 58.385 41.667 0.00 0.00 43.57 1.73
1939 2133 6.326583 AGGGCAGATACTTGCTGTTAATAGTA 59.673 38.462 0.90 0.00 43.57 1.82
1940 2134 6.647067 GGGCAGATACTTGCTGTTAATAGTAG 59.353 42.308 0.90 2.27 43.57 2.57
1943 2141 7.921214 GCAGATACTTGCTGTTAATAGTAGTCA 59.079 37.037 10.71 0.00 40.89 3.41
1948 2146 6.758886 ACTTGCTGTTAATAGTAGTCATCTGC 59.241 38.462 0.90 0.00 0.00 4.26
1952 2150 8.138074 TGCTGTTAATAGTAGTCATCTGCTAAG 58.862 37.037 0.90 0.00 40.94 2.18
1963 2161 4.098654 GTCATCTGCTAAGAGCTTACCTCA 59.901 45.833 0.00 0.00 42.97 3.86
1967 2165 6.054860 TCTGCTAAGAGCTTACCTCAATTT 57.945 37.500 0.00 0.00 42.97 1.82
1969 2167 6.942576 TCTGCTAAGAGCTTACCTCAATTTTT 59.057 34.615 0.00 0.00 42.97 1.94
1970 2168 6.913170 TGCTAAGAGCTTACCTCAATTTTTG 58.087 36.000 0.00 0.00 42.97 2.44
1971 2169 6.490040 TGCTAAGAGCTTACCTCAATTTTTGT 59.510 34.615 0.00 0.00 42.97 2.83
1972 2170 6.803807 GCTAAGAGCTTACCTCAATTTTTGTG 59.196 38.462 0.00 0.00 43.31 3.33
1973 2171 6.715347 AAGAGCTTACCTCAATTTTTGTGT 57.285 33.333 0.00 0.00 43.31 3.72
1974 2172 6.319141 AGAGCTTACCTCAATTTTTGTGTC 57.681 37.500 0.00 0.00 43.31 3.67
1975 2173 6.064717 AGAGCTTACCTCAATTTTTGTGTCT 58.935 36.000 0.00 0.00 43.31 3.41
1976 2174 6.547510 AGAGCTTACCTCAATTTTTGTGTCTT 59.452 34.615 0.00 0.00 43.31 3.01
2017 2215 7.873719 TTTAGTGACTTGGAATCTTGTTTGA 57.126 32.000 0.00 0.00 0.00 2.69
2018 2216 5.757850 AGTGACTTGGAATCTTGTTTGAC 57.242 39.130 0.00 0.00 0.00 3.18
2019 2217 5.440610 AGTGACTTGGAATCTTGTTTGACT 58.559 37.500 0.00 0.00 0.00 3.41
2021 2219 4.580167 TGACTTGGAATCTTGTTTGACTGG 59.420 41.667 0.00 0.00 0.00 4.00
2022 2220 4.792068 ACTTGGAATCTTGTTTGACTGGA 58.208 39.130 0.00 0.00 0.00 3.86
2023 2221 4.580580 ACTTGGAATCTTGTTTGACTGGAC 59.419 41.667 0.00 0.00 0.00 4.02
2024 2222 4.163441 TGGAATCTTGTTTGACTGGACA 57.837 40.909 0.00 0.00 0.00 4.02
2025 2223 4.728772 TGGAATCTTGTTTGACTGGACAT 58.271 39.130 0.00 0.00 0.00 3.06
2026 2224 5.875224 TGGAATCTTGTTTGACTGGACATA 58.125 37.500 0.00 0.00 0.00 2.29
2027 2225 6.484288 TGGAATCTTGTTTGACTGGACATAT 58.516 36.000 0.00 0.00 0.00 1.78
2028 2226 6.947733 TGGAATCTTGTTTGACTGGACATATT 59.052 34.615 0.00 0.00 0.00 1.28
2029 2227 7.121168 TGGAATCTTGTTTGACTGGACATATTC 59.879 37.037 0.00 0.00 32.90 1.75
2030 2228 7.121168 GGAATCTTGTTTGACTGGACATATTCA 59.879 37.037 0.00 0.00 34.04 2.57
2031 2229 8.408043 AATCTTGTTTGACTGGACATATTCAA 57.592 30.769 0.00 0.00 0.00 2.69
2032 2230 7.815840 TCTTGTTTGACTGGACATATTCAAA 57.184 32.000 0.00 0.00 35.98 2.69
2033 2231 7.874940 TCTTGTTTGACTGGACATATTCAAAG 58.125 34.615 0.00 0.00 38.35 2.77
2034 2232 7.502226 TCTTGTTTGACTGGACATATTCAAAGT 59.498 33.333 0.00 0.00 38.35 2.66
2035 2233 6.969366 TGTTTGACTGGACATATTCAAAGTG 58.031 36.000 0.00 0.00 38.35 3.16
2036 2234 6.545666 TGTTTGACTGGACATATTCAAAGTGT 59.454 34.615 0.00 0.00 38.35 3.55
2037 2235 6.558771 TTGACTGGACATATTCAAAGTGTG 57.441 37.500 0.00 0.00 0.00 3.82
2039 2237 5.934043 TGACTGGACATATTCAAAGTGTGAG 59.066 40.000 0.00 0.00 37.61 3.51
2040 2238 5.869579 ACTGGACATATTCAAAGTGTGAGT 58.130 37.500 0.00 0.00 37.61 3.41
2041 2239 7.004555 ACTGGACATATTCAAAGTGTGAGTA 57.995 36.000 0.00 0.00 37.61 2.59
2043 2241 7.387948 ACTGGACATATTCAAAGTGTGAGTAAC 59.612 37.037 0.00 0.00 37.61 2.50
2046 2264 8.730680 GGACATATTCAAAGTGTGAGTAACAAT 58.269 33.333 0.00 0.00 41.57 2.71
2123 2342 4.450757 TCACAATGTAATTCCTGTGTCGTG 59.549 41.667 0.00 0.00 31.22 4.35
2129 2661 0.034896 ATTCCTGTGTCGTGGTCCAC 59.965 55.000 12.40 12.40 0.00 4.02
2130 2662 1.331399 TTCCTGTGTCGTGGTCCACA 61.331 55.000 21.91 6.45 39.16 4.17
2131 2663 1.145156 CCTGTGTCGTGGTCCACAA 59.855 57.895 21.91 0.00 40.77 3.33
2147 2679 7.174253 GTGGTCCACAATTGAAACTATGAGTTA 59.826 37.037 17.59 0.00 34.14 2.24
2162 2694 9.614792 AACTATGAGTTATTACAAGGTGATTCC 57.385 33.333 0.00 0.00 36.52 3.01
2200 2951 6.183360 GCAAGTAGTGATTGCCAGTTTATCAT 60.183 38.462 0.00 0.00 45.79 2.45
2238 2989 1.588824 ATGATGTGTGGCCTGTTGCG 61.589 55.000 3.32 0.00 42.61 4.85
2282 3033 9.914131 GCCTTTCACTAGTATTGATTTTCTTTT 57.086 29.630 0.00 0.00 0.00 2.27
2331 3088 5.359576 TGAACATTGCTTTAGTTCCAGTGTT 59.640 36.000 0.00 0.00 40.54 3.32
2332 3089 6.544197 TGAACATTGCTTTAGTTCCAGTGTTA 59.456 34.615 0.00 0.00 38.81 2.41
2333 3090 6.560253 ACATTGCTTTAGTTCCAGTGTTAG 57.440 37.500 0.00 0.00 0.00 2.34
2334 3091 6.062095 ACATTGCTTTAGTTCCAGTGTTAGT 58.938 36.000 0.00 0.00 0.00 2.24
2335 3092 6.017109 ACATTGCTTTAGTTCCAGTGTTAGTG 60.017 38.462 0.00 0.00 0.00 2.74
2359 3125 0.107017 ACCTGCTGTCTTGTTGCTGT 60.107 50.000 0.00 0.00 0.00 4.40
2360 3126 0.309922 CCTGCTGTCTTGTTGCTGTG 59.690 55.000 0.00 0.00 0.00 3.66
2361 3127 1.019673 CTGCTGTCTTGTTGCTGTGT 58.980 50.000 0.00 0.00 0.00 3.72
2364 3130 1.672881 GCTGTCTTGTTGCTGTGTCTT 59.327 47.619 0.00 0.00 0.00 3.01
2370 3165 0.101040 TGTTGCTGTGTCTTTGCTGC 59.899 50.000 0.00 0.00 0.00 5.25
2373 3168 0.749091 TGCTGTGTCTTTGCTGCTGT 60.749 50.000 0.00 0.00 0.00 4.40
2377 3172 1.132834 TGTGTCTTTGCTGCTGTTGTG 59.867 47.619 0.00 0.00 0.00 3.33
2398 3193 5.366186 TGTGTCCAGTAAAGTAGTAACCCAA 59.634 40.000 0.00 0.00 0.00 4.12
2505 3309 9.277783 CTGTATAAATTGCTAGCTTCTATTGGT 57.722 33.333 17.23 5.90 0.00 3.67
2578 3422 2.875933 CGCTGAAACTTTGTTGGGTCTA 59.124 45.455 0.00 0.00 0.00 2.59
2584 3428 5.071250 TGAAACTTTGTTGGGTCTAGAGCTA 59.929 40.000 20.67 12.95 0.00 3.32
2586 3430 5.763876 ACTTTGTTGGGTCTAGAGCTATT 57.236 39.130 20.67 0.00 0.00 1.73
2588 3432 6.641474 ACTTTGTTGGGTCTAGAGCTATTAC 58.359 40.000 20.67 11.71 0.00 1.89
2602 3446 2.731976 GCTATTACGGCATTCTCCTTCG 59.268 50.000 0.00 0.00 0.00 3.79
2603 3447 2.240493 ATTACGGCATTCTCCTTCGG 57.760 50.000 0.00 0.00 0.00 4.30
2635 3481 1.761784 TGCCATTTCCAGTTTTGCTGT 59.238 42.857 0.00 0.00 43.55 4.40
2636 3482 2.224018 TGCCATTTCCAGTTTTGCTGTC 60.224 45.455 0.00 0.00 43.55 3.51
2637 3483 2.664916 CCATTTCCAGTTTTGCTGTCG 58.335 47.619 0.00 0.00 43.55 4.35
2667 3514 2.646175 CCTTGCTCCCGGTTCGAGA 61.646 63.158 10.08 0.00 0.00 4.04
2673 3520 4.430765 CCCGGTTCGAGACACCCG 62.431 72.222 0.00 1.63 40.12 5.28
2690 3537 1.539827 CCCGCTCTTACAAAAGGGTTG 59.460 52.381 0.00 0.00 35.44 3.77
2694 3541 3.609409 CGCTCTTACAAAAGGGTTGAAGC 60.609 47.826 0.00 0.00 35.44 3.86
2696 3543 2.882137 TCTTACAAAAGGGTTGAAGCGG 59.118 45.455 0.00 0.00 33.22 5.52
2697 3544 2.642154 TACAAAAGGGTTGAAGCGGA 57.358 45.000 0.00 0.00 0.00 5.54
2705 3552 0.608035 GGTTGAAGCGGAATGGACCA 60.608 55.000 0.00 0.00 0.00 4.02
2706 3553 1.463674 GTTGAAGCGGAATGGACCAT 58.536 50.000 0.00 0.00 0.00 3.55
2707 3554 1.133025 GTTGAAGCGGAATGGACCATG 59.867 52.381 8.02 0.00 0.00 3.66
2708 3555 0.617935 TGAAGCGGAATGGACCATGA 59.382 50.000 8.02 0.00 0.00 3.07
2709 3556 1.004161 TGAAGCGGAATGGACCATGAA 59.996 47.619 8.02 0.00 0.00 2.57
2710 3557 2.301346 GAAGCGGAATGGACCATGAAT 58.699 47.619 8.02 0.00 0.00 2.57
2737 3599 2.483363 CCAGAGAGCAGTCATCCATGTC 60.483 54.545 0.00 0.00 0.00 3.06
2761 3623 3.077359 GTGGCAGCCAGGATATATGTTC 58.923 50.000 16.83 0.00 32.34 3.18
2762 3624 2.710471 TGGCAGCCAGGATATATGTTCA 59.290 45.455 11.22 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.364970 CCTCAAACCCATTTGTGCAAGA 59.635 45.455 0.00 0.00 44.76 3.02
1 2 2.364970 TCCTCAAACCCATTTGTGCAAG 59.635 45.455 0.00 0.00 44.76 4.01
2 3 2.392662 TCCTCAAACCCATTTGTGCAA 58.607 42.857 0.00 0.00 44.76 4.08
3 4 2.079170 TCCTCAAACCCATTTGTGCA 57.921 45.000 0.09 0.00 44.76 4.57
4 5 2.932187 GCATCCTCAAACCCATTTGTGC 60.932 50.000 0.09 0.00 44.76 4.57
5 6 2.354003 GGCATCCTCAAACCCATTTGTG 60.354 50.000 0.09 0.00 44.76 3.33
6 7 1.901833 GGCATCCTCAAACCCATTTGT 59.098 47.619 0.09 0.00 44.76 2.83
7 8 1.135024 CGGCATCCTCAAACCCATTTG 60.135 52.381 0.00 0.00 45.67 2.32
8 9 1.185315 CGGCATCCTCAAACCCATTT 58.815 50.000 0.00 0.00 0.00 2.32
9 10 1.322538 GCGGCATCCTCAAACCCATT 61.323 55.000 0.00 0.00 0.00 3.16
10 11 1.754234 GCGGCATCCTCAAACCCAT 60.754 57.895 0.00 0.00 0.00 4.00
11 12 2.361104 GCGGCATCCTCAAACCCA 60.361 61.111 0.00 0.00 0.00 4.51
12 13 3.508840 CGCGGCATCCTCAAACCC 61.509 66.667 0.00 0.00 0.00 4.11
13 14 2.746277 ACGCGGCATCCTCAAACC 60.746 61.111 12.47 0.00 0.00 3.27
14 15 2.785258 GACGCGGCATCCTCAAAC 59.215 61.111 7.34 0.00 0.00 2.93
15 16 2.813474 CGACGCGGCATCCTCAAA 60.813 61.111 14.85 0.00 0.00 2.69
16 17 4.812476 CCGACGCGGCATCCTCAA 62.812 66.667 14.85 0.00 41.17 3.02
21 22 4.814294 ACTTCCCGACGCGGCATC 62.814 66.667 14.85 0.00 46.86 3.91
26 27 4.421479 AGCTCACTTCCCGACGCG 62.421 66.667 3.53 3.53 0.00 6.01
27 28 2.209064 TACAGCTCACTTCCCGACGC 62.209 60.000 0.00 0.00 0.00 5.19
28 29 0.179161 CTACAGCTCACTTCCCGACG 60.179 60.000 0.00 0.00 0.00 5.12
29 30 0.173708 CCTACAGCTCACTTCCCGAC 59.826 60.000 0.00 0.00 0.00 4.79
30 31 0.039180 TCCTACAGCTCACTTCCCGA 59.961 55.000 0.00 0.00 0.00 5.14
31 32 1.067821 GATCCTACAGCTCACTTCCCG 59.932 57.143 0.00 0.00 0.00 5.14
32 33 2.102252 CAGATCCTACAGCTCACTTCCC 59.898 54.545 0.00 0.00 0.00 3.97
33 34 2.763448 ACAGATCCTACAGCTCACTTCC 59.237 50.000 0.00 0.00 0.00 3.46
34 35 4.180057 CAACAGATCCTACAGCTCACTTC 58.820 47.826 0.00 0.00 0.00 3.01
35 36 3.055530 CCAACAGATCCTACAGCTCACTT 60.056 47.826 0.00 0.00 0.00 3.16
36 37 2.499289 CCAACAGATCCTACAGCTCACT 59.501 50.000 0.00 0.00 0.00 3.41
37 38 2.497675 TCCAACAGATCCTACAGCTCAC 59.502 50.000 0.00 0.00 0.00 3.51
38 39 2.762887 CTCCAACAGATCCTACAGCTCA 59.237 50.000 0.00 0.00 0.00 4.26
39 40 3.027412 TCTCCAACAGATCCTACAGCTC 58.973 50.000 0.00 0.00 0.00 4.09
40 41 3.030291 CTCTCCAACAGATCCTACAGCT 58.970 50.000 0.00 0.00 0.00 4.24
41 42 2.102252 CCTCTCCAACAGATCCTACAGC 59.898 54.545 0.00 0.00 0.00 4.40
42 43 2.697751 CCCTCTCCAACAGATCCTACAG 59.302 54.545 0.00 0.00 0.00 2.74
43 44 2.044492 ACCCTCTCCAACAGATCCTACA 59.956 50.000 0.00 0.00 0.00 2.74
44 45 2.696187 GACCCTCTCCAACAGATCCTAC 59.304 54.545 0.00 0.00 0.00 3.18
45 46 2.314852 TGACCCTCTCCAACAGATCCTA 59.685 50.000 0.00 0.00 0.00 2.94
46 47 1.079490 TGACCCTCTCCAACAGATCCT 59.921 52.381 0.00 0.00 0.00 3.24
47 48 1.573108 TGACCCTCTCCAACAGATCC 58.427 55.000 0.00 0.00 0.00 3.36
48 49 3.539604 CATTGACCCTCTCCAACAGATC 58.460 50.000 0.00 0.00 0.00 2.75
49 50 2.240667 CCATTGACCCTCTCCAACAGAT 59.759 50.000 0.00 0.00 0.00 2.90
50 51 1.630369 CCATTGACCCTCTCCAACAGA 59.370 52.381 0.00 0.00 0.00 3.41
51 52 1.952367 GCCATTGACCCTCTCCAACAG 60.952 57.143 0.00 0.00 0.00 3.16
52 53 0.038166 GCCATTGACCCTCTCCAACA 59.962 55.000 0.00 0.00 0.00 3.33
53 54 1.026718 CGCCATTGACCCTCTCCAAC 61.027 60.000 0.00 0.00 0.00 3.77
54 55 1.198094 TCGCCATTGACCCTCTCCAA 61.198 55.000 0.00 0.00 0.00 3.53
55 56 1.612146 TCGCCATTGACCCTCTCCA 60.612 57.895 0.00 0.00 0.00 3.86
56 57 1.144936 CTCGCCATTGACCCTCTCC 59.855 63.158 0.00 0.00 0.00 3.71
57 58 1.144936 CCTCGCCATTGACCCTCTC 59.855 63.158 0.00 0.00 0.00 3.20
58 59 0.692419 ATCCTCGCCATTGACCCTCT 60.692 55.000 0.00 0.00 0.00 3.69
59 60 0.533755 CATCCTCGCCATTGACCCTC 60.534 60.000 0.00 0.00 0.00 4.30
60 61 0.982852 TCATCCTCGCCATTGACCCT 60.983 55.000 0.00 0.00 0.00 4.34
61 62 0.107214 TTCATCCTCGCCATTGACCC 60.107 55.000 0.00 0.00 0.00 4.46
62 63 1.134401 TCTTCATCCTCGCCATTGACC 60.134 52.381 0.00 0.00 0.00 4.02
63 64 2.208431 CTCTTCATCCTCGCCATTGAC 58.792 52.381 0.00 0.00 0.00 3.18
64 65 1.473965 GCTCTTCATCCTCGCCATTGA 60.474 52.381 0.00 0.00 0.00 2.57
65 66 0.942962 GCTCTTCATCCTCGCCATTG 59.057 55.000 0.00 0.00 0.00 2.82
66 67 0.543277 TGCTCTTCATCCTCGCCATT 59.457 50.000 0.00 0.00 0.00 3.16
67 68 0.763652 ATGCTCTTCATCCTCGCCAT 59.236 50.000 0.00 0.00 0.00 4.40
68 69 0.105593 GATGCTCTTCATCCTCGCCA 59.894 55.000 0.00 0.00 44.54 5.69
69 70 0.943359 CGATGCTCTTCATCCTCGCC 60.943 60.000 0.00 0.00 46.93 5.54
70 71 0.943359 CCGATGCTCTTCATCCTCGC 60.943 60.000 0.00 0.00 46.93 5.03
71 72 0.670706 TCCGATGCTCTTCATCCTCG 59.329 55.000 0.00 0.00 46.93 4.63
72 73 1.959985 TCTCCGATGCTCTTCATCCTC 59.040 52.381 0.00 0.00 46.93 3.71
73 74 2.079170 TCTCCGATGCTCTTCATCCT 57.921 50.000 0.00 0.00 46.93 3.24
74 75 3.367910 GGTATCTCCGATGCTCTTCATCC 60.368 52.174 0.00 0.00 46.93 3.51
75 76 3.843999 GGTATCTCCGATGCTCTTCATC 58.156 50.000 0.00 0.00 46.32 2.92
76 77 3.951775 GGTATCTCCGATGCTCTTCAT 57.048 47.619 0.00 0.00 38.32 2.57
88 89 1.606889 AGGGCGATCCGGTATCTCC 60.607 63.158 0.00 7.80 38.55 3.71
89 90 0.894184 TCAGGGCGATCCGGTATCTC 60.894 60.000 0.00 0.00 41.52 2.75
90 91 1.153061 TCAGGGCGATCCGGTATCT 59.847 57.895 0.00 0.00 41.52 1.98
91 92 1.289380 GTCAGGGCGATCCGGTATC 59.711 63.158 0.00 2.41 41.52 2.24
92 93 2.561956 CGTCAGGGCGATCCGGTAT 61.562 63.158 0.00 0.00 41.52 2.73
93 94 3.214123 CGTCAGGGCGATCCGGTA 61.214 66.667 0.00 0.00 41.52 4.02
96 97 4.271816 CTCCGTCAGGGCGATCCG 62.272 72.222 0.00 0.00 41.52 4.18
97 98 3.917760 CCTCCGTCAGGGCGATCC 61.918 72.222 0.00 0.00 38.91 3.36
98 99 4.593864 GCCTCCGTCAGGGCGATC 62.594 72.222 0.00 0.00 43.70 3.69
103 104 3.330720 AAAGGGCCTCCGTCAGGG 61.331 66.667 6.46 0.00 43.70 4.45
104 105 2.045926 CAAAGGGCCTCCGTCAGG 60.046 66.667 6.46 0.00 46.82 3.86
105 106 2.747855 GCAAAGGGCCTCCGTCAG 60.748 66.667 6.46 0.00 38.33 3.51
106 107 2.905996 ATGCAAAGGGCCTCCGTCA 61.906 57.895 6.46 3.11 43.89 4.35
107 108 2.044946 ATGCAAAGGGCCTCCGTC 60.045 61.111 6.46 0.00 43.89 4.79
108 109 2.361610 CATGCAAAGGGCCTCCGT 60.362 61.111 6.46 0.00 43.89 4.69
109 110 2.361610 ACATGCAAAGGGCCTCCG 60.362 61.111 6.46 1.29 43.89 4.63
110 111 1.000396 AGACATGCAAAGGGCCTCC 60.000 57.895 6.46 0.00 43.89 4.30
111 112 0.322816 TCAGACATGCAAAGGGCCTC 60.323 55.000 6.46 0.00 43.89 4.70
112 113 0.112995 TTCAGACATGCAAAGGGCCT 59.887 50.000 0.00 0.00 43.89 5.19
113 114 0.244721 GTTCAGACATGCAAAGGGCC 59.755 55.000 0.00 0.00 43.89 5.80
114 115 0.961019 TGTTCAGACATGCAAAGGGC 59.039 50.000 0.00 0.00 45.13 5.19
115 116 3.087031 AGATGTTCAGACATGCAAAGGG 58.913 45.455 0.00 0.00 46.27 3.95
116 117 4.778534 AAGATGTTCAGACATGCAAAGG 57.221 40.909 0.00 0.00 46.27 3.11
117 118 5.159209 GGAAAGATGTTCAGACATGCAAAG 58.841 41.667 0.00 0.00 46.27 2.77
118 119 4.320421 CGGAAAGATGTTCAGACATGCAAA 60.320 41.667 0.00 0.00 46.27 3.68
119 120 3.189080 CGGAAAGATGTTCAGACATGCAA 59.811 43.478 0.00 0.00 46.27 4.08
120 121 2.743664 CGGAAAGATGTTCAGACATGCA 59.256 45.455 0.00 0.00 46.27 3.96
121 122 2.096496 CCGGAAAGATGTTCAGACATGC 59.904 50.000 0.00 0.00 46.27 4.06
122 123 2.679837 CCCGGAAAGATGTTCAGACATG 59.320 50.000 0.73 0.00 46.27 3.21
124 125 1.003118 CCCCGGAAAGATGTTCAGACA 59.997 52.381 0.73 0.00 40.71 3.41
125 126 1.003233 ACCCCGGAAAGATGTTCAGAC 59.997 52.381 0.73 0.00 0.00 3.51
126 127 1.358152 ACCCCGGAAAGATGTTCAGA 58.642 50.000 0.73 0.00 0.00 3.27
127 128 2.200373 AACCCCGGAAAGATGTTCAG 57.800 50.000 0.73 0.00 0.00 3.02
128 129 2.510613 GAAACCCCGGAAAGATGTTCA 58.489 47.619 0.73 0.00 0.00 3.18
129 130 1.816835 GGAAACCCCGGAAAGATGTTC 59.183 52.381 0.73 0.00 0.00 3.18
130 131 1.919240 GGAAACCCCGGAAAGATGTT 58.081 50.000 0.73 0.00 0.00 2.71
131 132 3.664240 GGAAACCCCGGAAAGATGT 57.336 52.632 0.73 0.00 0.00 3.06
141 142 0.891904 TGCTGCTTAACGGAAACCCC 60.892 55.000 0.00 0.00 0.00 4.95
142 143 0.240145 GTGCTGCTTAACGGAAACCC 59.760 55.000 0.00 0.00 0.00 4.11
143 144 1.197036 GAGTGCTGCTTAACGGAAACC 59.803 52.381 0.00 0.00 0.00 3.27
144 145 2.143925 AGAGTGCTGCTTAACGGAAAC 58.856 47.619 0.00 0.00 0.00 2.78
145 146 2.543777 AGAGTGCTGCTTAACGGAAA 57.456 45.000 0.00 0.00 0.00 3.13
146 147 2.143122 CAAGAGTGCTGCTTAACGGAA 58.857 47.619 0.00 0.00 0.00 4.30
147 148 1.343142 TCAAGAGTGCTGCTTAACGGA 59.657 47.619 0.00 0.00 0.00 4.69
148 149 1.795768 TCAAGAGTGCTGCTTAACGG 58.204 50.000 0.00 0.00 0.00 4.44
149 150 3.059884 TCTTCAAGAGTGCTGCTTAACG 58.940 45.455 0.00 0.00 0.00 3.18
150 151 4.752101 TCTTCTTCAAGAGTGCTGCTTAAC 59.248 41.667 0.00 0.00 33.38 2.01
151 152 4.960938 TCTTCTTCAAGAGTGCTGCTTAA 58.039 39.130 0.00 0.00 33.38 1.85
152 153 4.607293 TCTTCTTCAAGAGTGCTGCTTA 57.393 40.909 0.00 0.00 33.38 3.09
153 154 3.482156 TCTTCTTCAAGAGTGCTGCTT 57.518 42.857 0.00 0.00 33.38 3.91
162 163 3.580458 CCCTGTCTTCCTCTTCTTCAAGA 59.420 47.826 0.00 0.00 37.11 3.02
163 164 3.580458 TCCCTGTCTTCCTCTTCTTCAAG 59.420 47.826 0.00 0.00 0.00 3.02
164 165 3.580458 CTCCCTGTCTTCCTCTTCTTCAA 59.420 47.826 0.00 0.00 0.00 2.69
165 166 3.169099 CTCCCTGTCTTCCTCTTCTTCA 58.831 50.000 0.00 0.00 0.00 3.02
166 167 3.436243 TCTCCCTGTCTTCCTCTTCTTC 58.564 50.000 0.00 0.00 0.00 2.87
167 168 3.076785 TCTCTCCCTGTCTTCCTCTTCTT 59.923 47.826 0.00 0.00 0.00 2.52
168 169 2.652348 TCTCTCCCTGTCTTCCTCTTCT 59.348 50.000 0.00 0.00 0.00 2.85
169 170 2.758423 GTCTCTCCCTGTCTTCCTCTTC 59.242 54.545 0.00 0.00 0.00 2.87
170 171 2.110899 TGTCTCTCCCTGTCTTCCTCTT 59.889 50.000 0.00 0.00 0.00 2.85
171 172 1.713647 TGTCTCTCCCTGTCTTCCTCT 59.286 52.381 0.00 0.00 0.00 3.69
172 173 2.223803 TGTCTCTCCCTGTCTTCCTC 57.776 55.000 0.00 0.00 0.00 3.71
173 174 2.938428 ATGTCTCTCCCTGTCTTCCT 57.062 50.000 0.00 0.00 0.00 3.36
174 175 3.576550 GGATATGTCTCTCCCTGTCTTCC 59.423 52.174 0.00 0.00 0.00 3.46
175 176 4.219115 TGGATATGTCTCTCCCTGTCTTC 58.781 47.826 0.00 0.00 0.00 2.87
176 177 4.222336 CTGGATATGTCTCTCCCTGTCTT 58.778 47.826 0.00 0.00 0.00 3.01
177 178 3.206412 ACTGGATATGTCTCTCCCTGTCT 59.794 47.826 0.00 0.00 0.00 3.41
178 179 3.571590 ACTGGATATGTCTCTCCCTGTC 58.428 50.000 0.00 0.00 0.00 3.51
179 180 3.206412 AGACTGGATATGTCTCTCCCTGT 59.794 47.826 0.00 0.00 40.35 4.00
180 181 3.843422 AGACTGGATATGTCTCTCCCTG 58.157 50.000 0.00 0.00 40.35 4.45
187 188 1.683917 GTGGCGAGACTGGATATGTCT 59.316 52.381 0.00 0.00 46.17 3.41
188 189 1.269831 GGTGGCGAGACTGGATATGTC 60.270 57.143 0.00 0.00 34.88 3.06
189 190 0.753262 GGTGGCGAGACTGGATATGT 59.247 55.000 0.00 0.00 0.00 2.29
190 191 0.319040 CGGTGGCGAGACTGGATATG 60.319 60.000 0.00 0.00 0.00 1.78
191 192 2.041976 CGGTGGCGAGACTGGATAT 58.958 57.895 0.00 0.00 0.00 1.63
192 193 2.782222 GCGGTGGCGAGACTGGATA 61.782 63.158 0.00 0.00 0.00 2.59
193 194 4.148825 GCGGTGGCGAGACTGGAT 62.149 66.667 0.00 0.00 0.00 3.41
204 205 2.573340 GATTTTGGGCAGCGGTGG 59.427 61.111 17.54 0.00 0.00 4.61
205 206 2.179018 CGATTTTGGGCAGCGGTG 59.821 61.111 10.98 10.98 0.00 4.94
206 207 2.033448 TCGATTTTGGGCAGCGGT 59.967 55.556 0.00 0.00 0.00 5.68
207 208 2.764314 CCTCGATTTTGGGCAGCGG 61.764 63.158 0.00 0.00 0.00 5.52
208 209 2.793946 CCTCGATTTTGGGCAGCG 59.206 61.111 0.00 0.00 0.00 5.18
209 210 2.491621 GCCTCGATTTTGGGCAGC 59.508 61.111 7.70 0.00 44.69 5.25
210 211 1.586154 AACGCCTCGATTTTGGGCAG 61.586 55.000 12.53 7.84 45.50 4.85
211 212 1.602323 AACGCCTCGATTTTGGGCA 60.602 52.632 12.53 0.00 45.50 5.36
212 213 1.154035 CAACGCCTCGATTTTGGGC 60.154 57.895 2.62 2.62 42.18 5.36
213 214 1.154035 GCAACGCCTCGATTTTGGG 60.154 57.895 0.00 0.00 0.00 4.12
214 215 0.171007 ATGCAACGCCTCGATTTTGG 59.829 50.000 0.00 0.00 0.00 3.28
215 216 1.135717 TCATGCAACGCCTCGATTTTG 60.136 47.619 0.00 0.00 0.00 2.44
216 217 1.135689 GTCATGCAACGCCTCGATTTT 60.136 47.619 0.00 0.00 0.00 1.82
217 218 0.447801 GTCATGCAACGCCTCGATTT 59.552 50.000 0.00 0.00 0.00 2.17
218 219 1.369091 GGTCATGCAACGCCTCGATT 61.369 55.000 0.00 0.00 0.00 3.34
219 220 1.815421 GGTCATGCAACGCCTCGAT 60.815 57.895 0.00 0.00 0.00 3.59
220 221 2.434185 GGTCATGCAACGCCTCGA 60.434 61.111 0.00 0.00 0.00 4.04
221 222 2.434884 AGGTCATGCAACGCCTCG 60.435 61.111 0.00 0.00 0.00 4.63
222 223 2.109126 GGAGGTCATGCAACGCCTC 61.109 63.158 19.44 19.44 44.93 4.70
223 224 2.045926 GGAGGTCATGCAACGCCT 60.046 61.111 6.08 6.08 0.00 5.52
224 225 2.359850 TGGAGGTCATGCAACGCC 60.360 61.111 0.00 0.00 0.00 5.68
225 226 3.044059 GCTGGAGGTCATGCAACGC 62.044 63.158 0.00 0.00 0.00 4.84
226 227 1.642037 CTGCTGGAGGTCATGCAACG 61.642 60.000 0.00 0.00 34.90 4.10
227 228 1.310933 CCTGCTGGAGGTCATGCAAC 61.311 60.000 7.11 0.00 37.02 4.17
228 229 1.001764 CCTGCTGGAGGTCATGCAA 60.002 57.895 7.11 0.00 37.02 4.08
229 230 1.491274 TTCCTGCTGGAGGTCATGCA 61.491 55.000 15.24 0.00 44.24 3.96
230 231 0.747283 CTTCCTGCTGGAGGTCATGC 60.747 60.000 15.24 0.00 44.24 4.06
231 232 0.107312 CCTTCCTGCTGGAGGTCATG 60.107 60.000 18.52 4.22 44.24 3.07
232 233 1.919600 GCCTTCCTGCTGGAGGTCAT 61.920 60.000 18.52 0.00 44.24 3.06
233 234 2.596851 GCCTTCCTGCTGGAGGTCA 61.597 63.158 18.52 2.61 44.24 4.02
234 235 2.270527 GCCTTCCTGCTGGAGGTC 59.729 66.667 18.52 4.08 44.24 3.85
235 236 3.334054 GGCCTTCCTGCTGGAGGT 61.334 66.667 18.52 0.00 44.24 3.85
236 237 4.120755 GGGCCTTCCTGCTGGAGG 62.121 72.222 14.05 14.05 44.24 4.30
237 238 2.220786 ATTGGGCCTTCCTGCTGGAG 62.221 60.000 12.54 3.55 44.24 3.86
238 239 1.803453 AATTGGGCCTTCCTGCTGGA 61.803 55.000 8.48 8.48 41.36 3.86
239 240 1.305549 AATTGGGCCTTCCTGCTGG 60.306 57.895 4.53 2.58 36.20 4.85
240 241 0.612732 TCAATTGGGCCTTCCTGCTG 60.613 55.000 4.53 0.00 36.20 4.41
241 242 0.613012 GTCAATTGGGCCTTCCTGCT 60.613 55.000 4.53 0.00 36.20 4.24
242 243 1.893062 GTCAATTGGGCCTTCCTGC 59.107 57.895 4.53 0.00 36.20 4.85
243 244 1.315257 CCGTCAATTGGGCCTTCCTG 61.315 60.000 4.53 0.00 36.20 3.86
244 245 1.000896 CCGTCAATTGGGCCTTCCT 60.001 57.895 4.53 0.00 36.20 3.36
245 246 1.001393 TCCGTCAATTGGGCCTTCC 60.001 57.895 4.53 0.00 0.00 3.46
246 247 0.322546 ACTCCGTCAATTGGGCCTTC 60.323 55.000 4.53 0.00 0.00 3.46
247 248 0.322546 GACTCCGTCAATTGGGCCTT 60.323 55.000 4.53 0.00 32.09 4.35
248 249 1.299976 GACTCCGTCAATTGGGCCT 59.700 57.895 4.53 0.00 32.09 5.19
249 250 2.106683 CGACTCCGTCAATTGGGCC 61.107 63.158 5.42 0.00 32.09 5.80
250 251 0.672401 TTCGACTCCGTCAATTGGGC 60.672 55.000 5.42 0.00 37.05 5.36
251 252 1.359848 CTTCGACTCCGTCAATTGGG 58.640 55.000 5.42 0.00 37.05 4.12
252 253 1.359848 CCTTCGACTCCGTCAATTGG 58.640 55.000 5.42 0.00 37.05 3.16
253 254 0.721718 GCCTTCGACTCCGTCAATTG 59.278 55.000 0.00 0.00 37.05 2.32
254 255 0.608640 AGCCTTCGACTCCGTCAATT 59.391 50.000 0.00 0.00 37.05 2.32
255 256 0.608640 AAGCCTTCGACTCCGTCAAT 59.391 50.000 0.00 0.00 37.05 2.57
256 257 0.391597 AAAGCCTTCGACTCCGTCAA 59.608 50.000 0.00 0.00 37.05 3.18
257 258 0.391597 AAAAGCCTTCGACTCCGTCA 59.608 50.000 0.00 0.00 37.05 4.35
258 259 0.790814 CAAAAGCCTTCGACTCCGTC 59.209 55.000 0.00 0.00 37.05 4.79
259 260 0.391597 TCAAAAGCCTTCGACTCCGT 59.608 50.000 0.00 0.00 37.05 4.69
260 261 1.508632 TTCAAAAGCCTTCGACTCCG 58.491 50.000 0.00 0.00 37.07 4.63
261 262 3.253432 ACATTTCAAAAGCCTTCGACTCC 59.747 43.478 0.00 0.00 0.00 3.85
262 263 4.467735 GACATTTCAAAAGCCTTCGACTC 58.532 43.478 0.00 0.00 0.00 3.36
263 264 3.253432 GGACATTTCAAAAGCCTTCGACT 59.747 43.478 0.00 0.00 0.00 4.18
264 265 3.004315 TGGACATTTCAAAAGCCTTCGAC 59.996 43.478 0.00 0.00 0.00 4.20
265 266 3.218453 TGGACATTTCAAAAGCCTTCGA 58.782 40.909 0.00 0.00 0.00 3.71
266 267 3.568538 CTGGACATTTCAAAAGCCTTCG 58.431 45.455 0.00 0.00 0.00 3.79
267 268 3.006217 AGCTGGACATTTCAAAAGCCTTC 59.994 43.478 0.00 0.00 0.00 3.46
268 269 2.967887 AGCTGGACATTTCAAAAGCCTT 59.032 40.909 0.00 0.00 0.00 4.35
269 270 2.601905 AGCTGGACATTTCAAAAGCCT 58.398 42.857 0.00 0.00 0.00 4.58
270 271 3.062042 CAAGCTGGACATTTCAAAAGCC 58.938 45.455 0.00 0.00 0.00 4.35
271 272 3.981211 TCAAGCTGGACATTTCAAAAGC 58.019 40.909 0.00 0.00 0.00 3.51
272 273 4.279169 TCCTCAAGCTGGACATTTCAAAAG 59.721 41.667 0.00 0.00 0.00 2.27
273 274 4.214310 TCCTCAAGCTGGACATTTCAAAA 58.786 39.130 0.00 0.00 0.00 2.44
274 275 3.831323 TCCTCAAGCTGGACATTTCAAA 58.169 40.909 0.00 0.00 0.00 2.69
275 276 3.507162 TCCTCAAGCTGGACATTTCAA 57.493 42.857 0.00 0.00 0.00 2.69
276 277 3.415212 CTTCCTCAAGCTGGACATTTCA 58.585 45.455 0.00 0.00 32.65 2.69
277 278 2.751806 CCTTCCTCAAGCTGGACATTTC 59.248 50.000 0.00 0.00 32.65 2.17
278 279 2.800250 CCTTCCTCAAGCTGGACATTT 58.200 47.619 0.00 0.00 32.65 2.32
279 280 1.615384 GCCTTCCTCAAGCTGGACATT 60.615 52.381 0.00 0.00 32.65 2.71
280 281 0.034670 GCCTTCCTCAAGCTGGACAT 60.035 55.000 0.00 0.00 32.65 3.06
281 282 1.130054 AGCCTTCCTCAAGCTGGACA 61.130 55.000 0.00 0.00 32.65 4.02
282 283 0.037447 AAGCCTTCCTCAAGCTGGAC 59.963 55.000 0.00 0.00 32.65 4.02
283 284 0.773644 AAAGCCTTCCTCAAGCTGGA 59.226 50.000 0.00 0.00 0.00 3.86
284 285 1.271656 CAAAAGCCTTCCTCAAGCTGG 59.728 52.381 0.00 0.00 0.00 4.85
285 286 1.271656 CCAAAAGCCTTCCTCAAGCTG 59.728 52.381 0.00 0.00 0.00 4.24
286 287 1.625511 CCAAAAGCCTTCCTCAAGCT 58.374 50.000 0.00 0.00 0.00 3.74
287 288 0.037882 GCCAAAAGCCTTCCTCAAGC 60.038 55.000 0.00 0.00 34.35 4.01
288 289 0.242017 CGCCAAAAGCCTTCCTCAAG 59.758 55.000 0.00 0.00 38.78 3.02
289 290 0.467290 ACGCCAAAAGCCTTCCTCAA 60.467 50.000 0.00 0.00 38.78 3.02
290 291 0.467290 AACGCCAAAAGCCTTCCTCA 60.467 50.000 0.00 0.00 38.78 3.86
291 292 0.039165 CAACGCCAAAAGCCTTCCTC 60.039 55.000 0.00 0.00 38.78 3.71
292 293 2.041153 CAACGCCAAAAGCCTTCCT 58.959 52.632 0.00 0.00 38.78 3.36
293 294 1.664649 GCAACGCCAAAAGCCTTCC 60.665 57.895 0.00 0.00 38.78 3.46
294 295 0.319813 ATGCAACGCCAAAAGCCTTC 60.320 50.000 0.00 0.00 38.78 3.46
295 296 0.600782 CATGCAACGCCAAAAGCCTT 60.601 50.000 0.00 0.00 38.78 4.35
296 297 1.005867 CATGCAACGCCAAAAGCCT 60.006 52.632 0.00 0.00 38.78 4.58
297 298 1.006337 TCATGCAACGCCAAAAGCC 60.006 52.632 0.00 0.00 38.78 4.35
298 299 0.597118 TGTCATGCAACGCCAAAAGC 60.597 50.000 0.00 0.00 38.52 3.51
299 300 1.987770 GATGTCATGCAACGCCAAAAG 59.012 47.619 0.00 0.00 0.00 2.27
300 301 1.339291 TGATGTCATGCAACGCCAAAA 59.661 42.857 0.00 0.00 0.00 2.44
301 302 0.957362 TGATGTCATGCAACGCCAAA 59.043 45.000 0.00 0.00 0.00 3.28
302 303 1.175654 ATGATGTCATGCAACGCCAA 58.824 45.000 0.00 0.00 34.83 4.52
303 304 1.670295 GTATGATGTCATGCAACGCCA 59.330 47.619 5.78 0.00 38.57 5.69
304 305 1.670295 TGTATGATGTCATGCAACGCC 59.330 47.619 10.69 0.00 44.03 5.68
338 339 6.799925 CGAAATGTAGTTTTGACGGCTATTTT 59.200 34.615 0.00 0.00 33.71 1.82
346 347 5.050634 TGGTCTTCGAAATGTAGTTTTGACG 60.051 40.000 0.00 0.00 39.40 4.35
398 402 3.350833 CCTCTGAATTTGGTCCCTTCTG 58.649 50.000 0.00 0.00 0.00 3.02
407 411 5.348986 CATCTTTGATGCCTCTGAATTTGG 58.651 41.667 0.00 0.00 0.00 3.28
478 483 4.778534 TGAAAGACTAGACGACCGATTT 57.221 40.909 0.00 0.00 0.00 2.17
485 490 5.366829 TTTGACGATGAAAGACTAGACGA 57.633 39.130 0.00 0.00 0.00 4.20
493 498 7.064609 GGTCAGATGTATTTTGACGATGAAAGA 59.935 37.037 0.00 0.00 41.57 2.52
624 700 3.161450 TAGATGGGGACTGCCGGC 61.161 66.667 22.73 22.73 33.83 6.13
633 709 2.140792 CGAGGTGGGGTAGATGGGG 61.141 68.421 0.00 0.00 0.00 4.96
674 754 0.391263 CGTACCTCAGGAACCAAGGC 60.391 60.000 0.00 0.00 33.21 4.35
718 798 6.947733 ACTGACTGGATTGGTTGATTGATAAA 59.052 34.615 0.00 0.00 0.00 1.40
723 803 5.106157 GGTAACTGACTGGATTGGTTGATTG 60.106 44.000 0.00 0.00 0.00 2.67
746 826 0.535335 TCCCGAGAATTCGTGGAAGG 59.465 55.000 17.53 8.23 45.28 3.46
796 877 1.091537 TAAAAGGGAATTCGCTGCCG 58.908 50.000 24.09 0.00 39.23 5.69
830 911 5.474825 GAATTCGCCCCATGAAAAAGTAAA 58.525 37.500 0.00 0.00 0.00 2.01
831 912 4.081917 GGAATTCGCCCCATGAAAAAGTAA 60.082 41.667 0.00 0.00 0.00 2.24
832 913 3.445805 GGAATTCGCCCCATGAAAAAGTA 59.554 43.478 0.00 0.00 0.00 2.24
833 914 2.233676 GGAATTCGCCCCATGAAAAAGT 59.766 45.455 0.00 0.00 0.00 2.66
834 915 2.418609 GGGAATTCGCCCCATGAAAAAG 60.419 50.000 11.31 0.00 42.62 2.27
835 916 1.552792 GGGAATTCGCCCCATGAAAAA 59.447 47.619 11.31 0.00 42.62 1.94
876 957 9.035890 CCCCAACATATCTACAAGTATCTATCA 57.964 37.037 0.00 0.00 0.00 2.15
877 958 9.256228 TCCCCAACATATCTACAAGTATCTATC 57.744 37.037 0.00 0.00 0.00 2.08
878 959 9.615660 TTCCCCAACATATCTACAAGTATCTAT 57.384 33.333 0.00 0.00 0.00 1.98
879 960 9.615660 ATTCCCCAACATATCTACAAGTATCTA 57.384 33.333 0.00 0.00 0.00 1.98
880 961 7.931015 TTCCCCAACATATCTACAAGTATCT 57.069 36.000 0.00 0.00 0.00 1.98
881 962 9.574516 AAATTCCCCAACATATCTACAAGTATC 57.425 33.333 0.00 0.00 0.00 2.24
882 963 9.574516 GAAATTCCCCAACATATCTACAAGTAT 57.425 33.333 0.00 0.00 0.00 2.12
883 964 7.713507 CGAAATTCCCCAACATATCTACAAGTA 59.286 37.037 0.00 0.00 0.00 2.24
884 965 6.542370 CGAAATTCCCCAACATATCTACAAGT 59.458 38.462 0.00 0.00 0.00 3.16
885 966 6.017109 CCGAAATTCCCCAACATATCTACAAG 60.017 42.308 0.00 0.00 0.00 3.16
886 967 5.825679 CCGAAATTCCCCAACATATCTACAA 59.174 40.000 0.00 0.00 0.00 2.41
887 968 5.104277 ACCGAAATTCCCCAACATATCTACA 60.104 40.000 0.00 0.00 0.00 2.74
888 969 5.238650 CACCGAAATTCCCCAACATATCTAC 59.761 44.000 0.00 0.00 0.00 2.59
889 970 5.373222 CACCGAAATTCCCCAACATATCTA 58.627 41.667 0.00 0.00 0.00 1.98
890 971 4.207165 CACCGAAATTCCCCAACATATCT 58.793 43.478 0.00 0.00 0.00 1.98
891 972 3.317993 CCACCGAAATTCCCCAACATATC 59.682 47.826 0.00 0.00 0.00 1.63
892 973 3.295973 CCACCGAAATTCCCCAACATAT 58.704 45.455 0.00 0.00 0.00 1.78
893 974 2.621929 CCCACCGAAATTCCCCAACATA 60.622 50.000 0.00 0.00 0.00 2.29
894 975 1.555967 CCACCGAAATTCCCCAACAT 58.444 50.000 0.00 0.00 0.00 2.71
895 976 0.540830 CCCACCGAAATTCCCCAACA 60.541 55.000 0.00 0.00 0.00 3.33
896 977 0.251430 TCCCACCGAAATTCCCCAAC 60.251 55.000 0.00 0.00 0.00 3.77
897 978 0.483328 TTCCCACCGAAATTCCCCAA 59.517 50.000 0.00 0.00 0.00 4.12
898 979 0.039035 CTTCCCACCGAAATTCCCCA 59.961 55.000 0.00 0.00 0.00 4.96
899 980 1.320344 GCTTCCCACCGAAATTCCCC 61.320 60.000 0.00 0.00 0.00 4.81
900 981 1.320344 GGCTTCCCACCGAAATTCCC 61.320 60.000 0.00 0.00 0.00 3.97
901 982 0.610785 TGGCTTCCCACCGAAATTCC 60.611 55.000 0.00 0.00 35.79 3.01
902 983 1.134946 CATGGCTTCCCACCGAAATTC 59.865 52.381 0.00 0.00 45.77 2.17
903 984 1.185315 CATGGCTTCCCACCGAAATT 58.815 50.000 0.00 0.00 45.77 1.82
904 985 0.684153 CCATGGCTTCCCACCGAAAT 60.684 55.000 0.00 0.00 45.77 2.17
905 986 1.304052 CCATGGCTTCCCACCGAAA 60.304 57.895 0.00 0.00 45.77 3.46
906 987 1.570857 ATCCATGGCTTCCCACCGAA 61.571 55.000 6.96 0.00 45.77 4.30
907 988 1.983119 GATCCATGGCTTCCCACCGA 61.983 60.000 6.96 0.00 45.77 4.69
908 989 1.526917 GATCCATGGCTTCCCACCG 60.527 63.158 6.96 0.00 45.77 4.94
909 990 1.152673 GGATCCATGGCTTCCCACC 60.153 63.158 18.31 6.21 45.77 4.61
910 991 0.466922 CAGGATCCATGGCTTCCCAC 60.467 60.000 22.98 5.82 45.77 4.61
912 993 0.776176 ATCAGGATCCATGGCTTCCC 59.224 55.000 22.98 14.08 0.00 3.97
913 994 2.158564 TCAATCAGGATCCATGGCTTCC 60.159 50.000 20.44 20.44 0.00 3.46
914 995 3.219176 TCAATCAGGATCCATGGCTTC 57.781 47.619 15.82 6.42 0.00 3.86
915 996 3.764218 GATCAATCAGGATCCATGGCTT 58.236 45.455 15.82 0.00 38.16 4.35
916 997 3.436577 GATCAATCAGGATCCATGGCT 57.563 47.619 15.82 0.00 38.16 4.75
923 1004 2.883386 GCAACAGGGATCAATCAGGATC 59.117 50.000 0.00 0.00 42.36 3.36
924 1005 2.512896 AGCAACAGGGATCAATCAGGAT 59.487 45.455 0.00 0.00 0.00 3.24
925 1006 1.918262 AGCAACAGGGATCAATCAGGA 59.082 47.619 0.00 0.00 0.00 3.86
926 1007 2.295885 GAGCAACAGGGATCAATCAGG 58.704 52.381 0.00 0.00 0.00 3.86
936 1062 1.601419 CTGGCAATGGAGCAACAGGG 61.601 60.000 0.00 0.00 35.83 4.45
944 1070 2.864114 CAGTCACCTGGCAATGGAG 58.136 57.895 0.00 0.00 34.90 3.86
964 1090 1.045407 TACCAAGAACGCAGACCAGT 58.955 50.000 0.00 0.00 0.00 4.00
965 1091 2.271800 GATACCAAGAACGCAGACCAG 58.728 52.381 0.00 0.00 0.00 4.00
966 1092 1.621317 TGATACCAAGAACGCAGACCA 59.379 47.619 0.00 0.00 0.00 4.02
967 1093 2.271800 CTGATACCAAGAACGCAGACC 58.728 52.381 0.00 0.00 0.00 3.85
968 1094 1.661112 GCTGATACCAAGAACGCAGAC 59.339 52.381 0.00 0.00 0.00 3.51
969 1095 1.550524 AGCTGATACCAAGAACGCAGA 59.449 47.619 0.00 0.00 0.00 4.26
970 1096 1.662629 CAGCTGATACCAAGAACGCAG 59.337 52.381 8.42 0.00 0.00 5.18
1119 1263 3.216292 GTGTGGGTGTGGGTGCAC 61.216 66.667 8.80 8.80 38.56 4.57
1443 1614 2.786495 CCTCCCCCTGACATCGACG 61.786 68.421 0.00 0.00 0.00 5.12
1446 1617 1.810606 CGATCCTCCCCCTGACATCG 61.811 65.000 0.00 0.00 0.00 3.84
1450 1621 2.491022 CGTCGATCCTCCCCCTGAC 61.491 68.421 0.00 0.00 0.00 3.51
1480 1651 2.407428 GCCGCTGGTAAGGGAAAGC 61.407 63.158 0.00 0.00 38.63 3.51
1632 1806 2.224137 ACTCATAGCACCATCATCACCG 60.224 50.000 0.00 0.00 0.00 4.94
1722 1896 2.757099 CCTGGGGGCATTGTGAGC 60.757 66.667 0.00 0.00 0.00 4.26
1829 2003 9.290988 TGGTCTTGCTAGAAACAAATTATGTAA 57.709 29.630 0.00 0.00 42.99 2.41
1830 2004 8.856153 TGGTCTTGCTAGAAACAAATTATGTA 57.144 30.769 0.00 0.00 42.99 2.29
1831 2005 7.448469 ACTGGTCTTGCTAGAAACAAATTATGT 59.552 33.333 0.00 0.00 46.82 2.29
1832 2006 7.820648 ACTGGTCTTGCTAGAAACAAATTATG 58.179 34.615 0.00 0.00 30.65 1.90
1833 2007 7.885399 AGACTGGTCTTGCTAGAAACAAATTAT 59.115 33.333 0.00 0.00 36.31 1.28
1834 2008 7.224297 AGACTGGTCTTGCTAGAAACAAATTA 58.776 34.615 0.00 0.00 36.31 1.40
1840 2014 4.463186 TCCTAGACTGGTCTTGCTAGAAAC 59.537 45.833 8.60 0.00 40.93 2.78
1911 2105 4.301072 AACAGCAAGTATCTGCCCTTTA 57.699 40.909 0.00 0.00 43.73 1.85
1915 2109 5.368989 ACTATTAACAGCAAGTATCTGCCC 58.631 41.667 0.00 0.00 43.73 5.36
1916 2110 7.210873 ACTACTATTAACAGCAAGTATCTGCC 58.789 38.462 0.00 0.00 43.73 4.85
1917 2111 7.921214 TGACTACTATTAACAGCAAGTATCTGC 59.079 37.037 0.00 0.00 42.97 4.26
1921 2115 9.973450 CAGATGACTACTATTAACAGCAAGTAT 57.027 33.333 0.00 0.00 0.00 2.12
1923 2117 6.758886 GCAGATGACTACTATTAACAGCAAGT 59.241 38.462 0.00 0.00 0.00 3.16
1924 2118 6.983307 AGCAGATGACTACTATTAACAGCAAG 59.017 38.462 0.00 0.00 0.00 4.01
1925 2119 6.878317 AGCAGATGACTACTATTAACAGCAA 58.122 36.000 0.00 0.00 0.00 3.91
1927 2121 8.353684 TCTTAGCAGATGACTACTATTAACAGC 58.646 37.037 0.00 0.00 0.00 4.40
1928 2122 9.891828 CTCTTAGCAGATGACTACTATTAACAG 57.108 37.037 0.00 0.00 0.00 3.16
1929 2123 8.353684 GCTCTTAGCAGATGACTACTATTAACA 58.646 37.037 0.00 0.00 41.89 2.41
1930 2124 8.573035 AGCTCTTAGCAGATGACTACTATTAAC 58.427 37.037 1.22 0.00 45.56 2.01
1932 2126 8.698973 AAGCTCTTAGCAGATGACTACTATTA 57.301 34.615 1.22 0.00 45.56 0.98
1933 2127 7.595819 AAGCTCTTAGCAGATGACTACTATT 57.404 36.000 1.22 0.00 45.56 1.73
1937 2131 5.300792 AGGTAAGCTCTTAGCAGATGACTAC 59.699 44.000 17.71 0.00 45.56 2.73
1939 2133 4.285863 AGGTAAGCTCTTAGCAGATGACT 58.714 43.478 17.71 0.00 45.56 3.41
1940 2134 4.098654 TGAGGTAAGCTCTTAGCAGATGAC 59.901 45.833 17.71 5.83 45.56 3.06
1943 2141 5.885449 ATTGAGGTAAGCTCTTAGCAGAT 57.115 39.130 17.71 8.06 45.56 2.90
1948 2146 7.875971 ACACAAAAATTGAGGTAAGCTCTTAG 58.124 34.615 0.00 0.00 0.00 2.18
1952 2150 6.319141 AGACACAAAAATTGAGGTAAGCTC 57.681 37.500 0.00 0.00 0.00 4.09
1996 2194 5.297776 CAGTCAAACAAGATTCCAAGTCACT 59.702 40.000 0.00 0.00 0.00 3.41
2002 2200 4.531854 TGTCCAGTCAAACAAGATTCCAA 58.468 39.130 0.00 0.00 0.00 3.53
2016 2214 5.934625 ACTCACACTTTGAATATGTCCAGTC 59.065 40.000 0.00 0.00 32.21 3.51
2017 2215 5.869579 ACTCACACTTTGAATATGTCCAGT 58.130 37.500 0.00 0.00 32.21 4.00
2018 2216 7.387673 TGTTACTCACACTTTGAATATGTCCAG 59.612 37.037 0.00 0.00 32.21 3.86
2019 2217 7.220740 TGTTACTCACACTTTGAATATGTCCA 58.779 34.615 0.00 0.00 32.21 4.02
2027 2225 9.921637 AAAGAAAATTGTTACTCACACTTTGAA 57.078 25.926 0.00 0.00 38.07 2.69
2028 2226 9.921637 AAAAGAAAATTGTTACTCACACTTTGA 57.078 25.926 0.00 0.00 38.07 2.69
2029 2227 9.956797 CAAAAGAAAATTGTTACTCACACTTTG 57.043 29.630 0.00 0.00 38.07 2.77
2030 2228 9.921637 TCAAAAGAAAATTGTTACTCACACTTT 57.078 25.926 0.00 0.00 39.34 2.66
2031 2229 9.921637 TTCAAAAGAAAATTGTTACTCACACTT 57.078 25.926 0.00 0.00 33.98 3.16
2032 2230 9.573133 CTTCAAAAGAAAATTGTTACTCACACT 57.427 29.630 0.00 0.00 33.98 3.55
2033 2231 8.807581 CCTTCAAAAGAAAATTGTTACTCACAC 58.192 33.333 0.00 0.00 33.98 3.82
2034 2232 8.744652 TCCTTCAAAAGAAAATTGTTACTCACA 58.255 29.630 0.00 0.00 0.00 3.58
2035 2233 9.581099 TTCCTTCAAAAGAAAATTGTTACTCAC 57.419 29.630 0.00 0.00 0.00 3.51
2046 2264 9.936759 ATGTGTTAGTTTTCCTTCAAAAGAAAA 57.063 25.926 0.00 0.00 34.49 2.29
2109 2328 0.762418 TGGACCACGACACAGGAATT 59.238 50.000 0.00 0.00 0.00 2.17
2123 2342 6.575162 AACTCATAGTTTCAATTGTGGACC 57.425 37.500 5.13 0.00 34.11 4.46
2153 2685 6.192956 GCTCTTAGCAGACAGGAATCACCT 62.193 50.000 0.00 0.00 45.42 4.00
2154 2686 3.791245 CTCTTAGCAGACAGGAATCACC 58.209 50.000 0.00 0.00 39.35 4.02
2155 2687 3.194062 GCTCTTAGCAGACAGGAATCAC 58.806 50.000 0.00 0.00 41.89 3.06
2168 2700 3.311048 GGCAATCACTACTTGCTCTTAGC 59.689 47.826 7.82 0.00 46.41 3.09
2169 2701 4.507710 TGGCAATCACTACTTGCTCTTAG 58.492 43.478 7.82 0.00 46.41 2.18
2170 2702 4.020218 ACTGGCAATCACTACTTGCTCTTA 60.020 41.667 7.82 0.00 46.41 2.10
2223 2974 0.536233 ATTACGCAACAGGCCACACA 60.536 50.000 5.01 0.00 40.31 3.72
2238 2989 2.092375 AGGCAGGCCCAGTCTAAATTAC 60.092 50.000 6.70 0.00 36.58 1.89
2282 3033 6.707161 ACAACTAAAACAGCCGAAAGTACATA 59.293 34.615 0.00 0.00 0.00 2.29
2288 3039 4.545823 TCACAACTAAAACAGCCGAAAG 57.454 40.909 0.00 0.00 0.00 2.62
2292 3043 3.684103 TGTTCACAACTAAAACAGCCG 57.316 42.857 0.00 0.00 0.00 5.52
2359 3125 1.401552 GACACAACAGCAGCAAAGACA 59.598 47.619 0.00 0.00 0.00 3.41
2360 3126 1.268743 GGACACAACAGCAGCAAAGAC 60.269 52.381 0.00 0.00 0.00 3.01
2361 3127 1.024271 GGACACAACAGCAGCAAAGA 58.976 50.000 0.00 0.00 0.00 2.52
2364 3130 0.394216 ACTGGACACAACAGCAGCAA 60.394 50.000 0.00 0.00 39.55 3.91
2370 3165 6.423001 GGTTACTACTTTACTGGACACAACAG 59.577 42.308 0.00 0.00 41.64 3.16
2373 3168 5.366186 TGGGTTACTACTTTACTGGACACAA 59.634 40.000 0.00 0.00 0.00 3.33
2377 3172 7.991084 AATTTGGGTTACTACTTTACTGGAC 57.009 36.000 0.00 0.00 0.00 4.02
2398 3193 5.728637 CCTGAAAAAGGGCAGTAGAAATT 57.271 39.130 0.00 0.00 43.15 1.82
2502 3306 0.176219 AGTTCGAACCAACACGACCA 59.824 50.000 24.22 0.00 38.24 4.02
2505 3309 1.563111 GACAGTTCGAACCAACACGA 58.437 50.000 24.22 0.00 36.75 4.35
2578 3422 3.235200 AGGAGAATGCCGTAATAGCTCT 58.765 45.455 0.00 0.00 0.00 4.09
2602 3446 1.055849 AATGGCAACCAGGGAAAACC 58.944 50.000 0.00 0.00 36.75 3.27
2603 3447 2.549992 GGAAATGGCAACCAGGGAAAAC 60.550 50.000 0.00 0.00 36.75 2.43
2635 3481 1.289066 CAAGGCTGTCGAACTCCGA 59.711 57.895 0.00 0.00 46.35 4.55
2636 3482 2.383527 GCAAGGCTGTCGAACTCCG 61.384 63.158 0.00 0.00 40.25 4.63
2637 3483 1.004440 AGCAAGGCTGTCGAACTCC 60.004 57.895 0.00 0.00 37.57 3.85
2667 3514 1.544759 CCCTTTTGTAAGAGCGGGTGT 60.545 52.381 0.00 0.00 32.92 4.16
2673 3520 3.609409 CGCTTCAACCCTTTTGTAAGAGC 60.609 47.826 0.00 0.00 32.92 4.09
2690 3537 1.750193 TTCATGGTCCATTCCGCTTC 58.250 50.000 0.00 0.00 0.00 3.86
2694 3541 5.767665 TGGTTATTATTCATGGTCCATTCCG 59.232 40.000 0.00 0.00 0.00 4.30
2696 3543 7.939039 TCTCTGGTTATTATTCATGGTCCATTC 59.061 37.037 0.00 0.00 0.00 2.67
2697 3544 7.815383 TCTCTGGTTATTATTCATGGTCCATT 58.185 34.615 0.00 0.00 0.00 3.16
2705 3552 7.129457 TGACTGCTCTCTGGTTATTATTCAT 57.871 36.000 0.00 0.00 0.00 2.57
2706 3553 6.544928 TGACTGCTCTCTGGTTATTATTCA 57.455 37.500 0.00 0.00 0.00 2.57
2707 3554 6.648725 GGATGACTGCTCTCTGGTTATTATTC 59.351 42.308 0.00 0.00 0.00 1.75
2708 3555 6.100279 TGGATGACTGCTCTCTGGTTATTATT 59.900 38.462 0.00 0.00 0.00 1.40
2709 3556 5.604231 TGGATGACTGCTCTCTGGTTATTAT 59.396 40.000 0.00 0.00 0.00 1.28
2710 3557 4.962362 TGGATGACTGCTCTCTGGTTATTA 59.038 41.667 0.00 0.00 0.00 0.98
2737 3599 2.865119 TATATCCTGGCTGCCACATG 57.135 50.000 19.30 8.47 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.