Multiple sequence alignment - TraesCS5B01G014800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G014800 chr5B 100.000 4955 0 0 450 5404 13918880 13923834 0.000000e+00 9151.0
1 TraesCS5B01G014800 chr5B 92.497 2319 143 16 1342 3644 13858693 13860996 0.000000e+00 3290.0
2 TraesCS5B01G014800 chr5B 88.123 1987 193 24 1683 3644 14147126 14145158 0.000000e+00 2322.0
3 TraesCS5B01G014800 chr5B 86.307 1037 120 10 3818 4852 13861288 13862304 0.000000e+00 1109.0
4 TraesCS5B01G014800 chr5B 83.333 900 136 13 3864 4759 14144860 14143971 0.000000e+00 819.0
5 TraesCS5B01G014800 chr5B 86.282 503 43 11 1190 1668 14156542 14156042 1.720000e-144 523.0
6 TraesCS5B01G014800 chr5B 81.699 459 49 19 4979 5404 13867433 13867889 3.100000e-92 350.0
7 TraesCS5B01G014800 chr5B 86.239 218 26 1 974 1191 13858307 13858520 3.250000e-57 233.0
8 TraesCS5B01G014800 chr5B 87.931 116 14 0 3638 3753 13861171 13861286 2.630000e-28 137.0
9 TraesCS5B01G014800 chr5B 100.000 40 0 0 1 40 13918431 13918470 2.090000e-09 75.0
10 TraesCS5B01G014800 chr5D 92.159 2321 134 19 1342 3642 21012867 21015159 0.000000e+00 3234.0
11 TraesCS5B01G014800 chr5D 94.721 1023 50 4 3638 4658 21015302 21016322 0.000000e+00 1587.0
12 TraesCS5B01G014800 chr5D 90.705 667 57 4 4652 5318 21016356 21017017 0.000000e+00 883.0
13 TraesCS5B01G014800 chr5D 95.946 74 3 0 5314 5387 21017044 21017117 2.640000e-23 121.0
14 TraesCS5B01G014800 chr5A 92.896 1464 86 6 2195 3642 12558998 12560459 0.000000e+00 2111.0
15 TraesCS5B01G014800 chr5A 93.969 1028 54 4 3638 4658 12560602 12561628 0.000000e+00 1548.0
16 TraesCS5B01G014800 chr5A 91.442 853 64 8 1342 2191 12556087 12556933 0.000000e+00 1162.0
17 TraesCS5B01G014800 chr5A 91.122 811 64 5 1344 2151 12408553 12409358 0.000000e+00 1092.0
18 TraesCS5B01G014800 chr5A 87.931 928 101 6 3816 4742 12415023 12415940 0.000000e+00 1083.0
19 TraesCS5B01G014800 chr5A 86.354 938 103 14 2149 3079 12411635 12412554 0.000000e+00 1000.0
20 TraesCS5B01G014800 chr5A 89.505 667 65 4 4652 5318 12561659 12562320 0.000000e+00 839.0
21 TraesCS5B01G014800 chr5A 88.889 558 57 3 3092 3644 12414183 12414740 0.000000e+00 682.0
22 TraesCS5B01G014800 chr5A 85.333 225 26 3 967 1191 12408164 12408381 5.450000e-55 226.0
23 TraesCS5B01G014800 chr5A 91.411 163 14 0 5156 5318 12418974 12419136 1.960000e-54 224.0
24 TraesCS5B01G014800 chr5A 95.652 92 4 0 5313 5404 12562345 12562436 1.210000e-31 148.0
25 TraesCS5B01G014800 chr5A 95.604 91 4 0 5314 5404 12419162 12419252 4.360000e-31 147.0
26 TraesCS5B01G014800 chr5A 94.030 67 4 0 1241 1307 12408491 12408557 9.580000e-18 102.0
27 TraesCS5B01G014800 chr5A 93.939 66 3 1 3753 3817 422040423 422040358 1.240000e-16 99.0
28 TraesCS5B01G014800 chr5A 88.750 80 6 3 3753 3831 23817590 23817513 1.600000e-15 95.3
29 TraesCS5B01G014800 chr7B 95.385 65 3 0 3753 3817 296330826 296330890 2.660000e-18 104.0
30 TraesCS5B01G014800 chr1D 91.892 74 6 0 3746 3819 15516882 15516955 2.660000e-18 104.0
31 TraesCS5B01G014800 chr1D 93.939 66 1 3 3753 3817 22376874 22376937 4.460000e-16 97.1
32 TraesCS5B01G014800 chr7D 93.939 66 4 0 3752 3817 604972525 604972460 3.440000e-17 100.0
33 TraesCS5B01G014800 chr3B 93.939 66 2 2 3753 3817 636452109 636452045 1.240000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G014800 chr5B 13918431 13923834 5403 False 4613.00 9151 100.00000 1 5404 2 chr5B.!!$F3 5403
1 TraesCS5B01G014800 chr5B 14143971 14147126 3155 True 1570.50 2322 85.72800 1683 4759 2 chr5B.!!$R2 3076
2 TraesCS5B01G014800 chr5B 13858307 13862304 3997 False 1192.25 3290 88.24350 974 4852 4 chr5B.!!$F2 3878
3 TraesCS5B01G014800 chr5B 14156042 14156542 500 True 523.00 523 86.28200 1190 1668 1 chr5B.!!$R1 478
4 TraesCS5B01G014800 chr5D 21012867 21017117 4250 False 1456.25 3234 93.38275 1342 5387 4 chr5D.!!$F1 4045
5 TraesCS5B01G014800 chr5A 12556087 12562436 6349 False 1161.60 2111 92.69280 1342 5404 5 chr5A.!!$F2 4062
6 TraesCS5B01G014800 chr5A 12408164 12419252 11088 False 569.50 1092 90.08425 967 5404 8 chr5A.!!$F1 4437

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
998 999 0.103208 GAGGTCGATCGTTCTGCCAT 59.897 55.000 15.94 0.00 0.0 4.40 F
1132 1133 0.690192 TTTCAGGCCATTCACTCCGA 59.310 50.000 5.01 0.00 0.0 4.55 F
1859 1939 1.221414 GAAGAAACACTCAGCAGCGT 58.779 50.000 0.00 0.00 0.0 5.07 F
2869 7307 1.329906 CTCTGAATCGCATGCAGGAAC 59.670 52.381 19.57 7.24 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 2024 0.034337 AAAGAGGCGTTTCCAGCGTA 59.966 50.000 0.0 0.0 37.29 4.42 R
2076 2156 0.174617 GCTCCTCACAGTACAGAGCC 59.825 60.000 0.0 0.0 43.27 4.70 R
3217 9296 1.000274 GTTTCCTCACGCCATTTTGCT 60.000 47.619 0.0 0.0 0.00 3.91 R
4826 11179 0.317799 GCATGGGCACATTTGACACA 59.682 50.000 0.0 0.0 40.72 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.524318 CGGCGGTGCGATTAGGGT 62.524 66.667 0.00 0.00 0.00 4.34
29 30 2.895372 GGCGGTGCGATTAGGGTG 60.895 66.667 0.00 0.00 0.00 4.61
30 31 2.895372 GCGGTGCGATTAGGGTGG 60.895 66.667 0.00 0.00 0.00 4.61
31 32 2.895372 CGGTGCGATTAGGGTGGC 60.895 66.667 0.00 0.00 0.00 5.01
32 33 2.516225 GGTGCGATTAGGGTGGCC 60.516 66.667 0.00 0.00 0.00 5.36
33 34 2.516225 GTGCGATTAGGGTGGCCC 60.516 66.667 0.00 0.00 45.90 5.80
521 522 8.611654 TTTTTGTCTAGTAGATTAACCGCTTT 57.388 30.769 2.51 0.00 0.00 3.51
522 523 8.611654 TTTTGTCTAGTAGATTAACCGCTTTT 57.388 30.769 2.51 0.00 0.00 2.27
523 524 8.611654 TTTGTCTAGTAGATTAACCGCTTTTT 57.388 30.769 2.51 0.00 0.00 1.94
544 545 6.385649 TTTTCAGGGATAACAATATTCCGC 57.614 37.500 0.00 0.00 41.54 5.54
545 546 4.698201 TCAGGGATAACAATATTCCGCA 57.302 40.909 0.00 0.00 41.54 5.69
546 547 5.042463 TCAGGGATAACAATATTCCGCAA 57.958 39.130 0.00 0.00 41.54 4.85
547 548 5.630121 TCAGGGATAACAATATTCCGCAAT 58.370 37.500 0.00 0.00 41.54 3.56
548 549 6.774673 TCAGGGATAACAATATTCCGCAATA 58.225 36.000 0.00 0.00 41.54 1.90
549 550 7.227873 TCAGGGATAACAATATTCCGCAATAA 58.772 34.615 0.00 0.00 41.54 1.40
550 551 7.721842 TCAGGGATAACAATATTCCGCAATAAA 59.278 33.333 0.00 0.00 41.54 1.40
551 552 8.356657 CAGGGATAACAATATTCCGCAATAAAA 58.643 33.333 0.00 0.00 41.54 1.52
552 553 8.919145 AGGGATAACAATATTCCGCAATAAAAA 58.081 29.630 0.00 0.00 41.54 1.94
553 554 9.705290 GGGATAACAATATTCCGCAATAAAAAT 57.295 29.630 0.00 0.00 27.20 1.82
566 567 9.944663 TCCGCAATAAAAATGTATTTCTCATAC 57.055 29.630 0.00 0.00 0.00 2.39
567 568 9.729023 CCGCAATAAAAATGTATTTCTCATACA 57.271 29.630 0.00 0.00 38.66 2.29
691 692 6.851609 TCATGTCAAATAGTGTAACAATGGC 58.148 36.000 0.00 0.00 41.43 4.40
692 693 6.658816 TCATGTCAAATAGTGTAACAATGGCT 59.341 34.615 0.00 0.00 41.43 4.75
693 694 6.892658 TGTCAAATAGTGTAACAATGGCTT 57.107 33.333 0.00 0.00 41.43 4.35
694 695 7.283625 TGTCAAATAGTGTAACAATGGCTTT 57.716 32.000 0.00 0.00 41.43 3.51
695 696 8.397575 TGTCAAATAGTGTAACAATGGCTTTA 57.602 30.769 0.00 0.00 41.43 1.85
696 697 9.019656 TGTCAAATAGTGTAACAATGGCTTTAT 57.980 29.630 0.00 0.00 41.43 1.40
697 698 9.855021 GTCAAATAGTGTAACAATGGCTTTATT 57.145 29.630 0.00 0.00 41.43 1.40
698 699 9.853555 TCAAATAGTGTAACAATGGCTTTATTG 57.146 29.630 0.00 0.00 41.43 1.90
699 700 9.086336 CAAATAGTGTAACAATGGCTTTATTGG 57.914 33.333 11.55 0.00 41.29 3.16
700 701 7.954666 ATAGTGTAACAATGGCTTTATTGGT 57.045 32.000 11.55 8.50 41.29 3.67
701 702 9.469097 AATAGTGTAACAATGGCTTTATTGGTA 57.531 29.630 11.55 7.73 41.29 3.25
702 703 7.391148 AGTGTAACAATGGCTTTATTGGTAG 57.609 36.000 11.55 0.00 39.99 3.18
703 704 6.946009 AGTGTAACAATGGCTTTATTGGTAGT 59.054 34.615 11.55 0.00 39.99 2.73
704 705 7.027161 GTGTAACAATGGCTTTATTGGTAGTG 58.973 38.462 11.55 0.00 39.99 2.74
705 706 6.943146 TGTAACAATGGCTTTATTGGTAGTGA 59.057 34.615 11.55 0.00 39.99 3.41
706 707 5.897377 ACAATGGCTTTATTGGTAGTGAC 57.103 39.130 11.55 0.00 41.29 3.67
707 708 4.394920 ACAATGGCTTTATTGGTAGTGACG 59.605 41.667 11.55 0.00 41.29 4.35
708 709 3.965379 TGGCTTTATTGGTAGTGACGA 57.035 42.857 0.00 0.00 0.00 4.20
709 710 3.592059 TGGCTTTATTGGTAGTGACGAC 58.408 45.455 0.00 0.00 0.00 4.34
710 711 3.007074 TGGCTTTATTGGTAGTGACGACA 59.993 43.478 0.00 0.00 0.00 4.35
711 712 4.189231 GGCTTTATTGGTAGTGACGACAT 58.811 43.478 0.00 0.00 0.00 3.06
712 713 5.105269 TGGCTTTATTGGTAGTGACGACATA 60.105 40.000 0.00 0.00 0.00 2.29
713 714 5.233689 GGCTTTATTGGTAGTGACGACATAC 59.766 44.000 0.00 0.00 0.00 2.39
714 715 5.808540 GCTTTATTGGTAGTGACGACATACA 59.191 40.000 0.00 0.00 0.00 2.29
715 716 6.479001 GCTTTATTGGTAGTGACGACATACAT 59.521 38.462 0.00 0.00 0.00 2.29
716 717 7.306632 GCTTTATTGGTAGTGACGACATACATC 60.307 40.741 0.00 0.00 0.00 3.06
717 718 5.592104 ATTGGTAGTGACGACATACATCA 57.408 39.130 0.00 0.00 0.00 3.07
718 719 5.592104 TTGGTAGTGACGACATACATCAT 57.408 39.130 0.00 0.00 0.00 2.45
719 720 5.592104 TGGTAGTGACGACATACATCATT 57.408 39.130 0.00 0.00 0.00 2.57
720 721 5.348164 TGGTAGTGACGACATACATCATTG 58.652 41.667 0.00 0.00 0.00 2.82
721 722 5.105513 TGGTAGTGACGACATACATCATTGT 60.106 40.000 0.00 0.00 39.98 2.71
722 723 5.810587 GGTAGTGACGACATACATCATTGTT 59.189 40.000 0.00 0.00 37.28 2.83
723 724 5.784750 AGTGACGACATACATCATTGTTG 57.215 39.130 0.00 0.00 37.28 3.33
724 725 4.631377 AGTGACGACATACATCATTGTTGG 59.369 41.667 0.00 0.00 37.28 3.77
725 726 3.373748 TGACGACATACATCATTGTTGGC 59.626 43.478 0.00 0.00 37.28 4.52
726 727 3.609853 ACGACATACATCATTGTTGGCT 58.390 40.909 0.00 0.00 37.28 4.75
727 728 3.374988 ACGACATACATCATTGTTGGCTG 59.625 43.478 0.00 0.11 37.28 4.85
728 729 3.699067 GACATACATCATTGTTGGCTGC 58.301 45.455 0.00 0.00 37.28 5.25
729 730 3.090790 ACATACATCATTGTTGGCTGCA 58.909 40.909 0.50 0.00 37.28 4.41
730 731 3.129813 ACATACATCATTGTTGGCTGCAG 59.870 43.478 10.11 10.11 37.28 4.41
731 732 0.245539 ACATCATTGTTGGCTGCAGC 59.754 50.000 30.88 30.88 34.31 5.25
732 733 0.800683 CATCATTGTTGGCTGCAGCG 60.801 55.000 31.19 16.24 43.26 5.18
733 734 2.552585 ATCATTGTTGGCTGCAGCGC 62.553 55.000 31.19 23.57 43.26 5.92
734 735 2.987547 ATTGTTGGCTGCAGCGCT 60.988 55.556 31.19 2.64 43.26 5.92
735 736 2.567497 ATTGTTGGCTGCAGCGCTT 61.567 52.632 31.19 10.64 43.26 4.68
736 737 2.482296 ATTGTTGGCTGCAGCGCTTC 62.482 55.000 31.19 18.32 43.26 3.86
737 738 3.663176 GTTGGCTGCAGCGCTTCA 61.663 61.111 31.19 20.76 43.26 3.02
738 739 2.674033 TTGGCTGCAGCGCTTCAT 60.674 55.556 31.19 0.00 43.26 2.57
739 740 2.693762 TTGGCTGCAGCGCTTCATC 61.694 57.895 31.19 16.48 43.26 2.92
740 741 3.129502 GGCTGCAGCGCTTCATCA 61.130 61.111 31.19 4.28 43.26 3.07
741 742 2.693762 GGCTGCAGCGCTTCATCAA 61.694 57.895 31.19 0.00 43.26 2.57
742 743 1.513586 GCTGCAGCGCTTCATCAAC 60.514 57.895 25.23 0.00 0.00 3.18
743 744 1.871077 CTGCAGCGCTTCATCAACA 59.129 52.632 10.90 0.00 0.00 3.33
744 745 0.450583 CTGCAGCGCTTCATCAACAT 59.549 50.000 10.90 0.00 0.00 2.71
745 746 1.667212 CTGCAGCGCTTCATCAACATA 59.333 47.619 10.90 0.00 0.00 2.29
746 747 1.398041 TGCAGCGCTTCATCAACATAC 59.602 47.619 7.50 0.00 0.00 2.39
747 748 1.667724 GCAGCGCTTCATCAACATACT 59.332 47.619 7.50 0.00 0.00 2.12
748 749 2.866156 GCAGCGCTTCATCAACATACTA 59.134 45.455 7.50 0.00 0.00 1.82
749 750 3.309682 GCAGCGCTTCATCAACATACTAA 59.690 43.478 7.50 0.00 0.00 2.24
750 751 4.024556 GCAGCGCTTCATCAACATACTAAT 60.025 41.667 7.50 0.00 0.00 1.73
751 752 5.438117 CAGCGCTTCATCAACATACTAATG 58.562 41.667 7.50 0.00 39.17 1.90
752 753 4.512944 AGCGCTTCATCAACATACTAATGG 59.487 41.667 2.64 0.00 37.43 3.16
753 754 4.511454 GCGCTTCATCAACATACTAATGGA 59.489 41.667 0.00 0.00 37.43 3.41
754 755 5.333645 GCGCTTCATCAACATACTAATGGAG 60.334 44.000 0.00 0.00 37.43 3.86
755 756 5.333645 CGCTTCATCAACATACTAATGGAGC 60.334 44.000 4.70 4.70 44.06 4.70
756 757 5.762218 GCTTCATCAACATACTAATGGAGCT 59.238 40.000 7.13 0.00 44.11 4.09
757 758 6.261826 GCTTCATCAACATACTAATGGAGCTT 59.738 38.462 7.13 0.00 44.11 3.74
758 759 7.558161 TTCATCAACATACTAATGGAGCTTG 57.442 36.000 0.00 0.00 37.43 4.01
759 760 6.653020 TCATCAACATACTAATGGAGCTTGT 58.347 36.000 0.00 0.00 37.43 3.16
760 761 7.791029 TCATCAACATACTAATGGAGCTTGTA 58.209 34.615 0.00 0.00 37.43 2.41
761 762 7.928167 TCATCAACATACTAATGGAGCTTGTAG 59.072 37.037 0.00 0.00 37.43 2.74
762 763 6.049149 TCAACATACTAATGGAGCTTGTAGC 58.951 40.000 0.00 0.00 38.32 3.58
763 764 5.878406 ACATACTAATGGAGCTTGTAGCT 57.122 39.130 0.00 0.00 44.75 3.32
764 765 5.605534 ACATACTAATGGAGCTTGTAGCTG 58.394 41.667 5.83 0.00 43.11 4.24
765 766 5.453903 ACATACTAATGGAGCTTGTAGCTGG 60.454 44.000 5.83 0.00 43.11 4.85
766 767 7.822057 ACATACTAATGGAGCTTGTAGCTGGT 61.822 42.308 5.83 0.00 43.11 4.00
767 768 9.728025 ACATACTAATGGAGCTTGTAGCTGGTG 62.728 44.444 5.83 0.00 43.11 4.17
775 776 4.561735 GCTTGTAGCTGGTGTTAACAAA 57.438 40.909 10.51 0.77 38.45 2.83
776 777 4.537015 GCTTGTAGCTGGTGTTAACAAAG 58.463 43.478 10.51 12.03 38.45 2.77
777 778 4.036380 GCTTGTAGCTGGTGTTAACAAAGT 59.964 41.667 10.51 5.21 38.45 2.66
778 779 5.449999 GCTTGTAGCTGGTGTTAACAAAGTT 60.450 40.000 10.51 11.35 38.45 2.66
779 780 5.744666 TGTAGCTGGTGTTAACAAAGTTC 57.255 39.130 10.51 0.00 0.00 3.01
780 781 5.186942 TGTAGCTGGTGTTAACAAAGTTCA 58.813 37.500 10.51 8.88 0.00 3.18
781 782 4.900635 AGCTGGTGTTAACAAAGTTCAG 57.099 40.909 10.51 13.12 0.00 3.02
782 783 4.523083 AGCTGGTGTTAACAAAGTTCAGA 58.477 39.130 10.51 0.00 0.00 3.27
783 784 4.576463 AGCTGGTGTTAACAAAGTTCAGAG 59.424 41.667 10.51 0.00 0.00 3.35
784 785 4.574828 GCTGGTGTTAACAAAGTTCAGAGA 59.425 41.667 10.51 0.00 0.00 3.10
785 786 5.277538 GCTGGTGTTAACAAAGTTCAGAGAG 60.278 44.000 10.51 0.00 0.00 3.20
786 787 5.741011 TGGTGTTAACAAAGTTCAGAGAGT 58.259 37.500 10.51 0.00 0.00 3.24
787 788 6.177610 TGGTGTTAACAAAGTTCAGAGAGTT 58.822 36.000 10.51 0.00 0.00 3.01
788 789 6.315393 TGGTGTTAACAAAGTTCAGAGAGTTC 59.685 38.462 10.51 0.00 0.00 3.01
789 790 6.539103 GGTGTTAACAAAGTTCAGAGAGTTCT 59.461 38.462 10.51 0.00 0.00 3.01
790 791 7.254488 GGTGTTAACAAAGTTCAGAGAGTTCTC 60.254 40.741 10.51 0.80 43.17 2.87
791 792 6.761714 TGTTAACAAAGTTCAGAGAGTTCTCC 59.238 38.462 5.64 0.00 43.88 3.71
792 793 5.622346 AACAAAGTTCAGAGAGTTCTCCT 57.378 39.130 5.55 0.00 43.88 3.69
793 794 4.954875 ACAAAGTTCAGAGAGTTCTCCTG 58.045 43.478 5.55 6.49 43.88 3.86
794 795 4.651503 ACAAAGTTCAGAGAGTTCTCCTGA 59.348 41.667 5.55 13.10 43.88 3.86
795 796 5.129485 ACAAAGTTCAGAGAGTTCTCCTGAA 59.871 40.000 19.55 19.55 43.88 3.02
796 797 5.878406 AAGTTCAGAGAGTTCTCCTGAAA 57.122 39.130 22.40 12.32 43.88 2.69
797 798 6.432403 AAGTTCAGAGAGTTCTCCTGAAAT 57.568 37.500 22.40 20.41 43.88 2.17
798 799 7.546250 AAGTTCAGAGAGTTCTCCTGAAATA 57.454 36.000 22.40 9.33 43.88 1.40
799 800 7.546250 AGTTCAGAGAGTTCTCCTGAAATAA 57.454 36.000 22.40 9.10 43.88 1.40
800 801 7.967908 AGTTCAGAGAGTTCTCCTGAAATAAA 58.032 34.615 22.40 8.87 43.88 1.40
801 802 8.432805 AGTTCAGAGAGTTCTCCTGAAATAAAA 58.567 33.333 22.40 8.42 43.88 1.52
802 803 9.225436 GTTCAGAGAGTTCTCCTGAAATAAAAT 57.775 33.333 22.40 0.00 43.88 1.82
803 804 9.442047 TTCAGAGAGTTCTCCTGAAATAAAATC 57.558 33.333 20.39 0.00 43.88 2.17
804 805 8.820831 TCAGAGAGTTCTCCTGAAATAAAATCT 58.179 33.333 14.08 0.00 43.88 2.40
807 808 9.877178 GAGAGTTCTCCTGAAATAAAATCTACA 57.123 33.333 0.00 0.00 37.02 2.74
810 811 9.454859 AGTTCTCCTGAAATAAAATCTACAAGG 57.545 33.333 0.00 0.00 33.52 3.61
811 812 7.865706 TCTCCTGAAATAAAATCTACAAGGC 57.134 36.000 0.00 0.00 0.00 4.35
812 813 7.633789 TCTCCTGAAATAAAATCTACAAGGCT 58.366 34.615 0.00 0.00 0.00 4.58
813 814 7.770897 TCTCCTGAAATAAAATCTACAAGGCTC 59.229 37.037 0.00 0.00 0.00 4.70
814 815 6.538742 TCCTGAAATAAAATCTACAAGGCTCG 59.461 38.462 0.00 0.00 0.00 5.03
815 816 6.538742 CCTGAAATAAAATCTACAAGGCTCGA 59.461 38.462 0.00 0.00 0.00 4.04
816 817 7.065803 CCTGAAATAAAATCTACAAGGCTCGAA 59.934 37.037 0.00 0.00 0.00 3.71
817 818 7.748847 TGAAATAAAATCTACAAGGCTCGAAC 58.251 34.615 0.00 0.00 0.00 3.95
818 819 7.606456 TGAAATAAAATCTACAAGGCTCGAACT 59.394 33.333 0.00 0.00 0.00 3.01
819 820 7.923414 AATAAAATCTACAAGGCTCGAACTT 57.077 32.000 0.00 0.00 0.00 2.66
820 821 9.444600 AAATAAAATCTACAAGGCTCGAACTTA 57.555 29.630 2.11 0.00 0.00 2.24
821 822 9.444600 AATAAAATCTACAAGGCTCGAACTTAA 57.555 29.630 2.11 0.00 0.00 1.85
822 823 6.723131 AAATCTACAAGGCTCGAACTTAAC 57.277 37.500 2.11 0.00 0.00 2.01
823 824 5.662674 ATCTACAAGGCTCGAACTTAACT 57.337 39.130 2.11 0.00 0.00 2.24
824 825 4.806330 TCTACAAGGCTCGAACTTAACTG 58.194 43.478 2.11 0.00 0.00 3.16
825 826 2.767505 ACAAGGCTCGAACTTAACTGG 58.232 47.619 2.11 0.00 0.00 4.00
826 827 1.464997 CAAGGCTCGAACTTAACTGGC 59.535 52.381 2.11 0.00 0.00 4.85
827 828 0.977395 AGGCTCGAACTTAACTGGCT 59.023 50.000 0.00 0.00 0.00 4.75
828 829 2.176889 AGGCTCGAACTTAACTGGCTA 58.823 47.619 0.00 0.00 0.00 3.93
829 830 2.166664 AGGCTCGAACTTAACTGGCTAG 59.833 50.000 0.00 0.00 0.00 3.42
830 831 2.541556 GCTCGAACTTAACTGGCTAGG 58.458 52.381 0.85 0.00 0.00 3.02
831 832 2.541556 CTCGAACTTAACTGGCTAGGC 58.458 52.381 9.85 9.85 0.00 3.93
845 846 2.985896 GCTAGGCCACAAAGTATGACA 58.014 47.619 5.01 0.00 0.00 3.58
846 847 2.678336 GCTAGGCCACAAAGTATGACAC 59.322 50.000 5.01 0.00 0.00 3.67
847 848 1.808411 AGGCCACAAAGTATGACACG 58.192 50.000 5.01 0.00 0.00 4.49
848 849 1.071699 AGGCCACAAAGTATGACACGT 59.928 47.619 5.01 0.00 0.00 4.49
849 850 1.877443 GGCCACAAAGTATGACACGTT 59.123 47.619 0.00 0.00 0.00 3.99
858 859 7.533474 CAAAGTATGACACGTTGTTTACATG 57.467 36.000 0.00 0.00 40.48 3.21
859 860 5.856126 AGTATGACACGTTGTTTACATGG 57.144 39.130 0.00 0.00 0.00 3.66
860 861 5.302360 AGTATGACACGTTGTTTACATGGT 58.698 37.500 0.00 0.00 0.00 3.55
861 862 3.953874 TGACACGTTGTTTACATGGTG 57.046 42.857 0.00 10.44 36.27 4.17
862 863 3.271729 TGACACGTTGTTTACATGGTGT 58.728 40.909 15.08 15.08 41.84 4.16
863 864 3.868835 GACACGTTGTTTACATGGTGTC 58.131 45.455 20.90 20.90 44.35 3.67
864 865 2.614983 ACACGTTGTTTACATGGTGTCC 59.385 45.455 11.40 0.00 37.80 4.02
865 866 2.875933 CACGTTGTTTACATGGTGTCCT 59.124 45.455 0.00 0.00 0.00 3.85
866 867 3.059188 CACGTTGTTTACATGGTGTCCTC 60.059 47.826 0.00 0.00 0.00 3.71
867 868 2.156891 CGTTGTTTACATGGTGTCCTCG 59.843 50.000 0.00 0.00 0.00 4.63
868 869 3.395639 GTTGTTTACATGGTGTCCTCGA 58.604 45.455 0.00 0.00 0.00 4.04
869 870 3.034721 TGTTTACATGGTGTCCTCGAC 57.965 47.619 0.00 0.00 0.00 4.20
870 871 2.631062 TGTTTACATGGTGTCCTCGACT 59.369 45.455 0.00 0.00 33.15 4.18
871 872 3.251571 GTTTACATGGTGTCCTCGACTC 58.748 50.000 0.00 0.00 33.15 3.36
872 873 1.471119 TACATGGTGTCCTCGACTCC 58.529 55.000 0.00 6.04 43.84 3.85
873 874 0.251832 ACATGGTGTCCTCGACTCCT 60.252 55.000 12.63 0.00 43.89 3.69
874 875 0.457851 CATGGTGTCCTCGACTCCTC 59.542 60.000 12.63 0.00 43.89 3.71
875 876 0.333312 ATGGTGTCCTCGACTCCTCT 59.667 55.000 12.63 0.43 43.89 3.69
876 877 0.322636 TGGTGTCCTCGACTCCTCTC 60.323 60.000 12.63 0.00 43.89 3.20
877 878 0.322636 GGTGTCCTCGACTCCTCTCA 60.323 60.000 5.79 0.00 41.36 3.27
878 879 1.683629 GGTGTCCTCGACTCCTCTCAT 60.684 57.143 5.79 0.00 41.36 2.90
879 880 1.403679 GTGTCCTCGACTCCTCTCATG 59.596 57.143 0.00 0.00 33.15 3.07
880 881 1.004862 TGTCCTCGACTCCTCTCATGT 59.995 52.381 0.00 0.00 33.15 3.21
881 882 2.096248 GTCCTCGACTCCTCTCATGTT 58.904 52.381 0.00 0.00 0.00 2.71
882 883 2.098443 GTCCTCGACTCCTCTCATGTTC 59.902 54.545 0.00 0.00 0.00 3.18
883 884 2.025793 TCCTCGACTCCTCTCATGTTCT 60.026 50.000 0.00 0.00 0.00 3.01
884 885 2.757868 CCTCGACTCCTCTCATGTTCTT 59.242 50.000 0.00 0.00 0.00 2.52
885 886 3.948473 CCTCGACTCCTCTCATGTTCTTA 59.052 47.826 0.00 0.00 0.00 2.10
886 887 4.582656 CCTCGACTCCTCTCATGTTCTTAT 59.417 45.833 0.00 0.00 0.00 1.73
887 888 5.765677 CCTCGACTCCTCTCATGTTCTTATA 59.234 44.000 0.00 0.00 0.00 0.98
888 889 6.432783 CCTCGACTCCTCTCATGTTCTTATAT 59.567 42.308 0.00 0.00 0.00 0.86
889 890 7.608376 CCTCGACTCCTCTCATGTTCTTATATA 59.392 40.741 0.00 0.00 0.00 0.86
890 891 8.919777 TCGACTCCTCTCATGTTCTTATATAA 57.080 34.615 0.00 0.00 0.00 0.98
891 892 9.350951 TCGACTCCTCTCATGTTCTTATATAAA 57.649 33.333 0.00 0.00 0.00 1.40
901 902 9.851686 TCATGTTCTTATATAAATCCAAGCAGT 57.148 29.630 0.00 0.00 0.00 4.40
904 905 9.679661 TGTTCTTATATAAATCCAAGCAGTTCA 57.320 29.630 0.00 0.00 0.00 3.18
909 910 7.814264 ATATAAATCCAAGCAGTTCAGAAGG 57.186 36.000 0.00 0.00 0.00 3.46
910 911 1.831580 ATCCAAGCAGTTCAGAAGGC 58.168 50.000 0.00 0.00 0.00 4.35
911 912 0.250901 TCCAAGCAGTTCAGAAGGCC 60.251 55.000 0.00 0.00 0.00 5.19
912 913 1.580845 CCAAGCAGTTCAGAAGGCCG 61.581 60.000 0.00 0.00 0.00 6.13
913 914 0.886490 CAAGCAGTTCAGAAGGCCGT 60.886 55.000 0.00 0.00 0.00 5.68
914 915 0.603975 AAGCAGTTCAGAAGGCCGTC 60.604 55.000 11.15 11.15 0.00 4.79
915 916 1.004440 GCAGTTCAGAAGGCCGTCT 60.004 57.895 16.20 16.20 0.00 4.18
916 917 1.016653 GCAGTTCAGAAGGCCGTCTC 61.017 60.000 19.17 7.98 0.00 3.36
917 918 0.318441 CAGTTCAGAAGGCCGTCTCA 59.682 55.000 19.17 2.25 0.00 3.27
918 919 0.318762 AGTTCAGAAGGCCGTCTCAC 59.681 55.000 19.17 17.24 0.00 3.51
919 920 0.318762 GTTCAGAAGGCCGTCTCACT 59.681 55.000 19.17 0.00 0.00 3.41
920 921 0.603569 TTCAGAAGGCCGTCTCACTC 59.396 55.000 19.17 0.00 0.00 3.51
921 922 1.216710 CAGAAGGCCGTCTCACTCC 59.783 63.158 19.17 0.00 0.00 3.85
922 923 1.228894 AGAAGGCCGTCTCACTCCA 60.229 57.895 16.20 0.00 0.00 3.86
923 924 1.079750 GAAGGCCGTCTCACTCCAC 60.080 63.158 11.87 0.00 0.00 4.02
924 925 1.816863 GAAGGCCGTCTCACTCCACA 61.817 60.000 11.87 0.00 0.00 4.17
925 926 1.407656 AAGGCCGTCTCACTCCACAA 61.408 55.000 0.00 0.00 0.00 3.33
926 927 1.070786 GGCCGTCTCACTCCACAAA 59.929 57.895 0.00 0.00 0.00 2.83
927 928 0.951040 GGCCGTCTCACTCCACAAAG 60.951 60.000 0.00 0.00 0.00 2.77
928 929 0.951040 GCCGTCTCACTCCACAAAGG 60.951 60.000 0.00 0.00 39.47 3.11
929 930 0.951040 CCGTCTCACTCCACAAAGGC 60.951 60.000 0.00 0.00 37.29 4.35
930 931 0.249868 CGTCTCACTCCACAAAGGCA 60.250 55.000 0.00 0.00 37.29 4.75
931 932 1.609061 CGTCTCACTCCACAAAGGCAT 60.609 52.381 0.00 0.00 37.29 4.40
932 933 2.353704 CGTCTCACTCCACAAAGGCATA 60.354 50.000 0.00 0.00 37.29 3.14
933 934 3.679917 CGTCTCACTCCACAAAGGCATAT 60.680 47.826 0.00 0.00 37.29 1.78
934 935 3.873952 GTCTCACTCCACAAAGGCATATC 59.126 47.826 0.00 0.00 37.29 1.63
935 936 3.519107 TCTCACTCCACAAAGGCATATCA 59.481 43.478 0.00 0.00 37.29 2.15
936 937 3.609853 TCACTCCACAAAGGCATATCAC 58.390 45.455 0.00 0.00 37.29 3.06
937 938 3.264193 TCACTCCACAAAGGCATATCACT 59.736 43.478 0.00 0.00 37.29 3.41
938 939 4.469586 TCACTCCACAAAGGCATATCACTA 59.530 41.667 0.00 0.00 37.29 2.74
939 940 5.045942 TCACTCCACAAAGGCATATCACTAA 60.046 40.000 0.00 0.00 37.29 2.24
940 941 5.065218 CACTCCACAAAGGCATATCACTAAC 59.935 44.000 0.00 0.00 37.29 2.34
941 942 4.188462 TCCACAAAGGCATATCACTAACG 58.812 43.478 0.00 0.00 37.29 3.18
942 943 3.938963 CCACAAAGGCATATCACTAACGT 59.061 43.478 0.00 0.00 0.00 3.99
943 944 4.394920 CCACAAAGGCATATCACTAACGTT 59.605 41.667 5.88 5.88 0.00 3.99
944 945 5.583061 CCACAAAGGCATATCACTAACGTTA 59.417 40.000 7.94 7.94 0.00 3.18
945 946 6.092944 CCACAAAGGCATATCACTAACGTTAA 59.907 38.462 9.68 0.00 0.00 2.01
946 947 7.180079 CACAAAGGCATATCACTAACGTTAAG 58.820 38.462 9.68 5.36 0.00 1.85
947 948 6.877322 ACAAAGGCATATCACTAACGTTAAGT 59.123 34.615 9.68 6.99 0.00 2.24
948 949 8.036575 ACAAAGGCATATCACTAACGTTAAGTA 58.963 33.333 9.68 0.98 0.00 2.24
949 950 9.042008 CAAAGGCATATCACTAACGTTAAGTAT 57.958 33.333 9.68 5.49 0.00 2.12
950 951 9.609346 AAAGGCATATCACTAACGTTAAGTATT 57.391 29.630 9.68 4.02 0.00 1.89
970 971 5.931441 ATTAACACAGTGAAGTCTGAAGC 57.069 39.130 7.81 0.00 38.63 3.86
972 973 1.143305 CACAGTGAAGTCTGAAGCGG 58.857 55.000 0.00 0.00 38.63 5.52
976 977 1.412710 AGTGAAGTCTGAAGCGGTCAA 59.587 47.619 0.00 0.00 35.22 3.18
982 983 0.318441 TCTGAAGCGGTCAACTGAGG 59.682 55.000 0.00 0.00 35.22 3.86
987 988 1.215647 GCGGTCAACTGAGGTCGAT 59.784 57.895 0.00 0.00 0.00 3.59
994 995 2.095212 TCAACTGAGGTCGATCGTTCTG 60.095 50.000 15.94 15.97 0.00 3.02
996 997 0.526524 CTGAGGTCGATCGTTCTGCC 60.527 60.000 15.94 10.52 0.00 4.85
997 998 1.248101 TGAGGTCGATCGTTCTGCCA 61.248 55.000 15.94 6.42 0.00 4.92
998 999 0.103208 GAGGTCGATCGTTCTGCCAT 59.897 55.000 15.94 0.00 0.00 4.40
1022 1023 4.180946 CGCCTCCGTGGAGACTCG 62.181 72.222 17.52 12.77 44.53 4.18
1092 1093 1.074248 GATTCACCACCCCACCGTT 59.926 57.895 0.00 0.00 0.00 4.44
1126 1127 1.146774 TCCTTGGTTTCAGGCCATTCA 59.853 47.619 5.01 0.00 35.71 2.57
1132 1133 0.690192 TTTCAGGCCATTCACTCCGA 59.310 50.000 5.01 0.00 0.00 4.55
1134 1135 1.450312 CAGGCCATTCACTCCGACC 60.450 63.158 5.01 0.00 0.00 4.79
1150 1151 3.839490 TCCGACCCAGGTGAACTAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
1160 1161 7.696453 CCAGGTGAACTAAATTAAATTAGCACG 59.304 37.037 9.74 1.64 36.54 5.34
1164 1165 7.960738 GTGAACTAAATTAAATTAGCACGCAGA 59.039 33.333 9.74 0.00 36.54 4.26
1165 1166 7.960738 TGAACTAAATTAAATTAGCACGCAGAC 59.039 33.333 9.74 0.00 36.54 3.51
1166 1167 7.372451 ACTAAATTAAATTAGCACGCAGACA 57.628 32.000 9.74 0.00 36.54 3.41
1286 1359 7.332430 ACATATTTTCATGCAAAATGGACTGTG 59.668 33.333 18.30 4.86 43.38 3.66
1306 1379 1.653151 GAAGCATAACCTCGGACACC 58.347 55.000 0.00 0.00 0.00 4.16
1324 1397 1.808411 CCGTGCAGGTGTAAATGTCT 58.192 50.000 5.57 0.00 34.51 3.41
1325 1398 2.967362 CCGTGCAGGTGTAAATGTCTA 58.033 47.619 5.57 0.00 34.51 2.59
1327 1400 3.370978 CCGTGCAGGTGTAAATGTCTAAG 59.629 47.826 5.57 0.00 34.51 2.18
1329 1402 4.091509 CGTGCAGGTGTAAATGTCTAAGAC 59.908 45.833 0.00 0.00 0.00 3.01
1330 1403 4.994852 GTGCAGGTGTAAATGTCTAAGACA 59.005 41.667 0.00 0.00 46.90 3.41
1331 1404 5.120830 GTGCAGGTGTAAATGTCTAAGACAG 59.879 44.000 0.00 0.00 46.04 3.51
1333 1406 5.237815 CAGGTGTAAATGTCTAAGACAGCA 58.762 41.667 0.00 0.00 46.04 4.41
1335 1408 5.877012 AGGTGTAAATGTCTAAGACAGCATG 59.123 40.000 0.00 0.00 46.04 4.06
1347 1420 1.966762 CAGCATGTTTGGGGACACC 59.033 57.895 0.00 0.00 42.67 4.16
1362 1435 4.652421 GGGGACACCATGAGTACTAATGTA 59.348 45.833 17.50 0.00 39.85 2.29
1363 1436 5.307196 GGGGACACCATGAGTACTAATGTAT 59.693 44.000 17.50 4.27 39.85 2.29
1519 1593 4.263594 GGTTTGGACTACCACTATGGGAAA 60.264 45.833 0.00 0.00 46.80 3.13
1531 1605 5.762218 CCACTATGGGAAAGAGATCAATGAC 59.238 44.000 0.00 0.00 32.67 3.06
1553 1627 3.929955 TGCTGTGTGGGATTCATGATA 57.070 42.857 0.00 0.00 0.00 2.15
1566 1640 1.960689 TCATGATACCGGCGATGAAGA 59.039 47.619 9.30 0.00 0.00 2.87
1570 1644 1.389609 ATACCGGCGATGAAGACCGT 61.390 55.000 9.30 0.00 45.49 4.83
1588 1662 2.125512 GATCTTCACACGGCGGCT 60.126 61.111 13.24 0.00 0.00 5.52
1592 1666 2.664851 TTCACACGGCGGCTCTTG 60.665 61.111 13.24 1.69 0.00 3.02
1641 1721 6.183360 GGATTCAATGTTTCGCCAGGTATAAA 60.183 38.462 0.00 0.00 0.00 1.40
1669 1749 9.653287 AACATAATTAGAATCTCAAAGACGTGA 57.347 29.630 0.00 0.00 0.00 4.35
1859 1939 1.221414 GAAGAAACACTCAGCAGCGT 58.779 50.000 0.00 0.00 0.00 5.07
1886 1966 4.327680 GCTTACACAAAAGACCATCTCCT 58.672 43.478 0.00 0.00 0.00 3.69
1887 1967 4.393371 GCTTACACAAAAGACCATCTCCTC 59.607 45.833 0.00 0.00 0.00 3.71
1892 1972 1.645710 AAAGACCATCTCCTCCGTGT 58.354 50.000 0.00 0.00 0.00 4.49
1918 1998 3.555547 GGAGCAACAAACAATTTCACCAC 59.444 43.478 0.00 0.00 0.00 4.16
1920 2000 3.197549 AGCAACAAACAATTTCACCACCT 59.802 39.130 0.00 0.00 0.00 4.00
1932 2012 7.926555 ACAATTTCACCACCTATATTACTCGAG 59.073 37.037 11.84 11.84 0.00 4.04
1933 2013 6.401047 TTTCACCACCTATATTACTCGAGG 57.599 41.667 18.41 0.00 35.05 4.63
2076 2156 6.998968 AAGCTGGATTTCAGTATTCTTCAG 57.001 37.500 0.00 0.00 45.08 3.02
2118 2198 5.188988 TGAGGGCTCTTACTCTGTAAGTA 57.811 43.478 14.60 4.36 39.55 2.24
2122 2202 6.729428 AGGGCTCTTACTCTGTAAGTAACTA 58.271 40.000 14.60 0.00 43.89 2.24
2123 2203 7.355890 AGGGCTCTTACTCTGTAAGTAACTAT 58.644 38.462 14.60 0.27 43.89 2.12
2124 2204 8.501070 AGGGCTCTTACTCTGTAAGTAACTATA 58.499 37.037 14.60 0.00 43.89 1.31
2199 6619 4.202111 GGTGCAATTTATATTCCGCCACTT 60.202 41.667 0.00 0.00 33.15 3.16
2221 6641 4.357918 AACTCTAATGCCAGACACAACT 57.642 40.909 0.00 0.00 0.00 3.16
2246 6666 4.112634 TGCCCCTTAACTCTTGAAATGT 57.887 40.909 0.00 0.00 0.00 2.71
2263 6687 5.536916 TGAAATGTTTTTCATACCCTCCGTT 59.463 36.000 0.00 0.00 44.81 4.44
2267 6691 5.562635 TGTTTTTCATACCCTCCGTTGTAT 58.437 37.500 0.00 0.00 0.00 2.29
2492 6920 4.284746 AGCTACAGCACCTTAGAAGAAAGT 59.715 41.667 3.70 0.00 45.16 2.66
2501 6929 5.046231 CACCTTAGAAGAAAGTAGGCTCCTT 60.046 44.000 0.00 0.00 0.00 3.36
2523 6951 2.953466 CATGGCAATGGAAAGGTCTG 57.047 50.000 0.00 0.00 0.00 3.51
2531 6959 7.526041 TGGCAATGGAAAGGTCTGTATATATT 58.474 34.615 0.00 0.00 0.00 1.28
2625 7060 1.668826 TAGGTGGGATGAACAAGCCT 58.331 50.000 0.00 0.00 0.00 4.58
2785 7220 9.801714 CATGAACATGCTTAATTCAAGAAAAAC 57.198 29.630 1.84 0.00 36.03 2.43
2869 7307 1.329906 CTCTGAATCGCATGCAGGAAC 59.670 52.381 19.57 7.24 0.00 3.62
2944 7383 9.219603 TCATCAAGACTCTTCGTAAATTTGAAT 57.780 29.630 0.00 0.00 0.00 2.57
3014 7469 5.890334 TCTTAACTGTTGGCTTTGTTTCAG 58.110 37.500 2.69 0.00 0.00 3.02
3083 7542 5.259832 ACACCTATACTTACGAAGCTTCC 57.740 43.478 20.62 3.48 0.00 3.46
3217 9296 6.103330 TGCTACGAAATGCTACTACAATGAA 58.897 36.000 0.00 0.00 0.00 2.57
3237 9316 1.000274 AGCAAAATGGCGTGAGGAAAC 60.000 47.619 0.00 0.00 39.27 2.78
3256 9335 1.202486 ACCGACACACCTGTTACTGTG 60.202 52.381 2.34 2.34 42.98 3.66
3465 9545 9.973246 CTTACAACTGTAAATACATGTCATGTC 57.027 33.333 21.65 8.06 40.74 3.06
3651 9932 6.202331 TGTAATCCCTACATTCTCCTCAGAA 58.798 40.000 0.00 0.00 43.06 3.02
3653 9934 5.885449 ATCCCTACATTCTCCTCAGAAAG 57.115 43.478 0.00 0.00 42.14 2.62
3846 10128 6.384886 AGTTATTTAACCCGAGAAGGATACCA 59.615 38.462 0.00 0.00 40.87 3.25
3861 10163 3.556633 GGATACCATGGTCTCTGCATCAG 60.557 52.174 23.76 0.00 0.00 2.90
3925 10227 9.778741 GTATGATCACTCTTTTAATATGACCCA 57.221 33.333 0.00 0.00 0.00 4.51
3969 10271 3.722147 GAGAACAAGAACAGTGCTCTGA 58.278 45.455 21.96 0.00 43.76 3.27
4052 10354 5.477510 AGGAAGATGCATATAGAAAGCTCG 58.522 41.667 0.00 0.00 0.00 5.03
4157 10459 1.202758 AGGCAGTGGTGAATTCGACAA 60.203 47.619 0.04 0.00 0.00 3.18
4388 10693 7.864108 AATTGTACTATGTGCAAGCAGAATA 57.136 32.000 7.24 0.00 40.93 1.75
4486 10793 2.539432 TCTGGATCTGGAGAAGCTGA 57.461 50.000 0.00 0.00 0.00 4.26
4541 10848 1.658686 CTAGCCTCGCCGAGTCAGTT 61.659 60.000 13.83 0.00 0.00 3.16
4593 10900 8.738106 AGTAGAAACTGTGTATTGTACTAGGAC 58.262 37.037 0.00 0.00 34.85 3.85
4604 10911 2.964464 TGTACTAGGACCAACCGTTTGA 59.036 45.455 1.66 0.00 44.74 2.69
4649 10960 2.315925 GAGCCAGTCGATCAATTCCA 57.684 50.000 0.00 0.00 0.00 3.53
4683 11035 6.823182 CCTTTTATGGTGTCATGACATACTCA 59.177 38.462 30.10 23.46 43.97 3.41
4686 11038 2.236146 TGGTGTCATGACATACTCACCC 59.764 50.000 30.10 23.27 43.97 4.61
4752 11104 7.084486 GCTGACCGAGAAAAATAAAATCAGTT 58.916 34.615 0.00 0.00 34.79 3.16
4760 11112 5.722021 AAAATAAAATCAGTTGCCTCCGT 57.278 34.783 0.00 0.00 0.00 4.69
4761 11113 5.722021 AAATAAAATCAGTTGCCTCCGTT 57.278 34.783 0.00 0.00 0.00 4.44
4776 11129 2.868583 CTCCGTTACAGCTGGATTCATG 59.131 50.000 19.93 0.00 0.00 3.07
4791 11144 7.524532 GCTGGATTCATGTAAGTGCTAGATCTA 60.525 40.741 1.69 1.69 0.00 1.98
4804 11157 7.346471 AGTGCTAGATCTAGGATCTCTATTCC 58.654 42.308 27.21 11.94 35.96 3.01
4826 11179 4.360563 CTCACAACAAGAAGTGTCGTAGT 58.639 43.478 0.00 0.00 40.60 2.73
4883 11236 3.796764 TGTCACAACACCTGCATCA 57.203 47.368 0.00 0.00 0.00 3.07
4884 11237 2.275134 TGTCACAACACCTGCATCAT 57.725 45.000 0.00 0.00 0.00 2.45
4885 11238 1.881324 TGTCACAACACCTGCATCATG 59.119 47.619 0.00 0.00 0.00 3.07
4886 11239 1.200716 GTCACAACACCTGCATCATGG 59.799 52.381 0.00 0.00 0.00 3.66
4887 11240 1.073603 TCACAACACCTGCATCATGGA 59.926 47.619 0.00 0.00 0.00 3.41
4888 11241 1.887854 CACAACACCTGCATCATGGAA 59.112 47.619 0.00 0.00 0.00 3.53
4889 11242 2.296752 CACAACACCTGCATCATGGAAA 59.703 45.455 0.00 0.00 0.00 3.13
4891 11244 3.243839 ACAACACCTGCATCATGGAAAAC 60.244 43.478 0.00 0.00 0.00 2.43
4892 11245 2.596346 ACACCTGCATCATGGAAAACA 58.404 42.857 0.00 0.00 0.00 2.83
4937 11546 3.068590 CACTGGCAAGGACAAAGAAATGT 59.931 43.478 0.00 0.00 35.90 2.71
4946 11555 6.655078 AGGACAAAGAAATGTATTTGCAGT 57.345 33.333 2.82 0.00 39.14 4.40
4987 11596 8.997323 TGGAAGCATAAAACCAAAATATTTGTG 58.003 29.630 0.39 2.93 0.00 3.33
5029 11638 6.090898 GTGCGAATACTCATGAGTAAACAACT 59.909 38.462 33.30 17.10 45.87 3.16
5052 11661 2.425124 CGTCCGCACTTGCAAACG 60.425 61.111 0.00 2.27 42.21 3.60
5075 11684 5.289595 GTTGGAACATCGTATAGAGCATCA 58.710 41.667 0.00 0.00 39.30 3.07
5097 11706 5.557891 AAGAAATCTTGATTTCTCTGGCG 57.442 39.130 28.10 0.00 46.69 5.69
5122 11731 5.533528 TCTCATTATCAACAATGGAGGCATG 59.466 40.000 0.00 0.00 36.69 4.06
5124 11733 5.300034 TCATTATCAACAATGGAGGCATGAC 59.700 40.000 0.00 0.00 36.69 3.06
5166 14138 3.057969 TCGACCATGAATTCAGCTTGT 57.942 42.857 14.54 7.83 0.00 3.16
5168 14140 2.743664 CGACCATGAATTCAGCTTGTCA 59.256 45.455 14.54 0.00 0.00 3.58
5190 14162 2.669133 CCCGGTTGAGCCAGATCCA 61.669 63.158 0.00 0.00 36.97 3.41
5258 14230 4.591929 TCATTGGCATGAACTTGAGATCA 58.408 39.130 0.00 0.00 36.41 2.92
5260 14232 3.708403 TGGCATGAACTTGAGATCAGT 57.292 42.857 0.00 0.00 30.38 3.41
5305 14277 2.371510 GCATCAGGCTTAGGGAAGAGAT 59.628 50.000 0.00 0.00 40.25 2.75
5308 14280 1.135960 AGGCTTAGGGAAGAGATGCC 58.864 55.000 0.00 0.00 40.55 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.524318 ACCCTAATCGCACCGCCG 62.524 66.667 0.00 0.00 0.00 6.46
12 13 2.895372 CACCCTAATCGCACCGCC 60.895 66.667 0.00 0.00 0.00 6.13
13 14 2.895372 CCACCCTAATCGCACCGC 60.895 66.667 0.00 0.00 0.00 5.68
14 15 2.895372 GCCACCCTAATCGCACCG 60.895 66.667 0.00 0.00 0.00 4.94
15 16 2.516225 GGCCACCCTAATCGCACC 60.516 66.667 0.00 0.00 0.00 5.01
16 17 2.516225 GGGCCACCCTAATCGCAC 60.516 66.667 4.39 0.00 41.34 5.34
496 497 8.611654 AAAGCGGTTAATCTACTAGACAAAAA 57.388 30.769 0.00 0.00 0.00 1.94
497 498 8.611654 AAAAGCGGTTAATCTACTAGACAAAA 57.388 30.769 0.00 0.00 0.00 2.44
498 499 8.611654 AAAAAGCGGTTAATCTACTAGACAAA 57.388 30.769 0.00 0.00 0.00 2.83
520 521 6.378564 TGCGGAATATTGTTATCCCTGAAAAA 59.621 34.615 0.00 0.00 0.00 1.94
521 522 5.888724 TGCGGAATATTGTTATCCCTGAAAA 59.111 36.000 0.00 0.00 0.00 2.29
522 523 5.441500 TGCGGAATATTGTTATCCCTGAAA 58.558 37.500 0.00 0.00 0.00 2.69
523 524 5.042463 TGCGGAATATTGTTATCCCTGAA 57.958 39.130 0.00 0.00 0.00 3.02
524 525 4.698201 TGCGGAATATTGTTATCCCTGA 57.302 40.909 0.00 0.00 0.00 3.86
525 526 5.964958 ATTGCGGAATATTGTTATCCCTG 57.035 39.130 0.00 0.00 0.00 4.45
526 527 8.472007 TTTTATTGCGGAATATTGTTATCCCT 57.528 30.769 10.35 0.00 0.00 4.20
527 528 9.705290 ATTTTTATTGCGGAATATTGTTATCCC 57.295 29.630 10.35 0.00 0.00 3.85
540 541 9.944663 GTATGAGAAATACATTTTTATTGCGGA 57.055 29.630 0.00 0.00 0.00 5.54
541 542 9.729023 TGTATGAGAAATACATTTTTATTGCGG 57.271 29.630 0.00 0.00 30.34 5.69
665 666 7.975616 GCCATTGTTACACTATTTGACATGATT 59.024 33.333 0.00 0.00 0.00 2.57
666 667 7.340232 AGCCATTGTTACACTATTTGACATGAT 59.660 33.333 0.00 0.00 0.00 2.45
667 668 6.658816 AGCCATTGTTACACTATTTGACATGA 59.341 34.615 0.00 0.00 0.00 3.07
668 669 6.855836 AGCCATTGTTACACTATTTGACATG 58.144 36.000 0.00 0.00 0.00 3.21
669 670 7.466746 AAGCCATTGTTACACTATTTGACAT 57.533 32.000 0.00 0.00 0.00 3.06
670 671 6.892658 AAGCCATTGTTACACTATTTGACA 57.107 33.333 0.00 0.00 0.00 3.58
671 672 9.855021 AATAAAGCCATTGTTACACTATTTGAC 57.145 29.630 0.00 0.00 0.00 3.18
672 673 9.853555 CAATAAAGCCATTGTTACACTATTTGA 57.146 29.630 0.00 0.00 32.33 2.69
673 674 9.086336 CCAATAAAGCCATTGTTACACTATTTG 57.914 33.333 0.00 0.00 34.67 2.32
674 675 8.811994 ACCAATAAAGCCATTGTTACACTATTT 58.188 29.630 0.00 0.00 34.67 1.40
675 676 8.361169 ACCAATAAAGCCATTGTTACACTATT 57.639 30.769 0.00 0.00 34.67 1.73
676 677 7.954666 ACCAATAAAGCCATTGTTACACTAT 57.045 32.000 0.00 0.00 34.67 2.12
677 678 8.104566 ACTACCAATAAAGCCATTGTTACACTA 58.895 33.333 0.00 0.00 34.67 2.74
678 679 6.946009 ACTACCAATAAAGCCATTGTTACACT 59.054 34.615 0.00 0.00 34.67 3.55
679 680 7.027161 CACTACCAATAAAGCCATTGTTACAC 58.973 38.462 0.00 0.00 34.67 2.90
680 681 6.943146 TCACTACCAATAAAGCCATTGTTACA 59.057 34.615 3.46 0.00 34.67 2.41
681 682 7.248437 GTCACTACCAATAAAGCCATTGTTAC 58.752 38.462 3.46 0.00 34.67 2.50
682 683 6.092944 CGTCACTACCAATAAAGCCATTGTTA 59.907 38.462 3.46 0.00 34.67 2.41
683 684 5.106317 CGTCACTACCAATAAAGCCATTGTT 60.106 40.000 3.46 0.00 34.67 2.83
684 685 4.394920 CGTCACTACCAATAAAGCCATTGT 59.605 41.667 3.46 0.00 34.67 2.71
685 686 4.634004 TCGTCACTACCAATAAAGCCATTG 59.366 41.667 0.00 0.00 35.97 2.82
686 687 4.634443 GTCGTCACTACCAATAAAGCCATT 59.366 41.667 0.00 0.00 0.00 3.16
687 688 4.189231 GTCGTCACTACCAATAAAGCCAT 58.811 43.478 0.00 0.00 0.00 4.40
688 689 3.007074 TGTCGTCACTACCAATAAAGCCA 59.993 43.478 0.00 0.00 0.00 4.75
689 690 3.592059 TGTCGTCACTACCAATAAAGCC 58.408 45.455 0.00 0.00 0.00 4.35
690 691 5.808540 TGTATGTCGTCACTACCAATAAAGC 59.191 40.000 0.00 0.00 0.00 3.51
691 692 7.704899 TGATGTATGTCGTCACTACCAATAAAG 59.295 37.037 0.00 0.00 37.18 1.85
692 693 7.548967 TGATGTATGTCGTCACTACCAATAAA 58.451 34.615 0.00 0.00 37.18 1.40
693 694 7.102847 TGATGTATGTCGTCACTACCAATAA 57.897 36.000 0.00 0.00 37.18 1.40
694 695 6.702716 TGATGTATGTCGTCACTACCAATA 57.297 37.500 0.00 0.00 37.18 1.90
695 696 5.592104 TGATGTATGTCGTCACTACCAAT 57.408 39.130 0.00 0.00 37.18 3.16
696 697 5.592104 ATGATGTATGTCGTCACTACCAA 57.408 39.130 0.00 0.00 43.67 3.67
697 698 5.105513 ACAATGATGTATGTCGTCACTACCA 60.106 40.000 0.00 0.00 43.67 3.25
698 699 5.348986 ACAATGATGTATGTCGTCACTACC 58.651 41.667 0.00 0.00 43.67 3.18
699 700 6.237835 CCAACAATGATGTATGTCGTCACTAC 60.238 42.308 0.00 0.00 43.67 2.73
700 701 5.810074 CCAACAATGATGTATGTCGTCACTA 59.190 40.000 0.00 0.00 43.67 2.74
701 702 4.631377 CCAACAATGATGTATGTCGTCACT 59.369 41.667 0.00 0.00 43.67 3.41
702 703 4.727734 GCCAACAATGATGTATGTCGTCAC 60.728 45.833 0.00 0.00 43.67 3.67
703 704 3.373748 GCCAACAATGATGTATGTCGTCA 59.626 43.478 0.00 0.00 44.76 4.35
704 705 3.623060 AGCCAACAATGATGTATGTCGTC 59.377 43.478 0.00 0.00 39.40 4.20
705 706 3.374988 CAGCCAACAATGATGTATGTCGT 59.625 43.478 0.00 0.00 39.40 4.34
706 707 3.789791 GCAGCCAACAATGATGTATGTCG 60.790 47.826 0.00 0.00 39.40 4.35
707 708 3.129113 TGCAGCCAACAATGATGTATGTC 59.871 43.478 0.00 0.00 39.40 3.06
708 709 3.090790 TGCAGCCAACAATGATGTATGT 58.909 40.909 0.00 0.00 39.40 2.29
709 710 3.702330 CTGCAGCCAACAATGATGTATG 58.298 45.455 0.00 0.00 39.40 2.39
710 711 2.100252 GCTGCAGCCAACAATGATGTAT 59.900 45.455 28.76 0.00 35.01 2.29
711 712 1.473677 GCTGCAGCCAACAATGATGTA 59.526 47.619 28.76 0.00 35.01 2.29
712 713 0.245539 GCTGCAGCCAACAATGATGT 59.754 50.000 28.76 0.00 36.78 3.06
713 714 0.800683 CGCTGCAGCCAACAATGATG 60.801 55.000 32.07 10.73 37.91 3.07
714 715 1.509463 CGCTGCAGCCAACAATGAT 59.491 52.632 32.07 0.00 37.91 2.45
715 716 2.956194 CGCTGCAGCCAACAATGA 59.044 55.556 32.07 0.00 37.91 2.57
716 717 2.758770 AAGCGCTGCAGCCAACAATG 62.759 55.000 32.07 17.36 37.91 2.82
717 718 2.482296 GAAGCGCTGCAGCCAACAAT 62.482 55.000 32.07 14.66 37.91 2.71
718 719 3.198236 GAAGCGCTGCAGCCAACAA 62.198 57.895 32.07 0.00 37.91 2.83
719 720 3.663176 GAAGCGCTGCAGCCAACA 61.663 61.111 32.07 0.00 37.91 3.33
720 721 2.862347 GATGAAGCGCTGCAGCCAAC 62.862 60.000 32.07 21.35 37.91 3.77
721 722 2.674033 ATGAAGCGCTGCAGCCAA 60.674 55.556 32.07 13.88 37.91 4.52
722 723 3.129502 GATGAAGCGCTGCAGCCA 61.130 61.111 32.07 23.64 37.91 4.75
723 724 2.693762 TTGATGAAGCGCTGCAGCC 61.694 57.895 29.92 23.65 37.91 4.85
724 725 1.513586 GTTGATGAAGCGCTGCAGC 60.514 57.895 26.87 26.87 37.78 5.25
725 726 0.450583 ATGTTGATGAAGCGCTGCAG 59.549 50.000 25.01 10.11 0.00 4.41
726 727 1.398041 GTATGTTGATGAAGCGCTGCA 59.602 47.619 23.07 23.07 0.00 4.41
727 728 1.667724 AGTATGTTGATGAAGCGCTGC 59.332 47.619 12.58 10.71 0.00 5.25
728 729 5.438117 CATTAGTATGTTGATGAAGCGCTG 58.562 41.667 12.58 0.00 0.00 5.18
729 730 4.512944 CCATTAGTATGTTGATGAAGCGCT 59.487 41.667 2.64 2.64 0.00 5.92
730 731 4.511454 TCCATTAGTATGTTGATGAAGCGC 59.489 41.667 0.00 0.00 0.00 5.92
731 732 5.333645 GCTCCATTAGTATGTTGATGAAGCG 60.334 44.000 0.00 0.00 0.00 4.68
732 733 5.762218 AGCTCCATTAGTATGTTGATGAAGC 59.238 40.000 0.00 0.00 0.00 3.86
733 734 7.281774 ACAAGCTCCATTAGTATGTTGATGAAG 59.718 37.037 0.00 0.00 0.00 3.02
734 735 7.112122 ACAAGCTCCATTAGTATGTTGATGAA 58.888 34.615 0.00 0.00 0.00 2.57
735 736 6.653020 ACAAGCTCCATTAGTATGTTGATGA 58.347 36.000 0.00 0.00 0.00 2.92
736 737 6.932356 ACAAGCTCCATTAGTATGTTGATG 57.068 37.500 0.00 0.00 0.00 3.07
737 738 6.708054 GCTACAAGCTCCATTAGTATGTTGAT 59.292 38.462 0.00 0.00 38.45 2.57
738 739 6.049149 GCTACAAGCTCCATTAGTATGTTGA 58.951 40.000 0.00 0.00 38.45 3.18
739 740 6.292389 GCTACAAGCTCCATTAGTATGTTG 57.708 41.667 0.00 0.00 38.45 3.33
754 755 4.036380 ACTTTGTTAACACCAGCTACAAGC 59.964 41.667 8.07 0.00 42.84 4.01
755 756 5.751243 ACTTTGTTAACACCAGCTACAAG 57.249 39.130 8.07 9.09 31.19 3.16
756 757 5.648526 TGAACTTTGTTAACACCAGCTACAA 59.351 36.000 8.07 0.00 0.00 2.41
757 758 5.186942 TGAACTTTGTTAACACCAGCTACA 58.813 37.500 8.07 6.14 0.00 2.74
758 759 5.526111 TCTGAACTTTGTTAACACCAGCTAC 59.474 40.000 8.07 3.89 0.00 3.58
759 760 5.676552 TCTGAACTTTGTTAACACCAGCTA 58.323 37.500 8.07 0.00 0.00 3.32
760 761 4.523083 TCTGAACTTTGTTAACACCAGCT 58.477 39.130 8.07 0.00 0.00 4.24
761 762 4.574828 TCTCTGAACTTTGTTAACACCAGC 59.425 41.667 8.07 0.00 0.00 4.85
762 763 5.817816 ACTCTCTGAACTTTGTTAACACCAG 59.182 40.000 8.07 9.91 0.00 4.00
763 764 5.741011 ACTCTCTGAACTTTGTTAACACCA 58.259 37.500 8.07 0.00 0.00 4.17
764 765 6.539103 AGAACTCTCTGAACTTTGTTAACACC 59.461 38.462 8.07 0.00 0.00 4.16
765 766 7.254488 GGAGAACTCTCTGAACTTTGTTAACAC 60.254 40.741 8.07 0.00 42.48 3.32
766 767 6.761714 GGAGAACTCTCTGAACTTTGTTAACA 59.238 38.462 3.59 3.59 42.48 2.41
767 768 6.987404 AGGAGAACTCTCTGAACTTTGTTAAC 59.013 38.462 6.68 0.00 42.48 2.01
768 769 6.986817 CAGGAGAACTCTCTGAACTTTGTTAA 59.013 38.462 6.68 0.00 42.48 2.01
769 770 6.323996 TCAGGAGAACTCTCTGAACTTTGTTA 59.676 38.462 15.28 0.00 42.48 2.41
770 771 5.129485 TCAGGAGAACTCTCTGAACTTTGTT 59.871 40.000 15.28 0.00 42.48 2.83
771 772 4.651503 TCAGGAGAACTCTCTGAACTTTGT 59.348 41.667 15.28 0.00 42.48 2.83
772 773 5.207110 TCAGGAGAACTCTCTGAACTTTG 57.793 43.478 15.28 0.00 42.48 2.77
773 774 5.878406 TTCAGGAGAACTCTCTGAACTTT 57.122 39.130 20.59 0.00 39.57 2.66
774 775 5.878406 TTTCAGGAGAACTCTCTGAACTT 57.122 39.130 22.47 0.00 41.74 2.66
775 776 7.546250 TTATTTCAGGAGAACTCTCTGAACT 57.454 36.000 22.47 20.52 41.74 3.01
776 777 8.608844 TTTTATTTCAGGAGAACTCTCTGAAC 57.391 34.615 22.47 3.10 41.74 3.18
777 778 9.442047 GATTTTATTTCAGGAGAACTCTCTGAA 57.558 33.333 20.59 20.59 41.07 3.02
778 779 8.820831 AGATTTTATTTCAGGAGAACTCTCTGA 58.179 33.333 14.31 14.31 42.48 3.27
781 782 9.877178 TGTAGATTTTATTTCAGGAGAACTCTC 57.123 33.333 0.00 0.00 42.14 3.20
784 785 9.454859 CCTTGTAGATTTTATTTCAGGAGAACT 57.545 33.333 0.00 0.00 32.39 3.01
785 786 8.184848 GCCTTGTAGATTTTATTTCAGGAGAAC 58.815 37.037 0.00 0.00 32.39 3.01
786 787 8.109634 AGCCTTGTAGATTTTATTTCAGGAGAA 58.890 33.333 0.00 0.00 0.00 2.87
787 788 7.633789 AGCCTTGTAGATTTTATTTCAGGAGA 58.366 34.615 0.00 0.00 0.00 3.71
788 789 7.254590 CGAGCCTTGTAGATTTTATTTCAGGAG 60.255 40.741 0.00 0.00 0.00 3.69
789 790 6.538742 CGAGCCTTGTAGATTTTATTTCAGGA 59.461 38.462 0.00 0.00 0.00 3.86
790 791 6.538742 TCGAGCCTTGTAGATTTTATTTCAGG 59.461 38.462 0.00 0.00 0.00 3.86
791 792 7.539712 TCGAGCCTTGTAGATTTTATTTCAG 57.460 36.000 0.00 0.00 0.00 3.02
792 793 7.606456 AGTTCGAGCCTTGTAGATTTTATTTCA 59.394 33.333 0.00 0.00 0.00 2.69
793 794 7.975750 AGTTCGAGCCTTGTAGATTTTATTTC 58.024 34.615 0.00 0.00 0.00 2.17
794 795 7.923414 AGTTCGAGCCTTGTAGATTTTATTT 57.077 32.000 0.00 0.00 0.00 1.40
795 796 7.923414 AAGTTCGAGCCTTGTAGATTTTATT 57.077 32.000 0.00 0.00 0.00 1.40
796 797 8.880750 GTTAAGTTCGAGCCTTGTAGATTTTAT 58.119 33.333 9.07 0.00 0.00 1.40
797 798 8.092687 AGTTAAGTTCGAGCCTTGTAGATTTTA 58.907 33.333 9.07 0.00 0.00 1.52
798 799 6.935208 AGTTAAGTTCGAGCCTTGTAGATTTT 59.065 34.615 9.07 0.00 0.00 1.82
799 800 6.369065 CAGTTAAGTTCGAGCCTTGTAGATTT 59.631 38.462 9.07 0.00 0.00 2.17
800 801 5.869888 CAGTTAAGTTCGAGCCTTGTAGATT 59.130 40.000 9.07 0.00 0.00 2.40
801 802 5.411781 CAGTTAAGTTCGAGCCTTGTAGAT 58.588 41.667 9.07 0.00 0.00 1.98
802 803 4.321750 CCAGTTAAGTTCGAGCCTTGTAGA 60.322 45.833 9.07 0.00 0.00 2.59
803 804 3.927142 CCAGTTAAGTTCGAGCCTTGTAG 59.073 47.826 9.07 0.00 0.00 2.74
804 805 3.863400 GCCAGTTAAGTTCGAGCCTTGTA 60.863 47.826 9.07 0.00 0.00 2.41
805 806 2.767505 CCAGTTAAGTTCGAGCCTTGT 58.232 47.619 9.07 0.00 0.00 3.16
806 807 1.464997 GCCAGTTAAGTTCGAGCCTTG 59.535 52.381 9.07 0.00 0.00 3.61
807 808 1.348036 AGCCAGTTAAGTTCGAGCCTT 59.652 47.619 0.00 0.01 0.00 4.35
808 809 0.977395 AGCCAGTTAAGTTCGAGCCT 59.023 50.000 0.00 0.00 0.00 4.58
809 810 2.541556 CTAGCCAGTTAAGTTCGAGCC 58.458 52.381 0.00 0.00 0.00 4.70
810 811 2.541556 CCTAGCCAGTTAAGTTCGAGC 58.458 52.381 0.00 0.00 0.00 5.03
811 812 2.541556 GCCTAGCCAGTTAAGTTCGAG 58.458 52.381 0.00 0.00 0.00 4.04
812 813 2.667473 GCCTAGCCAGTTAAGTTCGA 57.333 50.000 0.00 0.00 0.00 3.71
825 826 2.678336 GTGTCATACTTTGTGGCCTAGC 59.322 50.000 3.32 0.00 0.00 3.42
826 827 2.930040 CGTGTCATACTTTGTGGCCTAG 59.070 50.000 3.32 0.00 0.00 3.02
827 828 2.300723 ACGTGTCATACTTTGTGGCCTA 59.699 45.455 3.32 0.00 0.00 3.93
828 829 1.071699 ACGTGTCATACTTTGTGGCCT 59.928 47.619 3.32 0.00 0.00 5.19
829 830 1.519408 ACGTGTCATACTTTGTGGCC 58.481 50.000 0.00 0.00 0.00 5.36
830 831 2.289547 ACAACGTGTCATACTTTGTGGC 59.710 45.455 0.00 0.00 46.29 5.01
834 835 6.577055 CCATGTAAACAACGTGTCATACTTTG 59.423 38.462 0.00 0.00 42.63 2.77
835 836 6.261381 ACCATGTAAACAACGTGTCATACTTT 59.739 34.615 0.00 0.00 42.63 2.66
836 837 5.761234 ACCATGTAAACAACGTGTCATACTT 59.239 36.000 0.00 0.00 42.63 2.24
837 838 5.178623 CACCATGTAAACAACGTGTCATACT 59.821 40.000 0.00 0.00 42.63 2.12
838 839 5.049954 ACACCATGTAAACAACGTGTCATAC 60.050 40.000 10.93 0.00 42.63 2.39
839 840 5.057819 ACACCATGTAAACAACGTGTCATA 58.942 37.500 10.93 0.00 42.63 2.15
840 841 3.880490 ACACCATGTAAACAACGTGTCAT 59.120 39.130 10.93 0.00 42.63 3.06
841 842 3.271729 ACACCATGTAAACAACGTGTCA 58.728 40.909 10.93 0.00 42.63 3.58
842 843 3.303526 GGACACCATGTAAACAACGTGTC 60.304 47.826 24.13 24.13 46.72 3.67
843 844 2.614983 GGACACCATGTAAACAACGTGT 59.385 45.455 14.75 14.75 42.63 4.49
844 845 2.875933 AGGACACCATGTAAACAACGTG 59.124 45.455 9.95 9.95 43.61 4.49
845 846 3.135994 GAGGACACCATGTAAACAACGT 58.864 45.455 0.00 0.00 0.00 3.99
846 847 2.156891 CGAGGACACCATGTAAACAACG 59.843 50.000 0.00 0.00 0.00 4.10
847 848 3.185797 GTCGAGGACACCATGTAAACAAC 59.814 47.826 0.00 0.00 32.09 3.32
848 849 3.070446 AGTCGAGGACACCATGTAAACAA 59.930 43.478 0.00 0.00 34.60 2.83
849 850 2.631062 AGTCGAGGACACCATGTAAACA 59.369 45.455 0.00 0.00 34.60 2.83
850 851 3.251571 GAGTCGAGGACACCATGTAAAC 58.748 50.000 0.00 0.00 34.60 2.01
851 852 2.232941 GGAGTCGAGGACACCATGTAAA 59.767 50.000 7.26 0.00 41.69 2.01
852 853 1.822990 GGAGTCGAGGACACCATGTAA 59.177 52.381 7.26 0.00 41.69 2.41
853 854 1.005569 AGGAGTCGAGGACACCATGTA 59.994 52.381 13.42 0.00 43.89 2.29
854 855 0.251832 AGGAGTCGAGGACACCATGT 60.252 55.000 13.42 0.00 43.89 3.21
855 856 0.457851 GAGGAGTCGAGGACACCATG 59.542 60.000 13.42 0.00 43.89 3.66
856 857 0.333312 AGAGGAGTCGAGGACACCAT 59.667 55.000 13.42 0.81 43.89 3.55
857 858 0.322636 GAGAGGAGTCGAGGACACCA 60.323 60.000 13.42 0.00 43.89 4.17
858 859 0.322636 TGAGAGGAGTCGAGGACACC 60.323 60.000 4.33 4.33 42.25 4.16
859 860 1.403679 CATGAGAGGAGTCGAGGACAC 59.596 57.143 0.00 0.00 34.60 3.67
860 861 1.004862 ACATGAGAGGAGTCGAGGACA 59.995 52.381 0.00 0.00 34.60 4.02
861 862 1.757682 ACATGAGAGGAGTCGAGGAC 58.242 55.000 0.00 0.00 0.00 3.85
862 863 2.025793 AGAACATGAGAGGAGTCGAGGA 60.026 50.000 0.00 0.00 0.00 3.71
863 864 2.374184 AGAACATGAGAGGAGTCGAGG 58.626 52.381 0.00 0.00 0.00 4.63
864 865 5.766150 ATAAGAACATGAGAGGAGTCGAG 57.234 43.478 0.00 0.00 0.00 4.04
865 866 8.919777 TTATATAAGAACATGAGAGGAGTCGA 57.080 34.615 0.00 0.00 0.00 4.20
875 876 9.851686 ACTGCTTGGATTTATATAAGAACATGA 57.148 29.630 0.00 0.00 0.00 3.07
878 879 9.679661 TGAACTGCTTGGATTTATATAAGAACA 57.320 29.630 0.00 0.00 0.00 3.18
883 884 9.342308 CCTTCTGAACTGCTTGGATTTATATAA 57.658 33.333 0.00 0.00 0.00 0.98
884 885 7.445402 GCCTTCTGAACTGCTTGGATTTATATA 59.555 37.037 1.09 0.00 0.00 0.86
885 886 6.264067 GCCTTCTGAACTGCTTGGATTTATAT 59.736 38.462 1.09 0.00 0.00 0.86
886 887 5.590259 GCCTTCTGAACTGCTTGGATTTATA 59.410 40.000 1.09 0.00 0.00 0.98
887 888 4.400567 GCCTTCTGAACTGCTTGGATTTAT 59.599 41.667 1.09 0.00 0.00 1.40
888 889 3.758554 GCCTTCTGAACTGCTTGGATTTA 59.241 43.478 1.09 0.00 0.00 1.40
889 890 2.560105 GCCTTCTGAACTGCTTGGATTT 59.440 45.455 1.09 0.00 0.00 2.17
890 891 2.165998 GCCTTCTGAACTGCTTGGATT 58.834 47.619 1.09 0.00 0.00 3.01
891 892 1.615384 GGCCTTCTGAACTGCTTGGAT 60.615 52.381 0.00 0.00 0.00 3.41
892 893 0.250901 GGCCTTCTGAACTGCTTGGA 60.251 55.000 0.00 0.00 0.00 3.53
893 894 1.580845 CGGCCTTCTGAACTGCTTGG 61.581 60.000 0.00 0.00 0.00 3.61
894 895 0.886490 ACGGCCTTCTGAACTGCTTG 60.886 55.000 0.00 3.93 0.00 4.01
895 896 0.603975 GACGGCCTTCTGAACTGCTT 60.604 55.000 0.00 0.00 0.00 3.91
896 897 1.004440 GACGGCCTTCTGAACTGCT 60.004 57.895 0.00 0.00 0.00 4.24
897 898 1.004440 AGACGGCCTTCTGAACTGC 60.004 57.895 11.65 0.00 0.00 4.40
898 899 0.318441 TGAGACGGCCTTCTGAACTG 59.682 55.000 17.88 0.00 0.00 3.16
899 900 0.318762 GTGAGACGGCCTTCTGAACT 59.681 55.000 17.88 0.00 0.00 3.01
900 901 0.318762 AGTGAGACGGCCTTCTGAAC 59.681 55.000 17.88 14.19 0.00 3.18
901 902 0.603569 GAGTGAGACGGCCTTCTGAA 59.396 55.000 17.88 1.51 0.00 3.02
902 903 1.251527 GGAGTGAGACGGCCTTCTGA 61.252 60.000 17.88 5.14 0.00 3.27
903 904 1.216710 GGAGTGAGACGGCCTTCTG 59.783 63.158 17.88 0.00 0.00 3.02
904 905 1.228894 TGGAGTGAGACGGCCTTCT 60.229 57.895 12.35 12.35 0.00 2.85
905 906 1.079750 GTGGAGTGAGACGGCCTTC 60.080 63.158 0.00 0.00 0.00 3.46
906 907 1.407656 TTGTGGAGTGAGACGGCCTT 61.408 55.000 0.00 0.00 0.00 4.35
907 908 1.407656 TTTGTGGAGTGAGACGGCCT 61.408 55.000 0.00 0.00 0.00 5.19
908 909 0.951040 CTTTGTGGAGTGAGACGGCC 60.951 60.000 0.00 0.00 0.00 6.13
909 910 0.951040 CCTTTGTGGAGTGAGACGGC 60.951 60.000 0.00 0.00 38.35 5.68
910 911 0.951040 GCCTTTGTGGAGTGAGACGG 60.951 60.000 0.00 0.00 38.35 4.79
911 912 0.249868 TGCCTTTGTGGAGTGAGACG 60.250 55.000 0.00 0.00 38.35 4.18
912 913 2.191128 ATGCCTTTGTGGAGTGAGAC 57.809 50.000 0.00 0.00 38.35 3.36
913 914 3.519107 TGATATGCCTTTGTGGAGTGAGA 59.481 43.478 0.00 0.00 38.35 3.27
914 915 3.624861 GTGATATGCCTTTGTGGAGTGAG 59.375 47.826 0.00 0.00 38.35 3.51
915 916 3.264193 AGTGATATGCCTTTGTGGAGTGA 59.736 43.478 0.00 0.00 38.35 3.41
916 917 3.614092 AGTGATATGCCTTTGTGGAGTG 58.386 45.455 0.00 0.00 38.35 3.51
917 918 5.186198 GTTAGTGATATGCCTTTGTGGAGT 58.814 41.667 0.00 0.00 38.35 3.85
918 919 4.271049 CGTTAGTGATATGCCTTTGTGGAG 59.729 45.833 0.00 0.00 38.35 3.86
919 920 4.188462 CGTTAGTGATATGCCTTTGTGGA 58.812 43.478 0.00 0.00 38.35 4.02
920 921 3.938963 ACGTTAGTGATATGCCTTTGTGG 59.061 43.478 0.00 0.00 39.35 4.17
921 922 5.545658 AACGTTAGTGATATGCCTTTGTG 57.454 39.130 0.00 0.00 0.00 3.33
922 923 6.877322 ACTTAACGTTAGTGATATGCCTTTGT 59.123 34.615 8.23 0.00 0.00 2.83
923 924 7.303634 ACTTAACGTTAGTGATATGCCTTTG 57.696 36.000 8.23 0.00 0.00 2.77
924 925 9.609346 AATACTTAACGTTAGTGATATGCCTTT 57.391 29.630 8.23 0.00 0.00 3.11
932 933 9.918630 ACTGTGTTAATACTTAACGTTAGTGAT 57.081 29.630 8.23 0.58 46.53 3.06
933 934 9.184062 CACTGTGTTAATACTTAACGTTAGTGA 57.816 33.333 21.10 0.00 46.53 3.41
934 935 9.184062 TCACTGTGTTAATACTTAACGTTAGTG 57.816 33.333 20.43 20.43 46.53 2.74
935 936 9.748708 TTCACTGTGTTAATACTTAACGTTAGT 57.251 29.630 8.23 11.01 46.53 2.24
937 938 9.748708 ACTTCACTGTGTTAATACTTAACGTTA 57.251 29.630 3.29 3.29 46.53 3.18
938 939 8.652810 ACTTCACTGTGTTAATACTTAACGTT 57.347 30.769 5.88 5.88 46.53 3.99
939 940 8.139989 AGACTTCACTGTGTTAATACTTAACGT 58.860 33.333 7.79 0.00 46.53 3.99
940 941 8.425491 CAGACTTCACTGTGTTAATACTTAACG 58.575 37.037 7.79 0.00 46.53 3.18
941 942 9.472361 TCAGACTTCACTGTGTTAATACTTAAC 57.528 33.333 7.79 3.40 39.80 2.01
943 944 9.692749 CTTCAGACTTCACTGTGTTAATACTTA 57.307 33.333 7.79 0.00 38.79 2.24
944 945 7.171678 GCTTCAGACTTCACTGTGTTAATACTT 59.828 37.037 7.79 0.00 38.79 2.24
945 946 6.647067 GCTTCAGACTTCACTGTGTTAATACT 59.353 38.462 7.79 0.00 38.79 2.12
946 947 6.400091 CGCTTCAGACTTCACTGTGTTAATAC 60.400 42.308 7.79 0.00 38.79 1.89
947 948 5.633601 CGCTTCAGACTTCACTGTGTTAATA 59.366 40.000 7.79 0.00 38.79 0.98
948 949 4.449068 CGCTTCAGACTTCACTGTGTTAAT 59.551 41.667 7.79 0.00 38.79 1.40
949 950 3.802139 CGCTTCAGACTTCACTGTGTTAA 59.198 43.478 7.79 0.00 38.79 2.01
950 951 3.381045 CGCTTCAGACTTCACTGTGTTA 58.619 45.455 7.79 0.00 38.79 2.41
951 952 2.205074 CGCTTCAGACTTCACTGTGTT 58.795 47.619 7.79 0.00 38.79 3.32
952 953 1.539065 CCGCTTCAGACTTCACTGTGT 60.539 52.381 7.79 0.00 38.79 3.72
953 954 1.143305 CCGCTTCAGACTTCACTGTG 58.857 55.000 0.17 0.17 38.79 3.66
954 955 0.753262 ACCGCTTCAGACTTCACTGT 59.247 50.000 0.00 0.00 38.79 3.55
955 956 1.269778 TGACCGCTTCAGACTTCACTG 60.270 52.381 0.00 0.00 39.02 3.66
956 957 1.040646 TGACCGCTTCAGACTTCACT 58.959 50.000 0.00 0.00 0.00 3.41
957 958 1.527311 GTTGACCGCTTCAGACTTCAC 59.473 52.381 0.00 0.00 34.94 3.18
958 959 1.412710 AGTTGACCGCTTCAGACTTCA 59.587 47.619 0.00 0.00 34.94 3.02
959 960 1.795286 CAGTTGACCGCTTCAGACTTC 59.205 52.381 0.00 0.00 34.94 3.01
960 961 1.412710 TCAGTTGACCGCTTCAGACTT 59.587 47.619 0.00 0.00 34.94 3.01
961 962 1.000283 CTCAGTTGACCGCTTCAGACT 60.000 52.381 0.00 0.00 34.94 3.24
962 963 1.423395 CTCAGTTGACCGCTTCAGAC 58.577 55.000 0.00 0.00 34.94 3.51
963 964 0.318441 CCTCAGTTGACCGCTTCAGA 59.682 55.000 0.00 0.00 34.94 3.27
964 965 0.034059 ACCTCAGTTGACCGCTTCAG 59.966 55.000 0.00 0.00 34.94 3.02
965 966 0.033504 GACCTCAGTTGACCGCTTCA 59.966 55.000 0.00 0.00 0.00 3.02
970 971 0.523546 CGATCGACCTCAGTTGACCG 60.524 60.000 10.26 0.00 37.07 4.79
972 973 2.095161 AGAACGATCGACCTCAGTTGAC 60.095 50.000 24.34 0.00 39.28 3.18
976 977 0.171455 GCAGAACGATCGACCTCAGT 59.829 55.000 24.34 0.00 0.00 3.41
982 983 2.476619 CCATTATGGCAGAACGATCGAC 59.523 50.000 24.34 14.96 0.00 4.20
996 997 2.111043 ACGGAGGCGGCCATTATG 59.889 61.111 23.09 8.42 0.00 1.90
997 998 2.111043 CACGGAGGCGGCCATTAT 59.889 61.111 23.09 0.00 0.00 1.28
998 999 4.169696 CCACGGAGGCGGCCATTA 62.170 66.667 23.09 0.00 0.00 1.90
1040 1041 0.450482 GTTGTTGTTCATCGTCGGCG 60.450 55.000 1.15 1.15 39.92 6.46
1044 1045 1.398451 CGCTGGTTGTTGTTCATCGTC 60.398 52.381 0.00 0.00 0.00 4.20
1045 1046 0.586319 CGCTGGTTGTTGTTCATCGT 59.414 50.000 0.00 0.00 0.00 3.73
1054 1055 3.595758 GTGGCTGCGCTGGTTGTT 61.596 61.111 16.47 0.00 0.00 2.83
1075 1076 0.825840 CAAACGGTGGGGTGGTGAAT 60.826 55.000 0.00 0.00 0.00 2.57
1126 1127 0.113776 TAGTTCACCTGGGTCGGAGT 59.886 55.000 0.00 0.00 0.00 3.85
1132 1133 7.672239 TGCTAATTTAATTTAGTTCACCTGGGT 59.328 33.333 15.17 0.00 32.77 4.51
1134 1135 7.696453 CGTGCTAATTTAATTTAGTTCACCTGG 59.304 37.037 15.17 0.00 32.77 4.45
1150 1151 1.806542 CTGGTGTCTGCGTGCTAATTT 59.193 47.619 0.00 0.00 0.00 1.82
1160 1161 1.202651 AGGTACAACACTGGTGTCTGC 60.203 52.381 2.04 0.00 44.13 4.26
1165 1166 3.541632 ACAAGAAGGTACAACACTGGTG 58.458 45.455 0.00 0.00 0.00 4.17
1166 1167 3.926058 ACAAGAAGGTACAACACTGGT 57.074 42.857 0.00 0.00 0.00 4.00
1257 1330 8.723311 AGTCCATTTTGCATGAAAATATGTTTG 58.277 29.630 0.00 0.00 41.50 2.93
1286 1359 1.653151 GTGTCCGAGGTTATGCTTCC 58.347 55.000 0.00 0.00 0.00 3.46
1306 1379 4.091509 GTCTTAGACATTTACACCTGCACG 59.908 45.833 7.59 0.00 32.09 5.34
1307 1380 4.994852 TGTCTTAGACATTTACACCTGCAC 59.005 41.667 11.42 0.00 37.67 4.57
1308 1381 5.222079 TGTCTTAGACATTTACACCTGCA 57.778 39.130 11.42 0.00 37.67 4.41
1309 1382 4.093556 GCTGTCTTAGACATTTACACCTGC 59.906 45.833 15.91 8.43 41.94 4.85
1310 1383 5.237815 TGCTGTCTTAGACATTTACACCTG 58.762 41.667 15.91 2.04 41.94 4.00
1311 1384 5.483685 TGCTGTCTTAGACATTTACACCT 57.516 39.130 15.91 0.00 41.94 4.00
1313 1386 6.727824 ACATGCTGTCTTAGACATTTACAC 57.272 37.500 15.91 2.74 41.94 2.90
1314 1387 7.308529 CCAAACATGCTGTCTTAGACATTTACA 60.309 37.037 15.91 11.77 41.94 2.41
1315 1388 7.023575 CCAAACATGCTGTCTTAGACATTTAC 58.976 38.462 15.91 6.69 41.94 2.01
1316 1389 6.150976 CCCAAACATGCTGTCTTAGACATTTA 59.849 38.462 15.91 5.75 41.94 1.40
1318 1391 4.460382 CCCAAACATGCTGTCTTAGACATT 59.540 41.667 15.91 3.98 41.94 2.71
1321 1394 2.749621 CCCCAAACATGCTGTCTTAGAC 59.250 50.000 5.27 5.27 0.00 2.59
1323 1396 2.749621 GTCCCCAAACATGCTGTCTTAG 59.250 50.000 0.00 0.00 0.00 2.18
1324 1397 2.107378 TGTCCCCAAACATGCTGTCTTA 59.893 45.455 0.00 0.00 0.00 2.10
1325 1398 1.133513 TGTCCCCAAACATGCTGTCTT 60.134 47.619 0.00 0.00 0.00 3.01
1327 1400 0.598065 GTGTCCCCAAACATGCTGTC 59.402 55.000 0.00 0.00 0.00 3.51
1329 1402 0.827089 TGGTGTCCCCAAACATGCTG 60.827 55.000 0.00 0.00 41.50 4.41
1330 1403 1.541169 TGGTGTCCCCAAACATGCT 59.459 52.632 0.00 0.00 41.50 3.79
1331 1404 4.189539 TGGTGTCCCCAAACATGC 57.810 55.556 0.00 0.00 41.50 4.06
1337 1410 8.521795 ATACATTAGTACTCATGGTGTCCCCAA 61.522 40.741 18.83 0.00 38.94 4.12
1340 1413 4.755266 ACATTAGTACTCATGGTGTCCC 57.245 45.455 18.83 0.00 0.00 4.46
1341 1414 7.050970 TGATACATTAGTACTCATGGTGTCC 57.949 40.000 18.83 6.25 31.96 4.02
1342 1415 8.580720 AGATGATACATTAGTACTCATGGTGTC 58.419 37.037 18.83 13.68 33.05 3.67
1346 1419 9.636879 CAAGAGATGATACATTAGTACTCATGG 57.363 37.037 18.83 2.74 33.05 3.66
1347 1420 9.138062 GCAAGAGATGATACATTAGTACTCATG 57.862 37.037 14.24 14.24 33.05 3.07
1348 1421 8.864087 TGCAAGAGATGATACATTAGTACTCAT 58.136 33.333 0.00 0.00 34.31 2.90
1362 1435 4.260170 GGAAAGACACTGCAAGAGATGAT 58.740 43.478 0.00 0.00 37.43 2.45
1363 1436 3.071457 TGGAAAGACACTGCAAGAGATGA 59.929 43.478 0.00 0.00 37.43 2.92
1441 1515 0.540923 GAGGCAGATCAGCAGAACCT 59.459 55.000 12.54 0.00 35.83 3.50
1449 1523 0.177604 AAGCTTCCGAGGCAGATCAG 59.822 55.000 5.18 0.00 0.00 2.90
1519 1593 4.001652 CACACAGCAAGTCATTGATCTCT 58.998 43.478 0.00 0.00 38.83 3.10
1531 1605 2.439409 TCATGAATCCCACACAGCAAG 58.561 47.619 0.00 0.00 0.00 4.01
1570 1644 2.434185 GCCGCCGTGTGAAGATCA 60.434 61.111 0.00 0.00 0.00 2.92
1588 1662 4.735369 TCCTGAGCAAATAAAACCCAAGA 58.265 39.130 0.00 0.00 0.00 3.02
1592 1666 5.208463 TGTTTCCTGAGCAAATAAAACCC 57.792 39.130 0.00 0.00 0.00 4.11
1859 1939 3.734463 TGGTCTTTTGTGTAAGCGATCA 58.266 40.909 0.00 0.00 0.00 2.92
1886 1966 2.028484 GTTGCTCCACGACACGGA 59.972 61.111 0.00 0.00 32.30 4.69
1887 1967 1.433053 TTTGTTGCTCCACGACACGG 61.433 55.000 0.00 0.00 42.62 4.94
1892 1972 3.129462 TGAAATTGTTTGTTGCTCCACGA 59.871 39.130 0.00 0.00 0.00 4.35
1918 1998 3.127203 CGCACCTCCTCGAGTAATATAGG 59.873 52.174 12.31 10.04 0.00 2.57
1920 2000 3.079578 CCGCACCTCCTCGAGTAATATA 58.920 50.000 12.31 0.00 0.00 0.86
1944 2024 0.034337 AAAGAGGCGTTTCCAGCGTA 59.966 50.000 0.00 0.00 37.29 4.42
2076 2156 0.174617 GCTCCTCACAGTACAGAGCC 59.825 60.000 0.00 0.00 43.27 4.70
2147 4506 6.029346 ACAGAAGGTGAAATTTTGCCTATG 57.971 37.500 12.85 15.09 0.00 2.23
2199 6619 5.246203 AGAGTTGTGTCTGGCATTAGAGTTA 59.754 40.000 0.00 0.00 0.00 2.24
2221 6641 5.772393 TTTCAAGAGTTAAGGGGCATAGA 57.228 39.130 0.00 0.00 0.00 1.98
2246 6666 5.806818 TGATACAACGGAGGGTATGAAAAA 58.193 37.500 0.00 0.00 33.46 1.94
2263 6687 8.267183 ACCATGAACTCAGATTGTAATGATACA 58.733 33.333 0.00 0.00 40.24 2.29
2267 6691 7.448161 ACAAACCATGAACTCAGATTGTAATGA 59.552 33.333 0.00 0.00 0.00 2.57
2453 6881 2.717580 AGCTGTCGTAAATGTCGTCA 57.282 45.000 0.00 0.00 0.00 4.35
2456 6884 2.279136 GCTGTAGCTGTCGTAAATGTCG 59.721 50.000 0.00 0.00 38.21 4.35
2492 6920 1.590591 TTGCCATGGTAAGGAGCCTA 58.409 50.000 11.68 0.00 0.00 3.93
2523 6951 8.759782 ACCACCCTAGCTCACATAAATATATAC 58.240 37.037 0.00 0.00 0.00 1.47
2531 6959 5.013287 TGTTAAACCACCCTAGCTCACATAA 59.987 40.000 0.00 0.00 0.00 1.90
2696 7131 6.625960 GCTTGTTTCCTTGACTATCCAAATCC 60.626 42.308 0.00 0.00 0.00 3.01
2785 7220 5.924254 TCCTATGCGAGTATTTATCGGTTTG 59.076 40.000 0.00 0.00 40.50 2.93
2872 7310 3.123620 CCTCAAGTGGCTCTGCGC 61.124 66.667 0.00 0.00 38.13 6.09
2891 7330 8.565896 TTCATCACTTTTATCTACTTGTGCAT 57.434 30.769 0.00 0.00 0.00 3.96
2982 7421 3.181493 GCCAACAGTTAAGATGAGCCATG 60.181 47.826 0.00 0.00 0.00 3.66
3217 9296 1.000274 GTTTCCTCACGCCATTTTGCT 60.000 47.619 0.00 0.00 0.00 3.91
3237 9316 1.497991 CACAGTAACAGGTGTGTCGG 58.502 55.000 0.00 0.00 39.42 4.79
3256 9335 1.522580 GAATCGCAGGTGCTCCTCC 60.523 63.158 3.81 0.00 43.07 4.30
3319 9398 3.222603 TCTGCTCGCTCCTATGATAACA 58.777 45.455 0.00 0.00 0.00 2.41
3323 9402 2.284754 TCTCTGCTCGCTCCTATGAT 57.715 50.000 0.00 0.00 0.00 2.45
3651 9932 9.489084 GTTCTAGAAAATATTTTGCCAAACCTT 57.511 29.630 17.98 0.00 0.00 3.50
3653 9934 8.708742 GTGTTCTAGAAAATATTTTGCCAAACC 58.291 33.333 17.98 2.19 0.00 3.27
3846 10128 3.542648 CATCAACTGATGCAGAGACCAT 58.457 45.455 6.76 0.00 44.44 3.55
3880 10182 9.717942 GATCATACCCATCTATTAATATGGCTC 57.282 37.037 10.64 0.12 41.19 4.70
3969 10271 1.911057 TGACATCACAGACCTCTCGT 58.089 50.000 0.00 0.00 0.00 4.18
4052 10354 1.133325 TGACTCCTCTATGAGCTCCCC 60.133 57.143 12.15 0.00 35.72 4.81
4157 10459 4.974645 TGTACAAGAAGTCCAACATCCT 57.025 40.909 0.00 0.00 0.00 3.24
4388 10693 7.607991 ACCAGTTGATCGAAAGACTTGATTATT 59.392 33.333 0.00 0.00 46.97 1.40
4441 10748 1.909302 AGTAGTGGCTGGTGTAATGCT 59.091 47.619 0.00 0.00 0.00 3.79
4446 10753 1.418264 TGCAAAGTAGTGGCTGGTGTA 59.582 47.619 0.00 0.00 0.00 2.90
4486 10793 1.871418 TGCCTCTAGCTGTCAGGAAT 58.129 50.000 10.78 0.00 44.23 3.01
4502 10809 2.671130 GAGAGCAGCTCCTATATGCC 57.329 55.000 19.40 0.00 40.89 4.40
4541 10848 1.987855 CCTCGCTTGGGAGGTACCA 60.988 63.158 21.15 0.00 46.97 3.25
4593 10900 2.414750 AGGCACTTCAAACGGTTGG 58.585 52.632 14.34 0.00 35.29 3.77
4649 10960 5.381757 TGACACCATAAAAGGTAAAGCACT 58.618 37.500 0.00 0.00 40.77 4.40
4683 11035 6.194235 ACCATTTGATAACATATGTGTGGGT 58.806 36.000 9.63 6.29 38.92 4.51
4686 11038 9.897744 GGATAACCATTTGATAACATATGTGTG 57.102 33.333 9.63 0.83 35.89 3.82
4752 11104 1.264749 ATCCAGCTGTAACGGAGGCA 61.265 55.000 13.81 0.00 30.84 4.75
4760 11112 4.635765 GCACTTACATGAATCCAGCTGTAA 59.364 41.667 13.81 0.01 34.08 2.41
4761 11113 4.080919 AGCACTTACATGAATCCAGCTGTA 60.081 41.667 13.81 0.00 0.00 2.74
4776 11129 9.681062 AATAGAGATCCTAGATCTAGCACTTAC 57.319 37.037 22.33 11.88 31.95 2.34
4826 11179 0.317799 GCATGGGCACATTTGACACA 59.682 50.000 0.00 0.00 40.72 3.72
4881 11234 5.010415 TGTTGCACACATATGTTTTCCATGA 59.990 36.000 5.37 0.00 36.72 3.07
4883 11236 5.465532 TGTTGCACACATATGTTTTCCAT 57.534 34.783 5.37 0.00 36.72 3.41
4884 11237 4.926140 TGTTGCACACATATGTTTTCCA 57.074 36.364 5.37 0.00 36.72 3.53
4937 11546 7.554118 CCAGAGGATTTTCTCTTACTGCAAATA 59.446 37.037 0.00 0.00 41.76 1.40
4946 11555 5.762179 TGCTTCCAGAGGATTTTCTCTTA 57.238 39.130 0.00 0.00 41.76 2.10
4987 11596 2.322161 GCACAATGTTGCACACATCTC 58.678 47.619 12.77 2.90 46.23 2.75
4989 11598 1.054574 CGCACAATGTTGCACACATC 58.945 50.000 12.77 3.14 46.23 3.06
5029 11638 0.246910 TGCAAGTGCGGACGGTATTA 59.753 50.000 0.00 0.00 45.83 0.98
5052 11661 5.289595 TGATGCTCTATACGATGTTCCAAC 58.710 41.667 0.00 0.00 0.00 3.77
5095 11704 4.024556 CCTCCATTGTTGATAATGAGACGC 60.025 45.833 2.50 0.00 39.79 5.19
5097 11706 4.883585 TGCCTCCATTGTTGATAATGAGAC 59.116 41.667 2.50 0.00 39.79 3.36
5122 11731 0.324614 CCCAAATTGGCAAAGGGGTC 59.675 55.000 21.52 0.00 35.79 4.46
5145 11754 3.411446 ACAAGCTGAATTCATGGTCGAA 58.589 40.909 8.96 0.00 0.00 3.71
5153 11762 3.149196 GGGTTCTGACAAGCTGAATTCA 58.851 45.455 8.12 8.12 36.91 2.57
5166 14138 2.111999 CTGGCTCAACCGGGTTCTGA 62.112 60.000 10.04 5.36 43.94 3.27
5168 14140 1.201429 ATCTGGCTCAACCGGGTTCT 61.201 55.000 10.04 0.00 46.01 3.01
5190 14162 4.597507 TCAAGGAACAGTTCTAGGGTCATT 59.402 41.667 13.13 0.00 0.00 2.57
5258 14230 4.462834 TGAACTGATGAATACCTCGTGACT 59.537 41.667 0.00 0.00 0.00 3.41
5260 14232 5.351458 CATGAACTGATGAATACCTCGTGA 58.649 41.667 0.00 0.00 0.00 4.35
5305 14277 3.009115 CCTCTTCCTTCCCCGGCA 61.009 66.667 0.00 0.00 0.00 5.69
5308 14280 1.404843 CTACTCCTCTTCCTTCCCCG 58.595 60.000 0.00 0.00 0.00 5.73
5349 14352 1.272147 GCCACCATGGAAGAAGGAACT 60.272 52.381 21.47 0.00 40.96 3.01
5381 14384 4.497291 AGTCTACGAGGAGAAGAGATGT 57.503 45.455 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.