Multiple sequence alignment - TraesCS5B01G013000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G013000 chr5B 100.000 5504 0 0 1 5504 13086764 13081261 0.000000e+00 10165.0
1 TraesCS5B01G013000 chr5B 88.660 97 11 0 1521 1617 681344303 681344207 9.690000e-23 119.0
2 TraesCS5B01G013000 chr5A 94.145 1708 61 22 3810 5504 10198385 10196704 0.000000e+00 2564.0
3 TraesCS5B01G013000 chr5A 88.294 1794 102 51 730 2476 10201299 10199567 0.000000e+00 2050.0
4 TraesCS5B01G013000 chr5A 87.996 933 80 18 2891 3818 10199306 10198401 0.000000e+00 1074.0
5 TraesCS5B01G013000 chr5A 86.891 267 8 6 471 714 10201547 10201285 1.950000e-69 274.0
6 TraesCS5B01G013000 chr5A 88.601 193 10 8 1 185 10201867 10201679 2.000000e-54 224.0
7 TraesCS5B01G013000 chr5A 86.286 175 11 10 2654 2818 10199521 10199350 1.580000e-40 178.0
8 TraesCS5B01G013000 chr5A 88.298 94 3 2 349 442 10201629 10201544 7.540000e-19 106.0
9 TraesCS5B01G013000 chr5D 89.538 1472 85 36 730 2175 13318319 13316891 0.000000e+00 1801.0
10 TraesCS5B01G013000 chr5D 85.308 633 63 19 4894 5504 13313621 13312997 1.300000e-175 627.0
11 TraesCS5B01G013000 chr5D 80.397 806 109 32 3227 4019 13315970 13315201 8.000000e-158 568.0
12 TraesCS5B01G013000 chr5D 84.615 468 46 14 4315 4770 13314177 13313724 5.060000e-120 442.0
13 TraesCS5B01G013000 chr5D 82.480 371 21 18 349 712 13318640 13318307 9.020000e-73 285.0
14 TraesCS5B01G013000 chr5D 94.545 165 9 0 2490 2654 101809920 101809756 7.080000e-64 255.0
15 TraesCS5B01G013000 chr5D 86.010 193 13 10 1 185 13318884 13318698 1.560000e-45 195.0
16 TraesCS5B01G013000 chr5D 87.629 97 12 0 1521 1617 539675507 539675411 4.510000e-21 113.0
17 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525268511 525268430 4.570000e-11 80.5
18 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525268888 525268807 4.570000e-11 80.5
19 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525270027 525269946 4.570000e-11 80.5
20 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525270404 525270323 4.570000e-11 80.5
21 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525270781 525270700 4.570000e-11 80.5
22 TraesCS5B01G013000 chr5D 84.146 82 13 0 3062 3143 525271158 525271077 4.570000e-11 80.5
23 TraesCS5B01G013000 chr5D 83.951 81 13 0 3062 3142 525267344 525267264 1.640000e-10 78.7
24 TraesCS5B01G013000 chr4A 95.758 165 7 0 2490 2654 244230190 244230026 3.270000e-67 267.0
25 TraesCS5B01G013000 chr4A 94.578 166 9 0 2489 2654 292272186 292272021 1.970000e-64 257.0
26 TraesCS5B01G013000 chr4A 94.545 165 9 0 2490 2654 324519446 324519610 7.080000e-64 255.0
27 TraesCS5B01G013000 chr4A 94.545 165 9 0 2490 2654 324986545 324986709 7.080000e-64 255.0
28 TraesCS5B01G013000 chr4A 89.247 93 10 0 1525 1617 595296232 595296140 3.480000e-22 117.0
29 TraesCS5B01G013000 chr4A 87.629 97 12 0 1521 1617 628849282 628849378 4.510000e-21 113.0
30 TraesCS5B01G013000 chr3D 95.758 165 7 0 2490 2654 273857489 273857325 3.270000e-67 267.0
31 TraesCS5B01G013000 chr1D 95.181 166 7 1 2490 2654 216825244 216825079 1.520000e-65 261.0
32 TraesCS5B01G013000 chr1D 94.545 165 9 0 2490 2654 207810882 207810718 7.080000e-64 255.0
33 TraesCS5B01G013000 chr1D 88.889 72 4 4 3046 3114 487741210 487741280 9.820000e-13 86.1
34 TraesCS5B01G013000 chr2D 94.545 165 9 0 2490 2654 476515309 476515145 7.080000e-64 255.0
35 TraesCS5B01G013000 chr4B 79.793 193 31 4 1986 2174 15183778 15183590 3.460000e-27 134.0
36 TraesCS5B01G013000 chr4B 79.275 193 32 4 1986 2174 15149748 15149560 1.610000e-25 128.0
37 TraesCS5B01G013000 chr4B 89.247 93 10 0 1525 1617 15431123 15431031 3.480000e-22 117.0
38 TraesCS5B01G013000 chr4B 100.000 28 0 0 3124 3151 553950814 553950841 1.000000e-02 52.8
39 TraesCS5B01G013000 chr4D 87.037 108 11 3 1525 1632 8150922 8150818 9.690000e-23 119.0
40 TraesCS5B01G013000 chr4D 88.542 96 11 0 1522 1617 7992950 7993045 3.480000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G013000 chr5B 13081261 13086764 5503 True 10165.000000 10165 100.000000 1 5504 1 chr5B.!!$R1 5503
1 TraesCS5B01G013000 chr5A 10196704 10201867 5163 True 924.285714 2564 88.644429 1 5504 7 chr5A.!!$R1 5503
2 TraesCS5B01G013000 chr5D 13312997 13318884 5887 True 653.000000 1801 84.724667 1 5504 6 chr5D.!!$R3 5503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 292 0.027194 CGAATCACTCATGCCAAGCG 59.973 55.0 0.00 0.0 0.0 4.68 F
1659 1730 0.096976 CGATTTCATTCCACGCGCTT 59.903 50.0 5.73 0.0 0.0 4.68 F
1936 2007 0.615331 AGCAAGAAGATCAAGGCGGA 59.385 50.0 0.00 0.0 0.0 5.54 F
3058 3450 0.180406 GTGTACCCCTGATCGGCAAT 59.820 55.0 0.00 0.0 0.0 3.56 F
3659 4056 0.321653 AAAGCTGTGTGACCGGATCC 60.322 55.0 9.46 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1836 0.108186 GTCCATCTGCACATGTCGGA 60.108 55.0 0.00 2.21 0.0 4.55 R
3009 3401 0.251430 TAAAACAGAAAGGGCCGGGG 60.251 55.0 2.18 0.00 0.0 5.73 R
3659 4056 0.036164 TTGGGGTTGTCACATCTCCG 59.964 55.0 0.07 0.00 0.0 4.63 R
4144 4798 0.179189 GCGTGAATGTGTAGCCTTGC 60.179 55.0 0.00 0.00 0.0 4.01 R
4516 5693 0.326264 AAAGGGCTGATCGACTTGCT 59.674 50.0 0.00 0.00 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 107 1.464608 GCACGCAGCTAGTTTGATTGA 59.535 47.619 0.00 0.00 41.15 2.57
106 108 2.095768 GCACGCAGCTAGTTTGATTGAA 60.096 45.455 0.00 0.00 41.15 2.69
107 109 3.426695 GCACGCAGCTAGTTTGATTGAAT 60.427 43.478 0.00 0.00 41.15 2.57
125 127 4.820897 TGAATAATATACCAGGCGCTCAG 58.179 43.478 7.64 0.00 0.00 3.35
138 140 2.352814 GGCGCTCAGAAGTTGACTCTTA 60.353 50.000 7.64 0.00 0.00 2.10
139 141 3.318017 GCGCTCAGAAGTTGACTCTTAA 58.682 45.455 0.00 0.00 0.00 1.85
141 143 4.143221 GCGCTCAGAAGTTGACTCTTAAAG 60.143 45.833 0.00 0.00 0.00 1.85
144 153 4.642429 TCAGAAGTTGACTCTTAAAGCCC 58.358 43.478 0.00 0.00 0.00 5.19
165 174 1.731709 GCATCGCTCAACACATGTGTA 59.268 47.619 30.75 16.02 44.13 2.90
169 178 2.135139 CGCTCAACACATGTGTACAGT 58.865 47.619 30.75 13.43 44.13 3.55
172 181 4.307432 GCTCAACACATGTGTACAGTAGT 58.693 43.478 30.75 11.51 44.13 2.73
173 182 4.750098 GCTCAACACATGTGTACAGTAGTT 59.250 41.667 30.75 10.74 44.13 2.24
178 187 7.436970 TCAACACATGTGTACAGTAGTTTGTAG 59.563 37.037 30.75 6.88 44.13 2.74
180 189 7.944061 ACACATGTGTACAGTAGTTTGTAGTA 58.056 34.615 29.66 0.00 42.90 1.82
185 194 9.991906 ATGTGTACAGTAGTTTGTAGTATTTGT 57.008 29.630 0.00 0.00 34.41 2.83
186 195 9.251792 TGTGTACAGTAGTTTGTAGTATTTGTG 57.748 33.333 0.00 0.00 34.41 3.33
187 196 9.252962 GTGTACAGTAGTTTGTAGTATTTGTGT 57.747 33.333 0.00 0.00 34.41 3.72
191 200 8.092687 ACAGTAGTTTGTAGTATTTGTGTAGGG 58.907 37.037 0.00 0.00 0.00 3.53
192 201 7.548075 CAGTAGTTTGTAGTATTTGTGTAGGGG 59.452 40.741 0.00 0.00 0.00 4.79
193 202 5.250982 AGTTTGTAGTATTTGTGTAGGGGC 58.749 41.667 0.00 0.00 0.00 5.80
194 203 3.918294 TGTAGTATTTGTGTAGGGGCC 57.082 47.619 0.00 0.00 0.00 5.80
197 206 0.253894 GTATTTGTGTAGGGGCCGGT 59.746 55.000 1.90 0.00 0.00 5.28
198 207 0.993470 TATTTGTGTAGGGGCCGGTT 59.007 50.000 1.90 0.00 0.00 4.44
200 209 0.106116 TTTGTGTAGGGGCCGGTTTT 60.106 50.000 1.90 0.00 0.00 2.43
222 231 6.827586 TTTTTAGTTGAGTTGTGTGGACTT 57.172 33.333 0.00 0.00 0.00 3.01
223 232 5.811399 TTTAGTTGAGTTGTGTGGACTTG 57.189 39.130 0.00 0.00 0.00 3.16
224 233 3.627395 AGTTGAGTTGTGTGGACTTGA 57.373 42.857 0.00 0.00 0.00 3.02
226 235 4.526970 AGTTGAGTTGTGTGGACTTGATT 58.473 39.130 0.00 0.00 0.00 2.57
227 236 5.680619 AGTTGAGTTGTGTGGACTTGATTA 58.319 37.500 0.00 0.00 0.00 1.75
228 237 6.299141 AGTTGAGTTGTGTGGACTTGATTAT 58.701 36.000 0.00 0.00 0.00 1.28
229 238 6.205464 AGTTGAGTTGTGTGGACTTGATTATG 59.795 38.462 0.00 0.00 0.00 1.90
230 239 5.863965 TGAGTTGTGTGGACTTGATTATGA 58.136 37.500 0.00 0.00 0.00 2.15
231 240 6.475504 TGAGTTGTGTGGACTTGATTATGAT 58.524 36.000 0.00 0.00 0.00 2.45
232 241 6.372381 TGAGTTGTGTGGACTTGATTATGATG 59.628 38.462 0.00 0.00 0.00 3.07
234 243 6.716628 AGTTGTGTGGACTTGATTATGATGTT 59.283 34.615 0.00 0.00 0.00 2.71
235 244 7.231317 AGTTGTGTGGACTTGATTATGATGTTT 59.769 33.333 0.00 0.00 0.00 2.83
277 286 4.801147 TTAGATTGCGAATCACTCATGC 57.199 40.909 10.26 0.00 40.42 4.06
278 287 1.945394 AGATTGCGAATCACTCATGCC 59.055 47.619 10.26 0.00 40.42 4.40
279 288 1.672363 GATTGCGAATCACTCATGCCA 59.328 47.619 0.00 0.00 37.83 4.92
280 289 1.532523 TTGCGAATCACTCATGCCAA 58.467 45.000 0.00 0.00 0.00 4.52
281 290 1.089112 TGCGAATCACTCATGCCAAG 58.911 50.000 0.00 0.00 0.00 3.61
282 291 0.248377 GCGAATCACTCATGCCAAGC 60.248 55.000 0.00 0.00 0.00 4.01
283 292 0.027194 CGAATCACTCATGCCAAGCG 59.973 55.000 0.00 0.00 0.00 4.68
284 293 1.089920 GAATCACTCATGCCAAGCGT 58.910 50.000 0.00 0.00 0.00 5.07
285 294 1.470098 GAATCACTCATGCCAAGCGTT 59.530 47.619 0.00 0.00 0.00 4.84
286 295 0.806868 ATCACTCATGCCAAGCGTTG 59.193 50.000 0.00 0.00 0.00 4.10
287 296 0.534877 TCACTCATGCCAAGCGTTGT 60.535 50.000 0.00 0.00 0.00 3.32
288 297 0.311790 CACTCATGCCAAGCGTTGTT 59.688 50.000 0.00 0.00 0.00 2.83
289 298 0.311790 ACTCATGCCAAGCGTTGTTG 59.688 50.000 0.00 0.00 0.00 3.33
290 299 0.592637 CTCATGCCAAGCGTTGTTGA 59.407 50.000 0.00 0.00 0.00 3.18
291 300 1.001487 CTCATGCCAAGCGTTGTTGAA 60.001 47.619 0.00 0.00 0.00 2.69
292 301 1.612950 TCATGCCAAGCGTTGTTGAAT 59.387 42.857 0.00 0.00 0.00 2.57
293 302 2.816672 TCATGCCAAGCGTTGTTGAATA 59.183 40.909 0.00 0.00 0.00 1.75
294 303 3.443329 TCATGCCAAGCGTTGTTGAATAT 59.557 39.130 0.00 0.00 0.00 1.28
295 304 4.637977 TCATGCCAAGCGTTGTTGAATATA 59.362 37.500 0.00 0.00 0.00 0.86
296 305 4.349663 TGCCAAGCGTTGTTGAATATAC 57.650 40.909 0.00 0.00 0.00 1.47
297 306 4.006989 TGCCAAGCGTTGTTGAATATACT 58.993 39.130 0.00 0.00 0.00 2.12
298 307 5.179533 TGCCAAGCGTTGTTGAATATACTA 58.820 37.500 0.00 0.00 0.00 1.82
299 308 5.820423 TGCCAAGCGTTGTTGAATATACTAT 59.180 36.000 0.00 0.00 0.00 2.12
300 309 6.317642 TGCCAAGCGTTGTTGAATATACTATT 59.682 34.615 0.00 0.00 0.00 1.73
301 310 7.148154 TGCCAAGCGTTGTTGAATATACTATTT 60.148 33.333 0.00 0.00 0.00 1.40
302 311 7.165812 GCCAAGCGTTGTTGAATATACTATTTG 59.834 37.037 0.00 0.00 0.00 2.32
303 312 8.394877 CCAAGCGTTGTTGAATATACTATTTGA 58.605 33.333 0.00 0.00 0.00 2.69
304 313 9.935682 CAAGCGTTGTTGAATATACTATTTGAT 57.064 29.630 0.00 0.00 0.00 2.57
320 329 8.503458 ACTATTTGATATGCATCTTATCCAGC 57.497 34.615 0.19 0.00 31.93 4.85
321 330 8.327271 ACTATTTGATATGCATCTTATCCAGCT 58.673 33.333 0.19 0.00 31.93 4.24
322 331 9.828039 CTATTTGATATGCATCTTATCCAGCTA 57.172 33.333 0.19 0.00 31.93 3.32
324 333 8.922931 TTTGATATGCATCTTATCCAGCTAAA 57.077 30.769 0.19 0.00 31.93 1.85
325 334 9.524496 TTTGATATGCATCTTATCCAGCTAAAT 57.476 29.630 0.19 0.00 31.93 1.40
326 335 8.502105 TGATATGCATCTTATCCAGCTAAATG 57.498 34.615 0.19 0.00 31.93 2.32
327 336 8.105197 TGATATGCATCTTATCCAGCTAAATGT 58.895 33.333 0.19 0.00 31.93 2.71
328 337 9.605275 GATATGCATCTTATCCAGCTAAATGTA 57.395 33.333 0.19 0.00 0.00 2.29
329 338 7.678947 ATGCATCTTATCCAGCTAAATGTAC 57.321 36.000 0.00 0.00 0.00 2.90
330 339 6.591001 TGCATCTTATCCAGCTAAATGTACA 58.409 36.000 0.00 0.00 0.00 2.90
331 340 7.053498 TGCATCTTATCCAGCTAAATGTACAA 58.947 34.615 0.00 0.00 0.00 2.41
332 341 7.012327 TGCATCTTATCCAGCTAAATGTACAAC 59.988 37.037 0.00 0.00 0.00 3.32
333 342 7.567571 CATCTTATCCAGCTAAATGTACAACG 58.432 38.462 0.00 0.00 0.00 4.10
334 343 6.869695 TCTTATCCAGCTAAATGTACAACGA 58.130 36.000 0.00 0.00 0.00 3.85
335 344 7.324935 TCTTATCCAGCTAAATGTACAACGAA 58.675 34.615 0.00 0.00 0.00 3.85
336 345 7.820386 TCTTATCCAGCTAAATGTACAACGAAA 59.180 33.333 0.00 0.00 0.00 3.46
337 346 6.811253 ATCCAGCTAAATGTACAACGAAAA 57.189 33.333 0.00 0.00 0.00 2.29
338 347 6.811253 TCCAGCTAAATGTACAACGAAAAT 57.189 33.333 0.00 0.00 0.00 1.82
339 348 6.607689 TCCAGCTAAATGTACAACGAAAATG 58.392 36.000 0.00 0.00 0.00 2.32
340 349 6.205853 TCCAGCTAAATGTACAACGAAAATGT 59.794 34.615 0.00 0.00 34.81 2.71
341 350 6.305399 CCAGCTAAATGTACAACGAAAATGTG 59.695 38.462 0.00 0.00 32.27 3.21
342 351 7.075121 CAGCTAAATGTACAACGAAAATGTGA 58.925 34.615 0.00 0.00 32.27 3.58
343 352 7.750458 CAGCTAAATGTACAACGAAAATGTGAT 59.250 33.333 0.00 0.00 32.27 3.06
344 353 7.750458 AGCTAAATGTACAACGAAAATGTGATG 59.250 33.333 0.00 0.00 32.27 3.07
345 354 7.748683 GCTAAATGTACAACGAAAATGTGATGA 59.251 33.333 0.00 0.00 32.27 2.92
346 355 9.605955 CTAAATGTACAACGAAAATGTGATGAA 57.394 29.630 0.00 0.00 32.27 2.57
347 356 8.864069 AAATGTACAACGAAAATGTGATGAAA 57.136 26.923 0.00 0.00 32.27 2.69
375 384 8.356657 TGGACATTTACTTTTCATGTTGGTAAG 58.643 33.333 0.00 0.00 31.10 2.34
376 385 8.357402 GGACATTTACTTTTCATGTTGGTAAGT 58.643 33.333 0.00 0.00 31.10 2.24
378 387 8.141268 ACATTTACTTTTCATGTTGGTAAGTGG 58.859 33.333 18.70 10.28 35.73 4.00
379 388 7.648039 TTTACTTTTCATGTTGGTAAGTGGT 57.352 32.000 0.00 0.00 31.94 4.16
380 389 8.749026 TTTACTTTTCATGTTGGTAAGTGGTA 57.251 30.769 0.00 0.00 31.94 3.25
381 390 6.628919 ACTTTTCATGTTGGTAAGTGGTAC 57.371 37.500 0.00 0.00 0.00 3.34
382 391 6.123651 ACTTTTCATGTTGGTAAGTGGTACA 58.876 36.000 0.00 0.00 34.01 2.90
413 422 5.906113 AAACGATGAGATCTAGTGACACT 57.094 39.130 13.68 13.68 0.00 3.55
462 471 5.387113 TGGTTGGCATTATCCTCTTATGT 57.613 39.130 0.00 0.00 0.00 2.29
463 472 6.508030 TGGTTGGCATTATCCTCTTATGTA 57.492 37.500 0.00 0.00 0.00 2.29
464 473 6.296026 TGGTTGGCATTATCCTCTTATGTAC 58.704 40.000 0.00 0.00 0.00 2.90
465 474 6.101150 TGGTTGGCATTATCCTCTTATGTACT 59.899 38.462 0.00 0.00 0.00 2.73
466 475 6.428159 GGTTGGCATTATCCTCTTATGTACTG 59.572 42.308 0.00 0.00 0.00 2.74
467 476 6.114187 TGGCATTATCCTCTTATGTACTGG 57.886 41.667 0.00 0.00 0.00 4.00
468 477 5.843969 TGGCATTATCCTCTTATGTACTGGA 59.156 40.000 0.00 0.00 0.00 3.86
469 478 6.014242 TGGCATTATCCTCTTATGTACTGGAG 60.014 42.308 0.00 0.00 0.00 3.86
470 479 6.014156 GGCATTATCCTCTTATGTACTGGAGT 60.014 42.308 0.00 0.00 0.00 3.85
471 480 7.178628 GGCATTATCCTCTTATGTACTGGAGTA 59.821 40.741 0.00 0.00 0.00 2.59
472 481 8.754080 GCATTATCCTCTTATGTACTGGAGTAT 58.246 37.037 0.00 0.00 32.54 2.12
489 498 6.219473 TGGAGTATCTACTACTAGTACGTGC 58.781 44.000 0.00 0.00 40.88 5.34
490 499 5.637387 GGAGTATCTACTACTAGTACGTGCC 59.363 48.000 0.00 0.00 40.88 5.01
505 514 2.743664 ACGTGCCGGTAGATTTTTAACC 59.256 45.455 1.90 0.00 0.00 2.85
511 520 2.777494 GGTAGATTTTTAACCGCGCAC 58.223 47.619 8.75 0.00 0.00 5.34
512 521 2.424341 GTAGATTTTTAACCGCGCACG 58.576 47.619 8.75 0.00 39.67 5.34
513 522 0.869730 AGATTTTTAACCGCGCACGT 59.130 45.000 8.75 0.00 37.70 4.49
514 523 2.067766 AGATTTTTAACCGCGCACGTA 58.932 42.857 8.75 0.00 37.70 3.57
515 524 2.159801 AGATTTTTAACCGCGCACGTAC 60.160 45.455 8.75 0.00 37.70 3.67
516 525 0.933097 TTTTTAACCGCGCACGTACA 59.067 45.000 8.75 0.00 37.70 2.90
554 563 3.055530 CAGTGGAACAGAAGCTATCCTGT 60.056 47.826 9.67 9.67 44.69 4.00
555 564 4.160439 CAGTGGAACAGAAGCTATCCTGTA 59.840 45.833 14.25 0.49 42.25 2.74
568 595 7.220741 AGCTATCCTGTACACACACATATAG 57.779 40.000 0.00 0.00 32.58 1.31
593 620 2.910688 AGTATTATCTGTGGGGTGCG 57.089 50.000 0.00 0.00 0.00 5.34
638 671 7.771826 AGTATAATACTGGTAGCTAGCTAGCTC 59.228 40.741 43.50 32.95 46.24 4.09
718 751 4.813697 GCTTTCTCTCTCTCTCTCTCTCTC 59.186 50.000 0.00 0.00 0.00 3.20
719 752 5.396213 GCTTTCTCTCTCTCTCTCTCTCTCT 60.396 48.000 0.00 0.00 0.00 3.10
720 753 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
721 754 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
722 755 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
723 756 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
724 757 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
725 758 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
726 759 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
727 760 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
728 761 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
729 762 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
730 763 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
731 764 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
732 765 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
733 766 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
734 767 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
735 768 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
736 769 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
737 770 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
738 771 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
739 772 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
740 773 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
741 774 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
742 775 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
743 776 6.303054 TCTCTCTCTCTCTCTCTCTCTCTAG 58.697 48.000 0.00 0.00 0.00 2.43
744 777 4.830046 TCTCTCTCTCTCTCTCTCTCTAGC 59.170 50.000 0.00 0.00 0.00 3.42
745 778 4.809193 TCTCTCTCTCTCTCTCTCTAGCT 58.191 47.826 0.00 0.00 0.00 3.32
746 779 5.953571 TCTCTCTCTCTCTCTCTCTAGCTA 58.046 45.833 0.00 0.00 0.00 3.32
747 780 6.007076 TCTCTCTCTCTCTCTCTCTAGCTAG 58.993 48.000 15.01 15.01 0.00 3.42
748 781 4.524714 TCTCTCTCTCTCTCTCTAGCTAGC 59.475 50.000 16.35 6.62 0.00 3.42
749 782 4.483950 TCTCTCTCTCTCTCTAGCTAGCT 58.516 47.826 23.12 23.12 0.00 3.32
783 816 2.438021 TCTCTCCCTCTCACTCTAGAGC 59.562 54.545 19.97 0.00 41.48 4.09
784 817 2.172505 CTCTCCCTCTCACTCTAGAGCA 59.827 54.545 19.97 5.76 41.48 4.26
785 818 2.172505 TCTCCCTCTCACTCTAGAGCAG 59.827 54.545 19.97 15.21 41.48 4.24
786 819 1.214175 TCCCTCTCACTCTAGAGCAGG 59.786 57.143 19.97 17.53 41.48 4.85
787 820 1.691196 CCTCTCACTCTAGAGCAGGG 58.309 60.000 19.97 14.88 41.48 4.45
823 866 3.634397 TCTGAAGCCAGGTATTTGAGG 57.366 47.619 0.00 0.00 40.76 3.86
824 867 3.181329 TCTGAAGCCAGGTATTTGAGGA 58.819 45.455 0.00 0.00 40.76 3.71
825 868 3.198635 TCTGAAGCCAGGTATTTGAGGAG 59.801 47.826 0.00 0.00 40.76 3.69
826 869 2.293170 GAAGCCAGGTATTTGAGGAGC 58.707 52.381 0.00 0.00 0.00 4.70
860 907 7.387673 TCAATCGTAGGGATATATTTGTGCTTG 59.612 37.037 0.00 0.00 34.08 4.01
861 908 6.169557 TCGTAGGGATATATTTGTGCTTGT 57.830 37.500 0.00 0.00 0.00 3.16
862 909 6.588204 TCGTAGGGATATATTTGTGCTTGTT 58.412 36.000 0.00 0.00 0.00 2.83
876 923 5.550290 TGTGCTTGTTGAGTTCATCATCTA 58.450 37.500 0.00 0.00 37.89 1.98
924 971 3.306225 GCATGGGATTGATGTGTTGTTGT 60.306 43.478 0.00 0.00 0.00 3.32
973 1023 0.322456 TTTGTTCCTGCAGGGATCGG 60.322 55.000 32.23 7.03 44.66 4.18
990 1041 1.654954 CGGTCGATCGAGGTTGAGGT 61.655 60.000 20.09 0.00 0.00 3.85
991 1042 0.531200 GGTCGATCGAGGTTGAGGTT 59.469 55.000 20.09 0.00 0.00 3.50
993 1044 1.201647 GTCGATCGAGGTTGAGGTTGA 59.798 52.381 20.09 0.00 0.00 3.18
995 1046 1.469940 CGATCGAGGTTGAGGTTGAGG 60.470 57.143 10.26 0.00 0.00 3.86
998 1052 0.390472 CGAGGTTGAGGTTGAGGAGC 60.390 60.000 0.00 0.00 0.00 4.70
1056 1110 2.047844 CAGCAGCAGTACCACGCT 60.048 61.111 0.00 0.00 39.66 5.07
1097 1151 0.810031 CCTGTATACGGTGGTGCTGC 60.810 60.000 10.79 0.00 0.00 5.25
1098 1152 0.175760 CTGTATACGGTGGTGCTGCT 59.824 55.000 3.31 0.00 0.00 4.24
1099 1153 0.108377 TGTATACGGTGGTGCTGCTG 60.108 55.000 0.00 0.00 0.00 4.41
1337 1391 4.039092 CAGGACCAGGGCCACCAG 62.039 72.222 16.27 0.00 40.13 4.00
1626 1697 2.431454 CTCAAGAAGGTTCCTTGCTCC 58.569 52.381 8.95 0.00 40.45 4.70
1629 1700 2.037385 AGAAGGTTCCTTGCTCCTCT 57.963 50.000 8.95 0.00 0.00 3.69
1632 1703 0.610687 AGGTTCCTTGCTCCTCTTCG 59.389 55.000 0.00 0.00 0.00 3.79
1634 1705 1.673329 GGTTCCTTGCTCCTCTTCGTC 60.673 57.143 0.00 0.00 0.00 4.20
1635 1706 0.608640 TTCCTTGCTCCTCTTCGTCC 59.391 55.000 0.00 0.00 0.00 4.79
1637 1708 0.610687 CCTTGCTCCTCTTCGTCCTT 59.389 55.000 0.00 0.00 0.00 3.36
1642 1713 1.740297 CTCCTCTTCGTCCTTCTCGA 58.260 55.000 0.00 0.00 35.50 4.04
1653 1724 3.307242 CGTCCTTCTCGATTTCATTCCAC 59.693 47.826 0.00 0.00 0.00 4.02
1656 1727 1.277326 TCTCGATTTCATTCCACGCG 58.723 50.000 3.53 3.53 0.00 6.01
1657 1728 0.315382 CTCGATTTCATTCCACGCGC 60.315 55.000 5.73 0.00 0.00 6.86
1658 1729 0.739462 TCGATTTCATTCCACGCGCT 60.739 50.000 5.73 0.00 0.00 5.92
1659 1730 0.096976 CGATTTCATTCCACGCGCTT 59.903 50.000 5.73 0.00 0.00 4.68
1660 1731 1.326245 CGATTTCATTCCACGCGCTTA 59.674 47.619 5.73 0.00 0.00 3.09
1661 1732 2.222931 CGATTTCATTCCACGCGCTTAA 60.223 45.455 5.73 0.00 0.00 1.85
1662 1733 3.726486 CGATTTCATTCCACGCGCTTAAA 60.726 43.478 5.73 0.00 0.00 1.52
1668 1739 2.380084 TCCACGCGCTTAAATCTTCT 57.620 45.000 5.73 0.00 0.00 2.85
1670 1741 2.671396 TCCACGCGCTTAAATCTTCTTC 59.329 45.455 5.73 0.00 0.00 2.87
1671 1742 2.673368 CCACGCGCTTAAATCTTCTTCT 59.327 45.455 5.73 0.00 0.00 2.85
1675 1746 5.728507 CACGCGCTTAAATCTTCTTCTTAAC 59.271 40.000 5.73 0.00 0.00 2.01
1678 1749 6.456988 CGCGCTTAAATCTTCTTCTTAACCAT 60.457 38.462 5.56 0.00 0.00 3.55
1685 1756 4.256920 TCTTCTTCTTAACCATCTGCAGC 58.743 43.478 9.47 0.00 0.00 5.25
1686 1757 3.988976 TCTTCTTAACCATCTGCAGCT 57.011 42.857 9.47 0.00 0.00 4.24
1690 1761 5.643777 TCTTCTTAACCATCTGCAGCTTAAC 59.356 40.000 9.47 0.00 0.00 2.01
1693 1764 6.889198 TCTTAACCATCTGCAGCTTAACTAT 58.111 36.000 9.47 0.00 0.00 2.12
1694 1765 8.018537 TCTTAACCATCTGCAGCTTAACTATA 57.981 34.615 9.47 0.00 0.00 1.31
1695 1766 7.926555 TCTTAACCATCTGCAGCTTAACTATAC 59.073 37.037 9.47 0.00 0.00 1.47
1696 1767 5.878406 ACCATCTGCAGCTTAACTATACT 57.122 39.130 9.47 0.00 0.00 2.12
1698 1769 6.051717 ACCATCTGCAGCTTAACTATACTTG 58.948 40.000 9.47 0.00 0.00 3.16
1699 1770 5.468072 CCATCTGCAGCTTAACTATACTTGG 59.532 44.000 9.47 0.00 0.00 3.61
1700 1771 5.023533 TCTGCAGCTTAACTATACTTGGG 57.976 43.478 9.47 0.00 0.00 4.12
1701 1772 3.541632 TGCAGCTTAACTATACTTGGGC 58.458 45.455 0.00 0.00 0.00 5.36
1702 1773 3.054728 TGCAGCTTAACTATACTTGGGCA 60.055 43.478 0.00 0.00 0.00 5.36
1703 1774 3.561725 GCAGCTTAACTATACTTGGGCAG 59.438 47.826 0.00 0.00 0.00 4.85
1704 1775 4.683400 GCAGCTTAACTATACTTGGGCAGA 60.683 45.833 0.00 0.00 0.00 4.26
1705 1776 5.615289 CAGCTTAACTATACTTGGGCAGAT 58.385 41.667 0.00 0.00 0.00 2.90
1707 1778 6.543831 CAGCTTAACTATACTTGGGCAGATTT 59.456 38.462 0.00 0.00 0.00 2.17
1708 1779 7.715249 CAGCTTAACTATACTTGGGCAGATTTA 59.285 37.037 0.00 0.00 0.00 1.40
1726 1797 9.390795 GCAGATTTATTAAGATTGTATGTGCAG 57.609 33.333 0.00 0.00 32.88 4.41
1734 1805 9.890629 ATTAAGATTGTATGTGCAGACTAAGAA 57.109 29.630 0.00 0.00 0.00 2.52
1737 1808 8.798859 AGATTGTATGTGCAGACTAAGAATTT 57.201 30.769 0.00 0.00 0.00 1.82
1739 1810 9.282247 GATTGTATGTGCAGACTAAGAATTTTG 57.718 33.333 0.00 0.00 0.00 2.44
1740 1811 7.977789 TGTATGTGCAGACTAAGAATTTTGA 57.022 32.000 0.00 0.00 0.00 2.69
1742 1813 8.668353 TGTATGTGCAGACTAAGAATTTTGATC 58.332 33.333 0.00 0.00 0.00 2.92
1743 1814 7.934855 ATGTGCAGACTAAGAATTTTGATCT 57.065 32.000 0.00 0.00 0.00 2.75
1745 1816 8.256611 TGTGCAGACTAAGAATTTTGATCTAC 57.743 34.615 0.00 0.00 0.00 2.59
1746 1817 8.097038 TGTGCAGACTAAGAATTTTGATCTACT 58.903 33.333 0.00 0.00 0.00 2.57
1747 1818 8.599774 GTGCAGACTAAGAATTTTGATCTACTC 58.400 37.037 0.00 0.00 0.00 2.59
1748 1819 7.766278 TGCAGACTAAGAATTTTGATCTACTCC 59.234 37.037 0.00 0.00 0.00 3.85
1749 1820 7.984617 GCAGACTAAGAATTTTGATCTACTCCT 59.015 37.037 0.00 0.00 0.00 3.69
1756 1827 9.745018 AAGAATTTTGATCTACTCCTTGATGAA 57.255 29.630 0.00 0.00 0.00 2.57
1757 1828 9.171877 AGAATTTTGATCTACTCCTTGATGAAC 57.828 33.333 0.00 0.00 0.00 3.18
1758 1829 9.171877 GAATTTTGATCTACTCCTTGATGAACT 57.828 33.333 0.00 0.00 0.00 3.01
1759 1830 7.912056 TTTTGATCTACTCCTTGATGAACTG 57.088 36.000 0.00 0.00 0.00 3.16
1760 1831 5.604758 TGATCTACTCCTTGATGAACTGG 57.395 43.478 0.00 0.00 0.00 4.00
1762 1833 5.127845 TGATCTACTCCTTGATGAACTGGTC 59.872 44.000 0.00 0.00 0.00 4.02
1764 1835 3.971245 ACTCCTTGATGAACTGGTCTC 57.029 47.619 0.00 0.00 0.00 3.36
1765 1836 3.515562 ACTCCTTGATGAACTGGTCTCT 58.484 45.455 0.00 0.00 0.00 3.10
1766 1837 3.513515 ACTCCTTGATGAACTGGTCTCTC 59.486 47.826 0.00 0.00 0.00 3.20
1767 1838 2.834549 TCCTTGATGAACTGGTCTCTCC 59.165 50.000 0.00 0.00 0.00 3.71
1768 1839 2.417924 CCTTGATGAACTGGTCTCTCCG 60.418 54.545 0.00 0.00 39.52 4.63
1769 1840 2.215942 TGATGAACTGGTCTCTCCGA 57.784 50.000 0.00 0.00 39.52 4.55
1770 1841 1.819288 TGATGAACTGGTCTCTCCGAC 59.181 52.381 0.00 0.00 42.07 4.79
1835 1906 2.583520 GTGAGGGAGCTGCAGGAG 59.416 66.667 17.12 0.00 0.00 3.69
1901 1972 3.646715 ACCACCACCACCATCCGG 61.647 66.667 0.00 0.00 38.77 5.14
1904 1975 2.203938 ACCACCACCATCCGGTCT 60.204 61.111 0.00 0.00 44.71 3.85
1934 2005 1.396301 GTCAGCAAGAAGATCAAGGCG 59.604 52.381 0.00 0.00 0.00 5.52
1936 2007 0.615331 AGCAAGAAGATCAAGGCGGA 59.385 50.000 0.00 0.00 0.00 5.54
2176 2247 1.870055 ATCACCGCAAAGGCAAGCAG 61.870 55.000 0.00 0.00 46.52 4.24
2219 2310 4.450976 TGCTCATATTTCCGTACTTGCAT 58.549 39.130 0.00 0.00 0.00 3.96
2224 2315 7.042051 GCTCATATTTCCGTACTTGCATAAAGA 60.042 37.037 0.00 0.00 39.38 2.52
2228 2319 5.856126 TTCCGTACTTGCATAAAGAAGTG 57.144 39.130 0.00 0.00 39.38 3.16
2229 2320 5.142061 TCCGTACTTGCATAAAGAAGTGA 57.858 39.130 0.00 0.00 39.38 3.41
2230 2321 5.168569 TCCGTACTTGCATAAAGAAGTGAG 58.831 41.667 0.00 0.00 39.38 3.51
2231 2322 4.929808 CCGTACTTGCATAAAGAAGTGAGT 59.070 41.667 0.00 0.00 39.38 3.41
2232 2323 5.408604 CCGTACTTGCATAAAGAAGTGAGTT 59.591 40.000 0.00 0.00 39.38 3.01
2233 2324 6.588756 CCGTACTTGCATAAAGAAGTGAGTTA 59.411 38.462 0.00 0.00 39.38 2.24
2234 2325 7.277981 CCGTACTTGCATAAAGAAGTGAGTTAT 59.722 37.037 0.00 0.00 39.38 1.89
2235 2326 9.297586 CGTACTTGCATAAAGAAGTGAGTTATA 57.702 33.333 0.00 0.00 39.38 0.98
2279 2419 2.605837 TTGCACTGTGGTAAGTCGAA 57.394 45.000 10.21 0.00 0.00 3.71
2327 2470 5.764686 TGATCTTGATCATTAATTCCACCCG 59.235 40.000 9.02 0.00 0.00 5.28
2334 2477 2.127027 TTAATTCCACCCGGCCACGT 62.127 55.000 2.24 0.00 38.78 4.49
2336 2479 2.808181 AATTCCACCCGGCCACGTAC 62.808 60.000 2.24 0.00 38.78 3.67
2359 2502 2.559668 TCCTCGTGAATCTAAACACCGT 59.440 45.455 0.00 0.00 34.05 4.83
2397 2540 5.770663 TCATGCCATCTACTCCTACTTAGAC 59.229 44.000 0.00 0.00 0.00 2.59
2420 2571 9.764363 AGACATAAGAAAATATCATGCGACTTA 57.236 29.630 0.00 0.00 0.00 2.24
2485 2765 1.852895 GACAATACGAGGTGCTTAGCG 59.147 52.381 0.00 0.00 0.00 4.26
2491 2771 2.537401 ACGAGGTGCTTAGCGAAATAC 58.463 47.619 0.00 0.00 0.00 1.89
2492 2772 2.165845 ACGAGGTGCTTAGCGAAATACT 59.834 45.455 0.00 0.00 0.00 2.12
2495 2775 2.158943 AGGTGCTTAGCGAAATACTCCC 60.159 50.000 0.00 0.00 0.00 4.30
2496 2776 2.158943 GGTGCTTAGCGAAATACTCCCT 60.159 50.000 0.00 0.00 0.00 4.20
2497 2777 3.124560 GTGCTTAGCGAAATACTCCCTC 58.875 50.000 0.00 0.00 0.00 4.30
2498 2778 2.102588 TGCTTAGCGAAATACTCCCTCC 59.897 50.000 0.00 0.00 0.00 4.30
2499 2779 2.862921 GCTTAGCGAAATACTCCCTCCG 60.863 54.545 0.00 0.00 0.00 4.63
2500 2780 2.062971 TAGCGAAATACTCCCTCCGT 57.937 50.000 0.00 0.00 0.00 4.69
2501 2781 1.192428 AGCGAAATACTCCCTCCGTT 58.808 50.000 0.00 0.00 0.00 4.44
2502 2782 1.136500 AGCGAAATACTCCCTCCGTTC 59.864 52.381 0.00 0.00 0.00 3.95
2503 2783 1.805495 GCGAAATACTCCCTCCGTTCC 60.805 57.143 0.00 0.00 0.00 3.62
2504 2784 1.755380 CGAAATACTCCCTCCGTTCCT 59.245 52.381 0.00 0.00 0.00 3.36
2505 2785 2.954318 CGAAATACTCCCTCCGTTCCTA 59.046 50.000 0.00 0.00 0.00 2.94
2506 2786 3.382546 CGAAATACTCCCTCCGTTCCTAA 59.617 47.826 0.00 0.00 0.00 2.69
2507 2787 4.142093 CGAAATACTCCCTCCGTTCCTAAA 60.142 45.833 0.00 0.00 0.00 1.85
2508 2788 5.452917 CGAAATACTCCCTCCGTTCCTAAAT 60.453 44.000 0.00 0.00 0.00 1.40
2509 2789 6.239120 CGAAATACTCCCTCCGTTCCTAAATA 60.239 42.308 0.00 0.00 0.00 1.40
2510 2790 7.525029 CGAAATACTCCCTCCGTTCCTAAATAT 60.525 40.741 0.00 0.00 0.00 1.28
2511 2791 8.731591 AAATACTCCCTCCGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
2512 2792 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
2513 2793 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2514 2794 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2515 2795 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2516 2796 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2517 2797 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2518 2798 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2519 2799 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
2520 2800 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
2580 2860 4.666512 ACGTAGTTTAGAGGGTAGGTTCA 58.333 43.478 0.00 0.00 37.78 3.18
2581 2861 4.460731 ACGTAGTTTAGAGGGTAGGTTCAC 59.539 45.833 0.00 0.00 37.78 3.18
2582 2862 4.704057 CGTAGTTTAGAGGGTAGGTTCACT 59.296 45.833 0.00 0.00 0.00 3.41
2583 2863 5.163673 CGTAGTTTAGAGGGTAGGTTCACTC 60.164 48.000 0.00 0.00 38.06 3.51
2584 2864 4.748701 AGTTTAGAGGGTAGGTTCACTCA 58.251 43.478 0.00 0.00 40.03 3.41
2585 2865 5.342866 AGTTTAGAGGGTAGGTTCACTCAT 58.657 41.667 0.00 0.00 40.03 2.90
2586 2866 5.785940 AGTTTAGAGGGTAGGTTCACTCATT 59.214 40.000 0.00 0.00 40.03 2.57
2587 2867 6.272558 AGTTTAGAGGGTAGGTTCACTCATTT 59.727 38.462 0.00 0.00 40.03 2.32
2588 2868 6.697641 TTAGAGGGTAGGTTCACTCATTTT 57.302 37.500 0.00 0.00 40.03 1.82
2589 2869 4.911390 AGAGGGTAGGTTCACTCATTTTG 58.089 43.478 0.00 0.00 40.03 2.44
2590 2870 3.421844 AGGGTAGGTTCACTCATTTTGC 58.578 45.455 0.00 0.00 0.00 3.68
2591 2871 3.074538 AGGGTAGGTTCACTCATTTTGCT 59.925 43.478 0.00 0.00 0.00 3.91
2592 2872 3.440522 GGGTAGGTTCACTCATTTTGCTC 59.559 47.826 0.00 0.00 0.00 4.26
2593 2873 3.440522 GGTAGGTTCACTCATTTTGCTCC 59.559 47.826 0.00 0.00 0.00 4.70
2594 2874 2.154462 AGGTTCACTCATTTTGCTCCG 58.846 47.619 0.00 0.00 0.00 4.63
2595 2875 1.880027 GGTTCACTCATTTTGCTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
2596 2876 3.071479 GGTTCACTCATTTTGCTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
2597 2877 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
2598 2878 4.437390 GGTTCACTCATTTTGCTCCGTATG 60.437 45.833 0.00 0.00 0.00 2.39
2599 2879 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2600 2880 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2601 2881 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2602 2882 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2603 2883 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2604 2884 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
2605 2885 5.348986 TCATTTTGCTCCGTATGTAGTCTC 58.651 41.667 0.00 0.00 0.00 3.36
2606 2886 3.795623 TTTGCTCCGTATGTAGTCTCC 57.204 47.619 0.00 0.00 0.00 3.71
2607 2887 2.730934 TGCTCCGTATGTAGTCTCCT 57.269 50.000 0.00 0.00 0.00 3.69
2608 2888 3.851458 TGCTCCGTATGTAGTCTCCTA 57.149 47.619 0.00 0.00 0.00 2.94
2609 2889 4.368565 TGCTCCGTATGTAGTCTCCTAT 57.631 45.455 0.00 0.00 0.00 2.57
2610 2890 4.726583 TGCTCCGTATGTAGTCTCCTATT 58.273 43.478 0.00 0.00 0.00 1.73
2611 2891 4.519350 TGCTCCGTATGTAGTCTCCTATTG 59.481 45.833 0.00 0.00 0.00 1.90
2612 2892 4.760715 GCTCCGTATGTAGTCTCCTATTGA 59.239 45.833 0.00 0.00 0.00 2.57
2613 2893 5.241064 GCTCCGTATGTAGTCTCCTATTGAA 59.759 44.000 0.00 0.00 0.00 2.69
2614 2894 6.238953 GCTCCGTATGTAGTCTCCTATTGAAA 60.239 42.308 0.00 0.00 0.00 2.69
2615 2895 7.524038 GCTCCGTATGTAGTCTCCTATTGAAAT 60.524 40.741 0.00 0.00 0.00 2.17
2616 2896 8.929260 TCCGTATGTAGTCTCCTATTGAAATA 57.071 34.615 0.00 0.00 0.00 1.40
2617 2897 9.529823 TCCGTATGTAGTCTCCTATTGAAATAT 57.470 33.333 0.00 0.00 0.00 1.28
2618 2898 9.790389 CCGTATGTAGTCTCCTATTGAAATATC 57.210 37.037 0.00 0.00 0.00 1.63
2650 2930 9.495382 AGACTTATATTTAGAAACAGAGGGAGT 57.505 33.333 0.00 0.00 0.00 3.85
2658 2938 7.844493 TTAGAAACAGAGGGAGTAGTAAACA 57.156 36.000 0.00 0.00 0.00 2.83
2659 2939 6.099159 AGAAACAGAGGGAGTAGTAAACAC 57.901 41.667 0.00 0.00 0.00 3.32
2660 2940 4.516365 AACAGAGGGAGTAGTAAACACG 57.484 45.455 0.00 0.00 0.00 4.49
2664 2944 5.163374 ACAGAGGGAGTAGTAAACACGTTTT 60.163 40.000 0.00 0.00 34.23 2.43
2666 2946 6.585322 CAGAGGGAGTAGTAAACACGTTTTAG 59.415 42.308 0.00 0.00 34.23 1.85
2680 2960 5.818857 ACACGTTTTAGTTCTTGCCTTCTAA 59.181 36.000 0.00 0.00 0.00 2.10
2716 3034 5.805728 TGGGGTGTTAAAGATCTCTTCTTC 58.194 41.667 0.00 0.00 44.09 2.87
2753 3071 3.418684 TTAAGTCTGCTCTGGTTTCCC 57.581 47.619 0.00 0.00 0.00 3.97
2784 3125 5.348451 CCTTTATTTTCGACAAAGGGCAATG 59.652 40.000 14.78 0.00 43.00 2.82
2788 3129 4.695217 TTTCGACAAAGGGCAATGTATC 57.305 40.909 0.00 0.00 0.00 2.24
2789 3130 3.342377 TCGACAAAGGGCAATGTATCA 57.658 42.857 0.00 0.00 0.00 2.15
2790 3131 3.680490 TCGACAAAGGGCAATGTATCAA 58.320 40.909 0.00 0.00 0.00 2.57
2791 3132 4.269183 TCGACAAAGGGCAATGTATCAAT 58.731 39.130 0.00 0.00 0.00 2.57
2792 3133 5.432645 TCGACAAAGGGCAATGTATCAATA 58.567 37.500 0.00 0.00 0.00 1.90
2793 3134 5.883115 TCGACAAAGGGCAATGTATCAATAA 59.117 36.000 0.00 0.00 0.00 1.40
2794 3135 6.545666 TCGACAAAGGGCAATGTATCAATAAT 59.454 34.615 0.00 0.00 0.00 1.28
2795 3136 7.068103 TCGACAAAGGGCAATGTATCAATAATT 59.932 33.333 0.00 0.00 0.00 1.40
2796 3137 7.379529 CGACAAAGGGCAATGTATCAATAATTC 59.620 37.037 0.00 0.00 0.00 2.17
2887 3228 7.369607 TGTGGTCATCAAATCTTGTAACATTG 58.630 34.615 0.00 0.00 0.00 2.82
2888 3229 6.808212 GTGGTCATCAAATCTTGTAACATTGG 59.192 38.462 0.00 0.00 0.00 3.16
2889 3230 6.718912 TGGTCATCAAATCTTGTAACATTGGA 59.281 34.615 0.00 0.00 0.00 3.53
2906 3279 1.025041 GGATCGCCTTCAACCAATCC 58.975 55.000 0.00 0.00 0.00 3.01
2916 3289 5.066505 GCCTTCAACCAATCCATAGTGTAAG 59.933 44.000 0.00 0.00 0.00 2.34
2945 3318 5.480642 AAAATGTGTGTGGCAATGGATAA 57.519 34.783 0.00 0.00 0.00 1.75
2974 3366 1.134401 TGGATCGTTGATGCTTCTCCC 60.134 52.381 0.88 0.00 31.64 4.30
3003 3395 7.452880 ACACTCATTAAGCACATGTGTAATT 57.547 32.000 26.01 19.44 35.74 1.40
3005 3397 8.450964 ACACTCATTAAGCACATGTGTAATTAC 58.549 33.333 26.01 8.75 35.74 1.89
3006 3398 8.668353 CACTCATTAAGCACATGTGTAATTACT 58.332 33.333 26.01 11.25 29.39 2.24
3007 3399 9.884636 ACTCATTAAGCACATGTGTAATTACTA 57.115 29.630 26.01 10.04 0.00 1.82
3009 3401 9.104965 TCATTAAGCACATGTGTAATTACTACC 57.895 33.333 26.01 6.22 0.00 3.18
3010 3402 7.852971 TTAAGCACATGTGTAATTACTACCC 57.147 36.000 26.01 5.71 0.00 3.69
3011 3403 4.777463 AGCACATGTGTAATTACTACCCC 58.223 43.478 26.01 5.51 0.00 4.95
3012 3404 3.881089 GCACATGTGTAATTACTACCCCC 59.119 47.826 26.01 1.35 0.00 5.40
3013 3405 4.124238 CACATGTGTAATTACTACCCCCG 58.876 47.826 18.03 2.22 0.00 5.73
3014 3406 3.135167 ACATGTGTAATTACTACCCCCGG 59.865 47.826 16.33 0.00 0.00 5.73
3015 3407 1.485895 TGTGTAATTACTACCCCCGGC 59.514 52.381 16.33 0.00 0.00 6.13
3024 3416 3.876255 TACCCCCGGCCCTTTCTGT 62.876 63.158 0.00 0.00 0.00 3.41
3035 3427 4.628074 GGCCCTTTCTGTTTTAAAAGTCC 58.372 43.478 0.00 0.00 31.88 3.85
3038 3430 5.597806 CCCTTTCTGTTTTAAAAGTCCCAC 58.402 41.667 0.00 0.00 31.88 4.61
3049 3441 1.477685 AAGTCCCACGTGTACCCCTG 61.478 60.000 15.65 0.00 0.00 4.45
3050 3442 1.909781 GTCCCACGTGTACCCCTGA 60.910 63.158 15.65 0.00 0.00 3.86
3051 3443 1.079621 TCCCACGTGTACCCCTGAT 59.920 57.895 15.65 0.00 0.00 2.90
3052 3444 0.974010 TCCCACGTGTACCCCTGATC 60.974 60.000 15.65 0.00 0.00 2.92
3053 3445 1.141019 CCACGTGTACCCCTGATCG 59.859 63.158 15.65 0.00 0.00 3.69
3055 3447 2.106332 CGTGTACCCCTGATCGGC 59.894 66.667 0.00 0.00 0.00 5.54
3056 3448 2.717044 CGTGTACCCCTGATCGGCA 61.717 63.158 0.00 0.00 0.00 5.69
3058 3450 0.180406 GTGTACCCCTGATCGGCAAT 59.820 55.000 0.00 0.00 0.00 3.56
3191 3587 9.635404 TTGGTAAAATCGTTGATTTAGGGATAT 57.365 29.630 5.29 0.00 40.77 1.63
3192 3588 9.062524 TGGTAAAATCGTTGATTTAGGGATATG 57.937 33.333 5.29 0.00 40.77 1.78
3208 3604 4.142026 GGGATATGTGTGGCCCTTTTAAAC 60.142 45.833 0.00 0.00 37.59 2.01
3209 3605 4.709886 GGATATGTGTGGCCCTTTTAAACT 59.290 41.667 0.00 0.00 0.00 2.66
3212 3608 2.312390 GTGTGGCCCTTTTAAACTGGA 58.688 47.619 0.00 0.00 0.00 3.86
3230 3626 1.340114 GGAAAAGGAGGGACGAGCAAT 60.340 52.381 0.00 0.00 0.00 3.56
3245 3641 9.216117 GGGACGAGCAATTTGTAGTATATAAAT 57.784 33.333 0.00 0.00 43.00 1.40
3291 3687 5.817816 GTCACTGATAATGGAGTTTGTAGGG 59.182 44.000 0.00 0.00 0.00 3.53
3305 3701 4.339335 AGGGTCAAGCAAGTCCCT 57.661 55.556 7.29 7.29 44.62 4.20
3306 3702 1.351350 GTAGGGTCAAGCAAGTCCCTT 59.649 52.381 16.01 4.15 46.99 3.95
3316 3712 3.956744 AGCAAGTCCCTTGGAGATTAAC 58.043 45.455 6.15 0.00 41.31 2.01
3333 3729 5.882557 AGATTAACCAGTAAGTGCAGAATGG 59.117 40.000 7.85 7.85 35.86 3.16
3334 3730 3.508845 AACCAGTAAGTGCAGAATGGT 57.491 42.857 8.99 8.99 42.70 3.55
3345 3741 1.470098 GCAGAATGGTTGCATTCGTCT 59.530 47.619 0.00 0.00 44.05 4.18
3347 3743 2.485426 CAGAATGGTTGCATTCGTCTGT 59.515 45.455 0.00 0.00 44.05 3.41
3348 3744 3.058016 CAGAATGGTTGCATTCGTCTGTT 60.058 43.478 0.00 0.00 44.05 3.16
3349 3745 3.569701 AGAATGGTTGCATTCGTCTGTTT 59.430 39.130 0.00 0.00 44.05 2.83
3350 3746 4.037923 AGAATGGTTGCATTCGTCTGTTTT 59.962 37.500 0.00 0.00 44.05 2.43
3351 3747 3.791973 TGGTTGCATTCGTCTGTTTTT 57.208 38.095 0.00 0.00 0.00 1.94
3417 3813 9.596677 CATTGCACAAAAACCATAATTTTACTG 57.403 29.630 0.00 0.00 31.50 2.74
3448 3844 4.372656 ACGTGTCTCTCAAAAAGGAGAAG 58.627 43.478 0.00 0.00 42.99 2.85
3467 3863 3.845781 AGACACTCCAACACACTGAAT 57.154 42.857 0.00 0.00 0.00 2.57
3468 3864 3.470709 AGACACTCCAACACACTGAATG 58.529 45.455 0.00 0.00 0.00 2.67
3469 3865 3.134623 AGACACTCCAACACACTGAATGA 59.865 43.478 0.00 0.00 0.00 2.57
3470 3866 3.206150 ACACTCCAACACACTGAATGAC 58.794 45.455 0.00 0.00 0.00 3.06
3471 3867 3.205338 CACTCCAACACACTGAATGACA 58.795 45.455 0.00 0.00 0.00 3.58
3472 3868 3.002656 CACTCCAACACACTGAATGACAC 59.997 47.826 0.00 0.00 0.00 3.67
3473 3869 3.205338 CTCCAACACACTGAATGACACA 58.795 45.455 0.00 0.00 0.00 3.72
3478 3874 3.609853 ACACACTGAATGACACAACAGT 58.390 40.909 0.00 0.00 43.05 3.55
3489 3885 7.281999 TGAATGACACAACAGTACTGAATCAAA 59.718 33.333 29.30 9.21 0.00 2.69
3491 3887 7.384439 TGACACAACAGTACTGAATCAAAAA 57.616 32.000 29.30 5.69 0.00 1.94
3514 3910 9.975218 AAAATATATATCACGAAGCCCCTATTT 57.025 29.630 0.00 0.00 0.00 1.40
3535 3931 5.828299 TTTTGGGTTATTTAGGCATCTCG 57.172 39.130 0.00 0.00 0.00 4.04
3541 3937 5.995897 GGGTTATTTAGGCATCTCGTGTAAT 59.004 40.000 0.00 0.00 0.00 1.89
3542 3938 7.156673 GGGTTATTTAGGCATCTCGTGTAATA 58.843 38.462 0.00 0.00 0.00 0.98
3543 3939 7.658575 GGGTTATTTAGGCATCTCGTGTAATAA 59.341 37.037 0.00 0.00 0.00 1.40
3544 3940 8.493547 GGTTATTTAGGCATCTCGTGTAATAAC 58.506 37.037 0.00 0.00 0.00 1.89
3583 3979 7.966246 ATCTCTGAACATCTCTATTCATTGC 57.034 36.000 0.00 0.00 34.43 3.56
3585 3981 7.506971 TCTCTGAACATCTCTATTCATTGCAT 58.493 34.615 0.00 0.00 34.43 3.96
3658 4055 1.079503 GAAAGCTGTGTGACCGGATC 58.920 55.000 9.46 2.18 0.00 3.36
3659 4056 0.321653 AAAGCTGTGTGACCGGATCC 60.322 55.000 9.46 0.00 0.00 3.36
3728 4125 9.639601 GGAAAAATAAAAGGCCACTATATATGC 57.360 33.333 5.01 0.00 0.00 3.14
3731 4128 8.940397 AAATAAAAGGCCACTATATATGCTGT 57.060 30.769 5.01 0.00 0.00 4.40
3733 4130 9.672673 AATAAAAGGCCACTATATATGCTGTAG 57.327 33.333 5.01 0.00 0.00 2.74
3734 4131 6.935240 AAAGGCCACTATATATGCTGTAGA 57.065 37.500 5.01 0.00 0.00 2.59
3735 4132 7.502060 AAAGGCCACTATATATGCTGTAGAT 57.498 36.000 5.01 0.00 0.00 1.98
3736 4133 8.609617 AAAGGCCACTATATATGCTGTAGATA 57.390 34.615 5.01 0.00 0.00 1.98
3737 4134 8.789767 AAGGCCACTATATATGCTGTAGATAT 57.210 34.615 5.01 0.00 0.00 1.63
3738 4135 8.789767 AGGCCACTATATATGCTGTAGATATT 57.210 34.615 5.01 0.00 0.00 1.28
3868 4289 5.924825 TGATAAGTGATTGATCGATCAGCAG 59.075 40.000 25.95 0.00 36.76 4.24
3932 4358 6.375736 TCATAGTTAAGAGATCAGCCGGATAG 59.624 42.308 5.05 0.00 36.00 2.08
3946 4372 4.938226 AGCCGGATAGAACTTTTTCTTCTG 59.062 41.667 5.05 0.00 39.17 3.02
4044 4472 3.608316 AACTTGTTGGCACACACAATT 57.392 38.095 3.87 0.00 39.29 2.32
4045 4473 3.608316 ACTTGTTGGCACACACAATTT 57.392 38.095 3.87 0.00 39.29 1.82
4046 4474 3.520569 ACTTGTTGGCACACACAATTTC 58.479 40.909 3.87 0.00 39.29 2.17
4047 4475 3.195396 ACTTGTTGGCACACACAATTTCT 59.805 39.130 3.87 0.00 39.29 2.52
4048 4476 4.400884 ACTTGTTGGCACACACAATTTCTA 59.599 37.500 3.87 0.00 39.29 2.10
4049 4477 4.300189 TGTTGGCACACACAATTTCTAC 57.700 40.909 0.00 0.00 39.29 2.59
4050 4478 3.951037 TGTTGGCACACACAATTTCTACT 59.049 39.130 0.00 0.00 39.29 2.57
4053 4481 5.590530 TGGCACACACAATTTCTACTTTT 57.409 34.783 0.00 0.00 0.00 2.27
4054 4482 5.971763 TGGCACACACAATTTCTACTTTTT 58.028 33.333 0.00 0.00 0.00 1.94
4078 4506 0.995024 CCAGTGAGGTTGGGGAGAAT 59.005 55.000 0.00 0.00 31.87 2.40
4088 4516 4.227527 AGGTTGGGGAGAATAAACTGTAGG 59.772 45.833 0.00 0.00 0.00 3.18
4144 4798 7.585867 CAGCATCTCATAATTTGATCTCAAGG 58.414 38.462 0.00 0.00 37.15 3.61
4145 4799 6.207025 AGCATCTCATAATTTGATCTCAAGGC 59.793 38.462 0.00 0.00 37.15 4.35
4162 4816 0.447801 GGCAAGGCTACACATTCACG 59.552 55.000 0.00 0.00 0.00 4.35
4248 4904 4.511082 CACATGATATACGTGGCACATCAA 59.489 41.667 19.09 0.00 44.52 2.57
4285 4941 2.945008 ACACTGTGGTATACATGCATGC 59.055 45.455 26.53 11.82 38.92 4.06
4328 5499 6.149973 CCCAAATACAGTACATATCTGGCATG 59.850 42.308 0.00 0.00 37.25 4.06
4467 5638 2.292292 ACATTACGGCGCCAATAATTCC 59.708 45.455 28.98 0.00 0.00 3.01
4507 5678 3.622163 CACCAAGAGAGAATGCTAAGCTG 59.378 47.826 0.00 0.00 0.00 4.24
4508 5679 2.613133 CCAAGAGAGAATGCTAAGCTGC 59.387 50.000 0.00 0.00 0.00 5.25
4585 5766 5.483231 ACTGAGAGAGAAATTCATGGTGAGA 59.517 40.000 0.00 0.00 0.00 3.27
4611 5792 1.324435 CTCGTTACGATGGTGTGCATG 59.676 52.381 8.21 0.00 34.61 4.06
4612 5793 0.247655 CGTTACGATGGTGTGCATGC 60.248 55.000 11.82 11.82 0.00 4.06
4613 5794 0.801872 GTTACGATGGTGTGCATGCA 59.198 50.000 18.46 18.46 0.00 3.96
4633 5824 7.875971 CATGCATGCATATGATCAGCTTATAT 58.124 34.615 31.73 2.53 36.36 0.86
4635 5826 8.603242 TGCATGCATATGATCAGCTTATATAG 57.397 34.615 18.46 0.00 36.36 1.31
4636 5827 8.426489 TGCATGCATATGATCAGCTTATATAGA 58.574 33.333 18.46 0.00 36.36 1.98
4637 5828 9.438228 GCATGCATATGATCAGCTTATATAGAT 57.562 33.333 14.21 0.00 36.36 1.98
4649 5840 9.736023 TCAGCTTATATAGATATATGTTGCACG 57.264 33.333 11.35 0.00 34.54 5.34
4650 5841 8.483218 CAGCTTATATAGATATATGTTGCACGC 58.517 37.037 0.00 0.00 30.77 5.34
4651 5842 8.197439 AGCTTATATAGATATATGTTGCACGCA 58.803 33.333 0.00 0.00 31.69 5.24
4652 5843 8.982685 GCTTATATAGATATATGTTGCACGCAT 58.017 33.333 7.90 7.90 31.69 4.73
4654 5845 8.298030 TATATAGATATATGTTGCACGCATGC 57.702 34.615 7.91 7.91 39.65 4.06
4655 5846 7.114811 TATATAGATATATGTTGCACGCATGCG 59.885 37.037 36.79 36.79 40.75 4.73
4783 5989 2.706190 GAGGGCAGTAACCAGGATACAT 59.294 50.000 9.45 0.00 41.41 2.29
4784 5990 3.901844 GAGGGCAGTAACCAGGATACATA 59.098 47.826 9.45 0.00 41.41 2.29
4785 5991 3.646637 AGGGCAGTAACCAGGATACATAC 59.353 47.826 9.45 0.00 41.41 2.39
4786 5992 3.646637 GGGCAGTAACCAGGATACATACT 59.353 47.826 9.45 0.00 41.41 2.12
4919 6138 7.218228 TGTTGAACTGTCTGCATCAATTAAT 57.782 32.000 1.79 0.00 34.62 1.40
4965 6188 8.695456 TGATCTTCGCAGCTAATTCCATATATA 58.305 33.333 0.00 0.00 0.00 0.86
4989 6212 2.306805 TGACAAGTCCCAGCATCTCATT 59.693 45.455 0.00 0.00 0.00 2.57
4991 6214 4.125703 GACAAGTCCCAGCATCTCATTAG 58.874 47.826 0.00 0.00 0.00 1.73
4993 6216 4.716784 ACAAGTCCCAGCATCTCATTAGTA 59.283 41.667 0.00 0.00 0.00 1.82
4994 6217 5.163364 ACAAGTCCCAGCATCTCATTAGTAG 60.163 44.000 0.00 0.00 0.00 2.57
4997 6220 5.536916 AGTCCCAGCATCTCATTAGTAGTAC 59.463 44.000 0.00 0.00 0.00 2.73
5053 6295 9.179909 TCCCGCTTTGAAATATTTTGATTAGTA 57.820 29.630 1.43 0.00 0.00 1.82
5104 6349 2.384899 CATGCATGCATGTCTTCTCG 57.615 50.000 40.30 20.89 46.20 4.04
5141 6386 6.423302 GTGAGTCATCCATGCAAGAATAGTAG 59.577 42.308 0.00 0.00 0.00 2.57
5142 6387 6.098838 TGAGTCATCCATGCAAGAATAGTAGT 59.901 38.462 0.00 0.00 0.00 2.73
5143 6388 7.287696 TGAGTCATCCATGCAAGAATAGTAGTA 59.712 37.037 0.00 0.00 0.00 1.82
5161 6406 6.785076 AGTAGTATTATCTAGCTCCTCTGCA 58.215 40.000 0.00 0.00 34.99 4.41
5174 6419 4.746089 GCTCCTCTGCATTATCTCATTGGT 60.746 45.833 0.00 0.00 0.00 3.67
5176 6421 4.657504 TCCTCTGCATTATCTCATTGGTCT 59.342 41.667 0.00 0.00 0.00 3.85
5177 6422 4.755629 CCTCTGCATTATCTCATTGGTCTG 59.244 45.833 0.00 0.00 0.00 3.51
5441 6686 5.601662 ACCGGTTAATACAGACAGATGATG 58.398 41.667 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.636206 GTGACCATTTCTAGGGTTCACATC 59.364 45.833 0.00 0.00 38.87 3.06
105 107 5.012148 ACTTCTGAGCGCCTGGTATATTATT 59.988 40.000 2.29 0.00 0.00 1.40
106 108 4.528596 ACTTCTGAGCGCCTGGTATATTAT 59.471 41.667 2.29 0.00 0.00 1.28
107 109 3.895656 ACTTCTGAGCGCCTGGTATATTA 59.104 43.478 2.29 0.00 0.00 0.98
125 127 2.159824 GCGGGCTTTAAGAGTCAACTTC 59.840 50.000 0.00 0.00 0.00 3.01
138 140 2.359850 TTGAGCGATGCGGGCTTT 60.360 55.556 0.00 0.00 41.72 3.51
139 141 3.127533 GTTGAGCGATGCGGGCTT 61.128 61.111 0.00 0.00 41.72 4.35
141 143 4.166011 GTGTTGAGCGATGCGGGC 62.166 66.667 0.00 0.00 0.00 6.13
144 153 0.519792 CACATGTGTTGAGCGATGCG 60.520 55.000 18.03 0.00 0.00 4.73
165 174 8.092687 CCCTACACAAATACTACAAACTACTGT 58.907 37.037 0.00 0.00 0.00 3.55
169 178 6.408869 GCCCCTACACAAATACTACAAACTA 58.591 40.000 0.00 0.00 0.00 2.24
172 181 4.591929 GGCCCCTACACAAATACTACAAA 58.408 43.478 0.00 0.00 0.00 2.83
173 182 3.369681 CGGCCCCTACACAAATACTACAA 60.370 47.826 0.00 0.00 0.00 2.41
178 187 0.253894 ACCGGCCCCTACACAAATAC 59.746 55.000 0.00 0.00 0.00 1.89
180 189 0.113580 AAACCGGCCCCTACACAAAT 59.886 50.000 0.00 0.00 0.00 2.32
200 209 5.941058 TCAAGTCCACACAACTCAACTAAAA 59.059 36.000 0.00 0.00 0.00 1.52
202 211 5.092554 TCAAGTCCACACAACTCAACTAA 57.907 39.130 0.00 0.00 0.00 2.24
203 212 4.746535 TCAAGTCCACACAACTCAACTA 57.253 40.909 0.00 0.00 0.00 2.24
204 213 3.627395 TCAAGTCCACACAACTCAACT 57.373 42.857 0.00 0.00 0.00 3.16
206 215 6.295249 TCATAATCAAGTCCACACAACTCAA 58.705 36.000 0.00 0.00 0.00 3.02
207 216 5.863965 TCATAATCAAGTCCACACAACTCA 58.136 37.500 0.00 0.00 0.00 3.41
208 217 6.372659 ACATCATAATCAAGTCCACACAACTC 59.627 38.462 0.00 0.00 0.00 3.01
210 219 6.500684 ACATCATAATCAAGTCCACACAAC 57.499 37.500 0.00 0.00 0.00 3.32
211 220 7.523293 AAACATCATAATCAAGTCCACACAA 57.477 32.000 0.00 0.00 0.00 3.33
212 221 7.523293 AAAACATCATAATCAAGTCCACACA 57.477 32.000 0.00 0.00 0.00 3.72
253 262 6.029607 GCATGAGTGATTCGCAATCTAAAAA 58.970 36.000 0.00 0.00 41.93 1.94
254 263 5.449041 GGCATGAGTGATTCGCAATCTAAAA 60.449 40.000 0.00 0.00 41.93 1.52
255 264 4.035558 GGCATGAGTGATTCGCAATCTAAA 59.964 41.667 0.00 0.00 41.93 1.85
256 265 3.561310 GGCATGAGTGATTCGCAATCTAA 59.439 43.478 0.00 0.00 41.93 2.10
257 266 3.133691 GGCATGAGTGATTCGCAATCTA 58.866 45.455 0.00 0.00 41.93 1.98
258 267 1.945394 GGCATGAGTGATTCGCAATCT 59.055 47.619 0.00 0.00 41.93 2.40
259 268 1.672363 TGGCATGAGTGATTCGCAATC 59.328 47.619 0.00 0.00 41.77 2.67
260 269 1.753930 TGGCATGAGTGATTCGCAAT 58.246 45.000 0.00 0.00 0.00 3.56
261 270 1.469703 CTTGGCATGAGTGATTCGCAA 59.530 47.619 0.00 0.00 0.00 4.85
262 271 1.089112 CTTGGCATGAGTGATTCGCA 58.911 50.000 0.00 0.00 0.00 5.10
263 272 0.248377 GCTTGGCATGAGTGATTCGC 60.248 55.000 4.32 0.00 0.00 4.70
264 273 0.027194 CGCTTGGCATGAGTGATTCG 59.973 55.000 4.32 0.00 0.00 3.34
265 274 1.089920 ACGCTTGGCATGAGTGATTC 58.910 50.000 8.88 0.00 0.00 2.52
266 275 1.200716 CAACGCTTGGCATGAGTGATT 59.799 47.619 10.32 0.00 0.00 2.57
267 276 0.806868 CAACGCTTGGCATGAGTGAT 59.193 50.000 10.32 0.00 0.00 3.06
268 277 0.534877 ACAACGCTTGGCATGAGTGA 60.535 50.000 10.32 0.00 34.12 3.41
269 278 0.311790 AACAACGCTTGGCATGAGTG 59.688 50.000 10.32 4.44 34.12 3.51
270 279 0.311790 CAACAACGCTTGGCATGAGT 59.688 50.000 4.32 4.13 34.12 3.41
271 280 0.592637 TCAACAACGCTTGGCATGAG 59.407 50.000 4.32 3.42 34.12 2.90
272 281 1.028130 TTCAACAACGCTTGGCATGA 58.972 45.000 4.32 0.00 34.12 3.07
273 282 2.068837 ATTCAACAACGCTTGGCATG 57.931 45.000 0.00 0.00 34.12 4.06
274 283 4.640201 AGTATATTCAACAACGCTTGGCAT 59.360 37.500 0.00 0.00 34.12 4.40
275 284 4.006989 AGTATATTCAACAACGCTTGGCA 58.993 39.130 0.00 0.00 34.12 4.92
276 285 4.616181 AGTATATTCAACAACGCTTGGC 57.384 40.909 3.42 0.00 34.12 4.52
277 286 8.394877 TCAAATAGTATATTCAACAACGCTTGG 58.605 33.333 3.42 0.00 34.12 3.61
278 287 9.935682 ATCAAATAGTATATTCAACAACGCTTG 57.064 29.630 0.00 0.00 0.00 4.01
294 303 9.605275 GCTGGATAAGATGCATATCAAATAGTA 57.395 33.333 0.00 0.00 35.70 1.82
295 304 8.327271 AGCTGGATAAGATGCATATCAAATAGT 58.673 33.333 0.00 0.00 35.70 2.12
296 305 8.734218 AGCTGGATAAGATGCATATCAAATAG 57.266 34.615 0.00 0.00 35.70 1.73
298 307 9.524496 TTTAGCTGGATAAGATGCATATCAAAT 57.476 29.630 0.00 0.00 35.70 2.32
299 308 8.922931 TTTAGCTGGATAAGATGCATATCAAA 57.077 30.769 0.00 0.00 35.70 2.69
300 309 8.953313 CATTTAGCTGGATAAGATGCATATCAA 58.047 33.333 0.00 0.00 35.70 2.57
301 310 8.105197 ACATTTAGCTGGATAAGATGCATATCA 58.895 33.333 0.00 0.00 35.70 2.15
302 311 8.503458 ACATTTAGCTGGATAAGATGCATATC 57.497 34.615 0.00 0.00 0.00 1.63
303 312 9.388506 GTACATTTAGCTGGATAAGATGCATAT 57.611 33.333 0.00 0.00 0.00 1.78
304 313 8.374743 TGTACATTTAGCTGGATAAGATGCATA 58.625 33.333 0.00 0.00 0.00 3.14
305 314 7.226441 TGTACATTTAGCTGGATAAGATGCAT 58.774 34.615 0.00 0.00 0.00 3.96
306 315 6.591001 TGTACATTTAGCTGGATAAGATGCA 58.409 36.000 0.00 0.00 0.00 3.96
307 316 7.355778 GTTGTACATTTAGCTGGATAAGATGC 58.644 38.462 0.00 0.00 0.00 3.91
308 317 7.438160 TCGTTGTACATTTAGCTGGATAAGATG 59.562 37.037 0.00 0.00 0.00 2.90
309 318 7.497595 TCGTTGTACATTTAGCTGGATAAGAT 58.502 34.615 0.00 0.00 0.00 2.40
310 319 6.869695 TCGTTGTACATTTAGCTGGATAAGA 58.130 36.000 0.00 0.00 0.00 2.10
311 320 7.534085 TTCGTTGTACATTTAGCTGGATAAG 57.466 36.000 0.00 0.00 0.00 1.73
312 321 7.908827 TTTCGTTGTACATTTAGCTGGATAA 57.091 32.000 0.00 0.00 0.00 1.75
313 322 7.908827 TTTTCGTTGTACATTTAGCTGGATA 57.091 32.000 0.00 0.00 0.00 2.59
314 323 6.811253 TTTTCGTTGTACATTTAGCTGGAT 57.189 33.333 0.00 0.00 0.00 3.41
315 324 6.205853 ACATTTTCGTTGTACATTTAGCTGGA 59.794 34.615 0.00 0.00 0.00 3.86
316 325 6.305399 CACATTTTCGTTGTACATTTAGCTGG 59.695 38.462 0.00 0.00 0.00 4.85
317 326 7.075121 TCACATTTTCGTTGTACATTTAGCTG 58.925 34.615 0.00 0.00 0.00 4.24
318 327 7.197071 TCACATTTTCGTTGTACATTTAGCT 57.803 32.000 0.00 0.00 0.00 3.32
319 328 7.748683 TCATCACATTTTCGTTGTACATTTAGC 59.251 33.333 0.00 0.00 0.00 3.09
320 329 9.605955 TTCATCACATTTTCGTTGTACATTTAG 57.394 29.630 0.00 0.00 0.00 1.85
321 330 9.952188 TTTCATCACATTTTCGTTGTACATTTA 57.048 25.926 0.00 0.00 0.00 1.40
322 331 8.864069 TTTCATCACATTTTCGTTGTACATTT 57.136 26.923 0.00 0.00 0.00 2.32
323 332 9.474920 AATTTCATCACATTTTCGTTGTACATT 57.525 25.926 0.00 0.00 0.00 2.71
324 333 8.914654 CAATTTCATCACATTTTCGTTGTACAT 58.085 29.630 0.00 0.00 0.00 2.29
325 334 7.380870 CCAATTTCATCACATTTTCGTTGTACA 59.619 33.333 0.00 0.00 0.00 2.90
326 335 7.593273 TCCAATTTCATCACATTTTCGTTGTAC 59.407 33.333 0.00 0.00 0.00 2.90
327 336 7.593273 GTCCAATTTCATCACATTTTCGTTGTA 59.407 33.333 0.00 0.00 0.00 2.41
328 337 6.420604 GTCCAATTTCATCACATTTTCGTTGT 59.579 34.615 0.00 0.00 0.00 3.32
329 338 6.420306 TGTCCAATTTCATCACATTTTCGTTG 59.580 34.615 0.00 0.00 0.00 4.10
330 339 6.511416 TGTCCAATTTCATCACATTTTCGTT 58.489 32.000 0.00 0.00 0.00 3.85
331 340 6.083098 TGTCCAATTTCATCACATTTTCGT 57.917 33.333 0.00 0.00 0.00 3.85
332 341 7.585286 AATGTCCAATTTCATCACATTTTCG 57.415 32.000 0.00 0.00 34.70 3.46
338 347 9.474920 GAAAAGTAAATGTCCAATTTCATCACA 57.525 29.630 0.00 0.00 0.00 3.58
339 348 9.474920 TGAAAAGTAAATGTCCAATTTCATCAC 57.525 29.630 0.00 0.00 32.26 3.06
343 352 9.829507 AACATGAAAAGTAAATGTCCAATTTCA 57.170 25.926 0.00 0.00 38.98 2.69
345 354 9.054922 CCAACATGAAAAGTAAATGTCCAATTT 57.945 29.630 0.00 0.00 33.48 1.82
346 355 8.210265 ACCAACATGAAAAGTAAATGTCCAATT 58.790 29.630 0.00 0.00 33.48 2.32
347 356 7.734942 ACCAACATGAAAAGTAAATGTCCAAT 58.265 30.769 0.00 0.00 33.48 3.16
375 384 2.937799 TCGTTTTCACCTTGTGTACCAC 59.062 45.455 0.00 0.00 34.79 4.16
376 385 3.263489 TCGTTTTCACCTTGTGTACCA 57.737 42.857 0.00 0.00 34.79 3.25
378 387 4.748102 TCTCATCGTTTTCACCTTGTGTAC 59.252 41.667 0.00 0.00 34.79 2.90
379 388 4.951254 TCTCATCGTTTTCACCTTGTGTA 58.049 39.130 0.00 0.00 34.79 2.90
380 389 3.804036 TCTCATCGTTTTCACCTTGTGT 58.196 40.909 0.00 0.00 34.79 3.72
381 390 4.692625 AGATCTCATCGTTTTCACCTTGTG 59.307 41.667 0.00 0.00 34.45 3.33
382 391 4.899502 AGATCTCATCGTTTTCACCTTGT 58.100 39.130 0.00 0.00 0.00 3.16
383 392 6.035435 CACTAGATCTCATCGTTTTCACCTTG 59.965 42.308 0.00 0.00 0.00 3.61
384 393 6.071334 TCACTAGATCTCATCGTTTTCACCTT 60.071 38.462 0.00 0.00 0.00 3.50
385 394 5.419155 TCACTAGATCTCATCGTTTTCACCT 59.581 40.000 0.00 0.00 0.00 4.00
394 403 4.891627 ACAGTGTCACTAGATCTCATCG 57.108 45.455 4.85 0.00 0.00 3.84
451 460 8.896658 AGTAGATACTCCAGTACATAAGAGGAT 58.103 37.037 0.00 0.00 32.44 3.24
452 461 8.277720 AGTAGATACTCCAGTACATAAGAGGA 57.722 38.462 0.00 0.00 32.72 3.71
453 462 9.439500 GTAGTAGATACTCCAGTACATAAGAGG 57.561 40.741 0.00 0.00 37.73 3.69
460 469 8.572185 CGTACTAGTAGTAGATACTCCAGTACA 58.428 40.741 22.50 4.64 46.07 2.90
462 471 8.572185 CACGTACTAGTAGTAGATACTCCAGTA 58.428 40.741 10.38 1.11 43.90 2.74
463 472 7.432869 CACGTACTAGTAGTAGATACTCCAGT 58.567 42.308 10.38 1.95 43.90 4.00
464 473 6.365789 GCACGTACTAGTAGTAGATACTCCAG 59.634 46.154 10.38 0.00 43.90 3.86
465 474 6.219473 GCACGTACTAGTAGTAGATACTCCA 58.781 44.000 10.38 0.00 43.90 3.86
466 475 5.637387 GGCACGTACTAGTAGTAGATACTCC 59.363 48.000 10.38 4.39 43.90 3.85
467 476 6.704512 GGCACGTACTAGTAGTAGATACTC 57.295 45.833 10.38 0.00 43.90 2.59
505 514 1.154908 GAACTGTTGTACGTGCGCG 60.155 57.895 19.78 19.78 44.93 6.86
507 516 0.931702 TTGGAACTGTTGTACGTGCG 59.068 50.000 0.00 0.00 0.00 5.34
510 519 4.696402 TGTTTTCTTGGAACTGTTGTACGT 59.304 37.500 0.00 0.00 0.00 3.57
511 520 5.163794 ACTGTTTTCTTGGAACTGTTGTACG 60.164 40.000 0.00 0.00 36.26 3.67
512 521 6.027749 CACTGTTTTCTTGGAACTGTTGTAC 58.972 40.000 0.00 0.00 37.16 2.90
513 522 5.124776 CCACTGTTTTCTTGGAACTGTTGTA 59.875 40.000 0.00 0.00 37.16 2.41
514 523 4.082245 CCACTGTTTTCTTGGAACTGTTGT 60.082 41.667 0.00 0.00 37.16 3.32
515 524 4.157656 TCCACTGTTTTCTTGGAACTGTTG 59.842 41.667 0.00 0.00 36.45 3.33
516 525 4.340617 TCCACTGTTTTCTTGGAACTGTT 58.659 39.130 0.00 0.00 36.45 3.16
568 595 6.367969 CGCACCCCACAGATAATACTAAATAC 59.632 42.308 0.00 0.00 0.00 1.89
638 671 3.375922 AGTTTTTGGTTGTGTGTCCTACG 59.624 43.478 0.00 0.00 0.00 3.51
718 751 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
719 752 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
720 753 5.048083 GCTAGAGAGAGAGAGAGAGAGAGAG 60.048 52.000 0.00 0.00 0.00 3.20
721 754 4.830046 GCTAGAGAGAGAGAGAGAGAGAGA 59.170 50.000 0.00 0.00 0.00 3.10
722 755 4.832266 AGCTAGAGAGAGAGAGAGAGAGAG 59.168 50.000 0.00 0.00 0.00 3.20
723 756 4.809193 AGCTAGAGAGAGAGAGAGAGAGA 58.191 47.826 0.00 0.00 0.00 3.10
724 757 5.336372 GCTAGCTAGAGAGAGAGAGAGAGAG 60.336 52.000 25.15 0.00 0.00 3.20
725 758 4.524714 GCTAGCTAGAGAGAGAGAGAGAGA 59.475 50.000 25.15 0.00 0.00 3.10
726 759 4.526262 AGCTAGCTAGAGAGAGAGAGAGAG 59.474 50.000 25.15 0.00 0.00 3.20
727 760 4.483950 AGCTAGCTAGAGAGAGAGAGAGA 58.516 47.826 25.15 0.00 0.00 3.10
728 761 4.881019 AGCTAGCTAGAGAGAGAGAGAG 57.119 50.000 25.15 0.00 0.00 3.20
729 762 4.220821 GCTAGCTAGCTAGAGAGAGAGAGA 59.779 50.000 42.59 14.29 46.56 3.10
730 763 4.499183 GCTAGCTAGCTAGAGAGAGAGAG 58.501 52.174 42.59 23.29 46.56 3.20
731 764 4.537135 GCTAGCTAGCTAGAGAGAGAGA 57.463 50.000 42.59 14.98 46.56 3.10
783 816 0.633921 TCTCTTCCTCCCTCTCCCTG 59.366 60.000 0.00 0.00 0.00 4.45
784 817 1.503347 GATCTCTTCCTCCCTCTCCCT 59.497 57.143 0.00 0.00 0.00 4.20
785 818 1.503347 AGATCTCTTCCTCCCTCTCCC 59.497 57.143 0.00 0.00 0.00 4.30
786 819 2.176798 TCAGATCTCTTCCTCCCTCTCC 59.823 54.545 0.00 0.00 0.00 3.71
787 820 3.593442 TCAGATCTCTTCCTCCCTCTC 57.407 52.381 0.00 0.00 0.00 3.20
823 866 1.849219 CTACGATTGAACTGCTCGCTC 59.151 52.381 0.00 0.00 35.89 5.03
824 867 1.469940 CCTACGATTGAACTGCTCGCT 60.470 52.381 0.00 0.00 35.89 4.93
825 868 0.924090 CCTACGATTGAACTGCTCGC 59.076 55.000 0.00 0.00 35.89 5.03
826 869 1.134367 TCCCTACGATTGAACTGCTCG 59.866 52.381 0.00 0.00 38.34 5.03
860 907 6.214191 TGGACTCTAGATGATGAACTCAAC 57.786 41.667 0.00 0.00 37.44 3.18
861 908 6.857437 TTGGACTCTAGATGATGAACTCAA 57.143 37.500 0.00 0.00 37.44 3.02
862 909 6.608808 TGATTGGACTCTAGATGATGAACTCA 59.391 38.462 0.00 0.00 38.53 3.41
876 923 0.034670 GCCCAGCTTGATTGGACTCT 60.035 55.000 0.00 0.00 37.96 3.24
907 954 6.215121 TGAATCAACAACAACACATCAATCC 58.785 36.000 0.00 0.00 0.00 3.01
924 971 5.745312 ACACTCACTACTCCATGAATCAA 57.255 39.130 0.00 0.00 0.00 2.57
973 1023 1.201647 TCAACCTCAACCTCGATCGAC 59.798 52.381 15.15 0.00 0.00 4.20
979 1029 0.390472 GCTCCTCAACCTCAACCTCG 60.390 60.000 0.00 0.00 0.00 4.63
990 1041 0.904865 AGTCGTCCATGGCTCCTCAA 60.905 55.000 6.96 0.00 0.00 3.02
991 1042 0.904865 AAGTCGTCCATGGCTCCTCA 60.905 55.000 6.96 0.00 0.00 3.86
993 1044 0.904865 TGAAGTCGTCCATGGCTCCT 60.905 55.000 6.96 0.00 0.00 3.69
995 1046 1.293924 CATGAAGTCGTCCATGGCTC 58.706 55.000 6.96 1.49 37.19 4.70
998 1052 1.012086 CTGCATGAAGTCGTCCATGG 58.988 55.000 4.97 4.97 40.22 3.66
1080 1134 0.108377 CAGCAGCACCACCGTATACA 60.108 55.000 3.32 0.00 0.00 2.29
1097 1151 4.463879 CACCGGAGCTGGAGCCAG 62.464 72.222 9.46 12.17 46.15 4.85
1618 1684 0.610687 AAGGACGAAGAGGAGCAAGG 59.389 55.000 0.00 0.00 0.00 3.61
1626 1697 4.098055 TGAAATCGAGAAGGACGAAGAG 57.902 45.455 0.00 0.00 42.80 2.85
1629 1700 4.181578 GGAATGAAATCGAGAAGGACGAA 58.818 43.478 0.00 0.00 42.80 3.85
1632 1703 3.307242 CGTGGAATGAAATCGAGAAGGAC 59.693 47.826 0.00 0.00 0.00 3.85
1634 1705 2.030946 GCGTGGAATGAAATCGAGAAGG 59.969 50.000 0.00 0.00 0.00 3.46
1635 1706 2.285256 CGCGTGGAATGAAATCGAGAAG 60.285 50.000 0.00 0.00 0.00 2.85
1637 1708 1.277326 CGCGTGGAATGAAATCGAGA 58.723 50.000 0.00 0.00 0.00 4.04
1642 1713 3.840890 TTTAAGCGCGTGGAATGAAAT 57.159 38.095 8.43 0.00 0.00 2.17
1653 1724 5.163893 TGGTTAAGAAGAAGATTTAAGCGCG 60.164 40.000 0.00 0.00 37.51 6.86
1656 1727 7.912773 GCAGATGGTTAAGAAGAAGATTTAAGC 59.087 37.037 0.00 0.00 36.09 3.09
1657 1728 8.950210 TGCAGATGGTTAAGAAGAAGATTTAAG 58.050 33.333 0.00 0.00 0.00 1.85
1658 1729 8.862325 TGCAGATGGTTAAGAAGAAGATTTAA 57.138 30.769 0.00 0.00 0.00 1.52
1659 1730 7.066284 GCTGCAGATGGTTAAGAAGAAGATTTA 59.934 37.037 20.43 0.00 0.00 1.40
1660 1731 6.127786 GCTGCAGATGGTTAAGAAGAAGATTT 60.128 38.462 20.43 0.00 0.00 2.17
1661 1732 5.356470 GCTGCAGATGGTTAAGAAGAAGATT 59.644 40.000 20.43 0.00 0.00 2.40
1662 1733 4.880696 GCTGCAGATGGTTAAGAAGAAGAT 59.119 41.667 20.43 0.00 0.00 2.40
1668 1739 5.560724 AGTTAAGCTGCAGATGGTTAAGAA 58.439 37.500 20.43 0.00 37.82 2.52
1670 1741 7.928706 AGTATAGTTAAGCTGCAGATGGTTAAG 59.071 37.037 20.43 0.00 37.82 1.85
1671 1742 7.792032 AGTATAGTTAAGCTGCAGATGGTTAA 58.208 34.615 20.43 11.17 35.76 2.01
1675 1746 5.468072 CCAAGTATAGTTAAGCTGCAGATGG 59.532 44.000 20.43 0.00 0.00 3.51
1678 1749 4.683400 GCCCAAGTATAGTTAAGCTGCAGA 60.683 45.833 20.43 0.00 0.00 4.26
1694 1765 7.961326 ACAATCTTAATAAATCTGCCCAAGT 57.039 32.000 0.00 0.00 0.00 3.16
1695 1766 9.903682 CATACAATCTTAATAAATCTGCCCAAG 57.096 33.333 0.00 0.00 0.00 3.61
1696 1767 9.420118 ACATACAATCTTAATAAATCTGCCCAA 57.580 29.630 0.00 0.00 0.00 4.12
1698 1769 7.809806 GCACATACAATCTTAATAAATCTGCCC 59.190 37.037 0.00 0.00 0.00 5.36
1699 1770 8.352201 TGCACATACAATCTTAATAAATCTGCC 58.648 33.333 0.00 0.00 0.00 4.85
1700 1771 9.390795 CTGCACATACAATCTTAATAAATCTGC 57.609 33.333 0.00 0.00 0.00 4.26
1708 1779 9.890629 TTCTTAGTCTGCACATACAATCTTAAT 57.109 29.630 0.00 0.00 0.00 1.40
1726 1797 9.877178 TCAAGGAGTAGATCAAAATTCTTAGTC 57.123 33.333 0.00 0.00 0.00 2.59
1730 1801 9.745018 TTCATCAAGGAGTAGATCAAAATTCTT 57.255 29.630 0.00 0.00 0.00 2.52
1731 1802 9.171877 GTTCATCAAGGAGTAGATCAAAATTCT 57.828 33.333 0.00 0.00 0.00 2.40
1732 1803 9.171877 AGTTCATCAAGGAGTAGATCAAAATTC 57.828 33.333 0.00 0.00 0.00 2.17
1734 1805 7.555554 CCAGTTCATCAAGGAGTAGATCAAAAT 59.444 37.037 0.00 0.00 0.00 1.82
1737 1808 5.485353 ACCAGTTCATCAAGGAGTAGATCAA 59.515 40.000 0.00 0.00 0.00 2.57
1739 1810 5.362430 AGACCAGTTCATCAAGGAGTAGATC 59.638 44.000 0.00 0.00 0.00 2.75
1740 1811 5.276440 AGACCAGTTCATCAAGGAGTAGAT 58.724 41.667 0.00 0.00 0.00 1.98
1742 1813 4.709397 AGAGACCAGTTCATCAAGGAGTAG 59.291 45.833 0.00 0.00 0.00 2.57
1743 1814 4.678256 AGAGACCAGTTCATCAAGGAGTA 58.322 43.478 0.00 0.00 0.00 2.59
1744 1815 3.513515 GAGAGACCAGTTCATCAAGGAGT 59.486 47.826 0.00 0.00 0.00 3.85
1745 1816 3.118811 GGAGAGACCAGTTCATCAAGGAG 60.119 52.174 0.00 0.00 38.79 3.69
1746 1817 2.834549 GGAGAGACCAGTTCATCAAGGA 59.165 50.000 0.00 0.00 38.79 3.36
1747 1818 2.417924 CGGAGAGACCAGTTCATCAAGG 60.418 54.545 0.00 0.00 38.90 3.61
1748 1819 2.493675 TCGGAGAGACCAGTTCATCAAG 59.506 50.000 0.00 0.00 38.90 3.02
1749 1820 2.231478 GTCGGAGAGACCAGTTCATCAA 59.769 50.000 0.00 0.00 43.95 2.57
1762 1833 1.568606 CATCTGCACATGTCGGAGAG 58.431 55.000 18.73 10.92 36.95 3.20
1764 1835 0.176449 TCCATCTGCACATGTCGGAG 59.824 55.000 0.00 2.86 0.00 4.63
1765 1836 0.108186 GTCCATCTGCACATGTCGGA 60.108 55.000 0.00 2.21 0.00 4.55
1766 1837 0.391528 TGTCCATCTGCACATGTCGG 60.392 55.000 0.00 0.00 0.00 4.79
1767 1838 1.395954 CTTGTCCATCTGCACATGTCG 59.604 52.381 0.00 0.00 0.00 4.35
1768 1839 1.741706 CCTTGTCCATCTGCACATGTC 59.258 52.381 0.00 0.00 0.00 3.06
1769 1840 1.830279 CCTTGTCCATCTGCACATGT 58.170 50.000 1.10 0.00 0.00 3.21
1770 1841 0.454600 GCCTTGTCCATCTGCACATG 59.545 55.000 0.00 0.00 0.00 3.21
1835 1906 1.909302 TCCTCCATGGTCTTCACCTTC 59.091 52.381 12.58 0.00 44.17 3.46
1934 2005 1.508746 GTCGTCGTCTTCGTCGTCC 60.509 63.158 7.05 0.00 45.27 4.79
1936 2007 2.169563 CGTCGTCGTCTTCGTCGT 59.830 61.111 7.05 0.00 45.27 4.34
1943 2014 2.048784 TCCTCGTCGTCGTCGTCT 60.049 61.111 11.41 0.00 38.33 4.18
2228 2319 8.952278 ACTCGATCTTGACTCCATATATAACTC 58.048 37.037 0.00 0.00 0.00 3.01
2229 2320 8.735315 CACTCGATCTTGACTCCATATATAACT 58.265 37.037 0.00 0.00 0.00 2.24
2230 2321 7.486551 GCACTCGATCTTGACTCCATATATAAC 59.513 40.741 0.00 0.00 0.00 1.89
2231 2322 7.176690 TGCACTCGATCTTGACTCCATATATAA 59.823 37.037 0.00 0.00 0.00 0.98
2232 2323 6.659242 TGCACTCGATCTTGACTCCATATATA 59.341 38.462 0.00 0.00 0.00 0.86
2233 2324 5.478332 TGCACTCGATCTTGACTCCATATAT 59.522 40.000 0.00 0.00 0.00 0.86
2234 2325 4.827284 TGCACTCGATCTTGACTCCATATA 59.173 41.667 0.00 0.00 0.00 0.86
2235 2326 3.638627 TGCACTCGATCTTGACTCCATAT 59.361 43.478 0.00 0.00 0.00 1.78
2239 2330 2.370281 TTGCACTCGATCTTGACTCC 57.630 50.000 0.00 0.00 0.00 3.85
2304 2447 5.182001 CCGGGTGGAATTAATGATCAAGATC 59.818 44.000 0.00 3.12 37.49 2.75
2336 2479 2.921754 GGTGTTTAGATTCACGAGGACG 59.078 50.000 0.00 0.00 45.75 4.79
2337 2480 2.921754 CGGTGTTTAGATTCACGAGGAC 59.078 50.000 0.00 0.00 35.67 3.85
2341 2484 3.243468 TGTCACGGTGTTTAGATTCACGA 60.243 43.478 8.17 0.00 35.67 4.35
2359 2502 0.466739 GCATGAGCCATCCCATGTCA 60.467 55.000 0.00 0.00 41.49 3.58
2438 2589 3.283751 AGTAGACGAGGATGAGGTGAAG 58.716 50.000 0.00 0.00 0.00 3.02
2485 2765 5.349061 TTTAGGAACGGAGGGAGTATTTC 57.651 43.478 0.00 0.00 0.00 2.17
2491 2771 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2492 2772 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2546 2826 9.669887 CCCTCTAAACTACGTCTATATACATCT 57.330 37.037 0.00 0.00 0.00 2.90
2547 2827 9.447157 ACCCTCTAAACTACGTCTATATACATC 57.553 37.037 0.00 0.00 0.00 3.06
2549 2829 9.935241 CTACCCTCTAAACTACGTCTATATACA 57.065 37.037 0.00 0.00 0.00 2.29
2550 2830 9.377312 CCTACCCTCTAAACTACGTCTATATAC 57.623 40.741 0.00 0.00 0.00 1.47
2551 2831 9.105844 ACCTACCCTCTAAACTACGTCTATATA 57.894 37.037 0.00 0.00 0.00 0.86
2552 2832 7.983363 ACCTACCCTCTAAACTACGTCTATAT 58.017 38.462 0.00 0.00 0.00 0.86
2553 2833 7.380423 ACCTACCCTCTAAACTACGTCTATA 57.620 40.000 0.00 0.00 0.00 1.31
2554 2834 6.259346 ACCTACCCTCTAAACTACGTCTAT 57.741 41.667 0.00 0.00 0.00 1.98
2555 2835 5.700402 ACCTACCCTCTAAACTACGTCTA 57.300 43.478 0.00 0.00 0.00 2.59
2556 2836 4.582973 ACCTACCCTCTAAACTACGTCT 57.417 45.455 0.00 0.00 0.00 4.18
2557 2837 4.702131 TGAACCTACCCTCTAAACTACGTC 59.298 45.833 0.00 0.00 0.00 4.34
2558 2838 4.460731 GTGAACCTACCCTCTAAACTACGT 59.539 45.833 0.00 0.00 0.00 3.57
2559 2839 4.704057 AGTGAACCTACCCTCTAAACTACG 59.296 45.833 0.00 0.00 0.00 3.51
2560 2840 5.713861 TGAGTGAACCTACCCTCTAAACTAC 59.286 44.000 0.00 0.00 0.00 2.73
2561 2841 5.895807 TGAGTGAACCTACCCTCTAAACTA 58.104 41.667 0.00 0.00 0.00 2.24
2562 2842 4.748701 TGAGTGAACCTACCCTCTAAACT 58.251 43.478 0.00 0.00 0.00 2.66
2563 2843 5.678955 ATGAGTGAACCTACCCTCTAAAC 57.321 43.478 0.00 0.00 0.00 2.01
2564 2844 6.697641 AAATGAGTGAACCTACCCTCTAAA 57.302 37.500 0.00 0.00 0.00 1.85
2565 2845 6.472887 CAAAATGAGTGAACCTACCCTCTAA 58.527 40.000 0.00 0.00 0.00 2.10
2566 2846 5.570844 GCAAAATGAGTGAACCTACCCTCTA 60.571 44.000 0.00 0.00 0.00 2.43
2567 2847 4.807643 GCAAAATGAGTGAACCTACCCTCT 60.808 45.833 0.00 0.00 0.00 3.69
2568 2848 3.440522 GCAAAATGAGTGAACCTACCCTC 59.559 47.826 0.00 0.00 0.00 4.30
2569 2849 3.074538 AGCAAAATGAGTGAACCTACCCT 59.925 43.478 0.00 0.00 0.00 4.34
2570 2850 3.421844 AGCAAAATGAGTGAACCTACCC 58.578 45.455 0.00 0.00 0.00 3.69
2571 2851 3.440522 GGAGCAAAATGAGTGAACCTACC 59.559 47.826 0.00 0.00 0.00 3.18
2572 2852 3.125316 CGGAGCAAAATGAGTGAACCTAC 59.875 47.826 0.00 0.00 0.00 3.18
2573 2853 3.244422 ACGGAGCAAAATGAGTGAACCTA 60.244 43.478 0.00 0.00 0.00 3.08
2574 2854 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
2575 2855 1.880027 ACGGAGCAAAATGAGTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
2576 2856 4.154195 ACATACGGAGCAAAATGAGTGAAC 59.846 41.667 0.00 0.00 0.00 3.18
2577 2857 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2578 2858 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2579 2859 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2580 2860 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2581 2861 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
2582 2862 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
2583 2863 4.508124 GGAGACTACATACGGAGCAAAATG 59.492 45.833 0.00 0.00 0.00 2.32
2584 2864 4.406003 AGGAGACTACATACGGAGCAAAAT 59.594 41.667 0.00 0.00 40.61 1.82
2585 2865 3.767673 AGGAGACTACATACGGAGCAAAA 59.232 43.478 0.00 0.00 40.61 2.44
2586 2866 3.362706 AGGAGACTACATACGGAGCAAA 58.637 45.455 0.00 0.00 40.61 3.68
2587 2867 3.014304 AGGAGACTACATACGGAGCAA 57.986 47.619 0.00 0.00 40.61 3.91
2588 2868 2.730934 AGGAGACTACATACGGAGCA 57.269 50.000 0.00 0.00 40.61 4.26
2624 2904 9.495382 ACTCCCTCTGTTTCTAAATATAAGTCT 57.505 33.333 0.00 0.00 0.00 3.24
2632 2912 8.877195 TGTTTACTACTCCCTCTGTTTCTAAAT 58.123 33.333 0.00 0.00 0.00 1.40
2633 2913 8.146412 GTGTTTACTACTCCCTCTGTTTCTAAA 58.854 37.037 0.00 0.00 0.00 1.85
2634 2914 7.522725 CGTGTTTACTACTCCCTCTGTTTCTAA 60.523 40.741 0.00 0.00 0.00 2.10
2635 2915 6.072286 CGTGTTTACTACTCCCTCTGTTTCTA 60.072 42.308 0.00 0.00 0.00 2.10
2636 2916 5.278858 CGTGTTTACTACTCCCTCTGTTTCT 60.279 44.000 0.00 0.00 0.00 2.52
2637 2917 4.922103 CGTGTTTACTACTCCCTCTGTTTC 59.078 45.833 0.00 0.00 0.00 2.78
2638 2918 4.343239 ACGTGTTTACTACTCCCTCTGTTT 59.657 41.667 0.00 0.00 0.00 2.83
2639 2919 3.893813 ACGTGTTTACTACTCCCTCTGTT 59.106 43.478 0.00 0.00 0.00 3.16
2640 2920 3.494332 ACGTGTTTACTACTCCCTCTGT 58.506 45.455 0.00 0.00 0.00 3.41
2641 2921 4.516365 AACGTGTTTACTACTCCCTCTG 57.484 45.455 0.00 0.00 0.00 3.35
2642 2922 5.541953 AAAACGTGTTTACTACTCCCTCT 57.458 39.130 0.00 0.00 31.63 3.69
2643 2923 6.450545 ACTAAAACGTGTTTACTACTCCCTC 58.549 40.000 0.00 0.00 31.63 4.30
2644 2924 6.410942 ACTAAAACGTGTTTACTACTCCCT 57.589 37.500 0.00 0.00 31.63 4.20
2645 2925 6.925718 AGAACTAAAACGTGTTTACTACTCCC 59.074 38.462 0.00 0.00 31.63 4.30
2646 2926 7.936950 AGAACTAAAACGTGTTTACTACTCC 57.063 36.000 0.00 0.00 31.63 3.85
2647 2927 7.791131 GCAAGAACTAAAACGTGTTTACTACTC 59.209 37.037 0.00 0.00 31.63 2.59
2648 2928 7.254556 GGCAAGAACTAAAACGTGTTTACTACT 60.255 37.037 0.00 0.00 31.63 2.57
2649 2929 6.847792 GGCAAGAACTAAAACGTGTTTACTAC 59.152 38.462 0.00 0.00 31.63 2.73
2650 2930 6.762661 AGGCAAGAACTAAAACGTGTTTACTA 59.237 34.615 0.00 0.00 31.63 1.82
2651 2931 5.587443 AGGCAAGAACTAAAACGTGTTTACT 59.413 36.000 0.00 0.00 31.63 2.24
2652 2932 5.813717 AGGCAAGAACTAAAACGTGTTTAC 58.186 37.500 0.00 0.00 31.63 2.01
2653 2933 6.316890 AGAAGGCAAGAACTAAAACGTGTTTA 59.683 34.615 0.00 0.00 31.63 2.01
2654 2934 4.976224 AGGCAAGAACTAAAACGTGTTT 57.024 36.364 0.00 0.00 0.00 2.83
2655 2935 4.638865 AGAAGGCAAGAACTAAAACGTGTT 59.361 37.500 0.00 0.00 0.00 3.32
2656 2936 4.196971 AGAAGGCAAGAACTAAAACGTGT 58.803 39.130 0.00 0.00 0.00 4.49
2657 2937 4.813296 AGAAGGCAAGAACTAAAACGTG 57.187 40.909 0.00 0.00 0.00 4.49
2658 2938 6.017357 CCTTTAGAAGGCAAGAACTAAAACGT 60.017 38.462 0.00 0.00 42.78 3.99
2659 2939 6.371389 CCTTTAGAAGGCAAGAACTAAAACG 58.629 40.000 0.00 0.00 42.78 3.60
2680 2960 0.999712 CACCCCATTCTACACCCCTT 59.000 55.000 0.00 0.00 0.00 3.95
2686 2966 6.443849 AGAGATCTTTAACACCCCATTCTACA 59.556 38.462 0.00 0.00 0.00 2.74
2687 2967 6.890293 AGAGATCTTTAACACCCCATTCTAC 58.110 40.000 0.00 0.00 0.00 2.59
2688 2968 7.403231 AGAAGAGATCTTTAACACCCCATTCTA 59.597 37.037 0.00 0.00 33.39 2.10
2689 2969 6.216456 AGAAGAGATCTTTAACACCCCATTCT 59.784 38.462 0.00 0.00 33.39 2.40
2690 2970 6.418946 AGAAGAGATCTTTAACACCCCATTC 58.581 40.000 0.00 0.00 33.39 2.67
2753 3071 6.462073 TTTGTCGAAAATAAAGGAGAGACG 57.538 37.500 0.00 0.00 0.00 4.18
2861 3202 7.707624 ATGTTACAAGATTTGATGACCACAT 57.292 32.000 0.00 0.00 39.67 3.21
2866 3207 7.641411 CGATCCAATGTTACAAGATTTGATGAC 59.359 37.037 3.93 0.00 28.44 3.06
2887 3228 1.025041 GGATTGGTTGAAGGCGATCC 58.975 55.000 0.00 0.00 0.00 3.36
2888 3229 1.750193 TGGATTGGTTGAAGGCGATC 58.250 50.000 0.00 0.00 0.00 3.69
2889 3230 2.442236 ATGGATTGGTTGAAGGCGAT 57.558 45.000 0.00 0.00 0.00 4.58
2936 3309 6.369890 ACGATCCATCTTCGAATTATCCATTG 59.630 38.462 0.00 0.00 39.81 2.82
2945 3318 3.496130 GCATCAACGATCCATCTTCGAAT 59.504 43.478 0.00 0.00 39.81 3.34
2974 3366 4.456911 ACATGTGCTTAATGAGTGTTCCTG 59.543 41.667 0.00 0.00 0.00 3.86
3003 3395 1.690283 GAAAGGGCCGGGGGTAGTA 60.690 63.158 2.18 0.00 0.00 1.82
3005 3397 2.691252 AGAAAGGGCCGGGGGTAG 60.691 66.667 2.18 0.00 0.00 3.18
3006 3398 3.012722 CAGAAAGGGCCGGGGGTA 61.013 66.667 2.18 0.00 0.00 3.69
3009 3401 0.251430 TAAAACAGAAAGGGCCGGGG 60.251 55.000 2.18 0.00 0.00 5.73
3010 3402 1.623163 TTAAAACAGAAAGGGCCGGG 58.377 50.000 2.18 0.00 0.00 5.73
3011 3403 3.069016 ACTTTTAAAACAGAAAGGGCCGG 59.931 43.478 0.00 0.00 37.22 6.13
3012 3404 4.295870 GACTTTTAAAACAGAAAGGGCCG 58.704 43.478 0.00 0.00 37.22 6.13
3013 3405 4.502604 GGGACTTTTAAAACAGAAAGGGCC 60.503 45.833 0.00 0.00 37.22 5.80
3014 3406 4.100344 TGGGACTTTTAAAACAGAAAGGGC 59.900 41.667 0.00 0.00 37.22 5.19
3015 3407 5.597806 GTGGGACTTTTAAAACAGAAAGGG 58.402 41.667 0.00 0.00 37.22 3.95
3024 3416 3.882288 GGGTACACGTGGGACTTTTAAAA 59.118 43.478 21.57 0.00 0.00 1.52
3035 3427 1.141019 CGATCAGGGGTACACGTGG 59.859 63.158 21.57 1.66 0.00 4.94
3038 3430 2.106332 GCCGATCAGGGGTACACG 59.894 66.667 0.00 0.00 41.48 4.49
3049 3441 5.885881 TGTTATGTTGGTTAATTGCCGATC 58.114 37.500 0.00 0.00 0.00 3.69
3050 3442 5.906113 TGTTATGTTGGTTAATTGCCGAT 57.094 34.783 0.00 0.00 0.00 4.18
3051 3443 5.416013 TCATGTTATGTTGGTTAATTGCCGA 59.584 36.000 0.00 0.00 0.00 5.54
3052 3444 5.645624 TCATGTTATGTTGGTTAATTGCCG 58.354 37.500 0.00 0.00 0.00 5.69
3053 3445 6.630071 ACTCATGTTATGTTGGTTAATTGCC 58.370 36.000 0.00 0.00 0.00 4.52
3163 3559 7.992008 TCCCTAAATCAACGATTTTACCAATC 58.008 34.615 7.22 0.00 41.64 2.67
3171 3567 7.013274 CCACACATATCCCTAAATCAACGATTT 59.987 37.037 7.11 7.11 43.49 2.17
3175 3571 4.024048 GCCACACATATCCCTAAATCAACG 60.024 45.833 0.00 0.00 0.00 4.10
3178 3574 3.181434 GGGCCACACATATCCCTAAATCA 60.181 47.826 4.39 0.00 35.87 2.57
3191 3587 2.035632 CCAGTTTAAAAGGGCCACACA 58.964 47.619 6.18 0.00 0.00 3.72
3192 3588 2.312390 TCCAGTTTAAAAGGGCCACAC 58.688 47.619 6.18 0.00 0.00 3.82
3208 3604 0.391793 GCTCGTCCCTCCTTTTCCAG 60.392 60.000 0.00 0.00 0.00 3.86
3209 3605 1.125093 TGCTCGTCCCTCCTTTTCCA 61.125 55.000 0.00 0.00 0.00 3.53
3212 3608 2.558359 CAAATTGCTCGTCCCTCCTTTT 59.442 45.455 0.00 0.00 0.00 2.27
3245 3641 4.892934 ACAACTTTCTTAGGGCATCAACAA 59.107 37.500 0.00 0.00 0.00 2.83
3249 3645 4.072131 GTGACAACTTTCTTAGGGCATCA 58.928 43.478 0.00 0.00 0.00 3.07
3305 3701 5.012664 TCTGCACTTACTGGTTAATCTCCAA 59.987 40.000 0.00 0.00 34.35 3.53
3306 3702 4.530553 TCTGCACTTACTGGTTAATCTCCA 59.469 41.667 0.00 0.00 0.00 3.86
3316 3712 2.095059 GCAACCATTCTGCACTTACTGG 60.095 50.000 0.00 0.00 39.69 4.00
3382 3778 2.542020 TTTGTGCAATGAGAGACCGA 57.458 45.000 0.00 0.00 0.00 4.69
3417 3813 5.464965 TTTGAGAGACACGTTTTCTTGAC 57.535 39.130 0.00 0.00 0.00 3.18
3427 3823 4.446051 GTCTTCTCCTTTTTGAGAGACACG 59.554 45.833 11.96 0.00 42.10 4.49
3448 3844 3.248602 GTCATTCAGTGTGTTGGAGTGTC 59.751 47.826 0.00 0.00 0.00 3.67
3461 3857 5.276461 TCAGTACTGTTGTGTCATTCAGT 57.724 39.130 21.99 10.65 42.56 3.41
3467 3863 6.993786 TTTTGATTCAGTACTGTTGTGTCA 57.006 33.333 21.99 15.63 0.00 3.58
3489 3885 9.975218 AAAATAGGGGCTTCGTGATATATATTT 57.025 29.630 0.00 0.00 0.00 1.40
3491 3887 9.396022 CAAAAATAGGGGCTTCGTGATATATAT 57.604 33.333 0.00 0.00 0.00 0.86
3514 3910 4.638421 CACGAGATGCCTAAATAACCCAAA 59.362 41.667 0.00 0.00 0.00 3.28
3541 3937 8.141298 TCAGAGATAAATGTACAAGTGGGTTA 57.859 34.615 0.00 0.00 0.00 2.85
3542 3938 7.016153 TCAGAGATAAATGTACAAGTGGGTT 57.984 36.000 0.00 0.00 0.00 4.11
3543 3939 6.620877 TCAGAGATAAATGTACAAGTGGGT 57.379 37.500 0.00 0.00 0.00 4.51
3544 3940 6.878923 TGTTCAGAGATAAATGTACAAGTGGG 59.121 38.462 0.00 0.00 0.00 4.61
3580 3976 3.556633 CCTGCCCATACAAACAAATGCAA 60.557 43.478 0.00 0.00 0.00 4.08
3583 3979 3.959535 ACCTGCCCATACAAACAAATG 57.040 42.857 0.00 0.00 0.00 2.32
3585 3981 4.107127 AGTACCTGCCCATACAAACAAA 57.893 40.909 0.00 0.00 0.00 2.83
3658 4055 1.078426 GGGGTTGTCACATCTCCGG 60.078 63.158 0.00 0.00 0.00 5.14
3659 4056 0.036164 TTGGGGTTGTCACATCTCCG 59.964 55.000 0.07 0.00 0.00 4.63
3737 4134 9.323985 CCAAAAACTAATTCTTGGTTGATCAAA 57.676 29.630 10.35 0.00 34.40 2.69
3738 4135 7.930865 CCCAAAAACTAATTCTTGGTTGATCAA 59.069 33.333 3.38 3.38 37.25 2.57
3847 4268 4.100035 ACCTGCTGATCGATCAATCACTTA 59.900 41.667 27.09 8.99 36.18 2.24
3868 4289 2.223377 CGCTTGAGTCCAACAACTAACC 59.777 50.000 0.00 0.00 0.00 2.85
3967 4394 2.605338 CGACCCAACTGCATGAAAAGTG 60.605 50.000 0.00 0.00 0.00 3.16
4029 4457 4.568152 AGTAGAAATTGTGTGTGCCAAC 57.432 40.909 0.00 0.00 0.00 3.77
4078 4506 4.649674 AGCGGAATGAGATCCTACAGTTTA 59.350 41.667 0.00 0.00 37.34 2.01
4088 4516 2.879002 TGAGACAGCGGAATGAGATC 57.121 50.000 0.00 0.00 0.00 2.75
4144 4798 0.179189 GCGTGAATGTGTAGCCTTGC 60.179 55.000 0.00 0.00 0.00 4.01
4145 4799 1.155889 TGCGTGAATGTGTAGCCTTG 58.844 50.000 0.00 0.00 0.00 3.61
4162 4816 9.720569 CACATTGTTTAAATACACGTTAATTGC 57.279 29.630 0.00 0.00 0.00 3.56
4192 4848 0.332632 AGCATTTCCCAGCTAAGGCA 59.667 50.000 6.39 0.00 39.78 4.75
4198 4854 0.407139 ACCTCAAGCATTTCCCAGCT 59.593 50.000 0.00 0.00 44.31 4.24
4248 4904 8.635765 ACCACAGTGTATCTCATGTAATTTTT 57.364 30.769 0.00 0.00 0.00 1.94
4315 5486 9.407380 TCAGTTAATTAAACATGCCAGATATGT 57.593 29.630 0.00 0.00 40.83 2.29
4370 5541 3.084786 CCCTCTTCCACCTGAAATCAAC 58.915 50.000 0.00 0.00 31.06 3.18
4467 5638 2.782192 GGTGACACTATTTCGATCGTCG 59.218 50.000 15.94 2.97 42.10 5.12
4516 5693 0.326264 AAAGGGCTGATCGACTTGCT 59.674 50.000 0.00 0.00 0.00 3.91
4585 5766 3.071479 ACACCATCGTAACGAGCAATTT 58.929 40.909 0.00 0.00 39.91 1.82
4611 5792 8.828688 TCTATATAAGCTGATCATATGCATGC 57.171 34.615 11.82 11.82 31.73 4.06
4654 5845 3.728267 CTCCATGCATGCACGCACG 62.728 63.158 25.37 0.00 46.56 5.34
4655 5846 2.101575 CTCCATGCATGCACGCAC 59.898 61.111 25.37 0.00 46.56 5.34
4801 6007 6.135290 TGAAAATCCATACTTACATGCAGC 57.865 37.500 0.00 0.00 0.00 5.25
4873 6080 6.306199 ACATGGCAGGAAATAGTAATGCATA 58.694 36.000 5.99 0.00 38.63 3.14
4876 6083 5.067674 TCAACATGGCAGGAAATAGTAATGC 59.932 40.000 5.99 0.00 36.16 3.56
4878 6085 6.891908 AGTTCAACATGGCAGGAAATAGTAAT 59.108 34.615 5.99 0.00 0.00 1.89
4879 6086 6.150976 CAGTTCAACATGGCAGGAAATAGTAA 59.849 38.462 5.99 0.00 0.00 2.24
4881 6088 4.460382 CAGTTCAACATGGCAGGAAATAGT 59.540 41.667 5.99 0.00 0.00 2.12
4882 6089 4.460382 ACAGTTCAACATGGCAGGAAATAG 59.540 41.667 5.99 0.00 0.00 1.73
4884 6091 3.233507 ACAGTTCAACATGGCAGGAAAT 58.766 40.909 5.99 0.00 0.00 2.17
4885 6092 2.622942 GACAGTTCAACATGGCAGGAAA 59.377 45.455 5.99 0.00 0.00 3.13
4886 6093 2.158623 AGACAGTTCAACATGGCAGGAA 60.159 45.455 5.99 0.00 0.00 3.36
4892 6111 2.815503 TGATGCAGACAGTTCAACATGG 59.184 45.455 0.00 0.00 0.00 3.66
4919 6138 9.690913 AAGATCAGACCTAAAATTCATGATTGA 57.309 29.630 0.00 0.00 0.00 2.57
4965 6188 3.713248 TGAGATGCTGGGACTTGTCATAT 59.287 43.478 3.08 0.00 0.00 1.78
5053 6295 2.896745 TGATCTCATGCGTGCACTAT 57.103 45.000 16.19 6.46 0.00 2.12
5096 6341 1.068287 GCACGAGTCAGCGAGAAGAC 61.068 60.000 0.00 0.00 35.02 3.01
5104 6349 2.049985 ACTCACGCACGAGTCAGC 60.050 61.111 0.00 0.00 42.70 4.26
5141 6386 8.912988 AGATAATGCAGAGGAGCTAGATAATAC 58.087 37.037 0.00 0.00 34.99 1.89
5142 6387 9.130661 GAGATAATGCAGAGGAGCTAGATAATA 57.869 37.037 0.00 0.00 34.99 0.98
5143 6388 7.618907 TGAGATAATGCAGAGGAGCTAGATAAT 59.381 37.037 0.00 0.00 34.99 1.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.