Multiple sequence alignment - TraesCS5B01G011800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G011800 | chr5B | 100.000 | 7529 | 0 | 0 | 1 | 7529 | 11557238 | 11549710 | 0.000000e+00 | 13904.0 |
1 | TraesCS5B01G011800 | chr5B | 93.656 | 1592 | 57 | 18 | 2651 | 4224 | 613158781 | 613160346 | 0.000000e+00 | 2340.0 |
2 | TraesCS5B01G011800 | chr5B | 89.888 | 1780 | 110 | 22 | 4837 | 6560 | 11515416 | 11517181 | 0.000000e+00 | 2226.0 |
3 | TraesCS5B01G011800 | chr5B | 90.517 | 1392 | 116 | 13 | 2651 | 4036 | 687972101 | 687973482 | 0.000000e+00 | 1825.0 |
4 | TraesCS5B01G011800 | chr5B | 91.139 | 1185 | 75 | 16 | 2615 | 3782 | 387983551 | 387984722 | 0.000000e+00 | 1580.0 |
5 | TraesCS5B01G011800 | chr5B | 94.652 | 617 | 20 | 7 | 4223 | 4838 | 613160447 | 613161051 | 0.000000e+00 | 944.0 |
6 | TraesCS5B01G011800 | chr5B | 82.234 | 940 | 128 | 26 | 256 | 1183 | 11512745 | 11513657 | 0.000000e+00 | 774.0 |
7 | TraesCS5B01G011800 | chr5B | 87.601 | 621 | 47 | 8 | 2002 | 2600 | 11514802 | 11515414 | 0.000000e+00 | 693.0 |
8 | TraesCS5B01G011800 | chr5B | 94.444 | 432 | 21 | 3 | 4223 | 4653 | 687973849 | 687974278 | 0.000000e+00 | 662.0 |
9 | TraesCS5B01G011800 | chr5B | 92.365 | 406 | 15 | 11 | 4444 | 4838 | 229364186 | 229363786 | 1.420000e-156 | 564.0 |
10 | TraesCS5B01G011800 | chr5B | 80.699 | 601 | 89 | 19 | 6941 | 7527 | 11517382 | 11517969 | 6.930000e-120 | 442.0 |
11 | TraesCS5B01G011800 | chr5B | 96.757 | 185 | 5 | 1 | 4041 | 4224 | 687973564 | 687973748 | 2.640000e-79 | 307.0 |
12 | TraesCS5B01G011800 | chr5B | 81.375 | 349 | 26 | 11 | 1404 | 1737 | 11514071 | 11514395 | 1.620000e-61 | 248.0 |
13 | TraesCS5B01G011800 | chr5B | 98.425 | 127 | 2 | 0 | 6768 | 6894 | 354511659 | 354511533 | 2.730000e-54 | 224.0 |
14 | TraesCS5B01G011800 | chr5B | 95.620 | 137 | 5 | 1 | 6766 | 6901 | 482199754 | 482199618 | 1.270000e-52 | 219.0 |
15 | TraesCS5B01G011800 | chr5B | 94.891 | 137 | 7 | 0 | 6758 | 6894 | 384570618 | 384570482 | 1.650000e-51 | 215.0 |
16 | TraesCS5B01G011800 | chr5B | 92.857 | 140 | 8 | 2 | 6632 | 6770 | 11517180 | 11517318 | 1.280000e-47 | 202.0 |
17 | TraesCS5B01G011800 | chr3B | 94.556 | 2241 | 58 | 38 | 2609 | 4838 | 4767972 | 4765785 | 0.000000e+00 | 3404.0 |
18 | TraesCS5B01G011800 | chr3B | 95.732 | 1031 | 36 | 6 | 2609 | 3632 | 788208169 | 788209198 | 0.000000e+00 | 1653.0 |
19 | TraesCS5B01G011800 | chr3B | 90.962 | 1029 | 84 | 7 | 2651 | 3672 | 702831247 | 702832273 | 0.000000e+00 | 1376.0 |
20 | TraesCS5B01G011800 | chr3B | 94.964 | 139 | 7 | 0 | 6761 | 6899 | 593869156 | 593869294 | 1.270000e-52 | 219.0 |
21 | TraesCS5B01G011800 | chr5D | 91.385 | 1985 | 92 | 23 | 4839 | 6767 | 11433590 | 11435551 | 0.000000e+00 | 2645.0 |
22 | TraesCS5B01G011800 | chr5D | 93.289 | 1505 | 87 | 10 | 243 | 1743 | 11431078 | 11432572 | 0.000000e+00 | 2207.0 |
23 | TraesCS5B01G011800 | chr5D | 88.430 | 1815 | 113 | 29 | 4837 | 6566 | 11531236 | 11529434 | 0.000000e+00 | 2098.0 |
24 | TraesCS5B01G011800 | chr5D | 90.878 | 866 | 50 | 12 | 1751 | 2609 | 11432752 | 11433595 | 0.000000e+00 | 1134.0 |
25 | TraesCS5B01G011800 | chr5D | 83.134 | 919 | 122 | 20 | 302 | 1203 | 11533896 | 11532994 | 0.000000e+00 | 808.0 |
26 | TraesCS5B01G011800 | chr5D | 88.782 | 624 | 46 | 10 | 2002 | 2609 | 11531844 | 11531229 | 0.000000e+00 | 743.0 |
27 | TraesCS5B01G011800 | chr5D | 94.587 | 351 | 13 | 1 | 6894 | 7238 | 11435553 | 11435903 | 8.600000e-149 | 538.0 |
28 | TraesCS5B01G011800 | chr5D | 84.713 | 314 | 17 | 13 | 1431 | 1737 | 11532546 | 11532257 | 1.240000e-72 | 285.0 |
29 | TraesCS5B01G011800 | chr5D | 93.571 | 140 | 7 | 2 | 6632 | 6770 | 11529441 | 11529303 | 2.750000e-49 | 207.0 |
30 | TraesCS5B01G011800 | chr5D | 85.057 | 87 | 11 | 2 | 7443 | 7527 | 11465296 | 11465210 | 3.740000e-13 | 87.9 |
31 | TraesCS5B01G011800 | chr1A | 90.781 | 1985 | 104 | 30 | 4837 | 6769 | 99658152 | 99660109 | 0.000000e+00 | 2579.0 |
32 | TraesCS5B01G011800 | chr1A | 89.933 | 1788 | 107 | 22 | 4838 | 6566 | 99699865 | 99698092 | 0.000000e+00 | 2237.0 |
33 | TraesCS5B01G011800 | chr1A | 86.032 | 1797 | 172 | 40 | 5013 | 6758 | 297746713 | 297744945 | 0.000000e+00 | 1855.0 |
34 | TraesCS5B01G011800 | chr1A | 92.138 | 1132 | 76 | 11 | 618 | 1743 | 99621417 | 99622541 | 0.000000e+00 | 1585.0 |
35 | TraesCS5B01G011800 | chr1A | 94.919 | 984 | 39 | 7 | 2651 | 3631 | 521906918 | 521905943 | 0.000000e+00 | 1530.0 |
36 | TraesCS5B01G011800 | chr1A | 90.237 | 1096 | 83 | 15 | 2608 | 3686 | 586378928 | 586377840 | 0.000000e+00 | 1410.0 |
37 | TraesCS5B01G011800 | chr1A | 96.844 | 507 | 14 | 1 | 2094 | 2600 | 99657646 | 99658150 | 0.000000e+00 | 846.0 |
38 | TraesCS5B01G011800 | chr1A | 88.084 | 621 | 55 | 6 | 2002 | 2609 | 99700473 | 99699859 | 0.000000e+00 | 719.0 |
39 | TraesCS5B01G011800 | chr1A | 93.590 | 390 | 15 | 2 | 6893 | 7276 | 99660108 | 99660493 | 2.360000e-159 | 573.0 |
40 | TraesCS5B01G011800 | chr1A | 82.816 | 483 | 52 | 18 | 1847 | 2308 | 297747727 | 297747255 | 3.270000e-108 | 403.0 |
41 | TraesCS5B01G011800 | chr1A | 84.573 | 363 | 42 | 13 | 4480 | 4838 | 561216437 | 561216789 | 1.550000e-91 | 348.0 |
42 | TraesCS5B01G011800 | chr1A | 88.889 | 261 | 25 | 2 | 2342 | 2600 | 297747184 | 297746926 | 1.220000e-82 | 318.0 |
43 | TraesCS5B01G011800 | chr1A | 82.997 | 347 | 23 | 8 | 1404 | 1737 | 99701203 | 99700880 | 1.600000e-71 | 281.0 |
44 | TraesCS5B01G011800 | chr1A | 87.917 | 240 | 20 | 6 | 462 | 699 | 99703159 | 99702927 | 2.680000e-69 | 274.0 |
45 | TraesCS5B01G011800 | chr1A | 86.175 | 217 | 18 | 7 | 1528 | 1739 | 297749428 | 297749219 | 2.730000e-54 | 224.0 |
46 | TraesCS5B01G011800 | chr1A | 89.655 | 174 | 12 | 3 | 528 | 699 | 99702918 | 99702749 | 4.570000e-52 | 217.0 |
47 | TraesCS5B01G011800 | chr1A | 80.583 | 206 | 24 | 10 | 4818 | 5015 | 297746940 | 297746743 | 2.190000e-30 | 145.0 |
48 | TraesCS5B01G011800 | chr3A | 92.511 | 1629 | 70 | 23 | 2616 | 4224 | 11619872 | 11618276 | 0.000000e+00 | 2285.0 |
49 | TraesCS5B01G011800 | chr3A | 91.290 | 620 | 23 | 13 | 4223 | 4838 | 11618175 | 11617583 | 0.000000e+00 | 817.0 |
50 | TraesCS5B01G011800 | chr3A | 97.710 | 131 | 3 | 0 | 6767 | 6897 | 596769555 | 596769685 | 7.600000e-55 | 226.0 |
51 | TraesCS5B01G011800 | chr7B | 92.431 | 1625 | 76 | 21 | 2616 | 4223 | 538211160 | 538209566 | 0.000000e+00 | 2276.0 |
52 | TraesCS5B01G011800 | chr7B | 92.581 | 620 | 30 | 13 | 4223 | 4838 | 538209464 | 538208857 | 0.000000e+00 | 876.0 |
53 | TraesCS5B01G011800 | chr7B | 81.951 | 410 | 50 | 16 | 4444 | 4838 | 734292741 | 734293141 | 7.290000e-85 | 326.0 |
54 | TraesCS5B01G011800 | chr7B | 84.762 | 315 | 31 | 13 | 4531 | 4836 | 484625022 | 484625328 | 4.420000e-77 | 300.0 |
55 | TraesCS5B01G011800 | chr7B | 95.489 | 133 | 6 | 0 | 6763 | 6895 | 332242893 | 332242761 | 5.920000e-51 | 213.0 |
56 | TraesCS5B01G011800 | chr1B | 86.523 | 1996 | 184 | 42 | 4837 | 6770 | 328822548 | 328820576 | 0.000000e+00 | 2117.0 |
57 | TraesCS5B01G011800 | chr1B | 96.026 | 1208 | 18 | 13 | 3598 | 4801 | 631892981 | 631894162 | 0.000000e+00 | 1938.0 |
58 | TraesCS5B01G011800 | chr1B | 94.411 | 984 | 44 | 7 | 2651 | 3631 | 494066849 | 494067824 | 0.000000e+00 | 1502.0 |
59 | TraesCS5B01G011800 | chr1B | 83.791 | 401 | 51 | 8 | 1846 | 2238 | 328823246 | 328822852 | 1.190000e-97 | 368.0 |
60 | TraesCS5B01G011800 | chr1B | 88.519 | 270 | 27 | 2 | 2342 | 2609 | 328822808 | 328822541 | 2.620000e-84 | 324.0 |
61 | TraesCS5B01G011800 | chr1B | 83.482 | 224 | 27 | 6 | 1528 | 1743 | 328824859 | 328824638 | 4.610000e-47 | 200.0 |
62 | TraesCS5B01G011800 | chr2A | 95.944 | 1208 | 19 | 13 | 3598 | 4801 | 584582840 | 584584021 | 0.000000e+00 | 1932.0 |
63 | TraesCS5B01G011800 | chr2A | 82.084 | 787 | 86 | 39 | 4089 | 4854 | 710656306 | 710655554 | 8.300000e-174 | 621.0 |
64 | TraesCS5B01G011800 | chr2A | 96.241 | 133 | 5 | 0 | 6762 | 6894 | 172348840 | 172348708 | 1.270000e-52 | 219.0 |
65 | TraesCS5B01G011800 | chr1D | 86.038 | 1812 | 175 | 35 | 5013 | 6770 | 229485307 | 229483520 | 0.000000e+00 | 1873.0 |
66 | TraesCS5B01G011800 | chr1D | 79.879 | 497 | 56 | 23 | 1845 | 2308 | 229486333 | 229485848 | 2.620000e-84 | 324.0 |
67 | TraesCS5B01G011800 | chr1D | 88.123 | 261 | 26 | 3 | 2342 | 2600 | 229485777 | 229485520 | 9.490000e-79 | 305.0 |
68 | TraesCS5B01G011800 | chr1D | 84.722 | 216 | 23 | 5 | 1528 | 1743 | 229487941 | 229487736 | 2.750000e-49 | 207.0 |
69 | TraesCS5B01G011800 | chr1D | 78.261 | 322 | 28 | 22 | 1217 | 1508 | 229488655 | 229488346 | 1.300000e-37 | 169.0 |
70 | TraesCS5B01G011800 | chr1D | 83.152 | 184 | 18 | 7 | 4840 | 5015 | 229485515 | 229485337 | 1.010000e-33 | 156.0 |
71 | TraesCS5B01G011800 | chr5A | 95.926 | 1031 | 34 | 6 | 2609 | 3632 | 620407499 | 620408528 | 0.000000e+00 | 1664.0 |
72 | TraesCS5B01G011800 | chr5A | 92.118 | 406 | 16 | 12 | 4444 | 4838 | 620409363 | 620409763 | 6.600000e-155 | 558.0 |
73 | TraesCS5B01G011800 | chr6B | 87.953 | 1187 | 99 | 27 | 2609 | 3782 | 702663083 | 702664238 | 0.000000e+00 | 1360.0 |
74 | TraesCS5B01G011800 | chr6A | 89.214 | 1094 | 86 | 24 | 2607 | 3683 | 188252209 | 188253287 | 0.000000e+00 | 1338.0 |
75 | TraesCS5B01G011800 | chr2B | 81.530 | 758 | 94 | 33 | 4096 | 4838 | 246111678 | 246110952 | 3.920000e-162 | 582.0 |
76 | TraesCS5B01G011800 | chr2B | 94.444 | 144 | 5 | 3 | 6756 | 6898 | 547432039 | 547431898 | 1.270000e-52 | 219.0 |
77 | TraesCS5B01G011800 | chrUn | 84.984 | 313 | 32 | 7 | 4531 | 4838 | 314376694 | 314376392 | 3.410000e-78 | 303.0 |
78 | TraesCS5B01G011800 | chr3D | 96.899 | 129 | 4 | 0 | 6767 | 6895 | 67064912 | 67064784 | 4.570000e-52 | 217.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G011800 | chr5B | 11549710 | 11557238 | 7528 | True | 13904.000000 | 13904 | 100.000000 | 1 | 7529 | 1 | chr5B.!!$R1 | 7528 |
1 | TraesCS5B01G011800 | chr5B | 613158781 | 613161051 | 2270 | False | 1642.000000 | 2340 | 94.154000 | 2651 | 4838 | 2 | chr5B.!!$F3 | 2187 |
2 | TraesCS5B01G011800 | chr5B | 387983551 | 387984722 | 1171 | False | 1580.000000 | 1580 | 91.139000 | 2615 | 3782 | 1 | chr5B.!!$F1 | 1167 |
3 | TraesCS5B01G011800 | chr5B | 687972101 | 687974278 | 2177 | False | 931.333333 | 1825 | 93.906000 | 2651 | 4653 | 3 | chr5B.!!$F4 | 2002 |
4 | TraesCS5B01G011800 | chr5B | 11512745 | 11517969 | 5224 | False | 764.166667 | 2226 | 85.775667 | 256 | 7527 | 6 | chr5B.!!$F2 | 7271 |
5 | TraesCS5B01G011800 | chr3B | 4765785 | 4767972 | 2187 | True | 3404.000000 | 3404 | 94.556000 | 2609 | 4838 | 1 | chr3B.!!$R1 | 2229 |
6 | TraesCS5B01G011800 | chr3B | 788208169 | 788209198 | 1029 | False | 1653.000000 | 1653 | 95.732000 | 2609 | 3632 | 1 | chr3B.!!$F3 | 1023 |
7 | TraesCS5B01G011800 | chr3B | 702831247 | 702832273 | 1026 | False | 1376.000000 | 1376 | 90.962000 | 2651 | 3672 | 1 | chr3B.!!$F2 | 1021 |
8 | TraesCS5B01G011800 | chr5D | 11431078 | 11435903 | 4825 | False | 1631.000000 | 2645 | 92.534750 | 243 | 7238 | 4 | chr5D.!!$F1 | 6995 |
9 | TraesCS5B01G011800 | chr5D | 11529303 | 11533896 | 4593 | True | 828.200000 | 2098 | 87.726000 | 302 | 6770 | 5 | chr5D.!!$R2 | 6468 |
10 | TraesCS5B01G011800 | chr1A | 99621417 | 99622541 | 1124 | False | 1585.000000 | 1585 | 92.138000 | 618 | 1743 | 1 | chr1A.!!$F1 | 1125 |
11 | TraesCS5B01G011800 | chr1A | 521905943 | 521906918 | 975 | True | 1530.000000 | 1530 | 94.919000 | 2651 | 3631 | 1 | chr1A.!!$R1 | 980 |
12 | TraesCS5B01G011800 | chr1A | 586377840 | 586378928 | 1088 | True | 1410.000000 | 1410 | 90.237000 | 2608 | 3686 | 1 | chr1A.!!$R2 | 1078 |
13 | TraesCS5B01G011800 | chr1A | 99657646 | 99660493 | 2847 | False | 1332.666667 | 2579 | 93.738333 | 2094 | 7276 | 3 | chr1A.!!$F3 | 5182 |
14 | TraesCS5B01G011800 | chr1A | 99698092 | 99703159 | 5067 | True | 745.600000 | 2237 | 87.717200 | 462 | 6566 | 5 | chr1A.!!$R3 | 6104 |
15 | TraesCS5B01G011800 | chr1A | 297744945 | 297749428 | 4483 | True | 589.000000 | 1855 | 84.899000 | 1528 | 6758 | 5 | chr1A.!!$R4 | 5230 |
16 | TraesCS5B01G011800 | chr3A | 11617583 | 11619872 | 2289 | True | 1551.000000 | 2285 | 91.900500 | 2616 | 4838 | 2 | chr3A.!!$R1 | 2222 |
17 | TraesCS5B01G011800 | chr7B | 538208857 | 538211160 | 2303 | True | 1576.000000 | 2276 | 92.506000 | 2616 | 4838 | 2 | chr7B.!!$R2 | 2222 |
18 | TraesCS5B01G011800 | chr1B | 631892981 | 631894162 | 1181 | False | 1938.000000 | 1938 | 96.026000 | 3598 | 4801 | 1 | chr1B.!!$F2 | 1203 |
19 | TraesCS5B01G011800 | chr1B | 494066849 | 494067824 | 975 | False | 1502.000000 | 1502 | 94.411000 | 2651 | 3631 | 1 | chr1B.!!$F1 | 980 |
20 | TraesCS5B01G011800 | chr1B | 328820576 | 328824859 | 4283 | True | 752.250000 | 2117 | 85.578750 | 1528 | 6770 | 4 | chr1B.!!$R1 | 5242 |
21 | TraesCS5B01G011800 | chr2A | 584582840 | 584584021 | 1181 | False | 1932.000000 | 1932 | 95.944000 | 3598 | 4801 | 1 | chr2A.!!$F1 | 1203 |
22 | TraesCS5B01G011800 | chr2A | 710655554 | 710656306 | 752 | True | 621.000000 | 621 | 82.084000 | 4089 | 4854 | 1 | chr2A.!!$R2 | 765 |
23 | TraesCS5B01G011800 | chr1D | 229483520 | 229488655 | 5135 | True | 505.666667 | 1873 | 83.362500 | 1217 | 6770 | 6 | chr1D.!!$R1 | 5553 |
24 | TraesCS5B01G011800 | chr5A | 620407499 | 620409763 | 2264 | False | 1111.000000 | 1664 | 94.022000 | 2609 | 4838 | 2 | chr5A.!!$F1 | 2229 |
25 | TraesCS5B01G011800 | chr6B | 702663083 | 702664238 | 1155 | False | 1360.000000 | 1360 | 87.953000 | 2609 | 3782 | 1 | chr6B.!!$F1 | 1173 |
26 | TraesCS5B01G011800 | chr6A | 188252209 | 188253287 | 1078 | False | 1338.000000 | 1338 | 89.214000 | 2607 | 3683 | 1 | chr6A.!!$F1 | 1076 |
27 | TraesCS5B01G011800 | chr2B | 246110952 | 246111678 | 726 | True | 582.000000 | 582 | 81.530000 | 4096 | 4838 | 1 | chr2B.!!$R1 | 742 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
103 | 104 | 0.033504 | GAGTGAACCACCTCGCTTGA | 59.966 | 55.0 | 0.00 | 0.0 | 36.31 | 3.02 | F |
226 | 227 | 0.035739 | GGACGCAGGGGTTTTAGTGA | 59.964 | 55.0 | 0.00 | 0.0 | 0.00 | 3.41 | F |
454 | 457 | 0.037303 | CAGCCTGGCCTCTTTTCTCA | 59.963 | 55.0 | 16.57 | 0.0 | 0.00 | 3.27 | F |
986 | 1792 | 0.392193 | CTCAGCACCGGAAAGCAGAT | 60.392 | 55.0 | 9.46 | 0.0 | 0.00 | 2.90 | F |
1829 | 4066 | 0.472925 | TGCTGACCCAGGGACAACTA | 60.473 | 55.0 | 14.54 | 0.0 | 31.21 | 2.24 | F |
3046 | 6510 | 0.310543 | TGTTGCCGATGAGTTGTTGC | 59.689 | 50.0 | 0.00 | 0.0 | 0.00 | 4.17 | F |
4003 | 7833 | 0.248498 | CTTTGCTCGGCGTAGATCGA | 60.248 | 55.0 | 6.85 | 0.0 | 42.86 | 3.59 | F |
5510 | 9976 | 0.469705 | ACAGGTGCTGCCCAATTGAA | 60.470 | 50.0 | 7.12 | 0.0 | 38.26 | 2.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1084 | 1900 | 0.179004 | TCGCCCAATGTTGTGTTCCT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 | R |
1746 | 3355 | 0.527565 | TTACAGGGTAGCGTTCGGTC | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 | R |
1802 | 3850 | 1.153489 | CTGGGTCAGCATCACCGAG | 60.153 | 63.158 | 0.00 | 0.00 | 33.92 | 4.63 | R |
2488 | 5927 | 2.042686 | AATCTGCAAGCGCCTTGATA | 57.957 | 45.000 | 19.38 | 9.17 | 43.42 | 2.15 | R |
3180 | 6665 | 1.217511 | CGTCCACATCTGCAGCTCT | 59.782 | 57.895 | 9.47 | 0.00 | 0.00 | 4.09 | R |
4094 | 8001 | 0.036388 | CCAGGTACGTCCATGCACTT | 60.036 | 55.000 | 0.00 | 0.00 | 39.02 | 3.16 | R |
5862 | 10401 | 0.313672 | GTTGCGGTGAGGAAATGCAA | 59.686 | 50.000 | 0.00 | 0.00 | 42.68 | 4.08 | R |
7357 | 11941 | 0.030195 | TGACTGGCCCCCTCATCATA | 60.030 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 3.912496 | TGGATGATCATGTCCGTTTCT | 57.088 | 42.857 | 14.30 | 0.00 | 37.32 | 2.52 |
22 | 23 | 4.220693 | TGGATGATCATGTCCGTTTCTT | 57.779 | 40.909 | 14.30 | 0.00 | 37.32 | 2.52 |
23 | 24 | 4.191544 | TGGATGATCATGTCCGTTTCTTC | 58.808 | 43.478 | 14.30 | 0.00 | 37.32 | 2.87 |
24 | 25 | 3.246226 | GGATGATCATGTCCGTTTCTTCG | 59.754 | 47.826 | 14.30 | 0.00 | 0.00 | 3.79 |
25 | 26 | 3.313012 | TGATCATGTCCGTTTCTTCGT | 57.687 | 42.857 | 0.00 | 0.00 | 0.00 | 3.85 |
26 | 27 | 2.993220 | TGATCATGTCCGTTTCTTCGTG | 59.007 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
27 | 28 | 2.519377 | TCATGTCCGTTTCTTCGTGT | 57.481 | 45.000 | 0.00 | 0.00 | 0.00 | 4.49 |
28 | 29 | 2.828877 | TCATGTCCGTTTCTTCGTGTT | 58.171 | 42.857 | 0.00 | 0.00 | 0.00 | 3.32 |
29 | 30 | 2.542178 | TCATGTCCGTTTCTTCGTGTTG | 59.458 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
30 | 31 | 0.653636 | TGTCCGTTTCTTCGTGTTGC | 59.346 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
31 | 32 | 0.653636 | GTCCGTTTCTTCGTGTTGCA | 59.346 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
32 | 33 | 0.934496 | TCCGTTTCTTCGTGTTGCAG | 59.066 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
33 | 34 | 0.934496 | CCGTTTCTTCGTGTTGCAGA | 59.066 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
34 | 35 | 1.531149 | CCGTTTCTTCGTGTTGCAGAT | 59.469 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
35 | 36 | 2.563976 | CGTTTCTTCGTGTTGCAGATG | 58.436 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
36 | 37 | 2.310577 | GTTTCTTCGTGTTGCAGATGC | 58.689 | 47.619 | 0.00 | 0.00 | 42.50 | 3.91 |
37 | 38 | 0.512518 | TTCTTCGTGTTGCAGATGCG | 59.487 | 50.000 | 0.00 | 0.00 | 45.83 | 4.73 |
38 | 39 | 1.133253 | CTTCGTGTTGCAGATGCGG | 59.867 | 57.895 | 0.00 | 0.00 | 45.83 | 5.69 |
39 | 40 | 1.291184 | CTTCGTGTTGCAGATGCGGA | 61.291 | 55.000 | 0.00 | 0.00 | 45.83 | 5.54 |
40 | 41 | 0.673333 | TTCGTGTTGCAGATGCGGAT | 60.673 | 50.000 | 0.00 | 0.00 | 45.83 | 4.18 |
41 | 42 | 1.061411 | CGTGTTGCAGATGCGGATG | 59.939 | 57.895 | 0.00 | 0.00 | 45.83 | 3.51 |
42 | 43 | 1.430632 | GTGTTGCAGATGCGGATGG | 59.569 | 57.895 | 0.00 | 0.00 | 45.83 | 3.51 |
43 | 44 | 1.750018 | TGTTGCAGATGCGGATGGG | 60.750 | 57.895 | 0.00 | 0.00 | 45.83 | 4.00 |
44 | 45 | 1.750399 | GTTGCAGATGCGGATGGGT | 60.750 | 57.895 | 0.00 | 0.00 | 45.83 | 4.51 |
45 | 46 | 1.001020 | TTGCAGATGCGGATGGGTT | 60.001 | 52.632 | 0.00 | 0.00 | 45.83 | 4.11 |
46 | 47 | 0.254462 | TTGCAGATGCGGATGGGTTA | 59.746 | 50.000 | 0.00 | 0.00 | 45.83 | 2.85 |
47 | 48 | 0.473755 | TGCAGATGCGGATGGGTTAT | 59.526 | 50.000 | 0.00 | 0.00 | 45.83 | 1.89 |
48 | 49 | 1.133823 | TGCAGATGCGGATGGGTTATT | 60.134 | 47.619 | 0.00 | 0.00 | 45.83 | 1.40 |
49 | 50 | 1.956477 | GCAGATGCGGATGGGTTATTT | 59.044 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
50 | 51 | 2.362077 | GCAGATGCGGATGGGTTATTTT | 59.638 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
51 | 52 | 3.796504 | GCAGATGCGGATGGGTTATTTTG | 60.797 | 47.826 | 0.00 | 0.00 | 0.00 | 2.44 |
52 | 53 | 2.958355 | AGATGCGGATGGGTTATTTTGG | 59.042 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
53 | 54 | 1.479709 | TGCGGATGGGTTATTTTGGG | 58.520 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
54 | 55 | 1.006043 | TGCGGATGGGTTATTTTGGGA | 59.994 | 47.619 | 0.00 | 0.00 | 0.00 | 4.37 |
55 | 56 | 1.407618 | GCGGATGGGTTATTTTGGGAC | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
56 | 57 | 1.673920 | CGGATGGGTTATTTTGGGACG | 59.326 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
57 | 58 | 1.407618 | GGATGGGTTATTTTGGGACGC | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
58 | 59 | 2.375146 | GATGGGTTATTTTGGGACGCT | 58.625 | 47.619 | 0.00 | 0.00 | 0.00 | 5.07 |
59 | 60 | 2.296073 | TGGGTTATTTTGGGACGCTT | 57.704 | 45.000 | 0.00 | 0.00 | 0.00 | 4.68 |
60 | 61 | 2.599677 | TGGGTTATTTTGGGACGCTTT | 58.400 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
61 | 62 | 2.559231 | TGGGTTATTTTGGGACGCTTTC | 59.441 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
62 | 63 | 2.823747 | GGGTTATTTTGGGACGCTTTCT | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
63 | 64 | 3.366985 | GGGTTATTTTGGGACGCTTTCTG | 60.367 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
64 | 65 | 3.242518 | GTTATTTTGGGACGCTTTCTGC | 58.757 | 45.455 | 0.00 | 0.00 | 38.57 | 4.26 |
65 | 66 | 0.603065 | ATTTTGGGACGCTTTCTGCC | 59.397 | 50.000 | 0.00 | 0.00 | 38.78 | 4.85 |
66 | 67 | 1.791103 | TTTTGGGACGCTTTCTGCCG | 61.791 | 55.000 | 0.00 | 0.00 | 38.78 | 5.69 |
67 | 68 | 4.697756 | TGGGACGCTTTCTGCCGG | 62.698 | 66.667 | 0.00 | 0.00 | 38.78 | 6.13 |
81 | 82 | 2.839629 | GCCGGGGCAAAAATTCTTG | 58.160 | 52.632 | 2.18 | 0.00 | 41.49 | 3.02 |
89 | 90 | 3.011949 | GCAAAAATTCTTGCCGAGTGA | 57.988 | 42.857 | 5.11 | 0.00 | 44.88 | 3.41 |
90 | 91 | 3.380142 | GCAAAAATTCTTGCCGAGTGAA | 58.620 | 40.909 | 5.11 | 0.00 | 44.88 | 3.18 |
91 | 92 | 3.182372 | GCAAAAATTCTTGCCGAGTGAAC | 59.818 | 43.478 | 5.11 | 0.00 | 44.88 | 3.18 |
92 | 93 | 3.643159 | AAAATTCTTGCCGAGTGAACC | 57.357 | 42.857 | 0.00 | 0.00 | 0.00 | 3.62 |
93 | 94 | 2.270352 | AATTCTTGCCGAGTGAACCA | 57.730 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
94 | 95 | 1.523758 | ATTCTTGCCGAGTGAACCAC | 58.476 | 50.000 | 0.00 | 0.00 | 34.10 | 4.16 |
95 | 96 | 0.534203 | TTCTTGCCGAGTGAACCACC | 60.534 | 55.000 | 0.00 | 0.00 | 34.49 | 4.61 |
96 | 97 | 1.071471 | CTTGCCGAGTGAACCACCT | 59.929 | 57.895 | 0.00 | 0.00 | 34.49 | 4.00 |
97 | 98 | 0.951040 | CTTGCCGAGTGAACCACCTC | 60.951 | 60.000 | 0.00 | 0.00 | 34.49 | 3.85 |
98 | 99 | 2.432628 | GCCGAGTGAACCACCTCG | 60.433 | 66.667 | 0.00 | 0.00 | 36.02 | 4.63 |
99 | 100 | 2.432628 | CCGAGTGAACCACCTCGC | 60.433 | 66.667 | 3.67 | 0.00 | 35.45 | 5.03 |
100 | 101 | 2.651361 | CGAGTGAACCACCTCGCT | 59.349 | 61.111 | 0.00 | 0.00 | 38.88 | 4.93 |
101 | 102 | 1.006102 | CGAGTGAACCACCTCGCTT | 60.006 | 57.895 | 0.00 | 0.00 | 36.31 | 4.68 |
102 | 103 | 1.284982 | CGAGTGAACCACCTCGCTTG | 61.285 | 60.000 | 0.00 | 0.00 | 36.31 | 4.01 |
103 | 104 | 0.033504 | GAGTGAACCACCTCGCTTGA | 59.966 | 55.000 | 0.00 | 0.00 | 36.31 | 3.02 |
104 | 105 | 0.249911 | AGTGAACCACCTCGCTTGAC | 60.250 | 55.000 | 0.00 | 0.00 | 32.14 | 3.18 |
105 | 106 | 0.531974 | GTGAACCACCTCGCTTGACA | 60.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
106 | 107 | 0.531974 | TGAACCACCTCGCTTGACAC | 60.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
107 | 108 | 1.227853 | AACCACCTCGCTTGACACC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.16 |
108 | 109 | 1.696097 | AACCACCTCGCTTGACACCT | 61.696 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
109 | 110 | 1.071471 | CCACCTCGCTTGACACCTT | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 3.50 |
110 | 111 | 0.951040 | CCACCTCGCTTGACACCTTC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
111 | 112 | 0.951040 | CACCTCGCTTGACACCTTCC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
112 | 113 | 1.376037 | CCTCGCTTGACACCTTCCC | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 3.97 |
113 | 114 | 1.674057 | CTCGCTTGACACCTTCCCT | 59.326 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
114 | 115 | 0.895530 | CTCGCTTGACACCTTCCCTA | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
115 | 116 | 1.275291 | CTCGCTTGACACCTTCCCTAA | 59.725 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
116 | 117 | 1.695242 | TCGCTTGACACCTTCCCTAAA | 59.305 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
117 | 118 | 2.304761 | TCGCTTGACACCTTCCCTAAAT | 59.695 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
118 | 119 | 2.420022 | CGCTTGACACCTTCCCTAAATG | 59.580 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
119 | 120 | 2.755103 | GCTTGACACCTTCCCTAAATGG | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
120 | 121 | 3.561313 | GCTTGACACCTTCCCTAAATGGA | 60.561 | 47.826 | 0.00 | 0.00 | 38.35 | 3.41 |
121 | 122 | 4.860022 | CTTGACACCTTCCCTAAATGGAT | 58.140 | 43.478 | 0.00 | 0.00 | 38.35 | 3.41 |
122 | 123 | 4.503714 | TGACACCTTCCCTAAATGGATC | 57.496 | 45.455 | 0.00 | 0.00 | 38.35 | 3.36 |
123 | 124 | 3.849574 | TGACACCTTCCCTAAATGGATCA | 59.150 | 43.478 | 0.00 | 0.00 | 38.35 | 2.92 |
124 | 125 | 4.290985 | TGACACCTTCCCTAAATGGATCAA | 59.709 | 41.667 | 0.00 | 0.00 | 38.35 | 2.57 |
125 | 126 | 5.222233 | TGACACCTTCCCTAAATGGATCAAA | 60.222 | 40.000 | 0.00 | 0.00 | 38.35 | 2.69 |
126 | 127 | 5.264395 | ACACCTTCCCTAAATGGATCAAAG | 58.736 | 41.667 | 0.00 | 0.00 | 38.35 | 2.77 |
127 | 128 | 4.646492 | CACCTTCCCTAAATGGATCAAAGG | 59.354 | 45.833 | 0.00 | 0.00 | 38.35 | 3.11 |
128 | 129 | 4.544152 | ACCTTCCCTAAATGGATCAAAGGA | 59.456 | 41.667 | 4.92 | 0.00 | 38.35 | 3.36 |
129 | 130 | 5.016245 | ACCTTCCCTAAATGGATCAAAGGAA | 59.984 | 40.000 | 4.92 | 0.00 | 38.35 | 3.36 |
130 | 131 | 5.595952 | CCTTCCCTAAATGGATCAAAGGAAG | 59.404 | 44.000 | 8.21 | 8.21 | 45.64 | 3.46 |
131 | 132 | 5.796502 | TCCCTAAATGGATCAAAGGAAGT | 57.203 | 39.130 | 0.00 | 0.00 | 38.35 | 3.01 |
132 | 133 | 5.755849 | TCCCTAAATGGATCAAAGGAAGTC | 58.244 | 41.667 | 0.00 | 0.00 | 38.35 | 3.01 |
133 | 134 | 5.252863 | TCCCTAAATGGATCAAAGGAAGTCA | 59.747 | 40.000 | 0.00 | 0.00 | 38.35 | 3.41 |
134 | 135 | 6.068853 | TCCCTAAATGGATCAAAGGAAGTCAT | 60.069 | 38.462 | 0.00 | 0.00 | 38.35 | 3.06 |
135 | 136 | 6.608808 | CCCTAAATGGATCAAAGGAAGTCATT | 59.391 | 38.462 | 0.00 | 0.00 | 38.35 | 2.57 |
136 | 137 | 7.124750 | CCCTAAATGGATCAAAGGAAGTCATTT | 59.875 | 37.037 | 0.00 | 0.00 | 38.35 | 2.32 |
137 | 138 | 9.189156 | CCTAAATGGATCAAAGGAAGTCATTTA | 57.811 | 33.333 | 0.00 | 0.00 | 38.35 | 1.40 |
139 | 140 | 6.683974 | ATGGATCAAAGGAAGTCATTTACG | 57.316 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
140 | 141 | 5.556915 | TGGATCAAAGGAAGTCATTTACGT | 58.443 | 37.500 | 0.00 | 0.00 | 0.00 | 3.57 |
141 | 142 | 6.001460 | TGGATCAAAGGAAGTCATTTACGTT | 58.999 | 36.000 | 0.00 | 0.00 | 0.00 | 3.99 |
142 | 143 | 7.162761 | TGGATCAAAGGAAGTCATTTACGTTA | 58.837 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
143 | 144 | 7.662258 | TGGATCAAAGGAAGTCATTTACGTTAA | 59.338 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
144 | 145 | 7.961283 | GGATCAAAGGAAGTCATTTACGTTAAC | 59.039 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
145 | 146 | 7.193377 | TCAAAGGAAGTCATTTACGTTAACC | 57.807 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
146 | 147 | 6.205270 | TCAAAGGAAGTCATTTACGTTAACCC | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 4.11 |
147 | 148 | 5.231702 | AGGAAGTCATTTACGTTAACCCA | 57.768 | 39.130 | 0.00 | 0.00 | 0.00 | 4.51 |
148 | 149 | 5.243207 | AGGAAGTCATTTACGTTAACCCAG | 58.757 | 41.667 | 0.00 | 0.00 | 0.00 | 4.45 |
149 | 150 | 5.012354 | AGGAAGTCATTTACGTTAACCCAGA | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
150 | 151 | 5.350640 | GGAAGTCATTTACGTTAACCCAGAG | 59.649 | 44.000 | 0.00 | 0.00 | 0.00 | 3.35 |
151 | 152 | 4.828829 | AGTCATTTACGTTAACCCAGAGG | 58.171 | 43.478 | 0.00 | 0.00 | 40.04 | 3.69 |
152 | 153 | 4.529377 | AGTCATTTACGTTAACCCAGAGGA | 59.471 | 41.667 | 0.00 | 0.00 | 36.73 | 3.71 |
153 | 154 | 5.189145 | AGTCATTTACGTTAACCCAGAGGAT | 59.811 | 40.000 | 0.00 | 0.00 | 36.73 | 3.24 |
154 | 155 | 5.522824 | GTCATTTACGTTAACCCAGAGGATC | 59.477 | 44.000 | 0.00 | 0.00 | 36.73 | 3.36 |
168 | 169 | 2.657143 | GAGGATCTTCTACGGGACTGT | 58.343 | 52.381 | 0.00 | 0.00 | 0.00 | 3.55 |
169 | 170 | 3.818180 | GAGGATCTTCTACGGGACTGTA | 58.182 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
170 | 171 | 4.400120 | GAGGATCTTCTACGGGACTGTAT | 58.600 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
171 | 172 | 4.145807 | AGGATCTTCTACGGGACTGTATG | 58.854 | 47.826 | 0.00 | 0.00 | 0.00 | 2.39 |
172 | 173 | 4.141228 | AGGATCTTCTACGGGACTGTATGA | 60.141 | 45.833 | 0.00 | 0.00 | 0.00 | 2.15 |
173 | 174 | 4.767928 | GGATCTTCTACGGGACTGTATGAT | 59.232 | 45.833 | 0.00 | 0.00 | 0.00 | 2.45 |
174 | 175 | 5.244178 | GGATCTTCTACGGGACTGTATGATT | 59.756 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
175 | 176 | 6.239345 | GGATCTTCTACGGGACTGTATGATTT | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 2.17 |
176 | 177 | 5.902681 | TCTTCTACGGGACTGTATGATTTG | 58.097 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
177 | 178 | 5.655090 | TCTTCTACGGGACTGTATGATTTGA | 59.345 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
178 | 179 | 6.323996 | TCTTCTACGGGACTGTATGATTTGAT | 59.676 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
179 | 180 | 7.504574 | TCTTCTACGGGACTGTATGATTTGATA | 59.495 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
180 | 181 | 7.776618 | TCTACGGGACTGTATGATTTGATAT | 57.223 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
181 | 182 | 7.602753 | TCTACGGGACTGTATGATTTGATATG | 58.397 | 38.462 | 0.00 | 0.00 | 0.00 | 1.78 |
182 | 183 | 6.419484 | ACGGGACTGTATGATTTGATATGA | 57.581 | 37.500 | 0.00 | 0.00 | 0.00 | 2.15 |
183 | 184 | 6.223852 | ACGGGACTGTATGATTTGATATGAC | 58.776 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
184 | 185 | 6.183360 | ACGGGACTGTATGATTTGATATGACA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
185 | 186 | 6.367149 | CGGGACTGTATGATTTGATATGACAG | 59.633 | 42.308 | 0.00 | 0.00 | 38.96 | 3.51 |
186 | 187 | 6.148480 | GGGACTGTATGATTTGATATGACAGC | 59.852 | 42.308 | 0.00 | 0.00 | 37.03 | 4.40 |
187 | 188 | 6.933521 | GGACTGTATGATTTGATATGACAGCT | 59.066 | 38.462 | 0.00 | 0.00 | 37.03 | 4.24 |
188 | 189 | 7.117523 | GGACTGTATGATTTGATATGACAGCTC | 59.882 | 40.741 | 0.00 | 0.00 | 37.03 | 4.09 |
189 | 190 | 7.733969 | ACTGTATGATTTGATATGACAGCTCT | 58.266 | 34.615 | 0.00 | 0.00 | 37.03 | 4.09 |
190 | 191 | 7.871973 | ACTGTATGATTTGATATGACAGCTCTC | 59.128 | 37.037 | 0.00 | 0.00 | 37.03 | 3.20 |
191 | 192 | 7.960262 | TGTATGATTTGATATGACAGCTCTCT | 58.040 | 34.615 | 0.00 | 0.00 | 0.00 | 3.10 |
192 | 193 | 7.871463 | TGTATGATTTGATATGACAGCTCTCTG | 59.129 | 37.037 | 0.00 | 0.00 | 45.71 | 3.35 |
193 | 194 | 5.055144 | TGATTTGATATGACAGCTCTCTGC | 58.945 | 41.667 | 0.00 | 0.00 | 44.10 | 4.26 |
194 | 195 | 3.465742 | TTGATATGACAGCTCTCTGCC | 57.534 | 47.619 | 0.00 | 0.00 | 44.10 | 4.85 |
195 | 196 | 1.339291 | TGATATGACAGCTCTCTGCCG | 59.661 | 52.381 | 0.00 | 0.00 | 44.10 | 5.69 |
196 | 197 | 0.678395 | ATATGACAGCTCTCTGCCGG | 59.322 | 55.000 | 0.00 | 0.00 | 44.10 | 6.13 |
197 | 198 | 0.395724 | TATGACAGCTCTCTGCCGGA | 60.396 | 55.000 | 5.05 | 0.00 | 44.10 | 5.14 |
198 | 199 | 1.260538 | ATGACAGCTCTCTGCCGGAA | 61.261 | 55.000 | 5.05 | 0.00 | 44.10 | 4.30 |
199 | 200 | 1.293498 | GACAGCTCTCTGCCGGAAA | 59.707 | 57.895 | 5.05 | 0.00 | 44.10 | 3.13 |
200 | 201 | 0.107945 | GACAGCTCTCTGCCGGAAAT | 60.108 | 55.000 | 5.05 | 0.00 | 44.10 | 2.17 |
201 | 202 | 0.326264 | ACAGCTCTCTGCCGGAAATT | 59.674 | 50.000 | 5.05 | 0.00 | 44.10 | 1.82 |
202 | 203 | 1.555075 | ACAGCTCTCTGCCGGAAATTA | 59.445 | 47.619 | 5.05 | 0.00 | 44.10 | 1.40 |
203 | 204 | 2.171448 | ACAGCTCTCTGCCGGAAATTAT | 59.829 | 45.455 | 5.05 | 0.00 | 44.10 | 1.28 |
204 | 205 | 2.805099 | CAGCTCTCTGCCGGAAATTATC | 59.195 | 50.000 | 5.05 | 0.00 | 44.23 | 1.75 |
205 | 206 | 1.795286 | GCTCTCTGCCGGAAATTATCG | 59.205 | 52.381 | 5.05 | 0.00 | 35.15 | 2.92 |
206 | 207 | 2.803492 | GCTCTCTGCCGGAAATTATCGT | 60.803 | 50.000 | 5.05 | 0.00 | 35.15 | 3.73 |
207 | 208 | 2.797156 | CTCTCTGCCGGAAATTATCGTG | 59.203 | 50.000 | 5.05 | 0.00 | 0.00 | 4.35 |
208 | 209 | 1.867233 | CTCTGCCGGAAATTATCGTGG | 59.133 | 52.381 | 5.05 | 0.00 | 0.00 | 4.94 |
209 | 210 | 1.483004 | TCTGCCGGAAATTATCGTGGA | 59.517 | 47.619 | 5.05 | 0.00 | 0.00 | 4.02 |
210 | 211 | 1.597663 | CTGCCGGAAATTATCGTGGAC | 59.402 | 52.381 | 5.05 | 0.00 | 0.00 | 4.02 |
211 | 212 | 0.580104 | GCCGGAAATTATCGTGGACG | 59.420 | 55.000 | 5.05 | 0.00 | 41.45 | 4.79 |
212 | 213 | 0.580104 | CCGGAAATTATCGTGGACGC | 59.420 | 55.000 | 0.00 | 0.00 | 39.60 | 5.19 |
213 | 214 | 1.282817 | CGGAAATTATCGTGGACGCA | 58.717 | 50.000 | 0.00 | 0.00 | 39.60 | 5.24 |
214 | 215 | 1.257936 | CGGAAATTATCGTGGACGCAG | 59.742 | 52.381 | 0.00 | 0.00 | 39.60 | 5.18 |
215 | 216 | 1.597663 | GGAAATTATCGTGGACGCAGG | 59.402 | 52.381 | 0.00 | 0.00 | 39.60 | 4.85 |
216 | 217 | 1.597663 | GAAATTATCGTGGACGCAGGG | 59.402 | 52.381 | 0.00 | 0.00 | 39.60 | 4.45 |
217 | 218 | 0.179056 | AATTATCGTGGACGCAGGGG | 60.179 | 55.000 | 0.00 | 0.00 | 39.60 | 4.79 |
218 | 219 | 1.335132 | ATTATCGTGGACGCAGGGGT | 61.335 | 55.000 | 0.00 | 0.00 | 39.60 | 4.95 |
219 | 220 | 1.546589 | TTATCGTGGACGCAGGGGTT | 61.547 | 55.000 | 0.00 | 0.00 | 39.60 | 4.11 |
220 | 221 | 1.546589 | TATCGTGGACGCAGGGGTTT | 61.547 | 55.000 | 0.00 | 0.00 | 39.60 | 3.27 |
221 | 222 | 2.406002 | ATCGTGGACGCAGGGGTTTT | 62.406 | 55.000 | 0.00 | 0.00 | 39.60 | 2.43 |
222 | 223 | 1.301874 | CGTGGACGCAGGGGTTTTA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 1.52 |
223 | 224 | 1.296056 | CGTGGACGCAGGGGTTTTAG | 61.296 | 60.000 | 0.00 | 0.00 | 0.00 | 1.85 |
224 | 225 | 0.250597 | GTGGACGCAGGGGTTTTAGT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
225 | 226 | 0.250553 | TGGACGCAGGGGTTTTAGTG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
226 | 227 | 0.035739 | GGACGCAGGGGTTTTAGTGA | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
227 | 228 | 1.439679 | GACGCAGGGGTTTTAGTGAG | 58.560 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
228 | 229 | 0.763035 | ACGCAGGGGTTTTAGTGAGT | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
229 | 230 | 1.156736 | CGCAGGGGTTTTAGTGAGTG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
230 | 231 | 1.270625 | CGCAGGGGTTTTAGTGAGTGA | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
231 | 232 | 2.427506 | GCAGGGGTTTTAGTGAGTGAG | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
232 | 233 | 2.427506 | CAGGGGTTTTAGTGAGTGAGC | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
233 | 234 | 1.002087 | AGGGGTTTTAGTGAGTGAGCG | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
234 | 235 | 1.001633 | GGGGTTTTAGTGAGTGAGCGA | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
235 | 236 | 2.338500 | GGGTTTTAGTGAGTGAGCGAG | 58.662 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
236 | 237 | 2.288886 | GGGTTTTAGTGAGTGAGCGAGT | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
237 | 238 | 2.731976 | GGTTTTAGTGAGTGAGCGAGTG | 59.268 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
238 | 239 | 2.724977 | TTTAGTGAGTGAGCGAGTGG | 57.275 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
239 | 240 | 0.888619 | TTAGTGAGTGAGCGAGTGGG | 59.111 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
240 | 241 | 0.965866 | TAGTGAGTGAGCGAGTGGGG | 60.966 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
241 | 242 | 2.997315 | TGAGTGAGCGAGTGGGGG | 60.997 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
244 | 245 | 2.232298 | GAGTGAGCGAGTGGGGGAAG | 62.232 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
297 | 299 | 2.751436 | CACGGATGCCTGGTTGGG | 60.751 | 66.667 | 0.00 | 0.00 | 36.00 | 4.12 |
346 | 348 | 0.883833 | CCAGCGTTGCTCCAAGATTT | 59.116 | 50.000 | 0.00 | 0.00 | 36.40 | 2.17 |
447 | 450 | 1.927527 | ATGTTCCAGCCTGGCCTCT | 60.928 | 57.895 | 16.57 | 0.00 | 37.47 | 3.69 |
454 | 457 | 0.037303 | CAGCCTGGCCTCTTTTCTCA | 59.963 | 55.000 | 16.57 | 0.00 | 0.00 | 3.27 |
464 | 467 | 7.391148 | TGGCCTCTTTTCTCATGTAATTAAC | 57.609 | 36.000 | 3.32 | 0.00 | 0.00 | 2.01 |
884 | 1690 | 3.112075 | CGCGCACGGCCCTATATG | 61.112 | 66.667 | 8.75 | 0.00 | 38.94 | 1.78 |
910 | 1716 | 2.254350 | CGTCAGACGCGTCTCCAA | 59.746 | 61.111 | 37.41 | 22.91 | 37.98 | 3.53 |
984 | 1790 | 2.684843 | GCTCAGCACCGGAAAGCAG | 61.685 | 63.158 | 9.46 | 6.40 | 33.21 | 4.24 |
986 | 1792 | 0.392193 | CTCAGCACCGGAAAGCAGAT | 60.392 | 55.000 | 9.46 | 0.00 | 0.00 | 2.90 |
1084 | 1900 | 3.487626 | TGCCTATGGATGCGGCCA | 61.488 | 61.111 | 2.24 | 0.00 | 43.12 | 5.36 |
1095 | 1911 | 2.904866 | GCGGCCAGGAACACAACA | 60.905 | 61.111 | 2.24 | 0.00 | 0.00 | 3.33 |
1110 | 1926 | 3.976701 | AACATTGGGCGAGCTCCGG | 62.977 | 63.158 | 8.47 | 0.00 | 39.04 | 5.14 |
1191 | 2007 | 4.882842 | ACTCCTCTTGTCTTTTCCTCTC | 57.117 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
1192 | 2008 | 4.488770 | ACTCCTCTTGTCTTTTCCTCTCT | 58.511 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
1193 | 2009 | 4.904853 | ACTCCTCTTGTCTTTTCCTCTCTT | 59.095 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
1227 | 2043 | 5.063564 | GGCTTTAGACGACGAGAAATTTGAT | 59.936 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1229 | 2045 | 6.401153 | GCTTTAGACGACGAGAAATTTGATGT | 60.401 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
1262 | 2079 | 3.616956 | TTGAGCCATTGAGGTGAGTAG | 57.383 | 47.619 | 0.00 | 0.00 | 40.61 | 2.57 |
1594 | 3176 | 4.219944 | TGACCTATATACTTCGTCATGGGC | 59.780 | 45.833 | 0.00 | 0.00 | 0.00 | 5.36 |
1625 | 3225 | 9.674068 | ATTTTCTCTTCTACTCCAGTTTTATCC | 57.326 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
1626 | 3226 | 7.792364 | TTCTCTTCTACTCCAGTTTTATCCA | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1632 | 3232 | 6.889198 | TCTACTCCAGTTTTATCCAATCTGG | 58.111 | 40.000 | 0.00 | 0.00 | 44.69 | 3.86 |
1743 | 3352 | 1.676967 | GGGAGACAGGTACGACCGT | 60.677 | 63.158 | 0.00 | 0.00 | 44.90 | 4.83 |
1745 | 3354 | 0.729690 | GGAGACAGGTACGACCGTAC | 59.270 | 60.000 | 20.64 | 20.64 | 44.90 | 3.67 |
1776 | 3824 | 3.488216 | GCTACCCTGTAACAGTACTACGC | 60.488 | 52.174 | 0.00 | 0.00 | 0.00 | 4.42 |
1778 | 3826 | 3.160269 | ACCCTGTAACAGTACTACGCTT | 58.840 | 45.455 | 0.00 | 0.00 | 0.00 | 4.68 |
1779 | 3827 | 3.575687 | ACCCTGTAACAGTACTACGCTTT | 59.424 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
1788 | 3836 | 9.099820 | GTAACAGTACTACGCTTTCAAAATTTC | 57.900 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
1828 | 4065 | 1.136329 | ATGCTGACCCAGGGACAACT | 61.136 | 55.000 | 14.54 | 0.00 | 31.21 | 3.16 |
1829 | 4066 | 0.472925 | TGCTGACCCAGGGACAACTA | 60.473 | 55.000 | 14.54 | 0.00 | 31.21 | 2.24 |
1830 | 4067 | 0.912486 | GCTGACCCAGGGACAACTAT | 59.088 | 55.000 | 14.54 | 0.00 | 31.21 | 2.12 |
1831 | 4068 | 2.116238 | GCTGACCCAGGGACAACTATA | 58.884 | 52.381 | 14.54 | 0.00 | 31.21 | 1.31 |
1862 | 5221 | 4.004196 | ACAAGTTAGTGCTAGAACCACC | 57.996 | 45.455 | 0.00 | 0.00 | 33.75 | 4.61 |
1971 | 5338 | 4.370917 | AGTTTGATGTGGTGTCAAATTGC | 58.629 | 39.130 | 4.81 | 0.00 | 44.56 | 3.56 |
1988 | 5369 | 8.028938 | GTCAAATTGCACTATCCTAACAATTGT | 58.971 | 33.333 | 4.92 | 4.92 | 39.99 | 2.71 |
2006 | 5387 | 7.386059 | ACAATTGTGTCTTTGTTTTCCTTTCT | 58.614 | 30.769 | 11.07 | 0.00 | 32.28 | 2.52 |
2023 | 5404 | 3.861276 | TTCTTTCAGCTGATGCATTGG | 57.139 | 42.857 | 19.04 | 3.31 | 42.74 | 3.16 |
2027 | 5408 | 1.746470 | TCAGCTGATGCATTGGTCAG | 58.254 | 50.000 | 13.74 | 10.14 | 43.62 | 3.51 |
2074 | 5455 | 8.984764 | GCTACAAATATGTTAACATCGGTATGA | 58.015 | 33.333 | 24.00 | 5.91 | 41.05 | 2.15 |
2092 | 5473 | 2.820178 | TGAGTTGCTCTCTGGACCATA | 58.180 | 47.619 | 0.00 | 0.00 | 43.13 | 2.74 |
2131 | 5512 | 7.099764 | ACATGTTGGACAGAACTACTAGATTG | 58.900 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
2139 | 5525 | 9.708092 | GGACAGAACTACTAGATTGTTTTTAGT | 57.292 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2221 | 5607 | 4.563140 | TTGAACAGGGATTACCAGGTAC | 57.437 | 45.455 | 0.00 | 0.00 | 43.89 | 3.34 |
2488 | 5927 | 3.903530 | AAAAGAACATTCCCCTCTGGT | 57.096 | 42.857 | 0.00 | 0.00 | 34.77 | 4.00 |
2618 | 6057 | 5.406649 | TGTTCAATCACTGTGTGGAAAAAC | 58.593 | 37.500 | 7.79 | 7.03 | 33.87 | 2.43 |
2638 | 6080 | 9.736023 | GAAAAACTGTAGGATGGCTAATATTTG | 57.264 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2639 | 6081 | 8.823220 | AAAACTGTAGGATGGCTAATATTTGT | 57.177 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
2640 | 6082 | 7.807977 | AACTGTAGGATGGCTAATATTTGTG | 57.192 | 36.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2645 | 6089 | 6.455360 | AGGATGGCTAATATTTGTGTTGTG | 57.545 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
2836 | 6295 | 0.376152 | GAAGCGGACGATGACGACTA | 59.624 | 55.000 | 0.00 | 0.00 | 42.66 | 2.59 |
3046 | 6510 | 0.310543 | TGTTGCCGATGAGTTGTTGC | 59.689 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3191 | 6676 | 1.269673 | CGCTATGACAGAGCTGCAGAT | 60.270 | 52.381 | 20.43 | 12.64 | 37.81 | 2.90 |
3735 | 7565 | 0.517316 | GCATGTCGTTGGTCTGGTTC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3894 | 7724 | 2.801631 | GCCCTCCAGGTCTCGATGG | 61.802 | 68.421 | 0.00 | 0.00 | 38.26 | 3.51 |
3895 | 7725 | 1.381872 | CCCTCCAGGTCTCGATGGT | 60.382 | 63.158 | 2.83 | 0.00 | 37.84 | 3.55 |
4003 | 7833 | 0.248498 | CTTTGCTCGGCGTAGATCGA | 60.248 | 55.000 | 6.85 | 0.00 | 42.86 | 3.59 |
4039 | 7869 | 2.811431 | CCGGTGCTTCATGTTGAAACTA | 59.189 | 45.455 | 0.00 | 0.00 | 35.73 | 2.24 |
4094 | 8001 | 5.453903 | GCAGACCTTATTGAAGCCTCATCTA | 60.454 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4661 | 9057 | 5.575157 | TGGCTCTTATACCATGTGGAAAAA | 58.425 | 37.500 | 5.96 | 0.00 | 38.94 | 1.94 |
4678 | 9075 | 6.826741 | GTGGAAAAACTGTAGGATGGCTAATA | 59.173 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
4682 | 9079 | 9.736023 | GAAAAACTGTAGGATGGCTAATATTTG | 57.264 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
4686 | 9083 | 7.346471 | ACTGTAGGATGGCTAATATTTGTGTT | 58.654 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
4687 | 9084 | 7.283127 | ACTGTAGGATGGCTAATATTTGTGTTG | 59.717 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
4693 | 9099 | 9.062524 | GGATGGCTAATATTTGTGTTGTGTATA | 57.937 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
4752 | 9163 | 5.432390 | AGAGTACATGAGGGGTAGAGACTTA | 59.568 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5136 | 9590 | 6.551601 | AGGGAGTTGATTATCTGAAGTACGAT | 59.448 | 38.462 | 0.00 | 0.00 | 0.00 | 3.73 |
5163 | 9617 | 1.689243 | ATGATGCTGGCAGGAGCGTA | 61.689 | 55.000 | 17.62 | 1.55 | 42.32 | 4.42 |
5202 | 9660 | 3.326747 | ACAATACCTCGAACTTCAGCAC | 58.673 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
5510 | 9976 | 0.469705 | ACAGGTGCTGCCCAATTGAA | 60.470 | 50.000 | 7.12 | 0.00 | 38.26 | 2.69 |
5703 | 10218 | 5.767816 | AACGATTTGTTAGCTTGGAAGTT | 57.232 | 34.783 | 0.00 | 0.00 | 39.61 | 2.66 |
5704 | 10219 | 5.108385 | ACGATTTGTTAGCTTGGAAGTTG | 57.892 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
5705 | 10220 | 4.023193 | ACGATTTGTTAGCTTGGAAGTTGG | 60.023 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
5706 | 10221 | 4.215399 | CGATTTGTTAGCTTGGAAGTTGGA | 59.785 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
5707 | 10222 | 5.278266 | CGATTTGTTAGCTTGGAAGTTGGAA | 60.278 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
5862 | 10401 | 8.940768 | TTGTTTCGATTCTCAAAAAGGAATTT | 57.059 | 26.923 | 0.00 | 0.00 | 33.05 | 1.82 |
5952 | 10492 | 1.372087 | GATGAGCCCGCAGACAAAGG | 61.372 | 60.000 | 0.00 | 0.00 | 0.00 | 3.11 |
5999 | 10539 | 0.031178 | CTGTCAACCAAGGCAAGCAC | 59.969 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6012 | 10552 | 1.457303 | GCAAGCACTCTCTTACACGTG | 59.543 | 52.381 | 15.48 | 15.48 | 0.00 | 4.49 |
6063 | 10605 | 8.768397 | TGGGATTTTCAATGTACTCATACTACT | 58.232 | 33.333 | 0.00 | 0.00 | 33.49 | 2.57 |
6132 | 10675 | 3.016736 | CGATGCTGGTTTGGAGGTATTT | 58.983 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
6320 | 10866 | 2.832201 | GGGCTTCCAGCATCTGCC | 60.832 | 66.667 | 0.00 | 0.00 | 44.75 | 4.85 |
6326 | 10872 | 1.841302 | TTCCAGCATCTGCCTCCGTT | 61.841 | 55.000 | 0.00 | 0.00 | 43.38 | 4.44 |
6408 | 10954 | 3.587061 | ACAATCCACTACACATTCCAGGA | 59.413 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
6520 | 11067 | 5.804639 | ACTGCAAGATGTACATCCTAACAA | 58.195 | 37.500 | 28.26 | 11.52 | 38.58 | 2.83 |
6534 | 11081 | 6.932960 | ACATCCTAACAACCAAGTAACTGTAC | 59.067 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
6570 | 11117 | 4.074627 | AGTCGATCGATCTAGTTCAGGA | 57.925 | 45.455 | 22.50 | 7.47 | 0.00 | 3.86 |
6581 | 11129 | 2.959465 | AGTTCAGGAGAAGGGTTTGG | 57.041 | 50.000 | 0.00 | 0.00 | 33.63 | 3.28 |
6585 | 11133 | 2.701551 | TCAGGAGAAGGGTTTGGAAGA | 58.298 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
6592 | 11140 | 5.281037 | GGAGAAGGGTTTGGAAGAAAGGATA | 60.281 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
6593 | 11141 | 5.821097 | AGAAGGGTTTGGAAGAAAGGATAG | 58.179 | 41.667 | 0.00 | 0.00 | 0.00 | 2.08 |
6594 | 11142 | 5.551977 | AGAAGGGTTTGGAAGAAAGGATAGA | 59.448 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
6595 | 11143 | 6.218522 | AGAAGGGTTTGGAAGAAAGGATAGAT | 59.781 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
6605 | 11153 | 8.173412 | TGGAAGAAAGGATAGATAGATAGAGCA | 58.827 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
6629 | 11177 | 5.427806 | AGAGATGAGGTGAATTGAGGAATGA | 59.572 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6652 | 11201 | 8.415192 | TGACATTTGGTTATATGACGTTAGAC | 57.585 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
6675 | 11224 | 9.784531 | AGACATAAGCTGCAATAGTATGTAAAT | 57.215 | 29.630 | 1.02 | 0.00 | 0.00 | 1.40 |
6770 | 11325 | 6.611642 | TGGGTTTCATAGCACTATCTTCTACT | 59.388 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
6771 | 11326 | 7.149307 | GGGTTTCATAGCACTATCTTCTACTC | 58.851 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
6772 | 11327 | 7.149307 | GGTTTCATAGCACTATCTTCTACTCC | 58.851 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
6773 | 11328 | 6.902771 | TTCATAGCACTATCTTCTACTCCC | 57.097 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
6774 | 11329 | 6.207509 | TCATAGCACTATCTTCTACTCCCT | 57.792 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
6775 | 11330 | 6.242396 | TCATAGCACTATCTTCTACTCCCTC | 58.758 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6776 | 11331 | 3.839778 | AGCACTATCTTCTACTCCCTCC | 58.160 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6777 | 11332 | 2.554893 | GCACTATCTTCTACTCCCTCCG | 59.445 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
6778 | 11333 | 3.822940 | CACTATCTTCTACTCCCTCCGT | 58.177 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
6779 | 11334 | 4.208746 | CACTATCTTCTACTCCCTCCGTT | 58.791 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
6780 | 11335 | 4.276431 | CACTATCTTCTACTCCCTCCGTTC | 59.724 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
6781 | 11336 | 1.747709 | TCTTCTACTCCCTCCGTTCG | 58.252 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
6782 | 11337 | 1.280133 | TCTTCTACTCCCTCCGTTCGA | 59.720 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
6783 | 11338 | 2.089980 | CTTCTACTCCCTCCGTTCGAA | 58.910 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
6784 | 11339 | 2.205022 | TCTACTCCCTCCGTTCGAAA | 57.795 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
6785 | 11340 | 2.517959 | TCTACTCCCTCCGTTCGAAAA | 58.482 | 47.619 | 0.00 | 0.00 | 0.00 | 2.29 |
6786 | 11341 | 3.094572 | TCTACTCCCTCCGTTCGAAAAT | 58.905 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
6787 | 11342 | 4.272489 | TCTACTCCCTCCGTTCGAAAATA | 58.728 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
6788 | 11343 | 3.242549 | ACTCCCTCCGTTCGAAAATAC | 57.757 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
6789 | 11344 | 2.830321 | ACTCCCTCCGTTCGAAAATACT | 59.170 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
6790 | 11345 | 3.260128 | ACTCCCTCCGTTCGAAAATACTT | 59.740 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
6791 | 11346 | 3.592059 | TCCCTCCGTTCGAAAATACTTG | 58.408 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
6792 | 11347 | 3.007182 | TCCCTCCGTTCGAAAATACTTGT | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
6793 | 11348 | 3.370061 | CCCTCCGTTCGAAAATACTTGTC | 59.630 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
6794 | 11349 | 3.991773 | CCTCCGTTCGAAAATACTTGTCA | 59.008 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
6795 | 11350 | 4.630069 | CCTCCGTTCGAAAATACTTGTCAT | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
6796 | 11351 | 5.220416 | CCTCCGTTCGAAAATACTTGTCATC | 60.220 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
6797 | 11352 | 5.231702 | TCCGTTCGAAAATACTTGTCATCA | 58.768 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
6798 | 11353 | 5.697178 | TCCGTTCGAAAATACTTGTCATCAA | 59.303 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6799 | 11354 | 6.203145 | TCCGTTCGAAAATACTTGTCATCAAA | 59.797 | 34.615 | 0.00 | 0.00 | 32.87 | 2.69 |
6800 | 11355 | 6.853872 | CCGTTCGAAAATACTTGTCATCAAAA | 59.146 | 34.615 | 0.00 | 0.00 | 32.87 | 2.44 |
6801 | 11356 | 7.537306 | CCGTTCGAAAATACTTGTCATCAAAAT | 59.463 | 33.333 | 0.00 | 0.00 | 32.87 | 1.82 |
6802 | 11357 | 8.357966 | CGTTCGAAAATACTTGTCATCAAAATG | 58.642 | 33.333 | 0.00 | 0.00 | 32.87 | 2.32 |
6803 | 11358 | 8.638565 | GTTCGAAAATACTTGTCATCAAAATGG | 58.361 | 33.333 | 0.00 | 0.00 | 33.42 | 3.16 |
6804 | 11359 | 8.105097 | TCGAAAATACTTGTCATCAAAATGGA | 57.895 | 30.769 | 0.00 | 0.00 | 33.42 | 3.41 |
6805 | 11360 | 8.020819 | TCGAAAATACTTGTCATCAAAATGGAC | 58.979 | 33.333 | 0.00 | 0.00 | 33.42 | 4.02 |
6806 | 11361 | 7.807433 | CGAAAATACTTGTCATCAAAATGGACA | 59.193 | 33.333 | 0.00 | 0.00 | 33.42 | 4.02 |
6807 | 11362 | 9.474920 | GAAAATACTTGTCATCAAAATGGACAA | 57.525 | 29.630 | 0.00 | 0.00 | 34.59 | 3.18 |
6808 | 11363 | 9.829507 | AAAATACTTGTCATCAAAATGGACAAA | 57.170 | 25.926 | 7.70 | 0.00 | 34.98 | 2.83 |
6809 | 11364 | 9.829507 | AAATACTTGTCATCAAAATGGACAAAA | 57.170 | 25.926 | 7.70 | 0.84 | 34.98 | 2.44 |
6810 | 11365 | 9.829507 | AATACTTGTCATCAAAATGGACAAAAA | 57.170 | 25.926 | 7.70 | 0.55 | 34.98 | 1.94 |
6811 | 11366 | 7.775397 | ACTTGTCATCAAAATGGACAAAAAG | 57.225 | 32.000 | 7.70 | 0.11 | 34.98 | 2.27 |
6812 | 11367 | 7.555087 | ACTTGTCATCAAAATGGACAAAAAGA | 58.445 | 30.769 | 7.70 | 0.00 | 34.98 | 2.52 |
6813 | 11368 | 7.707893 | ACTTGTCATCAAAATGGACAAAAAGAG | 59.292 | 33.333 | 7.70 | 0.00 | 34.98 | 2.85 |
6814 | 11369 | 7.345422 | TGTCATCAAAATGGACAAAAAGAGA | 57.655 | 32.000 | 0.00 | 0.00 | 33.42 | 3.10 |
6815 | 11370 | 7.954835 | TGTCATCAAAATGGACAAAAAGAGAT | 58.045 | 30.769 | 0.00 | 0.00 | 33.42 | 2.75 |
6816 | 11371 | 9.076781 | TGTCATCAAAATGGACAAAAAGAGATA | 57.923 | 29.630 | 0.00 | 0.00 | 33.42 | 1.98 |
6873 | 11428 | 9.918630 | CTCCTTTTATTCATTTTGATGACAAGT | 57.081 | 29.630 | 0.00 | 0.00 | 37.32 | 3.16 |
6880 | 11435 | 8.915871 | ATTCATTTTGATGACAAGTATTTCCG | 57.084 | 30.769 | 0.00 | 0.00 | 37.32 | 4.30 |
6881 | 11436 | 6.851609 | TCATTTTGATGACAAGTATTTCCGG | 58.148 | 36.000 | 0.00 | 0.00 | 37.32 | 5.14 |
6882 | 11437 | 6.657117 | TCATTTTGATGACAAGTATTTCCGGA | 59.343 | 34.615 | 0.00 | 0.00 | 37.32 | 5.14 |
6883 | 11438 | 5.873179 | TTTGATGACAAGTATTTCCGGAC | 57.127 | 39.130 | 1.83 | 0.00 | 37.32 | 4.79 |
6884 | 11439 | 3.517602 | TGATGACAAGTATTTCCGGACG | 58.482 | 45.455 | 1.83 | 0.00 | 0.00 | 4.79 |
6885 | 11440 | 2.373540 | TGACAAGTATTTCCGGACGG | 57.626 | 50.000 | 1.83 | 3.96 | 0.00 | 4.79 |
6886 | 11441 | 1.894466 | TGACAAGTATTTCCGGACGGA | 59.106 | 47.619 | 1.83 | 9.76 | 43.52 | 4.69 |
6887 | 11442 | 2.094390 | TGACAAGTATTTCCGGACGGAG | 60.094 | 50.000 | 13.64 | 3.15 | 46.06 | 4.63 |
6888 | 11443 | 1.206371 | ACAAGTATTTCCGGACGGAGG | 59.794 | 52.381 | 13.64 | 0.00 | 46.06 | 4.30 |
6889 | 11444 | 0.828677 | AAGTATTTCCGGACGGAGGG | 59.171 | 55.000 | 13.64 | 0.00 | 46.06 | 4.30 |
6890 | 11445 | 0.032813 | AGTATTTCCGGACGGAGGGA | 60.033 | 55.000 | 13.64 | 4.95 | 46.06 | 4.20 |
6891 | 11446 | 0.388294 | GTATTTCCGGACGGAGGGAG | 59.612 | 60.000 | 13.64 | 0.00 | 46.06 | 4.30 |
6892 | 11447 | 0.032813 | TATTTCCGGACGGAGGGAGT | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 3.85 |
6893 | 11448 | 0.032813 | ATTTCCGGACGGAGGGAGTA | 60.033 | 55.000 | 13.64 | 0.00 | 46.06 | 2.59 |
6894 | 11449 | 0.967380 | TTTCCGGACGGAGGGAGTAC | 60.967 | 60.000 | 13.64 | 0.00 | 46.06 | 2.73 |
6920 | 11475 | 6.448369 | TGAGGTTTCTCCCTGAAATTCTTA | 57.552 | 37.500 | 0.00 | 0.00 | 45.19 | 2.10 |
7140 | 11718 | 1.539776 | CCAAGCACGCTTCGCAAAAC | 61.540 | 55.000 | 0.16 | 0.00 | 33.42 | 2.43 |
7182 | 11760 | 7.174772 | TGCTGATGTAGTTACATGTTGAATTGT | 59.825 | 33.333 | 2.30 | 0.00 | 46.20 | 2.71 |
7187 | 11765 | 9.840427 | ATGTAGTTACATGTTGAATTGTAAAGC | 57.160 | 29.630 | 2.30 | 0.00 | 44.66 | 3.51 |
7220 | 11804 | 1.478105 | GCTACCCAATTTCAGCAAGGG | 59.522 | 52.381 | 0.00 | 0.00 | 45.20 | 3.95 |
7240 | 11824 | 1.618837 | GTAGGTGCCACAACAGAGAGA | 59.381 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
7280 | 11864 | 3.253432 | CCAGAGGTTGACCAAAGCTAAAC | 59.747 | 47.826 | 2.56 | 0.00 | 46.56 | 2.01 |
7282 | 11866 | 4.338118 | CAGAGGTTGACCAAAGCTAAACAA | 59.662 | 41.667 | 2.56 | 0.00 | 46.56 | 2.83 |
7293 | 11877 | 3.695830 | AGCTAAACAATCGGTCTCCAA | 57.304 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
7297 | 11881 | 5.992217 | AGCTAAACAATCGGTCTCCAATATC | 59.008 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
7299 | 11883 | 6.292919 | GCTAAACAATCGGTCTCCAATATCAC | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
7309 | 11893 | 5.757320 | GGTCTCCAATATCACATGAGTTGAG | 59.243 | 44.000 | 0.00 | 6.93 | 0.00 | 3.02 |
7310 | 11894 | 5.236047 | GTCTCCAATATCACATGAGTTGAGC | 59.764 | 44.000 | 0.00 | 0.00 | 0.00 | 4.26 |
7323 | 11907 | 4.194640 | TGAGTTGAGCCTCTCATATTTGC | 58.805 | 43.478 | 0.00 | 0.00 | 40.39 | 3.68 |
7335 | 11919 | 6.587608 | CCTCTCATATTTGCAAAAAGAACACC | 59.412 | 38.462 | 17.19 | 0.00 | 0.00 | 4.16 |
7340 | 11924 | 7.867403 | TCATATTTGCAAAAAGAACACCTTCTC | 59.133 | 33.333 | 17.19 | 0.00 | 35.52 | 2.87 |
7353 | 11937 | 2.158449 | CACCTTCTCGAAGTGACAATGC | 59.842 | 50.000 | 5.99 | 0.00 | 36.72 | 3.56 |
7355 | 11939 | 2.613977 | CCTTCTCGAAGTGACAATGCCT | 60.614 | 50.000 | 5.99 | 0.00 | 36.72 | 4.75 |
7357 | 11941 | 1.895798 | TCTCGAAGTGACAATGCCTCT | 59.104 | 47.619 | 0.00 | 0.00 | 0.00 | 3.69 |
7386 | 11971 | 0.331616 | GGGCCAGTCACCCTTAATGT | 59.668 | 55.000 | 4.39 | 0.00 | 44.68 | 2.71 |
7395 | 11980 | 3.320826 | GTCACCCTTAATGTGGTTTGCTT | 59.679 | 43.478 | 5.68 | 0.00 | 34.46 | 3.91 |
7396 | 11981 | 3.964031 | TCACCCTTAATGTGGTTTGCTTT | 59.036 | 39.130 | 5.68 | 0.00 | 34.46 | 3.51 |
7399 | 11984 | 5.925969 | CACCCTTAATGTGGTTTGCTTTAAG | 59.074 | 40.000 | 0.00 | 0.00 | 35.32 | 1.85 |
7424 | 12009 | 1.011463 | GCAAGCATGTCGATGAGCG | 60.011 | 57.895 | 0.00 | 0.00 | 42.69 | 5.03 |
7434 | 12019 | 0.317854 | TCGATGAGCGAGCAATACCG | 60.318 | 55.000 | 0.00 | 0.00 | 45.59 | 4.02 |
7440 | 12025 | 3.272334 | CGAGCAATACCGCAGCCC | 61.272 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
7441 | 12026 | 2.902343 | GAGCAATACCGCAGCCCC | 60.902 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
7443 | 12028 | 2.440247 | GCAATACCGCAGCCCCTT | 60.440 | 61.111 | 0.00 | 0.00 | 0.00 | 3.95 |
7447 | 12032 | 1.571773 | AATACCGCAGCCCCTTCCTT | 61.572 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7449 | 12034 | 4.803908 | CCGCAGCCCCTTCCTTCC | 62.804 | 72.222 | 0.00 | 0.00 | 0.00 | 3.46 |
7455 | 12040 | 0.553612 | AGCCCCTTCCTTCCCAGAAT | 60.554 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
7459 | 12044 | 1.407437 | CCCTTCCTTCCCAGAATCGTG | 60.407 | 57.143 | 0.00 | 0.00 | 0.00 | 4.35 |
7466 | 12051 | 4.122776 | CCTTCCCAGAATCGTGACTAATG | 58.877 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
7503 | 12088 | 7.465353 | TTGATCTTTATGAAAGGTGCATCAA | 57.535 | 32.000 | 0.00 | 8.55 | 36.49 | 2.57 |
7506 | 12091 | 4.706476 | TCTTTATGAAAGGTGCATCAAGGG | 59.294 | 41.667 | 0.00 | 0.00 | 39.01 | 3.95 |
7508 | 12093 | 0.482446 | TGAAAGGTGCATCAAGGGGT | 59.518 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
7509 | 12094 | 1.133199 | TGAAAGGTGCATCAAGGGGTT | 60.133 | 47.619 | 0.00 | 0.00 | 0.00 | 4.11 |
7528 | 12113 | 1.065647 | TTCCAACCATGTCCGGGTTA | 58.934 | 50.000 | 0.00 | 0.00 | 46.60 | 2.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4.428294 | AGAAACGGACATGATCATCCAT | 57.572 | 40.909 | 14.34 | 0.00 | 34.35 | 3.41 |
1 | 2 | 3.912496 | AGAAACGGACATGATCATCCA | 57.088 | 42.857 | 14.34 | 0.00 | 34.35 | 3.41 |
2 | 3 | 3.246226 | CGAAGAAACGGACATGATCATCC | 59.754 | 47.826 | 4.86 | 5.17 | 0.00 | 3.51 |
4 | 5 | 3.618594 | CACGAAGAAACGGACATGATCAT | 59.381 | 43.478 | 1.18 | 1.18 | 37.61 | 2.45 |
5 | 6 | 2.993220 | CACGAAGAAACGGACATGATCA | 59.007 | 45.455 | 0.00 | 0.00 | 37.61 | 2.92 |
6 | 7 | 2.993899 | ACACGAAGAAACGGACATGATC | 59.006 | 45.455 | 0.00 | 0.00 | 37.61 | 2.92 |
7 | 8 | 3.040147 | ACACGAAGAAACGGACATGAT | 57.960 | 42.857 | 0.00 | 0.00 | 37.61 | 2.45 |
8 | 9 | 2.519377 | ACACGAAGAAACGGACATGA | 57.481 | 45.000 | 0.00 | 0.00 | 37.61 | 3.07 |
9 | 10 | 2.903678 | CAACACGAAGAAACGGACATG | 58.096 | 47.619 | 0.00 | 0.00 | 37.61 | 3.21 |
10 | 11 | 1.263217 | GCAACACGAAGAAACGGACAT | 59.737 | 47.619 | 0.00 | 0.00 | 37.61 | 3.06 |
11 | 12 | 0.653636 | GCAACACGAAGAAACGGACA | 59.346 | 50.000 | 0.00 | 0.00 | 37.61 | 4.02 |
12 | 13 | 0.653636 | TGCAACACGAAGAAACGGAC | 59.346 | 50.000 | 0.00 | 0.00 | 37.61 | 4.79 |
13 | 14 | 0.934496 | CTGCAACACGAAGAAACGGA | 59.066 | 50.000 | 0.00 | 0.00 | 37.61 | 4.69 |
14 | 15 | 0.934496 | TCTGCAACACGAAGAAACGG | 59.066 | 50.000 | 0.00 | 0.00 | 37.61 | 4.44 |
15 | 16 | 2.563976 | CATCTGCAACACGAAGAAACG | 58.436 | 47.619 | 0.00 | 0.00 | 39.31 | 3.60 |
16 | 17 | 2.310577 | GCATCTGCAACACGAAGAAAC | 58.689 | 47.619 | 0.00 | 0.00 | 41.59 | 2.78 |
17 | 18 | 1.069973 | CGCATCTGCAACACGAAGAAA | 60.070 | 47.619 | 2.72 | 0.00 | 42.21 | 2.52 |
18 | 19 | 0.512518 | CGCATCTGCAACACGAAGAA | 59.487 | 50.000 | 2.72 | 0.00 | 42.21 | 2.52 |
19 | 20 | 1.291184 | CCGCATCTGCAACACGAAGA | 61.291 | 55.000 | 2.72 | 0.00 | 42.21 | 2.87 |
20 | 21 | 1.133253 | CCGCATCTGCAACACGAAG | 59.867 | 57.895 | 2.72 | 0.00 | 42.21 | 3.79 |
21 | 22 | 0.673333 | ATCCGCATCTGCAACACGAA | 60.673 | 50.000 | 2.72 | 0.00 | 42.21 | 3.85 |
22 | 23 | 1.079197 | ATCCGCATCTGCAACACGA | 60.079 | 52.632 | 2.72 | 0.00 | 42.21 | 4.35 |
23 | 24 | 1.061411 | CATCCGCATCTGCAACACG | 59.939 | 57.895 | 2.72 | 0.00 | 42.21 | 4.49 |
24 | 25 | 1.430632 | CCATCCGCATCTGCAACAC | 59.569 | 57.895 | 2.72 | 0.00 | 42.21 | 3.32 |
25 | 26 | 1.750018 | CCCATCCGCATCTGCAACA | 60.750 | 57.895 | 2.72 | 0.00 | 42.21 | 3.33 |
26 | 27 | 1.315257 | AACCCATCCGCATCTGCAAC | 61.315 | 55.000 | 2.72 | 0.00 | 42.21 | 4.17 |
27 | 28 | 0.254462 | TAACCCATCCGCATCTGCAA | 59.746 | 50.000 | 2.72 | 0.00 | 42.21 | 4.08 |
28 | 29 | 0.473755 | ATAACCCATCCGCATCTGCA | 59.526 | 50.000 | 2.72 | 0.00 | 42.21 | 4.41 |
29 | 30 | 1.609208 | AATAACCCATCCGCATCTGC | 58.391 | 50.000 | 0.00 | 0.00 | 37.78 | 4.26 |
30 | 31 | 3.243501 | CCAAAATAACCCATCCGCATCTG | 60.244 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
31 | 32 | 2.958355 | CCAAAATAACCCATCCGCATCT | 59.042 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
32 | 33 | 2.035832 | CCCAAAATAACCCATCCGCATC | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
33 | 34 | 2.038659 | CCCAAAATAACCCATCCGCAT | 58.961 | 47.619 | 0.00 | 0.00 | 0.00 | 4.73 |
34 | 35 | 1.006043 | TCCCAAAATAACCCATCCGCA | 59.994 | 47.619 | 0.00 | 0.00 | 0.00 | 5.69 |
35 | 36 | 1.407618 | GTCCCAAAATAACCCATCCGC | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
36 | 37 | 1.673920 | CGTCCCAAAATAACCCATCCG | 59.326 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
37 | 38 | 1.407618 | GCGTCCCAAAATAACCCATCC | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
38 | 39 | 2.375146 | AGCGTCCCAAAATAACCCATC | 58.625 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
39 | 40 | 2.525105 | AGCGTCCCAAAATAACCCAT | 57.475 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
40 | 41 | 2.296073 | AAGCGTCCCAAAATAACCCA | 57.704 | 45.000 | 0.00 | 0.00 | 0.00 | 4.51 |
41 | 42 | 2.823747 | AGAAAGCGTCCCAAAATAACCC | 59.176 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
42 | 43 | 3.833442 | CAGAAAGCGTCCCAAAATAACC | 58.167 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
43 | 44 | 3.242518 | GCAGAAAGCGTCCCAAAATAAC | 58.757 | 45.455 | 0.00 | 0.00 | 0.00 | 1.89 |
44 | 45 | 3.569250 | GCAGAAAGCGTCCCAAAATAA | 57.431 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
63 | 64 | 1.298157 | GCAAGAATTTTTGCCCCGGC | 61.298 | 55.000 | 20.13 | 0.00 | 45.93 | 6.13 |
64 | 65 | 2.839629 | GCAAGAATTTTTGCCCCGG | 58.160 | 52.632 | 20.13 | 0.00 | 45.93 | 5.73 |
70 | 71 | 3.735746 | GGTTCACTCGGCAAGAATTTTTG | 59.264 | 43.478 | 4.38 | 4.38 | 0.00 | 2.44 |
71 | 72 | 3.383185 | TGGTTCACTCGGCAAGAATTTTT | 59.617 | 39.130 | 0.00 | 0.00 | 0.00 | 1.94 |
72 | 73 | 2.955660 | TGGTTCACTCGGCAAGAATTTT | 59.044 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
73 | 74 | 2.293399 | GTGGTTCACTCGGCAAGAATTT | 59.707 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
74 | 75 | 1.880027 | GTGGTTCACTCGGCAAGAATT | 59.120 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
75 | 76 | 1.523758 | GTGGTTCACTCGGCAAGAAT | 58.476 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
76 | 77 | 0.534203 | GGTGGTTCACTCGGCAAGAA | 60.534 | 55.000 | 0.00 | 0.00 | 34.40 | 2.52 |
77 | 78 | 1.070786 | GGTGGTTCACTCGGCAAGA | 59.929 | 57.895 | 0.00 | 0.00 | 34.40 | 3.02 |
78 | 79 | 0.951040 | GAGGTGGTTCACTCGGCAAG | 60.951 | 60.000 | 0.00 | 0.00 | 34.40 | 4.01 |
79 | 80 | 1.070786 | GAGGTGGTTCACTCGGCAA | 59.929 | 57.895 | 0.00 | 0.00 | 34.40 | 4.52 |
80 | 81 | 2.741092 | GAGGTGGTTCACTCGGCA | 59.259 | 61.111 | 0.00 | 0.00 | 34.40 | 5.69 |
81 | 82 | 2.432628 | CGAGGTGGTTCACTCGGC | 60.433 | 66.667 | 6.21 | 0.00 | 34.25 | 5.54 |
82 | 83 | 2.432628 | GCGAGGTGGTTCACTCGG | 60.433 | 66.667 | 14.75 | 0.00 | 36.41 | 4.63 |
83 | 84 | 1.006102 | AAGCGAGGTGGTTCACTCG | 60.006 | 57.895 | 9.47 | 9.47 | 37.73 | 4.18 |
84 | 85 | 0.033504 | TCAAGCGAGGTGGTTCACTC | 59.966 | 55.000 | 0.00 | 0.00 | 35.75 | 3.51 |
85 | 86 | 0.249911 | GTCAAGCGAGGTGGTTCACT | 60.250 | 55.000 | 0.00 | 0.00 | 35.75 | 3.41 |
86 | 87 | 0.531974 | TGTCAAGCGAGGTGGTTCAC | 60.532 | 55.000 | 0.00 | 0.00 | 35.75 | 3.18 |
87 | 88 | 0.531974 | GTGTCAAGCGAGGTGGTTCA | 60.532 | 55.000 | 0.00 | 0.00 | 35.75 | 3.18 |
88 | 89 | 1.228657 | GGTGTCAAGCGAGGTGGTTC | 61.229 | 60.000 | 0.00 | 0.00 | 35.75 | 3.62 |
89 | 90 | 1.227853 | GGTGTCAAGCGAGGTGGTT | 60.228 | 57.895 | 0.00 | 0.00 | 39.32 | 3.67 |
90 | 91 | 1.696097 | AAGGTGTCAAGCGAGGTGGT | 61.696 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
91 | 92 | 0.951040 | GAAGGTGTCAAGCGAGGTGG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
92 | 93 | 0.951040 | GGAAGGTGTCAAGCGAGGTG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
93 | 94 | 1.371558 | GGAAGGTGTCAAGCGAGGT | 59.628 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
94 | 95 | 1.376037 | GGGAAGGTGTCAAGCGAGG | 60.376 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
95 | 96 | 0.895530 | TAGGGAAGGTGTCAAGCGAG | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
96 | 97 | 1.344065 | TTAGGGAAGGTGTCAAGCGA | 58.656 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
97 | 98 | 2.178912 | TTTAGGGAAGGTGTCAAGCG | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 4.68 |
98 | 99 | 2.755103 | CCATTTAGGGAAGGTGTCAAGC | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
99 | 100 | 4.301072 | TCCATTTAGGGAAGGTGTCAAG | 57.699 | 45.455 | 0.00 | 0.00 | 38.24 | 3.02 |
100 | 101 | 4.290985 | TGATCCATTTAGGGAAGGTGTCAA | 59.709 | 41.667 | 0.00 | 0.00 | 41.12 | 3.18 |
101 | 102 | 3.849574 | TGATCCATTTAGGGAAGGTGTCA | 59.150 | 43.478 | 0.00 | 0.00 | 41.12 | 3.58 |
102 | 103 | 4.503714 | TGATCCATTTAGGGAAGGTGTC | 57.496 | 45.455 | 0.00 | 0.00 | 41.12 | 3.67 |
103 | 104 | 4.946160 | TTGATCCATTTAGGGAAGGTGT | 57.054 | 40.909 | 0.00 | 0.00 | 41.12 | 4.16 |
104 | 105 | 4.646492 | CCTTTGATCCATTTAGGGAAGGTG | 59.354 | 45.833 | 0.00 | 0.00 | 41.12 | 4.00 |
105 | 106 | 4.544152 | TCCTTTGATCCATTTAGGGAAGGT | 59.456 | 41.667 | 0.00 | 0.00 | 41.12 | 3.50 |
106 | 107 | 5.129368 | TCCTTTGATCCATTTAGGGAAGG | 57.871 | 43.478 | 0.00 | 0.00 | 41.12 | 3.46 |
107 | 108 | 6.705863 | CTTCCTTTGATCCATTTAGGGAAG | 57.294 | 41.667 | 0.00 | 0.00 | 41.12 | 3.46 |
108 | 109 | 6.152638 | ACTTCCTTTGATCCATTTAGGGAA | 57.847 | 37.500 | 0.00 | 0.00 | 41.12 | 3.97 |
109 | 110 | 5.252863 | TGACTTCCTTTGATCCATTTAGGGA | 59.747 | 40.000 | 0.00 | 0.00 | 42.21 | 4.20 |
110 | 111 | 5.509498 | TGACTTCCTTTGATCCATTTAGGG | 58.491 | 41.667 | 0.00 | 0.00 | 38.24 | 3.53 |
111 | 112 | 7.651027 | AATGACTTCCTTTGATCCATTTAGG | 57.349 | 36.000 | 0.00 | 0.00 | 39.47 | 2.69 |
113 | 114 | 8.673711 | CGTAAATGACTTCCTTTGATCCATTTA | 58.326 | 33.333 | 0.00 | 0.00 | 35.32 | 1.40 |
114 | 115 | 7.176690 | ACGTAAATGACTTCCTTTGATCCATTT | 59.823 | 33.333 | 0.00 | 0.00 | 36.86 | 2.32 |
115 | 116 | 6.659242 | ACGTAAATGACTTCCTTTGATCCATT | 59.341 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
116 | 117 | 6.180472 | ACGTAAATGACTTCCTTTGATCCAT | 58.820 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
117 | 118 | 5.556915 | ACGTAAATGACTTCCTTTGATCCA | 58.443 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
118 | 119 | 6.496338 | AACGTAAATGACTTCCTTTGATCC | 57.504 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
119 | 120 | 7.961283 | GGTTAACGTAAATGACTTCCTTTGATC | 59.039 | 37.037 | 0.00 | 0.00 | 0.00 | 2.92 |
120 | 121 | 7.094506 | GGGTTAACGTAAATGACTTCCTTTGAT | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
121 | 122 | 6.205270 | GGGTTAACGTAAATGACTTCCTTTGA | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
122 | 123 | 6.016943 | TGGGTTAACGTAAATGACTTCCTTTG | 60.017 | 38.462 | 0.00 | 0.00 | 0.00 | 2.77 |
123 | 124 | 6.063404 | TGGGTTAACGTAAATGACTTCCTTT | 58.937 | 36.000 | 0.00 | 0.00 | 0.00 | 3.11 |
124 | 125 | 5.623169 | TGGGTTAACGTAAATGACTTCCTT | 58.377 | 37.500 | 0.00 | 0.00 | 0.00 | 3.36 |
125 | 126 | 5.012354 | TCTGGGTTAACGTAAATGACTTCCT | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
126 | 127 | 5.240121 | TCTGGGTTAACGTAAATGACTTCC | 58.760 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
127 | 128 | 5.350640 | CCTCTGGGTTAACGTAAATGACTTC | 59.649 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
128 | 129 | 5.012354 | TCCTCTGGGTTAACGTAAATGACTT | 59.988 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
129 | 130 | 4.529377 | TCCTCTGGGTTAACGTAAATGACT | 59.471 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
130 | 131 | 4.824289 | TCCTCTGGGTTAACGTAAATGAC | 58.176 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
131 | 132 | 5.424252 | AGATCCTCTGGGTTAACGTAAATGA | 59.576 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
132 | 133 | 5.671493 | AGATCCTCTGGGTTAACGTAAATG | 58.329 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
133 | 134 | 5.952347 | AGATCCTCTGGGTTAACGTAAAT | 57.048 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
134 | 135 | 5.482878 | AGAAGATCCTCTGGGTTAACGTAAA | 59.517 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
135 | 136 | 5.021458 | AGAAGATCCTCTGGGTTAACGTAA | 58.979 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
136 | 137 | 4.607239 | AGAAGATCCTCTGGGTTAACGTA | 58.393 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
137 | 138 | 3.442076 | AGAAGATCCTCTGGGTTAACGT | 58.558 | 45.455 | 0.00 | 0.00 | 0.00 | 3.99 |
138 | 139 | 4.497674 | CGTAGAAGATCCTCTGGGTTAACG | 60.498 | 50.000 | 3.97 | 1.35 | 0.00 | 3.18 |
139 | 140 | 4.202131 | CCGTAGAAGATCCTCTGGGTTAAC | 60.202 | 50.000 | 3.97 | 0.00 | 0.00 | 2.01 |
140 | 141 | 3.958798 | CCGTAGAAGATCCTCTGGGTTAA | 59.041 | 47.826 | 3.97 | 0.00 | 0.00 | 2.01 |
141 | 142 | 3.563223 | CCGTAGAAGATCCTCTGGGTTA | 58.437 | 50.000 | 3.97 | 0.00 | 0.00 | 2.85 |
142 | 143 | 2.389715 | CCGTAGAAGATCCTCTGGGTT | 58.610 | 52.381 | 3.97 | 0.00 | 0.00 | 4.11 |
143 | 144 | 1.411787 | CCCGTAGAAGATCCTCTGGGT | 60.412 | 57.143 | 3.97 | 0.00 | 0.00 | 4.51 |
144 | 145 | 1.133450 | TCCCGTAGAAGATCCTCTGGG | 60.133 | 57.143 | 9.58 | 9.58 | 34.03 | 4.45 |
145 | 146 | 1.957877 | GTCCCGTAGAAGATCCTCTGG | 59.042 | 57.143 | 3.97 | 0.00 | 0.00 | 3.86 |
146 | 147 | 2.621055 | CAGTCCCGTAGAAGATCCTCTG | 59.379 | 54.545 | 3.97 | 0.00 | 0.00 | 3.35 |
147 | 148 | 2.242708 | ACAGTCCCGTAGAAGATCCTCT | 59.757 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
148 | 149 | 2.657143 | ACAGTCCCGTAGAAGATCCTC | 58.343 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
149 | 150 | 2.830651 | ACAGTCCCGTAGAAGATCCT | 57.169 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
150 | 151 | 4.142790 | TCATACAGTCCCGTAGAAGATCC | 58.857 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
151 | 152 | 5.968528 | ATCATACAGTCCCGTAGAAGATC | 57.031 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
152 | 153 | 6.323996 | TCAAATCATACAGTCCCGTAGAAGAT | 59.676 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
153 | 154 | 5.655090 | TCAAATCATACAGTCCCGTAGAAGA | 59.345 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
154 | 155 | 5.902681 | TCAAATCATACAGTCCCGTAGAAG | 58.097 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
155 | 156 | 5.925506 | TCAAATCATACAGTCCCGTAGAA | 57.074 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
156 | 157 | 7.450323 | TCATATCAAATCATACAGTCCCGTAGA | 59.550 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
157 | 158 | 7.542477 | GTCATATCAAATCATACAGTCCCGTAG | 59.458 | 40.741 | 0.00 | 0.00 | 0.00 | 3.51 |
158 | 159 | 7.014808 | TGTCATATCAAATCATACAGTCCCGTA | 59.985 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
159 | 160 | 6.183360 | TGTCATATCAAATCATACAGTCCCGT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 5.28 |
160 | 161 | 6.223120 | TGTCATATCAAATCATACAGTCCCG | 58.777 | 40.000 | 0.00 | 0.00 | 0.00 | 5.14 |
161 | 162 | 6.148480 | GCTGTCATATCAAATCATACAGTCCC | 59.852 | 42.308 | 0.00 | 0.00 | 36.20 | 4.46 |
162 | 163 | 6.933521 | AGCTGTCATATCAAATCATACAGTCC | 59.066 | 38.462 | 0.00 | 0.00 | 36.20 | 3.85 |
163 | 164 | 7.871973 | AGAGCTGTCATATCAAATCATACAGTC | 59.128 | 37.037 | 0.00 | 0.00 | 36.20 | 3.51 |
164 | 165 | 7.733969 | AGAGCTGTCATATCAAATCATACAGT | 58.266 | 34.615 | 0.00 | 0.00 | 36.20 | 3.55 |
165 | 166 | 8.089597 | AGAGAGCTGTCATATCAAATCATACAG | 58.910 | 37.037 | 14.08 | 0.00 | 36.74 | 2.74 |
166 | 167 | 7.871463 | CAGAGAGCTGTCATATCAAATCATACA | 59.129 | 37.037 | 14.08 | 0.00 | 37.37 | 2.29 |
167 | 168 | 7.148606 | GCAGAGAGCTGTCATATCAAATCATAC | 60.149 | 40.741 | 14.08 | 0.00 | 44.17 | 2.39 |
168 | 169 | 6.872547 | GCAGAGAGCTGTCATATCAAATCATA | 59.127 | 38.462 | 14.08 | 0.00 | 44.17 | 2.15 |
169 | 170 | 5.701750 | GCAGAGAGCTGTCATATCAAATCAT | 59.298 | 40.000 | 14.08 | 0.00 | 44.17 | 2.45 |
170 | 171 | 5.055144 | GCAGAGAGCTGTCATATCAAATCA | 58.945 | 41.667 | 14.08 | 0.00 | 44.17 | 2.57 |
171 | 172 | 4.451774 | GGCAGAGAGCTGTCATATCAAATC | 59.548 | 45.833 | 14.08 | 0.00 | 46.01 | 2.17 |
172 | 173 | 4.387598 | GGCAGAGAGCTGTCATATCAAAT | 58.612 | 43.478 | 14.08 | 0.00 | 46.01 | 2.32 |
173 | 174 | 3.801698 | GGCAGAGAGCTGTCATATCAAA | 58.198 | 45.455 | 14.08 | 0.00 | 46.01 | 2.69 |
174 | 175 | 3.465742 | GGCAGAGAGCTGTCATATCAA | 57.534 | 47.619 | 14.08 | 0.00 | 46.01 | 2.57 |
184 | 185 | 2.546795 | CGATAATTTCCGGCAGAGAGCT | 60.547 | 50.000 | 0.00 | 0.00 | 44.79 | 4.09 |
185 | 186 | 1.795286 | CGATAATTTCCGGCAGAGAGC | 59.205 | 52.381 | 0.00 | 0.00 | 44.65 | 4.09 |
186 | 187 | 2.797156 | CACGATAATTTCCGGCAGAGAG | 59.203 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
187 | 188 | 2.483013 | CCACGATAATTTCCGGCAGAGA | 60.483 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
188 | 189 | 1.867233 | CCACGATAATTTCCGGCAGAG | 59.133 | 52.381 | 0.00 | 0.00 | 0.00 | 3.35 |
189 | 190 | 1.483004 | TCCACGATAATTTCCGGCAGA | 59.517 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
190 | 191 | 1.597663 | GTCCACGATAATTTCCGGCAG | 59.402 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
191 | 192 | 1.658994 | GTCCACGATAATTTCCGGCA | 58.341 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
192 | 193 | 0.580104 | CGTCCACGATAATTTCCGGC | 59.420 | 55.000 | 0.00 | 0.00 | 43.02 | 6.13 |
193 | 194 | 0.580104 | GCGTCCACGATAATTTCCGG | 59.420 | 55.000 | 2.58 | 0.00 | 43.02 | 5.14 |
194 | 195 | 1.257936 | CTGCGTCCACGATAATTTCCG | 59.742 | 52.381 | 2.58 | 0.00 | 43.02 | 4.30 |
195 | 196 | 1.597663 | CCTGCGTCCACGATAATTTCC | 59.402 | 52.381 | 2.58 | 0.00 | 43.02 | 3.13 |
196 | 197 | 1.597663 | CCCTGCGTCCACGATAATTTC | 59.402 | 52.381 | 2.58 | 0.00 | 43.02 | 2.17 |
197 | 198 | 1.663695 | CCCTGCGTCCACGATAATTT | 58.336 | 50.000 | 2.58 | 0.00 | 43.02 | 1.82 |
198 | 199 | 0.179056 | CCCCTGCGTCCACGATAATT | 60.179 | 55.000 | 2.58 | 0.00 | 43.02 | 1.40 |
199 | 200 | 1.335132 | ACCCCTGCGTCCACGATAAT | 61.335 | 55.000 | 2.58 | 0.00 | 43.02 | 1.28 |
200 | 201 | 1.546589 | AACCCCTGCGTCCACGATAA | 61.547 | 55.000 | 2.58 | 0.00 | 43.02 | 1.75 |
201 | 202 | 1.546589 | AAACCCCTGCGTCCACGATA | 61.547 | 55.000 | 2.58 | 0.00 | 43.02 | 2.92 |
202 | 203 | 2.406002 | AAAACCCCTGCGTCCACGAT | 62.406 | 55.000 | 2.58 | 0.00 | 43.02 | 3.73 |
203 | 204 | 1.756408 | TAAAACCCCTGCGTCCACGA | 61.756 | 55.000 | 2.58 | 0.00 | 43.02 | 4.35 |
204 | 205 | 1.296056 | CTAAAACCCCTGCGTCCACG | 61.296 | 60.000 | 0.00 | 0.00 | 43.27 | 4.94 |
205 | 206 | 0.250597 | ACTAAAACCCCTGCGTCCAC | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
206 | 207 | 0.250553 | CACTAAAACCCCTGCGTCCA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
207 | 208 | 0.035739 | TCACTAAAACCCCTGCGTCC | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
208 | 209 | 1.270678 | ACTCACTAAAACCCCTGCGTC | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
209 | 210 | 0.763035 | ACTCACTAAAACCCCTGCGT | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
210 | 211 | 1.156736 | CACTCACTAAAACCCCTGCG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
211 | 212 | 2.427506 | CTCACTCACTAAAACCCCTGC | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
212 | 213 | 2.427506 | GCTCACTCACTAAAACCCCTG | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
213 | 214 | 1.002087 | CGCTCACTCACTAAAACCCCT | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
214 | 215 | 1.001633 | TCGCTCACTCACTAAAACCCC | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 4.95 |
215 | 216 | 2.288886 | ACTCGCTCACTCACTAAAACCC | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
216 | 217 | 2.731976 | CACTCGCTCACTCACTAAAACC | 59.268 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
217 | 218 | 2.731976 | CCACTCGCTCACTCACTAAAAC | 59.268 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
218 | 219 | 2.288825 | CCCACTCGCTCACTCACTAAAA | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
219 | 220 | 1.272490 | CCCACTCGCTCACTCACTAAA | 59.728 | 52.381 | 0.00 | 0.00 | 0.00 | 1.85 |
220 | 221 | 0.888619 | CCCACTCGCTCACTCACTAA | 59.111 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
221 | 222 | 0.965866 | CCCCACTCGCTCACTCACTA | 60.966 | 60.000 | 0.00 | 0.00 | 0.00 | 2.74 |
222 | 223 | 2.279069 | CCCCACTCGCTCACTCACT | 61.279 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
223 | 224 | 2.262915 | CCCCACTCGCTCACTCAC | 59.737 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
224 | 225 | 2.997315 | CCCCCACTCGCTCACTCA | 60.997 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
225 | 226 | 2.232298 | CTTCCCCCACTCGCTCACTC | 62.232 | 65.000 | 0.00 | 0.00 | 0.00 | 3.51 |
226 | 227 | 2.203788 | TTCCCCCACTCGCTCACT | 60.204 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
227 | 228 | 2.266055 | CTTCCCCCACTCGCTCAC | 59.734 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
228 | 229 | 2.119611 | TCTTCCCCCACTCGCTCA | 59.880 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
229 | 230 | 0.683504 | TAGTCTTCCCCCACTCGCTC | 60.684 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
230 | 231 | 0.252103 | TTAGTCTTCCCCCACTCGCT | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
231 | 232 | 0.175989 | CTTAGTCTTCCCCCACTCGC | 59.824 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
232 | 233 | 1.848652 | TCTTAGTCTTCCCCCACTCG | 58.151 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
233 | 234 | 3.442076 | TCTTCTTAGTCTTCCCCCACTC | 58.558 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
234 | 235 | 3.562108 | TCTTCTTAGTCTTCCCCCACT | 57.438 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
235 | 236 | 5.163290 | CCTTATCTTCTTAGTCTTCCCCCAC | 60.163 | 48.000 | 0.00 | 0.00 | 0.00 | 4.61 |
236 | 237 | 4.969359 | CCTTATCTTCTTAGTCTTCCCCCA | 59.031 | 45.833 | 0.00 | 0.00 | 0.00 | 4.96 |
237 | 238 | 4.348461 | CCCTTATCTTCTTAGTCTTCCCCC | 59.652 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
238 | 239 | 5.217400 | TCCCTTATCTTCTTAGTCTTCCCC | 58.783 | 45.833 | 0.00 | 0.00 | 0.00 | 4.81 |
239 | 240 | 6.384595 | ACTTCCCTTATCTTCTTAGTCTTCCC | 59.615 | 42.308 | 0.00 | 0.00 | 0.00 | 3.97 |
240 | 241 | 7.426606 | ACTTCCCTTATCTTCTTAGTCTTCC | 57.573 | 40.000 | 0.00 | 0.00 | 0.00 | 3.46 |
244 | 245 | 7.564292 | TCCCTTACTTCCCTTATCTTCTTAGTC | 59.436 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
279 | 281 | 2.350895 | CCAACCAGGCATCCGTGA | 59.649 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
282 | 284 | 2.438434 | GTCCCAACCAGGCATCCG | 60.438 | 66.667 | 0.00 | 0.00 | 35.39 | 4.18 |
297 | 299 | 5.854157 | TGATAGATTTCAAAAGCGTTCGTC | 58.146 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
346 | 348 | 2.125952 | CGTCAGATGGAGCGCACA | 60.126 | 61.111 | 11.47 | 9.05 | 0.00 | 4.57 |
398 | 401 | 9.539825 | GATCGATATGCCTTAATCTGATGTTAT | 57.460 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
417 | 420 | 3.243873 | GGCTGGAACATGAGTGATCGATA | 60.244 | 47.826 | 0.00 | 0.00 | 38.20 | 2.92 |
590 | 770 | 1.215423 | ACATTGCATTAGGAGACCCCC | 59.785 | 52.381 | 0.00 | 0.00 | 34.66 | 5.40 |
591 | 771 | 2.736670 | ACATTGCATTAGGAGACCCC | 57.263 | 50.000 | 0.00 | 0.00 | 0.00 | 4.95 |
884 | 1690 | 2.432628 | CGTCTGACGGGTGCCTTC | 60.433 | 66.667 | 21.78 | 0.00 | 38.08 | 3.46 |
910 | 1716 | 4.664677 | GCGCCGGTGAGTGACTGT | 62.665 | 66.667 | 21.76 | 0.00 | 0.00 | 3.55 |
978 | 1784 | 1.069358 | GCTACCTAGCCGATCTGCTTT | 59.931 | 52.381 | 17.22 | 5.07 | 43.39 | 3.51 |
1084 | 1900 | 0.179004 | TCGCCCAATGTTGTGTTCCT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1210 | 2026 | 7.045725 | TCTTAACATCAAATTTCTCGTCGTC | 57.954 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1220 | 2036 | 8.827832 | TCAATCCCTCATCTTAACATCAAATT | 57.172 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
1227 | 2043 | 3.523157 | TGGCTCAATCCCTCATCTTAACA | 59.477 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
1229 | 2045 | 5.103982 | TCAATGGCTCAATCCCTCATCTTAA | 60.104 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
1280 | 2102 | 3.808218 | AAACGCCCAGCACCCATGT | 62.808 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
1351 | 2194 | 7.441836 | ACATGATCGTTCCAATATAAGTGCTA | 58.558 | 34.615 | 0.00 | 0.00 | 0.00 | 3.49 |
1456 | 2639 | 7.934855 | AGATTTTGCATTACTGATGAAGTCT | 57.065 | 32.000 | 0.00 | 0.00 | 40.56 | 3.24 |
1515 | 3016 | 7.148918 | CGTCTTGAGAAAAATATGGCAGTTTTG | 60.149 | 37.037 | 12.34 | 2.37 | 34.71 | 2.44 |
1594 | 3176 | 3.198872 | GGAGTAGAAGAGAAAATGGCGG | 58.801 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1625 | 3225 | 7.341769 | TGGGTCAGGATTAAATAAACCAGATTG | 59.658 | 37.037 | 2.81 | 0.00 | 29.24 | 2.67 |
1626 | 3226 | 7.418378 | TGGGTCAGGATTAAATAAACCAGATT | 58.582 | 34.615 | 2.81 | 0.00 | 29.24 | 2.40 |
1632 | 3232 | 8.463930 | TCATCATGGGTCAGGATTAAATAAAC | 57.536 | 34.615 | 0.00 | 0.00 | 32.38 | 2.01 |
1743 | 3352 | 1.377202 | AGGGTAGCGTTCGGTCGTA | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 3.43 |
1745 | 3354 | 1.647545 | TACAGGGTAGCGTTCGGTCG | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1746 | 3355 | 0.527565 | TTACAGGGTAGCGTTCGGTC | 59.472 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1776 | 3824 | 6.854381 | GCAAAGCCTTCATGAAATTTTGAAAG | 59.146 | 34.615 | 26.69 | 9.58 | 31.85 | 2.62 |
1778 | 3826 | 5.239087 | GGCAAAGCCTTCATGAAATTTTGAA | 59.761 | 36.000 | 26.69 | 5.44 | 46.69 | 2.69 |
1779 | 3827 | 4.756135 | GGCAAAGCCTTCATGAAATTTTGA | 59.244 | 37.500 | 26.69 | 2.94 | 46.69 | 2.69 |
1802 | 3850 | 1.153489 | CTGGGTCAGCATCACCGAG | 60.153 | 63.158 | 0.00 | 0.00 | 33.92 | 4.63 |
1829 | 4066 | 9.988815 | CTAGCACTAACTTGTTTCCTGATATAT | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
1830 | 4067 | 9.197306 | TCTAGCACTAACTTGTTTCCTGATATA | 57.803 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
1831 | 4068 | 8.079211 | TCTAGCACTAACTTGTTTCCTGATAT | 57.921 | 34.615 | 0.00 | 0.00 | 0.00 | 1.63 |
1862 | 5221 | 2.296471 | ACAACCCAACTCTAGTGACTCG | 59.704 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1971 | 5338 | 8.099364 | ACAAAGACACAATTGTTAGGATAGTG | 57.901 | 34.615 | 8.77 | 2.93 | 36.39 | 2.74 |
1988 | 5369 | 6.071391 | AGCTGAAAGAAAGGAAAACAAAGACA | 60.071 | 34.615 | 0.00 | 0.00 | 34.07 | 3.41 |
2006 | 5387 | 2.490509 | CTGACCAATGCATCAGCTGAAA | 59.509 | 45.455 | 22.50 | 10.09 | 42.74 | 2.69 |
2027 | 5408 | 2.690778 | AATTTCGCGAGGCCAGTGC | 61.691 | 57.895 | 9.59 | 4.37 | 0.00 | 4.40 |
2092 | 5473 | 7.296856 | TGTCCAACATGTCATGGGAAATATAT | 58.703 | 34.615 | 17.08 | 0.00 | 37.31 | 0.86 |
2142 | 5528 | 9.965824 | GGGAAACATATTGGAGTAAAACATATG | 57.034 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
2156 | 5542 | 7.829725 | TGAAACAAGAGATGGGAAACATATTG | 58.170 | 34.615 | 0.00 | 0.00 | 40.72 | 1.90 |
2221 | 5607 | 4.755411 | TGGTTAGCTCAAGTTTATCTCCG | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
2488 | 5927 | 2.042686 | AATCTGCAAGCGCCTTGATA | 57.957 | 45.000 | 19.38 | 9.17 | 43.42 | 2.15 |
2600 | 6039 | 5.299279 | CCTACAGTTTTTCCACACAGTGATT | 59.701 | 40.000 | 7.81 | 0.00 | 35.23 | 2.57 |
2606 | 6045 | 4.141287 | CCATCCTACAGTTTTTCCACACA | 58.859 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
2607 | 6046 | 3.057526 | GCCATCCTACAGTTTTTCCACAC | 60.058 | 47.826 | 0.00 | 0.00 | 0.00 | 3.82 |
2618 | 6057 | 7.283127 | ACAACACAAATATTAGCCATCCTACAG | 59.717 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
2639 | 6081 | 9.325198 | GGTCAGATCAATACAATATACACAACA | 57.675 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
2640 | 6082 | 8.774586 | GGGTCAGATCAATACAATATACACAAC | 58.225 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
2645 | 6089 | 7.680730 | ACCAGGGTCAGATCAATACAATATAC | 58.319 | 38.462 | 0.00 | 0.00 | 0.00 | 1.47 |
2836 | 6295 | 5.650543 | ACGAAAGCACAAGAGTTCAAATTT | 58.349 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3046 | 6510 | 3.766151 | TCGACATTAAAGGCTACGTCTG | 58.234 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
3180 | 6665 | 1.217511 | CGTCCACATCTGCAGCTCT | 59.782 | 57.895 | 9.47 | 0.00 | 0.00 | 4.09 |
3191 | 6676 | 1.965930 | GCAAGGTGCATCGTCCACA | 60.966 | 57.895 | 0.00 | 0.00 | 44.26 | 4.17 |
3735 | 7565 | 4.190001 | GGCTATGGATCTACATCTGCATG | 58.810 | 47.826 | 0.00 | 0.00 | 34.36 | 4.06 |
3894 | 7724 | 1.923204 | GATGTGTGACTCATGCGAGAC | 59.077 | 52.381 | 4.71 | 0.00 | 42.34 | 3.36 |
3895 | 7725 | 1.545582 | TGATGTGTGACTCATGCGAGA | 59.454 | 47.619 | 4.71 | 0.00 | 42.34 | 4.04 |
4094 | 8001 | 0.036388 | CCAGGTACGTCCATGCACTT | 60.036 | 55.000 | 0.00 | 0.00 | 39.02 | 3.16 |
4552 | 8945 | 2.196304 | AATCTCCTCTTCCCGGGGGT | 62.196 | 60.000 | 23.50 | 0.00 | 36.47 | 4.95 |
4661 | 9057 | 6.900194 | ACACAAATATTAGCCATCCTACAGT | 58.100 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4686 | 9083 | 8.262601 | AGGGTCAGATCAATACAATATACACA | 57.737 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
4687 | 9084 | 8.367911 | TGAGGGTCAGATCAATACAATATACAC | 58.632 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
4693 | 9099 | 7.400439 | CCATATGAGGGTCAGATCAATACAAT | 58.600 | 38.462 | 3.65 | 0.00 | 0.00 | 2.71 |
4752 | 9163 | 4.512944 | CACATGTAACTTGTCTTGCACTCT | 59.487 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
4839 | 9250 | 8.989980 | GTTAATGAAGAGTTTACTTGCTACAGT | 58.010 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
5163 | 9617 | 0.691332 | GTTCTCCGGACCTTTCCCTT | 59.309 | 55.000 | 0.00 | 0.00 | 38.99 | 3.95 |
5510 | 9976 | 3.593442 | TGACCAAAATCCCAGAGTTGT | 57.407 | 42.857 | 0.00 | 0.00 | 0.00 | 3.32 |
5701 | 10216 | 5.812642 | ACATTGTCTATCGATCAGTTCCAAC | 59.187 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
5702 | 10217 | 5.977635 | ACATTGTCTATCGATCAGTTCCAA | 58.022 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
5703 | 10218 | 5.598416 | ACATTGTCTATCGATCAGTTCCA | 57.402 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
5704 | 10219 | 6.276847 | AGAACATTGTCTATCGATCAGTTCC | 58.723 | 40.000 | 0.00 | 0.00 | 34.87 | 3.62 |
5705 | 10220 | 6.419413 | GGAGAACATTGTCTATCGATCAGTTC | 59.581 | 42.308 | 0.00 | 5.53 | 34.61 | 3.01 |
5706 | 10221 | 6.097554 | AGGAGAACATTGTCTATCGATCAGTT | 59.902 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
5707 | 10222 | 5.596361 | AGGAGAACATTGTCTATCGATCAGT | 59.404 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5862 | 10401 | 0.313672 | GTTGCGGTGAGGAAATGCAA | 59.686 | 50.000 | 0.00 | 0.00 | 42.68 | 4.08 |
5952 | 10492 | 2.744202 | CCTCCGTATTGCTGATTATGGC | 59.256 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5999 | 10539 | 1.136611 | GCGCAAACACGTGTAAGAGAG | 60.137 | 52.381 | 23.69 | 14.18 | 34.88 | 3.20 |
6012 | 10552 | 4.722194 | TGAAGAAGTTATCATGCGCAAAC | 58.278 | 39.130 | 17.11 | 14.89 | 0.00 | 2.93 |
6063 | 10605 | 6.459710 | CGCCTAGTCTATCTGTTCATACAACA | 60.460 | 42.308 | 0.00 | 0.00 | 32.92 | 3.33 |
6132 | 10675 | 6.878923 | CCACTGGTAAGATATTTGAACTGACA | 59.121 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
6152 | 10695 | 2.704464 | TCTCATGATGGAAGCCACTG | 57.296 | 50.000 | 0.00 | 0.00 | 35.80 | 3.66 |
6326 | 10872 | 1.583495 | CCCATAGATCGCGAGCGGTA | 61.583 | 60.000 | 19.77 | 7.30 | 40.25 | 4.02 |
6357 | 10903 | 1.609208 | GCACTGGGCTCTGAAGAAAA | 58.391 | 50.000 | 0.00 | 0.00 | 40.25 | 2.29 |
6408 | 10954 | 8.636213 | AGACAGAAGTTTTTGTGATGATGAAAT | 58.364 | 29.630 | 0.00 | 0.00 | 32.28 | 2.17 |
6520 | 11067 | 2.894763 | TGCGTGTACAGTTACTTGGT | 57.105 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
6534 | 11081 | 0.247419 | CGACTTGCTATGCTTGCGTG | 60.247 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
6570 | 11117 | 4.749048 | ATCCTTTCTTCCAAACCCTTCT | 57.251 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
6581 | 11129 | 9.461312 | TCTGCTCTATCTATCTATCCTTTCTTC | 57.539 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
6585 | 11133 | 9.412460 | CATCTCTGCTCTATCTATCTATCCTTT | 57.588 | 37.037 | 0.00 | 0.00 | 0.00 | 3.11 |
6592 | 11140 | 6.012596 | TCACCTCATCTCTGCTCTATCTATCT | 60.013 | 42.308 | 0.00 | 0.00 | 0.00 | 1.98 |
6593 | 11141 | 6.179756 | TCACCTCATCTCTGCTCTATCTATC | 58.820 | 44.000 | 0.00 | 0.00 | 0.00 | 2.08 |
6594 | 11142 | 6.138391 | TCACCTCATCTCTGCTCTATCTAT | 57.862 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
6595 | 11143 | 5.574970 | TCACCTCATCTCTGCTCTATCTA | 57.425 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
6605 | 11153 | 5.427806 | TCATTCCTCAATTCACCTCATCTCT | 59.572 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
6629 | 11177 | 8.958119 | ATGTCTAACGTCATATAACCAAATGT | 57.042 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
6675 | 11224 | 0.309302 | CACCGACATTTTCACCGCAA | 59.691 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6679 | 11228 | 0.309612 | AACGCACCGACATTTTCACC | 59.690 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6770 | 11325 | 3.007182 | ACAAGTATTTTCGAACGGAGGGA | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
6771 | 11326 | 3.332034 | ACAAGTATTTTCGAACGGAGGG | 58.668 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
6772 | 11327 | 3.991773 | TGACAAGTATTTTCGAACGGAGG | 59.008 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
6773 | 11328 | 5.347635 | TGATGACAAGTATTTTCGAACGGAG | 59.652 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
6774 | 11329 | 5.231702 | TGATGACAAGTATTTTCGAACGGA | 58.768 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
6775 | 11330 | 5.524511 | TGATGACAAGTATTTTCGAACGG | 57.475 | 39.130 | 0.00 | 0.00 | 0.00 | 4.44 |
6776 | 11331 | 7.830217 | TTTTGATGACAAGTATTTTCGAACG | 57.170 | 32.000 | 0.00 | 0.00 | 37.32 | 3.95 |
6777 | 11332 | 8.638565 | CCATTTTGATGACAAGTATTTTCGAAC | 58.361 | 33.333 | 0.00 | 0.00 | 37.32 | 3.95 |
6778 | 11333 | 8.572185 | TCCATTTTGATGACAAGTATTTTCGAA | 58.428 | 29.630 | 0.00 | 0.00 | 37.32 | 3.71 |
6779 | 11334 | 8.020819 | GTCCATTTTGATGACAAGTATTTTCGA | 58.979 | 33.333 | 0.00 | 0.00 | 37.32 | 3.71 |
6780 | 11335 | 7.807433 | TGTCCATTTTGATGACAAGTATTTTCG | 59.193 | 33.333 | 0.00 | 0.00 | 37.32 | 3.46 |
6781 | 11336 | 9.474920 | TTGTCCATTTTGATGACAAGTATTTTC | 57.525 | 29.630 | 0.00 | 0.00 | 37.32 | 2.29 |
6782 | 11337 | 9.829507 | TTTGTCCATTTTGATGACAAGTATTTT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.82 |
6783 | 11338 | 9.829507 | TTTTGTCCATTTTGATGACAAGTATTT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.40 |
6784 | 11339 | 9.829507 | TTTTTGTCCATTTTGATGACAAGTATT | 57.170 | 25.926 | 0.00 | 0.00 | 37.13 | 1.89 |
6785 | 11340 | 9.480053 | CTTTTTGTCCATTTTGATGACAAGTAT | 57.520 | 29.630 | 0.00 | 0.00 | 37.13 | 2.12 |
6786 | 11341 | 8.690884 | TCTTTTTGTCCATTTTGATGACAAGTA | 58.309 | 29.630 | 0.00 | 0.00 | 37.13 | 2.24 |
6787 | 11342 | 7.555087 | TCTTTTTGTCCATTTTGATGACAAGT | 58.445 | 30.769 | 0.00 | 0.00 | 37.13 | 3.16 |
6788 | 11343 | 7.922278 | TCTCTTTTTGTCCATTTTGATGACAAG | 59.078 | 33.333 | 0.00 | 0.00 | 37.13 | 3.16 |
6789 | 11344 | 7.780064 | TCTCTTTTTGTCCATTTTGATGACAA | 58.220 | 30.769 | 0.00 | 0.00 | 34.47 | 3.18 |
6790 | 11345 | 7.345422 | TCTCTTTTTGTCCATTTTGATGACA | 57.655 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
6847 | 11402 | 9.918630 | ACTTGTCATCAAAATGAATAAAAGGAG | 57.081 | 29.630 | 0.00 | 0.00 | 43.42 | 3.69 |
6855 | 11410 | 7.975616 | CCGGAAATACTTGTCATCAAAATGAAT | 59.024 | 33.333 | 0.00 | 0.00 | 43.42 | 2.57 |
6856 | 11411 | 7.175816 | TCCGGAAATACTTGTCATCAAAATGAA | 59.824 | 33.333 | 0.00 | 0.00 | 43.42 | 2.57 |
6857 | 11412 | 6.657117 | TCCGGAAATACTTGTCATCAAAATGA | 59.343 | 34.615 | 0.00 | 0.00 | 39.63 | 2.57 |
6858 | 11413 | 6.747280 | GTCCGGAAATACTTGTCATCAAAATG | 59.253 | 38.462 | 5.23 | 0.00 | 32.87 | 2.32 |
6859 | 11414 | 6.403200 | CGTCCGGAAATACTTGTCATCAAAAT | 60.403 | 38.462 | 5.23 | 0.00 | 32.87 | 1.82 |
6860 | 11415 | 5.106869 | CGTCCGGAAATACTTGTCATCAAAA | 60.107 | 40.000 | 5.23 | 0.00 | 32.87 | 2.44 |
6861 | 11416 | 4.390603 | CGTCCGGAAATACTTGTCATCAAA | 59.609 | 41.667 | 5.23 | 0.00 | 32.87 | 2.69 |
6862 | 11417 | 3.930229 | CGTCCGGAAATACTTGTCATCAA | 59.070 | 43.478 | 5.23 | 0.00 | 0.00 | 2.57 |
6863 | 11418 | 3.517602 | CGTCCGGAAATACTTGTCATCA | 58.482 | 45.455 | 5.23 | 0.00 | 0.00 | 3.07 |
6864 | 11419 | 2.864343 | CCGTCCGGAAATACTTGTCATC | 59.136 | 50.000 | 5.23 | 0.00 | 37.50 | 2.92 |
6865 | 11420 | 2.498481 | TCCGTCCGGAAATACTTGTCAT | 59.502 | 45.455 | 5.23 | 0.00 | 42.05 | 3.06 |
6866 | 11421 | 1.894466 | TCCGTCCGGAAATACTTGTCA | 59.106 | 47.619 | 5.23 | 0.00 | 42.05 | 3.58 |
6867 | 11422 | 2.537401 | CTCCGTCCGGAAATACTTGTC | 58.463 | 52.381 | 5.23 | 0.00 | 44.66 | 3.18 |
6868 | 11423 | 1.206371 | CCTCCGTCCGGAAATACTTGT | 59.794 | 52.381 | 5.23 | 0.00 | 44.66 | 3.16 |
6869 | 11424 | 1.472728 | CCCTCCGTCCGGAAATACTTG | 60.473 | 57.143 | 5.23 | 0.00 | 44.66 | 3.16 |
6870 | 11425 | 0.828677 | CCCTCCGTCCGGAAATACTT | 59.171 | 55.000 | 5.23 | 0.00 | 44.66 | 2.24 |
6871 | 11426 | 0.032813 | TCCCTCCGTCCGGAAATACT | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 2.12 |
6872 | 11427 | 0.388294 | CTCCCTCCGTCCGGAAATAC | 59.612 | 60.000 | 5.23 | 0.00 | 44.66 | 1.89 |
6873 | 11428 | 0.032813 | ACTCCCTCCGTCCGGAAATA | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 1.40 |
6874 | 11429 | 0.032813 | TACTCCCTCCGTCCGGAAAT | 60.033 | 55.000 | 5.23 | 0.00 | 44.66 | 2.17 |
6875 | 11430 | 0.967380 | GTACTCCCTCCGTCCGGAAA | 60.967 | 60.000 | 5.23 | 0.00 | 44.66 | 3.13 |
6876 | 11431 | 1.379044 | GTACTCCCTCCGTCCGGAA | 60.379 | 63.158 | 5.23 | 0.00 | 44.66 | 4.30 |
6877 | 11432 | 1.929860 | ATGTACTCCCTCCGTCCGGA | 61.930 | 60.000 | 0.00 | 0.00 | 42.90 | 5.14 |
6878 | 11433 | 1.041447 | AATGTACTCCCTCCGTCCGG | 61.041 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
6879 | 11434 | 0.102481 | CAATGTACTCCCTCCGTCCG | 59.898 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6880 | 11435 | 1.409427 | CTCAATGTACTCCCTCCGTCC | 59.591 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
6881 | 11436 | 1.409427 | CCTCAATGTACTCCCTCCGTC | 59.591 | 57.143 | 0.00 | 0.00 | 0.00 | 4.79 |
6882 | 11437 | 1.273098 | ACCTCAATGTACTCCCTCCGT | 60.273 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
6883 | 11438 | 1.486211 | ACCTCAATGTACTCCCTCCG | 58.514 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
6884 | 11439 | 3.519913 | AGAAACCTCAATGTACTCCCTCC | 59.480 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
6885 | 11440 | 4.383226 | GGAGAAACCTCAATGTACTCCCTC | 60.383 | 50.000 | 0.00 | 0.00 | 36.66 | 4.30 |
6886 | 11441 | 3.519913 | GGAGAAACCTCAATGTACTCCCT | 59.480 | 47.826 | 0.00 | 0.00 | 36.66 | 4.20 |
6887 | 11442 | 3.370633 | GGGAGAAACCTCAATGTACTCCC | 60.371 | 52.174 | 12.51 | 12.51 | 45.66 | 4.30 |
6888 | 11443 | 3.519913 | AGGGAGAAACCTCAATGTACTCC | 59.480 | 47.826 | 0.00 | 0.00 | 35.43 | 3.85 |
6889 | 11444 | 4.223032 | TCAGGGAGAAACCTCAATGTACTC | 59.777 | 45.833 | 0.00 | 0.00 | 39.34 | 2.59 |
6890 | 11445 | 4.168101 | TCAGGGAGAAACCTCAATGTACT | 58.832 | 43.478 | 0.00 | 0.00 | 39.34 | 2.73 |
6891 | 11446 | 4.553330 | TCAGGGAGAAACCTCAATGTAC | 57.447 | 45.455 | 0.00 | 0.00 | 39.34 | 2.90 |
6892 | 11447 | 5.576563 | TTTCAGGGAGAAACCTCAATGTA | 57.423 | 39.130 | 0.00 | 0.00 | 41.17 | 2.29 |
6893 | 11448 | 4.453480 | TTTCAGGGAGAAACCTCAATGT | 57.547 | 40.909 | 0.00 | 0.00 | 41.17 | 2.71 |
7133 | 11711 | 2.747446 | ACTTACTAGCCCATGTTTTGCG | 59.253 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
7140 | 11718 | 3.609853 | TCAGCAAACTTACTAGCCCATG | 58.390 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
7182 | 11760 | 5.585844 | GGGTAGCTATGTTTTAACCGCTTTA | 59.414 | 40.000 | 0.00 | 0.00 | 31.53 | 1.85 |
7187 | 11765 | 6.445357 | AATTGGGTAGCTATGTTTTAACCG | 57.555 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
7220 | 11804 | 1.618837 | TCTCTCTGTTGTGGCACCTAC | 59.381 | 52.381 | 16.26 | 13.58 | 0.00 | 3.18 |
7240 | 11824 | 1.278985 | TGGAATTCTCGCCACAGTGAT | 59.721 | 47.619 | 0.62 | 0.00 | 0.00 | 3.06 |
7280 | 11864 | 5.299949 | TCATGTGATATTGGAGACCGATTG | 58.700 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
7282 | 11866 | 4.590647 | ACTCATGTGATATTGGAGACCGAT | 59.409 | 41.667 | 0.94 | 0.00 | 0.00 | 4.18 |
7293 | 11877 | 4.652881 | TGAGAGGCTCAACTCATGTGATAT | 59.347 | 41.667 | 18.26 | 0.00 | 37.57 | 1.63 |
7297 | 11881 | 2.756840 | TGAGAGGCTCAACTCATGTG | 57.243 | 50.000 | 18.26 | 0.00 | 37.57 | 3.21 |
7309 | 11893 | 6.089954 | GTGTTCTTTTTGCAAATATGAGAGGC | 59.910 | 38.462 | 13.65 | 10.71 | 0.00 | 4.70 |
7310 | 11894 | 6.587608 | GGTGTTCTTTTTGCAAATATGAGAGG | 59.412 | 38.462 | 13.65 | 0.00 | 0.00 | 3.69 |
7317 | 11901 | 6.038825 | TCGAGAAGGTGTTCTTTTTGCAAATA | 59.961 | 34.615 | 13.65 | 7.47 | 43.50 | 1.40 |
7323 | 11907 | 5.064707 | TCACTTCGAGAAGGTGTTCTTTTTG | 59.935 | 40.000 | 16.16 | 2.95 | 43.50 | 2.44 |
7335 | 11919 | 2.670414 | GAGGCATTGTCACTTCGAGAAG | 59.330 | 50.000 | 10.97 | 10.97 | 43.79 | 2.85 |
7340 | 11924 | 3.785486 | TCATAGAGGCATTGTCACTTCG | 58.215 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
7355 | 11939 | 0.268869 | ACTGGCCCCCTCATCATAGA | 59.731 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
7357 | 11941 | 0.030195 | TGACTGGCCCCCTCATCATA | 60.030 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
7369 | 11953 | 1.271926 | ACCACATTAAGGGTGACTGGC | 60.272 | 52.381 | 10.69 | 0.00 | 38.54 | 4.85 |
7370 | 11954 | 2.879103 | ACCACATTAAGGGTGACTGG | 57.121 | 50.000 | 10.69 | 2.50 | 38.54 | 4.00 |
7395 | 11980 | 3.009723 | GACATGCTTGCTAGGTGCTTAA | 58.990 | 45.455 | 0.00 | 0.00 | 43.37 | 1.85 |
7396 | 11981 | 2.632377 | GACATGCTTGCTAGGTGCTTA | 58.368 | 47.619 | 0.00 | 0.00 | 43.37 | 3.09 |
7399 | 11984 | 0.740868 | TCGACATGCTTGCTAGGTGC | 60.741 | 55.000 | 0.00 | 0.00 | 43.25 | 5.01 |
7404 | 11989 | 1.575244 | GCTCATCGACATGCTTGCTA | 58.425 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
7412 | 11997 | 2.398498 | GTATTGCTCGCTCATCGACAT | 58.602 | 47.619 | 0.00 | 0.00 | 43.16 | 3.06 |
7414 | 11999 | 1.132588 | GGTATTGCTCGCTCATCGAC | 58.867 | 55.000 | 0.00 | 0.00 | 43.16 | 4.20 |
7424 | 12009 | 2.893682 | AAGGGGCTGCGGTATTGCTC | 62.894 | 60.000 | 0.00 | 0.00 | 35.36 | 4.26 |
7427 | 12012 | 1.823899 | GGAAGGGGCTGCGGTATTG | 60.824 | 63.158 | 0.00 | 0.00 | 0.00 | 1.90 |
7428 | 12013 | 1.571773 | AAGGAAGGGGCTGCGGTATT | 61.572 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
7429 | 12014 | 1.984288 | GAAGGAAGGGGCTGCGGTAT | 61.984 | 60.000 | 0.00 | 0.00 | 0.00 | 2.73 |
7430 | 12015 | 2.609610 | AAGGAAGGGGCTGCGGTA | 60.610 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
7432 | 12017 | 4.803908 | GGAAGGAAGGGGCTGCGG | 62.804 | 72.222 | 0.00 | 0.00 | 0.00 | 5.69 |
7434 | 12019 | 3.651980 | CTGGGAAGGAAGGGGCTGC | 62.652 | 68.421 | 0.00 | 0.00 | 0.00 | 5.25 |
7440 | 12025 | 1.555075 | TCACGATTCTGGGAAGGAAGG | 59.445 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
7441 | 12026 | 2.234908 | AGTCACGATTCTGGGAAGGAAG | 59.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
7443 | 12028 | 1.938585 | AGTCACGATTCTGGGAAGGA | 58.061 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7447 | 12032 | 2.158957 | GCCATTAGTCACGATTCTGGGA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
7449 | 12034 | 2.609459 | GTGCCATTAGTCACGATTCTGG | 59.391 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
7455 | 12040 | 1.831106 | AGATGGTGCCATTAGTCACGA | 59.169 | 47.619 | 5.08 | 0.00 | 36.70 | 4.35 |
7459 | 12044 | 5.368145 | TCAATGTAGATGGTGCCATTAGTC | 58.632 | 41.667 | 5.08 | 0.00 | 36.70 | 2.59 |
7466 | 12051 | 6.712095 | TCATAAAGATCAATGTAGATGGTGCC | 59.288 | 38.462 | 0.00 | 0.00 | 0.00 | 5.01 |
7508 | 12093 | 0.186386 | AACCCGGACATGGTTGGAAA | 59.814 | 50.000 | 0.73 | 0.00 | 44.30 | 3.13 |
7509 | 12094 | 1.065647 | TAACCCGGACATGGTTGGAA | 58.934 | 50.000 | 0.73 | 0.00 | 45.50 | 3.53 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.