Multiple sequence alignment - TraesCS5B01G007600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G007600 chr5B 100.000 2705 0 0 1 2705 8877805 8875101 0.000000e+00 4996.0
1 TraesCS5B01G007600 chr5D 90.990 1465 81 24 788 2207 8493848 8492390 0.000000e+00 1927.0
2 TraesCS5B01G007600 chr5D 80.615 423 31 25 23 423 8494674 8494281 2.050000e-71 279.0
3 TraesCS5B01G007600 chr5D 85.714 98 12 2 662 758 8494085 8493989 4.760000e-18 102.0
4 TraesCS5B01G007600 chr5A 93.047 1280 64 12 774 2033 6667693 6666419 0.000000e+00 1847.0
5 TraesCS5B01G007600 chr5A 81.569 255 33 2 760 1008 538879077 538879323 5.910000e-47 198.0
6 TraesCS5B01G007600 chr5A 77.286 339 21 20 143 477 6715102 6714816 6.030000e-32 148.0
7 TraesCS5B01G007600 chr5A 80.769 104 11 4 663 758 6667929 6667827 3.740000e-09 73.1
8 TraesCS5B01G007600 chr1A 81.569 255 33 2 760 1008 118062254 118062500 5.910000e-47 198.0
9 TraesCS5B01G007600 chr6A 84.896 192 23 1 760 945 11526738 11526929 3.560000e-44 189.0
10 TraesCS5B01G007600 chr6A 84.375 192 24 1 760 945 540644345 540644154 1.650000e-42 183.0
11 TraesCS5B01G007600 chr4A 80.081 246 35 10 2229 2470 256063115 256063350 1.290000e-38 171.0
12 TraesCS5B01G007600 chr1D 89.231 130 9 3 2344 2470 244964871 244964998 1.000000e-34 158.0
13 TraesCS5B01G007600 chr7D 88.182 110 8 4 2344 2450 318730749 318730856 2.830000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G007600 chr5B 8875101 8877805 2704 True 4996.000000 4996 100.000 1 2705 1 chr5B.!!$R1 2704
1 TraesCS5B01G007600 chr5D 8492390 8494674 2284 True 769.333333 1927 85.773 23 2207 3 chr5D.!!$R1 2184
2 TraesCS5B01G007600 chr5A 6666419 6667929 1510 True 960.050000 1847 86.908 663 2033 2 chr5A.!!$R2 1370

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
658 726 0.327191 GTAGGGAGGGTTGGGGATGA 60.327 60.0 0.0 0.0 0.0 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2521 2765 0.034896 GGCCGAACAGTTTCTCCAGA 59.965 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.436998 CCTGTCGACTGGGCCGTC 62.437 72.222 28.59 15.55 0.00 4.79
19 20 4.436998 CTGTCGACTGGGCCGTCC 62.437 72.222 17.92 9.29 0.00 4.79
86 87 6.017934 TCAGAAGCAATTAATAACTCGCATCC 60.018 38.462 0.00 0.00 0.00 3.51
87 88 5.822519 AGAAGCAATTAATAACTCGCATCCA 59.177 36.000 0.00 0.00 0.00 3.41
88 89 5.679734 AGCAATTAATAACTCGCATCCAG 57.320 39.130 0.00 0.00 0.00 3.86
89 90 4.023707 AGCAATTAATAACTCGCATCCAGC 60.024 41.667 0.00 0.00 40.87 4.85
109 110 2.301870 GCGAGATAGAGAGAGGGAGAGA 59.698 54.545 0.00 0.00 0.00 3.10
126 134 4.155280 GGAGAGAGAGTCGCCTATTCATAC 59.845 50.000 0.00 0.00 41.83 2.39
130 138 6.014070 AGAGAGAGTCGCCTATTCATACTCTA 60.014 42.308 3.45 0.00 45.17 2.43
131 139 6.170506 AGAGAGTCGCCTATTCATACTCTAG 58.829 44.000 3.45 0.00 45.17 2.43
132 140 5.871834 AGAGTCGCCTATTCATACTCTAGT 58.128 41.667 0.00 0.00 43.79 2.57
133 141 7.006865 AGAGTCGCCTATTCATACTCTAGTA 57.993 40.000 0.00 0.00 43.79 1.82
136 144 7.225725 AGTCGCCTATTCATACTCTAGTACTT 58.774 38.462 0.00 0.00 32.72 2.24
137 145 7.173562 AGTCGCCTATTCATACTCTAGTACTTG 59.826 40.741 0.00 0.00 32.72 3.16
139 147 7.172875 TCGCCTATTCATACTCTAGTACTTGTC 59.827 40.741 0.00 0.00 32.72 3.18
140 148 7.041303 CGCCTATTCATACTCTAGTACTTGTCA 60.041 40.741 0.00 0.00 32.72 3.58
166 196 2.352032 CCCCGAAGCTTCTCGTCCT 61.352 63.158 23.50 0.00 37.11 3.85
171 201 0.458260 GAAGCTTCTCGTCCTCTCCC 59.542 60.000 19.44 0.00 0.00 4.30
172 202 0.973496 AAGCTTCTCGTCCTCTCCCC 60.973 60.000 0.00 0.00 0.00 4.81
173 203 1.380650 GCTTCTCGTCCTCTCCCCT 60.381 63.158 0.00 0.00 0.00 4.79
174 204 1.388837 GCTTCTCGTCCTCTCCCCTC 61.389 65.000 0.00 0.00 0.00 4.30
175 205 0.753848 CTTCTCGTCCTCTCCCCTCC 60.754 65.000 0.00 0.00 0.00 4.30
176 206 2.123640 CTCGTCCTCTCCCCTCCC 60.124 72.222 0.00 0.00 0.00 4.30
177 207 3.742248 CTCGTCCTCTCCCCTCCCC 62.742 73.684 0.00 0.00 0.00 4.81
257 287 1.299976 GGTAAGCAGTCCCACCCTG 59.700 63.158 0.00 0.00 0.00 4.45
306 337 4.443266 GCCCTCGTCTCTGCGCTT 62.443 66.667 9.73 0.00 0.00 4.68
307 338 2.507992 CCCTCGTCTCTGCGCTTG 60.508 66.667 9.73 1.08 0.00 4.01
308 339 2.507992 CCTCGTCTCTGCGCTTGG 60.508 66.667 9.73 0.00 0.00 3.61
309 340 2.507992 CTCGTCTCTGCGCTTGGG 60.508 66.667 9.73 0.96 0.00 4.12
310 341 4.742201 TCGTCTCTGCGCTTGGGC 62.742 66.667 9.73 2.60 0.00 5.36
476 507 2.791868 GCGGGGAGAGGAGCTTCTC 61.792 68.421 14.80 14.80 42.31 2.87
481 512 2.762043 AGAGGAGCTTCTCGCCCC 60.762 66.667 16.58 0.00 40.39 5.80
484 515 4.168291 GGAGCTTCTCGCCCCAGG 62.168 72.222 0.00 0.00 36.35 4.45
485 516 4.847444 GAGCTTCTCGCCCCAGGC 62.847 72.222 0.00 0.00 46.75 4.85
520 565 4.395583 GTTGTGCGGCTGCTGCTC 62.396 66.667 31.19 27.64 43.34 4.26
536 581 3.735208 GCTGCTCACGATTTAGTCTAGCA 60.735 47.826 0.00 0.00 37.64 3.49
537 582 3.770666 TGCTCACGATTTAGTCTAGCAC 58.229 45.455 0.00 0.00 36.10 4.40
538 583 3.444034 TGCTCACGATTTAGTCTAGCACT 59.556 43.478 0.00 0.00 36.10 4.40
540 585 3.770666 TCACGATTTAGTCTAGCACTGC 58.229 45.455 0.00 0.00 36.43 4.40
542 587 3.549471 CACGATTTAGTCTAGCACTGCTG 59.451 47.826 14.15 4.17 40.10 4.41
543 588 2.537625 CGATTTAGTCTAGCACTGCTGC 59.462 50.000 14.15 4.12 44.63 5.25
566 611 4.813526 CCGCTGTCGTCGTCGGAG 62.814 72.222 1.55 0.00 44.23 4.63
567 612 4.086178 CGCTGTCGTCGTCGGAGT 62.086 66.667 1.55 0.00 37.69 3.85
568 613 2.202324 GCTGTCGTCGTCGGAGTC 60.202 66.667 1.55 0.00 37.69 3.36
569 614 2.096030 CTGTCGTCGTCGGAGTCG 59.904 66.667 1.55 0.00 41.01 4.18
570 615 3.978867 CTGTCGTCGTCGGAGTCGC 62.979 68.421 1.55 0.00 39.21 5.19
571 616 3.786586 GTCGTCGTCGGAGTCGCT 61.787 66.667 1.55 0.00 39.21 4.93
572 617 3.785499 TCGTCGTCGGAGTCGCTG 61.785 66.667 1.55 0.00 39.21 5.18
598 643 4.681978 GTGCTGCGGTCCCGTCTT 62.682 66.667 7.66 0.00 42.09 3.01
599 644 4.680237 TGCTGCGGTCCCGTCTTG 62.680 66.667 7.66 0.00 42.09 3.02
600 645 4.681978 GCTGCGGTCCCGTCTTGT 62.682 66.667 7.66 0.00 42.09 3.16
601 646 2.738521 CTGCGGTCCCGTCTTGTG 60.739 66.667 7.66 0.00 42.09 3.33
602 647 4.980805 TGCGGTCCCGTCTTGTGC 62.981 66.667 7.66 0.00 42.09 4.57
604 649 4.657824 CGGTCCCGTCTTGTGCGT 62.658 66.667 0.00 0.00 34.35 5.24
605 650 2.280592 GGTCCCGTCTTGTGCGTT 60.281 61.111 0.00 0.00 0.00 4.84
606 651 2.604174 GGTCCCGTCTTGTGCGTTG 61.604 63.158 0.00 0.00 0.00 4.10
607 652 2.970324 TCCCGTCTTGTGCGTTGC 60.970 61.111 0.00 0.00 0.00 4.17
608 653 2.972505 CCCGTCTTGTGCGTTGCT 60.973 61.111 0.00 0.00 0.00 3.91
609 654 2.542907 CCCGTCTTGTGCGTTGCTT 61.543 57.895 0.00 0.00 0.00 3.91
616 661 1.943116 TTGTGCGTTGCTTTGCTGGT 61.943 50.000 0.00 0.00 0.00 4.00
618 663 2.412937 GCGTTGCTTTGCTGGTGT 59.587 55.556 0.00 0.00 0.00 4.16
630 675 3.832237 CTGGTGTGTGGCCGAGCTT 62.832 63.158 0.00 0.00 0.00 3.74
655 723 2.039951 CGTAGGGAGGGTTGGGGA 59.960 66.667 0.00 0.00 0.00 4.81
658 726 0.327191 GTAGGGAGGGTTGGGGATGA 60.327 60.000 0.00 0.00 0.00 2.92
674 742 7.709149 TGGGGATGATTTTGTTTTTGTTTTT 57.291 28.000 0.00 0.00 0.00 1.94
696 764 7.539712 TTTTCCAATGCTTCTACTAGATTCG 57.460 36.000 0.00 0.00 0.00 3.34
697 765 4.621991 TCCAATGCTTCTACTAGATTCGC 58.378 43.478 0.00 0.00 0.00 4.70
704 772 3.335786 TCTACTAGATTCGCGTTGCTC 57.664 47.619 5.77 0.00 0.00 4.26
707 775 1.202313 ACTAGATTCGCGTTGCTCCTC 60.202 52.381 5.77 0.00 0.00 3.71
755 854 3.569277 TGTTTGAGCTTGCTTATTGCTGA 59.431 39.130 0.00 0.00 43.37 4.26
761 860 2.475187 GCTTGCTTATTGCTGACACGAG 60.475 50.000 0.00 0.00 43.37 4.18
762 861 2.741759 TGCTTATTGCTGACACGAGA 57.258 45.000 0.00 0.00 43.37 4.04
763 862 3.038788 TGCTTATTGCTGACACGAGAA 57.961 42.857 0.00 0.00 43.37 2.87
764 863 3.398406 TGCTTATTGCTGACACGAGAAA 58.602 40.909 0.00 0.00 43.37 2.52
765 864 4.002982 TGCTTATTGCTGACACGAGAAAT 58.997 39.130 0.00 0.00 43.37 2.17
767 866 4.331168 GCTTATTGCTGACACGAGAAATCT 59.669 41.667 0.00 0.00 38.95 2.40
768 867 5.163814 GCTTATTGCTGACACGAGAAATCTT 60.164 40.000 0.00 0.00 38.95 2.40
770 869 5.786401 ATTGCTGACACGAGAAATCTTAC 57.214 39.130 0.00 0.00 0.00 2.34
771 870 4.521130 TGCTGACACGAGAAATCTTACT 57.479 40.909 0.00 0.00 0.00 2.24
772 871 4.486090 TGCTGACACGAGAAATCTTACTC 58.514 43.478 0.00 0.00 0.00 2.59
776 885 6.975772 GCTGACACGAGAAATCTTACTCTAAT 59.024 38.462 0.00 0.00 0.00 1.73
780 889 7.484975 ACACGAGAAATCTTACTCTAATCCTG 58.515 38.462 0.00 0.00 0.00 3.86
788 897 9.710818 AAATCTTACTCTAATCCTGTACCTGTA 57.289 33.333 0.00 0.00 0.00 2.74
870 1067 2.048503 GTTACCGCACGTCTGGCT 60.049 61.111 2.51 0.00 0.00 4.75
948 1145 5.300034 GCTGATGACCATAACCATTTGATCA 59.700 40.000 0.00 0.00 0.00 2.92
949 1146 6.015688 GCTGATGACCATAACCATTTGATCAT 60.016 38.462 0.00 0.00 0.00 2.45
972 1169 3.041940 GCTCGTCGTGGGTGGTTG 61.042 66.667 0.00 0.00 0.00 3.77
973 1170 2.357034 CTCGTCGTGGGTGGTTGG 60.357 66.667 0.00 0.00 0.00 3.77
975 1172 2.203098 CGTCGTGGGTGGTTGGTT 60.203 61.111 0.00 0.00 0.00 3.67
976 1173 2.248835 CGTCGTGGGTGGTTGGTTC 61.249 63.158 0.00 0.00 0.00 3.62
985 1182 3.119096 GGTTGGTTCCGAGCGAGC 61.119 66.667 0.00 0.00 0.00 5.03
1365 1565 1.826054 CAACCACTTCCCCAACGCA 60.826 57.895 0.00 0.00 0.00 5.24
1536 1736 2.518587 GCCGGGTTTCCCTATGGC 60.519 66.667 2.18 6.49 42.67 4.40
1542 1742 0.108019 GGTTTCCCTATGGCTACGGG 59.892 60.000 0.16 0.16 39.41 5.28
1656 1868 1.805945 CGTGTACCTCAAGGCGCTC 60.806 63.158 7.64 0.00 39.32 5.03
1686 1898 1.351430 TTGGCTTTCTCGTGATCGCG 61.351 55.000 22.36 22.36 36.96 5.87
1755 1977 7.222031 CCGTCATAATAAGAGAAACGATTGTCA 59.778 37.037 5.38 0.00 31.44 3.58
1857 2080 4.883083 AGCGAAAGTGTTCATAGAACTCA 58.117 39.130 10.79 0.00 32.89 3.41
1886 2109 1.475280 TGTGCTATTTAGACGCGGTCT 59.525 47.619 12.47 13.50 45.54 3.85
1887 2110 1.852895 GTGCTATTTAGACGCGGTCTG 59.147 52.381 12.47 0.21 43.30 3.51
1888 2111 1.746787 TGCTATTTAGACGCGGTCTGA 59.253 47.619 12.47 5.04 43.30 3.27
1889 2112 2.164827 TGCTATTTAGACGCGGTCTGAA 59.835 45.455 12.47 13.89 43.30 3.02
1890 2113 3.181479 TGCTATTTAGACGCGGTCTGAAT 60.181 43.478 22.23 22.23 45.94 2.57
1920 2143 3.057315 GCCTGTGTACCGTAGTAGTTTCA 60.057 47.826 0.00 0.00 0.00 2.69
1922 2145 4.022935 CCTGTGTACCGTAGTAGTTTCACA 60.023 45.833 0.00 0.00 33.33 3.58
1931 2154 5.152097 CGTAGTAGTTTCACACTGATTCGT 58.848 41.667 0.00 0.00 35.97 3.85
2007 2233 6.424176 TGTGTAATTTTGTTTCGACTGTCA 57.576 33.333 8.73 0.00 0.00 3.58
2023 2250 1.134220 TGTCAAAGTGAGTGGGGTGTC 60.134 52.381 0.00 0.00 0.00 3.67
2047 2278 4.334759 CAGCTATTTGGAGTCCATGTCTTG 59.665 45.833 14.00 4.34 31.53 3.02
2064 2295 5.141182 TGTCTTGTCTTCCTCTTCTGTACT 58.859 41.667 0.00 0.00 0.00 2.73
2065 2296 5.010112 TGTCTTGTCTTCCTCTTCTGTACTG 59.990 44.000 0.00 0.00 0.00 2.74
2068 2299 6.948886 TCTTGTCTTCCTCTTCTGTACTGTAT 59.051 38.462 0.00 0.00 0.00 2.29
2075 2306 9.360093 CTTCCTCTTCTGTACTGTATTGTTAAG 57.640 37.037 0.00 0.00 0.00 1.85
2087 2318 6.094048 ACTGTATTGTTAAGATGCTTTGCGAT 59.906 34.615 0.00 0.00 0.00 4.58
2102 2333 1.482182 TGCGATGATGGCTGTAACTCT 59.518 47.619 0.29 0.00 0.00 3.24
2103 2334 2.131183 GCGATGATGGCTGTAACTCTC 58.869 52.381 0.00 0.00 0.00 3.20
2137 2371 9.725019 AGTGTTCATGTTAGAATACTGAATTCA 57.275 29.630 8.12 8.12 44.76 2.57
2182 2425 5.587289 TGGTTTGACTGTAAAAATGAGTGC 58.413 37.500 0.00 0.00 0.00 4.40
2186 2430 4.633175 TGACTGTAAAAATGAGTGCGGTA 58.367 39.130 0.00 0.00 0.00 4.02
2204 2448 4.083802 GCGGTATGCAGTGATTTAGAATCC 60.084 45.833 0.00 0.00 45.45 3.01
2207 2451 6.347969 CGGTATGCAGTGATTTAGAATCCATG 60.348 42.308 0.00 0.00 0.00 3.66
2208 2452 4.906065 TGCAGTGATTTAGAATCCATGC 57.094 40.909 14.93 14.93 32.51 4.06
2209 2453 3.633525 TGCAGTGATTTAGAATCCATGCC 59.366 43.478 17.26 6.96 31.52 4.40
2210 2454 3.887716 GCAGTGATTTAGAATCCATGCCT 59.112 43.478 12.49 0.00 0.00 4.75
2211 2455 4.340381 GCAGTGATTTAGAATCCATGCCTT 59.660 41.667 12.49 0.00 0.00 4.35
2212 2456 5.163478 GCAGTGATTTAGAATCCATGCCTTT 60.163 40.000 12.49 0.00 0.00 3.11
2213 2457 6.628844 GCAGTGATTTAGAATCCATGCCTTTT 60.629 38.462 12.49 0.00 0.00 2.27
2214 2458 6.976925 CAGTGATTTAGAATCCATGCCTTTTC 59.023 38.462 0.00 0.00 0.00 2.29
2215 2459 6.894103 AGTGATTTAGAATCCATGCCTTTTCT 59.106 34.615 0.00 0.00 33.29 2.52
2216 2460 7.067981 AGTGATTTAGAATCCATGCCTTTTCTC 59.932 37.037 0.00 0.00 31.29 2.87
2217 2461 7.067981 GTGATTTAGAATCCATGCCTTTTCTCT 59.932 37.037 0.00 0.00 31.29 3.10
2218 2462 7.616935 TGATTTAGAATCCATGCCTTTTCTCTT 59.383 33.333 0.00 0.00 31.29 2.85
2219 2463 7.781324 TTTAGAATCCATGCCTTTTCTCTTT 57.219 32.000 0.00 0.00 31.29 2.52
2220 2464 7.781324 TTAGAATCCATGCCTTTTCTCTTTT 57.219 32.000 0.00 0.00 31.29 2.27
2221 2465 6.278172 AGAATCCATGCCTTTTCTCTTTTC 57.722 37.500 0.00 0.00 0.00 2.29
2222 2466 6.015282 AGAATCCATGCCTTTTCTCTTTTCT 58.985 36.000 0.00 0.00 0.00 2.52
2223 2467 5.656213 ATCCATGCCTTTTCTCTTTTCTG 57.344 39.130 0.00 0.00 0.00 3.02
2224 2468 3.256631 TCCATGCCTTTTCTCTTTTCTGC 59.743 43.478 0.00 0.00 0.00 4.26
2225 2469 3.006110 CCATGCCTTTTCTCTTTTCTGCA 59.994 43.478 0.00 0.00 0.00 4.41
2226 2470 4.501915 CCATGCCTTTTCTCTTTTCTGCAA 60.502 41.667 0.00 0.00 0.00 4.08
2227 2471 4.942761 TGCCTTTTCTCTTTTCTGCAAT 57.057 36.364 0.00 0.00 0.00 3.56
2228 2472 5.280654 TGCCTTTTCTCTTTTCTGCAATT 57.719 34.783 0.00 0.00 0.00 2.32
2229 2473 5.673514 TGCCTTTTCTCTTTTCTGCAATTT 58.326 33.333 0.00 0.00 0.00 1.82
2230 2474 6.815089 TGCCTTTTCTCTTTTCTGCAATTTA 58.185 32.000 0.00 0.00 0.00 1.40
2231 2475 7.444299 TGCCTTTTCTCTTTTCTGCAATTTAT 58.556 30.769 0.00 0.00 0.00 1.40
2232 2476 8.584157 TGCCTTTTCTCTTTTCTGCAATTTATA 58.416 29.630 0.00 0.00 0.00 0.98
2233 2477 9.591792 GCCTTTTCTCTTTTCTGCAATTTATAT 57.408 29.630 0.00 0.00 0.00 0.86
2254 2498 9.537192 TTATATATGGTCTTTTTACAGTCGGTG 57.463 33.333 0.00 0.00 0.00 4.94
2255 2499 2.841215 TGGTCTTTTTACAGTCGGTGG 58.159 47.619 0.00 0.00 0.00 4.61
2256 2500 2.171027 TGGTCTTTTTACAGTCGGTGGT 59.829 45.455 0.00 0.00 0.00 4.16
2257 2501 3.208594 GGTCTTTTTACAGTCGGTGGTT 58.791 45.455 0.00 0.00 0.00 3.67
2258 2502 3.628942 GGTCTTTTTACAGTCGGTGGTTT 59.371 43.478 0.00 0.00 0.00 3.27
2259 2503 4.815846 GGTCTTTTTACAGTCGGTGGTTTA 59.184 41.667 0.00 0.00 0.00 2.01
2260 2504 5.296531 GGTCTTTTTACAGTCGGTGGTTTAA 59.703 40.000 0.00 0.00 0.00 1.52
2261 2505 6.016860 GGTCTTTTTACAGTCGGTGGTTTAAT 60.017 38.462 0.00 0.00 0.00 1.40
2262 2506 7.420002 GTCTTTTTACAGTCGGTGGTTTAATT 58.580 34.615 0.00 0.00 0.00 1.40
2263 2507 8.558700 GTCTTTTTACAGTCGGTGGTTTAATTA 58.441 33.333 0.00 0.00 0.00 1.40
2264 2508 9.287373 TCTTTTTACAGTCGGTGGTTTAATTAT 57.713 29.630 0.00 0.00 0.00 1.28
2265 2509 9.337091 CTTTTTACAGTCGGTGGTTTAATTATG 57.663 33.333 0.00 0.00 0.00 1.90
2266 2510 8.618702 TTTTACAGTCGGTGGTTTAATTATGA 57.381 30.769 0.00 0.00 0.00 2.15
2267 2511 8.795842 TTTACAGTCGGTGGTTTAATTATGAT 57.204 30.769 0.00 0.00 0.00 2.45
2268 2512 8.795842 TTACAGTCGGTGGTTTAATTATGATT 57.204 30.769 0.00 0.00 0.00 2.57
2269 2513 7.316544 ACAGTCGGTGGTTTAATTATGATTC 57.683 36.000 0.00 0.00 0.00 2.52
2270 2514 6.317893 ACAGTCGGTGGTTTAATTATGATTCC 59.682 38.462 0.00 0.00 0.00 3.01
2271 2515 5.526111 AGTCGGTGGTTTAATTATGATTCCG 59.474 40.000 10.53 10.53 36.30 4.30
2272 2516 4.817464 TCGGTGGTTTAATTATGATTCCGG 59.183 41.667 0.00 0.00 35.78 5.14
2273 2517 4.023536 CGGTGGTTTAATTATGATTCCGGG 60.024 45.833 0.00 0.00 0.00 5.73
2274 2518 4.891168 GGTGGTTTAATTATGATTCCGGGT 59.109 41.667 0.00 0.00 0.00 5.28
2275 2519 5.009310 GGTGGTTTAATTATGATTCCGGGTC 59.991 44.000 0.00 0.45 0.00 4.46
2276 2520 4.817464 TGGTTTAATTATGATTCCGGGTCG 59.183 41.667 0.00 0.00 0.00 4.79
2277 2521 5.058490 GGTTTAATTATGATTCCGGGTCGA 58.942 41.667 0.00 0.00 0.00 4.20
2278 2522 5.528320 GGTTTAATTATGATTCCGGGTCGAA 59.472 40.000 0.00 0.00 0.00 3.71
2279 2523 6.206048 GGTTTAATTATGATTCCGGGTCGAAT 59.794 38.462 0.00 0.00 35.14 3.34
2280 2524 6.795098 TTAATTATGATTCCGGGTCGAATG 57.205 37.500 0.00 0.00 32.56 2.67
2281 2525 4.617253 ATTATGATTCCGGGTCGAATGA 57.383 40.909 0.00 0.00 32.56 2.57
2282 2526 4.617253 TTATGATTCCGGGTCGAATGAT 57.383 40.909 0.00 0.00 32.56 2.45
2283 2527 3.492102 ATGATTCCGGGTCGAATGATT 57.508 42.857 0.00 0.00 32.56 2.57
2284 2528 2.833794 TGATTCCGGGTCGAATGATTC 58.166 47.619 0.00 0.00 32.56 2.52
2285 2529 2.169561 TGATTCCGGGTCGAATGATTCA 59.830 45.455 0.00 0.00 32.56 2.57
2286 2530 3.181455 TGATTCCGGGTCGAATGATTCAT 60.181 43.478 0.00 0.00 32.56 2.57
2287 2531 2.238942 TCCGGGTCGAATGATTCATG 57.761 50.000 0.00 0.00 0.00 3.07
2288 2532 1.484653 TCCGGGTCGAATGATTCATGT 59.515 47.619 0.00 0.00 0.00 3.21
2289 2533 1.867233 CCGGGTCGAATGATTCATGTC 59.133 52.381 5.95 0.21 0.00 3.06
2290 2534 1.522676 CGGGTCGAATGATTCATGTCG 59.477 52.381 17.58 17.58 34.85 4.35
2291 2535 1.261619 GGGTCGAATGATTCATGTCGC 59.738 52.381 18.30 14.83 33.58 5.19
2292 2536 1.261619 GGTCGAATGATTCATGTCGCC 59.738 52.381 18.30 17.80 33.58 5.54
2293 2537 1.071239 GTCGAATGATTCATGTCGCCG 60.071 52.381 18.30 10.52 33.58 6.46
2294 2538 0.383491 CGAATGATTCATGTCGCCGC 60.383 55.000 5.95 0.00 0.00 6.53
2295 2539 0.383491 GAATGATTCATGTCGCCGCG 60.383 55.000 6.39 6.39 0.00 6.46
2296 2540 1.775039 AATGATTCATGTCGCCGCGG 61.775 55.000 24.05 24.05 0.00 6.46
2297 2541 2.890474 GATTCATGTCGCCGCGGT 60.890 61.111 28.70 2.33 0.00 5.68
2298 2542 2.435938 ATTCATGTCGCCGCGGTT 60.436 55.556 28.70 3.81 0.00 4.44
2299 2543 2.631696 GATTCATGTCGCCGCGGTTG 62.632 60.000 28.70 19.94 0.00 3.77
2318 2562 2.292103 GCAGGTGCAACTTTGTTTCA 57.708 45.000 0.00 0.00 41.59 2.69
2319 2563 2.825205 GCAGGTGCAACTTTGTTTCAT 58.175 42.857 0.00 0.00 41.59 2.57
2320 2564 3.197265 GCAGGTGCAACTTTGTTTCATT 58.803 40.909 0.00 0.00 41.59 2.57
2321 2565 3.622612 GCAGGTGCAACTTTGTTTCATTT 59.377 39.130 0.00 0.00 41.59 2.32
2322 2566 4.094739 GCAGGTGCAACTTTGTTTCATTTT 59.905 37.500 0.00 0.00 41.59 1.82
2323 2567 5.727515 GCAGGTGCAACTTTGTTTCATTTTC 60.728 40.000 0.00 0.00 41.59 2.29
2324 2568 4.875536 AGGTGCAACTTTGTTTCATTTTCC 59.124 37.500 0.00 0.00 36.74 3.13
2325 2569 4.633565 GGTGCAACTTTGTTTCATTTTCCA 59.366 37.500 0.00 0.00 36.74 3.53
2326 2570 5.123027 GGTGCAACTTTGTTTCATTTTCCAA 59.877 36.000 0.00 0.00 36.74 3.53
2327 2571 6.250089 GTGCAACTTTGTTTCATTTTCCAAG 58.750 36.000 0.00 0.00 0.00 3.61
2328 2572 5.353678 TGCAACTTTGTTTCATTTTCCAAGG 59.646 36.000 0.00 0.00 0.00 3.61
2329 2573 5.353956 GCAACTTTGTTTCATTTTCCAAGGT 59.646 36.000 0.00 0.00 0.00 3.50
2330 2574 6.456853 GCAACTTTGTTTCATTTTCCAAGGTC 60.457 38.462 0.00 0.00 0.00 3.85
2331 2575 5.670485 ACTTTGTTTCATTTTCCAAGGTCC 58.330 37.500 0.00 0.00 0.00 4.46
2332 2576 5.425217 ACTTTGTTTCATTTTCCAAGGTCCT 59.575 36.000 0.00 0.00 0.00 3.85
2333 2577 4.935352 TGTTTCATTTTCCAAGGTCCTG 57.065 40.909 0.00 0.00 0.00 3.86
2334 2578 4.285863 TGTTTCATTTTCCAAGGTCCTGT 58.714 39.130 0.00 0.00 0.00 4.00
2335 2579 4.099266 TGTTTCATTTTCCAAGGTCCTGTG 59.901 41.667 0.00 0.00 0.00 3.66
2336 2580 3.593442 TCATTTTCCAAGGTCCTGTGT 57.407 42.857 0.00 0.00 0.00 3.72
2337 2581 4.715534 TCATTTTCCAAGGTCCTGTGTA 57.284 40.909 0.00 0.00 0.00 2.90
2338 2582 5.255397 TCATTTTCCAAGGTCCTGTGTAT 57.745 39.130 0.00 0.00 0.00 2.29
2339 2583 5.009631 TCATTTTCCAAGGTCCTGTGTATG 58.990 41.667 0.00 0.00 0.00 2.39
2340 2584 2.489938 TTCCAAGGTCCTGTGTATGC 57.510 50.000 0.00 0.00 0.00 3.14
2341 2585 1.357137 TCCAAGGTCCTGTGTATGCA 58.643 50.000 0.00 0.00 0.00 3.96
2342 2586 1.915489 TCCAAGGTCCTGTGTATGCAT 59.085 47.619 3.79 3.79 0.00 3.96
2343 2587 2.308570 TCCAAGGTCCTGTGTATGCATT 59.691 45.455 3.54 0.00 0.00 3.56
2344 2588 3.091545 CCAAGGTCCTGTGTATGCATTT 58.908 45.455 3.54 0.00 0.00 2.32
2345 2589 3.511146 CCAAGGTCCTGTGTATGCATTTT 59.489 43.478 3.54 0.00 0.00 1.82
2346 2590 4.380867 CCAAGGTCCTGTGTATGCATTTTC 60.381 45.833 3.54 0.00 0.00 2.29
2347 2591 3.356290 AGGTCCTGTGTATGCATTTTCC 58.644 45.455 3.54 0.00 0.00 3.13
2348 2592 2.097466 GGTCCTGTGTATGCATTTTCCG 59.903 50.000 3.54 0.00 0.00 4.30
2349 2593 2.097466 GTCCTGTGTATGCATTTTCCGG 59.903 50.000 3.54 0.00 0.00 5.14
2350 2594 2.091541 CCTGTGTATGCATTTTCCGGT 58.908 47.619 3.54 0.00 0.00 5.28
2351 2595 2.097466 CCTGTGTATGCATTTTCCGGTC 59.903 50.000 3.54 0.00 0.00 4.79
2352 2596 3.009723 CTGTGTATGCATTTTCCGGTCT 58.990 45.455 3.54 0.00 0.00 3.85
2353 2597 3.417101 TGTGTATGCATTTTCCGGTCTT 58.583 40.909 3.54 0.00 0.00 3.01
2354 2598 3.190327 TGTGTATGCATTTTCCGGTCTTG 59.810 43.478 3.54 0.00 0.00 3.02
2355 2599 3.438781 GTGTATGCATTTTCCGGTCTTGA 59.561 43.478 3.54 0.00 0.00 3.02
2356 2600 4.075682 TGTATGCATTTTCCGGTCTTGAA 58.924 39.130 3.54 0.00 0.00 2.69
2357 2601 3.575965 ATGCATTTTCCGGTCTTGAAC 57.424 42.857 0.00 0.00 0.00 3.18
2358 2602 2.302260 TGCATTTTCCGGTCTTGAACA 58.698 42.857 0.00 0.00 0.00 3.18
2359 2603 2.293122 TGCATTTTCCGGTCTTGAACAG 59.707 45.455 0.00 0.00 0.00 3.16
2360 2604 2.293399 GCATTTTCCGGTCTTGAACAGT 59.707 45.455 0.00 0.00 0.00 3.55
2361 2605 3.609409 GCATTTTCCGGTCTTGAACAGTC 60.609 47.826 0.00 0.00 0.00 3.51
2362 2606 3.553828 TTTTCCGGTCTTGAACAGTCT 57.446 42.857 0.00 0.00 0.00 3.24
2363 2607 2.526304 TTCCGGTCTTGAACAGTCTG 57.474 50.000 0.00 0.00 0.00 3.51
2364 2608 1.699730 TCCGGTCTTGAACAGTCTGA 58.300 50.000 6.91 0.00 0.00 3.27
2365 2609 2.036387 TCCGGTCTTGAACAGTCTGAA 58.964 47.619 6.91 0.00 0.00 3.02
2366 2610 2.135933 CCGGTCTTGAACAGTCTGAAC 58.864 52.381 6.91 0.61 0.00 3.18
2367 2611 2.483013 CCGGTCTTGAACAGTCTGAACA 60.483 50.000 6.91 3.35 0.00 3.18
2368 2612 3.393800 CGGTCTTGAACAGTCTGAACAT 58.606 45.455 6.91 0.00 0.00 2.71
2369 2613 3.430218 CGGTCTTGAACAGTCTGAACATC 59.570 47.826 6.91 0.28 0.00 3.06
2370 2614 4.636249 GGTCTTGAACAGTCTGAACATCT 58.364 43.478 6.91 0.00 0.00 2.90
2371 2615 4.450419 GGTCTTGAACAGTCTGAACATCTG 59.550 45.833 6.91 0.00 35.60 2.90
2372 2616 4.450419 GTCTTGAACAGTCTGAACATCTGG 59.550 45.833 6.91 0.00 34.02 3.86
2373 2617 3.407424 TGAACAGTCTGAACATCTGGG 57.593 47.619 6.91 0.00 34.02 4.45
2374 2618 2.038952 TGAACAGTCTGAACATCTGGGG 59.961 50.000 6.91 0.00 34.02 4.96
2375 2619 2.030027 ACAGTCTGAACATCTGGGGA 57.970 50.000 6.91 0.00 34.02 4.81
2376 2620 2.555664 ACAGTCTGAACATCTGGGGAT 58.444 47.619 6.91 0.00 34.02 3.85
2377 2621 2.503356 ACAGTCTGAACATCTGGGGATC 59.497 50.000 6.91 0.00 34.02 3.36
2378 2622 2.122768 AGTCTGAACATCTGGGGATCC 58.877 52.381 1.92 1.92 0.00 3.36
2379 2623 1.123077 TCTGAACATCTGGGGATCCG 58.877 55.000 5.45 0.00 35.24 4.18
2380 2624 0.107456 CTGAACATCTGGGGATCCGG 59.893 60.000 5.45 0.00 40.84 5.14
2381 2625 1.227973 GAACATCTGGGGATCCGGC 60.228 63.158 5.45 0.00 39.31 6.13
2382 2626 2.996168 GAACATCTGGGGATCCGGCG 62.996 65.000 5.45 0.00 39.31 6.46
2383 2627 3.550431 CATCTGGGGATCCGGCGT 61.550 66.667 6.01 0.00 39.31 5.68
2384 2628 3.234730 ATCTGGGGATCCGGCGTC 61.235 66.667 6.01 0.00 39.31 5.19
2388 2632 4.664677 GGGGATCCGGCGTCGATG 62.665 72.222 12.93 0.00 39.00 3.84
2389 2633 3.912907 GGGATCCGGCGTCGATGT 61.913 66.667 12.93 0.00 39.00 3.06
2390 2634 2.106332 GGATCCGGCGTCGATGTT 59.894 61.111 12.93 0.00 39.00 2.71
2391 2635 2.237751 GGATCCGGCGTCGATGTTG 61.238 63.158 12.93 0.00 39.00 3.33
2392 2636 1.518572 GATCCGGCGTCGATGTTGT 60.519 57.895 12.93 0.00 39.00 3.32
2393 2637 1.752501 GATCCGGCGTCGATGTTGTG 61.753 60.000 12.93 0.00 39.00 3.33
2394 2638 2.220615 ATCCGGCGTCGATGTTGTGA 62.221 55.000 12.93 0.00 39.00 3.58
2395 2639 2.444624 CCGGCGTCGATGTTGTGAG 61.445 63.158 12.93 0.00 39.00 3.51
2396 2640 1.733041 CGGCGTCGATGTTGTGAGT 60.733 57.895 1.44 0.00 39.00 3.41
2397 2641 1.674611 CGGCGTCGATGTTGTGAGTC 61.675 60.000 1.44 0.00 39.00 3.36
2398 2642 1.352156 GGCGTCGATGTTGTGAGTCC 61.352 60.000 6.48 0.00 0.00 3.85
2399 2643 0.666274 GCGTCGATGTTGTGAGTCCA 60.666 55.000 6.48 0.00 0.00 4.02
2400 2644 1.996292 CGTCGATGTTGTGAGTCCAT 58.004 50.000 0.00 0.00 0.00 3.41
2401 2645 1.920574 CGTCGATGTTGTGAGTCCATC 59.079 52.381 0.00 0.00 33.30 3.51
2402 2646 2.671070 CGTCGATGTTGTGAGTCCATCA 60.671 50.000 0.00 2.68 35.76 3.07
2412 2656 2.229792 TGAGTCCATCACCTGTTTTGC 58.770 47.619 0.00 0.00 31.12 3.68
2413 2657 2.229792 GAGTCCATCACCTGTTTTGCA 58.770 47.619 0.00 0.00 0.00 4.08
2414 2658 2.821969 GAGTCCATCACCTGTTTTGCAT 59.178 45.455 0.00 0.00 0.00 3.96
2415 2659 3.233507 AGTCCATCACCTGTTTTGCATT 58.766 40.909 0.00 0.00 0.00 3.56
2416 2660 3.006110 AGTCCATCACCTGTTTTGCATTG 59.994 43.478 0.00 0.00 0.00 2.82
2417 2661 2.070783 CCATCACCTGTTTTGCATTGC 58.929 47.619 0.46 0.46 0.00 3.56
2418 2662 2.070783 CATCACCTGTTTTGCATTGCC 58.929 47.619 6.12 0.00 0.00 4.52
2419 2663 1.412079 TCACCTGTTTTGCATTGCCT 58.588 45.000 6.12 0.00 0.00 4.75
2420 2664 1.068895 TCACCTGTTTTGCATTGCCTG 59.931 47.619 6.12 0.00 0.00 4.85
2421 2665 0.393820 ACCTGTTTTGCATTGCCTGG 59.606 50.000 6.12 6.59 0.00 4.45
2422 2666 0.320946 CCTGTTTTGCATTGCCTGGG 60.321 55.000 6.12 0.00 0.00 4.45
2423 2667 0.680618 CTGTTTTGCATTGCCTGGGA 59.319 50.000 6.12 0.00 0.00 4.37
2424 2668 0.680618 TGTTTTGCATTGCCTGGGAG 59.319 50.000 6.12 0.00 0.00 4.30
2425 2669 0.037046 GTTTTGCATTGCCTGGGAGG 60.037 55.000 6.12 0.00 38.80 4.30
2438 2682 3.784178 CCTGGGAGGCTTGATAGATAGA 58.216 50.000 0.00 0.00 0.00 1.98
2439 2683 4.360889 CCTGGGAGGCTTGATAGATAGAT 58.639 47.826 0.00 0.00 0.00 1.98
2440 2684 5.523588 CCTGGGAGGCTTGATAGATAGATA 58.476 45.833 0.00 0.00 0.00 1.98
2441 2685 6.142498 CCTGGGAGGCTTGATAGATAGATAT 58.858 44.000 0.00 0.00 0.00 1.63
2442 2686 6.041865 CCTGGGAGGCTTGATAGATAGATATG 59.958 46.154 0.00 0.00 0.00 1.78
2443 2687 5.901853 TGGGAGGCTTGATAGATAGATATGG 59.098 44.000 0.00 0.00 0.00 2.74
2444 2688 5.221621 GGGAGGCTTGATAGATAGATATGGC 60.222 48.000 0.00 0.00 0.00 4.40
2445 2689 5.221621 GGAGGCTTGATAGATAGATATGGCC 60.222 48.000 0.00 0.00 36.51 5.36
2446 2690 5.536951 AGGCTTGATAGATAGATATGGCCT 58.463 41.667 3.32 0.00 40.95 5.19
2447 2691 5.366186 AGGCTTGATAGATAGATATGGCCTG 59.634 44.000 3.32 0.00 43.56 4.85
2448 2692 5.055812 GCTTGATAGATAGATATGGCCTGC 58.944 45.833 3.32 0.00 0.00 4.85
2449 2693 5.163322 GCTTGATAGATAGATATGGCCTGCT 60.163 44.000 3.32 0.00 0.00 4.24
2450 2694 6.477053 TTGATAGATAGATATGGCCTGCTC 57.523 41.667 3.32 0.00 0.00 4.26
2451 2695 4.582240 TGATAGATAGATATGGCCTGCTCG 59.418 45.833 3.32 0.00 0.00 5.03
2452 2696 2.106566 AGATAGATATGGCCTGCTCGG 58.893 52.381 3.32 0.00 0.00 4.63
2461 2705 2.787249 CCTGCTCGGCGTCAATTG 59.213 61.111 6.85 0.00 0.00 2.32
2462 2706 2.034879 CCTGCTCGGCGTCAATTGT 61.035 57.895 6.85 0.00 0.00 2.71
2463 2707 0.739462 CCTGCTCGGCGTCAATTGTA 60.739 55.000 6.85 0.00 0.00 2.41
2464 2708 1.290203 CTGCTCGGCGTCAATTGTAT 58.710 50.000 6.85 0.00 0.00 2.29
2465 2709 1.004610 CTGCTCGGCGTCAATTGTATG 60.005 52.381 6.85 0.00 0.00 2.39
2466 2710 1.286501 GCTCGGCGTCAATTGTATGA 58.713 50.000 6.85 0.00 0.00 2.15
2467 2711 1.867233 GCTCGGCGTCAATTGTATGAT 59.133 47.619 6.85 0.00 0.00 2.45
2468 2712 2.348872 GCTCGGCGTCAATTGTATGATG 60.349 50.000 6.85 0.00 38.97 3.07
2469 2713 2.866156 CTCGGCGTCAATTGTATGATGT 59.134 45.455 6.85 0.00 38.36 3.06
2470 2714 3.266636 TCGGCGTCAATTGTATGATGTT 58.733 40.909 6.85 0.00 38.36 2.71
2471 2715 3.687212 TCGGCGTCAATTGTATGATGTTT 59.313 39.130 6.85 0.00 38.36 2.83
2472 2716 4.155099 TCGGCGTCAATTGTATGATGTTTT 59.845 37.500 6.85 0.00 38.36 2.43
2473 2717 4.262743 CGGCGTCAATTGTATGATGTTTTG 59.737 41.667 5.13 0.00 38.36 2.44
2474 2718 4.562394 GGCGTCAATTGTATGATGTTTTGG 59.438 41.667 5.13 0.00 38.36 3.28
2475 2719 5.398169 GCGTCAATTGTATGATGTTTTGGA 58.602 37.500 5.13 0.00 38.36 3.53
2476 2720 5.861251 GCGTCAATTGTATGATGTTTTGGAA 59.139 36.000 5.13 0.00 38.36 3.53
2477 2721 6.033831 GCGTCAATTGTATGATGTTTTGGAAG 59.966 38.462 5.13 0.00 38.36 3.46
2478 2722 6.527722 CGTCAATTGTATGATGTTTTGGAAGG 59.472 38.462 5.13 0.00 32.75 3.46
2479 2723 7.574779 CGTCAATTGTATGATGTTTTGGAAGGA 60.575 37.037 5.13 0.00 32.75 3.36
2480 2724 8.253113 GTCAATTGTATGATGTTTTGGAAGGAT 58.747 33.333 5.13 0.00 0.00 3.24
2481 2725 9.473007 TCAATTGTATGATGTTTTGGAAGGATA 57.527 29.630 5.13 0.00 0.00 2.59
2482 2726 9.740239 CAATTGTATGATGTTTTGGAAGGATAG 57.260 33.333 0.00 0.00 0.00 2.08
2483 2727 7.880160 TTGTATGATGTTTTGGAAGGATAGG 57.120 36.000 0.00 0.00 0.00 2.57
2484 2728 6.969043 TGTATGATGTTTTGGAAGGATAGGT 58.031 36.000 0.00 0.00 0.00 3.08
2485 2729 7.054124 TGTATGATGTTTTGGAAGGATAGGTC 58.946 38.462 0.00 0.00 0.00 3.85
2486 2730 5.512942 TGATGTTTTGGAAGGATAGGTCA 57.487 39.130 0.00 0.00 0.00 4.02
2487 2731 6.078456 TGATGTTTTGGAAGGATAGGTCAT 57.922 37.500 0.00 0.00 0.00 3.06
2488 2732 6.122277 TGATGTTTTGGAAGGATAGGTCATC 58.878 40.000 0.00 0.00 0.00 2.92
2489 2733 5.779241 TGTTTTGGAAGGATAGGTCATCT 57.221 39.130 0.00 0.00 33.78 2.90
2490 2734 5.500234 TGTTTTGGAAGGATAGGTCATCTG 58.500 41.667 0.00 0.00 33.78 2.90
2491 2735 4.778213 TTTGGAAGGATAGGTCATCTGG 57.222 45.455 0.00 0.00 33.78 3.86
2492 2736 2.050144 TGGAAGGATAGGTCATCTGGC 58.950 52.381 0.00 0.00 33.78 4.85
2493 2737 2.334023 GGAAGGATAGGTCATCTGGCT 58.666 52.381 0.00 0.00 33.78 4.75
2494 2738 2.038295 GGAAGGATAGGTCATCTGGCTG 59.962 54.545 0.00 0.00 33.78 4.85
2495 2739 1.727062 AGGATAGGTCATCTGGCTGG 58.273 55.000 0.00 0.00 33.78 4.85
2496 2740 0.689623 GGATAGGTCATCTGGCTGGG 59.310 60.000 0.00 0.00 33.78 4.45
2497 2741 1.722034 GATAGGTCATCTGGCTGGGA 58.278 55.000 0.00 0.00 0.00 4.37
2498 2742 1.622811 GATAGGTCATCTGGCTGGGAG 59.377 57.143 0.00 0.00 0.00 4.30
2499 2743 0.636647 TAGGTCATCTGGCTGGGAGA 59.363 55.000 0.00 0.00 0.00 3.71
2500 2744 0.980231 AGGTCATCTGGCTGGGAGAC 60.980 60.000 0.00 0.00 0.00 3.36
2513 2757 3.989782 GGAGACCTCTGGAGTCTGA 57.010 57.895 0.00 0.00 0.00 3.27
2514 2758 1.762708 GGAGACCTCTGGAGTCTGAG 58.237 60.000 0.00 6.69 38.30 3.35
2515 2759 1.102978 GAGACCTCTGGAGTCTGAGC 58.897 60.000 0.00 0.00 37.56 4.26
2516 2760 0.324275 AGACCTCTGGAGTCTGAGCC 60.324 60.000 7.78 0.00 37.56 4.70
2517 2761 0.613292 GACCTCTGGAGTCTGAGCCA 60.613 60.000 7.78 0.00 37.56 4.75
2520 2764 3.385469 CTGGAGTCTGAGCCAGCA 58.615 61.111 12.05 0.00 44.53 4.41
2521 2765 1.906253 CTGGAGTCTGAGCCAGCAT 59.094 57.895 12.05 0.00 44.53 3.79
2522 2766 0.179078 CTGGAGTCTGAGCCAGCATC 60.179 60.000 12.05 0.00 44.53 3.91
2523 2767 0.616964 TGGAGTCTGAGCCAGCATCT 60.617 55.000 0.00 0.00 0.00 2.90
2524 2768 0.179078 GGAGTCTGAGCCAGCATCTG 60.179 60.000 0.00 0.00 0.00 2.90
2537 2781 2.414481 CAGCATCTGGAGAAACTGTTCG 59.586 50.000 0.00 0.00 38.90 3.95
2538 2782 1.734465 GCATCTGGAGAAACTGTTCGG 59.266 52.381 0.00 0.00 38.90 4.30
2539 2783 1.734465 CATCTGGAGAAACTGTTCGGC 59.266 52.381 0.00 0.00 38.90 5.54
2540 2784 0.034896 TCTGGAGAAACTGTTCGGCC 59.965 55.000 0.00 0.00 38.90 6.13
2541 2785 0.035458 CTGGAGAAACTGTTCGGCCT 59.965 55.000 0.00 0.00 38.90 5.19
2542 2786 0.034896 TGGAGAAACTGTTCGGCCTC 59.965 55.000 0.00 0.00 38.90 4.70
2543 2787 0.673956 GGAGAAACTGTTCGGCCTCC 60.674 60.000 0.00 12.26 38.90 4.30
2544 2788 0.321996 GAGAAACTGTTCGGCCTCCT 59.678 55.000 0.00 0.00 38.90 3.69
2545 2789 0.765510 AGAAACTGTTCGGCCTCCTT 59.234 50.000 0.00 0.00 38.90 3.36
2546 2790 1.157585 GAAACTGTTCGGCCTCCTTC 58.842 55.000 0.00 0.00 0.00 3.46
2547 2791 0.765510 AAACTGTTCGGCCTCCTTCT 59.234 50.000 0.00 0.00 0.00 2.85
2548 2792 0.035458 AACTGTTCGGCCTCCTTCTG 59.965 55.000 0.00 0.00 0.00 3.02
2549 2793 1.078848 CTGTTCGGCCTCCTTCTGG 60.079 63.158 0.00 0.00 0.00 3.86
2550 2794 1.831652 CTGTTCGGCCTCCTTCTGGT 61.832 60.000 0.00 0.00 34.23 4.00
2551 2795 1.375326 GTTCGGCCTCCTTCTGGTT 59.625 57.895 0.00 0.00 34.23 3.67
2552 2796 0.250770 GTTCGGCCTCCTTCTGGTTT 60.251 55.000 0.00 0.00 34.23 3.27
2553 2797 0.250727 TTCGGCCTCCTTCTGGTTTG 60.251 55.000 0.00 0.00 34.23 2.93
2554 2798 1.675641 CGGCCTCCTTCTGGTTTGG 60.676 63.158 0.00 0.00 34.23 3.28
2555 2799 1.767692 GGCCTCCTTCTGGTTTGGA 59.232 57.895 0.00 0.00 34.23 3.53
2556 2800 0.322906 GGCCTCCTTCTGGTTTGGAG 60.323 60.000 0.00 0.00 45.02 3.86
2559 2803 2.777832 CTCCTTCTGGTTTGGAGGAG 57.222 55.000 4.64 4.64 42.55 3.69
2560 2804 0.693049 TCCTTCTGGTTTGGAGGAGC 59.307 55.000 0.00 0.00 34.23 4.70
2561 2805 0.695347 CCTTCTGGTTTGGAGGAGCT 59.305 55.000 0.00 0.00 0.00 4.09
2562 2806 1.074566 CCTTCTGGTTTGGAGGAGCTT 59.925 52.381 0.00 0.00 0.00 3.74
2563 2807 2.489802 CCTTCTGGTTTGGAGGAGCTTT 60.490 50.000 0.00 0.00 0.00 3.51
2564 2808 2.276732 TCTGGTTTGGAGGAGCTTTG 57.723 50.000 0.00 0.00 0.00 2.77
2565 2809 1.494721 TCTGGTTTGGAGGAGCTTTGT 59.505 47.619 0.00 0.00 0.00 2.83
2566 2810 2.708861 TCTGGTTTGGAGGAGCTTTGTA 59.291 45.455 0.00 0.00 0.00 2.41
2567 2811 3.077359 CTGGTTTGGAGGAGCTTTGTAG 58.923 50.000 0.00 0.00 0.00 2.74
2568 2812 2.224769 TGGTTTGGAGGAGCTTTGTAGG 60.225 50.000 0.00 0.00 0.00 3.18
2569 2813 2.039879 GGTTTGGAGGAGCTTTGTAGGA 59.960 50.000 0.00 0.00 0.00 2.94
2570 2814 3.497942 GGTTTGGAGGAGCTTTGTAGGAA 60.498 47.826 0.00 0.00 0.00 3.36
2571 2815 3.418684 TTGGAGGAGCTTTGTAGGAAC 57.581 47.619 0.00 0.00 0.00 3.62
2572 2816 2.621070 TGGAGGAGCTTTGTAGGAACT 58.379 47.619 0.00 0.00 46.37 3.01
2573 2817 2.567615 TGGAGGAGCTTTGTAGGAACTC 59.432 50.000 0.00 0.00 41.75 3.01
2574 2818 2.835156 GGAGGAGCTTTGTAGGAACTCT 59.165 50.000 0.00 0.00 41.75 3.24
2575 2819 4.024670 GGAGGAGCTTTGTAGGAACTCTA 58.975 47.826 0.00 0.00 41.75 2.43
2576 2820 4.651962 GGAGGAGCTTTGTAGGAACTCTAT 59.348 45.833 0.00 0.00 41.75 1.98
2577 2821 5.834204 GGAGGAGCTTTGTAGGAACTCTATA 59.166 44.000 0.00 0.00 41.75 1.31
2578 2822 6.015772 GGAGGAGCTTTGTAGGAACTCTATAG 60.016 46.154 0.00 0.00 41.75 1.31
2579 2823 5.836358 AGGAGCTTTGTAGGAACTCTATAGG 59.164 44.000 0.00 0.00 41.75 2.57
2580 2824 5.834204 GGAGCTTTGTAGGAACTCTATAGGA 59.166 44.000 0.00 0.00 41.75 2.94
2581 2825 6.324254 GGAGCTTTGTAGGAACTCTATAGGAA 59.676 42.308 0.00 0.00 41.75 3.36
2582 2826 7.147707 GGAGCTTTGTAGGAACTCTATAGGAAA 60.148 40.741 0.00 0.00 41.75 3.13
2583 2827 8.147244 AGCTTTGTAGGAACTCTATAGGAAAA 57.853 34.615 0.00 0.00 41.75 2.29
2584 2828 8.603304 AGCTTTGTAGGAACTCTATAGGAAAAA 58.397 33.333 0.00 0.00 41.75 1.94
2585 2829 9.397280 GCTTTGTAGGAACTCTATAGGAAAAAT 57.603 33.333 0.00 0.00 41.75 1.82
2603 2847 9.601810 AGGAAAAATAAAATCCTTTACAGTCCT 57.398 29.630 0.00 0.00 40.70 3.85
2607 2851 9.996554 AAAATAAAATCCTTTACAGTCCTTTGG 57.003 29.630 0.00 0.00 29.82 3.28
2608 2852 8.721133 AATAAAATCCTTTACAGTCCTTTGGT 57.279 30.769 0.00 0.00 29.82 3.67
2609 2853 8.721133 ATAAAATCCTTTACAGTCCTTTGGTT 57.279 30.769 0.00 0.00 29.82 3.67
2610 2854 7.432148 AAAATCCTTTACAGTCCTTTGGTTT 57.568 32.000 0.00 0.00 0.00 3.27
2611 2855 6.405278 AATCCTTTACAGTCCTTTGGTTTG 57.595 37.500 0.00 0.00 0.00 2.93
2612 2856 4.862371 TCCTTTACAGTCCTTTGGTTTGT 58.138 39.130 0.00 0.00 0.00 2.83
2613 2857 6.003859 TCCTTTACAGTCCTTTGGTTTGTA 57.996 37.500 0.00 0.00 0.00 2.41
2614 2858 6.424883 TCCTTTACAGTCCTTTGGTTTGTAA 58.575 36.000 9.67 9.67 34.04 2.41
2615 2859 6.890814 TCCTTTACAGTCCTTTGGTTTGTAAA 59.109 34.615 17.81 17.81 38.63 2.01
2616 2860 7.396623 TCCTTTACAGTCCTTTGGTTTGTAAAA 59.603 33.333 18.59 10.01 39.42 1.52
2617 2861 8.035984 CCTTTACAGTCCTTTGGTTTGTAAAAA 58.964 33.333 18.59 8.71 39.42 1.94
2618 2862 9.594478 CTTTACAGTCCTTTGGTTTGTAAAAAT 57.406 29.630 18.59 0.00 39.42 1.82
2621 2865 8.528044 ACAGTCCTTTGGTTTGTAAAAATAGA 57.472 30.769 0.00 0.00 0.00 1.98
2622 2866 8.973182 ACAGTCCTTTGGTTTGTAAAAATAGAA 58.027 29.630 0.00 0.00 0.00 2.10
2623 2867 9.981114 CAGTCCTTTGGTTTGTAAAAATAGAAT 57.019 29.630 0.00 0.00 0.00 2.40
2625 2869 9.419297 GTCCTTTGGTTTGTAAAAATAGAATCC 57.581 33.333 0.00 0.00 0.00 3.01
2626 2870 9.374711 TCCTTTGGTTTGTAAAAATAGAATCCT 57.625 29.630 0.00 0.00 0.00 3.24
2627 2871 9.423061 CCTTTGGTTTGTAAAAATAGAATCCTG 57.577 33.333 0.00 0.00 0.00 3.86
2628 2872 9.981114 CTTTGGTTTGTAAAAATAGAATCCTGT 57.019 29.630 0.00 0.00 0.00 4.00
2630 2874 9.974980 TTGGTTTGTAAAAATAGAATCCTGTTC 57.025 29.630 0.00 0.00 0.00 3.18
2631 2875 8.581578 TGGTTTGTAAAAATAGAATCCTGTTCC 58.418 33.333 0.00 0.00 0.00 3.62
2632 2876 8.803235 GGTTTGTAAAAATAGAATCCTGTTCCT 58.197 33.333 0.00 0.00 0.00 3.36
2636 2880 9.627123 TGTAAAAATAGAATCCTGTTCCTATGG 57.373 33.333 0.00 0.00 0.00 2.74
2637 2881 9.847224 GTAAAAATAGAATCCTGTTCCTATGGA 57.153 33.333 0.00 0.00 0.00 3.41
2638 2882 8.986929 AAAAATAGAATCCTGTTCCTATGGAG 57.013 34.615 0.00 0.00 32.95 3.86
2639 2883 6.694445 AATAGAATCCTGTTCCTATGGAGG 57.306 41.667 0.00 0.00 45.35 4.30
2698 2942 4.939052 AACAATACCCTAGACTCGATGG 57.061 45.455 0.00 0.00 0.00 3.51
2699 2943 4.180377 ACAATACCCTAGACTCGATGGA 57.820 45.455 0.00 0.00 0.00 3.41
2700 2944 4.543689 ACAATACCCTAGACTCGATGGAA 58.456 43.478 0.00 0.00 0.00 3.53
2701 2945 4.960469 ACAATACCCTAGACTCGATGGAAA 59.040 41.667 0.00 0.00 0.00 3.13
2702 2946 5.424252 ACAATACCCTAGACTCGATGGAAAA 59.576 40.000 0.00 0.00 0.00 2.29
2703 2947 6.070424 ACAATACCCTAGACTCGATGGAAAAA 60.070 38.462 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.436998 GACGGCCCAGTCGACAGG 62.437 72.222 19.47 19.47 33.65 4.00
2 3 4.436998 GGACGGCCCAGTCGACAG 62.437 72.222 19.50 10.04 41.81 3.51
21 22 0.179092 ATTACTGCTAACGGCGACCC 60.179 55.000 16.62 0.00 45.43 4.46
34 35 4.693566 TGGTCAAAGCCGAGTTAATTACTG 59.306 41.667 0.00 0.00 37.17 2.74
36 37 5.616488 TTGGTCAAAGCCGAGTTAATTAC 57.384 39.130 0.00 0.00 0.00 1.89
67 68 4.222114 GCTGGATGCGAGTTATTAATTGC 58.778 43.478 0.00 0.00 0.00 3.56
86 87 2.038426 TCTCCCTCTCTCTATCTCGCTG 59.962 54.545 0.00 0.00 0.00 5.18
87 88 2.303022 CTCTCCCTCTCTCTATCTCGCT 59.697 54.545 0.00 0.00 0.00 4.93
88 89 2.301870 TCTCTCCCTCTCTCTATCTCGC 59.698 54.545 0.00 0.00 0.00 5.03
89 90 3.832490 TCTCTCTCCCTCTCTCTATCTCG 59.168 52.174 0.00 0.00 0.00 4.04
91 92 4.832492 ACTCTCTCTCCCTCTCTCTATCT 58.168 47.826 0.00 0.00 0.00 1.98
92 93 4.322049 CGACTCTCTCTCCCTCTCTCTATC 60.322 54.167 0.00 0.00 0.00 2.08
93 94 3.578716 CGACTCTCTCTCCCTCTCTCTAT 59.421 52.174 0.00 0.00 0.00 1.98
94 95 2.963101 CGACTCTCTCTCCCTCTCTCTA 59.037 54.545 0.00 0.00 0.00 2.43
97 98 0.180406 GCGACTCTCTCTCCCTCTCT 59.820 60.000 0.00 0.00 0.00 3.10
109 110 5.871834 ACTAGAGTATGAATAGGCGACTCT 58.128 41.667 0.00 7.87 46.52 3.24
126 134 6.183360 GGGGAAGAAGATGACAAGTACTAGAG 60.183 46.154 0.00 0.00 0.00 2.43
129 137 4.401519 CGGGGAAGAAGATGACAAGTACTA 59.598 45.833 0.00 0.00 0.00 1.82
130 138 3.195825 CGGGGAAGAAGATGACAAGTACT 59.804 47.826 0.00 0.00 0.00 2.73
131 139 3.194968 TCGGGGAAGAAGATGACAAGTAC 59.805 47.826 0.00 0.00 0.00 2.73
132 140 3.437213 TCGGGGAAGAAGATGACAAGTA 58.563 45.455 0.00 0.00 0.00 2.24
133 141 2.257207 TCGGGGAAGAAGATGACAAGT 58.743 47.619 0.00 0.00 0.00 3.16
136 144 4.892788 AAGCTTCGGGGAAGAAGATGACA 61.893 47.826 9.43 0.00 44.90 3.58
137 145 2.355209 AAGCTTCGGGGAAGAAGATGAC 60.355 50.000 9.43 0.00 44.90 3.06
139 147 2.093235 AGAAGCTTCGGGGAAGAAGATG 60.093 50.000 20.43 0.00 44.90 2.90
145 175 0.458716 GACGAGAAGCTTCGGGGAAG 60.459 60.000 20.43 11.46 44.57 3.46
453 484 4.168291 CTCCTCTCCCCGCAAGCC 62.168 72.222 0.00 0.00 0.00 4.35
454 485 4.847444 GCTCCTCTCCCCGCAAGC 62.847 72.222 0.00 0.00 0.00 4.01
455 486 2.585791 GAAGCTCCTCTCCCCGCAAG 62.586 65.000 0.00 0.00 0.00 4.01
456 487 2.607750 AAGCTCCTCTCCCCGCAA 60.608 61.111 0.00 0.00 0.00 4.85
457 488 3.077556 GAAGCTCCTCTCCCCGCA 61.078 66.667 0.00 0.00 0.00 5.69
458 489 2.762043 AGAAGCTCCTCTCCCCGC 60.762 66.667 0.00 0.00 0.00 6.13
503 534 4.395583 GAGCAGCAGCCGCACAAC 62.396 66.667 2.79 0.00 43.56 3.32
504 535 4.933563 TGAGCAGCAGCCGCACAA 62.934 61.111 2.79 0.00 43.56 3.33
510 555 0.654683 CTAAATCGTGAGCAGCAGCC 59.345 55.000 0.00 0.00 43.56 4.85
513 558 3.735208 GCTAGACTAAATCGTGAGCAGCA 60.735 47.826 0.00 0.00 34.40 4.41
516 561 3.444034 AGTGCTAGACTAAATCGTGAGCA 59.556 43.478 0.00 0.00 38.98 4.26
520 565 3.549471 CAGCAGTGCTAGACTAAATCGTG 59.451 47.826 19.26 0.00 36.40 4.35
549 594 4.813526 CTCCGACGACGACAGCGG 62.814 72.222 9.28 9.23 44.83 5.52
550 595 3.978867 GACTCCGACGACGACAGCG 62.979 68.421 9.28 0.00 42.66 5.18
552 597 2.096030 CGACTCCGACGACGACAG 59.904 66.667 9.28 6.75 42.66 3.51
553 598 4.081030 GCGACTCCGACGACGACA 62.081 66.667 9.28 0.00 42.66 4.35
554 599 3.786586 AGCGACTCCGACGACGAC 61.787 66.667 9.28 0.00 42.66 4.34
581 626 4.681978 AAGACGGGACCGCAGCAC 62.682 66.667 11.21 0.00 44.19 4.40
582 627 4.680237 CAAGACGGGACCGCAGCA 62.680 66.667 11.21 0.00 44.19 4.41
583 628 4.681978 ACAAGACGGGACCGCAGC 62.682 66.667 11.21 0.64 44.19 5.25
584 629 2.738521 CACAAGACGGGACCGCAG 60.739 66.667 11.21 0.88 44.19 5.18
585 630 4.980805 GCACAAGACGGGACCGCA 62.981 66.667 11.21 0.00 44.19 5.69
587 632 4.657824 ACGCACAAGACGGGACCG 62.658 66.667 9.56 9.56 46.03 4.79
588 633 2.280592 AACGCACAAGACGGGACC 60.281 61.111 0.00 0.00 34.00 4.46
589 634 2.935955 CAACGCACAAGACGGGAC 59.064 61.111 0.00 0.00 34.00 4.46
590 635 2.933878 AAGCAACGCACAAGACGGGA 62.934 55.000 0.00 0.00 34.00 5.14
591 636 2.058829 AAAGCAACGCACAAGACGGG 62.059 55.000 0.00 0.00 34.00 5.28
592 637 0.929824 CAAAGCAACGCACAAGACGG 60.930 55.000 0.00 0.00 34.00 4.79
593 638 1.531522 GCAAAGCAACGCACAAGACG 61.532 55.000 0.00 0.00 0.00 4.18
594 639 0.248621 AGCAAAGCAACGCACAAGAC 60.249 50.000 0.00 0.00 0.00 3.01
595 640 0.248580 CAGCAAAGCAACGCACAAGA 60.249 50.000 0.00 0.00 0.00 3.02
596 641 1.210545 CCAGCAAAGCAACGCACAAG 61.211 55.000 0.00 0.00 0.00 3.16
597 642 1.226916 CCAGCAAAGCAACGCACAA 60.227 52.632 0.00 0.00 0.00 3.33
598 643 2.412525 CCAGCAAAGCAACGCACA 59.587 55.556 0.00 0.00 0.00 4.57
599 644 1.945662 CACCAGCAAAGCAACGCAC 60.946 57.895 0.00 0.00 0.00 5.34
600 645 2.412525 CACCAGCAAAGCAACGCA 59.587 55.556 0.00 0.00 0.00 5.24
601 646 1.945662 CACACCAGCAAAGCAACGC 60.946 57.895 0.00 0.00 0.00 4.84
602 647 0.866906 CACACACCAGCAAAGCAACG 60.867 55.000 0.00 0.00 0.00 4.10
603 648 0.528249 CCACACACCAGCAAAGCAAC 60.528 55.000 0.00 0.00 0.00 4.17
604 649 1.815196 CCACACACCAGCAAAGCAA 59.185 52.632 0.00 0.00 0.00 3.91
605 650 2.784356 GCCACACACCAGCAAAGCA 61.784 57.895 0.00 0.00 0.00 3.91
606 651 2.028043 GCCACACACCAGCAAAGC 59.972 61.111 0.00 0.00 0.00 3.51
607 652 2.730094 GGCCACACACCAGCAAAG 59.270 61.111 0.00 0.00 0.00 2.77
608 653 3.215568 CGGCCACACACCAGCAAA 61.216 61.111 2.24 0.00 0.00 3.68
609 654 4.182433 TCGGCCACACACCAGCAA 62.182 61.111 2.24 0.00 0.00 3.91
616 661 1.830587 ATCTGAAGCTCGGCCACACA 61.831 55.000 2.24 0.00 0.00 3.72
618 663 1.219124 GATCTGAAGCTCGGCCACA 59.781 57.895 2.24 0.00 0.00 4.17
630 675 1.223501 ACCCTCCCTACGAGATCTGA 58.776 55.000 0.00 0.00 41.63 3.27
674 742 5.050490 GCGAATCTAGTAGAAGCATTGGAA 58.950 41.667 16.09 0.00 0.00 3.53
683 751 3.488721 GGAGCAACGCGAATCTAGTAGAA 60.489 47.826 15.93 0.00 0.00 2.10
686 754 2.022195 AGGAGCAACGCGAATCTAGTA 58.978 47.619 15.93 0.00 0.00 1.82
696 764 1.520342 CTAGCAGGAGGAGCAACGC 60.520 63.158 0.00 0.00 0.00 4.84
697 765 0.179124 GACTAGCAGGAGGAGCAACG 60.179 60.000 0.00 0.00 0.00 4.10
755 854 7.122948 ACAGGATTAGAGTAAGATTTCTCGTGT 59.877 37.037 0.00 0.00 36.03 4.49
761 860 8.697292 ACAGGTACAGGATTAGAGTAAGATTTC 58.303 37.037 0.00 0.00 0.00 2.17
762 861 8.611051 ACAGGTACAGGATTAGAGTAAGATTT 57.389 34.615 0.00 0.00 0.00 2.17
763 862 9.357161 CTACAGGTACAGGATTAGAGTAAGATT 57.643 37.037 0.00 0.00 0.00 2.40
764 863 8.725256 TCTACAGGTACAGGATTAGAGTAAGAT 58.275 37.037 0.00 0.00 0.00 2.40
765 864 8.098963 TCTACAGGTACAGGATTAGAGTAAGA 57.901 38.462 0.00 0.00 0.00 2.10
768 867 9.389949 TCTATCTACAGGTACAGGATTAGAGTA 57.610 37.037 0.00 0.00 0.00 2.59
770 869 9.747898 AATCTATCTACAGGTACAGGATTAGAG 57.252 37.037 0.00 0.00 0.00 2.43
776 885 8.603898 TGAAAAATCTATCTACAGGTACAGGA 57.396 34.615 0.00 0.00 0.00 3.86
780 889 8.019656 TCCCTGAAAAATCTATCTACAGGTAC 57.980 38.462 0.00 0.00 40.92 3.34
788 897 7.164803 GGATCGAATCCCTGAAAAATCTATCT 58.835 38.462 0.00 0.00 43.88 1.98
816 1013 3.257469 TGTGCAGCTATCTTCTCAAGG 57.743 47.619 0.00 0.00 0.00 3.61
870 1067 2.293677 AATTGCAGCGTATCTCGACA 57.706 45.000 0.00 0.00 42.86 4.35
909 1106 3.884693 TCATCAGCAACTCAACAACACAT 59.115 39.130 0.00 0.00 0.00 3.21
948 1145 2.034879 CCCACGACGAGCTGCAAAT 61.035 57.895 0.00 0.00 0.00 2.32
949 1146 2.664851 CCCACGACGAGCTGCAAA 60.665 61.111 0.00 0.00 0.00 3.68
1365 1565 1.536644 TGAACCAGGGGTTAGGGTTT 58.463 50.000 0.00 0.00 46.95 3.27
1425 1625 0.037605 CGGCCGAGAAGGTGTAGTTT 60.038 55.000 24.07 0.00 43.70 2.66
1557 1763 2.360767 GCCATGGAAAGCATGCCCA 61.361 57.895 18.40 15.48 0.00 5.36
1656 1868 1.005215 AGAAAGCCAACCAGGATGAGG 59.995 52.381 0.00 0.00 39.69 3.86
1686 1898 4.376146 GAACCTAGAATGTGATGAGGCTC 58.624 47.826 7.79 7.79 0.00 4.70
1755 1977 5.583854 GCACACAACATCTGAGAAGTATCAT 59.416 40.000 0.00 0.00 0.00 2.45
1796 2019 0.532115 TTAGACCGGGGCTTTCGTAC 59.468 55.000 8.24 0.00 0.00 3.67
1800 2023 2.093128 TCAGATTTAGACCGGGGCTTTC 60.093 50.000 8.24 3.15 0.00 2.62
1857 2080 7.648112 CCGCGTCTAAATAGCACATATATACAT 59.352 37.037 4.92 0.00 0.00 2.29
1897 2120 2.205022 ACTACTACGGTACACAGGCA 57.795 50.000 0.00 0.00 0.00 4.75
1920 2143 5.003160 TCCAAATCATTCACGAATCAGTGT 58.997 37.500 0.00 0.00 42.40 3.55
1922 2145 6.381801 GTTTCCAAATCATTCACGAATCAGT 58.618 36.000 0.00 0.00 0.00 3.41
1931 2154 6.462768 CCAAACAGAGGTTTCCAAATCATTCA 60.463 38.462 0.00 0.00 45.18 2.57
1996 2222 3.194861 CCACTCACTTTGACAGTCGAAA 58.805 45.455 4.71 2.15 30.92 3.46
2007 2233 0.474184 CTGGACACCCCACTCACTTT 59.526 55.000 0.00 0.00 40.82 2.66
2023 2250 3.118112 AGACATGGACTCCAAATAGCTGG 60.118 47.826 0.66 0.00 36.95 4.85
2047 2278 6.926313 ACAATACAGTACAGAAGAGGAAGAC 58.074 40.000 0.00 0.00 0.00 3.01
2064 2295 5.871465 TCGCAAAGCATCTTAACAATACA 57.129 34.783 0.00 0.00 0.00 2.29
2065 2296 6.486248 TCATCGCAAAGCATCTTAACAATAC 58.514 36.000 0.00 0.00 0.00 1.89
2068 2299 5.334319 CATCATCGCAAAGCATCTTAACAA 58.666 37.500 0.00 0.00 0.00 2.83
2075 2306 0.666913 AGCCATCATCGCAAAGCATC 59.333 50.000 0.00 0.00 0.00 3.91
2087 2318 3.771479 ACATGAGAGAGTTACAGCCATCA 59.229 43.478 0.00 0.00 0.00 3.07
2102 2333 6.345096 TCTAACATGAACACTGACATGAGA 57.655 37.500 19.56 13.25 44.28 3.27
2103 2334 7.606858 ATTCTAACATGAACACTGACATGAG 57.393 36.000 19.56 11.89 44.28 2.90
2148 2382 9.712305 TTTTACAGTCAAACCAAAATTGAGAAA 57.288 25.926 0.00 0.00 37.46 2.52
2150 2384 9.883142 ATTTTTACAGTCAAACCAAAATTGAGA 57.117 25.926 0.00 0.00 37.46 3.27
2151 2385 9.919348 CATTTTTACAGTCAAACCAAAATTGAG 57.081 29.630 0.00 0.00 37.46 3.02
2152 2386 9.658799 TCATTTTTACAGTCAAACCAAAATTGA 57.341 25.926 0.00 0.00 34.56 2.57
2153 2387 9.919348 CTCATTTTTACAGTCAAACCAAAATTG 57.081 29.630 0.00 0.00 0.00 2.32
2182 2425 5.056480 TGGATTCTAAATCACTGCATACCG 58.944 41.667 0.00 0.00 0.00 4.02
2186 2430 4.280174 GGCATGGATTCTAAATCACTGCAT 59.720 41.667 18.87 5.99 32.28 3.96
2190 2434 6.894103 AGAAAAGGCATGGATTCTAAATCACT 59.106 34.615 0.00 0.00 30.69 3.41
2192 2436 7.121382 AGAGAAAAGGCATGGATTCTAAATCA 58.879 34.615 0.00 0.00 32.54 2.57
2193 2437 7.579761 AGAGAAAAGGCATGGATTCTAAATC 57.420 36.000 0.00 0.00 32.54 2.17
2201 2445 4.081807 GCAGAAAAGAGAAAAGGCATGGAT 60.082 41.667 0.00 0.00 0.00 3.41
2204 2448 4.247267 TGCAGAAAAGAGAAAAGGCATG 57.753 40.909 0.00 0.00 0.00 4.06
2207 2451 7.895975 ATAAATTGCAGAAAAGAGAAAAGGC 57.104 32.000 0.00 0.00 0.00 4.35
2228 2472 9.537192 CACCGACTGTAAAAAGACCATATATAA 57.463 33.333 0.00 0.00 0.00 0.98
2229 2473 8.145767 CCACCGACTGTAAAAAGACCATATATA 58.854 37.037 0.00 0.00 0.00 0.86
2230 2474 6.990349 CCACCGACTGTAAAAAGACCATATAT 59.010 38.462 0.00 0.00 0.00 0.86
2231 2475 6.070653 ACCACCGACTGTAAAAAGACCATATA 60.071 38.462 0.00 0.00 0.00 0.86
2232 2476 5.183228 CCACCGACTGTAAAAAGACCATAT 58.817 41.667 0.00 0.00 0.00 1.78
2233 2477 4.040706 ACCACCGACTGTAAAAAGACCATA 59.959 41.667 0.00 0.00 0.00 2.74
2234 2478 3.181448 ACCACCGACTGTAAAAAGACCAT 60.181 43.478 0.00 0.00 0.00 3.55
2235 2479 2.171027 ACCACCGACTGTAAAAAGACCA 59.829 45.455 0.00 0.00 0.00 4.02
2236 2480 2.842457 ACCACCGACTGTAAAAAGACC 58.158 47.619 0.00 0.00 0.00 3.85
2237 2481 4.888038 AAACCACCGACTGTAAAAAGAC 57.112 40.909 0.00 0.00 0.00 3.01
2238 2482 7.571080 AATTAAACCACCGACTGTAAAAAGA 57.429 32.000 0.00 0.00 0.00 2.52
2239 2483 9.337091 CATAATTAAACCACCGACTGTAAAAAG 57.663 33.333 0.00 0.00 0.00 2.27
2240 2484 9.064706 TCATAATTAAACCACCGACTGTAAAAA 57.935 29.630 0.00 0.00 0.00 1.94
2241 2485 8.618702 TCATAATTAAACCACCGACTGTAAAA 57.381 30.769 0.00 0.00 0.00 1.52
2242 2486 8.795842 ATCATAATTAAACCACCGACTGTAAA 57.204 30.769 0.00 0.00 0.00 2.01
2243 2487 8.795842 AATCATAATTAAACCACCGACTGTAA 57.204 30.769 0.00 0.00 0.00 2.41
2244 2488 7.496591 GGAATCATAATTAAACCACCGACTGTA 59.503 37.037 0.00 0.00 0.00 2.74
2245 2489 6.317893 GGAATCATAATTAAACCACCGACTGT 59.682 38.462 0.00 0.00 0.00 3.55
2246 2490 6.511121 CGGAATCATAATTAAACCACCGACTG 60.511 42.308 14.22 0.00 39.11 3.51
2247 2491 5.526111 CGGAATCATAATTAAACCACCGACT 59.474 40.000 14.22 0.00 39.11 4.18
2248 2492 5.277634 CCGGAATCATAATTAAACCACCGAC 60.278 44.000 18.37 0.00 39.11 4.79
2249 2493 4.817464 CCGGAATCATAATTAAACCACCGA 59.183 41.667 18.37 0.00 39.11 4.69
2250 2494 4.023536 CCCGGAATCATAATTAAACCACCG 60.024 45.833 0.73 13.14 37.02 4.94
2251 2495 4.891168 ACCCGGAATCATAATTAAACCACC 59.109 41.667 0.73 0.00 0.00 4.61
2252 2496 5.277634 CGACCCGGAATCATAATTAAACCAC 60.278 44.000 0.73 0.00 0.00 4.16
2253 2497 4.817464 CGACCCGGAATCATAATTAAACCA 59.183 41.667 0.73 0.00 0.00 3.67
2254 2498 5.058490 TCGACCCGGAATCATAATTAAACC 58.942 41.667 0.73 0.00 0.00 3.27
2255 2499 6.607735 TTCGACCCGGAATCATAATTAAAC 57.392 37.500 0.73 0.00 0.00 2.01
2256 2500 6.993308 TCATTCGACCCGGAATCATAATTAAA 59.007 34.615 0.73 0.00 34.50 1.52
2257 2501 6.526526 TCATTCGACCCGGAATCATAATTAA 58.473 36.000 0.73 0.00 34.50 1.40
2258 2502 6.104146 TCATTCGACCCGGAATCATAATTA 57.896 37.500 0.73 0.00 34.50 1.40
2259 2503 4.968259 TCATTCGACCCGGAATCATAATT 58.032 39.130 0.73 0.00 34.50 1.40
2260 2504 4.617253 TCATTCGACCCGGAATCATAAT 57.383 40.909 0.73 0.36 34.50 1.28
2261 2505 4.617253 ATCATTCGACCCGGAATCATAA 57.383 40.909 0.73 0.00 34.50 1.90
2262 2506 4.039852 TGAATCATTCGACCCGGAATCATA 59.960 41.667 0.73 0.00 34.50 2.15
2263 2507 3.181455 TGAATCATTCGACCCGGAATCAT 60.181 43.478 0.73 0.00 34.50 2.45
2264 2508 2.169561 TGAATCATTCGACCCGGAATCA 59.830 45.455 0.73 0.00 34.50 2.57
2265 2509 2.833794 TGAATCATTCGACCCGGAATC 58.166 47.619 0.73 0.00 34.50 2.52
2266 2510 3.141398 CATGAATCATTCGACCCGGAAT 58.859 45.455 0.73 0.00 37.11 3.01
2267 2511 2.093181 ACATGAATCATTCGACCCGGAA 60.093 45.455 0.73 0.00 0.00 4.30
2268 2512 1.484653 ACATGAATCATTCGACCCGGA 59.515 47.619 0.73 0.00 0.00 5.14
2269 2513 1.867233 GACATGAATCATTCGACCCGG 59.133 52.381 0.00 0.00 0.00 5.73
2270 2514 1.522676 CGACATGAATCATTCGACCCG 59.477 52.381 16.84 0.00 31.44 5.28
2271 2515 1.261619 GCGACATGAATCATTCGACCC 59.738 52.381 22.28 8.79 31.44 4.46
2272 2516 1.261619 GGCGACATGAATCATTCGACC 59.738 52.381 22.28 18.97 31.45 4.79
2273 2517 1.071239 CGGCGACATGAATCATTCGAC 60.071 52.381 22.28 19.95 32.98 4.20
2274 2518 1.208259 CGGCGACATGAATCATTCGA 58.792 50.000 22.28 0.00 31.44 3.71
2275 2519 0.383491 GCGGCGACATGAATCATTCG 60.383 55.000 12.98 17.22 32.25 3.34
2276 2520 0.383491 CGCGGCGACATGAATCATTC 60.383 55.000 19.16 0.00 0.00 2.67
2277 2521 1.643292 CGCGGCGACATGAATCATT 59.357 52.632 19.16 0.00 0.00 2.57
2278 2522 2.246739 CCGCGGCGACATGAATCAT 61.247 57.895 25.92 0.00 0.00 2.45
2279 2523 2.889988 CCGCGGCGACATGAATCA 60.890 61.111 25.92 0.00 0.00 2.57
2280 2524 2.461110 AACCGCGGCGACATGAATC 61.461 57.895 28.58 0.00 0.00 2.52
2281 2525 2.435938 AACCGCGGCGACATGAAT 60.436 55.556 28.58 0.00 0.00 2.57
2282 2526 3.418913 CAACCGCGGCGACATGAA 61.419 61.111 28.58 0.00 0.00 2.57
2299 2543 2.292103 TGAAACAAAGTTGCACCTGC 57.708 45.000 0.00 0.00 42.50 4.85
2300 2544 5.220643 GGAAAATGAAACAAAGTTGCACCTG 60.221 40.000 0.00 0.00 0.00 4.00
2301 2545 4.875536 GGAAAATGAAACAAAGTTGCACCT 59.124 37.500 0.00 0.00 0.00 4.00
2302 2546 4.633565 TGGAAAATGAAACAAAGTTGCACC 59.366 37.500 0.00 0.00 0.00 5.01
2303 2547 5.793026 TGGAAAATGAAACAAAGTTGCAC 57.207 34.783 0.00 0.00 0.00 4.57
2304 2548 5.353678 CCTTGGAAAATGAAACAAAGTTGCA 59.646 36.000 0.00 0.00 0.00 4.08
2305 2549 5.353956 ACCTTGGAAAATGAAACAAAGTTGC 59.646 36.000 0.00 0.00 0.00 4.17
2306 2550 6.037062 GGACCTTGGAAAATGAAACAAAGTTG 59.963 38.462 0.00 0.00 0.00 3.16
2307 2551 6.070251 AGGACCTTGGAAAATGAAACAAAGTT 60.070 34.615 0.00 0.00 0.00 2.66
2308 2552 5.425217 AGGACCTTGGAAAATGAAACAAAGT 59.575 36.000 0.00 0.00 0.00 2.66
2309 2553 5.754890 CAGGACCTTGGAAAATGAAACAAAG 59.245 40.000 0.00 0.00 0.00 2.77
2310 2554 5.188751 ACAGGACCTTGGAAAATGAAACAAA 59.811 36.000 0.00 0.00 0.00 2.83
2311 2555 4.714308 ACAGGACCTTGGAAAATGAAACAA 59.286 37.500 0.00 0.00 0.00 2.83
2312 2556 4.099266 CACAGGACCTTGGAAAATGAAACA 59.901 41.667 0.00 0.00 0.00 2.83
2313 2557 4.099419 ACACAGGACCTTGGAAAATGAAAC 59.901 41.667 0.00 0.00 0.00 2.78
2314 2558 4.285863 ACACAGGACCTTGGAAAATGAAA 58.714 39.130 0.00 0.00 0.00 2.69
2315 2559 3.909732 ACACAGGACCTTGGAAAATGAA 58.090 40.909 0.00 0.00 0.00 2.57
2316 2560 3.593442 ACACAGGACCTTGGAAAATGA 57.407 42.857 0.00 0.00 0.00 2.57
2317 2561 4.380867 GCATACACAGGACCTTGGAAAATG 60.381 45.833 0.00 0.00 0.00 2.32
2318 2562 3.763897 GCATACACAGGACCTTGGAAAAT 59.236 43.478 0.00 0.00 0.00 1.82
2319 2563 3.153919 GCATACACAGGACCTTGGAAAA 58.846 45.455 0.00 0.00 0.00 2.29
2320 2564 2.107378 TGCATACACAGGACCTTGGAAA 59.893 45.455 0.00 0.00 0.00 3.13
2321 2565 1.702401 TGCATACACAGGACCTTGGAA 59.298 47.619 0.00 0.00 0.00 3.53
2322 2566 1.357137 TGCATACACAGGACCTTGGA 58.643 50.000 0.00 0.00 0.00 3.53
2323 2567 2.425143 ATGCATACACAGGACCTTGG 57.575 50.000 0.00 0.00 0.00 3.61
2324 2568 4.380867 GGAAAATGCATACACAGGACCTTG 60.381 45.833 0.00 0.00 0.00 3.61
2325 2569 3.763897 GGAAAATGCATACACAGGACCTT 59.236 43.478 0.00 0.00 0.00 3.50
2326 2570 3.356290 GGAAAATGCATACACAGGACCT 58.644 45.455 0.00 0.00 0.00 3.85
2327 2571 2.097466 CGGAAAATGCATACACAGGACC 59.903 50.000 0.00 0.00 0.00 4.46
2328 2572 2.097466 CCGGAAAATGCATACACAGGAC 59.903 50.000 0.00 0.00 0.00 3.85
2329 2573 2.290641 ACCGGAAAATGCATACACAGGA 60.291 45.455 9.46 0.00 0.00 3.86
2330 2574 2.091541 ACCGGAAAATGCATACACAGG 58.908 47.619 9.46 7.06 0.00 4.00
2331 2575 3.009723 AGACCGGAAAATGCATACACAG 58.990 45.455 9.46 0.00 0.00 3.66
2332 2576 3.066291 AGACCGGAAAATGCATACACA 57.934 42.857 9.46 0.00 0.00 3.72
2333 2577 3.438781 TCAAGACCGGAAAATGCATACAC 59.561 43.478 9.46 0.00 0.00 2.90
2334 2578 3.680490 TCAAGACCGGAAAATGCATACA 58.320 40.909 9.46 0.00 0.00 2.29
2335 2579 4.083003 TGTTCAAGACCGGAAAATGCATAC 60.083 41.667 9.46 0.00 0.00 2.39
2336 2580 4.075682 TGTTCAAGACCGGAAAATGCATA 58.924 39.130 9.46 0.00 0.00 3.14
2337 2581 2.890311 TGTTCAAGACCGGAAAATGCAT 59.110 40.909 9.46 0.00 0.00 3.96
2338 2582 2.293122 CTGTTCAAGACCGGAAAATGCA 59.707 45.455 9.46 0.00 0.00 3.96
2339 2583 2.293399 ACTGTTCAAGACCGGAAAATGC 59.707 45.455 9.46 0.00 0.00 3.56
2340 2584 3.815401 AGACTGTTCAAGACCGGAAAATG 59.185 43.478 9.46 1.17 0.00 2.32
2341 2585 3.815401 CAGACTGTTCAAGACCGGAAAAT 59.185 43.478 9.46 0.00 0.00 1.82
2342 2586 3.118555 TCAGACTGTTCAAGACCGGAAAA 60.119 43.478 9.46 0.00 0.00 2.29
2343 2587 2.432874 TCAGACTGTTCAAGACCGGAAA 59.567 45.455 9.46 0.00 0.00 3.13
2344 2588 2.036387 TCAGACTGTTCAAGACCGGAA 58.964 47.619 9.46 0.00 0.00 4.30
2345 2589 1.699730 TCAGACTGTTCAAGACCGGA 58.300 50.000 9.46 0.00 0.00 5.14
2346 2590 2.135933 GTTCAGACTGTTCAAGACCGG 58.864 52.381 0.00 0.00 0.00 5.28
2347 2591 2.821546 TGTTCAGACTGTTCAAGACCG 58.178 47.619 1.59 0.00 0.00 4.79
2348 2592 4.450419 CAGATGTTCAGACTGTTCAAGACC 59.550 45.833 1.59 0.00 0.00 3.85
2349 2593 4.450419 CCAGATGTTCAGACTGTTCAAGAC 59.550 45.833 1.59 1.21 0.00 3.01
2350 2594 4.503817 CCCAGATGTTCAGACTGTTCAAGA 60.504 45.833 1.59 0.00 0.00 3.02
2351 2595 3.750130 CCCAGATGTTCAGACTGTTCAAG 59.250 47.826 1.59 0.00 0.00 3.02
2352 2596 3.496692 CCCCAGATGTTCAGACTGTTCAA 60.497 47.826 1.59 0.00 0.00 2.69
2353 2597 2.038952 CCCCAGATGTTCAGACTGTTCA 59.961 50.000 1.59 3.80 0.00 3.18
2354 2598 2.303022 TCCCCAGATGTTCAGACTGTTC 59.697 50.000 1.59 0.00 0.00 3.18
2355 2599 2.338809 TCCCCAGATGTTCAGACTGTT 58.661 47.619 1.59 0.00 0.00 3.16
2356 2600 2.030027 TCCCCAGATGTTCAGACTGT 57.970 50.000 1.59 0.00 0.00 3.55
2357 2601 2.158842 GGATCCCCAGATGTTCAGACTG 60.159 54.545 0.00 0.00 30.90 3.51
2358 2602 2.122768 GGATCCCCAGATGTTCAGACT 58.877 52.381 0.00 0.00 30.90 3.24
2359 2603 1.202580 CGGATCCCCAGATGTTCAGAC 60.203 57.143 6.06 0.00 30.90 3.51
2360 2604 1.123077 CGGATCCCCAGATGTTCAGA 58.877 55.000 6.06 0.00 30.90 3.27
2361 2605 0.107456 CCGGATCCCCAGATGTTCAG 59.893 60.000 6.06 0.00 30.90 3.02
2362 2606 1.983119 GCCGGATCCCCAGATGTTCA 61.983 60.000 5.05 0.00 30.90 3.18
2363 2607 1.227973 GCCGGATCCCCAGATGTTC 60.228 63.158 5.05 0.00 30.90 3.18
2364 2608 2.919043 GCCGGATCCCCAGATGTT 59.081 61.111 5.05 0.00 30.90 2.71
2365 2609 3.550431 CGCCGGATCCCCAGATGT 61.550 66.667 5.05 0.00 30.90 3.06
2366 2610 3.521529 GACGCCGGATCCCCAGATG 62.522 68.421 5.05 0.00 30.90 2.90
2367 2611 3.234730 GACGCCGGATCCCCAGAT 61.235 66.667 5.05 0.00 34.57 2.90
2371 2615 4.664677 CATCGACGCCGGATCCCC 62.665 72.222 5.05 0.00 36.24 4.81
2372 2616 3.441011 AACATCGACGCCGGATCCC 62.441 63.158 5.05 0.00 36.24 3.85
2373 2617 2.106332 AACATCGACGCCGGATCC 59.894 61.111 5.05 0.00 36.24 3.36
2374 2618 1.518572 ACAACATCGACGCCGGATC 60.519 57.895 5.05 0.00 36.24 3.36
2375 2619 1.809619 CACAACATCGACGCCGGAT 60.810 57.895 5.05 0.00 36.24 4.18
2376 2620 2.431771 CACAACATCGACGCCGGA 60.432 61.111 5.05 0.00 36.24 5.14
2377 2621 2.431771 TCACAACATCGACGCCGG 60.432 61.111 0.00 0.00 36.24 6.13
2378 2622 1.674611 GACTCACAACATCGACGCCG 61.675 60.000 0.00 0.00 37.07 6.46
2379 2623 1.352156 GGACTCACAACATCGACGCC 61.352 60.000 0.00 0.00 0.00 5.68
2380 2624 0.666274 TGGACTCACAACATCGACGC 60.666 55.000 0.00 0.00 0.00 5.19
2381 2625 1.920574 GATGGACTCACAACATCGACG 59.079 52.381 0.00 0.00 32.65 5.12
2382 2626 2.959516 TGATGGACTCACAACATCGAC 58.040 47.619 0.00 0.00 42.91 4.20
2392 2636 2.229792 GCAAAACAGGTGATGGACTCA 58.770 47.619 0.00 0.00 0.00 3.41
2393 2637 2.229792 TGCAAAACAGGTGATGGACTC 58.770 47.619 0.00 0.00 0.00 3.36
2394 2638 2.363306 TGCAAAACAGGTGATGGACT 57.637 45.000 0.00 0.00 0.00 3.85
2395 2639 3.319755 CAATGCAAAACAGGTGATGGAC 58.680 45.455 0.00 0.00 0.00 4.02
2396 2640 2.288948 GCAATGCAAAACAGGTGATGGA 60.289 45.455 0.00 0.00 0.00 3.41
2397 2641 2.070783 GCAATGCAAAACAGGTGATGG 58.929 47.619 0.00 0.00 0.00 3.51
2398 2642 2.070783 GGCAATGCAAAACAGGTGATG 58.929 47.619 7.79 0.00 0.00 3.07
2399 2643 1.972795 AGGCAATGCAAAACAGGTGAT 59.027 42.857 7.79 0.00 0.00 3.06
2400 2644 1.068895 CAGGCAATGCAAAACAGGTGA 59.931 47.619 7.79 0.00 0.00 4.02
2401 2645 1.504359 CAGGCAATGCAAAACAGGTG 58.496 50.000 7.79 0.00 0.00 4.00
2402 2646 0.393820 CCAGGCAATGCAAAACAGGT 59.606 50.000 7.79 0.00 0.00 4.00
2403 2647 0.320946 CCCAGGCAATGCAAAACAGG 60.321 55.000 7.79 0.00 0.00 4.00
2404 2648 0.680618 TCCCAGGCAATGCAAAACAG 59.319 50.000 7.79 0.00 0.00 3.16
2405 2649 0.680618 CTCCCAGGCAATGCAAAACA 59.319 50.000 7.79 0.00 0.00 2.83
2406 2650 0.037046 CCTCCCAGGCAATGCAAAAC 60.037 55.000 7.79 0.00 0.00 2.43
2407 2651 2.364353 CCTCCCAGGCAATGCAAAA 58.636 52.632 7.79 0.00 0.00 2.44
2408 2652 4.116926 CCTCCCAGGCAATGCAAA 57.883 55.556 7.79 0.00 0.00 3.68
2417 2661 3.784178 TCTATCTATCAAGCCTCCCAGG 58.216 50.000 0.00 0.00 38.80 4.45
2418 2662 6.041865 CCATATCTATCTATCAAGCCTCCCAG 59.958 46.154 0.00 0.00 0.00 4.45
2419 2663 5.901853 CCATATCTATCTATCAAGCCTCCCA 59.098 44.000 0.00 0.00 0.00 4.37
2420 2664 5.221621 GCCATATCTATCTATCAAGCCTCCC 60.222 48.000 0.00 0.00 0.00 4.30
2421 2665 5.221621 GGCCATATCTATCTATCAAGCCTCC 60.222 48.000 0.00 0.00 33.86 4.30
2422 2666 5.602145 AGGCCATATCTATCTATCAAGCCTC 59.398 44.000 5.01 0.00 43.28 4.70
2423 2667 5.536951 AGGCCATATCTATCTATCAAGCCT 58.463 41.667 5.01 0.00 42.02 4.58
2424 2668 5.609423 CAGGCCATATCTATCTATCAAGCC 58.391 45.833 5.01 0.00 36.92 4.35
2425 2669 5.055812 GCAGGCCATATCTATCTATCAAGC 58.944 45.833 5.01 0.00 0.00 4.01
2426 2670 6.482898 AGCAGGCCATATCTATCTATCAAG 57.517 41.667 5.01 0.00 0.00 3.02
2427 2671 5.068329 CGAGCAGGCCATATCTATCTATCAA 59.932 44.000 5.01 0.00 0.00 2.57
2428 2672 4.582240 CGAGCAGGCCATATCTATCTATCA 59.418 45.833 5.01 0.00 0.00 2.15
2429 2673 4.022416 CCGAGCAGGCCATATCTATCTATC 60.022 50.000 5.01 0.00 0.00 2.08
2430 2674 3.894427 CCGAGCAGGCCATATCTATCTAT 59.106 47.826 5.01 0.00 0.00 1.98
2431 2675 3.291584 CCGAGCAGGCCATATCTATCTA 58.708 50.000 5.01 0.00 0.00 1.98
2432 2676 2.106566 CCGAGCAGGCCATATCTATCT 58.893 52.381 5.01 0.00 0.00 1.98
2433 2677 2.593346 CCGAGCAGGCCATATCTATC 57.407 55.000 5.01 0.00 0.00 2.08
2444 2688 0.739462 TACAATTGACGCCGAGCAGG 60.739 55.000 13.59 0.00 44.97 4.85
2445 2689 1.004610 CATACAATTGACGCCGAGCAG 60.005 52.381 13.59 0.00 0.00 4.24
2446 2690 1.006086 CATACAATTGACGCCGAGCA 58.994 50.000 13.59 0.00 0.00 4.26
2447 2691 1.286501 TCATACAATTGACGCCGAGC 58.713 50.000 13.59 0.00 0.00 5.03
2448 2692 2.866156 ACATCATACAATTGACGCCGAG 59.134 45.455 13.59 0.00 0.00 4.63
2449 2693 2.899976 ACATCATACAATTGACGCCGA 58.100 42.857 13.59 1.58 0.00 5.54
2450 2694 3.673746 AACATCATACAATTGACGCCG 57.326 42.857 13.59 0.00 0.00 6.46
2451 2695 4.562394 CCAAAACATCATACAATTGACGCC 59.438 41.667 13.59 0.00 0.00 5.68
2452 2696 5.398169 TCCAAAACATCATACAATTGACGC 58.602 37.500 13.59 0.00 0.00 5.19
2453 2697 6.527722 CCTTCCAAAACATCATACAATTGACG 59.472 38.462 13.59 0.00 0.00 4.35
2454 2698 7.601856 TCCTTCCAAAACATCATACAATTGAC 58.398 34.615 13.59 0.00 0.00 3.18
2455 2699 7.773489 TCCTTCCAAAACATCATACAATTGA 57.227 32.000 13.59 0.00 0.00 2.57
2456 2700 9.740239 CTATCCTTCCAAAACATCATACAATTG 57.260 33.333 3.24 3.24 0.00 2.32
2457 2701 8.917088 CCTATCCTTCCAAAACATCATACAATT 58.083 33.333 0.00 0.00 0.00 2.32
2458 2702 8.061304 ACCTATCCTTCCAAAACATCATACAAT 58.939 33.333 0.00 0.00 0.00 2.71
2459 2703 7.410174 ACCTATCCTTCCAAAACATCATACAA 58.590 34.615 0.00 0.00 0.00 2.41
2460 2704 6.969043 ACCTATCCTTCCAAAACATCATACA 58.031 36.000 0.00 0.00 0.00 2.29
2461 2705 7.054124 TGACCTATCCTTCCAAAACATCATAC 58.946 38.462 0.00 0.00 0.00 2.39
2462 2706 7.206789 TGACCTATCCTTCCAAAACATCATA 57.793 36.000 0.00 0.00 0.00 2.15
2463 2707 6.078456 TGACCTATCCTTCCAAAACATCAT 57.922 37.500 0.00 0.00 0.00 2.45
2464 2708 5.512942 TGACCTATCCTTCCAAAACATCA 57.487 39.130 0.00 0.00 0.00 3.07
2465 2709 6.261826 CAGATGACCTATCCTTCCAAAACATC 59.738 42.308 0.00 0.00 36.40 3.06
2466 2710 6.125029 CAGATGACCTATCCTTCCAAAACAT 58.875 40.000 0.00 0.00 36.40 2.71
2467 2711 5.500234 CAGATGACCTATCCTTCCAAAACA 58.500 41.667 0.00 0.00 36.40 2.83
2468 2712 4.884164 CCAGATGACCTATCCTTCCAAAAC 59.116 45.833 0.00 0.00 36.40 2.43
2469 2713 4.628715 GCCAGATGACCTATCCTTCCAAAA 60.629 45.833 0.00 0.00 36.40 2.44
2470 2714 3.117888 GCCAGATGACCTATCCTTCCAAA 60.118 47.826 0.00 0.00 36.40 3.28
2471 2715 2.439507 GCCAGATGACCTATCCTTCCAA 59.560 50.000 0.00 0.00 36.40 3.53
2472 2716 2.050144 GCCAGATGACCTATCCTTCCA 58.950 52.381 0.00 0.00 36.40 3.53
2473 2717 2.038295 CAGCCAGATGACCTATCCTTCC 59.962 54.545 0.00 0.00 36.40 3.46
2474 2718 2.038295 CCAGCCAGATGACCTATCCTTC 59.962 54.545 0.00 0.00 36.40 3.46
2475 2719 2.053244 CCAGCCAGATGACCTATCCTT 58.947 52.381 0.00 0.00 36.40 3.36
2476 2720 1.727062 CCAGCCAGATGACCTATCCT 58.273 55.000 0.00 0.00 36.40 3.24
2477 2721 0.689623 CCCAGCCAGATGACCTATCC 59.310 60.000 0.00 0.00 36.40 2.59
2478 2722 1.622811 CTCCCAGCCAGATGACCTATC 59.377 57.143 0.00 0.00 35.97 2.08
2479 2723 1.221523 TCTCCCAGCCAGATGACCTAT 59.778 52.381 0.00 0.00 0.00 2.57
2480 2724 0.636647 TCTCCCAGCCAGATGACCTA 59.363 55.000 0.00 0.00 0.00 3.08
2481 2725 0.980231 GTCTCCCAGCCAGATGACCT 60.980 60.000 0.00 0.00 0.00 3.85
2482 2726 1.524482 GTCTCCCAGCCAGATGACC 59.476 63.158 0.00 0.00 0.00 4.02
2483 2727 0.980231 AGGTCTCCCAGCCAGATGAC 60.980 60.000 0.00 0.00 0.00 3.06
2484 2728 0.689080 GAGGTCTCCCAGCCAGATGA 60.689 60.000 0.00 0.00 0.00 2.92
2485 2729 0.690411 AGAGGTCTCCCAGCCAGATG 60.690 60.000 0.00 0.00 0.00 2.90
2486 2730 0.690411 CAGAGGTCTCCCAGCCAGAT 60.690 60.000 0.00 0.00 0.00 2.90
2487 2731 1.305633 CAGAGGTCTCCCAGCCAGA 60.306 63.158 0.00 0.00 0.00 3.86
2488 2732 2.365586 CCAGAGGTCTCCCAGCCAG 61.366 68.421 0.00 0.00 0.00 4.85
2489 2733 2.284921 CCAGAGGTCTCCCAGCCA 60.285 66.667 0.00 0.00 0.00 4.75
2490 2734 2.039624 TCCAGAGGTCTCCCAGCC 59.960 66.667 0.00 0.00 0.00 4.85
2491 2735 1.305718 ACTCCAGAGGTCTCCCAGC 60.306 63.158 0.00 0.00 0.00 4.85
2492 2736 0.334676 AGACTCCAGAGGTCTCCCAG 59.665 60.000 0.00 0.00 39.52 4.45
2493 2737 0.040351 CAGACTCCAGAGGTCTCCCA 59.960 60.000 0.00 0.00 41.45 4.37
2494 2738 0.333312 TCAGACTCCAGAGGTCTCCC 59.667 60.000 0.00 0.00 41.45 4.30
2495 2739 1.762708 CTCAGACTCCAGAGGTCTCC 58.237 60.000 0.00 0.00 41.45 3.71
2496 2740 1.102978 GCTCAGACTCCAGAGGTCTC 58.897 60.000 0.00 0.00 41.45 3.36
2497 2741 0.324275 GGCTCAGACTCCAGAGGTCT 60.324 60.000 0.00 0.00 43.81 3.85
2498 2742 0.613292 TGGCTCAGACTCCAGAGGTC 60.613 60.000 0.00 0.00 32.54 3.85
2499 2743 1.466979 TGGCTCAGACTCCAGAGGT 59.533 57.895 0.00 0.00 32.54 3.85
2500 2744 4.449638 TGGCTCAGACTCCAGAGG 57.550 61.111 0.00 0.00 32.54 3.69
2504 2748 0.616964 AGATGCTGGCTCAGACTCCA 60.617 55.000 6.40 0.00 32.44 3.86
2505 2749 0.179078 CAGATGCTGGCTCAGACTCC 60.179 60.000 6.40 0.00 32.44 3.85
2506 2750 0.179078 CCAGATGCTGGCTCAGACTC 60.179 60.000 0.00 2.53 45.13 3.36
2507 2751 1.906253 CCAGATGCTGGCTCAGACT 59.094 57.895 0.00 0.53 45.13 3.24
2508 2752 4.536316 CCAGATGCTGGCTCAGAC 57.464 61.111 0.00 0.00 45.13 3.51
2516 2760 2.414481 CGAACAGTTTCTCCAGATGCTG 59.586 50.000 0.00 6.44 34.54 4.41
2517 2761 2.613977 CCGAACAGTTTCTCCAGATGCT 60.614 50.000 0.00 0.00 0.00 3.79
2518 2762 1.734465 CCGAACAGTTTCTCCAGATGC 59.266 52.381 0.00 0.00 0.00 3.91
2519 2763 1.734465 GCCGAACAGTTTCTCCAGATG 59.266 52.381 0.00 0.00 0.00 2.90
2520 2764 1.339151 GGCCGAACAGTTTCTCCAGAT 60.339 52.381 0.00 0.00 0.00 2.90
2521 2765 0.034896 GGCCGAACAGTTTCTCCAGA 59.965 55.000 0.00 0.00 0.00 3.86
2522 2766 0.035458 AGGCCGAACAGTTTCTCCAG 59.965 55.000 0.00 0.00 0.00 3.86
2523 2767 0.034896 GAGGCCGAACAGTTTCTCCA 59.965 55.000 0.00 0.00 0.00 3.86
2524 2768 0.673956 GGAGGCCGAACAGTTTCTCC 60.674 60.000 0.00 8.97 34.78 3.71
2525 2769 0.321996 AGGAGGCCGAACAGTTTCTC 59.678 55.000 0.00 0.00 0.00 2.87
2526 2770 0.765510 AAGGAGGCCGAACAGTTTCT 59.234 50.000 0.00 0.00 0.00 2.52
2527 2771 1.157585 GAAGGAGGCCGAACAGTTTC 58.842 55.000 0.00 0.00 0.00 2.78
2528 2772 0.765510 AGAAGGAGGCCGAACAGTTT 59.234 50.000 0.00 0.00 0.00 2.66
2529 2773 0.035458 CAGAAGGAGGCCGAACAGTT 59.965 55.000 0.00 0.00 0.00 3.16
2530 2774 1.674057 CAGAAGGAGGCCGAACAGT 59.326 57.895 0.00 0.00 0.00 3.55
2531 2775 1.078848 CCAGAAGGAGGCCGAACAG 60.079 63.158 0.00 0.00 36.89 3.16
2532 2776 1.415672 AACCAGAAGGAGGCCGAACA 61.416 55.000 0.00 0.00 38.69 3.18
2533 2777 0.250770 AAACCAGAAGGAGGCCGAAC 60.251 55.000 0.00 0.00 38.69 3.95
2534 2778 0.250727 CAAACCAGAAGGAGGCCGAA 60.251 55.000 0.00 0.00 38.69 4.30
2535 2779 1.374947 CAAACCAGAAGGAGGCCGA 59.625 57.895 0.00 0.00 38.69 5.54
2536 2780 1.675641 CCAAACCAGAAGGAGGCCG 60.676 63.158 0.00 0.00 38.69 6.13
2537 2781 0.322906 CTCCAAACCAGAAGGAGGCC 60.323 60.000 0.00 0.00 44.10 5.19
2538 2782 3.256281 CTCCAAACCAGAAGGAGGC 57.744 57.895 0.00 0.00 44.10 4.70
2540 2784 1.339535 GCTCCTCCAAACCAGAAGGAG 60.340 57.143 11.97 11.97 46.71 3.69
2541 2785 0.693049 GCTCCTCCAAACCAGAAGGA 59.307 55.000 0.00 0.00 38.69 3.36
2542 2786 0.695347 AGCTCCTCCAAACCAGAAGG 59.305 55.000 0.00 0.00 42.21 3.46
2543 2787 2.555757 CAAAGCTCCTCCAAACCAGAAG 59.444 50.000 0.00 0.00 0.00 2.85
2544 2788 2.091885 ACAAAGCTCCTCCAAACCAGAA 60.092 45.455 0.00 0.00 0.00 3.02
2545 2789 1.494721 ACAAAGCTCCTCCAAACCAGA 59.505 47.619 0.00 0.00 0.00 3.86
2546 2790 1.986882 ACAAAGCTCCTCCAAACCAG 58.013 50.000 0.00 0.00 0.00 4.00
2547 2791 2.224769 CCTACAAAGCTCCTCCAAACCA 60.225 50.000 0.00 0.00 0.00 3.67
2548 2792 2.039879 TCCTACAAAGCTCCTCCAAACC 59.960 50.000 0.00 0.00 0.00 3.27
2549 2793 3.418684 TCCTACAAAGCTCCTCCAAAC 57.581 47.619 0.00 0.00 0.00 2.93
2550 2794 3.394606 AGTTCCTACAAAGCTCCTCCAAA 59.605 43.478 0.00 0.00 0.00 3.28
2551 2795 2.979678 AGTTCCTACAAAGCTCCTCCAA 59.020 45.455 0.00 0.00 0.00 3.53
2552 2796 2.567615 GAGTTCCTACAAAGCTCCTCCA 59.432 50.000 0.00 0.00 0.00 3.86
2553 2797 2.835156 AGAGTTCCTACAAAGCTCCTCC 59.165 50.000 0.00 0.00 0.00 4.30
2554 2798 5.862678 ATAGAGTTCCTACAAAGCTCCTC 57.137 43.478 0.00 0.00 0.00 3.71
2555 2799 5.836358 CCTATAGAGTTCCTACAAAGCTCCT 59.164 44.000 0.00 0.00 0.00 3.69
2556 2800 5.834204 TCCTATAGAGTTCCTACAAAGCTCC 59.166 44.000 0.00 0.00 0.00 4.70
2557 2801 6.963083 TCCTATAGAGTTCCTACAAAGCTC 57.037 41.667 0.00 0.00 0.00 4.09
2558 2802 7.735326 TTTCCTATAGAGTTCCTACAAAGCT 57.265 36.000 0.00 0.00 0.00 3.74
2559 2803 8.788325 TTTTTCCTATAGAGTTCCTACAAAGC 57.212 34.615 0.00 0.00 0.00 3.51
2577 2821 9.601810 AGGACTGTAAAGGATTTTATTTTTCCT 57.398 29.630 0.00 0.00 41.68 3.36
2581 2825 9.996554 CCAAAGGACTGTAAAGGATTTTATTTT 57.003 29.630 0.00 0.00 40.09 1.82
2582 2826 9.154632 ACCAAAGGACTGTAAAGGATTTTATTT 57.845 29.630 0.00 0.00 40.09 1.40
2583 2827 8.721133 ACCAAAGGACTGTAAAGGATTTTATT 57.279 30.769 0.00 0.00 40.09 1.40
2584 2828 8.721133 AACCAAAGGACTGTAAAGGATTTTAT 57.279 30.769 0.00 0.00 40.09 1.40
2585 2829 8.417884 CAAACCAAAGGACTGTAAAGGATTTTA 58.582 33.333 0.00 0.00 40.09 1.52
2586 2830 7.093068 ACAAACCAAAGGACTGTAAAGGATTTT 60.093 33.333 0.00 0.00 40.09 1.82
2587 2831 6.382859 ACAAACCAAAGGACTGTAAAGGATTT 59.617 34.615 0.00 0.00 43.42 2.17
2588 2832 5.897250 ACAAACCAAAGGACTGTAAAGGATT 59.103 36.000 0.00 0.00 0.00 3.01
2589 2833 5.454966 ACAAACCAAAGGACTGTAAAGGAT 58.545 37.500 0.00 0.00 0.00 3.24
2590 2834 4.862371 ACAAACCAAAGGACTGTAAAGGA 58.138 39.130 0.00 0.00 0.00 3.36
2591 2835 6.702716 TTACAAACCAAAGGACTGTAAAGG 57.297 37.500 10.24 0.00 33.76 3.11
2592 2836 8.989653 TTTTTACAAACCAAAGGACTGTAAAG 57.010 30.769 17.89 0.00 40.46 1.85
2595 2839 9.629878 TCTATTTTTACAAACCAAAGGACTGTA 57.370 29.630 0.00 0.00 0.00 2.74
2596 2840 8.528044 TCTATTTTTACAAACCAAAGGACTGT 57.472 30.769 0.00 0.00 0.00 3.55
2597 2841 9.981114 ATTCTATTTTTACAAACCAAAGGACTG 57.019 29.630 0.00 0.00 0.00 3.51
2599 2843 9.419297 GGATTCTATTTTTACAAACCAAAGGAC 57.581 33.333 0.00 0.00 0.00 3.85
2600 2844 9.374711 AGGATTCTATTTTTACAAACCAAAGGA 57.625 29.630 0.00 0.00 0.00 3.36
2601 2845 9.423061 CAGGATTCTATTTTTACAAACCAAAGG 57.577 33.333 0.00 0.00 0.00 3.11
2602 2846 9.981114 ACAGGATTCTATTTTTACAAACCAAAG 57.019 29.630 0.00 0.00 0.00 2.77
2604 2848 9.974980 GAACAGGATTCTATTTTTACAAACCAA 57.025 29.630 0.00 0.00 0.00 3.67
2605 2849 8.581578 GGAACAGGATTCTATTTTTACAAACCA 58.418 33.333 0.00 0.00 0.00 3.67
2606 2850 8.803235 AGGAACAGGATTCTATTTTTACAAACC 58.197 33.333 0.00 0.00 0.00 3.27
2610 2854 9.627123 CCATAGGAACAGGATTCTATTTTTACA 57.373 33.333 0.00 0.00 0.00 2.41
2611 2855 9.847224 TCCATAGGAACAGGATTCTATTTTTAC 57.153 33.333 0.00 0.00 0.00 2.01
2613 2857 8.986929 CTCCATAGGAACAGGATTCTATTTTT 57.013 34.615 0.00 0.00 0.00 1.94
2630 2874 9.898152 GAAGGATAGAAATAATTCCTCCATAGG 57.102 37.037 10.73 0.00 45.21 2.57
2672 2916 8.750298 CCATCGAGTCTAGGGTATTGTTTATAT 58.250 37.037 0.00 0.00 0.00 0.86
2673 2917 7.946219 TCCATCGAGTCTAGGGTATTGTTTATA 59.054 37.037 0.00 0.00 0.00 0.98
2674 2918 6.781014 TCCATCGAGTCTAGGGTATTGTTTAT 59.219 38.462 0.00 0.00 0.00 1.40
2675 2919 6.131264 TCCATCGAGTCTAGGGTATTGTTTA 58.869 40.000 0.00 0.00 0.00 2.01
2676 2920 4.960469 TCCATCGAGTCTAGGGTATTGTTT 59.040 41.667 0.00 0.00 0.00 2.83
2677 2921 4.543689 TCCATCGAGTCTAGGGTATTGTT 58.456 43.478 0.00 0.00 0.00 2.83
2678 2922 4.180377 TCCATCGAGTCTAGGGTATTGT 57.820 45.455 0.00 0.00 0.00 2.71
2679 2923 5.531122 TTTCCATCGAGTCTAGGGTATTG 57.469 43.478 0.00 0.00 0.00 1.90
2680 2924 6.555463 TTTTTCCATCGAGTCTAGGGTATT 57.445 37.500 0.00 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.