Multiple sequence alignment - TraesCS5B01G007300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G007300 chr5B 100.000 6835 0 0 1 6835 8380358 8373524 0.000000e+00 12622.0
1 TraesCS5B01G007300 chr5B 96.099 2307 67 12 2357 4650 652933286 652935582 0.000000e+00 3740.0
2 TraesCS5B01G007300 chr5B 94.861 1226 33 6 859 2064 652931980 652933195 0.000000e+00 1888.0
3 TraesCS5B01G007300 chr5B 89.420 879 71 12 1 866 652930993 652931862 0.000000e+00 1088.0
4 TraesCS5B01G007300 chr5B 76.264 712 120 31 1284 1962 653010525 653009830 3.950000e-87 333.0
5 TraesCS5B01G007300 chr5B 85.417 288 34 8 1424 1705 8524349 8524634 6.700000e-75 292.0
6 TraesCS5B01G007300 chr5B 80.000 405 71 6 5254 5651 653006077 653005676 2.410000e-74 291.0
7 TraesCS5B01G007300 chr5B 79.310 319 47 15 912 1225 653011134 653010830 8.990000e-49 206.0
8 TraesCS5B01G007300 chr5B 98.969 97 1 0 2226 2322 652933194 652933290 2.530000e-39 174.0
9 TraesCS5B01G007300 chr5B 86.726 113 15 0 2475 2587 655305510 655305622 7.200000e-25 126.0
10 TraesCS5B01G007300 chr5B 87.209 86 9 2 3366 3450 652934364 652934280 5.640000e-16 97.1
11 TraesCS5B01G007300 chr5B 96.970 33 0 1 3361 3392 279216983 279216951 3.000000e-03 54.7
12 TraesCS5B01G007300 chr5A 95.046 2079 91 5 4039 6117 6440504 6438438 0.000000e+00 3258.0
13 TraesCS5B01G007300 chr5A 94.998 2079 91 5 4039 6117 6446714 6444649 0.000000e+00 3251.0
14 TraesCS5B01G007300 chr5A 93.236 1774 83 14 2232 3980 6448489 6446728 0.000000e+00 2577.0
15 TraesCS5B01G007300 chr5A 90.650 1968 143 21 128 2064 6450449 6448492 0.000000e+00 2577.0
16 TraesCS5B01G007300 chr5A 84.996 1213 112 45 3449 4650 6434860 6433707 0.000000e+00 1168.0
17 TraesCS5B01G007300 chr5A 87.795 762 68 14 2586 3343 6442066 6441326 0.000000e+00 869.0
18 TraesCS5B01G007300 chr5A 87.664 762 69 14 2586 3343 6435868 6435128 0.000000e+00 863.0
19 TraesCS5B01G007300 chr5A 86.177 803 94 13 4649 5448 6433561 6432773 0.000000e+00 852.0
20 TraesCS5B01G007300 chr5A 90.724 539 42 6 3449 3980 6441055 6440518 0.000000e+00 712.0
21 TraesCS5B01G007300 chr5A 88.106 454 39 7 5258 5698 5654074 5654525 6.070000e-145 525.0
22 TraesCS5B01G007300 chr5A 87.002 477 40 12 3449 3919 6523626 6524086 1.020000e-142 518.0
23 TraesCS5B01G007300 chr5A 78.089 858 131 42 911 1724 6614866 6615710 2.220000e-134 490.0
24 TraesCS5B01G007300 chr5A 90.795 239 13 5 5665 5900 5654524 5654756 1.850000e-80 311.0
25 TraesCS5B01G007300 chr5A 78.557 485 88 11 5214 5691 6619598 6620073 8.610000e-79 305.0
26 TraesCS5B01G007300 chr5A 80.250 400 64 11 4250 4643 6484403 6484013 3.120000e-73 287.0
27 TraesCS5B01G007300 chr5A 83.904 292 37 8 4678 4961 6483694 6483405 3.140000e-68 270.0
28 TraesCS5B01G007300 chr5A 93.923 181 8 3 2048 2227 526657969 526657791 3.140000e-68 270.0
29 TraesCS5B01G007300 chr5A 89.630 135 8 2 2457 2587 6436104 6435972 4.240000e-37 167.0
30 TraesCS5B01G007300 chr5A 89.630 135 8 2 2457 2587 6442310 6442178 4.240000e-37 167.0
31 TraesCS5B01G007300 chr5A 92.188 64 5 0 6257 6320 6438546 6438483 2.630000e-14 91.6
32 TraesCS5B01G007300 chr5A 92.188 64 5 0 6257 6320 6444757 6444694 2.630000e-14 91.6
33 TraesCS5B01G007300 chr5A 100.000 31 0 0 6149 6179 6438427 6438397 2.660000e-04 58.4
34 TraesCS5B01G007300 chr5A 100.000 31 0 0 6149 6179 6444638 6444608 2.660000e-04 58.4
35 TraesCS5B01G007300 chr5D 92.179 2097 123 21 1 2064 8054532 8052444 0.000000e+00 2926.0
36 TraesCS5B01G007300 chr5D 94.309 1810 76 11 2224 4021 8052447 8050653 0.000000e+00 2747.0
37 TraesCS5B01G007300 chr5D 96.091 1535 57 2 4648 6179 8049332 8047798 0.000000e+00 2499.0
38 TraesCS5B01G007300 chr5D 92.647 612 21 5 4039 4650 8050664 8050077 0.000000e+00 859.0
39 TraesCS5B01G007300 chr5D 87.685 674 59 10 5253 5911 7631108 7630444 0.000000e+00 763.0
40 TraesCS5B01G007300 chr5D 77.074 1121 158 63 910 1962 8406660 8407749 7.750000e-154 555.0
41 TraesCS5B01G007300 chr5D 82.692 416 50 13 850 1257 8046272 8045871 3.920000e-92 350.0
42 TraesCS5B01G007300 chr5D 81.122 392 64 6 5254 5638 8411449 8411837 8.610000e-79 305.0
43 TraesCS5B01G007300 chr5D 82.965 317 45 6 4649 4958 8261460 8261774 1.880000e-70 278.0
44 TraesCS5B01G007300 chr5D 94.318 176 9 1 2052 2227 12037644 12037470 1.130000e-67 268.0
45 TraesCS5B01G007300 chr5D 92.481 133 10 0 1848 1980 8041050 8040918 2.520000e-44 191.0
46 TraesCS5B01G007300 chr5D 93.443 61 4 0 6257 6317 8047968 8047908 2.630000e-14 91.6
47 TraesCS5B01G007300 chr5D 84.932 73 9 2 3371 3442 1866938 1866867 9.510000e-09 73.1
48 TraesCS5B01G007300 chrUn 87.695 642 66 6 138 769 377815676 377815038 0.000000e+00 736.0
49 TraesCS5B01G007300 chrUn 87.580 628 65 6 128 745 365974657 365975281 0.000000e+00 715.0
50 TraesCS5B01G007300 chrUn 89.461 427 37 6 2687 3110 476745288 476745709 3.630000e-147 532.0
51 TraesCS5B01G007300 chrUn 95.223 314 15 0 5804 6117 476280828 476280515 1.320000e-136 497.0
52 TraesCS5B01G007300 chrUn 92.188 64 5 0 6257 6320 476280623 476280560 2.630000e-14 91.6
53 TraesCS5B01G007300 chrUn 100.000 31 0 0 6149 6179 476280504 476280474 2.660000e-04 58.4
54 TraesCS5B01G007300 chr1B 78.437 1011 163 28 3488 4489 34253838 34252874 5.860000e-170 608.0
55 TraesCS5B01G007300 chr1B 81.542 493 73 12 3461 3947 47634340 47633860 2.310000e-104 390.0
56 TraesCS5B01G007300 chr1B 80.889 225 41 2 1513 1736 47636430 47636207 7.050000e-40 176.0
57 TraesCS5B01G007300 chr1B 84.416 154 10 8 2301 2441 34254916 34254764 9.240000e-29 139.0
58 TraesCS5B01G007300 chr1D 83.612 659 91 11 4976 5620 7021698 7022353 2.730000e-168 603.0
59 TraesCS5B01G007300 chr1D 83.442 616 75 16 4040 4650 7019867 7020460 1.300000e-151 547.0
60 TraesCS5B01G007300 chr1D 83.617 470 67 6 4039 4503 20948317 20947853 3.790000e-117 433.0
61 TraesCS5B01G007300 chr1D 83.827 439 59 9 2593 3025 7018943 7019375 2.300000e-109 407.0
62 TraesCS5B01G007300 chr1D 82.143 476 62 16 1515 1980 20950615 20950153 2.990000e-103 387.0
63 TraesCS5B01G007300 chr1D 81.301 492 77 9 3461 3947 30084228 30083747 1.080000e-102 385.0
64 TraesCS5B01G007300 chr1D 79.242 501 93 10 3528 4021 20948802 20948306 8.490000e-89 339.0
65 TraesCS5B01G007300 chr1D 80.336 417 60 11 1569 1980 7017842 7018241 5.180000e-76 296.0
66 TraesCS5B01G007300 chr1D 80.800 250 26 14 2235 2470 7018455 7018696 7.050000e-40 176.0
67 TraesCS5B01G007300 chr4D 83.404 470 68 6 4039 4503 73350457 73349993 1.760000e-115 427.0
68 TraesCS5B01G007300 chr4D 82.438 484 62 16 1507 1980 73366635 73366165 1.070000e-107 401.0
69 TraesCS5B01G007300 chr4D 96.000 175 6 1 2053 2227 243613445 243613272 4.040000e-72 283.0
70 TraesCS5B01G007300 chr4D 82.727 110 9 4 3352 3457 148699069 148699172 9.440000e-14 89.8
71 TraesCS5B01G007300 chr1A 80.828 459 71 14 3493 3947 30142345 30141900 1.830000e-90 344.0
72 TraesCS5B01G007300 chr2B 97.006 167 5 0 2063 2229 72616753 72616587 1.450000e-71 281.0
73 TraesCS5B01G007300 chr2B 89.024 82 9 0 4720 4801 726691616 726691697 1.210000e-17 102.0
74 TraesCS5B01G007300 chr2B 92.000 50 4 0 2419 2468 357523857 357523808 3.420000e-08 71.3
75 TraesCS5B01G007300 chr2B 94.444 36 2 0 741 776 231634767 231634802 1.000000e-03 56.5
76 TraesCS5B01G007300 chr7D 96.450 169 6 0 2063 2231 312574292 312574124 5.220000e-71 279.0
77 TraesCS5B01G007300 chr7A 96.471 170 4 2 2063 2230 156115839 156116008 5.220000e-71 279.0
78 TraesCS5B01G007300 chr2A 95.402 174 8 0 2060 2233 469790203 469790030 1.880000e-70 278.0
79 TraesCS5B01G007300 chr2A 81.579 76 12 2 3376 3450 570010082 570010008 2.060000e-05 62.1
80 TraesCS5B01G007300 chr6D 95.858 169 7 0 2063 2231 431000016 431000184 2.430000e-69 274.0
81 TraesCS5B01G007300 chr6D 81.373 102 16 2 3357 3455 1814171 1814272 5.680000e-11 80.5
82 TraesCS5B01G007300 chr3D 93.333 180 12 0 2062 2241 329681923 329681744 4.060000e-67 267.0
83 TraesCS5B01G007300 chr2D 81.780 236 34 9 1498 1730 612720885 612721114 9.050000e-44 189.0
84 TraesCS5B01G007300 chr2D 90.741 54 5 0 1868 1921 632879720 632879773 9.510000e-09 73.1
85 TraesCS5B01G007300 chr2D 86.154 65 5 4 3387 3449 465963995 465963933 4.420000e-07 67.6
86 TraesCS5B01G007300 chr2D 88.889 54 6 0 1868 1921 632852336 632852389 4.420000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G007300 chr5B 8373524 8380358 6834 True 12622.000000 12622 100.000000 1 6835 1 chr5B.!!$R1 6834
1 TraesCS5B01G007300 chr5B 652930993 652935582 4589 False 1722.500000 3740 94.837250 1 4650 4 chr5B.!!$F3 4649
2 TraesCS5B01G007300 chr5B 653005676 653011134 5458 True 276.666667 333 78.524667 912 5651 3 chr5B.!!$R4 4739
3 TraesCS5B01G007300 chr5A 6432773 6450449 17676 True 1117.400000 3258 91.661467 128 6320 15 chr5A.!!$R2 6192
4 TraesCS5B01G007300 chr5A 5654074 5654756 682 False 418.000000 525 89.450500 5258 5900 2 chr5A.!!$F2 642
5 TraesCS5B01G007300 chr5A 6614866 6620073 5207 False 397.500000 490 78.323000 911 5691 2 chr5A.!!$F3 4780
6 TraesCS5B01G007300 chr5A 6483405 6484403 998 True 278.500000 287 82.077000 4250 4961 2 chr5A.!!$R3 711
7 TraesCS5B01G007300 chr5D 8045871 8054532 8661 True 1578.766667 2926 91.893500 1 6317 6 chr5D.!!$R5 6316
8 TraesCS5B01G007300 chr5D 7630444 7631108 664 True 763.000000 763 87.685000 5253 5911 1 chr5D.!!$R2 658
9 TraesCS5B01G007300 chr5D 8406660 8411837 5177 False 430.000000 555 79.098000 910 5638 2 chr5D.!!$F2 4728
10 TraesCS5B01G007300 chrUn 377815038 377815676 638 True 736.000000 736 87.695000 138 769 1 chrUn.!!$R1 631
11 TraesCS5B01G007300 chrUn 365974657 365975281 624 False 715.000000 715 87.580000 128 745 1 chrUn.!!$F1 617
12 TraesCS5B01G007300 chr1B 34252874 34254916 2042 True 373.500000 608 81.426500 2301 4489 2 chr1B.!!$R1 2188
13 TraesCS5B01G007300 chr1B 47633860 47636430 2570 True 283.000000 390 81.215500 1513 3947 2 chr1B.!!$R2 2434
14 TraesCS5B01G007300 chr1D 7017842 7022353 4511 False 405.800000 603 82.403400 1569 5620 5 chr1D.!!$F1 4051
15 TraesCS5B01G007300 chr1D 20947853 20950615 2762 True 386.333333 433 81.667333 1515 4503 3 chr1D.!!$R2 2988

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.238289 CAAACATGCTCGTCGGCTTT 59.762 50.0 0.00 0.00 0.00 3.51 F
1081 1245 0.246635 CACACCCTAACCTGTCCGAG 59.753 60.0 0.00 0.00 0.00 4.63 F
1352 1775 0.814010 GTTCTTGATATGGCCGCGGT 60.814 55.0 28.70 9.89 0.00 5.68 F
2451 3976 0.829333 AGCGCTTCCATGAGAGACAT 59.171 50.0 2.64 0.00 40.17 3.06 F
3089 5039 0.104671 ACAGCCACAATTGTGCCAAC 59.895 50.0 29.42 18.55 44.34 3.77 F
4132 12384 0.181587 TGTTTCGCCTTGTCCCTTCA 59.818 50.0 0.00 0.00 0.00 3.02 F
5263 21357 0.243365 ATGGCGCTGCAATTTTTCGA 59.757 45.0 7.64 0.00 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1609 2054 1.363246 TGCCCATGTAGGTGGTGTTA 58.637 50.000 0.00 0.00 37.57 2.41 R
2382 3898 0.913205 TCTCCGACCTAGAGCACTCT 59.087 55.000 5.36 5.36 43.40 3.24 R
2839 4745 4.163839 GGATATCCTCTAATGGCAGCATCT 59.836 45.833 14.97 0.00 0.00 2.90 R
3818 5838 1.409381 GCCCTTCTCTGCAGCCTTTAT 60.409 52.381 9.47 0.00 0.00 1.40 R
4584 19049 0.261991 ACGAGGCTGGAATAGGAGGA 59.738 55.000 2.65 0.00 0.00 3.71 R
5352 21447 0.031994 CACCAAAAGCCCTTTGTCCG 59.968 55.000 7.80 0.00 42.57 4.79 R
6382 22533 0.248289 GATTTGCAATGGTGGCAGCT 59.752 50.000 18.53 0.36 43.05 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.238289 CAAACATGCTCGTCGGCTTT 59.762 50.000 0.00 0.00 0.00 3.51
53 54 5.066634 ACTTCGAGATACAACGTCTCATGAT 59.933 40.000 0.00 0.00 41.70 2.45
78 79 2.035321 TGTACTTCATGTCACGTGCTCA 59.965 45.455 11.67 12.91 0.00 4.26
82 83 3.376859 ACTTCATGTCACGTGCTCAAAAA 59.623 39.130 11.67 9.84 0.00 1.94
108 109 5.184096 TCCAACAACTGTTTTTAGCAAGTGA 59.816 36.000 0.00 0.00 35.83 3.41
125 126 7.094631 AGCAAGTGATATCGTACAACAGTTTA 58.905 34.615 0.00 0.00 0.00 2.01
126 127 7.063074 AGCAAGTGATATCGTACAACAGTTTAC 59.937 37.037 0.00 0.00 0.00 2.01
200 201 3.337889 CATGCGCATACGGGTCGG 61.338 66.667 24.84 3.88 40.57 4.79
219 220 1.068417 CCTCAACCGACGACCACAA 59.932 57.895 0.00 0.00 0.00 3.33
225 226 1.250328 ACCGACGACCACAAGTGATA 58.750 50.000 0.94 0.00 0.00 2.15
229 230 2.550978 GACGACCACAAGTGATATGGG 58.449 52.381 0.94 0.00 37.86 4.00
324 325 5.045869 AGGGGTTTTCGACAATCTCAAGATA 60.046 40.000 0.00 0.00 33.73 1.98
333 334 7.658261 TCGACAATCTCAAGATATACCGATTT 58.342 34.615 0.00 0.00 33.73 2.17
388 389 6.142798 GTGTGCAAACATGTGTTCATAAAGAG 59.857 38.462 0.88 0.00 37.25 2.85
400 411 8.204160 TGTGTTCATAAAGAGGAGTGTATATGG 58.796 37.037 0.00 0.00 0.00 2.74
411 432 4.330250 GAGTGTATATGGCCATCTGCATT 58.670 43.478 24.80 18.90 43.89 3.56
442 463 9.033481 CATGTTTCTCAAAGCAAGTTCAAATTA 57.967 29.630 0.00 0.00 0.00 1.40
565 586 0.895530 GCGAGCTATACCTGGCCATA 59.104 55.000 5.51 0.00 31.34 2.74
579 600 1.750930 CCATATGTCGGGCTGAGCT 59.249 57.895 3.72 0.00 0.00 4.09
618 639 0.883833 CCAAAGCCTGACGCAGAAAT 59.116 50.000 8.20 0.00 41.38 2.17
666 687 2.289195 ACTGTCGGGCGTAAAAATCAGA 60.289 45.455 0.00 0.00 0.00 3.27
1081 1245 0.246635 CACACCCTAACCTGTCCGAG 59.753 60.000 0.00 0.00 0.00 4.63
1193 1360 2.114670 CATCGAAGCCGCCCACAAT 61.115 57.895 0.00 0.00 35.37 2.71
1342 1755 2.683968 GTGTGTGCTCCGTTCTTGATA 58.316 47.619 0.00 0.00 0.00 2.15
1352 1775 0.814010 GTTCTTGATATGGCCGCGGT 60.814 55.000 28.70 9.89 0.00 5.68
1676 2121 1.807573 GGCAGCTTCTCGGTCTTCG 60.808 63.158 0.00 0.00 40.90 3.79
2067 3571 7.619964 CTAGACTAAGCTAGCCTAATACTCC 57.380 44.000 12.13 0.00 32.26 3.85
2068 3572 5.326900 AGACTAAGCTAGCCTAATACTCCC 58.673 45.833 12.13 0.00 0.00 4.30
2070 3574 5.326900 ACTAAGCTAGCCTAATACTCCCTC 58.673 45.833 12.13 0.00 0.00 4.30
2071 3575 3.178412 AGCTAGCCTAATACTCCCTCC 57.822 52.381 12.13 0.00 0.00 4.30
2072 3576 1.819903 GCTAGCCTAATACTCCCTCCG 59.180 57.143 2.29 0.00 0.00 4.63
2075 3579 2.317973 AGCCTAATACTCCCTCCGTTC 58.682 52.381 0.00 0.00 0.00 3.95
2076 3580 1.343789 GCCTAATACTCCCTCCGTTCC 59.656 57.143 0.00 0.00 0.00 3.62
2077 3581 1.969208 CCTAATACTCCCTCCGTTCCC 59.031 57.143 0.00 0.00 0.00 3.97
2079 3583 1.961133 AATACTCCCTCCGTTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
2080 3584 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
2083 3587 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2086 3590 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
2087 3591 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
2088 3592 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
2089 3593 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
2090 3594 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
2091 3595 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
2092 3596 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
2093 3597 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
2094 3598 9.169592 CTCCGTTCCCAAATATAAGTCTTTTTA 57.830 33.333 0.00 0.00 0.00 1.52
2095 3599 9.169592 TCCGTTCCCAAATATAAGTCTTTTTAG 57.830 33.333 0.00 0.00 0.00 1.85
2096 3600 9.169592 CCGTTCCCAAATATAAGTCTTTTTAGA 57.830 33.333 0.00 0.00 0.00 2.10
2109 3613 8.753497 AAGTCTTTTTAGAGATTCCAACAAGT 57.247 30.769 0.00 0.00 0.00 3.16
2110 3614 8.159344 AGTCTTTTTAGAGATTCCAACAAGTG 57.841 34.615 0.00 0.00 0.00 3.16
2111 3615 7.993183 AGTCTTTTTAGAGATTCCAACAAGTGA 59.007 33.333 0.00 0.00 0.00 3.41
2112 3616 8.070769 GTCTTTTTAGAGATTCCAACAAGTGAC 58.929 37.037 0.00 0.00 0.00 3.67
2113 3617 7.993183 TCTTTTTAGAGATTCCAACAAGTGACT 59.007 33.333 0.00 0.00 0.00 3.41
2114 3618 9.273016 CTTTTTAGAGATTCCAACAAGTGACTA 57.727 33.333 0.00 0.00 0.00 2.59
2115 3619 8.603242 TTTTAGAGATTCCAACAAGTGACTAC 57.397 34.615 0.00 0.00 0.00 2.73
2116 3620 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
2117 3621 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
2118 3622 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
2119 3623 7.324178 AGAGATTCCAACAAGTGACTACATAC 58.676 38.462 0.00 0.00 0.00 2.39
2120 3624 6.100004 AGATTCCAACAAGTGACTACATACG 58.900 40.000 0.00 0.00 0.00 3.06
2121 3625 4.182693 TCCAACAAGTGACTACATACGG 57.817 45.455 0.00 0.00 0.00 4.02
2122 3626 3.827876 TCCAACAAGTGACTACATACGGA 59.172 43.478 0.00 0.00 0.00 4.69
2123 3627 4.082408 TCCAACAAGTGACTACATACGGAG 60.082 45.833 0.00 0.00 0.00 4.63
2124 3628 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
2125 3629 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2126 3630 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2127 3631 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
2128 3632 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2129 3633 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2130 3634 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2131 3635 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2132 3636 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
2133 3637 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
2134 3638 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
2135 3639 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
2136 3640 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
2137 3641 6.266168 ACATACGGAGCAAAATGAATGAAA 57.734 33.333 0.00 0.00 0.00 2.69
2138 3642 6.092748 ACATACGGAGCAAAATGAATGAAAC 58.907 36.000 0.00 0.00 0.00 2.78
2139 3643 4.853924 ACGGAGCAAAATGAATGAAACT 57.146 36.364 0.00 0.00 0.00 2.66
2140 3644 5.957842 ACGGAGCAAAATGAATGAAACTA 57.042 34.783 0.00 0.00 0.00 2.24
2141 3645 5.699839 ACGGAGCAAAATGAATGAAACTAC 58.300 37.500 0.00 0.00 0.00 2.73
2142 3646 5.240623 ACGGAGCAAAATGAATGAAACTACA 59.759 36.000 0.00 0.00 0.00 2.74
2143 3647 6.071952 ACGGAGCAAAATGAATGAAACTACAT 60.072 34.615 0.00 0.00 0.00 2.29
2144 3648 6.808212 CGGAGCAAAATGAATGAAACTACATT 59.192 34.615 0.00 0.00 42.19 2.71
2145 3649 7.008628 CGGAGCAAAATGAATGAAACTACATTC 59.991 37.037 12.55 12.55 43.24 2.67
2146 3650 8.031277 GGAGCAAAATGAATGAAACTACATTCT 58.969 33.333 17.90 5.68 43.24 2.40
2182 3686 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
2183 3687 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
2184 3688 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
2185 3689 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
2186 3690 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
2187 3691 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
2188 3692 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
2189 3693 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
2190 3694 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
2191 3695 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
2192 3696 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
2193 3697 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
2194 3698 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
2195 3699 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
2196 3700 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
2197 3701 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
2198 3702 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
2203 3707 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
2204 3708 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
2218 3722 9.211485 TCTAAAAAGACTTACATTTAGGAACGG 57.789 33.333 13.94 0.00 36.48 4.44
2219 3723 9.211485 CTAAAAAGACTTACATTTAGGAACGGA 57.789 33.333 8.91 0.00 33.69 4.69
2220 3724 7.668525 AAAAGACTTACATTTAGGAACGGAG 57.331 36.000 0.00 0.00 0.00 4.63
2221 3725 5.340439 AGACTTACATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
2222 3726 4.161754 AGACTTACATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
2396 3912 9.036671 GTATTGAAATAAAGAGTGCTCTAGGTC 57.963 37.037 1.77 0.00 39.39 3.85
2451 3976 0.829333 AGCGCTTCCATGAGAGACAT 59.171 50.000 2.64 0.00 40.17 3.06
2453 3978 2.131183 GCGCTTCCATGAGAGACATAC 58.869 52.381 0.00 0.00 37.46 2.39
2839 4745 1.830587 ATCTTGGGACAGCACTCGCA 61.831 55.000 0.00 0.00 42.39 5.10
2911 4817 6.197276 GCACAATGCAGATGTACTATTCAAG 58.803 40.000 7.53 0.00 44.26 3.02
3079 5029 1.013596 CGTTCAGTTCACAGCCACAA 58.986 50.000 0.00 0.00 0.00 3.33
3089 5039 0.104671 ACAGCCACAATTGTGCCAAC 59.895 50.000 29.42 18.55 44.34 3.77
3373 5370 6.749036 ATATTCTACTTCCTTCGTCCCATT 57.251 37.500 0.00 0.00 0.00 3.16
3621 5636 6.036470 GCATTACAAAAATCTTCTGTAGCCC 58.964 40.000 0.00 0.00 0.00 5.19
3655 5670 8.132362 GCTATTGATTCAGGTATAGTATCCTCG 58.868 40.741 5.98 0.00 30.91 4.63
3818 5838 6.553476 TGATAGTCCTCGGGATAATCTTTTGA 59.447 38.462 13.51 0.00 32.73 2.69
3896 5916 2.389998 CAAACCCAAATGTTCCGAACG 58.610 47.619 6.78 0.00 0.00 3.95
4027 12270 7.335422 CAGTACAACTAGATGATGCTCCTTTTT 59.665 37.037 7.05 0.00 0.00 1.94
4028 12271 6.749923 ACAACTAGATGATGCTCCTTTTTC 57.250 37.500 7.05 0.00 0.00 2.29
4029 12272 6.479884 ACAACTAGATGATGCTCCTTTTTCT 58.520 36.000 7.05 0.00 0.00 2.52
4030 12273 7.624549 ACAACTAGATGATGCTCCTTTTTCTA 58.375 34.615 7.05 0.00 0.00 2.10
4132 12384 0.181587 TGTTTCGCCTTGTCCCTTCA 59.818 50.000 0.00 0.00 0.00 3.02
4292 12557 7.524717 TGAGTATTGCCTTTCTAAAGCTTTT 57.475 32.000 18.47 1.58 34.69 2.27
4598 19063 6.261158 GTCAAAGTTTATCCTCCTATTCCAGC 59.739 42.308 0.00 0.00 0.00 4.85
4829 20864 7.828508 AAGCAGGATTATCTAAATGCATCAA 57.171 32.000 0.00 0.00 36.15 2.57
4962 21002 0.525761 TCTGGGCAATGCGTAAAAGC 59.474 50.000 0.00 0.00 37.71 3.51
5127 21221 2.905415 TGGTCTTCCATTCCATTGCT 57.095 45.000 0.00 0.00 39.03 3.91
5169 21263 4.637483 TGCTCTTTTCTCACAGTTTTGG 57.363 40.909 0.00 0.00 0.00 3.28
5174 21268 5.719173 TCTTTTCTCACAGTTTTGGGTTTG 58.281 37.500 0.00 0.00 0.00 2.93
5242 21336 3.679389 AGCAGTGTTTCTAGAATGTGGG 58.321 45.455 5.89 0.00 0.00 4.61
5262 21356 1.059549 GAATGGCGCTGCAATTTTTCG 59.940 47.619 7.64 0.00 31.63 3.46
5263 21357 0.243365 ATGGCGCTGCAATTTTTCGA 59.757 45.000 7.64 0.00 0.00 3.71
5307 21402 3.938963 TGAAGATGGATAACTTTGACGCC 59.061 43.478 0.00 0.00 0.00 5.68
5352 21447 2.359850 TGGCTTCGCATGGGTGAC 60.360 61.111 9.86 7.01 32.18 3.67
5810 21957 4.568956 TGTCGTGATCAACTGATTCATGT 58.431 39.130 0.00 0.00 34.37 3.21
5825 21972 0.319728 CATGTAGGGAGGCGATGGAG 59.680 60.000 0.00 0.00 0.00 3.86
5944 22095 8.601845 AAAACCCACTAAACTTTGAATTATGC 57.398 30.769 0.00 0.00 0.00 3.14
5945 22096 7.539034 AACCCACTAAACTTTGAATTATGCT 57.461 32.000 0.00 0.00 0.00 3.79
6014 22165 3.756434 GCTTGGAGCAAACCATGTTACTA 59.244 43.478 0.00 0.00 41.89 1.82
6169 22320 2.689471 TCCAATGCGCTTGCTGATAAAT 59.311 40.909 9.73 0.00 40.12 1.40
6179 22330 5.163972 CGCTTGCTGATAAATGAGATAGCTC 60.164 44.000 0.00 0.00 41.67 4.09
6181 22332 5.813513 TGCTGATAAATGAGATAGCTCCA 57.186 39.130 5.36 0.00 40.55 3.86
6183 22334 6.776744 TGCTGATAAATGAGATAGCTCCAAT 58.223 36.000 5.36 0.00 40.55 3.16
6184 22335 6.653740 TGCTGATAAATGAGATAGCTCCAATG 59.346 38.462 5.36 0.00 40.55 2.82
6185 22336 6.403418 GCTGATAAATGAGATAGCTCCAATGC 60.403 42.308 5.36 0.00 40.55 3.56
6186 22337 5.640783 TGATAAATGAGATAGCTCCAATGCG 59.359 40.000 5.36 0.00 40.55 4.73
6187 22338 1.805869 ATGAGATAGCTCCAATGCGC 58.194 50.000 5.36 0.00 40.55 6.09
6188 22339 0.755079 TGAGATAGCTCCAATGCGCT 59.245 50.000 9.73 1.31 40.55 5.92
6233 22384 1.770294 AAAAACCCGCCAGACTTTGA 58.230 45.000 0.00 0.00 0.00 2.69
6234 22385 1.770294 AAAACCCGCCAGACTTTGAA 58.230 45.000 0.00 0.00 0.00 2.69
6235 22386 1.995376 AAACCCGCCAGACTTTGAAT 58.005 45.000 0.00 0.00 0.00 2.57
6236 22387 1.534729 AACCCGCCAGACTTTGAATC 58.465 50.000 0.00 0.00 0.00 2.52
6237 22388 0.400213 ACCCGCCAGACTTTGAATCA 59.600 50.000 0.00 0.00 0.00 2.57
6238 22389 1.004745 ACCCGCCAGACTTTGAATCAT 59.995 47.619 0.00 0.00 0.00 2.45
6239 22390 1.402968 CCCGCCAGACTTTGAATCATG 59.597 52.381 0.00 0.00 0.00 3.07
6240 22391 1.402968 CCGCCAGACTTTGAATCATGG 59.597 52.381 0.00 0.00 0.00 3.66
6241 22392 2.573941 GCCAGACTTTGAATCATGGC 57.426 50.000 8.79 8.79 45.61 4.40
6242 22393 1.202222 GCCAGACTTTGAATCATGGCG 60.202 52.381 8.79 0.00 43.27 5.69
6243 22394 1.202222 CCAGACTTTGAATCATGGCGC 60.202 52.381 0.00 0.00 0.00 6.53
6244 22395 1.098050 AGACTTTGAATCATGGCGCC 58.902 50.000 22.73 22.73 0.00 6.53
6245 22396 1.098050 GACTTTGAATCATGGCGCCT 58.902 50.000 29.70 10.60 0.00 5.52
6246 22397 1.474077 GACTTTGAATCATGGCGCCTT 59.526 47.619 29.70 19.97 0.00 4.35
6247 22398 1.895131 ACTTTGAATCATGGCGCCTTT 59.105 42.857 29.70 15.67 0.00 3.11
6248 22399 2.094545 ACTTTGAATCATGGCGCCTTTC 60.095 45.455 29.70 22.86 0.00 2.62
6249 22400 1.838112 TTGAATCATGGCGCCTTTCT 58.162 45.000 29.70 8.25 0.00 2.52
6250 22401 1.838112 TGAATCATGGCGCCTTTCTT 58.162 45.000 29.70 16.17 0.00 2.52
6251 22402 2.170166 TGAATCATGGCGCCTTTCTTT 58.830 42.857 29.70 14.55 0.00 2.52
6252 22403 2.094597 TGAATCATGGCGCCTTTCTTTG 60.095 45.455 29.70 14.76 0.00 2.77
6253 22404 1.549203 ATCATGGCGCCTTTCTTTGT 58.451 45.000 29.70 2.36 0.00 2.83
6254 22405 2.192664 TCATGGCGCCTTTCTTTGTA 57.807 45.000 29.70 3.35 0.00 2.41
6255 22406 2.509569 TCATGGCGCCTTTCTTTGTAA 58.490 42.857 29.70 2.45 0.00 2.41
6256 22407 2.487762 TCATGGCGCCTTTCTTTGTAAG 59.512 45.455 29.70 6.08 0.00 2.34
6257 22408 1.975660 TGGCGCCTTTCTTTGTAAGT 58.024 45.000 29.70 0.00 0.00 2.24
6258 22409 2.303175 TGGCGCCTTTCTTTGTAAGTT 58.697 42.857 29.70 0.00 0.00 2.66
6259 22410 3.478509 TGGCGCCTTTCTTTGTAAGTTA 58.521 40.909 29.70 0.00 0.00 2.24
6260 22411 3.251487 TGGCGCCTTTCTTTGTAAGTTAC 59.749 43.478 29.70 6.06 0.00 2.50
6261 22412 3.501062 GGCGCCTTTCTTTGTAAGTTACT 59.499 43.478 22.15 0.00 0.00 2.24
6262 22413 4.464112 GCGCCTTTCTTTGTAAGTTACTG 58.536 43.478 14.00 5.07 0.00 2.74
6263 22414 4.612939 GCGCCTTTCTTTGTAAGTTACTGG 60.613 45.833 14.00 4.76 0.00 4.00
6264 22415 4.514066 CGCCTTTCTTTGTAAGTTACTGGT 59.486 41.667 14.00 0.00 0.00 4.00
6265 22416 5.008316 CGCCTTTCTTTGTAAGTTACTGGTT 59.992 40.000 14.00 0.00 0.00 3.67
6266 22417 6.203338 CGCCTTTCTTTGTAAGTTACTGGTTA 59.797 38.462 14.00 0.00 0.00 2.85
6267 22418 7.358066 GCCTTTCTTTGTAAGTTACTGGTTAC 58.642 38.462 14.00 0.00 0.00 2.50
6268 22419 7.228108 GCCTTTCTTTGTAAGTTACTGGTTACT 59.772 37.037 14.00 0.00 31.54 2.24
6269 22420 9.117183 CCTTTCTTTGTAAGTTACTGGTTACTT 57.883 33.333 14.00 9.50 36.55 2.24
6296 22447 8.888579 TTTTAAGTTGGTTTTGTGAAACTCAA 57.111 26.923 2.51 3.07 43.68 3.02
6297 22448 8.527567 TTTAAGTTGGTTTTGTGAAACTCAAG 57.472 30.769 2.51 0.00 43.68 3.02
6298 22449 5.722021 AGTTGGTTTTGTGAAACTCAAGT 57.278 34.783 2.51 5.37 43.68 3.16
6299 22450 5.709966 AGTTGGTTTTGTGAAACTCAAGTC 58.290 37.500 2.51 0.00 43.68 3.01
6300 22451 4.712122 TGGTTTTGTGAAACTCAAGTCC 57.288 40.909 2.51 0.00 43.68 3.85
6301 22452 4.340617 TGGTTTTGTGAAACTCAAGTCCT 58.659 39.130 2.51 0.00 43.68 3.85
6302 22453 4.157656 TGGTTTTGTGAAACTCAAGTCCTG 59.842 41.667 2.51 0.00 43.68 3.86
6303 22454 4.157840 GGTTTTGTGAAACTCAAGTCCTGT 59.842 41.667 2.51 0.00 43.68 4.00
6304 22455 5.336451 GGTTTTGTGAAACTCAAGTCCTGTT 60.336 40.000 2.51 0.00 43.68 3.16
6305 22456 5.975693 TTTGTGAAACTCAAGTCCTGTTT 57.024 34.783 0.00 0.00 38.04 2.83
6306 22457 5.975693 TTGTGAAACTCAAGTCCTGTTTT 57.024 34.783 0.00 0.00 38.04 2.43
6307 22458 5.975693 TGTGAAACTCAAGTCCTGTTTTT 57.024 34.783 0.00 0.00 38.04 1.94
6326 22477 4.365514 TTTTCTGTATGGAAGTCTGGCA 57.634 40.909 0.00 0.00 0.00 4.92
6327 22478 3.616956 TTCTGTATGGAAGTCTGGCAG 57.383 47.619 8.58 8.58 0.00 4.85
6328 22479 1.208052 TCTGTATGGAAGTCTGGCAGC 59.792 52.381 10.34 5.16 0.00 5.25
6329 22480 0.983467 TGTATGGAAGTCTGGCAGCA 59.017 50.000 10.34 1.42 0.00 4.41
6330 22481 1.065926 TGTATGGAAGTCTGGCAGCAG 60.066 52.381 10.34 0.00 0.00 4.24
6331 22482 1.208052 GTATGGAAGTCTGGCAGCAGA 59.792 52.381 10.34 0.00 0.00 4.26
6332 22483 0.917533 ATGGAAGTCTGGCAGCAGAT 59.082 50.000 10.34 0.00 33.34 2.90
6333 22484 0.251354 TGGAAGTCTGGCAGCAGATC 59.749 55.000 10.34 5.32 33.34 2.75
6334 22485 0.251354 GGAAGTCTGGCAGCAGATCA 59.749 55.000 10.34 0.00 33.34 2.92
6335 22486 1.134159 GGAAGTCTGGCAGCAGATCAT 60.134 52.381 10.34 0.00 33.34 2.45
6336 22487 1.941294 GAAGTCTGGCAGCAGATCATG 59.059 52.381 10.34 0.00 33.34 3.07
6337 22488 1.201424 AGTCTGGCAGCAGATCATGA 58.799 50.000 10.34 0.00 33.34 3.07
6338 22489 1.769465 AGTCTGGCAGCAGATCATGAT 59.231 47.619 8.25 8.25 33.34 2.45
6339 22490 2.970640 AGTCTGGCAGCAGATCATGATA 59.029 45.455 8.54 0.00 33.34 2.15
6340 22491 3.065655 GTCTGGCAGCAGATCATGATAC 58.934 50.000 8.54 1.36 33.34 2.24
6341 22492 2.970640 TCTGGCAGCAGATCATGATACT 59.029 45.455 8.54 3.87 0.00 2.12
6342 22493 4.021632 GTCTGGCAGCAGATCATGATACTA 60.022 45.833 8.54 0.00 33.34 1.82
6343 22494 4.776308 TCTGGCAGCAGATCATGATACTAT 59.224 41.667 8.54 0.00 0.00 2.12
6344 22495 4.828829 TGGCAGCAGATCATGATACTATG 58.171 43.478 8.54 7.09 0.00 2.23
6345 22496 3.622163 GGCAGCAGATCATGATACTATGC 59.378 47.826 19.55 19.55 0.00 3.14
6346 22497 4.251268 GCAGCAGATCATGATACTATGCA 58.749 43.478 24.73 0.00 34.71 3.96
6347 22498 4.876679 GCAGCAGATCATGATACTATGCAT 59.123 41.667 24.73 3.79 34.71 3.96
6348 22499 5.354513 GCAGCAGATCATGATACTATGCATT 59.645 40.000 24.73 11.32 34.71 3.56
6349 22500 6.675728 GCAGCAGATCATGATACTATGCATTG 60.676 42.308 24.73 19.04 34.71 2.82
6350 22501 6.371825 CAGCAGATCATGATACTATGCATTGT 59.628 38.462 24.73 17.70 34.71 2.71
6351 22502 6.594547 AGCAGATCATGATACTATGCATTGTC 59.405 38.462 24.73 5.15 34.71 3.18
6352 22503 6.370718 GCAGATCATGATACTATGCATTGTCA 59.629 38.462 17.13 10.63 32.58 3.58
6353 22504 7.094933 GCAGATCATGATACTATGCATTGTCAA 60.095 37.037 17.13 1.56 32.58 3.18
6354 22505 8.947115 CAGATCATGATACTATGCATTGTCAAT 58.053 33.333 17.13 6.65 0.00 2.57
6355 22506 9.516546 AGATCATGATACTATGCATTGTCAATT 57.483 29.630 17.13 1.84 0.00 2.32
6356 22507 9.770503 GATCATGATACTATGCATTGTCAATTC 57.229 33.333 17.13 10.65 0.00 2.17
6357 22508 8.102800 TCATGATACTATGCATTGTCAATTCC 57.897 34.615 17.13 3.10 0.00 3.01
6358 22509 6.882610 TGATACTATGCATTGTCAATTCCC 57.117 37.500 17.13 1.88 0.00 3.97
6359 22510 6.363882 TGATACTATGCATTGTCAATTCCCA 58.636 36.000 17.13 0.00 0.00 4.37
6360 22511 7.005902 TGATACTATGCATTGTCAATTCCCAT 58.994 34.615 17.13 3.06 0.00 4.00
6361 22512 8.162746 TGATACTATGCATTGTCAATTCCCATA 58.837 33.333 17.13 3.43 0.00 2.74
6362 22513 6.639632 ACTATGCATTGTCAATTCCCATAC 57.360 37.500 3.54 0.00 0.00 2.39
6363 22514 4.572985 ATGCATTGTCAATTCCCATACG 57.427 40.909 0.00 0.00 0.00 3.06
6364 22515 3.351740 TGCATTGTCAATTCCCATACGT 58.648 40.909 0.00 0.00 0.00 3.57
6365 22516 3.761218 TGCATTGTCAATTCCCATACGTT 59.239 39.130 0.00 0.00 0.00 3.99
6366 22517 4.219507 TGCATTGTCAATTCCCATACGTTT 59.780 37.500 0.00 0.00 0.00 3.60
6367 22518 4.562394 GCATTGTCAATTCCCATACGTTTG 59.438 41.667 0.00 0.00 0.00 2.93
6368 22519 3.840890 TGTCAATTCCCATACGTTTGC 57.159 42.857 0.00 0.00 0.00 3.68
6369 22520 3.417101 TGTCAATTCCCATACGTTTGCT 58.583 40.909 0.00 0.00 0.00 3.91
6370 22521 3.190327 TGTCAATTCCCATACGTTTGCTG 59.810 43.478 0.00 0.00 0.00 4.41
6371 22522 3.438781 GTCAATTCCCATACGTTTGCTGA 59.561 43.478 0.00 0.00 0.00 4.26
6372 22523 4.096382 GTCAATTCCCATACGTTTGCTGAT 59.904 41.667 0.00 0.00 0.00 2.90
6373 22524 5.295787 GTCAATTCCCATACGTTTGCTGATA 59.704 40.000 0.00 0.00 0.00 2.15
6374 22525 5.527214 TCAATTCCCATACGTTTGCTGATAG 59.473 40.000 0.00 0.00 0.00 2.08
6375 22526 4.746535 TTCCCATACGTTTGCTGATAGA 57.253 40.909 0.00 0.00 0.00 1.98
6376 22527 4.955811 TCCCATACGTTTGCTGATAGAT 57.044 40.909 0.00 0.00 0.00 1.98
6377 22528 4.631131 TCCCATACGTTTGCTGATAGATG 58.369 43.478 0.00 0.00 0.00 2.90
6378 22529 4.343814 TCCCATACGTTTGCTGATAGATGA 59.656 41.667 0.00 0.00 0.00 2.92
6379 22530 4.687948 CCCATACGTTTGCTGATAGATGAG 59.312 45.833 0.00 0.00 0.00 2.90
6380 22531 5.509670 CCCATACGTTTGCTGATAGATGAGA 60.510 44.000 0.00 0.00 0.00 3.27
6381 22532 6.162079 CCATACGTTTGCTGATAGATGAGAT 58.838 40.000 0.00 0.00 0.00 2.75
6382 22533 7.315890 CCATACGTTTGCTGATAGATGAGATA 58.684 38.462 0.00 0.00 0.00 1.98
6383 22534 7.487509 CCATACGTTTGCTGATAGATGAGATAG 59.512 40.741 0.00 0.00 0.00 2.08
6384 22535 5.226396 ACGTTTGCTGATAGATGAGATAGC 58.774 41.667 0.00 0.00 0.00 2.97
6385 22536 5.010516 ACGTTTGCTGATAGATGAGATAGCT 59.989 40.000 0.00 0.00 32.66 3.32
6386 22537 5.345472 CGTTTGCTGATAGATGAGATAGCTG 59.655 44.000 0.00 0.00 32.66 4.24
6387 22538 4.453177 TGCTGATAGATGAGATAGCTGC 57.547 45.455 0.00 0.00 35.04 5.25
6388 22539 3.195182 TGCTGATAGATGAGATAGCTGCC 59.805 47.826 0.00 0.00 33.98 4.85
6389 22540 3.195182 GCTGATAGATGAGATAGCTGCCA 59.805 47.826 0.00 0.00 30.20 4.92
6390 22541 4.746729 CTGATAGATGAGATAGCTGCCAC 58.253 47.826 0.00 0.00 0.00 5.01
6391 22542 3.513119 TGATAGATGAGATAGCTGCCACC 59.487 47.826 0.00 0.00 0.00 4.61
6392 22543 1.798626 AGATGAGATAGCTGCCACCA 58.201 50.000 0.00 0.00 0.00 4.17
6403 22554 1.338389 GCTGCCACCATTGCAAATCTT 60.338 47.619 1.71 0.00 38.46 2.40
6421 22572 8.084684 GCAAATCTTTGACCAGATTTCTACTTT 58.915 33.333 6.84 0.00 46.29 2.66
6425 22576 9.660180 ATCTTTGACCAGATTTCTACTTTACTC 57.340 33.333 0.00 0.00 28.19 2.59
6428 22579 7.776618 TGACCAGATTTCTACTTTACTCTGA 57.223 36.000 0.00 0.00 33.59 3.27
6430 22581 8.647796 TGACCAGATTTCTACTTTACTCTGAAA 58.352 33.333 0.00 0.00 33.59 2.69
6432 22583 9.274206 ACCAGATTTCTACTTTACTCTGAAAAC 57.726 33.333 0.00 0.00 33.59 2.43
6438 22589 7.435068 TCTACTTTACTCTGAAAACCATTGC 57.565 36.000 0.00 0.00 0.00 3.56
6439 22590 6.995686 TCTACTTTACTCTGAAAACCATTGCA 59.004 34.615 0.00 0.00 0.00 4.08
6440 22591 5.831997 ACTTTACTCTGAAAACCATTGCAC 58.168 37.500 0.00 0.00 0.00 4.57
6441 22592 5.594317 ACTTTACTCTGAAAACCATTGCACT 59.406 36.000 0.00 0.00 0.00 4.40
6442 22593 3.996150 ACTCTGAAAACCATTGCACTG 57.004 42.857 0.00 0.00 0.00 3.66
6443 22594 3.290710 ACTCTGAAAACCATTGCACTGT 58.709 40.909 3.14 0.00 0.00 3.55
6444 22595 3.316308 ACTCTGAAAACCATTGCACTGTC 59.684 43.478 3.14 0.00 0.00 3.51
6446 22597 4.713553 TCTGAAAACCATTGCACTGTCTA 58.286 39.130 3.14 0.00 0.00 2.59
6447 22598 5.316167 TCTGAAAACCATTGCACTGTCTAT 58.684 37.500 3.14 0.00 0.00 1.98
6448 22599 5.181811 TCTGAAAACCATTGCACTGTCTATG 59.818 40.000 3.14 0.00 0.00 2.23
6449 22600 3.855689 AAACCATTGCACTGTCTATGC 57.144 42.857 3.14 0.00 43.68 3.14
6450 22601 1.755179 ACCATTGCACTGTCTATGCC 58.245 50.000 3.14 0.00 42.69 4.40
6451 22602 1.027357 CCATTGCACTGTCTATGCCC 58.973 55.000 3.14 0.00 42.69 5.36
6453 22604 2.372264 CATTGCACTGTCTATGCCCTT 58.628 47.619 0.00 0.00 42.69 3.95
6455 22606 2.584835 TGCACTGTCTATGCCCTTTT 57.415 45.000 0.00 0.00 42.69 2.27
6456 22607 2.436417 TGCACTGTCTATGCCCTTTTC 58.564 47.619 0.00 0.00 42.69 2.29
6457 22608 2.040278 TGCACTGTCTATGCCCTTTTCT 59.960 45.455 0.00 0.00 42.69 2.52
6458 22609 3.084786 GCACTGTCTATGCCCTTTTCTT 58.915 45.455 0.00 0.00 37.08 2.52
6459 22610 3.127721 GCACTGTCTATGCCCTTTTCTTC 59.872 47.826 0.00 0.00 37.08 2.87
6460 22611 4.583871 CACTGTCTATGCCCTTTTCTTCT 58.416 43.478 0.00 0.00 0.00 2.85
6461 22612 5.006386 CACTGTCTATGCCCTTTTCTTCTT 58.994 41.667 0.00 0.00 0.00 2.52
6462 22613 5.123027 CACTGTCTATGCCCTTTTCTTCTTC 59.877 44.000 0.00 0.00 0.00 2.87
6488 22639 1.817099 GCGAGGGCTCTGTTCATGG 60.817 63.158 0.00 0.00 35.83 3.66
6497 22696 3.503748 GGCTCTGTTCATGGGTAATATGC 59.496 47.826 0.00 0.00 0.00 3.14
6504 22703 7.661437 TCTGTTCATGGGTAATATGCTCATTAC 59.339 37.037 10.71 10.71 39.60 1.89
6506 22705 7.445096 TGTTCATGGGTAATATGCTCATTACAG 59.555 37.037 17.29 8.36 41.29 2.74
6511 22746 6.934645 TGGGTAATATGCTCATTACAGTTAGC 59.065 38.462 17.29 0.00 41.29 3.09
6533 22768 2.079925 GTGGAGCACCTCTGAAATCAC 58.920 52.381 0.71 0.00 37.04 3.06
6542 22777 5.163814 GCACCTCTGAAATCACAGTTGTATC 60.164 44.000 0.00 0.00 38.79 2.24
6543 22778 6.169094 CACCTCTGAAATCACAGTTGTATCT 58.831 40.000 0.00 0.00 38.79 1.98
6546 22781 6.351711 CCTCTGAAATCACAGTTGTATCTCCT 60.352 42.308 0.00 0.00 38.79 3.69
6547 22782 6.634805 TCTGAAATCACAGTTGTATCTCCTC 58.365 40.000 0.00 0.00 38.79 3.71
6549 22784 6.950842 TGAAATCACAGTTGTATCTCCTCAT 58.049 36.000 0.00 0.00 0.00 2.90
6555 22790 6.663523 TCACAGTTGTATCTCCTCATGTAGAA 59.336 38.462 0.00 0.00 0.00 2.10
6565 22800 3.261643 TCCTCATGTAGAATGTGTGTGCT 59.738 43.478 0.00 0.00 0.00 4.40
6568 22803 4.002982 TCATGTAGAATGTGTGTGCTTCC 58.997 43.478 0.00 0.00 0.00 3.46
6573 22808 2.369860 AGAATGTGTGTGCTTCCTCTCA 59.630 45.455 0.00 0.00 0.00 3.27
6577 22812 2.139118 GTGTGTGCTTCCTCTCAAGTC 58.861 52.381 0.00 0.00 0.00 3.01
6578 22813 1.070758 TGTGTGCTTCCTCTCAAGTCC 59.929 52.381 0.00 0.00 0.00 3.85
6587 22822 5.611374 CTTCCTCTCAAGTCCAAGTGTTAA 58.389 41.667 0.00 0.00 0.00 2.01
6598 22833 8.946085 CAAGTCCAAGTGTTAAATCTAGCATTA 58.054 33.333 0.00 0.00 0.00 1.90
6621 22862 8.863872 TTATATATGCTTTCTTTTAGCCTCCC 57.136 34.615 0.00 0.00 37.85 4.30
6623 22864 2.795329 TGCTTTCTTTTAGCCTCCCAG 58.205 47.619 0.00 0.00 37.85 4.45
6625 22866 2.489722 GCTTTCTTTTAGCCTCCCAGTG 59.510 50.000 0.00 0.00 32.45 3.66
6626 22867 2.200373 TTCTTTTAGCCTCCCAGTGC 57.800 50.000 0.00 0.00 0.00 4.40
6627 22868 1.362224 TCTTTTAGCCTCCCAGTGCT 58.638 50.000 0.00 0.00 41.57 4.40
6628 22869 1.705186 TCTTTTAGCCTCCCAGTGCTT 59.295 47.619 0.00 0.00 39.00 3.91
6629 22870 1.815003 CTTTTAGCCTCCCAGTGCTTG 59.185 52.381 0.00 0.00 39.00 4.01
6630 22871 1.064003 TTTAGCCTCCCAGTGCTTGA 58.936 50.000 0.00 0.00 39.00 3.02
6631 22872 1.289160 TTAGCCTCCCAGTGCTTGAT 58.711 50.000 0.00 0.00 39.00 2.57
6633 22874 0.407139 AGCCTCCCAGTGCTTGATTT 59.593 50.000 0.00 0.00 32.94 2.17
6634 22875 1.203100 AGCCTCCCAGTGCTTGATTTT 60.203 47.619 0.00 0.00 32.94 1.82
6636 22877 1.067354 CCTCCCAGTGCTTGATTTTGC 60.067 52.381 0.00 0.00 0.00 3.68
6637 22878 1.614903 CTCCCAGTGCTTGATTTTGCA 59.385 47.619 0.00 0.00 36.79 4.08
6638 22879 2.232941 CTCCCAGTGCTTGATTTTGCAT 59.767 45.455 0.00 0.00 41.45 3.96
6639 22880 2.231964 TCCCAGTGCTTGATTTTGCATC 59.768 45.455 0.00 0.00 41.45 3.91
6640 22881 2.028839 CCCAGTGCTTGATTTTGCATCA 60.029 45.455 0.00 0.00 41.45 3.07
6641 22882 3.369052 CCCAGTGCTTGATTTTGCATCAT 60.369 43.478 0.00 0.00 41.45 2.45
6642 22883 3.616821 CCAGTGCTTGATTTTGCATCATG 59.383 43.478 0.00 0.00 41.45 3.07
6643 22884 3.616821 CAGTGCTTGATTTTGCATCATGG 59.383 43.478 0.00 0.00 41.45 3.66
6644 22885 3.512329 AGTGCTTGATTTTGCATCATGGA 59.488 39.130 0.00 0.00 41.45 3.41
6645 22886 4.161565 AGTGCTTGATTTTGCATCATGGAT 59.838 37.500 0.00 0.00 41.45 3.41
6646 22887 5.361571 AGTGCTTGATTTTGCATCATGGATA 59.638 36.000 0.00 0.00 41.45 2.59
6647 22888 5.690409 GTGCTTGATTTTGCATCATGGATAG 59.310 40.000 0.00 0.00 41.45 2.08
6648 22889 5.361571 TGCTTGATTTTGCATCATGGATAGT 59.638 36.000 0.00 0.00 33.94 2.12
6649 22890 6.127281 TGCTTGATTTTGCATCATGGATAGTT 60.127 34.615 0.00 0.00 33.94 2.24
6650 22891 6.759827 GCTTGATTTTGCATCATGGATAGTTT 59.240 34.615 0.00 0.00 0.00 2.66
6651 22892 7.042925 GCTTGATTTTGCATCATGGATAGTTTC 60.043 37.037 0.00 0.00 0.00 2.78
6652 22893 7.407393 TGATTTTGCATCATGGATAGTTTCA 57.593 32.000 0.00 0.00 0.00 2.69
6653 22894 8.014070 TGATTTTGCATCATGGATAGTTTCAT 57.986 30.769 0.00 0.00 0.00 2.57
6654 22895 8.139350 TGATTTTGCATCATGGATAGTTTCATC 58.861 33.333 0.00 0.00 0.00 2.92
6655 22896 6.395426 TTTGCATCATGGATAGTTTCATCC 57.605 37.500 0.00 0.00 44.21 3.51
6656 22897 5.314718 TGCATCATGGATAGTTTCATCCT 57.685 39.130 3.94 0.00 44.26 3.24
6657 22898 5.311265 TGCATCATGGATAGTTTCATCCTC 58.689 41.667 3.94 0.00 44.26 3.71
6658 22899 5.072736 TGCATCATGGATAGTTTCATCCTCT 59.927 40.000 3.94 0.00 44.26 3.69
6659 22900 6.270695 TGCATCATGGATAGTTTCATCCTCTA 59.729 38.462 3.94 0.00 44.26 2.43
6660 22901 6.817641 GCATCATGGATAGTTTCATCCTCTAG 59.182 42.308 3.94 0.00 44.26 2.43
6661 22902 6.924913 TCATGGATAGTTTCATCCTCTAGG 57.075 41.667 3.94 0.00 44.26 3.02
6676 22917 5.322754 TCCTCTAGGATAATCTTGGTACCG 58.677 45.833 7.57 0.00 39.78 4.02
6677 22918 4.082136 CCTCTAGGATAATCTTGGTACCGC 60.082 50.000 7.57 0.00 37.39 5.68
6678 22919 3.830755 TCTAGGATAATCTTGGTACCGCC 59.169 47.826 7.57 0.00 37.90 6.13
6694 22935 5.861787 GGTACCGCCATGAAAATTATATTGC 59.138 40.000 0.00 0.00 37.17 3.56
6704 22945 9.910511 CATGAAAATTATATTGCTTTGCTTCAC 57.089 29.630 0.00 0.00 0.00 3.18
6705 22946 8.477984 TGAAAATTATATTGCTTTGCTTCACC 57.522 30.769 0.00 0.00 0.00 4.02
6706 22947 7.548780 TGAAAATTATATTGCTTTGCTTCACCC 59.451 33.333 0.00 0.00 0.00 4.61
6707 22948 6.543430 AATTATATTGCTTTGCTTCACCCA 57.457 33.333 0.00 0.00 0.00 4.51
6709 22950 7.838079 ATTATATTGCTTTGCTTCACCCATA 57.162 32.000 0.00 0.00 0.00 2.74
6710 22951 3.874392 ATTGCTTTGCTTCACCCATAC 57.126 42.857 0.00 0.00 0.00 2.39
6711 22952 2.284754 TGCTTTGCTTCACCCATACA 57.715 45.000 0.00 0.00 0.00 2.29
6712 22953 1.885887 TGCTTTGCTTCACCCATACAC 59.114 47.619 0.00 0.00 0.00 2.90
6714 22955 2.493278 GCTTTGCTTCACCCATACACAT 59.507 45.455 0.00 0.00 0.00 3.21
6715 22956 3.674138 GCTTTGCTTCACCCATACACATG 60.674 47.826 0.00 0.00 0.00 3.21
6733 22999 6.624423 ACACATGGTTCTTTTATGCTGATTC 58.376 36.000 0.00 0.00 0.00 2.52
6740 23006 5.221891 TCTTTTATGCTGATTCGCTTCAC 57.778 39.130 0.00 0.00 0.00 3.18
6741 23007 4.094887 TCTTTTATGCTGATTCGCTTCACC 59.905 41.667 0.00 0.00 0.00 4.02
6770 23037 5.103855 TGAGGTTTTCTAGGGGTTTCTTTGA 60.104 40.000 0.00 0.00 0.00 2.69
6775 23042 7.990886 GGTTTTCTAGGGGTTTCTTTGATTTTT 59.009 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.179152 TGTATCTCGAAGTTCGGGCA 58.821 50.000 24.18 12.16 40.86 5.36
53 54 5.234752 AGCACGTGACATGAAGTACATAAA 58.765 37.500 22.23 0.00 37.46 1.40
82 83 6.534793 CACTTGCTAAAAACAGTTGTTGGATT 59.465 34.615 3.75 0.00 38.44 3.01
108 109 9.764363 ATCATGATGTAAACTGTTGTACGATAT 57.236 29.630 7.59 0.00 0.00 1.63
125 126 3.733337 GCCTCTAAACGGATCATGATGT 58.267 45.455 14.30 2.53 0.00 3.06
126 127 2.733552 CGCCTCTAAACGGATCATGATG 59.266 50.000 14.30 1.80 0.00 3.07
158 159 1.368019 CGCGATTGCACGGCATAAG 60.368 57.895 0.00 0.00 42.97 1.73
200 201 2.737376 GTGGTCGTCGGTTGAGGC 60.737 66.667 0.00 0.00 0.00 4.70
219 220 1.485124 TGAGTCACGCCCATATCACT 58.515 50.000 0.00 0.00 0.00 3.41
225 226 2.643551 CCTTTAATGAGTCACGCCCAT 58.356 47.619 0.00 0.00 0.00 4.00
229 230 0.373716 CGGCCTTTAATGAGTCACGC 59.626 55.000 0.00 0.00 0.00 5.34
271 272 4.490743 TCTCGCTATCGACAAAAACATCA 58.509 39.130 0.00 0.00 40.21 3.07
280 281 0.593618 GAGGCATCTCGCTATCGACA 59.406 55.000 0.00 0.00 40.21 4.35
299 300 2.778299 TGAGATTGTCGAAAACCCCTG 58.222 47.619 0.00 0.00 0.00 4.45
303 304 7.306632 CGGTATATCTTGAGATTGTCGAAAACC 60.307 40.741 0.00 0.00 36.05 3.27
324 325 5.533154 CACCTCTGAGAGACTAAATCGGTAT 59.467 44.000 11.82 0.00 0.00 2.73
333 334 2.040412 TGTGAGCACCTCTGAGAGACTA 59.960 50.000 11.82 0.00 0.00 2.59
388 389 2.038952 TGCAGATGGCCATATACACTCC 59.961 50.000 20.84 1.19 43.89 3.85
411 432 7.601886 TGAACTTGCTTTGAGAAACATGAAAAA 59.398 29.630 0.00 0.00 0.00 1.94
493 514 1.723542 GTGACACTGATGACAGAAGCG 59.276 52.381 0.00 0.00 46.03 4.68
565 586 3.790437 CCCAGCTCAGCCCGACAT 61.790 66.667 0.00 0.00 0.00 3.06
666 687 3.728373 GATGGGTCGGGCTTGGGT 61.728 66.667 0.00 0.00 0.00 4.51
693 714 3.415087 GCCTGAGGCCTCATGGGT 61.415 66.667 33.90 5.81 44.06 4.51
770 792 4.722279 GCCTGGGTCTATATATTTAGGCCT 59.278 45.833 19.40 11.78 42.53 5.19
804 826 4.011517 GGACGGCCCGACCTTTCA 62.012 66.667 17.52 0.00 38.50 2.69
996 1160 0.030501 TATGTCGGGTCCCCATCCTT 60.031 55.000 1.00 0.00 35.37 3.36
1193 1360 3.982372 GATCTTGCCGACGTCGCCA 62.982 63.158 31.73 25.52 38.18 5.69
1609 2054 1.363246 TGCCCATGTAGGTGGTGTTA 58.637 50.000 0.00 0.00 37.57 2.41
1676 2121 2.223745 GACCTCCTCCACGAGATACTC 58.776 57.143 0.00 0.00 30.97 2.59
2062 3566 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2063 3567 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2064 3568 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
2066 3570 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
2067 3571 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
2068 3572 7.625828 AAAAGACTTATATTTGGGAACGGAG 57.374 36.000 0.00 0.00 0.00 4.63
2070 3574 9.169592 TCTAAAAAGACTTATATTTGGGAACGG 57.830 33.333 0.00 0.00 0.00 4.44
2083 3587 9.847224 ACTTGTTGGAATCTCTAAAAAGACTTA 57.153 29.630 9.03 0.00 35.06 2.24
2086 3590 8.070769 GTCACTTGTTGGAATCTCTAAAAAGAC 58.929 37.037 9.03 0.00 35.06 3.01
2087 3591 7.993183 AGTCACTTGTTGGAATCTCTAAAAAGA 59.007 33.333 9.03 0.00 35.06 2.52
2088 3592 8.159344 AGTCACTTGTTGGAATCTCTAAAAAG 57.841 34.615 2.17 2.17 37.94 2.27
2089 3593 9.052759 GTAGTCACTTGTTGGAATCTCTAAAAA 57.947 33.333 0.00 0.00 0.00 1.94
2090 3594 8.208224 TGTAGTCACTTGTTGGAATCTCTAAAA 58.792 33.333 0.00 0.00 0.00 1.52
2091 3595 7.732025 TGTAGTCACTTGTTGGAATCTCTAAA 58.268 34.615 0.00 0.00 0.00 1.85
2092 3596 7.297936 TGTAGTCACTTGTTGGAATCTCTAA 57.702 36.000 0.00 0.00 0.00 2.10
2093 3597 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
2094 3598 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
2095 3599 6.253727 CGTATGTAGTCACTTGTTGGAATCTC 59.746 42.308 0.00 0.00 0.00 2.75
2096 3600 6.100004 CGTATGTAGTCACTTGTTGGAATCT 58.900 40.000 0.00 0.00 0.00 2.40
2097 3601 5.291128 CCGTATGTAGTCACTTGTTGGAATC 59.709 44.000 0.00 0.00 0.00 2.52
2098 3602 5.046878 TCCGTATGTAGTCACTTGTTGGAAT 60.047 40.000 0.00 0.00 0.00 3.01
2099 3603 4.281435 TCCGTATGTAGTCACTTGTTGGAA 59.719 41.667 0.00 0.00 0.00 3.53
2100 3604 3.827876 TCCGTATGTAGTCACTTGTTGGA 59.172 43.478 0.00 0.00 0.00 3.53
2101 3605 4.174009 CTCCGTATGTAGTCACTTGTTGG 58.826 47.826 0.00 0.00 0.00 3.77
2102 3606 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2103 3607 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2104 3608 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2105 3609 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
2106 3610 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2107 3611 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2108 3612 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2109 3613 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2110 3614 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
2111 3615 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
2112 3616 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
2113 3617 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
2114 3618 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
2115 3619 6.324819 AGTTTCATTCATTTTGCTCCGTATG 58.675 36.000 0.00 0.00 0.00 2.39
2116 3620 6.515272 AGTTTCATTCATTTTGCTCCGTAT 57.485 33.333 0.00 0.00 0.00 3.06
2117 3621 5.957842 AGTTTCATTCATTTTGCTCCGTA 57.042 34.783 0.00 0.00 0.00 4.02
2118 3622 4.853924 AGTTTCATTCATTTTGCTCCGT 57.146 36.364 0.00 0.00 0.00 4.69
2119 3623 5.698832 TGTAGTTTCATTCATTTTGCTCCG 58.301 37.500 0.00 0.00 0.00 4.63
2160 3664 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
2161 3665 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
2163 3667 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
2164 3668 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
2165 3669 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
2166 3670 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
2167 3671 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
2168 3672 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
2169 3673 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
2170 3674 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
2171 3675 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
2172 3676 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
2177 3681 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
2178 3682 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
2192 3696 9.211485 CCGTTCCTAAATGTAAGTCTTTTTAGA 57.789 33.333 13.43 2.40 0.00 2.10
2193 3697 9.211485 TCCGTTCCTAAATGTAAGTCTTTTTAG 57.789 33.333 7.75 7.75 0.00 1.85
2194 3698 9.211485 CTCCGTTCCTAAATGTAAGTCTTTTTA 57.789 33.333 0.00 0.00 0.00 1.52
2195 3699 7.174426 CCTCCGTTCCTAAATGTAAGTCTTTTT 59.826 37.037 0.00 0.00 0.00 1.94
2196 3700 6.653740 CCTCCGTTCCTAAATGTAAGTCTTTT 59.346 38.462 0.00 0.00 0.00 2.27
2197 3701 6.171213 CCTCCGTTCCTAAATGTAAGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
2198 3702 5.338137 CCCTCCGTTCCTAAATGTAAGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
2199 3703 4.161754 CCCTCCGTTCCTAAATGTAAGTCT 59.838 45.833 0.00 0.00 0.00 3.24
2200 3704 4.161001 TCCCTCCGTTCCTAAATGTAAGTC 59.839 45.833 0.00 0.00 0.00 3.01
2201 3705 4.098894 TCCCTCCGTTCCTAAATGTAAGT 58.901 43.478 0.00 0.00 0.00 2.24
2202 3706 4.161754 ACTCCCTCCGTTCCTAAATGTAAG 59.838 45.833 0.00 0.00 0.00 2.34
2203 3707 4.098894 ACTCCCTCCGTTCCTAAATGTAA 58.901 43.478 0.00 0.00 0.00 2.41
2204 3708 3.716431 ACTCCCTCCGTTCCTAAATGTA 58.284 45.455 0.00 0.00 0.00 2.29
2205 3709 2.547990 ACTCCCTCCGTTCCTAAATGT 58.452 47.619 0.00 0.00 0.00 2.71
2206 3710 3.958798 TCTACTCCCTCCGTTCCTAAATG 59.041 47.826 0.00 0.00 0.00 2.32
2207 3711 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
2208 3712 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
2209 3713 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
2210 3714 3.967467 ATTCTACTCCCTCCGTTCCTA 57.033 47.619 0.00 0.00 0.00 2.94
2211 3715 2.850695 ATTCTACTCCCTCCGTTCCT 57.149 50.000 0.00 0.00 0.00 3.36
2212 3716 3.908643 AAATTCTACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
2382 3898 0.913205 TCTCCGACCTAGAGCACTCT 59.087 55.000 5.36 5.36 43.40 3.24
2396 3912 4.425577 AGCTGCACTTTTTATTTCTCCG 57.574 40.909 1.02 0.00 0.00 4.63
2451 3976 4.951715 TCAGCCAATAACTAGAAGTCCGTA 59.048 41.667 0.00 0.00 0.00 4.02
2453 3978 4.386867 TCAGCCAATAACTAGAAGTCCG 57.613 45.455 0.00 0.00 0.00 4.79
2839 4745 4.163839 GGATATCCTCTAATGGCAGCATCT 59.836 45.833 14.97 0.00 0.00 2.90
3089 5039 6.405278 AACCCAACTTGTAGAAAAGGAATG 57.595 37.500 0.00 0.00 0.00 2.67
3516 5517 4.083003 TCACTTTCGTGCCAAAATATGACC 60.083 41.667 0.00 0.00 40.99 4.02
3621 5636 3.935203 ACCTGAATCAATAGCTTCACACG 59.065 43.478 0.00 0.00 0.00 4.49
3655 5670 6.294176 CCAGCATTCCTGTTGTATTATAAGCC 60.294 42.308 0.00 0.00 40.06 4.35
3668 5686 7.284034 CAGTTTATAGAAATCCAGCATTCCTGT 59.716 37.037 0.00 0.00 40.06 4.00
3818 5838 1.409381 GCCCTTCTCTGCAGCCTTTAT 60.409 52.381 9.47 0.00 0.00 1.40
3896 5916 5.626955 GTGACAAAAAGAGCATTCTTACTGC 59.373 40.000 0.00 0.00 42.80 4.40
4132 12384 8.757982 ATCTGACTAAATTAAAGACATGGCAT 57.242 30.769 0.00 0.00 0.00 4.40
4566 19031 5.073144 AGGAGGATAAACTTTGACAGTTCCA 59.927 40.000 0.00 0.00 45.77 3.53
4584 19049 0.261991 ACGAGGCTGGAATAGGAGGA 59.738 55.000 2.65 0.00 0.00 3.71
4598 19063 0.521867 CACATGCGCATTTGACGAGG 60.522 55.000 28.24 13.90 0.00 4.63
4829 20864 4.507710 CAATGTACCTGTGTGTAGAGCAT 58.492 43.478 0.00 0.00 0.00 3.79
4889 20925 6.968263 TTGTAATGGAGGAACATGTTTCAA 57.032 33.333 19.13 4.75 0.00 2.69
4933 20972 3.650139 GCATTGCCCAGATCAATCAATC 58.350 45.455 0.00 0.00 32.30 2.67
4962 21002 2.419673 TGCATGCCAAAGTAACAGATCG 59.580 45.455 16.68 0.00 0.00 3.69
5127 21221 4.038642 GCAACTAACCACCTCAAATTCCAA 59.961 41.667 0.00 0.00 0.00 3.53
5169 21263 3.617284 CATAGGTACAAGGACCCAAACC 58.383 50.000 0.00 0.00 40.74 3.27
5174 21268 2.841881 TGTTCCATAGGTACAAGGACCC 59.158 50.000 0.00 0.00 40.74 4.46
5242 21336 1.059549 CGAAAAATTGCAGCGCCATTC 59.940 47.619 2.29 0.00 0.00 2.67
5262 21356 3.075866 GCCTGCAGCAGATAAAACATC 57.924 47.619 24.90 0.00 42.97 3.06
5307 21402 3.438360 GCTCCTGTTTGACAACAACTTG 58.562 45.455 0.00 0.00 42.53 3.16
5352 21447 0.031994 CACCAAAAGCCCTTTGTCCG 59.968 55.000 7.80 0.00 42.57 4.79
5392 21487 1.112315 TTTGCCCACTTTGGACGCAT 61.112 50.000 0.00 0.00 40.96 4.73
5503 21611 2.935849 TGCGCACGTCAGAATCAAATAT 59.064 40.909 5.66 0.00 0.00 1.28
5757 21904 8.706322 ACAAAGAAGGGTCAAATTGTACTAAT 57.294 30.769 0.00 0.00 30.32 1.73
5764 21911 7.710475 ACATTGTTACAAAGAAGGGTCAAATTG 59.290 33.333 7.34 0.00 0.00 2.32
5772 21919 4.513692 TCACGACATTGTTACAAAGAAGGG 59.486 41.667 7.34 2.20 0.00 3.95
5810 21957 1.834378 CAGCTCCATCGCCTCCCTA 60.834 63.158 0.00 0.00 0.00 3.53
5825 21972 1.093159 CAGGGCAAGATCACTTCAGC 58.907 55.000 0.00 0.00 33.70 4.26
5923 22074 7.339466 AGGTAGCATAATTCAAAGTTTAGTGGG 59.661 37.037 0.00 0.00 0.00 4.61
5941 22092 8.980481 ACTACATTAAAAGCATAAGGTAGCAT 57.020 30.769 19.62 7.08 46.39 3.79
5965 22116 3.561725 GCTACAGCCCATGAGTGAATTAC 59.438 47.826 0.00 0.00 34.31 1.89
6014 22165 7.920682 CACAAAACCAACTCAAAATAAGTAGCT 59.079 33.333 0.00 0.00 0.00 3.32
6027 22178 6.255670 GGATTTGAGTTTCACAAAACCAACTC 59.744 38.462 12.40 4.31 44.87 3.01
6109 22260 8.701908 AGTATCATGATATTCTGCCAAACATT 57.298 30.769 18.18 0.00 0.00 2.71
6169 22320 3.295734 GCGCATTGGAGCTATCTCA 57.704 52.632 0.30 0.00 41.13 3.27
6214 22365 1.770294 TCAAAGTCTGGCGGGTTTTT 58.230 45.000 0.00 0.00 0.00 1.94
6215 22366 1.770294 TTCAAAGTCTGGCGGGTTTT 58.230 45.000 0.00 0.00 0.00 2.43
6216 22367 1.886542 GATTCAAAGTCTGGCGGGTTT 59.113 47.619 0.00 0.00 0.00 3.27
6217 22368 1.202879 TGATTCAAAGTCTGGCGGGTT 60.203 47.619 0.00 0.00 0.00 4.11
6218 22369 0.400213 TGATTCAAAGTCTGGCGGGT 59.600 50.000 0.00 0.00 0.00 5.28
6219 22370 1.402968 CATGATTCAAAGTCTGGCGGG 59.597 52.381 0.00 0.00 0.00 6.13
6220 22371 1.402968 CCATGATTCAAAGTCTGGCGG 59.597 52.381 0.00 0.00 0.00 6.13
6221 22372 1.202222 GCCATGATTCAAAGTCTGGCG 60.202 52.381 11.38 0.00 39.70 5.69
6222 22373 1.202222 CGCCATGATTCAAAGTCTGGC 60.202 52.381 15.30 15.30 44.43 4.85
6223 22374 1.202222 GCGCCATGATTCAAAGTCTGG 60.202 52.381 0.00 0.00 0.00 3.86
6224 22375 1.202222 GGCGCCATGATTCAAAGTCTG 60.202 52.381 24.80 0.00 0.00 3.51
6225 22376 1.098050 GGCGCCATGATTCAAAGTCT 58.902 50.000 24.80 0.00 0.00 3.24
6226 22377 1.098050 AGGCGCCATGATTCAAAGTC 58.902 50.000 31.54 0.00 0.00 3.01
6227 22378 1.549203 AAGGCGCCATGATTCAAAGT 58.451 45.000 31.54 0.00 0.00 2.66
6228 22379 2.165030 AGAAAGGCGCCATGATTCAAAG 59.835 45.455 31.54 0.00 0.00 2.77
6229 22380 2.170166 AGAAAGGCGCCATGATTCAAA 58.830 42.857 31.54 0.00 0.00 2.69
6230 22381 1.838112 AGAAAGGCGCCATGATTCAA 58.162 45.000 31.54 0.00 0.00 2.69
6231 22382 1.838112 AAGAAAGGCGCCATGATTCA 58.162 45.000 31.54 0.00 0.00 2.57
6232 22383 2.094545 ACAAAGAAAGGCGCCATGATTC 60.095 45.455 31.54 24.50 0.00 2.52
6233 22384 1.895131 ACAAAGAAAGGCGCCATGATT 59.105 42.857 31.54 17.67 0.00 2.57
6234 22385 1.549203 ACAAAGAAAGGCGCCATGAT 58.451 45.000 31.54 11.49 0.00 2.45
6235 22386 2.192664 TACAAAGAAAGGCGCCATGA 57.807 45.000 31.54 0.00 0.00 3.07
6236 22387 2.228822 ACTTACAAAGAAAGGCGCCATG 59.771 45.455 31.54 18.47 0.00 3.66
6237 22388 2.514803 ACTTACAAAGAAAGGCGCCAT 58.485 42.857 31.54 15.82 0.00 4.40
6238 22389 1.975660 ACTTACAAAGAAAGGCGCCA 58.024 45.000 31.54 0.00 0.00 5.69
6239 22390 3.501062 AGTAACTTACAAAGAAAGGCGCC 59.499 43.478 21.89 21.89 0.00 6.53
6240 22391 4.464112 CAGTAACTTACAAAGAAAGGCGC 58.536 43.478 0.00 0.00 0.00 6.53
6241 22392 4.514066 ACCAGTAACTTACAAAGAAAGGCG 59.486 41.667 1.79 0.00 0.00 5.52
6242 22393 6.387041 AACCAGTAACTTACAAAGAAAGGC 57.613 37.500 1.79 0.00 0.00 4.35
6243 22394 8.672823 AGTAACCAGTAACTTACAAAGAAAGG 57.327 34.615 1.79 0.00 0.00 3.11
6270 22421 9.495572 TTGAGTTTCACAAAACCAACTTAAAAT 57.504 25.926 0.00 0.00 44.87 1.82
6271 22422 8.888579 TTGAGTTTCACAAAACCAACTTAAAA 57.111 26.923 0.00 0.00 44.87 1.52
6272 22423 8.145122 ACTTGAGTTTCACAAAACCAACTTAAA 58.855 29.630 0.00 0.00 44.87 1.52
6273 22424 7.662897 ACTTGAGTTTCACAAAACCAACTTAA 58.337 30.769 0.00 0.00 44.87 1.85
6274 22425 7.222000 ACTTGAGTTTCACAAAACCAACTTA 57.778 32.000 0.00 0.00 44.87 2.24
6275 22426 6.096673 ACTTGAGTTTCACAAAACCAACTT 57.903 33.333 0.00 0.00 44.87 2.66
6276 22427 5.336451 GGACTTGAGTTTCACAAAACCAACT 60.336 40.000 0.00 0.00 44.87 3.16
6277 22428 4.862574 GGACTTGAGTTTCACAAAACCAAC 59.137 41.667 0.00 0.00 44.87 3.77
6278 22429 4.770010 AGGACTTGAGTTTCACAAAACCAA 59.230 37.500 0.00 2.44 44.87 3.67
6279 22430 4.157656 CAGGACTTGAGTTTCACAAAACCA 59.842 41.667 0.00 0.00 44.87 3.67
6280 22431 4.157840 ACAGGACTTGAGTTTCACAAAACC 59.842 41.667 0.00 0.00 44.87 3.27
6281 22432 5.310720 ACAGGACTTGAGTTTCACAAAAC 57.689 39.130 0.00 0.00 44.24 2.43
6282 22433 5.975693 AACAGGACTTGAGTTTCACAAAA 57.024 34.783 0.00 0.00 0.00 2.44
6283 22434 5.975693 AAACAGGACTTGAGTTTCACAAA 57.024 34.783 0.00 0.00 30.19 2.83
6284 22435 5.975693 AAAACAGGACTTGAGTTTCACAA 57.024 34.783 0.00 0.00 34.64 3.33
6285 22436 5.975693 AAAAACAGGACTTGAGTTTCACA 57.024 34.783 0.00 0.00 34.64 3.58
6304 22455 4.724399 TGCCAGACTTCCATACAGAAAAA 58.276 39.130 0.00 0.00 0.00 1.94
6305 22456 4.326826 CTGCCAGACTTCCATACAGAAAA 58.673 43.478 0.00 0.00 0.00 2.29
6306 22457 3.869912 GCTGCCAGACTTCCATACAGAAA 60.870 47.826 0.00 0.00 0.00 2.52
6307 22458 2.355108 GCTGCCAGACTTCCATACAGAA 60.355 50.000 0.00 0.00 0.00 3.02
6308 22459 1.208052 GCTGCCAGACTTCCATACAGA 59.792 52.381 0.00 0.00 0.00 3.41
6309 22460 1.065926 TGCTGCCAGACTTCCATACAG 60.066 52.381 0.00 0.00 0.00 2.74
6310 22461 0.983467 TGCTGCCAGACTTCCATACA 59.017 50.000 0.00 0.00 0.00 2.29
6311 22462 1.208052 TCTGCTGCCAGACTTCCATAC 59.792 52.381 0.00 0.00 42.98 2.39
6312 22463 1.571955 TCTGCTGCCAGACTTCCATA 58.428 50.000 0.00 0.00 42.98 2.74
6313 22464 2.380365 TCTGCTGCCAGACTTCCAT 58.620 52.632 0.00 0.00 42.98 3.41
6314 22465 3.890313 TCTGCTGCCAGACTTCCA 58.110 55.556 0.00 0.00 42.98 3.53
6321 22472 3.404224 AGTATCATGATCTGCTGCCAG 57.596 47.619 12.53 0.00 40.54 4.85
6322 22473 4.828829 CATAGTATCATGATCTGCTGCCA 58.171 43.478 12.53 0.00 0.00 4.92
6323 22474 3.622163 GCATAGTATCATGATCTGCTGCC 59.378 47.826 12.53 5.40 0.00 4.85
6324 22475 4.251268 TGCATAGTATCATGATCTGCTGC 58.749 43.478 12.53 18.90 0.00 5.25
6325 22476 6.371825 ACAATGCATAGTATCATGATCTGCTG 59.628 38.462 12.53 13.47 0.00 4.41
6326 22477 6.473758 ACAATGCATAGTATCATGATCTGCT 58.526 36.000 12.53 11.40 0.00 4.24
6327 22478 6.370718 TGACAATGCATAGTATCATGATCTGC 59.629 38.462 12.53 16.39 0.00 4.26
6328 22479 7.900782 TGACAATGCATAGTATCATGATCTG 57.099 36.000 12.53 7.23 0.00 2.90
6329 22480 9.516546 AATTGACAATGCATAGTATCATGATCT 57.483 29.630 12.53 11.55 0.00 2.75
6330 22481 9.770503 GAATTGACAATGCATAGTATCATGATC 57.229 33.333 12.53 4.31 0.00 2.92
6331 22482 8.737175 GGAATTGACAATGCATAGTATCATGAT 58.263 33.333 13.81 13.81 0.00 2.45
6332 22483 7.175467 GGGAATTGACAATGCATAGTATCATGA 59.825 37.037 8.45 0.00 0.00 3.07
6333 22484 7.040271 TGGGAATTGACAATGCATAGTATCATG 60.040 37.037 8.45 0.00 0.00 3.07
6334 22485 7.005902 TGGGAATTGACAATGCATAGTATCAT 58.994 34.615 8.45 0.00 0.00 2.45
6335 22486 6.363882 TGGGAATTGACAATGCATAGTATCA 58.636 36.000 8.45 0.00 0.00 2.15
6336 22487 6.882610 TGGGAATTGACAATGCATAGTATC 57.117 37.500 8.45 0.00 0.00 2.24
6337 22488 7.119699 CGTATGGGAATTGACAATGCATAGTAT 59.880 37.037 8.45 0.00 0.00 2.12
6338 22489 6.426633 CGTATGGGAATTGACAATGCATAGTA 59.573 38.462 8.45 0.00 0.00 1.82
6339 22490 5.239306 CGTATGGGAATTGACAATGCATAGT 59.761 40.000 8.45 0.00 0.00 2.12
6340 22491 5.239306 ACGTATGGGAATTGACAATGCATAG 59.761 40.000 8.45 0.00 0.00 2.23
6341 22492 5.129634 ACGTATGGGAATTGACAATGCATA 58.870 37.500 8.45 0.00 0.00 3.14
6342 22493 3.953612 ACGTATGGGAATTGACAATGCAT 59.046 39.130 8.45 0.00 0.00 3.96
6343 22494 3.351740 ACGTATGGGAATTGACAATGCA 58.648 40.909 8.45 0.00 0.00 3.96
6344 22495 4.370364 AACGTATGGGAATTGACAATGC 57.630 40.909 0.34 0.00 0.00 3.56
6345 22496 4.562394 GCAAACGTATGGGAATTGACAATG 59.438 41.667 0.34 0.00 0.00 2.82
6346 22497 4.462483 AGCAAACGTATGGGAATTGACAAT 59.538 37.500 0.00 0.00 0.00 2.71
6347 22498 3.823873 AGCAAACGTATGGGAATTGACAA 59.176 39.130 0.00 0.00 0.00 3.18
6348 22499 3.190327 CAGCAAACGTATGGGAATTGACA 59.810 43.478 0.00 0.00 0.00 3.58
6349 22500 3.438781 TCAGCAAACGTATGGGAATTGAC 59.561 43.478 0.00 0.00 0.00 3.18
6350 22501 3.680490 TCAGCAAACGTATGGGAATTGA 58.320 40.909 0.00 0.00 0.00 2.57
6351 22502 4.637483 ATCAGCAAACGTATGGGAATTG 57.363 40.909 0.00 0.00 0.00 2.32
6352 22503 5.680619 TCTATCAGCAAACGTATGGGAATT 58.319 37.500 0.00 0.00 0.00 2.17
6353 22504 5.290493 TCTATCAGCAAACGTATGGGAAT 57.710 39.130 0.00 0.00 0.00 3.01
6354 22505 4.746535 TCTATCAGCAAACGTATGGGAA 57.253 40.909 0.00 0.00 0.00 3.97
6355 22506 4.343814 TCATCTATCAGCAAACGTATGGGA 59.656 41.667 0.00 0.00 0.00 4.37
6356 22507 4.631131 TCATCTATCAGCAAACGTATGGG 58.369 43.478 0.00 0.00 0.00 4.00
6357 22508 5.532557 TCTCATCTATCAGCAAACGTATGG 58.467 41.667 0.00 0.00 0.00 2.74
6358 22509 7.009083 GCTATCTCATCTATCAGCAAACGTATG 59.991 40.741 0.00 0.00 0.00 2.39
6359 22510 7.032580 GCTATCTCATCTATCAGCAAACGTAT 58.967 38.462 0.00 0.00 0.00 3.06
6360 22511 6.207614 AGCTATCTCATCTATCAGCAAACGTA 59.792 38.462 0.00 0.00 0.00 3.57
6361 22512 5.010516 AGCTATCTCATCTATCAGCAAACGT 59.989 40.000 0.00 0.00 0.00 3.99
6362 22513 5.345472 CAGCTATCTCATCTATCAGCAAACG 59.655 44.000 0.00 0.00 0.00 3.60
6363 22514 5.120519 GCAGCTATCTCATCTATCAGCAAAC 59.879 44.000 0.00 0.00 0.00 2.93
6364 22515 5.236282 GCAGCTATCTCATCTATCAGCAAA 58.764 41.667 0.00 0.00 0.00 3.68
6365 22516 4.322574 GGCAGCTATCTCATCTATCAGCAA 60.323 45.833 0.00 0.00 0.00 3.91
6366 22517 3.195182 GGCAGCTATCTCATCTATCAGCA 59.805 47.826 0.00 0.00 0.00 4.41
6367 22518 3.195182 TGGCAGCTATCTCATCTATCAGC 59.805 47.826 0.00 0.00 0.00 4.26
6368 22519 4.381825 GGTGGCAGCTATCTCATCTATCAG 60.382 50.000 9.90 0.00 0.00 2.90
6369 22520 3.513119 GGTGGCAGCTATCTCATCTATCA 59.487 47.826 9.90 0.00 0.00 2.15
6370 22521 3.513119 TGGTGGCAGCTATCTCATCTATC 59.487 47.826 18.53 0.00 0.00 2.08
6371 22522 3.514539 TGGTGGCAGCTATCTCATCTAT 58.485 45.455 18.53 0.00 0.00 1.98
6372 22523 2.962859 TGGTGGCAGCTATCTCATCTA 58.037 47.619 18.53 0.00 0.00 1.98
6373 22524 1.798626 TGGTGGCAGCTATCTCATCT 58.201 50.000 18.53 0.00 0.00 2.90
6374 22525 2.812591 CAATGGTGGCAGCTATCTCATC 59.187 50.000 18.53 0.00 0.00 2.92
6375 22526 2.860009 CAATGGTGGCAGCTATCTCAT 58.140 47.619 18.53 0.00 0.00 2.90
6376 22527 1.748244 GCAATGGTGGCAGCTATCTCA 60.748 52.381 18.53 0.00 0.00 3.27
6377 22528 0.950116 GCAATGGTGGCAGCTATCTC 59.050 55.000 18.53 0.00 0.00 2.75
6378 22529 0.256752 TGCAATGGTGGCAGCTATCT 59.743 50.000 18.53 0.00 36.11 1.98
6379 22530 1.105457 TTGCAATGGTGGCAGCTATC 58.895 50.000 18.53 5.21 43.05 2.08
6380 22531 1.559368 TTTGCAATGGTGGCAGCTAT 58.441 45.000 18.53 7.00 43.05 2.97
6381 22532 1.477700 GATTTGCAATGGTGGCAGCTA 59.522 47.619 18.53 4.78 43.05 3.32
6382 22533 0.248289 GATTTGCAATGGTGGCAGCT 59.752 50.000 18.53 0.36 43.05 4.24
6383 22534 0.248289 AGATTTGCAATGGTGGCAGC 59.752 50.000 10.30 10.30 43.05 5.25
6384 22535 2.739913 CAAAGATTTGCAATGGTGGCAG 59.260 45.455 0.00 0.00 43.05 4.85
6385 22536 2.367894 TCAAAGATTTGCAATGGTGGCA 59.632 40.909 0.00 0.00 40.00 4.92
6386 22537 2.738314 GTCAAAGATTTGCAATGGTGGC 59.262 45.455 0.00 0.00 38.05 5.01
6387 22538 3.244146 TGGTCAAAGATTTGCAATGGTGG 60.244 43.478 0.00 0.00 38.05 4.61
6388 22539 3.991773 CTGGTCAAAGATTTGCAATGGTG 59.008 43.478 0.00 0.00 38.05 4.17
6389 22540 3.896888 TCTGGTCAAAGATTTGCAATGGT 59.103 39.130 0.00 0.00 38.05 3.55
6390 22541 4.524316 TCTGGTCAAAGATTTGCAATGG 57.476 40.909 0.00 0.00 38.05 3.16
6403 22554 8.190326 TCAGAGTAAAGTAGAAATCTGGTCAA 57.810 34.615 0.00 0.00 35.87 3.18
6414 22565 6.995686 TGCAATGGTTTTCAGAGTAAAGTAGA 59.004 34.615 0.00 0.00 0.00 2.59
6421 22572 4.460263 ACAGTGCAATGGTTTTCAGAGTA 58.540 39.130 19.57 0.00 0.00 2.59
6425 22576 3.996150 AGACAGTGCAATGGTTTTCAG 57.004 42.857 19.57 0.00 0.00 3.02
6428 22579 3.056607 GGCATAGACAGTGCAATGGTTTT 60.057 43.478 19.57 0.00 44.25 2.43
6430 22581 2.094675 GGCATAGACAGTGCAATGGTT 58.905 47.619 19.57 8.43 44.25 3.67
6432 22583 1.027357 GGGCATAGACAGTGCAATGG 58.973 55.000 19.57 0.76 44.25 3.16
6436 22587 2.040278 AGAAAAGGGCATAGACAGTGCA 59.960 45.455 0.29 0.00 44.25 4.57
6438 22589 4.583871 AGAAGAAAAGGGCATAGACAGTG 58.416 43.478 0.00 0.00 0.00 3.66
6439 22590 4.917906 AGAAGAAAAGGGCATAGACAGT 57.082 40.909 0.00 0.00 0.00 3.55
6440 22591 5.495640 AGAAGAAGAAAAGGGCATAGACAG 58.504 41.667 0.00 0.00 0.00 3.51
6441 22592 5.505181 AGAAGAAGAAAAGGGCATAGACA 57.495 39.130 0.00 0.00 0.00 3.41
6442 22593 6.825944 AAAGAAGAAGAAAAGGGCATAGAC 57.174 37.500 0.00 0.00 0.00 2.59
6443 22594 7.839680 AAAAAGAAGAAGAAAAGGGCATAGA 57.160 32.000 0.00 0.00 0.00 1.98
6468 22619 0.674581 CATGAACAGAGCCCTCGCAA 60.675 55.000 0.00 0.00 37.52 4.85
6471 22622 1.153289 CCCATGAACAGAGCCCTCG 60.153 63.158 0.00 0.00 34.09 4.63
6473 22624 1.668826 TTACCCATGAACAGAGCCCT 58.331 50.000 0.00 0.00 0.00 5.19
6476 22627 4.392940 AGCATATTACCCATGAACAGAGC 58.607 43.478 0.00 0.00 0.00 4.09
6477 22628 5.614308 TGAGCATATTACCCATGAACAGAG 58.386 41.667 0.00 0.00 0.00 3.35
6478 22629 5.628797 TGAGCATATTACCCATGAACAGA 57.371 39.130 0.00 0.00 0.00 3.41
6488 22639 8.023050 CAGCTAACTGTAATGAGCATATTACC 57.977 38.462 15.96 4.65 40.93 2.85
6511 22746 2.289882 TGATTTCAGAGGTGCTCCACAG 60.290 50.000 7.70 0.00 35.86 3.66
6524 22759 6.401394 TGAGGAGATACAACTGTGATTTCAG 58.599 40.000 0.00 0.00 40.80 3.02
6525 22760 6.358974 TGAGGAGATACAACTGTGATTTCA 57.641 37.500 0.00 0.00 0.00 2.69
6533 22768 7.437565 CACATTCTACATGAGGAGATACAACTG 59.562 40.741 0.00 0.00 0.00 3.16
6542 22777 3.620374 GCACACACATTCTACATGAGGAG 59.380 47.826 0.00 0.00 0.00 3.69
6543 22778 3.261643 AGCACACACATTCTACATGAGGA 59.738 43.478 0.00 0.00 0.00 3.71
6546 22781 4.002982 GGAAGCACACACATTCTACATGA 58.997 43.478 0.00 0.00 0.00 3.07
6547 22782 4.005650 AGGAAGCACACACATTCTACATG 58.994 43.478 0.00 0.00 0.00 3.21
6549 22784 3.324846 AGAGGAAGCACACACATTCTACA 59.675 43.478 0.00 0.00 0.00 2.74
6555 22790 2.105477 ACTTGAGAGGAAGCACACACAT 59.895 45.455 0.00 0.00 0.00 3.21
6565 22800 5.623956 TTAACACTTGGACTTGAGAGGAA 57.376 39.130 0.00 0.00 0.00 3.36
6568 22803 7.064016 GCTAGATTTAACACTTGGACTTGAGAG 59.936 40.741 0.00 0.00 0.00 3.20
6573 22808 9.686683 ATAATGCTAGATTTAACACTTGGACTT 57.313 29.630 0.00 0.00 0.00 3.01
6598 22833 6.852404 TGGGAGGCTAAAAGAAAGCATATAT 58.148 36.000 0.00 0.00 41.93 0.86
6601 22836 4.018415 ACTGGGAGGCTAAAAGAAAGCATA 60.018 41.667 0.00 0.00 41.93 3.14
6603 22838 2.108250 ACTGGGAGGCTAAAAGAAAGCA 59.892 45.455 0.00 0.00 41.93 3.91
6604 22839 2.489722 CACTGGGAGGCTAAAAGAAAGC 59.510 50.000 0.00 0.00 39.33 3.51
6621 22862 3.616821 CCATGATGCAAAATCAAGCACTG 59.383 43.478 0.00 0.00 44.49 3.66
6623 22864 3.852286 TCCATGATGCAAAATCAAGCAC 58.148 40.909 0.00 0.00 44.49 4.40
6625 22866 5.839621 ACTATCCATGATGCAAAATCAAGC 58.160 37.500 0.00 0.00 0.00 4.01
6626 22867 7.977293 TGAAACTATCCATGATGCAAAATCAAG 59.023 33.333 0.00 0.00 0.00 3.02
6627 22868 7.838884 TGAAACTATCCATGATGCAAAATCAA 58.161 30.769 0.00 0.00 0.00 2.57
6628 22869 7.407393 TGAAACTATCCATGATGCAAAATCA 57.593 32.000 0.00 0.00 0.00 2.57
6629 22870 7.597743 GGATGAAACTATCCATGATGCAAAATC 59.402 37.037 0.00 0.00 44.90 2.17
6630 22871 7.439381 GGATGAAACTATCCATGATGCAAAAT 58.561 34.615 0.00 0.00 44.90 1.82
6631 22872 6.808829 GGATGAAACTATCCATGATGCAAAA 58.191 36.000 0.00 0.00 44.90 2.44
6654 22895 4.082136 GCGGTACCAAGATTATCCTAGAGG 60.082 50.000 13.54 0.00 0.00 3.69
6655 22896 4.082136 GGCGGTACCAAGATTATCCTAGAG 60.082 50.000 13.54 0.00 38.86 2.43
6656 22897 3.830755 GGCGGTACCAAGATTATCCTAGA 59.169 47.826 13.54 0.00 38.86 2.43
6657 22898 4.189639 GGCGGTACCAAGATTATCCTAG 57.810 50.000 13.54 0.00 38.86 3.02
6671 22912 6.677913 AGCAATATAATTTTCATGGCGGTAC 58.322 36.000 0.00 0.00 0.00 3.34
6676 22917 7.486802 AGCAAAGCAATATAATTTTCATGGC 57.513 32.000 0.00 0.00 0.00 4.40
6677 22918 9.100554 TGAAGCAAAGCAATATAATTTTCATGG 57.899 29.630 0.00 0.00 0.00 3.66
6678 22919 9.910511 GTGAAGCAAAGCAATATAATTTTCATG 57.089 29.630 0.00 0.00 0.00 3.07
6687 22928 6.039270 GTGTATGGGTGAAGCAAAGCAATATA 59.961 38.462 0.00 0.00 0.00 0.86
6690 22931 3.056607 GTGTATGGGTGAAGCAAAGCAAT 60.057 43.478 0.00 0.00 0.00 3.56
6691 22932 2.295909 GTGTATGGGTGAAGCAAAGCAA 59.704 45.455 0.00 0.00 0.00 3.91
6694 22935 4.100707 CATGTGTATGGGTGAAGCAAAG 57.899 45.455 0.00 0.00 0.00 2.77
6706 22947 7.087409 TCAGCATAAAAGAACCATGTGTATG 57.913 36.000 0.00 0.00 0.00 2.39
6707 22948 7.886629 ATCAGCATAAAAGAACCATGTGTAT 57.113 32.000 0.00 0.00 0.00 2.29
6709 22950 6.594788 AATCAGCATAAAAGAACCATGTGT 57.405 33.333 0.00 0.00 0.00 3.72
6710 22951 5.740569 CGAATCAGCATAAAAGAACCATGTG 59.259 40.000 0.00 0.00 0.00 3.21
6711 22952 5.677091 GCGAATCAGCATAAAAGAACCATGT 60.677 40.000 0.00 0.00 37.05 3.21
6712 22953 4.736793 GCGAATCAGCATAAAAGAACCATG 59.263 41.667 0.00 0.00 37.05 3.66
6714 22955 4.009675 AGCGAATCAGCATAAAAGAACCA 58.990 39.130 0.00 0.00 40.15 3.67
6715 22956 4.622701 AGCGAATCAGCATAAAAGAACC 57.377 40.909 0.00 0.00 40.15 3.62
6717 22958 5.391950 GGTGAAGCGAATCAGCATAAAAGAA 60.392 40.000 13.16 0.00 44.99 2.52
6718 22959 4.094887 GGTGAAGCGAATCAGCATAAAAGA 59.905 41.667 13.16 0.00 44.99 2.52
6719 22960 4.346129 GGTGAAGCGAATCAGCATAAAAG 58.654 43.478 13.16 0.00 44.99 2.27
6720 22961 3.128589 GGGTGAAGCGAATCAGCATAAAA 59.871 43.478 17.87 0.00 46.89 1.52
6721 22962 2.682856 GGGTGAAGCGAATCAGCATAAA 59.317 45.455 17.87 0.00 46.89 1.40
6733 22999 4.606071 CCTCAAGAGGGTGAAGCG 57.394 61.111 8.28 0.00 44.87 4.68
6804 23071 9.573133 GAACAATGGATAATGGTGAAACTAAAG 57.427 33.333 0.00 0.00 36.74 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.