Multiple sequence alignment - TraesCS5B01G006500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G006500 chr5B 100.000 5702 0 0 1 5702 7710863 7705162 0.000000e+00 10530.0
1 TraesCS5B01G006500 chr5B 78.810 1109 210 15 3523 4611 36237761 36236658 0.000000e+00 723.0
2 TraesCS5B01G006500 chr5B 82.102 352 44 6 4716 5065 8089976 8089642 3.360000e-72 283.0
3 TraesCS5B01G006500 chr5B 80.857 350 53 11 4673 5011 37374795 37374449 4.380000e-66 263.0
4 TraesCS5B01G006500 chr5B 81.657 338 37 15 4677 5011 7936476 7936791 2.040000e-64 257.0
5 TraesCS5B01G006500 chr5B 92.079 101 4 1 1 101 7733932 7733836 7.700000e-29 139.0
6 TraesCS5B01G006500 chr5B 93.548 62 2 2 3156 3216 36238506 36238446 2.190000e-14 91.6
7 TraesCS5B01G006500 chr5B 100.000 32 0 0 1438 1469 36240905 36240874 6.170000e-05 60.2
8 TraesCS5B01G006500 chr5D 92.168 2043 98 31 30 2068 7505887 7503903 0.000000e+00 2830.0
9 TraesCS5B01G006500 chr5D 95.487 1662 61 7 3025 4676 7503031 7501374 0.000000e+00 2641.0
10 TraesCS5B01G006500 chr5D 92.824 864 46 7 2099 2958 7503906 7503055 0.000000e+00 1238.0
11 TraesCS5B01G006500 chr5D 82.254 355 44 6 4713 5065 7745983 7746320 7.230000e-74 289.0
12 TraesCS5B01G006500 chr5D 93.548 62 2 2 3156 3216 41605727 41605667 2.190000e-14 91.6
13 TraesCS5B01G006500 chr5D 82.353 68 10 2 4051 4117 458180559 458180493 2.220000e-04 58.4
14 TraesCS5B01G006500 chr5D 100.000 30 0 0 1440 1469 41608024 41607995 7.980000e-04 56.5
15 TraesCS5B01G006500 chr5A 91.859 2039 103 31 1 2013 4960948 4958947 0.000000e+00 2787.0
16 TraesCS5B01G006500 chr5A 95.747 1599 62 3 3027 4619 4958072 4956474 0.000000e+00 2571.0
17 TraesCS5B01G006500 chr5A 91.744 860 41 15 2099 2958 4958925 4958096 0.000000e+00 1168.0
18 TraesCS5B01G006500 chr5A 85.759 316 34 5 4676 4989 5718830 5718524 1.980000e-84 324.0
19 TraesCS5B01G006500 chr5A 83.708 356 41 5 4713 5065 4976875 4977216 2.560000e-83 320.0
20 TraesCS5B01G006500 chr5A 82.249 338 43 10 4728 5065 5994317 5993997 5.630000e-70 276.0
21 TraesCS5B01G006500 chr5A 93.548 62 2 2 3156 3216 29907115 29907055 2.190000e-14 91.6
22 TraesCS5B01G006500 chr5A 100.000 30 0 0 1440 1469 29909310 29909281 7.980000e-04 56.5
23 TraesCS5B01G006500 chr7D 88.622 2206 193 34 2462 4651 14784474 14782311 0.000000e+00 2630.0
24 TraesCS5B01G006500 chr7D 91.193 352 30 1 2109 2460 14794494 14794144 1.440000e-130 477.0
25 TraesCS5B01G006500 chr7D 87.342 237 29 1 1784 2020 14794832 14794597 2.620000e-68 270.0
26 TraesCS5B01G006500 chr6D 80.807 1412 238 25 3162 4554 3854279 3855676 0.000000e+00 1075.0
27 TraesCS5B01G006500 chr6D 77.959 980 190 21 3200 4169 129782860 129783823 1.770000e-164 590.0
28 TraesCS5B01G006500 chr6D 94.737 38 1 1 2034 2071 139566614 139566650 2.220000e-04 58.4
29 TraesCS5B01G006500 chr6B 79.497 1351 260 12 3220 4557 8787597 8786251 0.000000e+00 944.0
30 TraesCS5B01G006500 chr6B 78.141 979 188 21 3201 4169 228241323 228242285 2.940000e-167 599.0
31 TraesCS5B01G006500 chr6B 86.000 100 14 0 2861 2960 8789728 8789629 2.170000e-19 108.0
32 TraesCS5B01G006500 chr1A 92.892 619 35 7 5087 5702 324862362 324861750 0.000000e+00 891.0
33 TraesCS5B01G006500 chr1D 92.246 619 39 9 5087 5702 265675402 265674790 0.000000e+00 869.0
34 TraesCS5B01G006500 chr6A 78.163 980 188 21 3200 4169 168116986 168117949 8.170000e-168 601.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G006500 chr5B 7705162 7710863 5701 True 10530.000000 10530 100.000000 1 5702 1 chr5B.!!$R1 5701
1 TraesCS5B01G006500 chr5B 36236658 36240905 4247 True 291.600000 723 90.786000 1438 4611 3 chr5B.!!$R5 3173
2 TraesCS5B01G006500 chr5D 7501374 7505887 4513 True 2236.333333 2830 93.493000 30 4676 3 chr5D.!!$R2 4646
3 TraesCS5B01G006500 chr5A 4956474 4960948 4474 True 2175.333333 2787 93.116667 1 4619 3 chr5A.!!$R3 4618
4 TraesCS5B01G006500 chr7D 14782311 14784474 2163 True 2630.000000 2630 88.622000 2462 4651 1 chr7D.!!$R1 2189
5 TraesCS5B01G006500 chr7D 14794144 14794832 688 True 373.500000 477 89.267500 1784 2460 2 chr7D.!!$R2 676
6 TraesCS5B01G006500 chr6D 3854279 3855676 1397 False 1075.000000 1075 80.807000 3162 4554 1 chr6D.!!$F1 1392
7 TraesCS5B01G006500 chr6D 129782860 129783823 963 False 590.000000 590 77.959000 3200 4169 1 chr6D.!!$F2 969
8 TraesCS5B01G006500 chr6B 228241323 228242285 962 False 599.000000 599 78.141000 3201 4169 1 chr6B.!!$F1 968
9 TraesCS5B01G006500 chr6B 8786251 8789728 3477 True 526.000000 944 82.748500 2861 4557 2 chr6B.!!$R1 1696
10 TraesCS5B01G006500 chr1A 324861750 324862362 612 True 891.000000 891 92.892000 5087 5702 1 chr1A.!!$R1 615
11 TraesCS5B01G006500 chr1D 265674790 265675402 612 True 869.000000 869 92.246000 5087 5702 1 chr1D.!!$R1 615
12 TraesCS5B01G006500 chr6A 168116986 168117949 963 False 601.000000 601 78.163000 3200 4169 1 chr6A.!!$F1 969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
453 458 0.321996 AGCTGGGAGGTCGTTTTCTC 59.678 55.000 0.00 0.00 0.00 2.87 F
1862 2562 0.603707 CCACCACAGCGAGATGTTGT 60.604 55.000 0.00 0.00 43.48 3.32 F
2298 3066 1.002134 CAATGACCTCGGCAACCCT 60.002 57.895 0.00 0.00 0.00 4.34 F
2811 3701 0.105224 AACATGCTTGCTTGCTTGCA 59.895 45.000 13.04 13.04 40.39 4.08 F
2838 3728 0.392461 TCGATAGTTTGCCTGTGGCC 60.392 55.000 6.10 0.00 42.99 5.36 F
3568 6633 0.603707 CCTACATCATCGCCGCCAAT 60.604 55.000 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 2624 0.247460 CGATCCAGGAGTTGCAGTGA 59.753 55.000 0.00 0.0 0.00 3.41 R
2792 3675 0.105224 TGCAAGCAAGCAAGCATGTT 59.895 45.000 7.23 0.0 42.46 2.71 R
3322 6258 0.882474 CGTCGGTGAGGAAGAAGAGT 59.118 55.000 0.00 0.0 0.00 3.24 R
4677 7762 0.390603 CCGACCATGGCACTACGAAA 60.391 55.000 13.04 0.0 0.00 3.46 R
4678 7763 1.216977 CCGACCATGGCACTACGAA 59.783 57.895 13.04 0.0 0.00 3.85 R
5076 8161 0.475906 AGGGCTGCTTCACTTCAACT 59.524 50.000 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 43 6.546034 ACAAAAATAAGTAGGTGACAAGCACT 59.454 34.615 0.00 0.00 46.86 4.40
41 44 7.068226 ACAAAAATAAGTAGGTGACAAGCACTT 59.932 33.333 0.00 0.00 46.86 3.16
42 45 8.564574 CAAAAATAAGTAGGTGACAAGCACTTA 58.435 33.333 0.00 6.53 46.86 2.24
43 46 8.685838 AAAATAAGTAGGTGACAAGCACTTAA 57.314 30.769 7.65 0.00 46.86 1.85
155 158 4.093408 CAGAATCTCGAATGAAGCCGAAAA 59.907 41.667 0.00 0.00 34.17 2.29
160 163 2.478894 TCGAATGAAGCCGAAAAGACAC 59.521 45.455 0.00 0.00 0.00 3.67
196 199 3.306166 CGCGATCCAACGTCTAGAAATTT 59.694 43.478 0.00 0.00 35.59 1.82
199 202 5.724223 GCGATCCAACGTCTAGAAATTTGAC 60.724 44.000 0.00 0.00 35.59 3.18
377 382 2.297880 TGCATGCATTCCCATCATTAGC 59.702 45.455 18.46 0.00 0.00 3.09
394 399 2.443887 AGCAAACATTCACCATGCAC 57.556 45.000 0.00 0.00 39.42 4.57
395 400 1.001181 AGCAAACATTCACCATGCACC 59.999 47.619 0.00 0.00 39.42 5.01
417 422 0.610785 TTCCCTTTCGCAATGGGGAC 60.611 55.000 15.25 0.00 46.37 4.46
453 458 0.321996 AGCTGGGAGGTCGTTTTCTC 59.678 55.000 0.00 0.00 0.00 2.87
486 491 1.127567 TTGTCCACTGCCTAGCTGGT 61.128 55.000 0.00 0.00 38.35 4.00
487 492 1.078848 GTCCACTGCCTAGCTGGTG 60.079 63.158 0.00 0.00 38.35 4.17
492 497 1.261238 ACTGCCTAGCTGGTGGAGAC 61.261 60.000 12.32 0.00 38.35 3.36
639 644 1.986210 GGGGTACACGCCAGGTACT 60.986 63.158 10.37 0.00 46.98 2.73
652 657 2.817844 CCAGGTACTAGCCAAAACCAAC 59.182 50.000 0.00 0.00 36.02 3.77
734 739 3.493028 ATGGACCGTATGCATGCAA 57.507 47.368 26.68 11.45 38.09 4.08
738 743 1.467374 GGACCGTATGCATGCAAACAC 60.467 52.381 26.68 20.37 0.00 3.32
801 809 7.164826 CAGATCTAGATGCGCATGTTTAAAAAC 59.835 37.037 30.76 9.89 39.33 2.43
888 913 6.602803 TCTCTCTCTCTCTTGAGTAGTACGTA 59.397 42.308 0.00 0.00 40.98 3.57
889 914 6.563422 TCTCTCTCTCTTGAGTAGTACGTAC 58.437 44.000 18.10 18.10 40.98 3.67
890 915 5.659463 TCTCTCTCTTGAGTAGTACGTACC 58.341 45.833 21.80 7.94 40.98 3.34
910 935 8.136165 ACGTACCATTATTTTGAGTAGCTCTAG 58.864 37.037 0.00 0.00 0.00 2.43
913 938 7.501844 ACCATTATTTTGAGTAGCTCTAGACC 58.498 38.462 0.00 0.00 0.00 3.85
949 974 7.389803 TCAGTGAAAATGACAAGTCTTTTGA 57.610 32.000 12.85 5.77 35.16 2.69
989 1019 8.512138 AGAAAGGAAATTATTTTGAGTGTACGG 58.488 33.333 0.00 0.00 0.00 4.02
990 1020 7.989416 AAGGAAATTATTTTGAGTGTACGGA 57.011 32.000 0.00 0.00 0.00 4.69
1021 1053 6.098982 CGATCTATAAATAGGATCCAGGGCTT 59.901 42.308 15.82 2.33 0.00 4.35
1063 1095 1.753903 TCCATCACCCCTTCCTTTCA 58.246 50.000 0.00 0.00 0.00 2.69
1066 1098 3.026694 CCATCACCCCTTCCTTTCATTC 58.973 50.000 0.00 0.00 0.00 2.67
1128 1160 3.151022 GGCCCTCTCACTCCTCCG 61.151 72.222 0.00 0.00 0.00 4.63
1135 1167 1.755008 CTCACTCCTCCGTCCTCCC 60.755 68.421 0.00 0.00 0.00 4.30
1170 1202 2.378445 TTGTGTAGCGCAATAGCAGA 57.622 45.000 11.47 0.00 42.27 4.26
1203 1235 2.202703 ACGATGCTAACGGCGACC 60.203 61.111 16.62 0.00 45.43 4.79
1266 1298 4.403137 CGGCGGACGTTCGTGGTA 62.403 66.667 19.12 0.00 37.93 3.25
1363 1395 0.759812 TACCACCACCACCTTGTCGA 60.760 55.000 0.00 0.00 0.00 4.20
1476 1550 1.695893 CGGTGCACATGAGTAAGGCG 61.696 60.000 20.43 4.75 0.00 5.52
1497 1571 0.743345 CCGGGGTTCGTGATTTCCTC 60.743 60.000 0.00 0.00 37.11 3.71
1652 2085 7.621796 AGGGACAAGTAATTCTAGACGAAAAT 58.378 34.615 0.00 0.00 34.79 1.82
1653 2086 8.755977 AGGGACAAGTAATTCTAGACGAAAATA 58.244 33.333 0.00 0.00 34.79 1.40
1654 2087 9.374838 GGGACAAGTAATTCTAGACGAAAATAA 57.625 33.333 0.00 0.00 34.79 1.40
1862 2562 0.603707 CCACCACAGCGAGATGTTGT 60.604 55.000 0.00 0.00 43.48 3.32
1915 2624 2.355481 GAGTCCGCCGTCACGTTT 60.355 61.111 0.00 0.00 0.00 3.60
2001 2710 4.098960 GGTCGGTCAACTACTATCCAATCA 59.901 45.833 0.00 0.00 0.00 2.57
2055 2764 7.548196 TCAAAACGTCTTACATTTTGAGACT 57.452 32.000 9.26 0.00 43.74 3.24
2072 2781 8.603898 TTTGAGACTGAGGGAGTACATAAATA 57.396 34.615 0.00 0.00 33.83 1.40
2073 2782 7.825331 TGAGACTGAGGGAGTACATAAATAG 57.175 40.000 0.00 0.00 33.83 1.73
2081 2790 6.148186 AGGGAGTACATAAATAGGGTGCTTA 58.852 40.000 0.00 0.00 0.00 3.09
2083 2792 7.959721 AGGGAGTACATAAATAGGGTGCTTATA 59.040 37.037 0.00 0.00 0.00 0.98
2097 2806 7.830739 AGGGTGCTTATATTTTTGAGTTGAAG 58.169 34.615 0.00 0.00 0.00 3.02
2133 2901 7.054124 TGATCCCTTTACTGATTTACCATGTC 58.946 38.462 0.00 0.00 0.00 3.06
2298 3066 1.002134 CAATGACCTCGGCAACCCT 60.002 57.895 0.00 0.00 0.00 4.34
2358 3126 2.286197 AAGGAGCACCCCTACCCC 60.286 66.667 0.00 0.00 34.95 4.95
2406 3271 1.954382 AGCAAGAAAGACCCGTTTTCC 59.046 47.619 0.00 0.00 35.62 3.13
2562 3433 1.078848 CAAGGACCAGAGCTTCCCG 60.079 63.158 0.00 0.00 31.51 5.14
2602 3473 1.058404 GCTGTACGACGACAACTTCC 58.942 55.000 0.00 0.00 0.00 3.46
2649 3532 1.339151 GGGAAGCTCAGGTTCGTCATT 60.339 52.381 10.47 0.00 40.44 2.57
2733 3616 3.860536 GGATACGCAGAGTCTTCAAGTTC 59.139 47.826 0.00 0.00 0.00 3.01
2765 3648 5.329493 CGAGATTCATGACAGTACGTACAA 58.671 41.667 26.55 11.17 0.00 2.41
2792 3675 3.940852 AGATTCATTCATTGCTACGCACA 59.059 39.130 0.00 0.00 38.71 4.57
2793 3676 4.395854 AGATTCATTCATTGCTACGCACAA 59.604 37.500 0.00 0.00 38.71 3.33
2794 3677 3.469899 TCATTCATTGCTACGCACAAC 57.530 42.857 0.00 0.00 38.71 3.32
2795 3678 2.810852 TCATTCATTGCTACGCACAACA 59.189 40.909 0.00 0.00 38.71 3.33
2811 3701 0.105224 AACATGCTTGCTTGCTTGCA 59.895 45.000 13.04 13.04 40.39 4.08
2815 3705 2.068837 TGCTTGCTTGCTTGCATAAC 57.931 45.000 5.15 0.18 42.96 1.89
2829 3719 5.651172 TTGCATAACGGATCGATAGTTTG 57.349 39.130 19.51 17.18 37.40 2.93
2830 3720 3.493129 TGCATAACGGATCGATAGTTTGC 59.507 43.478 25.06 25.06 35.07 3.68
2831 3721 3.120649 GCATAACGGATCGATAGTTTGCC 60.121 47.826 23.48 12.24 31.89 4.52
2833 3723 2.225068 ACGGATCGATAGTTTGCCTG 57.775 50.000 0.00 0.00 37.40 4.85
2834 3724 1.480954 ACGGATCGATAGTTTGCCTGT 59.519 47.619 0.00 0.00 37.40 4.00
2836 3726 2.213499 GGATCGATAGTTTGCCTGTGG 58.787 52.381 0.00 0.00 37.40 4.17
2837 3727 1.599542 GATCGATAGTTTGCCTGTGGC 59.400 52.381 0.00 1.01 43.64 5.01
2838 3728 0.392461 TCGATAGTTTGCCTGTGGCC 60.392 55.000 6.10 0.00 42.99 5.36
2963 3936 3.585862 CAACTAGTCACGGTATGTTGCT 58.414 45.455 0.00 0.00 0.00 3.91
2968 3941 6.501781 ACTAGTCACGGTATGTTGCTATTAC 58.498 40.000 0.00 0.00 0.00 1.89
2981 3957 8.615878 ATGTTGCTATTACGGCTTTATTGATA 57.384 30.769 0.00 0.00 0.00 2.15
3014 4846 4.438472 GCTCTGCCTTTTCTATGAAAGCTG 60.438 45.833 0.00 0.00 35.73 4.24
3016 4848 3.760684 CTGCCTTTTCTATGAAAGCTGGT 59.239 43.478 0.00 0.00 35.73 4.00
3021 4853 6.173339 CCTTTTCTATGAAAGCTGGTCACTA 58.827 40.000 2.59 0.00 35.73 2.74
3023 4855 6.360370 TTTCTATGAAAGCTGGTCACTACT 57.640 37.500 2.59 0.00 0.00 2.57
3043 4879 7.014230 CACTACTCCTTTTTCCTTCATTTTCCA 59.986 37.037 0.00 0.00 0.00 3.53
3063 5671 6.840780 TCCAGGAAAGGAAAATTCTTCATC 57.159 37.500 0.00 0.00 33.93 2.92
3076 5684 8.447787 AAAATTCTTCATCGATTGTTTTACCG 57.552 30.769 0.00 0.00 0.00 4.02
3082 5690 6.978343 TCATCGATTGTTTTACCGATTTCT 57.022 33.333 0.00 0.00 39.40 2.52
3130 5798 3.044156 TCCTATCAAGAGCAAGCTGGAT 58.956 45.455 0.00 2.74 0.00 3.41
3146 5814 1.522569 GATGAGGCAACCTACGGCT 59.477 57.895 0.00 0.00 42.85 5.52
3217 5892 0.906282 TCATGACAGCTGAGGAGGCA 60.906 55.000 23.35 0.00 0.00 4.75
3226 6162 0.835941 CTGAGGAGGCAGTGGCTAAT 59.164 55.000 20.63 11.10 38.98 1.73
3230 6166 1.771255 AGGAGGCAGTGGCTAATAAGG 59.229 52.381 20.63 0.00 38.98 2.69
3242 6178 5.648092 GTGGCTAATAAGGAGTTGTTCATGT 59.352 40.000 0.00 0.00 0.00 3.21
3316 6252 1.671742 CACCACCTTGTACGGCTCT 59.328 57.895 0.00 0.00 0.00 4.09
3322 6258 3.964221 CTTGTACGGCTCTCGCGCA 62.964 63.158 8.75 0.00 43.89 6.09
3457 6429 2.125326 CGTCACGGGATCCTGGCTA 61.125 63.158 24.68 6.60 0.00 3.93
3568 6633 0.603707 CCTACATCATCGCCGCCAAT 60.604 55.000 0.00 0.00 0.00 3.16
3817 6882 0.905357 CGGTCAGGAAGGAGAATGGT 59.095 55.000 0.00 0.00 0.00 3.55
4204 7278 2.855280 CGACATGCGCGCATTCGTA 61.855 57.895 39.33 23.54 38.14 3.43
4237 7311 2.186826 GGTGCTGCTGGACACGTTT 61.187 57.895 16.64 0.00 37.68 3.60
4243 7317 1.300697 GCTGGACACGTTTCCGTCT 60.301 57.895 15.70 0.00 46.28 4.18
4270 7344 1.065926 CAGAGTGCCATAGTCCTTGCA 60.066 52.381 0.00 0.00 0.00 4.08
4321 7395 1.486310 GATGAGGAGTACATGGGCACA 59.514 52.381 0.00 0.00 0.00 4.57
4333 7407 2.280797 GGCACACACGAAGAGCCA 60.281 61.111 0.00 0.00 44.59 4.75
4429 7506 0.677288 TGGACGAGTGGAACAACGAT 59.323 50.000 0.00 0.00 44.16 3.73
4673 7758 6.597672 TCAGTGTGACCGAAAATGCTAATAAT 59.402 34.615 0.00 0.00 0.00 1.28
4676 7761 9.120538 AGTGTGACCGAAAATGCTAATAATATT 57.879 29.630 0.00 0.00 0.00 1.28
4677 7762 9.730420 GTGTGACCGAAAATGCTAATAATATTT 57.270 29.630 0.00 0.00 0.00 1.40
4688 7773 9.893305 AATGCTAATAATATTTTTCGTAGTGCC 57.107 29.630 0.00 0.00 0.00 5.01
4689 7774 8.439993 TGCTAATAATATTTTTCGTAGTGCCA 57.560 30.769 0.00 0.00 0.00 4.92
4690 7775 9.062524 TGCTAATAATATTTTTCGTAGTGCCAT 57.937 29.630 0.00 0.00 0.00 4.40
4691 7776 9.329913 GCTAATAATATTTTTCGTAGTGCCATG 57.670 33.333 0.00 0.00 0.00 3.66
4692 7777 9.825972 CTAATAATATTTTTCGTAGTGCCATGG 57.174 33.333 7.63 7.63 0.00 3.66
4693 7778 7.817418 ATAATATTTTTCGTAGTGCCATGGT 57.183 32.000 14.67 0.00 0.00 3.55
4694 7779 5.751243 ATATTTTTCGTAGTGCCATGGTC 57.249 39.130 14.67 6.41 0.00 4.02
4695 7780 1.434555 TTTTCGTAGTGCCATGGTCG 58.565 50.000 14.67 10.71 0.00 4.79
4696 7781 0.390603 TTTCGTAGTGCCATGGTCGG 60.391 55.000 14.67 3.15 0.00 4.79
4707 7792 3.631145 CCATGGTCGGCATGAATTAAG 57.369 47.619 2.57 0.00 32.09 1.85
4708 7793 2.294233 CCATGGTCGGCATGAATTAAGG 59.706 50.000 2.57 0.00 32.09 2.69
4709 7794 1.388547 TGGTCGGCATGAATTAAGGC 58.611 50.000 0.00 0.00 0.00 4.35
4710 7795 1.340502 TGGTCGGCATGAATTAAGGCA 60.341 47.619 1.16 0.00 0.00 4.75
4711 7796 1.956477 GGTCGGCATGAATTAAGGCAT 59.044 47.619 1.16 0.00 0.00 4.40
4712 7797 2.362077 GGTCGGCATGAATTAAGGCATT 59.638 45.455 1.16 0.00 0.00 3.56
4713 7798 3.550842 GGTCGGCATGAATTAAGGCATTC 60.551 47.826 1.16 0.00 34.23 2.67
4714 7799 3.066621 GTCGGCATGAATTAAGGCATTCA 59.933 43.478 1.16 1.75 45.20 2.57
4725 7810 8.801299 TGAATTAAGGCATTCATAGTTTCAACA 58.199 29.630 0.00 0.00 38.09 3.33
4726 7811 9.807649 GAATTAAGGCATTCATAGTTTCAACAT 57.192 29.630 0.00 0.00 33.87 2.71
4729 7814 9.679661 TTAAGGCATTCATAGTTTCAACATAGA 57.320 29.630 0.00 0.00 0.00 1.98
4730 7815 8.579850 AAGGCATTCATAGTTTCAACATAGAA 57.420 30.769 0.00 0.00 0.00 2.10
4731 7816 8.757982 AGGCATTCATAGTTTCAACATAGAAT 57.242 30.769 0.00 0.00 0.00 2.40
4732 7817 9.193806 AGGCATTCATAGTTTCAACATAGAATT 57.806 29.630 0.00 0.00 0.00 2.17
4740 7825 9.988350 ATAGTTTCAACATAGAATTAACTTGCG 57.012 29.630 0.00 0.00 0.00 4.85
4741 7826 7.305474 AGTTTCAACATAGAATTAACTTGCGG 58.695 34.615 0.00 0.00 0.00 5.69
4742 7827 7.174253 AGTTTCAACATAGAATTAACTTGCGGA 59.826 33.333 0.00 0.00 0.00 5.54
4743 7828 6.662414 TCAACATAGAATTAACTTGCGGAG 57.338 37.500 0.00 0.00 0.00 4.63
4744 7829 6.403049 TCAACATAGAATTAACTTGCGGAGA 58.597 36.000 0.00 0.00 0.00 3.71
4745 7830 7.047891 TCAACATAGAATTAACTTGCGGAGAT 58.952 34.615 0.00 0.00 0.00 2.75
4746 7831 8.201464 TCAACATAGAATTAACTTGCGGAGATA 58.799 33.333 0.00 0.00 0.00 1.98
4747 7832 8.993121 CAACATAGAATTAACTTGCGGAGATAT 58.007 33.333 0.00 0.00 0.00 1.63
4774 7859 5.502089 TTTGGCATCCAAATCATTTCCTT 57.498 34.783 6.91 0.00 46.92 3.36
4775 7860 4.475051 TGGCATCCAAATCATTTCCTTG 57.525 40.909 0.00 0.00 0.00 3.61
4776 7861 4.095211 TGGCATCCAAATCATTTCCTTGA 58.905 39.130 0.00 0.00 0.00 3.02
4777 7862 4.717778 TGGCATCCAAATCATTTCCTTGAT 59.282 37.500 0.00 0.00 37.96 2.57
4778 7863 5.163385 TGGCATCCAAATCATTTCCTTGATC 60.163 40.000 0.00 0.00 35.29 2.92
4779 7864 5.163385 GGCATCCAAATCATTTCCTTGATCA 60.163 40.000 0.00 0.00 35.29 2.92
4780 7865 6.342906 GCATCCAAATCATTTCCTTGATCAA 58.657 36.000 8.12 8.12 35.29 2.57
4781 7866 6.819649 GCATCCAAATCATTTCCTTGATCAAA 59.180 34.615 9.88 0.00 35.29 2.69
4782 7867 7.334921 GCATCCAAATCATTTCCTTGATCAAAA 59.665 33.333 9.88 1.39 35.29 2.44
4783 7868 9.391006 CATCCAAATCATTTCCTTGATCAAAAT 57.609 29.630 9.88 3.88 35.29 1.82
4784 7869 8.780846 TCCAAATCATTTCCTTGATCAAAATG 57.219 30.769 18.97 18.97 40.23 2.32
4785 7870 8.377034 TCCAAATCATTTCCTTGATCAAAATGT 58.623 29.630 22.01 12.35 39.96 2.71
4786 7871 9.005777 CCAAATCATTTCCTTGATCAAAATGTT 57.994 29.630 22.01 15.34 39.96 2.71
4788 7873 8.782339 AATCATTTCCTTGATCAAAATGTTCC 57.218 30.769 22.01 0.00 39.96 3.62
4789 7874 6.700352 TCATTTCCTTGATCAAAATGTTCCC 58.300 36.000 22.01 0.00 39.96 3.97
4790 7875 6.269538 TCATTTCCTTGATCAAAATGTTCCCA 59.730 34.615 22.01 7.82 39.96 4.37
4791 7876 6.491714 TTTCCTTGATCAAAATGTTCCCAA 57.508 33.333 9.88 0.00 0.00 4.12
4792 7877 5.467035 TCCTTGATCAAAATGTTCCCAAC 57.533 39.130 9.88 0.00 0.00 3.77
4793 7878 4.898265 TCCTTGATCAAAATGTTCCCAACA 59.102 37.500 9.88 0.00 46.94 3.33
4805 7890 5.506730 TGTTCCCAACATATGTCTACCAA 57.493 39.130 9.23 0.00 36.25 3.67
4806 7891 5.250200 TGTTCCCAACATATGTCTACCAAC 58.750 41.667 9.23 9.22 36.25 3.77
4807 7892 5.221945 TGTTCCCAACATATGTCTACCAACA 60.222 40.000 9.23 11.48 36.25 3.33
4808 7893 5.708736 TCCCAACATATGTCTACCAACAT 57.291 39.130 9.23 0.00 42.41 2.71
4809 7894 5.680619 TCCCAACATATGTCTACCAACATC 58.319 41.667 9.23 0.00 40.32 3.06
4810 7895 5.428457 TCCCAACATATGTCTACCAACATCT 59.572 40.000 9.23 0.00 40.32 2.90
4811 7896 6.069673 TCCCAACATATGTCTACCAACATCTT 60.070 38.462 9.23 0.00 40.32 2.40
4812 7897 6.603201 CCCAACATATGTCTACCAACATCTTT 59.397 38.462 9.23 0.00 40.32 2.52
4813 7898 7.122650 CCCAACATATGTCTACCAACATCTTTT 59.877 37.037 9.23 0.00 40.32 2.27
4814 7899 8.184192 CCAACATATGTCTACCAACATCTTTTC 58.816 37.037 9.23 0.00 40.32 2.29
4815 7900 8.950210 CAACATATGTCTACCAACATCTTTTCT 58.050 33.333 9.23 0.00 40.32 2.52
4820 7905 7.962964 TGTCTACCAACATCTTTTCTAACTG 57.037 36.000 0.00 0.00 0.00 3.16
4821 7906 6.934645 TGTCTACCAACATCTTTTCTAACTGG 59.065 38.462 0.00 0.00 0.00 4.00
4822 7907 5.938125 TCTACCAACATCTTTTCTAACTGGC 59.062 40.000 0.00 0.00 0.00 4.85
4823 7908 3.502211 ACCAACATCTTTTCTAACTGGCG 59.498 43.478 0.00 0.00 0.00 5.69
4824 7909 3.751175 CCAACATCTTTTCTAACTGGCGA 59.249 43.478 0.00 0.00 0.00 5.54
4825 7910 4.215399 CCAACATCTTTTCTAACTGGCGAA 59.785 41.667 0.00 0.00 0.00 4.70
4826 7911 5.278266 CCAACATCTTTTCTAACTGGCGAAA 60.278 40.000 0.00 0.00 0.00 3.46
4827 7912 6.381801 CAACATCTTTTCTAACTGGCGAAAT 58.618 36.000 0.00 0.00 0.00 2.17
4828 7913 6.575162 ACATCTTTTCTAACTGGCGAAATT 57.425 33.333 0.00 0.00 0.00 1.82
4829 7914 7.681939 ACATCTTTTCTAACTGGCGAAATTA 57.318 32.000 0.00 0.00 0.00 1.40
4830 7915 7.527457 ACATCTTTTCTAACTGGCGAAATTAC 58.473 34.615 0.00 0.00 0.00 1.89
4831 7916 7.174253 ACATCTTTTCTAACTGGCGAAATTACA 59.826 33.333 0.00 0.00 0.00 2.41
4832 7917 7.499321 TCTTTTCTAACTGGCGAAATTACAA 57.501 32.000 0.00 0.00 0.00 2.41
4833 7918 7.932335 TCTTTTCTAACTGGCGAAATTACAAA 58.068 30.769 0.00 0.00 0.00 2.83
4834 7919 8.407064 TCTTTTCTAACTGGCGAAATTACAAAA 58.593 29.630 0.00 0.00 0.00 2.44
4835 7920 8.928270 TTTTCTAACTGGCGAAATTACAAAAA 57.072 26.923 0.00 0.00 0.00 1.94
4836 7921 8.568732 TTTCTAACTGGCGAAATTACAAAAAG 57.431 30.769 0.00 0.00 0.00 2.27
4837 7922 7.266922 TCTAACTGGCGAAATTACAAAAAGT 57.733 32.000 0.00 0.00 0.00 2.66
4838 7923 7.357303 TCTAACTGGCGAAATTACAAAAAGTC 58.643 34.615 0.00 0.00 0.00 3.01
4839 7924 5.508200 ACTGGCGAAATTACAAAAAGTCA 57.492 34.783 0.00 0.00 0.00 3.41
4840 7925 5.897050 ACTGGCGAAATTACAAAAAGTCAA 58.103 33.333 0.00 0.00 0.00 3.18
4841 7926 5.977129 ACTGGCGAAATTACAAAAAGTCAAG 59.023 36.000 0.00 0.00 0.00 3.02
4842 7927 6.137794 TGGCGAAATTACAAAAAGTCAAGA 57.862 33.333 0.00 0.00 0.00 3.02
4843 7928 6.205784 TGGCGAAATTACAAAAAGTCAAGAG 58.794 36.000 0.00 0.00 0.00 2.85
4844 7929 6.183360 TGGCGAAATTACAAAAAGTCAAGAGT 60.183 34.615 0.00 0.00 0.00 3.24
4845 7930 6.142320 GGCGAAATTACAAAAAGTCAAGAGTG 59.858 38.462 0.00 0.00 0.00 3.51
4846 7931 6.691388 GCGAAATTACAAAAAGTCAAGAGTGT 59.309 34.615 0.00 0.00 0.00 3.55
4847 7932 7.097006 GCGAAATTACAAAAAGTCAAGAGTGTC 60.097 37.037 0.00 0.00 0.00 3.67
4848 7933 7.908082 CGAAATTACAAAAAGTCAAGAGTGTCA 59.092 33.333 0.00 0.00 0.00 3.58
4849 7934 8.911247 AAATTACAAAAAGTCAAGAGTGTCAC 57.089 30.769 0.00 0.00 0.00 3.67
4850 7935 7.624360 ATTACAAAAAGTCAAGAGTGTCACA 57.376 32.000 5.62 0.00 0.00 3.58
4851 7936 7.624360 TTACAAAAAGTCAAGAGTGTCACAT 57.376 32.000 5.62 0.00 0.00 3.21
4852 7937 8.725405 TTACAAAAAGTCAAGAGTGTCACATA 57.275 30.769 5.62 0.00 0.00 2.29
4853 7938 7.624360 ACAAAAAGTCAAGAGTGTCACATAA 57.376 32.000 5.62 0.00 0.00 1.90
4854 7939 8.050778 ACAAAAAGTCAAGAGTGTCACATAAA 57.949 30.769 5.62 0.00 0.00 1.40
4855 7940 8.519526 ACAAAAAGTCAAGAGTGTCACATAAAA 58.480 29.630 5.62 0.00 0.00 1.52
4856 7941 9.352784 CAAAAAGTCAAGAGTGTCACATAAAAA 57.647 29.630 5.62 0.00 0.00 1.94
4884 7969 7.401060 TGGAAAATATACCCTACATCCATGT 57.599 36.000 0.00 0.00 44.48 3.21
4885 7970 7.230747 TGGAAAATATACCCTACATCCATGTG 58.769 38.462 2.26 0.00 41.89 3.21
4886 7971 7.147213 TGGAAAATATACCCTACATCCATGTGT 60.147 37.037 2.26 0.00 41.89 3.72
4887 7972 8.380099 GGAAAATATACCCTACATCCATGTGTA 58.620 37.037 2.26 0.00 41.89 2.90
4888 7973 9.216117 GAAAATATACCCTACATCCATGTGTAC 57.784 37.037 2.26 0.00 41.89 2.90
4889 7974 8.506196 AAATATACCCTACATCCATGTGTACT 57.494 34.615 2.26 0.00 41.89 2.73
4890 7975 7.719871 ATATACCCTACATCCATGTGTACTC 57.280 40.000 2.26 0.00 41.89 2.59
4891 7976 3.719871 ACCCTACATCCATGTGTACTCA 58.280 45.455 2.26 0.00 41.89 3.41
4892 7977 3.451178 ACCCTACATCCATGTGTACTCAC 59.549 47.826 0.00 0.00 41.89 3.51
4893 7978 3.181465 CCCTACATCCATGTGTACTCACC 60.181 52.174 0.00 0.00 43.26 4.02
4894 7979 3.181465 CCTACATCCATGTGTACTCACCC 60.181 52.174 0.00 0.00 43.26 4.61
4895 7980 2.551270 ACATCCATGTGTACTCACCCT 58.449 47.619 0.00 0.00 43.26 4.34
4896 7981 2.501723 ACATCCATGTGTACTCACCCTC 59.498 50.000 0.00 0.00 43.26 4.30
4897 7982 2.319025 TCCATGTGTACTCACCCTCA 57.681 50.000 0.00 0.00 43.26 3.86
4898 7983 1.899814 TCCATGTGTACTCACCCTCAC 59.100 52.381 0.00 0.00 43.26 3.51
4899 7984 1.623311 CCATGTGTACTCACCCTCACA 59.377 52.381 0.00 0.00 43.26 3.58
4900 7985 2.612972 CCATGTGTACTCACCCTCACAC 60.613 54.545 0.00 0.00 42.25 3.82
4901 7986 1.045407 TGTGTACTCACCCTCACACC 58.955 55.000 0.00 0.00 43.26 4.16
4902 7987 1.339097 GTGTACTCACCCTCACACCT 58.661 55.000 0.00 0.00 38.51 4.00
4903 7988 1.272769 GTGTACTCACCCTCACACCTC 59.727 57.143 0.00 0.00 38.51 3.85
4904 7989 1.147191 TGTACTCACCCTCACACCTCT 59.853 52.381 0.00 0.00 0.00 3.69
4905 7990 1.819903 GTACTCACCCTCACACCTCTC 59.180 57.143 0.00 0.00 0.00 3.20
4906 7991 0.485099 ACTCACCCTCACACCTCTCT 59.515 55.000 0.00 0.00 0.00 3.10
4907 7992 1.181786 CTCACCCTCACACCTCTCTC 58.818 60.000 0.00 0.00 0.00 3.20
4908 7993 0.780637 TCACCCTCACACCTCTCTCT 59.219 55.000 0.00 0.00 0.00 3.10
4909 7994 1.181786 CACCCTCACACCTCTCTCTC 58.818 60.000 0.00 0.00 0.00 3.20
4910 7995 1.080638 ACCCTCACACCTCTCTCTCT 58.919 55.000 0.00 0.00 0.00 3.10
4911 7996 1.005450 ACCCTCACACCTCTCTCTCTC 59.995 57.143 0.00 0.00 0.00 3.20
4912 7997 1.284785 CCCTCACACCTCTCTCTCTCT 59.715 57.143 0.00 0.00 0.00 3.10
4913 7998 2.643551 CCTCACACCTCTCTCTCTCTC 58.356 57.143 0.00 0.00 0.00 3.20
4914 7999 2.239654 CCTCACACCTCTCTCTCTCTCT 59.760 54.545 0.00 0.00 0.00 3.10
4915 8000 3.535561 CTCACACCTCTCTCTCTCTCTC 58.464 54.545 0.00 0.00 0.00 3.20
4916 8001 3.181329 TCACACCTCTCTCTCTCTCTCT 58.819 50.000 0.00 0.00 0.00 3.10
4917 8002 3.197766 TCACACCTCTCTCTCTCTCTCTC 59.802 52.174 0.00 0.00 0.00 3.20
4918 8003 2.505819 ACACCTCTCTCTCTCTCTCTCC 59.494 54.545 0.00 0.00 0.00 3.71
4919 8004 2.127708 ACCTCTCTCTCTCTCTCTCCC 58.872 57.143 0.00 0.00 0.00 4.30
4920 8005 2.293856 ACCTCTCTCTCTCTCTCTCCCT 60.294 54.545 0.00 0.00 0.00 4.20
4921 8006 2.370189 CCTCTCTCTCTCTCTCTCCCTC 59.630 59.091 0.00 0.00 0.00 4.30
4922 8007 3.041211 CTCTCTCTCTCTCTCTCCCTCA 58.959 54.545 0.00 0.00 0.00 3.86
4923 8008 2.771943 TCTCTCTCTCTCTCTCCCTCAC 59.228 54.545 0.00 0.00 0.00 3.51
4924 8009 2.505407 CTCTCTCTCTCTCTCCCTCACA 59.495 54.545 0.00 0.00 0.00 3.58
4925 8010 3.122480 TCTCTCTCTCTCTCCCTCACAT 58.878 50.000 0.00 0.00 0.00 3.21
4926 8011 3.117926 TCTCTCTCTCTCTCCCTCACATG 60.118 52.174 0.00 0.00 0.00 3.21
4927 8012 2.849318 TCTCTCTCTCTCCCTCACATGA 59.151 50.000 0.00 0.00 0.00 3.07
4928 8013 3.117926 TCTCTCTCTCTCCCTCACATGAG 60.118 52.174 0.00 1.63 41.71 2.90
4929 8014 2.849318 TCTCTCTCTCCCTCACATGAGA 59.151 50.000 10.55 0.00 44.74 3.27
4930 8015 3.462954 TCTCTCTCTCCCTCACATGAGAT 59.537 47.826 10.55 0.00 44.74 2.75
4931 8016 4.079269 TCTCTCTCTCCCTCACATGAGATT 60.079 45.833 10.55 0.00 44.74 2.40
4932 8017 4.214310 TCTCTCTCCCTCACATGAGATTC 58.786 47.826 10.55 0.00 44.74 2.52
4933 8018 4.079269 TCTCTCTCCCTCACATGAGATTCT 60.079 45.833 10.55 0.00 44.74 2.40
4934 8019 4.618635 TCTCTCCCTCACATGAGATTCTT 58.381 43.478 10.55 0.00 44.74 2.52
4935 8020 5.028802 TCTCTCCCTCACATGAGATTCTTT 58.971 41.667 10.55 0.00 44.74 2.52
4936 8021 5.128499 TCTCTCCCTCACATGAGATTCTTTC 59.872 44.000 10.55 0.00 44.74 2.62
4937 8022 5.028802 TCTCCCTCACATGAGATTCTTTCT 58.971 41.667 10.55 0.00 44.74 2.52
4938 8023 5.486775 TCTCCCTCACATGAGATTCTTTCTT 59.513 40.000 10.55 0.00 44.74 2.52
4939 8024 5.494724 TCCCTCACATGAGATTCTTTCTTG 58.505 41.667 10.55 0.00 44.74 3.02
4940 8025 5.013495 TCCCTCACATGAGATTCTTTCTTGT 59.987 40.000 10.55 0.00 44.74 3.16
4941 8026 5.709164 CCCTCACATGAGATTCTTTCTTGTT 59.291 40.000 10.55 0.00 44.74 2.83
4942 8027 6.128063 CCCTCACATGAGATTCTTTCTTGTTC 60.128 42.308 10.55 0.00 44.74 3.18
4943 8028 6.654161 CCTCACATGAGATTCTTTCTTGTTCT 59.346 38.462 10.55 0.00 44.74 3.01
4944 8029 7.361031 CCTCACATGAGATTCTTTCTTGTTCTG 60.361 40.741 10.55 0.00 44.74 3.02
4945 8030 7.219322 TCACATGAGATTCTTTCTTGTTCTGA 58.781 34.615 0.00 0.00 33.74 3.27
4946 8031 7.881751 TCACATGAGATTCTTTCTTGTTCTGAT 59.118 33.333 0.00 0.00 33.74 2.90
4947 8032 8.512956 CACATGAGATTCTTTCTTGTTCTGATT 58.487 33.333 0.00 0.00 33.74 2.57
4948 8033 9.075678 ACATGAGATTCTTTCTTGTTCTGATTT 57.924 29.630 0.00 0.00 33.74 2.17
4949 8034 9.909644 CATGAGATTCTTTCTTGTTCTGATTTT 57.090 29.630 0.00 0.00 33.74 1.82
4951 8036 9.740239 TGAGATTCTTTCTTGTTCTGATTTTTG 57.260 29.630 0.00 0.00 33.74 2.44
4952 8037 9.956720 GAGATTCTTTCTTGTTCTGATTTTTGA 57.043 29.630 0.00 0.00 33.74 2.69
4957 8042 8.819974 TCTTTCTTGTTCTGATTTTTGAAATGC 58.180 29.630 0.00 0.00 0.00 3.56
4958 8043 8.489990 TTTCTTGTTCTGATTTTTGAAATGCA 57.510 26.923 0.00 0.00 0.00 3.96
4959 8044 7.467557 TCTTGTTCTGATTTTTGAAATGCAC 57.532 32.000 0.00 0.00 0.00 4.57
4960 8045 7.040494 TCTTGTTCTGATTTTTGAAATGCACA 58.960 30.769 0.00 0.00 0.00 4.57
4961 8046 7.548427 TCTTGTTCTGATTTTTGAAATGCACAA 59.452 29.630 0.00 0.00 0.00 3.33
4962 8047 7.789273 TGTTCTGATTTTTGAAATGCACAAT 57.211 28.000 0.00 0.00 0.00 2.71
4963 8048 7.631822 TGTTCTGATTTTTGAAATGCACAATG 58.368 30.769 0.00 0.00 0.00 2.82
4964 8049 6.788684 TCTGATTTTTGAAATGCACAATGG 57.211 33.333 0.00 0.00 0.00 3.16
4965 8050 5.179742 TCTGATTTTTGAAATGCACAATGGC 59.820 36.000 0.00 0.00 0.00 4.40
4966 8051 5.064558 TGATTTTTGAAATGCACAATGGCT 58.935 33.333 0.00 0.00 34.04 4.75
4967 8052 6.228995 TGATTTTTGAAATGCACAATGGCTA 58.771 32.000 0.00 0.00 34.04 3.93
4968 8053 5.921004 TTTTTGAAATGCACAATGGCTAC 57.079 34.783 0.00 0.00 34.04 3.58
4969 8054 4.597404 TTTGAAATGCACAATGGCTACA 57.403 36.364 0.00 0.00 34.04 2.74
4970 8055 4.597404 TTGAAATGCACAATGGCTACAA 57.403 36.364 0.00 0.00 34.04 2.41
4971 8056 3.911868 TGAAATGCACAATGGCTACAAC 58.088 40.909 0.00 0.00 34.04 3.32
4972 8057 3.573538 TGAAATGCACAATGGCTACAACT 59.426 39.130 0.00 0.00 34.04 3.16
4973 8058 3.855689 AATGCACAATGGCTACAACTC 57.144 42.857 0.00 0.00 34.04 3.01
4974 8059 2.566833 TGCACAATGGCTACAACTCT 57.433 45.000 0.00 0.00 34.04 3.24
4975 8060 3.694043 TGCACAATGGCTACAACTCTA 57.306 42.857 0.00 0.00 34.04 2.43
4976 8061 4.014569 TGCACAATGGCTACAACTCTAA 57.985 40.909 0.00 0.00 34.04 2.10
4977 8062 4.393834 TGCACAATGGCTACAACTCTAAA 58.606 39.130 0.00 0.00 34.04 1.85
4978 8063 4.455533 TGCACAATGGCTACAACTCTAAAG 59.544 41.667 0.00 0.00 34.04 1.85
4979 8064 4.695455 GCACAATGGCTACAACTCTAAAGA 59.305 41.667 0.00 0.00 0.00 2.52
4980 8065 5.355350 GCACAATGGCTACAACTCTAAAGAT 59.645 40.000 0.00 0.00 0.00 2.40
4981 8066 6.538742 GCACAATGGCTACAACTCTAAAGATA 59.461 38.462 0.00 0.00 0.00 1.98
4982 8067 7.227512 GCACAATGGCTACAACTCTAAAGATAT 59.772 37.037 0.00 0.00 0.00 1.63
4983 8068 9.113838 CACAATGGCTACAACTCTAAAGATATT 57.886 33.333 0.00 0.00 0.00 1.28
4984 8069 9.686683 ACAATGGCTACAACTCTAAAGATATTT 57.313 29.630 0.00 0.00 0.00 1.40
4986 8071 9.905713 AATGGCTACAACTCTAAAGATATTTCA 57.094 29.630 0.00 0.00 0.00 2.69
5015 8100 5.453567 AAAGCACCTTCACTAAAACATCC 57.546 39.130 0.00 0.00 0.00 3.51
5016 8101 4.373156 AGCACCTTCACTAAAACATCCT 57.627 40.909 0.00 0.00 0.00 3.24
5017 8102 4.729868 AGCACCTTCACTAAAACATCCTT 58.270 39.130 0.00 0.00 0.00 3.36
5018 8103 4.520492 AGCACCTTCACTAAAACATCCTTG 59.480 41.667 0.00 0.00 0.00 3.61
5019 8104 4.278419 GCACCTTCACTAAAACATCCTTGT 59.722 41.667 0.00 0.00 37.82 3.16
5021 8106 6.438763 CACCTTCACTAAAACATCCTTGTTC 58.561 40.000 0.00 0.00 45.30 3.18
5022 8107 6.263168 CACCTTCACTAAAACATCCTTGTTCT 59.737 38.462 0.00 0.00 45.30 3.01
5023 8108 6.263168 ACCTTCACTAAAACATCCTTGTTCTG 59.737 38.462 0.00 0.00 45.30 3.02
5024 8109 6.263168 CCTTCACTAAAACATCCTTGTTCTGT 59.737 38.462 0.00 0.00 45.30 3.41
5025 8110 6.618287 TCACTAAAACATCCTTGTTCTGTG 57.382 37.500 10.07 10.07 45.30 3.66
5026 8111 5.008613 TCACTAAAACATCCTTGTTCTGTGC 59.991 40.000 10.88 0.00 45.30 4.57
5027 8112 3.733443 AAAACATCCTTGTTCTGTGCC 57.267 42.857 0.00 0.00 45.30 5.01
5028 8113 2.664402 AACATCCTTGTTCTGTGCCT 57.336 45.000 0.00 0.00 42.43 4.75
5029 8114 2.664402 ACATCCTTGTTCTGTGCCTT 57.336 45.000 0.00 0.00 29.55 4.35
5030 8115 2.508526 ACATCCTTGTTCTGTGCCTTC 58.491 47.619 0.00 0.00 29.55 3.46
5031 8116 2.107204 ACATCCTTGTTCTGTGCCTTCT 59.893 45.455 0.00 0.00 29.55 2.85
5032 8117 2.260844 TCCTTGTTCTGTGCCTTCTG 57.739 50.000 0.00 0.00 0.00 3.02
5033 8118 1.768275 TCCTTGTTCTGTGCCTTCTGA 59.232 47.619 0.00 0.00 0.00 3.27
5034 8119 2.172505 TCCTTGTTCTGTGCCTTCTGAA 59.827 45.455 0.00 0.00 0.00 3.02
5035 8120 2.951642 CCTTGTTCTGTGCCTTCTGAAA 59.048 45.455 0.00 0.00 0.00 2.69
5036 8121 3.571401 CCTTGTTCTGTGCCTTCTGAAAT 59.429 43.478 0.00 0.00 0.00 2.17
5037 8122 4.761739 CCTTGTTCTGTGCCTTCTGAAATA 59.238 41.667 0.00 0.00 0.00 1.40
5038 8123 5.416952 CCTTGTTCTGTGCCTTCTGAAATAT 59.583 40.000 0.00 0.00 0.00 1.28
5039 8124 6.599244 CCTTGTTCTGTGCCTTCTGAAATATA 59.401 38.462 0.00 0.00 0.00 0.86
5040 8125 7.284034 CCTTGTTCTGTGCCTTCTGAAATATAT 59.716 37.037 0.00 0.00 0.00 0.86
5041 8126 9.330063 CTTGTTCTGTGCCTTCTGAAATATATA 57.670 33.333 0.00 0.00 0.00 0.86
5042 8127 9.679661 TTGTTCTGTGCCTTCTGAAATATATAA 57.320 29.630 0.00 0.00 0.00 0.98
5043 8128 9.851686 TGTTCTGTGCCTTCTGAAATATATAAT 57.148 29.630 0.00 0.00 0.00 1.28
5046 8131 9.494271 TCTGTGCCTTCTGAAATATATAATGAC 57.506 33.333 0.00 0.00 0.00 3.06
5047 8132 9.499479 CTGTGCCTTCTGAAATATATAATGACT 57.501 33.333 0.00 0.00 0.00 3.41
5066 8151 8.526667 AATGACTACAGCTCTAAAGAGTATGA 57.473 34.615 16.39 4.87 43.85 2.15
5067 8152 7.561021 TGACTACAGCTCTAAAGAGTATGAG 57.439 40.000 16.39 12.49 43.85 2.90
5077 8162 8.183830 CTCTAAAGAGTATGAGCAAACAGAAG 57.816 38.462 0.00 0.00 37.40 2.85
5078 8163 7.671302 TCTAAAGAGTATGAGCAAACAGAAGT 58.329 34.615 0.00 0.00 0.00 3.01
5079 8164 8.150945 TCTAAAGAGTATGAGCAAACAGAAGTT 58.849 33.333 0.00 0.00 40.40 2.66
5080 8165 6.551385 AAGAGTATGAGCAAACAGAAGTTG 57.449 37.500 0.00 0.00 38.17 3.16
5081 8166 5.858381 AGAGTATGAGCAAACAGAAGTTGA 58.142 37.500 0.00 0.00 38.17 3.18
5082 8167 6.291377 AGAGTATGAGCAAACAGAAGTTGAA 58.709 36.000 0.00 0.00 38.17 2.69
5083 8168 6.426328 AGAGTATGAGCAAACAGAAGTTGAAG 59.574 38.462 0.00 0.00 38.17 3.02
5084 8169 6.058183 AGTATGAGCAAACAGAAGTTGAAGT 58.942 36.000 0.00 0.00 38.17 3.01
5085 8170 4.621068 TGAGCAAACAGAAGTTGAAGTG 57.379 40.909 0.00 0.00 38.17 3.16
5110 8195 0.672401 GCCCTGCGTAACAACAGCTA 60.672 55.000 0.00 0.00 32.37 3.32
5111 8196 1.803334 CCCTGCGTAACAACAGCTAA 58.197 50.000 0.00 0.00 32.37 3.09
5156 8241 3.069872 CCATCATCTCAGTCCTCTTCAGG 59.930 52.174 0.00 0.00 42.01 3.86
5172 8257 3.175438 TCAGGTTCCTCAGTCATCTCA 57.825 47.619 0.00 0.00 0.00 3.27
5185 8270 3.259374 AGTCATCTCACAGTCATTTCCGT 59.741 43.478 0.00 0.00 0.00 4.69
5198 8283 5.011738 AGTCATTTCCGTCCTCTTCAAGTTA 59.988 40.000 0.00 0.00 0.00 2.24
5220 8305 2.892852 CTCCATCTCAGAGTCATCTCCC 59.107 54.545 0.00 0.00 41.26 4.30
5232 8317 3.573538 AGTCATCTCCCTCATCAGATTCG 59.426 47.826 0.00 0.00 0.00 3.34
5243 8328 2.672961 TCAGATTCGTCCATGGTCAC 57.327 50.000 12.58 2.13 0.00 3.67
5247 8332 2.768527 AGATTCGTCCATGGTCACAGAT 59.231 45.455 12.58 0.24 0.00 2.90
5300 8385 3.881688 CCTGGACAAGCATAATTCTCCAG 59.118 47.826 4.76 4.76 42.11 3.86
5316 8401 6.916360 TTCTCCAGAATTTAGGTTTGCAAT 57.084 33.333 0.00 0.00 0.00 3.56
5318 8403 8.415950 TTCTCCAGAATTTAGGTTTGCAATAA 57.584 30.769 0.00 0.00 0.00 1.40
5352 8437 3.629398 CACTTCCTTTAGCCCAGCAATAG 59.371 47.826 0.00 0.00 0.00 1.73
5359 8444 2.754012 AGCCCAGCAATAGCCAATAA 57.246 45.000 0.00 0.00 43.56 1.40
5435 8520 3.119173 ACATACCCATGCCAAACAATTCG 60.119 43.478 0.00 0.00 35.39 3.34
5440 8525 1.271934 CATGCCAAACAATTCGGGACA 59.728 47.619 0.00 0.00 0.00 4.02
5479 8564 5.769662 AGCACATTCATTAGGTTCTGAAACA 59.230 36.000 8.34 0.00 37.10 2.83
5481 8566 6.583806 GCACATTCATTAGGTTCTGAAACAAG 59.416 38.462 8.34 0.00 37.10 3.16
5483 8568 5.705609 TTCATTAGGTTCTGAAACAAGGC 57.294 39.130 8.34 0.00 37.10 4.35
5484 8569 4.724399 TCATTAGGTTCTGAAACAAGGCA 58.276 39.130 8.34 0.00 37.10 4.75
5485 8570 4.518970 TCATTAGGTTCTGAAACAAGGCAC 59.481 41.667 8.34 0.00 37.10 5.01
5486 8571 2.736670 AGGTTCTGAAACAAGGCACT 57.263 45.000 8.34 0.00 37.10 4.40
5487 8572 2.576615 AGGTTCTGAAACAAGGCACTC 58.423 47.619 8.34 0.00 37.10 3.51
5488 8573 1.264288 GGTTCTGAAACAAGGCACTCG 59.736 52.381 0.00 0.00 37.10 4.18
5489 8574 1.940613 GTTCTGAAACAAGGCACTCGT 59.059 47.619 0.00 0.00 38.49 4.18
5490 8575 3.128349 GTTCTGAAACAAGGCACTCGTA 58.872 45.455 0.00 0.00 38.49 3.43
5492 8577 4.002906 TCTGAAACAAGGCACTCGTAAT 57.997 40.909 0.00 0.00 38.49 1.89
5493 8578 3.745975 TCTGAAACAAGGCACTCGTAATG 59.254 43.478 0.00 0.00 38.49 1.90
5575 8661 1.901833 TCACCTGCTCATGACAGCTAA 59.098 47.619 15.68 4.68 40.39 3.09
5605 8691 2.474410 AGAAAACCATCCACCGAGTC 57.526 50.000 0.00 0.00 0.00 3.36
5636 8722 0.407918 GGAAATGAACCCCAGGGACA 59.592 55.000 7.25 9.60 38.96 4.02
5644 8730 0.178861 ACCCCAGGGACATGAGACTT 60.179 55.000 7.25 0.00 38.96 3.01
5645 8731 0.254178 CCCCAGGGACATGAGACTTG 59.746 60.000 7.25 0.00 37.50 3.16
5650 8736 2.564504 CAGGGACATGAGACTTGTCAGA 59.435 50.000 15.72 0.00 44.22 3.27
5674 8760 6.993079 ACCCTTCGAATTAAGCAAAGAAAAT 58.007 32.000 0.00 0.00 0.00 1.82
5675 8761 8.117813 ACCCTTCGAATTAAGCAAAGAAAATA 57.882 30.769 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.787435 TCACCTACTTATTTTTGTGTTATGTCT 57.213 29.630 0.00 0.00 0.00 3.41
7 8 9.821662 GTCACCTACTTATTTTTGTGTTATGTC 57.178 33.333 0.00 0.00 0.00 3.06
15 18 6.546034 AGTGCTTGTCACCTACTTATTTTTGT 59.454 34.615 0.00 0.00 46.81 2.83
26 29 6.597672 CCACATAATTAAGTGCTTGTCACCTA 59.402 38.462 14.02 0.00 46.81 3.08
27 30 5.415701 CCACATAATTAAGTGCTTGTCACCT 59.584 40.000 14.02 0.00 46.81 4.00
109 112 9.661563 TCTGAACTTTCGTATGTTGGTTTATAT 57.338 29.630 0.00 0.00 0.00 0.86
110 113 9.491675 TTCTGAACTTTCGTATGTTGGTTTATA 57.508 29.630 0.00 0.00 0.00 0.98
111 114 7.972832 TCTGAACTTTCGTATGTTGGTTTAT 57.027 32.000 0.00 0.00 0.00 1.40
112 115 7.789273 TTCTGAACTTTCGTATGTTGGTTTA 57.211 32.000 0.00 0.00 0.00 2.01
113 116 6.687081 TTCTGAACTTTCGTATGTTGGTTT 57.313 33.333 0.00 0.00 0.00 3.27
114 117 6.710744 AGATTCTGAACTTTCGTATGTTGGTT 59.289 34.615 0.00 0.00 0.00 3.67
115 118 6.231211 AGATTCTGAACTTTCGTATGTTGGT 58.769 36.000 0.00 0.00 0.00 3.67
133 136 3.526931 TTCGGCTTCATTCGAGATTCT 57.473 42.857 0.00 0.00 36.72 2.40
172 175 2.277692 TAGACGTTGGATCGCGCG 60.278 61.111 26.76 26.76 0.00 6.86
217 222 4.790878 CTGAATATTTCGTCCGACGGATA 58.209 43.478 21.53 17.44 42.81 2.59
250 255 0.104487 CTGGTCGCTGATCTCATGCT 59.896 55.000 0.00 0.00 0.00 3.79
253 258 3.616956 TTTTCTGGTCGCTGATCTCAT 57.383 42.857 0.00 0.00 0.00 2.90
254 259 3.616956 ATTTTCTGGTCGCTGATCTCA 57.383 42.857 0.00 0.00 0.00 3.27
333 338 1.134175 CATGGTGAATGTTTACCGGCC 59.866 52.381 0.00 0.00 39.87 6.13
371 376 4.327898 GTGCATGGTGAATGTTTGCTAATG 59.672 41.667 0.00 0.00 38.65 1.90
377 382 1.343789 TGGGTGCATGGTGAATGTTTG 59.656 47.619 0.00 0.00 38.65 2.93
453 458 2.949644 GTGGACAAATATTTCTCGGGGG 59.050 50.000 0.00 0.00 0.00 5.40
639 644 1.175983 CCGGCTGTTGGTTTTGGCTA 61.176 55.000 0.00 0.00 0.00 3.93
743 748 2.358267 ACTACGTAGTGCAGCAGTATCC 59.642 50.000 26.87 0.82 45.73 2.59
854 862 4.970860 AGAGAGAGAGAGAGAGATGGAG 57.029 50.000 0.00 0.00 0.00 3.86
888 913 7.345914 AGGTCTAGAGCTACTCAAAATAATGGT 59.654 37.037 22.67 0.00 37.39 3.55
889 914 7.731054 AGGTCTAGAGCTACTCAAAATAATGG 58.269 38.462 22.67 0.00 37.39 3.16
910 935 9.490663 CATTTTCACTGATTACGAAATAAGGTC 57.509 33.333 0.00 0.00 28.65 3.85
916 941 8.567948 ACTTGTCATTTTCACTGATTACGAAAT 58.432 29.630 0.00 0.00 0.00 2.17
984 1014 8.816144 CCTATTTATAGATCGTAGTCTCCGTAC 58.184 40.741 0.00 0.00 32.05 3.67
989 1019 9.616156 TGGATCCTATTTATAGATCGTAGTCTC 57.384 37.037 14.23 0.00 32.05 3.36
990 1020 9.621629 CTGGATCCTATTTATAGATCGTAGTCT 57.378 37.037 14.23 0.00 32.05 3.24
1021 1053 3.392947 AGGATCTGATGTCGGAGAGAGTA 59.607 47.826 0.00 0.00 36.95 2.59
1063 1095 0.250467 ACTGTGCAACTCTGGCGAAT 60.250 50.000 0.00 0.00 38.04 3.34
1066 1098 1.195448 CTAAACTGTGCAACTCTGGCG 59.805 52.381 0.00 0.00 38.04 5.69
1135 1167 2.045340 AATGGAAGGAACGGCCCG 60.045 61.111 0.00 0.00 37.37 6.13
1143 1175 0.323302 TGCGCTACACAATGGAAGGA 59.677 50.000 9.73 0.00 0.00 3.36
1144 1176 1.164411 TTGCGCTACACAATGGAAGG 58.836 50.000 9.73 0.00 0.00 3.46
1145 1177 3.546815 GCTATTGCGCTACACAATGGAAG 60.547 47.826 9.73 0.00 38.00 3.46
1146 1178 2.354510 GCTATTGCGCTACACAATGGAA 59.645 45.455 9.73 0.00 38.00 3.53
1147 1179 1.939934 GCTATTGCGCTACACAATGGA 59.060 47.619 9.73 0.00 38.00 3.41
1203 1235 0.108615 CACCGCCTACCAGAGACTTG 60.109 60.000 0.00 0.00 0.00 3.16
1363 1395 2.656069 CCGTCCCATTGGAGTCGGT 61.656 63.158 18.22 0.00 42.49 4.69
1476 1550 2.360726 AAATCACGAACCCCGGCC 60.361 61.111 0.00 0.00 43.93 6.13
1497 1571 5.521735 CCAAGTTTTGAGGATGAGATCGTAG 59.478 44.000 0.00 0.00 0.00 3.51
1672 2226 7.421599 CGACCCAACAATGTATGCAAATATAA 58.578 34.615 0.00 0.00 0.00 0.98
1684 2238 1.152860 TGCACCGACCCAACAATGT 60.153 52.632 0.00 0.00 0.00 2.71
1862 2562 0.546747 AAGACCTCGATGTCCCCCAA 60.547 55.000 16.07 0.00 35.83 4.12
1915 2624 0.247460 CGATCCAGGAGTTGCAGTGA 59.753 55.000 0.00 0.00 0.00 3.41
2021 2730 3.662247 AGACGTTTTGACACTAGAGGG 57.338 47.619 0.00 0.00 0.00 4.30
2055 2764 4.347000 GCACCCTATTTATGTACTCCCTCA 59.653 45.833 0.00 0.00 0.00 3.86
2072 2781 7.669722 TCTTCAACTCAAAAATATAAGCACCCT 59.330 33.333 0.00 0.00 0.00 4.34
2073 2782 7.755373 GTCTTCAACTCAAAAATATAAGCACCC 59.245 37.037 0.00 0.00 0.00 4.61
2083 2792 9.480053 CAATAATGGTGTCTTCAACTCAAAAAT 57.520 29.630 0.00 0.00 31.63 1.82
2097 2806 7.054124 TCAGTAAAGGGATCAATAATGGTGTC 58.946 38.462 0.00 0.00 0.00 3.67
2127 2895 3.561310 GCACCACACACATATAGACATGG 59.439 47.826 0.00 0.00 0.00 3.66
2133 2901 1.594397 CGCTGCACCACACACATATAG 59.406 52.381 0.00 0.00 0.00 1.31
2238 3006 1.954146 GTCGTGTTCCTTGCGCTCA 60.954 57.895 9.73 0.00 0.00 4.26
2298 3066 0.464870 TGGGGTTCTTTTCGTCGTCA 59.535 50.000 0.00 0.00 0.00 4.35
2406 3271 1.515020 CTTGTGGCTCCTCTCCTCG 59.485 63.158 0.00 0.00 0.00 4.63
2649 3532 1.002430 AGCTCCGTCTCAAGCAAATCA 59.998 47.619 0.00 0.00 41.06 2.57
2733 3616 0.936764 CATGAATCTCGGGCGTCTCG 60.937 60.000 0.00 0.00 0.00 4.04
2792 3675 0.105224 TGCAAGCAAGCAAGCATGTT 59.895 45.000 7.23 0.00 42.46 2.71
2793 3676 1.743391 TGCAAGCAAGCAAGCATGT 59.257 47.368 7.23 0.00 42.46 3.21
2794 3677 4.665431 TGCAAGCAAGCAAGCATG 57.335 50.000 7.23 2.48 42.46 4.06
2811 3701 4.202223 ACAGGCAAACTATCGATCCGTTAT 60.202 41.667 0.00 0.00 0.00 1.89
2815 3705 1.860950 CACAGGCAAACTATCGATCCG 59.139 52.381 0.00 0.00 0.00 4.18
2830 3720 3.553508 GCATGCTAATTATTGGCCACAGG 60.554 47.826 3.88 0.00 36.15 4.00
2831 3721 3.068448 TGCATGCTAATTATTGGCCACAG 59.932 43.478 20.33 0.00 36.15 3.66
2833 3723 3.731652 TGCATGCTAATTATTGGCCAC 57.268 42.857 20.33 0.00 36.15 5.01
2834 3724 4.260139 CATGCATGCTAATTATTGGCCA 57.740 40.909 20.33 0.00 36.15 5.36
2856 3817 1.180029 CTTGTCCCCTGCATTTCCAG 58.820 55.000 0.00 0.00 0.00 3.86
2908 3873 1.434696 CATCCCTGCGATGGTTTGC 59.565 57.895 0.00 0.00 44.14 3.68
3005 3981 3.177228 AGGAGTAGTGACCAGCTTTCAT 58.823 45.455 0.00 0.00 0.00 2.57
3007 3983 3.686916 AAGGAGTAGTGACCAGCTTTC 57.313 47.619 0.00 0.00 0.00 2.62
3014 4846 4.969484 TGAAGGAAAAAGGAGTAGTGACC 58.031 43.478 0.00 0.00 0.00 4.02
3016 4848 7.230712 GGAAAATGAAGGAAAAAGGAGTAGTGA 59.769 37.037 0.00 0.00 0.00 3.41
3021 4853 5.305386 CCTGGAAAATGAAGGAAAAAGGAGT 59.695 40.000 0.00 0.00 32.43 3.85
3023 4855 5.463154 TCCTGGAAAATGAAGGAAAAAGGA 58.537 37.500 0.00 0.00 37.16 3.36
3043 4879 7.177392 ACAATCGATGAAGAATTTTCCTTTCCT 59.823 33.333 0.00 0.00 0.00 3.36
3146 5814 2.833582 GATCAGGGAGTCCGCCGA 60.834 66.667 2.26 0.00 38.33 5.54
3217 5892 5.499004 TGAACAACTCCTTATTAGCCACT 57.501 39.130 0.00 0.00 0.00 4.00
3226 6162 5.304686 AGTCCAACATGAACAACTCCTTA 57.695 39.130 0.00 0.00 0.00 2.69
3230 6166 4.385825 TGGTAGTCCAACATGAACAACTC 58.614 43.478 0.00 0.00 41.25 3.01
3316 6252 1.213013 GAGGAAGAAGAGTGCGCGA 59.787 57.895 12.10 0.00 0.00 5.87
3322 6258 0.882474 CGTCGGTGAGGAAGAAGAGT 59.118 55.000 0.00 0.00 0.00 3.24
3433 6405 4.451150 GATCCCGTGACGCTGCCA 62.451 66.667 0.00 0.00 0.00 4.92
3994 7059 1.830587 ATGGCTCGTCCTGCTTGTCA 61.831 55.000 0.00 0.00 35.26 3.58
4204 7278 2.284258 ACCTTCTCTGGCGCCTCT 60.284 61.111 29.70 0.00 0.00 3.69
4243 7317 3.024547 GACTATGGCACTCTGGTACTGA 58.975 50.000 0.00 0.00 34.45 3.41
4270 7344 1.550976 GTCGACAGGAGGTCCAAGATT 59.449 52.381 11.55 0.00 43.95 2.40
4321 7395 0.904649 TCCATGATGGCTCTTCGTGT 59.095 50.000 6.59 0.00 37.47 4.49
4333 7407 1.412074 GCCCCATCCTGTTTCCATGAT 60.412 52.381 0.00 0.00 0.00 2.45
4673 7758 3.619483 CGACCATGGCACTACGAAAAATA 59.381 43.478 13.04 0.00 0.00 1.40
4676 7761 1.434555 CGACCATGGCACTACGAAAA 58.565 50.000 13.04 0.00 0.00 2.29
4677 7762 0.390603 CCGACCATGGCACTACGAAA 60.391 55.000 13.04 0.00 0.00 3.46
4678 7763 1.216977 CCGACCATGGCACTACGAA 59.783 57.895 13.04 0.00 0.00 3.85
4679 7764 2.889617 CCGACCATGGCACTACGA 59.110 61.111 13.04 0.00 0.00 3.43
4689 7774 1.956477 GCCTTAATTCATGCCGACCAT 59.044 47.619 0.00 0.00 33.39 3.55
4690 7775 1.340502 TGCCTTAATTCATGCCGACCA 60.341 47.619 0.00 0.00 0.00 4.02
4691 7776 1.388547 TGCCTTAATTCATGCCGACC 58.611 50.000 0.00 0.00 0.00 4.79
4692 7777 3.066621 TGAATGCCTTAATTCATGCCGAC 59.933 43.478 0.00 0.00 40.72 4.79
4693 7778 3.286353 TGAATGCCTTAATTCATGCCGA 58.714 40.909 0.00 0.00 40.72 5.54
4694 7779 3.713858 TGAATGCCTTAATTCATGCCG 57.286 42.857 0.00 0.00 40.72 5.69
4700 7785 9.807649 ATGTTGAAACTATGAATGCCTTAATTC 57.192 29.630 0.00 0.00 37.13 2.17
4703 7788 9.679661 TCTATGTTGAAACTATGAATGCCTTAA 57.320 29.630 0.00 0.00 0.00 1.85
4704 7789 9.679661 TTCTATGTTGAAACTATGAATGCCTTA 57.320 29.630 0.00 0.00 0.00 2.69
4705 7790 8.579850 TTCTATGTTGAAACTATGAATGCCTT 57.420 30.769 0.00 0.00 0.00 4.35
4706 7791 8.757982 ATTCTATGTTGAAACTATGAATGCCT 57.242 30.769 0.00 0.00 0.00 4.75
4714 7799 9.988350 CGCAAGTTAATTCTATGTTGAAACTAT 57.012 29.630 0.00 0.00 0.00 2.12
4715 7800 8.447833 CCGCAAGTTAATTCTATGTTGAAACTA 58.552 33.333 0.00 0.00 0.00 2.24
4716 7801 7.174253 TCCGCAAGTTAATTCTATGTTGAAACT 59.826 33.333 0.00 0.00 0.00 2.66
4717 7802 7.302524 TCCGCAAGTTAATTCTATGTTGAAAC 58.697 34.615 0.00 0.00 0.00 2.78
4718 7803 7.389330 TCTCCGCAAGTTAATTCTATGTTGAAA 59.611 33.333 0.00 0.00 0.00 2.69
4719 7804 6.876789 TCTCCGCAAGTTAATTCTATGTTGAA 59.123 34.615 0.00 0.00 0.00 2.69
4720 7805 6.403049 TCTCCGCAAGTTAATTCTATGTTGA 58.597 36.000 0.00 0.00 0.00 3.18
4721 7806 6.662414 TCTCCGCAAGTTAATTCTATGTTG 57.338 37.500 0.00 0.00 0.00 3.33
4753 7838 4.531339 TCAAGGAAATGATTTGGATGCCAA 59.469 37.500 0.00 0.00 42.29 4.52
4754 7839 4.095211 TCAAGGAAATGATTTGGATGCCA 58.905 39.130 0.00 0.00 0.00 4.92
4755 7840 4.741321 TCAAGGAAATGATTTGGATGCC 57.259 40.909 0.00 0.00 0.00 4.40
4756 7841 5.909477 TGATCAAGGAAATGATTTGGATGC 58.091 37.500 0.00 0.00 40.08 3.91
4757 7842 8.780846 TTTTGATCAAGGAAATGATTTGGATG 57.219 30.769 8.41 0.00 40.08 3.51
4758 7843 9.391006 CATTTTGATCAAGGAAATGATTTGGAT 57.609 29.630 19.83 0.00 41.14 3.41
4759 7844 8.377034 ACATTTTGATCAAGGAAATGATTTGGA 58.623 29.630 26.77 1.46 41.14 3.53
4760 7845 8.556213 ACATTTTGATCAAGGAAATGATTTGG 57.444 30.769 26.77 9.20 41.14 3.28
4762 7847 9.223099 GGAACATTTTGATCAAGGAAATGATTT 57.777 29.630 26.77 16.79 41.14 2.17
4763 7848 7.825761 GGGAACATTTTGATCAAGGAAATGATT 59.174 33.333 26.77 19.46 41.14 2.57
4764 7849 7.038160 TGGGAACATTTTGATCAAGGAAATGAT 60.038 33.333 26.77 19.59 41.14 2.45
4765 7850 6.269538 TGGGAACATTTTGATCAAGGAAATGA 59.730 34.615 26.77 10.24 41.14 2.57
4766 7851 6.465948 TGGGAACATTTTGATCAAGGAAATG 58.534 36.000 21.66 21.66 43.13 2.32
4767 7852 6.684897 TGGGAACATTTTGATCAAGGAAAT 57.315 33.333 8.41 3.22 33.40 2.17
4768 7853 6.126940 TGTTGGGAACATTTTGATCAAGGAAA 60.127 34.615 8.41 0.68 42.32 3.13
4769 7854 5.365025 TGTTGGGAACATTTTGATCAAGGAA 59.635 36.000 8.41 1.45 42.32 3.36
4770 7855 4.898265 TGTTGGGAACATTTTGATCAAGGA 59.102 37.500 8.41 2.20 42.32 3.36
4771 7856 5.212532 TGTTGGGAACATTTTGATCAAGG 57.787 39.130 8.41 5.38 42.32 3.61
4783 7868 5.221945 TGTTGGTAGACATATGTTGGGAACA 60.222 40.000 10.30 12.18 46.94 3.18
4784 7869 5.250200 TGTTGGTAGACATATGTTGGGAAC 58.750 41.667 10.30 9.99 0.00 3.62
4785 7870 5.506730 TGTTGGTAGACATATGTTGGGAA 57.493 39.130 10.30 0.00 0.00 3.97
4786 7871 5.428457 AGATGTTGGTAGACATATGTTGGGA 59.572 40.000 10.30 0.00 40.21 4.37
4787 7872 5.684704 AGATGTTGGTAGACATATGTTGGG 58.315 41.667 10.30 0.00 40.21 4.12
4788 7873 7.630242 AAAGATGTTGGTAGACATATGTTGG 57.370 36.000 10.30 0.00 40.21 3.77
4789 7874 8.950210 AGAAAAGATGTTGGTAGACATATGTTG 58.050 33.333 10.30 0.00 40.21 3.33
4794 7879 9.653287 CAGTTAGAAAAGATGTTGGTAGACATA 57.347 33.333 0.00 0.00 40.21 2.29
4795 7880 7.607991 CCAGTTAGAAAAGATGTTGGTAGACAT 59.392 37.037 0.00 0.00 42.68 3.06
4796 7881 6.934645 CCAGTTAGAAAAGATGTTGGTAGACA 59.065 38.462 0.00 0.00 0.00 3.41
4797 7882 6.128254 GCCAGTTAGAAAAGATGTTGGTAGAC 60.128 42.308 0.00 0.00 0.00 2.59
4798 7883 5.938125 GCCAGTTAGAAAAGATGTTGGTAGA 59.062 40.000 0.00 0.00 0.00 2.59
4799 7884 5.163854 CGCCAGTTAGAAAAGATGTTGGTAG 60.164 44.000 0.00 0.00 0.00 3.18
4800 7885 4.693566 CGCCAGTTAGAAAAGATGTTGGTA 59.306 41.667 0.00 0.00 0.00 3.25
4801 7886 3.502211 CGCCAGTTAGAAAAGATGTTGGT 59.498 43.478 0.00 0.00 0.00 3.67
4802 7887 3.751175 TCGCCAGTTAGAAAAGATGTTGG 59.249 43.478 0.00 0.00 0.00 3.77
4803 7888 5.356882 TTCGCCAGTTAGAAAAGATGTTG 57.643 39.130 0.00 0.00 0.00 3.33
4804 7889 6.575162 ATTTCGCCAGTTAGAAAAGATGTT 57.425 33.333 0.00 0.00 39.42 2.71
4805 7890 6.575162 AATTTCGCCAGTTAGAAAAGATGT 57.425 33.333 0.00 0.00 39.42 3.06
4806 7891 7.526608 TGTAATTTCGCCAGTTAGAAAAGATG 58.473 34.615 0.00 0.00 39.42 2.90
4807 7892 7.681939 TGTAATTTCGCCAGTTAGAAAAGAT 57.318 32.000 0.00 0.00 39.42 2.40
4808 7893 7.499321 TTGTAATTTCGCCAGTTAGAAAAGA 57.501 32.000 0.00 0.00 39.42 2.52
4809 7894 8.568732 TTTTGTAATTTCGCCAGTTAGAAAAG 57.431 30.769 0.00 0.00 39.42 2.27
4810 7895 8.928270 TTTTTGTAATTTCGCCAGTTAGAAAA 57.072 26.923 0.00 0.00 39.42 2.29
4811 7896 8.192110 ACTTTTTGTAATTTCGCCAGTTAGAAA 58.808 29.630 0.00 0.00 40.14 2.52
4812 7897 7.708998 ACTTTTTGTAATTTCGCCAGTTAGAA 58.291 30.769 0.00 0.00 0.00 2.10
4813 7898 7.012515 TGACTTTTTGTAATTTCGCCAGTTAGA 59.987 33.333 0.00 0.00 0.00 2.10
4814 7899 7.136119 TGACTTTTTGTAATTTCGCCAGTTAG 58.864 34.615 0.00 0.00 0.00 2.34
4815 7900 7.028926 TGACTTTTTGTAATTTCGCCAGTTA 57.971 32.000 0.00 0.00 0.00 2.24
4816 7901 5.897050 TGACTTTTTGTAATTTCGCCAGTT 58.103 33.333 0.00 0.00 0.00 3.16
4817 7902 5.508200 TGACTTTTTGTAATTTCGCCAGT 57.492 34.783 0.00 0.00 0.00 4.00
4818 7903 6.205784 TCTTGACTTTTTGTAATTTCGCCAG 58.794 36.000 0.00 0.00 0.00 4.85
4819 7904 6.137794 TCTTGACTTTTTGTAATTTCGCCA 57.862 33.333 0.00 0.00 0.00 5.69
4820 7905 6.142320 CACTCTTGACTTTTTGTAATTTCGCC 59.858 38.462 0.00 0.00 0.00 5.54
4821 7906 6.691388 ACACTCTTGACTTTTTGTAATTTCGC 59.309 34.615 0.00 0.00 0.00 4.70
4822 7907 7.908082 TGACACTCTTGACTTTTTGTAATTTCG 59.092 33.333 0.00 0.00 0.00 3.46
4823 7908 9.010366 GTGACACTCTTGACTTTTTGTAATTTC 57.990 33.333 0.00 0.00 0.00 2.17
4824 7909 8.519526 TGTGACACTCTTGACTTTTTGTAATTT 58.480 29.630 7.20 0.00 0.00 1.82
4825 7910 8.050778 TGTGACACTCTTGACTTTTTGTAATT 57.949 30.769 7.20 0.00 0.00 1.40
4826 7911 7.624360 TGTGACACTCTTGACTTTTTGTAAT 57.376 32.000 7.20 0.00 0.00 1.89
4827 7912 7.624360 ATGTGACACTCTTGACTTTTTGTAA 57.376 32.000 7.20 0.00 0.00 2.41
4828 7913 8.725405 TTATGTGACACTCTTGACTTTTTGTA 57.275 30.769 7.20 0.00 0.00 2.41
4829 7914 7.624360 TTATGTGACACTCTTGACTTTTTGT 57.376 32.000 7.20 0.00 0.00 2.83
4830 7915 8.909708 TTTTATGTGACACTCTTGACTTTTTG 57.090 30.769 7.20 0.00 0.00 2.44
4858 7943 9.122954 ACATGGATGTAGGGTATATTTTCCATA 57.877 33.333 0.00 0.00 39.96 2.74
4859 7944 7.890127 CACATGGATGTAGGGTATATTTTCCAT 59.110 37.037 0.00 0.00 42.05 3.41
4860 7945 7.147213 ACACATGGATGTAGGGTATATTTTCCA 60.147 37.037 0.00 0.00 39.39 3.53
4861 7946 7.231467 ACACATGGATGTAGGGTATATTTTCC 58.769 38.462 0.00 0.00 39.39 3.13
4862 7947 9.216117 GTACACATGGATGTAGGGTATATTTTC 57.784 37.037 0.00 0.00 39.39 2.29
4863 7948 8.945193 AGTACACATGGATGTAGGGTATATTTT 58.055 33.333 0.00 0.00 39.39 1.82
4864 7949 8.506196 AGTACACATGGATGTAGGGTATATTT 57.494 34.615 0.00 0.00 39.39 1.40
4865 7950 7.733047 TGAGTACACATGGATGTAGGGTATATT 59.267 37.037 0.00 0.00 39.39 1.28
4866 7951 7.178628 GTGAGTACACATGGATGTAGGGTATAT 59.821 40.741 0.00 0.00 45.32 0.86
4867 7952 6.492429 GTGAGTACACATGGATGTAGGGTATA 59.508 42.308 0.00 0.00 45.32 1.47
4868 7953 5.304614 GTGAGTACACATGGATGTAGGGTAT 59.695 44.000 0.00 0.00 45.32 2.73
4869 7954 4.647853 GTGAGTACACATGGATGTAGGGTA 59.352 45.833 0.00 0.00 45.32 3.69
4870 7955 3.451178 GTGAGTACACATGGATGTAGGGT 59.549 47.826 0.00 0.00 45.32 4.34
4871 7956 4.060038 GTGAGTACACATGGATGTAGGG 57.940 50.000 0.00 0.00 45.32 3.53
4883 7968 1.272769 GAGGTGTGAGGGTGAGTACAC 59.727 57.143 0.00 0.00 45.27 2.90
4884 7969 1.147191 AGAGGTGTGAGGGTGAGTACA 59.853 52.381 0.00 0.00 0.00 2.90
4885 7970 1.819903 GAGAGGTGTGAGGGTGAGTAC 59.180 57.143 0.00 0.00 0.00 2.73
4886 7971 1.711375 AGAGAGGTGTGAGGGTGAGTA 59.289 52.381 0.00 0.00 0.00 2.59
4887 7972 0.485099 AGAGAGGTGTGAGGGTGAGT 59.515 55.000 0.00 0.00 0.00 3.41
4888 7973 1.181786 GAGAGAGGTGTGAGGGTGAG 58.818 60.000 0.00 0.00 0.00 3.51
4889 7974 0.780637 AGAGAGAGGTGTGAGGGTGA 59.219 55.000 0.00 0.00 0.00 4.02
4890 7975 1.181786 GAGAGAGAGGTGTGAGGGTG 58.818 60.000 0.00 0.00 0.00 4.61
4891 7976 1.005450 GAGAGAGAGAGGTGTGAGGGT 59.995 57.143 0.00 0.00 0.00 4.34
4892 7977 1.284785 AGAGAGAGAGAGGTGTGAGGG 59.715 57.143 0.00 0.00 0.00 4.30
4893 7978 2.239654 AGAGAGAGAGAGAGGTGTGAGG 59.760 54.545 0.00 0.00 0.00 3.86
4894 7979 3.198635 AGAGAGAGAGAGAGAGGTGTGAG 59.801 52.174 0.00 0.00 0.00 3.51
4895 7980 3.181329 AGAGAGAGAGAGAGAGGTGTGA 58.819 50.000 0.00 0.00 0.00 3.58
4896 7981 3.535561 GAGAGAGAGAGAGAGAGGTGTG 58.464 54.545 0.00 0.00 0.00 3.82
4897 7982 2.505819 GGAGAGAGAGAGAGAGAGGTGT 59.494 54.545 0.00 0.00 0.00 4.16
4898 7983 2.158755 GGGAGAGAGAGAGAGAGAGGTG 60.159 59.091 0.00 0.00 0.00 4.00
4899 7984 2.127708 GGGAGAGAGAGAGAGAGAGGT 58.872 57.143 0.00 0.00 0.00 3.85
4900 7985 2.370189 GAGGGAGAGAGAGAGAGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
4901 7986 3.041211 TGAGGGAGAGAGAGAGAGAGAG 58.959 54.545 0.00 0.00 0.00 3.20
4902 7987 2.771943 GTGAGGGAGAGAGAGAGAGAGA 59.228 54.545 0.00 0.00 0.00 3.10
4903 7988 2.505407 TGTGAGGGAGAGAGAGAGAGAG 59.495 54.545 0.00 0.00 0.00 3.20
4904 7989 2.556766 TGTGAGGGAGAGAGAGAGAGA 58.443 52.381 0.00 0.00 0.00 3.10
4905 7990 3.117926 TCATGTGAGGGAGAGAGAGAGAG 60.118 52.174 0.00 0.00 0.00 3.20
4906 7991 2.849318 TCATGTGAGGGAGAGAGAGAGA 59.151 50.000 0.00 0.00 0.00 3.10
4907 7992 3.117926 TCTCATGTGAGGGAGAGAGAGAG 60.118 52.174 9.94 0.00 42.30 3.20
4908 7993 2.849318 TCTCATGTGAGGGAGAGAGAGA 59.151 50.000 9.94 0.00 42.30 3.10
4909 7994 3.295585 TCTCATGTGAGGGAGAGAGAG 57.704 52.381 9.94 0.00 42.30 3.20
4910 7995 3.969466 ATCTCATGTGAGGGAGAGAGA 57.031 47.619 9.94 0.00 42.91 3.10
4911 7996 4.217510 AGAATCTCATGTGAGGGAGAGAG 58.782 47.826 9.94 0.00 42.91 3.20
4912 7997 4.262891 AGAATCTCATGTGAGGGAGAGA 57.737 45.455 9.94 0.00 42.91 3.10
4913 7998 5.129155 AGAAAGAATCTCATGTGAGGGAGAG 59.871 44.000 9.94 0.00 42.91 3.20
4914 7999 5.028802 AGAAAGAATCTCATGTGAGGGAGA 58.971 41.667 9.94 0.00 43.71 3.71
4915 8000 5.356291 AGAAAGAATCTCATGTGAGGGAG 57.644 43.478 9.94 0.00 42.30 4.30
4916 8001 5.013495 ACAAGAAAGAATCTCATGTGAGGGA 59.987 40.000 9.94 0.00 42.30 4.20
4917 8002 5.251764 ACAAGAAAGAATCTCATGTGAGGG 58.748 41.667 9.94 0.00 42.30 4.30
4918 8003 6.654161 AGAACAAGAAAGAATCTCATGTGAGG 59.346 38.462 9.94 0.00 42.30 3.86
4919 8004 7.387122 TCAGAACAAGAAAGAATCTCATGTGAG 59.613 37.037 3.61 3.61 43.36 3.51
4920 8005 7.219322 TCAGAACAAGAAAGAATCTCATGTGA 58.781 34.615 0.00 0.00 37.42 3.58
4921 8006 7.430992 TCAGAACAAGAAAGAATCTCATGTG 57.569 36.000 0.00 0.00 37.42 3.21
4922 8007 8.632906 AATCAGAACAAGAAAGAATCTCATGT 57.367 30.769 0.00 0.00 37.42 3.21
4923 8008 9.909644 AAAATCAGAACAAGAAAGAATCTCATG 57.090 29.630 0.00 0.00 37.42 3.07
4925 8010 9.740239 CAAAAATCAGAACAAGAAAGAATCTCA 57.260 29.630 0.00 0.00 37.42 3.27
4926 8011 9.956720 TCAAAAATCAGAACAAGAAAGAATCTC 57.043 29.630 0.00 0.00 37.42 2.75
4931 8016 8.819974 GCATTTCAAAAATCAGAACAAGAAAGA 58.180 29.630 0.00 0.00 0.00 2.52
4932 8017 8.605746 TGCATTTCAAAAATCAGAACAAGAAAG 58.394 29.630 0.00 0.00 0.00 2.62
4933 8018 8.389603 GTGCATTTCAAAAATCAGAACAAGAAA 58.610 29.630 0.00 0.00 0.00 2.52
4934 8019 7.548427 TGTGCATTTCAAAAATCAGAACAAGAA 59.452 29.630 0.00 0.00 0.00 2.52
4935 8020 7.040494 TGTGCATTTCAAAAATCAGAACAAGA 58.960 30.769 0.00 0.00 0.00 3.02
4936 8021 7.236674 TGTGCATTTCAAAAATCAGAACAAG 57.763 32.000 0.00 0.00 0.00 3.16
4937 8022 7.606858 TTGTGCATTTCAAAAATCAGAACAA 57.393 28.000 0.00 0.00 0.00 2.83
4938 8023 7.254829 CCATTGTGCATTTCAAAAATCAGAACA 60.255 33.333 0.00 0.00 0.00 3.18
4939 8024 7.073265 CCATTGTGCATTTCAAAAATCAGAAC 58.927 34.615 0.00 0.00 0.00 3.01
4940 8025 6.293516 GCCATTGTGCATTTCAAAAATCAGAA 60.294 34.615 0.00 0.00 0.00 3.02
4941 8026 5.179742 GCCATTGTGCATTTCAAAAATCAGA 59.820 36.000 0.00 0.00 0.00 3.27
4942 8027 5.180492 AGCCATTGTGCATTTCAAAAATCAG 59.820 36.000 0.00 0.00 0.00 2.90
4943 8028 5.064558 AGCCATTGTGCATTTCAAAAATCA 58.935 33.333 0.00 0.00 0.00 2.57
4944 8029 5.616488 AGCCATTGTGCATTTCAAAAATC 57.384 34.783 0.00 0.00 0.00 2.17
4945 8030 5.996513 TGTAGCCATTGTGCATTTCAAAAAT 59.003 32.000 0.00 0.00 0.00 1.82
4946 8031 5.363101 TGTAGCCATTGTGCATTTCAAAAA 58.637 33.333 0.00 0.00 0.00 1.94
4947 8032 4.953667 TGTAGCCATTGTGCATTTCAAAA 58.046 34.783 0.00 0.00 0.00 2.44
4948 8033 4.597404 TGTAGCCATTGTGCATTTCAAA 57.403 36.364 0.00 0.00 0.00 2.69
4949 8034 4.039004 AGTTGTAGCCATTGTGCATTTCAA 59.961 37.500 0.00 0.00 0.00 2.69
4950 8035 3.573538 AGTTGTAGCCATTGTGCATTTCA 59.426 39.130 0.00 0.00 0.00 2.69
4951 8036 4.082571 AGAGTTGTAGCCATTGTGCATTTC 60.083 41.667 0.00 0.00 0.00 2.17
4952 8037 3.828451 AGAGTTGTAGCCATTGTGCATTT 59.172 39.130 0.00 0.00 0.00 2.32
4953 8038 3.424703 AGAGTTGTAGCCATTGTGCATT 58.575 40.909 0.00 0.00 0.00 3.56
4954 8039 3.077484 AGAGTTGTAGCCATTGTGCAT 57.923 42.857 0.00 0.00 0.00 3.96
4955 8040 2.566833 AGAGTTGTAGCCATTGTGCA 57.433 45.000 0.00 0.00 0.00 4.57
4956 8041 4.695455 TCTTTAGAGTTGTAGCCATTGTGC 59.305 41.667 0.00 0.00 0.00 4.57
4957 8042 6.992063 ATCTTTAGAGTTGTAGCCATTGTG 57.008 37.500 0.00 0.00 0.00 3.33
4958 8043 9.686683 AAATATCTTTAGAGTTGTAGCCATTGT 57.313 29.630 0.00 0.00 0.00 2.71
4960 8045 9.905713 TGAAATATCTTTAGAGTTGTAGCCATT 57.094 29.630 0.00 0.00 0.00 3.16
4991 8076 6.098266 AGGATGTTTTAGTGAAGGTGCTTTTT 59.902 34.615 0.00 0.00 0.00 1.94
4992 8077 5.598417 AGGATGTTTTAGTGAAGGTGCTTTT 59.402 36.000 0.00 0.00 0.00 2.27
4993 8078 5.140454 AGGATGTTTTAGTGAAGGTGCTTT 58.860 37.500 0.00 0.00 0.00 3.51
4994 8079 4.729868 AGGATGTTTTAGTGAAGGTGCTT 58.270 39.130 0.00 0.00 0.00 3.91
4995 8080 4.373156 AGGATGTTTTAGTGAAGGTGCT 57.627 40.909 0.00 0.00 0.00 4.40
4996 8081 4.278419 ACAAGGATGTTTTAGTGAAGGTGC 59.722 41.667 0.00 0.00 35.91 5.01
5010 8095 2.107204 AGAAGGCACAGAACAAGGATGT 59.893 45.455 0.00 0.00 43.14 3.06
5011 8096 2.486982 CAGAAGGCACAGAACAAGGATG 59.513 50.000 0.00 0.00 0.00 3.51
5012 8097 2.373169 TCAGAAGGCACAGAACAAGGAT 59.627 45.455 0.00 0.00 0.00 3.24
5013 8098 1.768275 TCAGAAGGCACAGAACAAGGA 59.232 47.619 0.00 0.00 0.00 3.36
5014 8099 2.260844 TCAGAAGGCACAGAACAAGG 57.739 50.000 0.00 0.00 0.00 3.61
5015 8100 4.843220 ATTTCAGAAGGCACAGAACAAG 57.157 40.909 0.00 0.00 0.00 3.16
5016 8101 9.679661 TTATATATTTCAGAAGGCACAGAACAA 57.320 29.630 0.00 0.00 0.00 2.83
5017 8102 9.851686 ATTATATATTTCAGAAGGCACAGAACA 57.148 29.630 0.00 0.00 0.00 3.18
5020 8105 9.494271 GTCATTATATATTTCAGAAGGCACAGA 57.506 33.333 0.00 0.00 0.00 3.41
5021 8106 9.499479 AGTCATTATATATTTCAGAAGGCACAG 57.501 33.333 0.00 0.00 0.00 3.66
5040 8125 9.628500 TCATACTCTTTAGAGCTGTAGTCATTA 57.372 33.333 6.67 0.00 45.79 1.90
5041 8126 8.526667 TCATACTCTTTAGAGCTGTAGTCATT 57.473 34.615 6.67 0.00 45.79 2.57
5042 8127 8.165239 CTCATACTCTTTAGAGCTGTAGTCAT 57.835 38.462 6.67 0.00 45.79 3.06
5043 8128 7.561021 CTCATACTCTTTAGAGCTGTAGTCA 57.439 40.000 6.67 0.00 45.79 3.41
5053 8138 7.671302 ACTTCTGTTTGCTCATACTCTTTAGA 58.329 34.615 0.00 0.00 0.00 2.10
5054 8139 7.897575 ACTTCTGTTTGCTCATACTCTTTAG 57.102 36.000 0.00 0.00 0.00 1.85
5055 8140 7.931407 TCAACTTCTGTTTGCTCATACTCTTTA 59.069 33.333 0.00 0.00 33.52 1.85
5056 8141 6.767902 TCAACTTCTGTTTGCTCATACTCTTT 59.232 34.615 0.00 0.00 33.52 2.52
5057 8142 6.291377 TCAACTTCTGTTTGCTCATACTCTT 58.709 36.000 0.00 0.00 33.52 2.85
5058 8143 5.858381 TCAACTTCTGTTTGCTCATACTCT 58.142 37.500 0.00 0.00 33.52 3.24
5059 8144 6.203723 ACTTCAACTTCTGTTTGCTCATACTC 59.796 38.462 0.00 0.00 33.52 2.59
5060 8145 6.017605 CACTTCAACTTCTGTTTGCTCATACT 60.018 38.462 0.00 0.00 33.52 2.12
5061 8146 6.017934 TCACTTCAACTTCTGTTTGCTCATAC 60.018 38.462 0.00 0.00 33.52 2.39
5062 8147 6.054941 TCACTTCAACTTCTGTTTGCTCATA 58.945 36.000 0.00 0.00 33.52 2.15
5063 8148 4.883585 TCACTTCAACTTCTGTTTGCTCAT 59.116 37.500 0.00 0.00 33.52 2.90
5064 8149 4.260985 TCACTTCAACTTCTGTTTGCTCA 58.739 39.130 0.00 0.00 33.52 4.26
5065 8150 4.882671 TCACTTCAACTTCTGTTTGCTC 57.117 40.909 0.00 0.00 33.52 4.26
5066 8151 4.439289 GCTTCACTTCAACTTCTGTTTGCT 60.439 41.667 0.00 0.00 33.52 3.91
5067 8152 3.793492 GCTTCACTTCAACTTCTGTTTGC 59.207 43.478 0.00 0.00 33.52 3.68
5068 8153 4.985413 TGCTTCACTTCAACTTCTGTTTG 58.015 39.130 0.00 0.00 33.52 2.93
5069 8154 4.439289 GCTGCTTCACTTCAACTTCTGTTT 60.439 41.667 0.00 0.00 33.52 2.83
5070 8155 3.065925 GCTGCTTCACTTCAACTTCTGTT 59.934 43.478 0.00 0.00 36.75 3.16
5071 8156 2.615912 GCTGCTTCACTTCAACTTCTGT 59.384 45.455 0.00 0.00 0.00 3.41
5072 8157 2.031333 GGCTGCTTCACTTCAACTTCTG 60.031 50.000 0.00 0.00 0.00 3.02
5073 8158 2.225467 GGCTGCTTCACTTCAACTTCT 58.775 47.619 0.00 0.00 0.00 2.85
5074 8159 1.268079 GGGCTGCTTCACTTCAACTTC 59.732 52.381 0.00 0.00 0.00 3.01
5075 8160 1.133668 AGGGCTGCTTCACTTCAACTT 60.134 47.619 0.00 0.00 0.00 2.66
5076 8161 0.475906 AGGGCTGCTTCACTTCAACT 59.524 50.000 0.00 0.00 0.00 3.16
5077 8162 0.595095 CAGGGCTGCTTCACTTCAAC 59.405 55.000 0.00 0.00 0.00 3.18
5078 8163 3.025924 CAGGGCTGCTTCACTTCAA 57.974 52.632 0.00 0.00 0.00 2.69
5079 8164 4.806936 CAGGGCTGCTTCACTTCA 57.193 55.556 0.00 0.00 0.00 3.02
5110 8195 5.880901 AGGTGATTTAGATCCAAGTGTGTT 58.119 37.500 0.00 0.00 0.00 3.32
5111 8196 5.491982 GAGGTGATTTAGATCCAAGTGTGT 58.508 41.667 0.00 0.00 0.00 3.72
5156 8241 3.256879 TGACTGTGAGATGACTGAGGAAC 59.743 47.826 0.00 0.00 0.00 3.62
5172 8257 2.632996 TGAAGAGGACGGAAATGACTGT 59.367 45.455 0.00 0.00 0.00 3.55
5185 8270 5.333581 TGAGATGGAGTAACTTGAAGAGGA 58.666 41.667 0.00 0.00 0.00 3.71
5198 8283 3.565307 GGAGATGACTCTGAGATGGAGT 58.435 50.000 12.44 0.00 45.37 3.85
5220 8305 3.181472 TGACCATGGACGAATCTGATGAG 60.181 47.826 21.47 0.00 0.00 2.90
5232 8317 4.148128 AGATCAATCTGTGACCATGGAC 57.852 45.455 21.47 13.94 39.72 4.02
5243 8328 6.589523 ACTTGAAGAAGACGAAGATCAATCTG 59.410 38.462 0.00 0.00 33.54 2.90
5247 8332 6.280643 TGAACTTGAAGAAGACGAAGATCAA 58.719 36.000 0.00 0.00 32.98 2.57
5300 8385 9.435688 AAGACCAATTATTGCAAACCTAAATTC 57.564 29.630 1.71 0.00 0.00 2.17
5308 8393 9.855021 AAGTGTATAAGACCAATTATTGCAAAC 57.145 29.630 1.71 0.00 0.00 2.93
5316 8401 9.609346 GCTAAAGGAAGTGTATAAGACCAATTA 57.391 33.333 0.00 0.00 0.00 1.40
5318 8403 7.054751 GGCTAAAGGAAGTGTATAAGACCAAT 58.945 38.462 0.00 0.00 0.00 3.16
5329 8414 0.771127 TGCTGGGCTAAAGGAAGTGT 59.229 50.000 0.00 0.00 0.00 3.55
5330 8415 1.909700 TTGCTGGGCTAAAGGAAGTG 58.090 50.000 0.00 0.00 0.00 3.16
5352 8437 5.469760 GGTGGGAATGCATTAATTTATTGGC 59.530 40.000 12.97 0.00 0.00 4.52
5359 8444 5.222007 TGTTTTGGGTGGGAATGCATTAATT 60.222 36.000 12.97 0.00 0.00 1.40
5435 8520 1.202604 TCTTGTTTCAGGTCGTGTCCC 60.203 52.381 0.00 0.00 0.00 4.46
5440 8525 1.134521 TGTGCTCTTGTTTCAGGTCGT 60.135 47.619 0.00 0.00 0.00 4.34
5479 8564 3.328382 TTGCTACATTACGAGTGCCTT 57.672 42.857 0.00 0.00 0.00 4.35
5481 8566 4.094294 TCAATTTGCTACATTACGAGTGCC 59.906 41.667 0.00 0.00 0.00 5.01
5483 8568 6.775088 ACATCAATTTGCTACATTACGAGTG 58.225 36.000 0.00 0.00 0.00 3.51
5484 8569 6.985188 ACATCAATTTGCTACATTACGAGT 57.015 33.333 0.00 0.00 0.00 4.18
5485 8570 8.673626 AAAACATCAATTTGCTACATTACGAG 57.326 30.769 0.00 0.00 0.00 4.18
5486 8571 9.767684 CTAAAACATCAATTTGCTACATTACGA 57.232 29.630 0.00 0.00 0.00 3.43
5487 8572 9.767684 TCTAAAACATCAATTTGCTACATTACG 57.232 29.630 0.00 0.00 0.00 3.18
5493 8578 9.278734 GCTTACTCTAAAACATCAATTTGCTAC 57.721 33.333 0.00 0.00 0.00 3.58
5551 8637 1.812922 GTCATGAGCAGGTGAGCCG 60.813 63.158 0.00 0.00 40.50 5.52
5575 8661 4.834496 TGGATGGTTTTCTTGAGAAAGCAT 59.166 37.500 17.98 16.06 43.91 3.79
5605 8691 3.947834 GGTTCATTTCCTGGGTCACTATG 59.052 47.826 0.00 0.00 0.00 2.23
5613 8699 0.324645 CCTGGGGTTCATTTCCTGGG 60.325 60.000 0.00 0.00 36.42 4.45
5636 8722 2.232452 CGAAGGGTCTGACAAGTCTCAT 59.768 50.000 10.38 0.00 0.00 2.90
5644 8730 3.007506 TGCTTAATTCGAAGGGTCTGACA 59.992 43.478 10.38 0.00 0.00 3.58
5645 8731 3.596214 TGCTTAATTCGAAGGGTCTGAC 58.404 45.455 3.35 0.00 0.00 3.51
5650 8736 6.399639 TTTTCTTTGCTTAATTCGAAGGGT 57.600 33.333 3.35 0.00 0.00 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.