Multiple sequence alignment - TraesCS5B01G006400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G006400 chr5B 100.000 3620 0 0 1 3620 7545050 7541431 0.000000e+00 6685.0
1 TraesCS5B01G006400 chr5B 100.000 1012 0 0 3971 4982 7541080 7540069 0.000000e+00 1869.0
2 TraesCS5B01G006400 chr5B 86.232 138 16 2 1120 1257 7969869 7970003 4.020000e-31 147.0
3 TraesCS5B01G006400 chr5B 94.444 36 2 0 4268 4303 7088158 7088123 6.970000e-04 56.5
4 TraesCS5B01G006400 chr5A 94.897 3625 152 19 1 3620 4851748 4848152 0.000000e+00 5638.0
5 TraesCS5B01G006400 chr5A 86.562 640 27 18 3975 4589 4848102 4847497 0.000000e+00 651.0
6 TraesCS5B01G006400 chr5A 84.756 328 39 10 2925 3244 6612885 6612561 8.050000e-83 318.0
7 TraesCS5B01G006400 chr5A 82.209 326 29 13 3972 4289 4975662 4975966 2.300000e-63 254.0
8 TraesCS5B01G006400 chr5A 98.039 51 0 1 4134 4184 4668716 4668667 2.470000e-13 87.9
9 TraesCS5B01G006400 chr5D 95.184 2720 116 13 908 3620 7413388 7410677 0.000000e+00 4283.0
10 TraesCS5B01G006400 chr5D 93.858 928 34 10 2 924 7414315 7413406 0.000000e+00 1376.0
11 TraesCS5B01G006400 chr5D 88.122 362 20 11 3975 4335 7410627 7410288 4.640000e-110 409.0
12 TraesCS5B01G006400 chr5D 82.500 240 37 4 3082 3320 7718391 7718156 6.540000e-49 206.0
13 TraesCS5B01G006400 chr5D 81.013 237 31 10 5 232 37022115 37022346 5.130000e-40 176.0
14 TraesCS5B01G006400 chr5D 84.496 129 14 5 2091 2219 7571455 7571333 6.770000e-24 122.0
15 TraesCS5B01G006400 chr5D 94.737 57 1 2 1447 1503 7571853 7571799 2.470000e-13 87.9
16 TraesCS5B01G006400 chr5D 95.000 40 2 0 3017 3056 7718430 7718391 4.160000e-06 63.9
17 TraesCS5B01G006400 chr5D 96.970 33 1 0 415 447 7718711 7718743 6.970000e-04 56.5
18 TraesCS5B01G006400 chr4B 72.280 671 138 30 2970 3620 18163007 18162365 1.110000e-36 165.0
19 TraesCS5B01G006400 chr1B 81.592 201 31 4 344 544 44908164 44907970 1.440000e-35 161.0
20 TraesCS5B01G006400 chr4D 82.659 173 29 1 2970 3141 9496655 9496483 8.640000e-33 152.0
21 TraesCS5B01G006400 chr2B 100.000 28 0 0 1436 1463 632411150 632411123 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G006400 chr5B 7540069 7545050 4981 True 4277.000000 6685 100.0000 1 4982 2 chr5B.!!$R2 4981
1 TraesCS5B01G006400 chr5A 4847497 4851748 4251 True 3144.500000 5638 90.7295 1 4589 2 chr5A.!!$R3 4588
2 TraesCS5B01G006400 chr5D 7410288 7414315 4027 True 2022.666667 4283 92.3880 2 4335 3 chr5D.!!$R1 4333

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
678 683 0.961753 GGCCTGAACCTCAGTTTTGG 59.038 55.000 0.00 0.00 42.80 3.28 F
1515 1555 0.462047 CGTCCTTGCCATACTGGTCC 60.462 60.000 0.00 0.00 40.46 4.46 F
2343 2388 0.653114 GCTCGGCGAGGAAGAAAATC 59.347 55.000 35.03 13.67 0.00 2.17 F
3104 3161 1.129998 CAATGTGCCGAGAAGCAAGAG 59.870 52.381 0.00 0.00 46.19 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2343 2388 0.036388 TTGCCTTCCTTGCTAGACGG 60.036 55.0 0.0 0.00 0.00 4.79 R
3495 3552 0.930310 CACCGGCATTGTAGATGTCG 59.070 55.0 0.0 6.07 45.57 4.35 R
3972 4029 0.251341 ACAAATGCTGTCACCCCCTC 60.251 55.0 0.0 0.00 29.87 4.30 R
4942 5024 0.249120 CATGGCGGTCTCTACAACCA 59.751 55.0 0.0 0.00 36.53 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 77 3.479949 GAGTTTTCGAACAGAATTCCGC 58.520 45.455 0.00 0.00 38.86 5.54
86 87 1.021390 AGAATTCCGCCGAGCAACTG 61.021 55.000 0.65 0.00 0.00 3.16
87 88 1.003839 AATTCCGCCGAGCAACTGA 60.004 52.632 0.00 0.00 0.00 3.41
131 132 2.092049 TGCAGATTGATCAGGAAGCCAT 60.092 45.455 0.00 0.00 0.00 4.40
132 133 2.553172 GCAGATTGATCAGGAAGCCATC 59.447 50.000 0.00 0.00 0.00 3.51
211 212 1.066430 GGTACTCCTGGCAAACGATCA 60.066 52.381 0.00 0.00 0.00 2.92
257 258 8.129840 TCATTCGCTGAAACTCTAGTTATCTAC 58.870 37.037 0.00 0.00 37.25 2.59
338 339 8.983702 TGTCCATATGATTCTTGAATGAATGA 57.016 30.769 3.65 0.00 36.86 2.57
339 340 9.411189 TGTCCATATGATTCTTGAATGAATGAA 57.589 29.630 3.65 0.00 36.86 2.57
468 469 6.500589 TTATCCTGATAACAAAGGAGGAGG 57.499 41.667 0.00 0.00 45.63 4.30
603 606 2.393271 AATCCCACTTCTCGAGCAAG 57.607 50.000 7.81 14.23 0.00 4.01
637 642 5.376625 AGGACTGCATTTCAAACAGACTTA 58.623 37.500 0.00 0.00 35.38 2.24
638 643 5.239525 AGGACTGCATTTCAAACAGACTTAC 59.760 40.000 0.00 0.00 35.38 2.34
639 644 5.438761 ACTGCATTTCAAACAGACTTACC 57.561 39.130 0.00 0.00 35.38 2.85
641 646 6.296026 ACTGCATTTCAAACAGACTTACCTA 58.704 36.000 0.00 0.00 35.38 3.08
678 683 0.961753 GGCCTGAACCTCAGTTTTGG 59.038 55.000 0.00 0.00 42.80 3.28
743 748 2.223665 ACTGCAGAGCAAGCTGTTTTTC 60.224 45.455 23.35 0.00 40.58 2.29
755 760 5.132897 AGCTGTTTTTCTGTTGTCAAACA 57.867 34.783 0.00 0.00 44.06 2.83
786 791 4.887748 TCAGAGTGTTGTGGAGATCTTTC 58.112 43.478 0.00 0.00 0.00 2.62
906 912 3.091545 TCAGCCCATTTCATTTCTGTCC 58.908 45.455 0.00 0.00 0.00 4.02
931 971 2.686915 GCAGGAGGTTGGATTGATCTTG 59.313 50.000 0.00 0.00 0.00 3.02
956 996 4.335594 ACTGAAACTTGCTACTGGTTGTTC 59.664 41.667 0.00 0.00 0.00 3.18
983 1023 3.443099 TCTATGCTTCACGGTGATCTG 57.557 47.619 12.26 6.78 0.00 2.90
1193 1233 1.674962 GAACTTCATGGAGATGCCTGC 59.325 52.381 8.39 0.00 37.63 4.85
1278 1318 3.443045 CACCATGGGCAACGCTCC 61.443 66.667 18.09 0.00 37.60 4.70
1443 1483 2.989253 GTTCCGGTTGGGCAAGGG 60.989 66.667 0.00 0.00 35.24 3.95
1455 1495 2.999063 CAAGGGCAAGGGCAAGGG 60.999 66.667 0.00 0.00 43.71 3.95
1515 1555 0.462047 CGTCCTTGCCATACTGGTCC 60.462 60.000 0.00 0.00 40.46 4.46
2002 2043 9.155053 GATTAGTTTGACTTTTAACACGTTGAG 57.845 33.333 0.00 0.00 0.00 3.02
2009 2050 4.274214 ACTTTTAACACGTTGAGGTTAGCC 59.726 41.667 0.00 0.00 31.71 3.93
2038 2079 7.069344 TGATTGGTAGATTCTGGATGAGACTA 58.931 38.462 0.00 0.00 0.00 2.59
2089 2130 6.915544 TGAATGTTGCTTTGTATTTTGCAA 57.084 29.167 0.00 0.00 42.16 4.08
2090 2131 7.493743 TGAATGTTGCTTTGTATTTTGCAAT 57.506 28.000 0.00 0.00 45.25 3.56
2096 2141 8.025445 TGTTGCTTTGTATTTTGCAATGTTTTT 58.975 25.926 0.00 0.00 45.25 1.94
2270 2315 1.008875 TGCAGACAATCTCGCGACAC 61.009 55.000 3.71 0.00 0.00 3.67
2311 2356 5.121925 ACGCTATCAATGATCAGATCAATGC 59.878 40.000 19.99 14.41 43.50 3.56
2343 2388 0.653114 GCTCGGCGAGGAAGAAAATC 59.347 55.000 35.03 13.67 0.00 2.17
2402 2447 2.034104 TTGATCAGCAGCTAAGGCAG 57.966 50.000 0.00 0.00 41.70 4.85
2463 2508 2.444895 GGAGACCGCAGAGGGGAT 60.445 66.667 7.14 0.00 46.96 3.85
2527 2572 1.270678 ACACTTCCTTCACCCGTAAGC 60.271 52.381 0.00 0.00 0.00 3.09
2537 2582 4.015872 TCACCCGTAAGCATCTTTCTTT 57.984 40.909 0.00 0.00 0.00 2.52
2538 2583 4.000988 TCACCCGTAAGCATCTTTCTTTC 58.999 43.478 0.00 0.00 0.00 2.62
2540 2585 4.455877 CACCCGTAAGCATCTTTCTTTCTT 59.544 41.667 0.00 0.00 0.00 2.52
2541 2586 4.695928 ACCCGTAAGCATCTTTCTTTCTTC 59.304 41.667 0.00 0.00 0.00 2.87
2543 2588 5.355350 CCCGTAAGCATCTTTCTTTCTTCAT 59.645 40.000 0.00 0.00 0.00 2.57
2544 2589 6.457528 CCCGTAAGCATCTTTCTTTCTTCATC 60.458 42.308 0.00 0.00 0.00 2.92
2545 2590 6.092670 CCGTAAGCATCTTTCTTTCTTCATCA 59.907 38.462 0.00 0.00 0.00 3.07
2546 2591 7.361201 CCGTAAGCATCTTTCTTTCTTCATCAA 60.361 37.037 0.00 0.00 0.00 2.57
2547 2592 7.691463 CGTAAGCATCTTTCTTTCTTCATCAAG 59.309 37.037 0.00 0.00 0.00 3.02
2548 2593 7.521871 AAGCATCTTTCTTTCTTCATCAAGT 57.478 32.000 0.00 0.00 0.00 3.16
2551 2596 7.447853 AGCATCTTTCTTTCTTCATCAAGTTCT 59.552 33.333 0.00 0.00 0.00 3.01
2552 2597 8.081025 GCATCTTTCTTTCTTCATCAAGTTCTT 58.919 33.333 0.00 0.00 0.00 2.52
2555 2600 8.624776 TCTTTCTTTCTTCATCAAGTTCTTTCC 58.375 33.333 0.00 0.00 0.00 3.13
2556 2601 7.880160 TTCTTTCTTCATCAAGTTCTTTCCA 57.120 32.000 0.00 0.00 0.00 3.53
2557 2602 7.502120 TCTTTCTTCATCAAGTTCTTTCCAG 57.498 36.000 0.00 0.00 0.00 3.86
2559 2604 8.210946 TCTTTCTTCATCAAGTTCTTTCCAGTA 58.789 33.333 0.00 0.00 0.00 2.74
2560 2605 8.746052 TTTCTTCATCAAGTTCTTTCCAGTAA 57.254 30.769 0.00 0.00 0.00 2.24
2561 2606 8.746052 TTCTTCATCAAGTTCTTTCCAGTAAA 57.254 30.769 0.00 0.00 0.00 2.01
2562 2607 8.154649 TCTTCATCAAGTTCTTTCCAGTAAAC 57.845 34.615 0.00 0.00 0.00 2.01
2563 2608 7.773224 TCTTCATCAAGTTCTTTCCAGTAAACA 59.227 33.333 0.00 0.00 0.00 2.83
2564 2609 7.873719 TCATCAAGTTCTTTCCAGTAAACAA 57.126 32.000 0.00 0.00 0.00 2.83
2565 2610 8.463930 TCATCAAGTTCTTTCCAGTAAACAAT 57.536 30.769 0.00 0.00 0.00 2.71
2566 2611 8.912988 TCATCAAGTTCTTTCCAGTAAACAATT 58.087 29.630 0.00 0.00 0.00 2.32
2567 2612 9.533253 CATCAAGTTCTTTCCAGTAAACAATTT 57.467 29.630 0.00 0.00 0.00 1.82
2568 2613 9.750125 ATCAAGTTCTTTCCAGTAAACAATTTC 57.250 29.630 0.00 0.00 0.00 2.17
2569 2614 8.966868 TCAAGTTCTTTCCAGTAAACAATTTCT 58.033 29.630 0.00 0.00 0.00 2.52
2570 2615 9.586435 CAAGTTCTTTCCAGTAAACAATTTCTT 57.414 29.630 0.00 0.00 0.00 2.52
2704 2759 7.407393 ACAAGGAGTCAGGTAATACTTACTC 57.593 40.000 9.96 9.96 36.39 2.59
2787 2843 5.796279 GCAATTCGCATAAATGTAGAAGC 57.204 39.130 8.27 0.00 41.79 3.86
2902 2958 4.022416 CCACAGCATAAAACCTGCAACTTA 60.022 41.667 0.00 0.00 42.15 2.24
2916 2972 6.655425 ACCTGCAACTTAGTATTTTCTCCTTC 59.345 38.462 0.00 0.00 0.00 3.46
3091 3148 1.338200 ACTCTTCCTCCGACAATGTGC 60.338 52.381 0.00 0.00 0.00 4.57
3104 3161 1.129998 CAATGTGCCGAGAAGCAAGAG 59.870 52.381 0.00 0.00 46.19 2.85
3244 3301 1.996191 CTGTTAGCTTCCAGAACGAGC 59.004 52.381 6.49 0.00 36.68 5.03
3252 3309 2.359975 CAGAACGAGCCCAACCCC 60.360 66.667 0.00 0.00 0.00 4.95
3255 3312 4.324991 AACGAGCCCAACCCCGAC 62.325 66.667 0.00 0.00 0.00 4.79
3285 3342 4.774124 TCATGAACCTGATGATGAAGGAC 58.226 43.478 0.00 0.00 37.01 3.85
3306 3363 4.570663 CGATCCGGTGAGGCGGAC 62.571 72.222 0.00 0.00 40.77 4.79
3353 3410 2.202544 GCAGCACTCGGACGAGAG 60.203 66.667 26.41 19.79 44.53 3.20
3423 3480 1.910880 CAACGTATCGCTCACGCTC 59.089 57.895 0.00 0.00 43.10 5.03
3483 3540 2.429069 CAAGCAAACTTCGCCGGC 60.429 61.111 19.07 19.07 32.29 6.13
3487 3544 4.424430 CAAACTTCGCCGGCGTCG 62.424 66.667 44.16 35.57 40.74 5.12
3528 3585 2.574399 GGTGCTCCTCTCGGTGTC 59.426 66.667 0.00 0.00 0.00 3.67
3549 3606 3.136763 CAGCATTGCATCTTCGGACTAT 58.863 45.455 11.91 0.00 0.00 2.12
4076 4134 2.923121 TGCCATTTGATACAGGAGAGC 58.077 47.619 0.00 0.00 0.00 4.09
4077 4135 2.239402 TGCCATTTGATACAGGAGAGCA 59.761 45.455 0.00 0.00 0.00 4.26
4078 4136 3.117776 TGCCATTTGATACAGGAGAGCAT 60.118 43.478 0.00 0.00 0.00 3.79
4133 4191 2.043772 TGGGGGTGATAGGGGGTG 59.956 66.667 0.00 0.00 0.00 4.61
4134 4192 2.776963 GGGGGTGATAGGGGGTGG 60.777 72.222 0.00 0.00 0.00 4.61
4135 4193 2.776963 GGGGTGATAGGGGGTGGG 60.777 72.222 0.00 0.00 0.00 4.61
4136 4194 2.043941 GGGTGATAGGGGGTGGGT 59.956 66.667 0.00 0.00 0.00 4.51
4221 4279 5.853282 GCTTTGTGCTCAGTATTGTAAAGTG 59.147 40.000 0.00 0.00 38.95 3.16
4223 4281 7.561021 TTTGTGCTCAGTATTGTAAAGTGAA 57.439 32.000 0.00 0.00 0.00 3.18
4245 4303 2.103263 GGCCACTTCAGGGTGATAGTAG 59.897 54.545 0.00 0.00 39.34 2.57
4271 4329 7.431249 ACATTGCTAAATGATGGCTATTCTTG 58.569 34.615 5.49 0.00 45.17 3.02
4272 4330 6.395426 TTGCTAAATGATGGCTATTCTTGG 57.605 37.500 0.00 0.00 0.00 3.61
4276 4334 6.072783 GCTAAATGATGGCTATTCTTGGTCTC 60.073 42.308 0.00 0.00 0.00 3.36
4277 4335 3.845781 TGATGGCTATTCTTGGTCTCC 57.154 47.619 0.00 0.00 0.00 3.71
4286 4344 2.534042 TCTTGGTCTCCTCTACCCTG 57.466 55.000 0.00 0.00 36.06 4.45
4313 4391 2.169832 TGTGCTCAGCTAAAGGTGAC 57.830 50.000 7.75 6.36 46.24 3.67
4360 4438 2.032528 CAACGAGAGGGCAAGCCA 59.967 61.111 13.87 0.00 37.98 4.75
4361 4439 2.037136 CAACGAGAGGGCAAGCCAG 61.037 63.158 13.87 1.25 37.98 4.85
4362 4440 2.217038 AACGAGAGGGCAAGCCAGA 61.217 57.895 13.87 0.00 37.98 3.86
4363 4441 1.768684 AACGAGAGGGCAAGCCAGAA 61.769 55.000 13.87 0.00 37.98 3.02
4365 4443 1.376466 GAGAGGGCAAGCCAGAACA 59.624 57.895 13.87 0.00 37.98 3.18
4366 4444 0.250901 GAGAGGGCAAGCCAGAACAA 60.251 55.000 13.87 0.00 37.98 2.83
4367 4445 0.185901 AGAGGGCAAGCCAGAACAAA 59.814 50.000 13.87 0.00 37.98 2.83
4368 4446 1.039856 GAGGGCAAGCCAGAACAAAA 58.960 50.000 13.87 0.00 37.98 2.44
4370 4448 0.752658 GGGCAAGCCAGAACAAAACT 59.247 50.000 13.87 0.00 37.98 2.66
4371 4449 1.960689 GGGCAAGCCAGAACAAAACTA 59.039 47.619 13.87 0.00 37.98 2.24
4372 4450 2.364002 GGGCAAGCCAGAACAAAACTAA 59.636 45.455 13.87 0.00 37.98 2.24
4374 4452 4.503123 GGGCAAGCCAGAACAAAACTAAAT 60.503 41.667 13.87 0.00 37.98 1.40
4375 4453 5.056480 GGCAAGCCAGAACAAAACTAAATT 58.944 37.500 6.14 0.00 35.81 1.82
4376 4454 5.177511 GGCAAGCCAGAACAAAACTAAATTC 59.822 40.000 6.14 0.00 35.81 2.17
4377 4455 5.177511 GCAAGCCAGAACAAAACTAAATTCC 59.822 40.000 0.00 0.00 0.00 3.01
4378 4456 6.515832 CAAGCCAGAACAAAACTAAATTCCT 58.484 36.000 0.00 0.00 0.00 3.36
4379 4457 6.731292 AGCCAGAACAAAACTAAATTCCTT 57.269 33.333 0.00 0.00 0.00 3.36
4380 4458 6.749139 AGCCAGAACAAAACTAAATTCCTTC 58.251 36.000 0.00 0.00 0.00 3.46
4387 4465 6.981722 ACAAAACTAAATTCCTTCAGCGAAT 58.018 32.000 0.00 0.00 0.00 3.34
4419 4497 9.528018 GTTACAAACAAAATGAGATGGAAGAAA 57.472 29.630 0.00 0.00 0.00 2.52
4427 4505 9.872757 CAAAATGAGATGGAAGAAAAACAAATG 57.127 29.630 0.00 0.00 0.00 2.32
4461 4539 6.744537 GTGAAGCTATTTACTGCACATGAAAG 59.255 38.462 0.00 0.00 42.42 2.62
4462 4540 6.430925 TGAAGCTATTTACTGCACATGAAAGT 59.569 34.615 0.00 2.23 0.00 2.66
4463 4541 6.187125 AGCTATTTACTGCACATGAAAGTG 57.813 37.500 0.00 0.00 42.37 3.16
4473 4551 4.223700 TGCACATGAAAGTGTCTCCTCTAT 59.776 41.667 0.00 0.00 41.52 1.98
4474 4552 5.181748 GCACATGAAAGTGTCTCCTCTATT 58.818 41.667 0.00 0.00 41.52 1.73
4540 4622 8.421249 AGGGAAATGTGATAACTCAATCAAAA 57.579 30.769 0.00 0.00 37.61 2.44
4541 4623 9.039165 AGGGAAATGTGATAACTCAATCAAAAT 57.961 29.630 0.00 0.00 37.61 1.82
4542 4624 9.305925 GGGAAATGTGATAACTCAATCAAAATC 57.694 33.333 0.00 0.00 37.61 2.17
4589 4671 4.260538 CGCTGGTGAGATAATCTTTGCTTC 60.261 45.833 0.00 0.00 0.00 3.86
4590 4672 4.637534 GCTGGTGAGATAATCTTTGCTTCA 59.362 41.667 0.00 0.00 0.00 3.02
4591 4673 5.298777 GCTGGTGAGATAATCTTTGCTTCAT 59.701 40.000 0.00 0.00 0.00 2.57
4592 4674 6.688637 TGGTGAGATAATCTTTGCTTCATG 57.311 37.500 0.00 0.00 0.00 3.07
4593 4675 6.182627 TGGTGAGATAATCTTTGCTTCATGT 58.817 36.000 0.00 0.00 0.00 3.21
4594 4676 6.317140 TGGTGAGATAATCTTTGCTTCATGTC 59.683 38.462 0.00 0.00 0.00 3.06
4595 4677 6.317140 GGTGAGATAATCTTTGCTTCATGTCA 59.683 38.462 0.00 0.00 0.00 3.58
4596 4678 7.185453 GTGAGATAATCTTTGCTTCATGTCAC 58.815 38.462 0.00 0.00 32.05 3.67
4597 4679 6.317140 TGAGATAATCTTTGCTTCATGTCACC 59.683 38.462 0.00 0.00 0.00 4.02
4598 4680 6.421485 AGATAATCTTTGCTTCATGTCACCT 58.579 36.000 0.00 0.00 0.00 4.00
4599 4681 7.568349 AGATAATCTTTGCTTCATGTCACCTA 58.432 34.615 0.00 0.00 0.00 3.08
4600 4682 5.886960 AATCTTTGCTTCATGTCACCTAC 57.113 39.130 0.00 0.00 0.00 3.18
4601 4683 4.623932 TCTTTGCTTCATGTCACCTACT 57.376 40.909 0.00 0.00 0.00 2.57
4602 4684 4.569943 TCTTTGCTTCATGTCACCTACTC 58.430 43.478 0.00 0.00 0.00 2.59
4603 4685 4.284490 TCTTTGCTTCATGTCACCTACTCT 59.716 41.667 0.00 0.00 0.00 3.24
4604 4686 4.623932 TTGCTTCATGTCACCTACTCTT 57.376 40.909 0.00 0.00 0.00 2.85
4605 4687 4.193826 TGCTTCATGTCACCTACTCTTC 57.806 45.455 0.00 0.00 0.00 2.87
4606 4688 3.578282 TGCTTCATGTCACCTACTCTTCA 59.422 43.478 0.00 0.00 0.00 3.02
4607 4689 4.223700 TGCTTCATGTCACCTACTCTTCAT 59.776 41.667 0.00 0.00 0.00 2.57
4608 4690 5.181748 GCTTCATGTCACCTACTCTTCATT 58.818 41.667 0.00 0.00 0.00 2.57
4609 4691 5.064452 GCTTCATGTCACCTACTCTTCATTG 59.936 44.000 0.00 0.00 0.00 2.82
4610 4692 4.507710 TCATGTCACCTACTCTTCATTGC 58.492 43.478 0.00 0.00 0.00 3.56
4611 4693 4.020307 TCATGTCACCTACTCTTCATTGCA 60.020 41.667 0.00 0.00 0.00 4.08
4612 4694 4.350368 TGTCACCTACTCTTCATTGCAA 57.650 40.909 0.00 0.00 0.00 4.08
4613 4695 4.910195 TGTCACCTACTCTTCATTGCAAT 58.090 39.130 5.99 5.99 0.00 3.56
4614 4696 6.048732 TGTCACCTACTCTTCATTGCAATA 57.951 37.500 12.53 0.00 0.00 1.90
4615 4697 6.472016 TGTCACCTACTCTTCATTGCAATAA 58.528 36.000 12.53 0.00 0.00 1.40
4616 4698 6.939730 TGTCACCTACTCTTCATTGCAATAAA 59.060 34.615 12.53 2.66 0.00 1.40
4617 4699 7.119699 TGTCACCTACTCTTCATTGCAATAAAG 59.880 37.037 15.21 15.21 0.00 1.85
4618 4700 6.094048 TCACCTACTCTTCATTGCAATAAAGC 59.906 38.462 16.36 0.00 0.00 3.51
4619 4701 6.094603 CACCTACTCTTCATTGCAATAAAGCT 59.905 38.462 16.36 7.35 34.99 3.74
4620 4702 6.660949 ACCTACTCTTCATTGCAATAAAGCTT 59.339 34.615 16.36 8.64 34.99 3.74
4621 4703 7.177392 ACCTACTCTTCATTGCAATAAAGCTTT 59.823 33.333 16.36 17.30 34.99 3.51
4622 4704 8.031277 CCTACTCTTCATTGCAATAAAGCTTTT 58.969 33.333 18.47 2.49 34.99 2.27
4623 4705 7.647907 ACTCTTCATTGCAATAAAGCTTTTG 57.352 32.000 18.47 11.72 34.99 2.44
4624 4706 6.647895 ACTCTTCATTGCAATAAAGCTTTTGG 59.352 34.615 18.47 8.42 34.99 3.28
4625 4707 5.933463 TCTTCATTGCAATAAAGCTTTTGGG 59.067 36.000 18.47 8.06 34.99 4.12
4626 4708 4.577875 TCATTGCAATAAAGCTTTTGGGG 58.422 39.130 18.47 6.27 34.99 4.96
4627 4709 2.470983 TGCAATAAAGCTTTTGGGGC 57.529 45.000 18.47 15.80 34.99 5.80
4628 4710 1.977129 TGCAATAAAGCTTTTGGGGCT 59.023 42.857 18.47 0.00 42.31 5.19
4629 4711 2.289569 TGCAATAAAGCTTTTGGGGCTG 60.290 45.455 18.47 7.16 40.19 4.85
4630 4712 2.028203 GCAATAAAGCTTTTGGGGCTGA 60.028 45.455 18.47 0.00 40.19 4.26
4631 4713 3.369787 GCAATAAAGCTTTTGGGGCTGAT 60.370 43.478 18.47 0.00 40.19 2.90
4632 4714 4.141959 GCAATAAAGCTTTTGGGGCTGATA 60.142 41.667 18.47 0.00 40.19 2.15
4633 4715 5.453762 GCAATAAAGCTTTTGGGGCTGATAT 60.454 40.000 18.47 0.00 40.19 1.63
4634 4716 6.585416 CAATAAAGCTTTTGGGGCTGATATT 58.415 36.000 18.47 3.92 40.19 1.28
4635 4717 7.686615 GCAATAAAGCTTTTGGGGCTGATATTA 60.687 37.037 18.47 0.00 40.19 0.98
4636 4718 5.859205 AAAGCTTTTGGGGCTGATATTAG 57.141 39.130 5.69 0.00 40.19 1.73
4637 4719 4.526438 AGCTTTTGGGGCTGATATTAGT 57.474 40.909 0.00 0.00 38.73 2.24
4638 4720 5.646692 AGCTTTTGGGGCTGATATTAGTA 57.353 39.130 0.00 0.00 38.73 1.82
4639 4721 5.377478 AGCTTTTGGGGCTGATATTAGTAC 58.623 41.667 0.00 0.00 38.73 2.73
4640 4722 4.519350 GCTTTTGGGGCTGATATTAGTACC 59.481 45.833 0.00 0.31 0.00 3.34
4641 4723 5.690364 GCTTTTGGGGCTGATATTAGTACCT 60.690 44.000 9.74 0.00 0.00 3.08
4642 4724 5.987019 TTTGGGGCTGATATTAGTACCTT 57.013 39.130 9.74 0.00 0.00 3.50
4643 4725 7.454553 TTTTGGGGCTGATATTAGTACCTTA 57.545 36.000 9.74 0.41 0.00 2.69
4644 4726 7.454553 TTTGGGGCTGATATTAGTACCTTAA 57.545 36.000 9.74 4.84 0.00 1.85
4645 4727 6.429521 TGGGGCTGATATTAGTACCTTAAC 57.570 41.667 9.74 0.00 0.00 2.01
4646 4728 5.308759 TGGGGCTGATATTAGTACCTTAACC 59.691 44.000 9.74 0.00 0.00 2.85
4647 4729 5.308759 GGGGCTGATATTAGTACCTTAACCA 59.691 44.000 9.22 0.00 0.00 3.67
4648 4730 6.465084 GGGCTGATATTAGTACCTTAACCAG 58.535 44.000 0.00 0.00 0.00 4.00
4662 4744 5.948992 CTTAACCAGGAGACTTTTGGAAG 57.051 43.478 11.84 4.13 40.21 3.46
4663 4745 5.621193 CTTAACCAGGAGACTTTTGGAAGA 58.379 41.667 11.84 0.00 40.21 2.87
4664 4746 3.493767 ACCAGGAGACTTTTGGAAGAC 57.506 47.619 11.84 0.00 40.21 3.01
4665 4747 2.106684 ACCAGGAGACTTTTGGAAGACC 59.893 50.000 11.84 0.00 40.21 3.85
4666 4748 2.417719 CAGGAGACTTTTGGAAGACCG 58.582 52.381 0.00 0.00 40.21 4.79
4667 4749 2.047830 AGGAGACTTTTGGAAGACCGT 58.952 47.619 0.00 0.00 37.44 4.83
4668 4750 2.143925 GGAGACTTTTGGAAGACCGTG 58.856 52.381 0.00 0.00 39.42 4.94
4669 4751 2.224209 GGAGACTTTTGGAAGACCGTGA 60.224 50.000 0.00 0.00 39.42 4.35
4670 4752 3.060602 GAGACTTTTGGAAGACCGTGAG 58.939 50.000 0.00 0.00 39.42 3.51
4671 4753 2.434702 AGACTTTTGGAAGACCGTGAGT 59.565 45.455 0.00 0.00 39.42 3.41
4672 4754 3.118371 AGACTTTTGGAAGACCGTGAGTT 60.118 43.478 0.00 0.00 39.42 3.01
4673 4755 3.203716 ACTTTTGGAAGACCGTGAGTTC 58.796 45.455 0.00 0.00 39.42 3.01
4674 4756 2.992124 TTTGGAAGACCGTGAGTTCA 57.008 45.000 0.00 0.00 39.42 3.18
4675 4757 2.234300 TTGGAAGACCGTGAGTTCAC 57.766 50.000 2.16 2.16 43.15 3.18
4676 4758 0.391597 TGGAAGACCGTGAGTTCACC 59.608 55.000 6.68 0.00 43.66 4.02
4677 4759 0.680061 GGAAGACCGTGAGTTCACCT 59.320 55.000 6.68 0.00 43.66 4.00
4678 4760 1.070289 GGAAGACCGTGAGTTCACCTT 59.930 52.381 6.68 4.68 43.66 3.50
4679 4761 2.298163 GGAAGACCGTGAGTTCACCTTA 59.702 50.000 6.68 0.00 43.66 2.69
4680 4762 3.056035 GGAAGACCGTGAGTTCACCTTAT 60.056 47.826 6.68 0.00 43.66 1.73
4681 4763 4.562963 GGAAGACCGTGAGTTCACCTTATT 60.563 45.833 6.68 0.00 43.66 1.40
4682 4764 4.618920 AGACCGTGAGTTCACCTTATTT 57.381 40.909 6.68 0.00 43.66 1.40
4683 4765 4.969484 AGACCGTGAGTTCACCTTATTTT 58.031 39.130 6.68 0.00 43.66 1.82
4684 4766 5.374071 AGACCGTGAGTTCACCTTATTTTT 58.626 37.500 6.68 0.00 43.66 1.94
4685 4767 5.238650 AGACCGTGAGTTCACCTTATTTTTG 59.761 40.000 6.68 0.00 43.66 2.44
4686 4768 4.885325 ACCGTGAGTTCACCTTATTTTTGT 59.115 37.500 6.68 0.00 43.66 2.83
4687 4769 5.358725 ACCGTGAGTTCACCTTATTTTTGTT 59.641 36.000 6.68 0.00 43.66 2.83
4688 4770 6.127563 ACCGTGAGTTCACCTTATTTTTGTTT 60.128 34.615 6.68 0.00 43.66 2.83
4689 4771 6.198216 CCGTGAGTTCACCTTATTTTTGTTTG 59.802 38.462 6.68 0.00 43.66 2.93
4690 4772 6.970043 CGTGAGTTCACCTTATTTTTGTTTGA 59.030 34.615 6.68 0.00 43.66 2.69
4691 4773 7.165812 CGTGAGTTCACCTTATTTTTGTTTGAG 59.834 37.037 6.68 0.00 43.66 3.02
4692 4774 7.435192 GTGAGTTCACCTTATTTTTGTTTGAGG 59.565 37.037 0.72 0.00 40.85 3.86
4693 4775 7.340743 TGAGTTCACCTTATTTTTGTTTGAGGA 59.659 33.333 0.00 0.00 0.00 3.71
4694 4776 8.073467 AGTTCACCTTATTTTTGTTTGAGGAA 57.927 30.769 0.00 0.00 0.00 3.36
4695 4777 8.704668 AGTTCACCTTATTTTTGTTTGAGGAAT 58.295 29.630 0.00 0.00 0.00 3.01
4696 4778 9.325198 GTTCACCTTATTTTTGTTTGAGGAATT 57.675 29.630 0.00 0.00 0.00 2.17
4697 4779 8.885494 TCACCTTATTTTTGTTTGAGGAATTG 57.115 30.769 0.00 0.00 0.00 2.32
4698 4780 7.930865 TCACCTTATTTTTGTTTGAGGAATTGG 59.069 33.333 0.00 0.00 0.00 3.16
4699 4781 6.710295 ACCTTATTTTTGTTTGAGGAATTGGC 59.290 34.615 0.00 0.00 0.00 4.52
4700 4782 6.936335 CCTTATTTTTGTTTGAGGAATTGGCT 59.064 34.615 0.00 0.00 0.00 4.75
4701 4783 7.095102 CCTTATTTTTGTTTGAGGAATTGGCTG 60.095 37.037 0.00 0.00 0.00 4.85
4702 4784 5.350504 TTTTTGTTTGAGGAATTGGCTGA 57.649 34.783 0.00 0.00 0.00 4.26
4703 4785 5.549742 TTTTGTTTGAGGAATTGGCTGAT 57.450 34.783 0.00 0.00 0.00 2.90
4704 4786 5.549742 TTTGTTTGAGGAATTGGCTGATT 57.450 34.783 0.00 0.00 0.00 2.57
4705 4787 4.524316 TGTTTGAGGAATTGGCTGATTG 57.476 40.909 0.00 0.00 0.00 2.67
4706 4788 4.151121 TGTTTGAGGAATTGGCTGATTGA 58.849 39.130 0.00 0.00 0.00 2.57
4707 4789 4.219070 TGTTTGAGGAATTGGCTGATTGAG 59.781 41.667 0.00 0.00 0.00 3.02
4723 4805 8.140677 GCTGATTGAGCTGCCTATATATTAAG 57.859 38.462 0.00 0.00 45.21 1.85
4724 4806 7.254727 GCTGATTGAGCTGCCTATATATTAAGC 60.255 40.741 0.00 0.00 45.21 3.09
4725 4807 7.623630 TGATTGAGCTGCCTATATATTAAGCA 58.376 34.615 0.00 0.00 33.08 3.91
4734 4816 8.848474 TGCCTATATATTAAGCAGGAGAAAAC 57.152 34.615 3.09 0.00 0.00 2.43
4735 4817 8.436778 TGCCTATATATTAAGCAGGAGAAAACA 58.563 33.333 3.09 0.00 0.00 2.83
4736 4818 9.284968 GCCTATATATTAAGCAGGAGAAAACAA 57.715 33.333 3.09 0.00 0.00 2.83
4744 4826 8.865590 TTAAGCAGGAGAAAACAAATACAAAC 57.134 30.769 0.00 0.00 0.00 2.93
4745 4827 6.463995 AGCAGGAGAAAACAAATACAAACA 57.536 33.333 0.00 0.00 0.00 2.83
4746 4828 7.054491 AGCAGGAGAAAACAAATACAAACAT 57.946 32.000 0.00 0.00 0.00 2.71
4747 4829 7.147976 AGCAGGAGAAAACAAATACAAACATC 58.852 34.615 0.00 0.00 0.00 3.06
4748 4830 6.366061 GCAGGAGAAAACAAATACAAACATCC 59.634 38.462 0.00 0.00 0.00 3.51
4749 4831 7.661040 CAGGAGAAAACAAATACAAACATCCT 58.339 34.615 0.00 0.00 32.61 3.24
4750 4832 8.143835 CAGGAGAAAACAAATACAAACATCCTT 58.856 33.333 0.00 0.00 30.01 3.36
4751 4833 9.362151 AGGAGAAAACAAATACAAACATCCTTA 57.638 29.630 0.00 0.00 0.00 2.69
4752 4834 9.406828 GGAGAAAACAAATACAAACATCCTTAC 57.593 33.333 0.00 0.00 0.00 2.34
4753 4835 9.959749 GAGAAAACAAATACAAACATCCTTACA 57.040 29.630 0.00 0.00 0.00 2.41
4792 4874 9.838339 ATAATTAATCAGGTACAAGTTCTGGAG 57.162 33.333 0.00 0.00 0.00 3.86
4793 4875 6.928348 TTAATCAGGTACAAGTTCTGGAGA 57.072 37.500 0.00 0.00 0.00 3.71
4794 4876 5.825593 AATCAGGTACAAGTTCTGGAGAA 57.174 39.130 0.00 0.00 0.00 2.87
4795 4877 6.380079 AATCAGGTACAAGTTCTGGAGAAT 57.620 37.500 0.00 0.00 36.33 2.40
4796 4878 5.825593 TCAGGTACAAGTTCTGGAGAATT 57.174 39.130 0.00 0.00 36.33 2.17
4797 4879 5.794894 TCAGGTACAAGTTCTGGAGAATTC 58.205 41.667 0.00 0.00 36.33 2.17
4798 4880 5.544176 TCAGGTACAAGTTCTGGAGAATTCT 59.456 40.000 7.95 7.95 36.33 2.40
4799 4881 5.641209 CAGGTACAAGTTCTGGAGAATTCTG 59.359 44.000 14.00 0.00 36.33 3.02
4800 4882 5.544176 AGGTACAAGTTCTGGAGAATTCTGA 59.456 40.000 14.00 0.79 36.33 3.27
4801 4883 5.872070 GGTACAAGTTCTGGAGAATTCTGAG 59.128 44.000 14.00 8.64 36.33 3.35
4802 4884 5.559148 ACAAGTTCTGGAGAATTCTGAGT 57.441 39.130 14.00 0.00 36.33 3.41
4803 4885 5.303971 ACAAGTTCTGGAGAATTCTGAGTG 58.696 41.667 14.00 5.49 36.33 3.51
4804 4886 5.163258 ACAAGTTCTGGAGAATTCTGAGTGT 60.163 40.000 14.00 6.07 36.33 3.55
4805 4887 5.146010 AGTTCTGGAGAATTCTGAGTGTC 57.854 43.478 14.00 0.00 36.33 3.67
4806 4888 4.590647 AGTTCTGGAGAATTCTGAGTGTCA 59.409 41.667 14.00 1.04 36.33 3.58
4807 4889 4.527509 TCTGGAGAATTCTGAGTGTCAC 57.472 45.455 14.00 0.00 0.00 3.67
4808 4890 4.155709 TCTGGAGAATTCTGAGTGTCACT 58.844 43.478 14.00 4.81 0.00 3.41
4809 4891 5.325239 TCTGGAGAATTCTGAGTGTCACTA 58.675 41.667 14.00 0.00 0.00 2.74
4810 4892 5.775195 TCTGGAGAATTCTGAGTGTCACTAA 59.225 40.000 14.00 0.00 0.00 2.24
4811 4893 6.030548 TGGAGAATTCTGAGTGTCACTAAG 57.969 41.667 14.00 10.84 0.00 2.18
4812 4894 4.867608 GGAGAATTCTGAGTGTCACTAAGC 59.132 45.833 14.00 0.00 0.00 3.09
4813 4895 4.826556 AGAATTCTGAGTGTCACTAAGCC 58.173 43.478 12.13 0.00 0.00 4.35
4814 4896 4.284490 AGAATTCTGAGTGTCACTAAGCCA 59.716 41.667 12.13 2.56 0.00 4.75
4815 4897 4.623932 ATTCTGAGTGTCACTAAGCCAA 57.376 40.909 12.13 3.57 0.00 4.52
4816 4898 4.623932 TTCTGAGTGTCACTAAGCCAAT 57.376 40.909 12.13 0.00 0.00 3.16
4817 4899 3.930336 TCTGAGTGTCACTAAGCCAATG 58.070 45.455 12.13 0.00 0.00 2.82
4818 4900 3.578282 TCTGAGTGTCACTAAGCCAATGA 59.422 43.478 12.13 0.00 0.00 2.57
4819 4901 4.040339 TCTGAGTGTCACTAAGCCAATGAA 59.960 41.667 12.13 0.00 0.00 2.57
4820 4902 4.910195 TGAGTGTCACTAAGCCAATGAAT 58.090 39.130 5.21 0.00 0.00 2.57
4821 4903 4.937620 TGAGTGTCACTAAGCCAATGAATC 59.062 41.667 5.21 0.00 0.00 2.52
4822 4904 3.935203 AGTGTCACTAAGCCAATGAATCG 59.065 43.478 2.87 0.00 0.00 3.34
4823 4905 3.932710 GTGTCACTAAGCCAATGAATCGA 59.067 43.478 0.00 0.00 0.00 3.59
4824 4906 4.572389 GTGTCACTAAGCCAATGAATCGAT 59.428 41.667 0.00 0.00 0.00 3.59
4825 4907 5.753438 GTGTCACTAAGCCAATGAATCGATA 59.247 40.000 0.00 0.00 0.00 2.92
4826 4908 5.985530 TGTCACTAAGCCAATGAATCGATAG 59.014 40.000 0.00 0.00 0.00 2.08
4827 4909 4.991056 TCACTAAGCCAATGAATCGATAGC 59.009 41.667 0.00 0.00 0.00 2.97
4828 4910 4.751600 CACTAAGCCAATGAATCGATAGCA 59.248 41.667 0.00 0.14 0.00 3.49
4829 4911 5.410746 CACTAAGCCAATGAATCGATAGCAT 59.589 40.000 0.00 2.91 0.00 3.79
4830 4912 6.000219 ACTAAGCCAATGAATCGATAGCATT 59.000 36.000 16.40 16.40 32.83 3.56
4831 4913 4.761235 AGCCAATGAATCGATAGCATTG 57.239 40.909 29.12 29.12 45.11 2.82
4848 4930 3.504863 CATTGGTTGCATAGTGTCTTGC 58.495 45.455 0.00 0.00 39.33 4.01
4849 4931 2.566833 TGGTTGCATAGTGTCTTGCT 57.433 45.000 0.00 0.00 39.60 3.91
4850 4932 2.862541 TGGTTGCATAGTGTCTTGCTT 58.137 42.857 0.00 0.00 39.60 3.91
4851 4933 2.553602 TGGTTGCATAGTGTCTTGCTTG 59.446 45.455 0.00 0.00 39.60 4.01
4852 4934 2.813754 GGTTGCATAGTGTCTTGCTTGA 59.186 45.455 0.00 0.00 39.60 3.02
4853 4935 3.441572 GGTTGCATAGTGTCTTGCTTGAT 59.558 43.478 0.00 0.00 39.60 2.57
4854 4936 4.437930 GGTTGCATAGTGTCTTGCTTGATC 60.438 45.833 0.00 0.00 39.60 2.92
4855 4937 3.941573 TGCATAGTGTCTTGCTTGATCA 58.058 40.909 0.00 0.00 39.60 2.92
4856 4938 4.520179 TGCATAGTGTCTTGCTTGATCAT 58.480 39.130 0.00 0.00 39.60 2.45
4857 4939 5.673514 TGCATAGTGTCTTGCTTGATCATA 58.326 37.500 0.00 0.00 39.60 2.15
4858 4940 6.293698 TGCATAGTGTCTTGCTTGATCATAT 58.706 36.000 0.00 0.00 39.60 1.78
4859 4941 6.204108 TGCATAGTGTCTTGCTTGATCATATG 59.796 38.462 0.00 0.00 39.60 1.78
4860 4942 6.204301 GCATAGTGTCTTGCTTGATCATATGT 59.796 38.462 1.90 0.00 35.95 2.29
4861 4943 7.573627 CATAGTGTCTTGCTTGATCATATGTG 58.426 38.462 1.90 0.00 0.00 3.21
4862 4944 5.494724 AGTGTCTTGCTTGATCATATGTGT 58.505 37.500 1.90 0.00 0.00 3.72
4863 4945 6.643388 AGTGTCTTGCTTGATCATATGTGTA 58.357 36.000 1.90 0.00 0.00 2.90
4864 4946 6.760298 AGTGTCTTGCTTGATCATATGTGTAG 59.240 38.462 1.90 0.00 0.00 2.74
4865 4947 5.525012 TGTCTTGCTTGATCATATGTGTAGC 59.475 40.000 1.90 0.76 0.00 3.58
4866 4948 5.525012 GTCTTGCTTGATCATATGTGTAGCA 59.475 40.000 11.08 11.08 0.00 3.49
4867 4949 5.525012 TCTTGCTTGATCATATGTGTAGCAC 59.475 40.000 14.02 0.00 34.56 4.40
4868 4950 4.129380 TGCTTGATCATATGTGTAGCACC 58.871 43.478 11.08 0.00 32.73 5.01
4869 4951 4.141642 TGCTTGATCATATGTGTAGCACCT 60.142 41.667 11.08 0.00 32.73 4.00
4870 4952 4.450419 GCTTGATCATATGTGTAGCACCTC 59.550 45.833 8.14 0.00 32.73 3.85
4871 4953 4.243007 TGATCATATGTGTAGCACCTCG 57.757 45.455 1.90 0.00 32.73 4.63
4872 4954 3.636764 TGATCATATGTGTAGCACCTCGT 59.363 43.478 1.90 0.00 32.73 4.18
4873 4955 3.710326 TCATATGTGTAGCACCTCGTC 57.290 47.619 1.90 0.00 32.73 4.20
4874 4956 3.288092 TCATATGTGTAGCACCTCGTCT 58.712 45.455 1.90 0.00 32.73 4.18
4875 4957 3.699538 TCATATGTGTAGCACCTCGTCTT 59.300 43.478 1.90 0.00 32.73 3.01
4876 4958 2.656560 ATGTGTAGCACCTCGTCTTC 57.343 50.000 0.00 0.00 32.73 2.87
4877 4959 1.617322 TGTGTAGCACCTCGTCTTCT 58.383 50.000 0.00 0.00 32.73 2.85
4878 4960 1.961394 TGTGTAGCACCTCGTCTTCTT 59.039 47.619 0.00 0.00 32.73 2.52
4879 4961 2.364324 TGTGTAGCACCTCGTCTTCTTT 59.636 45.455 0.00 0.00 32.73 2.52
4880 4962 3.570975 TGTGTAGCACCTCGTCTTCTTTA 59.429 43.478 0.00 0.00 32.73 1.85
4881 4963 4.038282 TGTGTAGCACCTCGTCTTCTTTAA 59.962 41.667 0.00 0.00 32.73 1.52
4882 4964 4.621886 GTGTAGCACCTCGTCTTCTTTAAG 59.378 45.833 0.00 0.00 0.00 1.85
4883 4965 2.689646 AGCACCTCGTCTTCTTTAAGC 58.310 47.619 0.00 0.00 32.36 3.09
4884 4966 2.037251 AGCACCTCGTCTTCTTTAAGCA 59.963 45.455 0.00 0.00 32.36 3.91
4885 4967 2.157863 GCACCTCGTCTTCTTTAAGCAC 59.842 50.000 0.00 0.00 32.36 4.40
4886 4968 3.654414 CACCTCGTCTTCTTTAAGCACT 58.346 45.455 0.00 0.00 32.36 4.40
4887 4969 4.058817 CACCTCGTCTTCTTTAAGCACTT 58.941 43.478 0.00 0.00 32.36 3.16
4888 4970 4.511826 CACCTCGTCTTCTTTAAGCACTTT 59.488 41.667 0.00 0.00 32.36 2.66
4889 4971 4.750598 ACCTCGTCTTCTTTAAGCACTTTC 59.249 41.667 0.00 0.00 32.36 2.62
4890 4972 4.991687 CCTCGTCTTCTTTAAGCACTTTCT 59.008 41.667 0.00 0.00 32.36 2.52
4891 4973 5.467063 CCTCGTCTTCTTTAAGCACTTTCTT 59.533 40.000 0.00 0.00 32.36 2.52
4892 4974 6.346999 CCTCGTCTTCTTTAAGCACTTTCTTC 60.347 42.308 0.00 0.00 32.36 2.87
4893 4975 6.281405 TCGTCTTCTTTAAGCACTTTCTTCT 58.719 36.000 0.00 0.00 32.36 2.85
4894 4976 6.421202 TCGTCTTCTTTAAGCACTTTCTTCTC 59.579 38.462 0.00 0.00 32.36 2.87
4895 4977 6.201044 CGTCTTCTTTAAGCACTTTCTTCTCA 59.799 38.462 0.00 0.00 32.36 3.27
4896 4978 7.254455 CGTCTTCTTTAAGCACTTTCTTCTCAA 60.254 37.037 0.00 0.00 32.36 3.02
4897 4979 8.398665 GTCTTCTTTAAGCACTTTCTTCTCAAA 58.601 33.333 0.00 0.00 32.36 2.69
4898 4980 8.956426 TCTTCTTTAAGCACTTTCTTCTCAAAA 58.044 29.630 0.00 0.00 32.36 2.44
4899 4981 9.573133 CTTCTTTAAGCACTTTCTTCTCAAAAA 57.427 29.630 0.00 0.00 0.00 1.94
4900 4982 8.911247 TCTTTAAGCACTTTCTTCTCAAAAAC 57.089 30.769 0.00 0.00 0.00 2.43
4901 4983 8.739972 TCTTTAAGCACTTTCTTCTCAAAAACT 58.260 29.630 0.00 0.00 0.00 2.66
4902 4984 8.911247 TTTAAGCACTTTCTTCTCAAAAACTC 57.089 30.769 0.00 0.00 0.00 3.01
4903 4985 6.765915 AAGCACTTTCTTCTCAAAAACTCT 57.234 33.333 0.00 0.00 0.00 3.24
4904 4986 6.765915 AGCACTTTCTTCTCAAAAACTCTT 57.234 33.333 0.00 0.00 0.00 2.85
4905 4987 6.790282 AGCACTTTCTTCTCAAAAACTCTTC 58.210 36.000 0.00 0.00 0.00 2.87
4906 4988 6.601217 AGCACTTTCTTCTCAAAAACTCTTCT 59.399 34.615 0.00 0.00 0.00 2.85
4907 4989 6.909895 GCACTTTCTTCTCAAAAACTCTTCTC 59.090 38.462 0.00 0.00 0.00 2.87
4908 4990 7.201688 GCACTTTCTTCTCAAAAACTCTTCTCT 60.202 37.037 0.00 0.00 0.00 3.10
4909 4991 8.672815 CACTTTCTTCTCAAAAACTCTTCTCTT 58.327 33.333 0.00 0.00 0.00 2.85
4910 4992 8.888716 ACTTTCTTCTCAAAAACTCTTCTCTTC 58.111 33.333 0.00 0.00 0.00 2.87
4911 4993 7.793927 TTCTTCTCAAAAACTCTTCTCTTCC 57.206 36.000 0.00 0.00 0.00 3.46
4912 4994 5.986135 TCTTCTCAAAAACTCTTCTCTTCCG 59.014 40.000 0.00 0.00 0.00 4.30
4913 4995 4.058817 TCTCAAAAACTCTTCTCTTCCGC 58.941 43.478 0.00 0.00 0.00 5.54
4914 4996 4.061596 CTCAAAAACTCTTCTCTTCCGCT 58.938 43.478 0.00 0.00 0.00 5.52
4915 4997 5.010719 TCTCAAAAACTCTTCTCTTCCGCTA 59.989 40.000 0.00 0.00 0.00 4.26
4916 4998 5.794894 TCAAAAACTCTTCTCTTCCGCTAT 58.205 37.500 0.00 0.00 0.00 2.97
4917 4999 6.231211 TCAAAAACTCTTCTCTTCCGCTATT 58.769 36.000 0.00 0.00 0.00 1.73
4918 5000 6.710744 TCAAAAACTCTTCTCTTCCGCTATTT 59.289 34.615 0.00 0.00 0.00 1.40
4919 5001 6.729391 AAAACTCTTCTCTTCCGCTATTTC 57.271 37.500 0.00 0.00 0.00 2.17
4920 5002 5.669164 AACTCTTCTCTTCCGCTATTTCT 57.331 39.130 0.00 0.00 0.00 2.52
4921 5003 5.004922 ACTCTTCTCTTCCGCTATTTCTG 57.995 43.478 0.00 0.00 0.00 3.02
4922 5004 4.142049 ACTCTTCTCTTCCGCTATTTCTGG 60.142 45.833 0.00 0.00 0.00 3.86
4923 5005 4.023980 TCTTCTCTTCCGCTATTTCTGGA 58.976 43.478 0.00 0.00 0.00 3.86
4924 5006 4.651503 TCTTCTCTTCCGCTATTTCTGGAT 59.348 41.667 0.00 0.00 0.00 3.41
4925 5007 4.327982 TCTCTTCCGCTATTTCTGGATG 57.672 45.455 0.00 0.00 0.00 3.51
4926 5008 3.706594 TCTCTTCCGCTATTTCTGGATGT 59.293 43.478 0.00 0.00 0.00 3.06
4927 5009 4.162320 TCTCTTCCGCTATTTCTGGATGTT 59.838 41.667 0.00 0.00 0.00 2.71
4928 5010 4.442706 TCTTCCGCTATTTCTGGATGTTC 58.557 43.478 0.00 0.00 0.00 3.18
4929 5011 3.194005 TCCGCTATTTCTGGATGTTCC 57.806 47.619 0.00 0.00 36.96 3.62
4930 5012 2.503765 TCCGCTATTTCTGGATGTTCCA 59.496 45.455 0.00 0.00 45.98 3.53
4937 5019 4.811206 TGGATGTTCCAACCCGTG 57.189 55.556 0.00 0.00 45.00 4.94
4938 5020 1.840598 TGGATGTTCCAACCCGTGT 59.159 52.632 0.00 0.00 45.00 4.49
4939 5021 1.057471 TGGATGTTCCAACCCGTGTA 58.943 50.000 0.00 0.00 45.00 2.90
4940 5022 1.002659 TGGATGTTCCAACCCGTGTAG 59.997 52.381 0.00 0.00 45.00 2.74
4941 5023 1.276989 GGATGTTCCAACCCGTGTAGA 59.723 52.381 0.00 0.00 36.28 2.59
4942 5024 2.093128 GGATGTTCCAACCCGTGTAGAT 60.093 50.000 0.00 0.00 36.28 1.98
4943 5025 2.465860 TGTTCCAACCCGTGTAGATG 57.534 50.000 0.00 0.00 0.00 2.90
4944 5026 1.002659 TGTTCCAACCCGTGTAGATGG 59.997 52.381 0.00 0.00 0.00 3.51
4945 5027 1.002773 GTTCCAACCCGTGTAGATGGT 59.997 52.381 0.00 0.00 32.90 3.55
4946 5028 1.354101 TCCAACCCGTGTAGATGGTT 58.646 50.000 0.00 0.00 42.98 3.67
4950 5032 3.604875 AACCCGTGTAGATGGTTGTAG 57.395 47.619 0.00 0.00 40.75 2.74
4951 5033 2.811410 ACCCGTGTAGATGGTTGTAGA 58.189 47.619 0.00 0.00 0.00 2.59
4952 5034 2.758979 ACCCGTGTAGATGGTTGTAGAG 59.241 50.000 0.00 0.00 0.00 2.43
4953 5035 3.021695 CCCGTGTAGATGGTTGTAGAGA 58.978 50.000 0.00 0.00 0.00 3.10
4954 5036 3.181489 CCCGTGTAGATGGTTGTAGAGAC 60.181 52.174 0.00 0.00 0.00 3.36
4955 5037 3.181489 CCGTGTAGATGGTTGTAGAGACC 60.181 52.174 0.00 0.00 37.69 3.85
4956 5038 3.487042 CGTGTAGATGGTTGTAGAGACCG 60.487 52.174 0.00 0.00 40.13 4.79
4957 5039 2.426024 TGTAGATGGTTGTAGAGACCGC 59.574 50.000 0.00 0.00 40.13 5.68
4958 5040 0.824759 AGATGGTTGTAGAGACCGCC 59.175 55.000 0.00 0.00 40.13 6.13
4959 5041 0.535335 GATGGTTGTAGAGACCGCCA 59.465 55.000 0.00 0.00 40.13 5.69
4960 5042 1.139058 GATGGTTGTAGAGACCGCCAT 59.861 52.381 0.00 0.00 39.99 4.40
4961 5043 0.249120 TGGTTGTAGAGACCGCCATG 59.751 55.000 0.00 0.00 40.13 3.66
4962 5044 0.462047 GGTTGTAGAGACCGCCATGG 60.462 60.000 7.63 7.63 46.41 3.66
4963 5045 1.090052 GTTGTAGAGACCGCCATGGC 61.090 60.000 27.67 27.67 43.94 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.996462 TTTACGATGCGAAAGAGGCG 59.004 50.000 0.00 0.00 0.00 5.52
73 74 4.749310 AGCTCAGTTGCTCGGCGG 62.749 66.667 7.21 0.00 39.34 6.13
76 77 2.099431 GCTCAGCTCAGTTGCTCGG 61.099 63.158 0.00 0.00 41.98 4.63
87 88 1.570803 AGAGATGAACCTGCTCAGCT 58.429 50.000 0.00 0.00 44.53 4.24
131 132 2.103538 GCGTTACCGATGCGAGGA 59.896 61.111 0.00 0.00 35.63 3.71
211 212 9.613957 CGAATGATTATCGAGTGATTAGTTACT 57.386 33.333 0.00 0.00 42.76 2.24
233 234 7.133513 CGTAGATAACTAGAGTTTCAGCGAAT 58.866 38.462 0.00 0.00 39.31 3.34
463 464 1.685421 GCTCTGTGCTCCTCCTCCT 60.685 63.158 0.00 0.00 38.95 3.69
464 465 2.730524 GGCTCTGTGCTCCTCCTCC 61.731 68.421 1.44 0.00 42.39 4.30
465 466 2.730524 GGGCTCTGTGCTCCTCCTC 61.731 68.421 1.44 0.00 42.39 3.71
466 467 2.686835 GGGCTCTGTGCTCCTCCT 60.687 66.667 1.44 0.00 42.39 3.69
467 468 2.129555 TTTGGGCTCTGTGCTCCTCC 62.130 60.000 0.00 0.00 42.79 4.30
468 469 0.250901 TTTTGGGCTCTGTGCTCCTC 60.251 55.000 0.00 0.00 42.79 3.71
637 642 2.560981 CGGTTTTGGCAGGATTTTAGGT 59.439 45.455 0.00 0.00 0.00 3.08
638 643 2.094234 CCGGTTTTGGCAGGATTTTAGG 60.094 50.000 0.00 0.00 0.00 2.69
639 644 2.094234 CCCGGTTTTGGCAGGATTTTAG 60.094 50.000 0.00 0.00 0.00 1.85
641 646 0.684535 CCCGGTTTTGGCAGGATTTT 59.315 50.000 0.00 0.00 0.00 1.82
755 760 3.312421 CCACAACACTCTGAACGTGAAAT 59.688 43.478 4.29 0.00 36.29 2.17
844 850 9.736023 CAAGTTTTAAAATCTGAGCAAGTAACT 57.264 29.630 3.52 0.00 0.00 2.24
845 851 8.968242 CCAAGTTTTAAAATCTGAGCAAGTAAC 58.032 33.333 3.52 0.00 0.00 2.50
846 852 8.691797 ACCAAGTTTTAAAATCTGAGCAAGTAA 58.308 29.630 3.52 0.00 0.00 2.24
906 912 2.449464 TCAATCCAACCTCCTGCAATG 58.551 47.619 0.00 0.00 0.00 2.82
931 971 4.814771 ACAACCAGTAGCAAGTTTCAGTAC 59.185 41.667 0.00 0.00 0.00 2.73
956 996 7.978414 AGATCACCGTGAAGCATAGATATTATG 59.022 37.037 5.07 2.37 0.00 1.90
983 1023 3.198853 AGCCATCTCTCTTTTACTGACCC 59.801 47.826 0.00 0.00 0.00 4.46
1176 1216 0.822532 GGGCAGGCATCTCCATGAAG 60.823 60.000 0.00 0.00 37.29 3.02
1193 1233 0.757561 TGCAGAATGATGGCCATGGG 60.758 55.000 26.56 6.74 39.69 4.00
1278 1318 6.758416 TCTTCATATCTTTCACATGACCGAAG 59.242 38.462 0.00 0.00 0.00 3.79
1443 1483 3.698820 CCTTGCCCTTGCCCTTGC 61.699 66.667 0.00 0.00 36.33 4.01
1455 1495 1.744741 GCTCAGAGACAGCCCTTGC 60.745 63.158 0.00 0.00 37.95 4.01
1515 1555 3.813800 CGTCAACATGTCTGGTTTGATG 58.186 45.455 0.00 0.00 0.00 3.07
1974 2015 7.467557 ACGTGTTAAAAGTCAAACTAATCGA 57.532 32.000 0.00 0.00 0.00 3.59
2009 2050 7.718314 TCTCATCCAGAATCTACCAATCAATTG 59.282 37.037 0.00 0.00 37.52 2.32
2270 2315 1.291877 CGTCCTTCAAGCACCGGAAG 61.292 60.000 9.46 0.15 40.11 3.46
2311 2356 1.601663 CGCCGAGCTTCTTCCTGATAG 60.602 57.143 0.00 0.00 0.00 2.08
2343 2388 0.036388 TTGCCTTCCTTGCTAGACGG 60.036 55.000 0.00 0.00 0.00 4.79
2402 2447 1.370900 CTGTTGGAAAGCACGCTGC 60.371 57.895 0.00 2.28 45.46 5.25
2463 2508 2.875933 CTGTAACCGAGTTTTCAGGCAA 59.124 45.455 0.00 0.00 0.00 4.52
2527 2572 9.962783 AAAGAACTTGATGAAGAAAGAAAGATG 57.037 29.630 0.00 0.00 32.98 2.90
2537 2582 7.773224 TGTTTACTGGAAAGAACTTGATGAAGA 59.227 33.333 0.00 0.00 32.98 2.87
2538 2583 7.930217 TGTTTACTGGAAAGAACTTGATGAAG 58.070 34.615 0.00 0.00 35.07 3.02
2540 2585 7.873719 TTGTTTACTGGAAAGAACTTGATGA 57.126 32.000 0.00 0.00 0.00 2.92
2541 2586 9.533253 AAATTGTTTACTGGAAAGAACTTGATG 57.467 29.630 0.00 0.00 33.48 3.07
2543 2588 8.966868 AGAAATTGTTTACTGGAAAGAACTTGA 58.033 29.630 0.00 0.00 33.48 3.02
2544 2589 9.586435 AAGAAATTGTTTACTGGAAAGAACTTG 57.414 29.630 0.00 0.00 33.48 3.16
2574 2619 9.849166 ACGAGAACAAAAGAAAAAGAAACAATA 57.151 25.926 0.00 0.00 0.00 1.90
2575 2620 8.647226 CACGAGAACAAAAGAAAAAGAAACAAT 58.353 29.630 0.00 0.00 0.00 2.71
2813 2869 4.275689 CACTGTGCAATGGTAGAAACTTCA 59.724 41.667 0.00 0.00 0.00 3.02
2814 2870 4.275936 ACACTGTGCAATGGTAGAAACTTC 59.724 41.667 7.90 0.00 0.00 3.01
2821 2877 3.120199 GCAAGTACACTGTGCAATGGTAG 60.120 47.826 7.90 0.00 38.19 3.18
2916 2972 8.607459 CCTTGAAGAAACACATATAGCTGTTAG 58.393 37.037 0.00 0.00 30.26 2.34
2960 3017 4.439305 TTCGAAATCTGGAAAAGCATGG 57.561 40.909 0.00 0.00 0.00 3.66
3091 3148 1.196354 CACTTTGCTCTTGCTTCTCGG 59.804 52.381 0.00 0.00 40.48 4.63
3104 3161 2.816087 TCTTCTGAAGATGCCACTTTGC 59.184 45.455 15.82 0.00 31.20 3.68
3244 3301 2.669777 AAACTGTCGTCGGGGTTGGG 62.670 60.000 0.00 0.00 0.00 4.12
3252 3309 2.404215 AGGTTCATGAAACTGTCGTCG 58.596 47.619 25.10 0.00 36.90 5.12
3285 3342 4.899239 GCCTCACCGGATCGCTGG 62.899 72.222 9.46 2.18 46.62 4.85
3417 3474 4.435436 TGCTGTAGGCCGAGCGTG 62.435 66.667 16.63 0.58 40.92 5.34
3423 3480 2.185350 CCAGAGTGCTGTAGGCCG 59.815 66.667 0.00 0.00 40.63 6.13
3487 3544 2.624316 TTGTAGATGTCGTCGTCACC 57.376 50.000 4.72 0.00 32.46 4.02
3495 3552 0.930310 CACCGGCATTGTAGATGTCG 59.070 55.000 0.00 6.07 45.57 4.35
3528 3585 1.376543 AGTCCGAAGATGCAATGCTG 58.623 50.000 6.82 0.00 0.00 4.41
3549 3606 5.818887 TGATCCATCTGGTTCAAAGATTCA 58.181 37.500 7.39 0.00 40.04 2.57
3970 4027 2.155197 AAATGCTGTCACCCCCTCCC 62.155 60.000 0.00 0.00 0.00 4.30
3971 4028 0.967380 CAAATGCTGTCACCCCCTCC 60.967 60.000 0.00 0.00 0.00 4.30
3972 4029 0.251341 ACAAATGCTGTCACCCCCTC 60.251 55.000 0.00 0.00 29.87 4.30
3973 4030 1.072266 TACAAATGCTGTCACCCCCT 58.928 50.000 0.00 0.00 39.64 4.79
4042 4099 4.455533 TCAAATGGCAACTACAAGCTACAG 59.544 41.667 0.00 0.00 37.61 2.74
4076 4134 4.104383 ACATTTCCTGCTATACCCCATG 57.896 45.455 0.00 0.00 0.00 3.66
4077 4135 5.922960 TTACATTTCCTGCTATACCCCAT 57.077 39.130 0.00 0.00 0.00 4.00
4078 4136 5.922960 ATTACATTTCCTGCTATACCCCA 57.077 39.130 0.00 0.00 0.00 4.96
4133 4191 7.931407 ACAACAAAAGATTTTCCATCTTTACCC 59.069 33.333 9.65 0.00 44.77 3.69
4134 4192 8.887036 ACAACAAAAGATTTTCCATCTTTACC 57.113 30.769 9.65 0.00 44.77 2.85
4199 4257 7.255104 CCTTCACTTTACAATACTGAGCACAAA 60.255 37.037 0.00 0.00 0.00 2.83
4221 4279 0.329596 ATCACCCTGAAGTGGCCTTC 59.670 55.000 3.32 0.02 46.09 3.46
4223 4281 1.207791 CTATCACCCTGAAGTGGCCT 58.792 55.000 3.32 0.00 38.34 5.19
4245 4303 7.211966 AGAATAGCCATCATTTAGCAATGTC 57.788 36.000 0.00 0.00 40.78 3.06
4271 4329 2.383442 TATGCAGGGTAGAGGAGACC 57.617 55.000 0.00 0.00 36.12 3.85
4272 4330 3.773560 AGATATGCAGGGTAGAGGAGAC 58.226 50.000 0.00 0.00 0.00 3.36
4276 4334 3.805108 GCACAAGATATGCAGGGTAGAGG 60.805 52.174 0.00 0.00 42.88 3.69
4277 4335 3.070734 AGCACAAGATATGCAGGGTAGAG 59.929 47.826 0.00 0.00 45.92 2.43
4286 4344 4.024218 CCTTTAGCTGAGCACAAGATATGC 60.024 45.833 14.97 0.00 43.74 3.14
4313 4391 1.466950 TGGAAAAGCGCAGTATTTCGG 59.533 47.619 11.47 0.00 35.91 4.30
4360 4438 6.262273 TCGCTGAAGGAATTTAGTTTTGTTCT 59.738 34.615 0.00 0.00 0.00 3.01
4361 4439 6.435428 TCGCTGAAGGAATTTAGTTTTGTTC 58.565 36.000 0.00 0.00 0.00 3.18
4362 4440 6.385649 TCGCTGAAGGAATTTAGTTTTGTT 57.614 33.333 0.00 0.00 0.00 2.83
4363 4441 6.385649 TTCGCTGAAGGAATTTAGTTTTGT 57.614 33.333 0.00 0.00 0.00 2.83
4365 4443 9.788960 GATTATTCGCTGAAGGAATTTAGTTTT 57.211 29.630 0.00 0.00 35.78 2.43
4366 4444 9.178758 AGATTATTCGCTGAAGGAATTTAGTTT 57.821 29.630 0.00 0.00 35.78 2.66
4367 4445 8.616076 CAGATTATTCGCTGAAGGAATTTAGTT 58.384 33.333 0.00 0.00 35.78 2.24
4368 4446 7.770897 ACAGATTATTCGCTGAAGGAATTTAGT 59.229 33.333 0.00 0.00 35.78 2.24
4370 4448 8.506168 AACAGATTATTCGCTGAAGGAATTTA 57.494 30.769 0.00 0.00 35.78 1.40
4371 4449 7.396540 AACAGATTATTCGCTGAAGGAATTT 57.603 32.000 0.00 0.00 35.78 1.82
4372 4450 7.552687 TGTAACAGATTATTCGCTGAAGGAATT 59.447 33.333 0.00 0.00 35.78 2.17
4374 4452 6.403049 TGTAACAGATTATTCGCTGAAGGAA 58.597 36.000 0.00 0.00 36.07 3.36
4375 4453 5.972935 TGTAACAGATTATTCGCTGAAGGA 58.027 37.500 0.00 0.00 36.07 3.36
4376 4454 6.662414 TTGTAACAGATTATTCGCTGAAGG 57.338 37.500 0.00 0.00 36.07 3.46
4377 4455 7.518161 TGTTTGTAACAGATTATTCGCTGAAG 58.482 34.615 0.00 0.00 36.25 3.02
4378 4456 7.428282 TGTTTGTAACAGATTATTCGCTGAA 57.572 32.000 0.00 0.00 36.25 3.02
4379 4457 7.428282 TTGTTTGTAACAGATTATTCGCTGA 57.572 32.000 0.00 0.00 43.27 4.26
4380 4458 8.500837 TTTTGTTTGTAACAGATTATTCGCTG 57.499 30.769 0.00 0.00 43.27 5.18
4419 4497 9.768662 ATAGCTTCACAAAGAAATCATTTGTTT 57.231 25.926 0.00 0.00 46.04 2.83
4420 4498 9.768662 AATAGCTTCACAAAGAAATCATTTGTT 57.231 25.926 0.00 0.00 46.04 2.83
4427 4505 8.023128 TGCAGTAAATAGCTTCACAAAGAAATC 58.977 33.333 0.00 0.00 35.40 2.17
4435 4513 5.244755 TCATGTGCAGTAAATAGCTTCACA 58.755 37.500 0.00 0.95 42.31 3.58
4436 4514 5.801350 TCATGTGCAGTAAATAGCTTCAC 57.199 39.130 0.00 0.00 32.25 3.18
4456 4534 6.724441 TGAAGGTAATAGAGGAGACACTTTCA 59.276 38.462 0.00 0.00 31.97 2.69
4461 4539 8.669243 CAAATTTGAAGGTAATAGAGGAGACAC 58.331 37.037 13.08 0.00 0.00 3.67
4462 4540 8.602424 TCAAATTTGAAGGTAATAGAGGAGACA 58.398 33.333 18.45 0.00 33.55 3.41
4463 4541 9.449719 TTCAAATTTGAAGGTAATAGAGGAGAC 57.550 33.333 26.01 0.00 41.88 3.36
4544 4626 6.816640 AGCGTGATATAACACAACACAATAGT 59.183 34.615 12.93 0.00 40.34 2.12
4545 4627 7.119360 CAGCGTGATATAACACAACACAATAG 58.881 38.462 12.93 0.00 40.34 1.73
4546 4628 6.036626 CCAGCGTGATATAACACAACACAATA 59.963 38.462 12.93 0.00 40.34 1.90
4547 4629 5.163764 CCAGCGTGATATAACACAACACAAT 60.164 40.000 12.93 0.00 40.34 2.71
4548 4630 4.153296 CCAGCGTGATATAACACAACACAA 59.847 41.667 12.93 0.00 40.34 3.33
4549 4631 3.682377 CCAGCGTGATATAACACAACACA 59.318 43.478 12.93 0.00 40.34 3.72
4550 4632 3.682858 ACCAGCGTGATATAACACAACAC 59.317 43.478 12.93 0.00 40.34 3.32
4551 4633 3.682377 CACCAGCGTGATATAACACAACA 59.318 43.478 12.93 0.00 43.14 3.33
4552 4634 3.930229 TCACCAGCGTGATATAACACAAC 59.070 43.478 12.93 4.83 44.20 3.32
4574 4656 6.421485 AGGTGACATGAAGCAAAGATTATCT 58.579 36.000 0.00 0.00 0.00 1.98
4589 4671 4.256110 TGCAATGAAGAGTAGGTGACATG 58.744 43.478 0.00 0.00 0.00 3.21
4590 4672 4.558226 TGCAATGAAGAGTAGGTGACAT 57.442 40.909 0.00 0.00 0.00 3.06
4591 4673 4.350368 TTGCAATGAAGAGTAGGTGACA 57.650 40.909 0.00 0.00 0.00 3.58
4592 4674 6.985188 TTATTGCAATGAAGAGTAGGTGAC 57.015 37.500 22.27 0.00 0.00 3.67
4593 4675 6.094048 GCTTTATTGCAATGAAGAGTAGGTGA 59.906 38.462 35.29 6.84 34.87 4.02
4594 4676 6.094603 AGCTTTATTGCAATGAAGAGTAGGTG 59.905 38.462 35.29 16.17 34.87 4.00
4595 4677 6.183347 AGCTTTATTGCAATGAAGAGTAGGT 58.817 36.000 35.29 19.11 34.87 3.08
4596 4678 6.690194 AGCTTTATTGCAATGAAGAGTAGG 57.310 37.500 35.29 17.33 34.87 3.18
4597 4679 8.857216 CAAAAGCTTTATTGCAATGAAGAGTAG 58.143 33.333 35.29 21.03 34.87 2.57
4598 4680 7.814107 CCAAAAGCTTTATTGCAATGAAGAGTA 59.186 33.333 35.29 9.58 34.87 2.59
4599 4681 6.647895 CCAAAAGCTTTATTGCAATGAAGAGT 59.352 34.615 35.29 23.29 34.87 3.24
4600 4682 6.091713 CCCAAAAGCTTTATTGCAATGAAGAG 59.908 38.462 35.29 21.86 34.87 2.85
4601 4683 5.933463 CCCAAAAGCTTTATTGCAATGAAGA 59.067 36.000 35.29 11.32 34.87 2.87
4602 4684 5.122711 CCCCAAAAGCTTTATTGCAATGAAG 59.877 40.000 29.92 29.92 35.71 3.02
4603 4685 5.002516 CCCCAAAAGCTTTATTGCAATGAA 58.997 37.500 22.27 18.39 34.99 2.57
4604 4686 4.577875 CCCCAAAAGCTTTATTGCAATGA 58.422 39.130 22.27 11.34 34.99 2.57
4605 4687 3.127376 GCCCCAAAAGCTTTATTGCAATG 59.873 43.478 22.27 6.54 34.99 2.82
4606 4688 3.009363 AGCCCCAAAAGCTTTATTGCAAT 59.991 39.130 17.56 17.56 37.24 3.56
4607 4689 2.371510 AGCCCCAAAAGCTTTATTGCAA 59.628 40.909 13.10 0.00 37.24 4.08
4608 4690 1.977129 AGCCCCAAAAGCTTTATTGCA 59.023 42.857 13.10 0.00 37.24 4.08
4609 4691 2.028203 TCAGCCCCAAAAGCTTTATTGC 60.028 45.455 13.10 12.67 38.95 3.56
4610 4692 3.959535 TCAGCCCCAAAAGCTTTATTG 57.040 42.857 13.10 8.03 38.95 1.90
4611 4693 6.813293 AATATCAGCCCCAAAAGCTTTATT 57.187 33.333 13.10 1.47 38.95 1.40
4612 4694 7.069344 ACTAATATCAGCCCCAAAAGCTTTAT 58.931 34.615 13.10 2.07 38.95 1.40
4613 4695 6.431722 ACTAATATCAGCCCCAAAAGCTTTA 58.568 36.000 13.10 0.00 38.95 1.85
4614 4696 5.272402 ACTAATATCAGCCCCAAAAGCTTT 58.728 37.500 5.69 5.69 38.95 3.51
4615 4697 4.871822 ACTAATATCAGCCCCAAAAGCTT 58.128 39.130 0.00 0.00 38.95 3.74
4616 4698 4.526438 ACTAATATCAGCCCCAAAAGCT 57.474 40.909 0.00 0.00 42.70 3.74
4617 4699 4.519350 GGTACTAATATCAGCCCCAAAAGC 59.481 45.833 0.00 0.00 0.00 3.51
4618 4700 5.941788 AGGTACTAATATCAGCCCCAAAAG 58.058 41.667 0.00 0.00 36.02 2.27
4619 4701 5.987019 AGGTACTAATATCAGCCCCAAAA 57.013 39.130 0.00 0.00 36.02 2.44
4620 4702 5.987019 AAGGTACTAATATCAGCCCCAAA 57.013 39.130 0.00 0.00 38.49 3.28
4621 4703 6.183361 GGTTAAGGTACTAATATCAGCCCCAA 60.183 42.308 0.00 0.00 38.49 4.12
4622 4704 5.308759 GGTTAAGGTACTAATATCAGCCCCA 59.691 44.000 0.00 0.00 38.49 4.96
4623 4705 5.308759 TGGTTAAGGTACTAATATCAGCCCC 59.691 44.000 0.00 0.00 38.49 5.80
4624 4706 6.429521 TGGTTAAGGTACTAATATCAGCCC 57.570 41.667 0.00 0.00 38.49 5.19
4625 4707 6.465084 CCTGGTTAAGGTACTAATATCAGCC 58.535 44.000 0.00 0.00 41.74 4.85
4637 4719 8.574940 TCTTCCAAAAGTCTCCTGGTTAAGGTA 61.575 40.741 0.00 0.00 39.22 3.08
4638 4720 7.835500 TCTTCCAAAAGTCTCCTGGTTAAGGT 61.836 42.308 0.00 0.00 39.22 3.50
4639 4721 5.456186 TCTTCCAAAAGTCTCCTGGTTAAGG 60.456 44.000 0.00 0.00 39.39 2.69
4640 4722 5.470437 GTCTTCCAAAAGTCTCCTGGTTAAG 59.530 44.000 0.00 0.00 33.95 1.85
4641 4723 5.374071 GTCTTCCAAAAGTCTCCTGGTTAA 58.626 41.667 0.00 0.00 33.95 2.01
4642 4724 4.202430 GGTCTTCCAAAAGTCTCCTGGTTA 60.202 45.833 0.00 0.00 33.95 2.85
4643 4725 3.435169 GGTCTTCCAAAAGTCTCCTGGTT 60.435 47.826 0.00 0.00 33.95 3.67
4644 4726 2.106684 GGTCTTCCAAAAGTCTCCTGGT 59.893 50.000 0.00 0.00 33.95 4.00
4645 4727 2.784347 GGTCTTCCAAAAGTCTCCTGG 58.216 52.381 0.00 0.00 33.95 4.45
4646 4728 2.224305 ACGGTCTTCCAAAAGTCTCCTG 60.224 50.000 0.00 0.00 33.95 3.86
4647 4729 2.047830 ACGGTCTTCCAAAAGTCTCCT 58.952 47.619 0.00 0.00 33.95 3.69
4648 4730 2.143925 CACGGTCTTCCAAAAGTCTCC 58.856 52.381 0.00 0.00 33.95 3.71
4649 4731 3.060602 CTCACGGTCTTCCAAAAGTCTC 58.939 50.000 0.00 0.00 33.95 3.36
4650 4732 2.434702 ACTCACGGTCTTCCAAAAGTCT 59.565 45.455 0.00 0.00 33.95 3.24
4651 4733 2.835027 ACTCACGGTCTTCCAAAAGTC 58.165 47.619 0.00 0.00 33.95 3.01
4652 4734 3.203716 GAACTCACGGTCTTCCAAAAGT 58.796 45.455 0.00 0.00 33.95 2.66
4653 4735 3.002348 GTGAACTCACGGTCTTCCAAAAG 59.998 47.826 0.00 0.00 37.10 2.27
4654 4736 2.940410 GTGAACTCACGGTCTTCCAAAA 59.060 45.455 0.00 0.00 37.10 2.44
4655 4737 2.557317 GTGAACTCACGGTCTTCCAAA 58.443 47.619 0.00 0.00 37.10 3.28
4656 4738 2.234300 GTGAACTCACGGTCTTCCAA 57.766 50.000 0.00 0.00 37.10 3.53
4657 4739 3.980583 GTGAACTCACGGTCTTCCA 57.019 52.632 0.00 0.00 37.10 3.53
4666 4748 7.435192 CCTCAAACAAAAATAAGGTGAACTCAC 59.565 37.037 0.98 0.98 45.72 3.51
4667 4749 7.340743 TCCTCAAACAAAAATAAGGTGAACTCA 59.659 33.333 0.00 0.00 0.00 3.41
4668 4750 7.712797 TCCTCAAACAAAAATAAGGTGAACTC 58.287 34.615 0.00 0.00 0.00 3.01
4669 4751 7.654022 TCCTCAAACAAAAATAAGGTGAACT 57.346 32.000 0.00 0.00 0.00 3.01
4670 4752 8.887036 ATTCCTCAAACAAAAATAAGGTGAAC 57.113 30.769 0.00 0.00 0.00 3.18
4671 4753 9.323985 CAATTCCTCAAACAAAAATAAGGTGAA 57.676 29.630 0.00 0.00 0.00 3.18
4672 4754 7.930865 CCAATTCCTCAAACAAAAATAAGGTGA 59.069 33.333 0.00 0.00 0.00 4.02
4673 4755 7.307930 GCCAATTCCTCAAACAAAAATAAGGTG 60.308 37.037 0.00 0.00 0.00 4.00
4674 4756 6.710295 GCCAATTCCTCAAACAAAAATAAGGT 59.290 34.615 0.00 0.00 0.00 3.50
4675 4757 6.936335 AGCCAATTCCTCAAACAAAAATAAGG 59.064 34.615 0.00 0.00 0.00 2.69
4676 4758 7.656948 TCAGCCAATTCCTCAAACAAAAATAAG 59.343 33.333 0.00 0.00 0.00 1.73
4677 4759 7.504403 TCAGCCAATTCCTCAAACAAAAATAA 58.496 30.769 0.00 0.00 0.00 1.40
4678 4760 7.060383 TCAGCCAATTCCTCAAACAAAAATA 57.940 32.000 0.00 0.00 0.00 1.40
4679 4761 5.927819 TCAGCCAATTCCTCAAACAAAAAT 58.072 33.333 0.00 0.00 0.00 1.82
4680 4762 5.350504 TCAGCCAATTCCTCAAACAAAAA 57.649 34.783 0.00 0.00 0.00 1.94
4681 4763 5.549742 ATCAGCCAATTCCTCAAACAAAA 57.450 34.783 0.00 0.00 0.00 2.44
4682 4764 5.070180 TCAATCAGCCAATTCCTCAAACAAA 59.930 36.000 0.00 0.00 0.00 2.83
4683 4765 4.588106 TCAATCAGCCAATTCCTCAAACAA 59.412 37.500 0.00 0.00 0.00 2.83
4684 4766 4.151121 TCAATCAGCCAATTCCTCAAACA 58.849 39.130 0.00 0.00 0.00 2.83
4685 4767 4.741342 CTCAATCAGCCAATTCCTCAAAC 58.259 43.478 0.00 0.00 0.00 2.93
4686 4768 3.194116 GCTCAATCAGCCAATTCCTCAAA 59.806 43.478 0.00 0.00 43.17 2.69
4687 4769 2.756760 GCTCAATCAGCCAATTCCTCAA 59.243 45.455 0.00 0.00 43.17 3.02
4688 4770 2.372264 GCTCAATCAGCCAATTCCTCA 58.628 47.619 0.00 0.00 43.17 3.86
4699 4781 7.767659 TGCTTAATATATAGGCAGCTCAATCAG 59.232 37.037 9.88 0.00 0.00 2.90
4700 4782 7.623630 TGCTTAATATATAGGCAGCTCAATCA 58.376 34.615 9.88 0.00 0.00 2.57
4701 4783 7.226325 CCTGCTTAATATATAGGCAGCTCAATC 59.774 40.741 20.02 0.00 45.98 2.67
4702 4784 7.052873 CCTGCTTAATATATAGGCAGCTCAAT 58.947 38.462 20.02 0.00 45.98 2.57
4703 4785 6.213397 TCCTGCTTAATATATAGGCAGCTCAA 59.787 38.462 20.02 9.14 45.98 3.02
4704 4786 5.721480 TCCTGCTTAATATATAGGCAGCTCA 59.279 40.000 20.02 9.76 45.98 4.26
4705 4787 6.097554 TCTCCTGCTTAATATATAGGCAGCTC 59.902 42.308 20.02 0.00 45.98 4.09
4706 4788 5.960811 TCTCCTGCTTAATATATAGGCAGCT 59.039 40.000 20.02 0.00 45.98 4.24
4707 4789 6.227298 TCTCCTGCTTAATATATAGGCAGC 57.773 41.667 20.02 11.30 45.98 5.25
4708 4790 8.940952 GTTTTCTCCTGCTTAATATATAGGCAG 58.059 37.037 19.15 19.15 46.62 4.85
4709 4791 8.436778 TGTTTTCTCCTGCTTAATATATAGGCA 58.563 33.333 6.89 6.89 0.00 4.75
4710 4792 8.848474 TGTTTTCTCCTGCTTAATATATAGGC 57.152 34.615 0.00 0.00 0.00 3.93
4718 4800 9.476202 GTTTGTATTTGTTTTCTCCTGCTTAAT 57.524 29.630 0.00 0.00 0.00 1.40
4719 4801 8.470805 TGTTTGTATTTGTTTTCTCCTGCTTAA 58.529 29.630 0.00 0.00 0.00 1.85
4720 4802 8.001881 TGTTTGTATTTGTTTTCTCCTGCTTA 57.998 30.769 0.00 0.00 0.00 3.09
4721 4803 6.872920 TGTTTGTATTTGTTTTCTCCTGCTT 58.127 32.000 0.00 0.00 0.00 3.91
4722 4804 6.463995 TGTTTGTATTTGTTTTCTCCTGCT 57.536 33.333 0.00 0.00 0.00 4.24
4723 4805 6.366061 GGATGTTTGTATTTGTTTTCTCCTGC 59.634 38.462 0.00 0.00 0.00 4.85
4724 4806 7.661040 AGGATGTTTGTATTTGTTTTCTCCTG 58.339 34.615 0.00 0.00 0.00 3.86
4725 4807 7.839680 AGGATGTTTGTATTTGTTTTCTCCT 57.160 32.000 0.00 0.00 0.00 3.69
4726 4808 9.406828 GTAAGGATGTTTGTATTTGTTTTCTCC 57.593 33.333 0.00 0.00 0.00 3.71
4727 4809 9.959749 TGTAAGGATGTTTGTATTTGTTTTCTC 57.040 29.630 0.00 0.00 0.00 2.87
4766 4848 9.838339 CTCCAGAACTTGTACCTGATTAATTAT 57.162 33.333 0.00 0.00 0.00 1.28
4767 4849 9.042450 TCTCCAGAACTTGTACCTGATTAATTA 57.958 33.333 0.00 0.00 0.00 1.40
4768 4850 7.918076 TCTCCAGAACTTGTACCTGATTAATT 58.082 34.615 0.00 0.00 0.00 1.40
4769 4851 7.496346 TCTCCAGAACTTGTACCTGATTAAT 57.504 36.000 0.00 0.00 0.00 1.40
4770 4852 6.928348 TCTCCAGAACTTGTACCTGATTAA 57.072 37.500 0.00 0.00 0.00 1.40
4771 4853 6.928348 TTCTCCAGAACTTGTACCTGATTA 57.072 37.500 0.00 0.00 0.00 1.75
4772 4854 5.825593 TTCTCCAGAACTTGTACCTGATT 57.174 39.130 0.00 0.00 0.00 2.57
4773 4855 6.214412 AGAATTCTCCAGAACTTGTACCTGAT 59.786 38.462 0.88 0.00 36.80 2.90
4774 4856 5.544176 AGAATTCTCCAGAACTTGTACCTGA 59.456 40.000 0.88 0.00 36.80 3.86
4775 4857 5.641209 CAGAATTCTCCAGAACTTGTACCTG 59.359 44.000 4.57 0.00 36.80 4.00
4776 4858 5.544176 TCAGAATTCTCCAGAACTTGTACCT 59.456 40.000 4.57 0.00 36.80 3.08
4777 4859 5.794894 TCAGAATTCTCCAGAACTTGTACC 58.205 41.667 4.57 0.00 36.80 3.34
4778 4860 6.367422 CACTCAGAATTCTCCAGAACTTGTAC 59.633 42.308 15.18 0.00 36.80 2.90
4779 4861 6.042093 ACACTCAGAATTCTCCAGAACTTGTA 59.958 38.462 15.18 0.00 36.80 2.41
4780 4862 5.163258 ACACTCAGAATTCTCCAGAACTTGT 60.163 40.000 15.18 7.96 36.80 3.16
4781 4863 5.303971 ACACTCAGAATTCTCCAGAACTTG 58.696 41.667 15.18 7.47 36.80 3.16
4782 4864 5.070981 TGACACTCAGAATTCTCCAGAACTT 59.929 40.000 15.18 0.40 36.80 2.66
4783 4865 4.590647 TGACACTCAGAATTCTCCAGAACT 59.409 41.667 15.18 0.85 36.80 3.01
4784 4866 4.688413 GTGACACTCAGAATTCTCCAGAAC 59.312 45.833 15.18 8.09 36.80 3.01
4785 4867 4.590647 AGTGACACTCAGAATTCTCCAGAA 59.409 41.667 15.18 0.00 38.56 3.02
4786 4868 4.155709 AGTGACACTCAGAATTCTCCAGA 58.844 43.478 15.18 6.01 0.00 3.86
4787 4869 4.533919 AGTGACACTCAGAATTCTCCAG 57.466 45.455 4.57 7.17 0.00 3.86
4788 4870 5.567623 GCTTAGTGACACTCAGAATTCTCCA 60.568 44.000 18.90 0.00 0.00 3.86
4789 4871 4.867608 GCTTAGTGACACTCAGAATTCTCC 59.132 45.833 18.90 0.00 0.00 3.71
4790 4872 4.867608 GGCTTAGTGACACTCAGAATTCTC 59.132 45.833 18.90 2.01 0.00 2.87
4791 4873 4.284490 TGGCTTAGTGACACTCAGAATTCT 59.716 41.667 18.90 0.88 0.00 2.40
4792 4874 4.569943 TGGCTTAGTGACACTCAGAATTC 58.430 43.478 18.90 0.00 0.00 2.17
4793 4875 4.623932 TGGCTTAGTGACACTCAGAATT 57.376 40.909 18.90 0.00 0.00 2.17
4794 4876 4.623932 TTGGCTTAGTGACACTCAGAAT 57.376 40.909 18.90 0.00 30.21 2.40
4795 4877 4.040339 TCATTGGCTTAGTGACACTCAGAA 59.960 41.667 18.90 7.08 30.21 3.02
4796 4878 3.578282 TCATTGGCTTAGTGACACTCAGA 59.422 43.478 18.90 3.94 30.21 3.27
4797 4879 3.930336 TCATTGGCTTAGTGACACTCAG 58.070 45.455 12.39 12.01 30.21 3.35
4798 4880 4.350368 TTCATTGGCTTAGTGACACTCA 57.650 40.909 12.39 0.00 30.21 3.41
4799 4881 4.033358 CGATTCATTGGCTTAGTGACACTC 59.967 45.833 12.39 0.00 30.21 3.51
4800 4882 3.935203 CGATTCATTGGCTTAGTGACACT 59.065 43.478 13.68 13.68 30.21 3.55
4801 4883 3.932710 TCGATTCATTGGCTTAGTGACAC 59.067 43.478 0.00 0.00 30.21 3.67
4802 4884 4.200838 TCGATTCATTGGCTTAGTGACA 57.799 40.909 0.00 0.00 0.00 3.58
4803 4885 5.107298 GCTATCGATTCATTGGCTTAGTGAC 60.107 44.000 1.71 0.00 0.00 3.67
4804 4886 4.991056 GCTATCGATTCATTGGCTTAGTGA 59.009 41.667 1.71 0.00 0.00 3.41
4805 4887 4.751600 TGCTATCGATTCATTGGCTTAGTG 59.248 41.667 1.71 0.00 0.00 2.74
4806 4888 4.960938 TGCTATCGATTCATTGGCTTAGT 58.039 39.130 1.71 0.00 0.00 2.24
4807 4889 6.312487 CAATGCTATCGATTCATTGGCTTAG 58.688 40.000 27.78 10.93 41.80 2.18
4808 4890 6.245115 CAATGCTATCGATTCATTGGCTTA 57.755 37.500 27.78 2.28 41.80 3.09
4809 4891 5.117355 CAATGCTATCGATTCATTGGCTT 57.883 39.130 27.78 8.72 41.80 4.35
4810 4892 4.761235 CAATGCTATCGATTCATTGGCT 57.239 40.909 27.78 9.34 41.80 4.75
4827 4909 3.192001 AGCAAGACACTATGCAACCAATG 59.808 43.478 0.00 0.00 44.95 2.82
4828 4910 3.424703 AGCAAGACACTATGCAACCAAT 58.575 40.909 0.00 0.00 44.95 3.16
4829 4911 2.862541 AGCAAGACACTATGCAACCAA 58.137 42.857 0.00 0.00 44.95 3.67
4830 4912 2.553602 CAAGCAAGACACTATGCAACCA 59.446 45.455 0.00 0.00 44.95 3.67
4831 4913 2.813754 TCAAGCAAGACACTATGCAACC 59.186 45.455 0.00 0.00 44.95 3.77
4832 4914 4.154737 TGATCAAGCAAGACACTATGCAAC 59.845 41.667 0.00 0.00 44.95 4.17
4833 4915 4.325972 TGATCAAGCAAGACACTATGCAA 58.674 39.130 0.00 0.00 44.95 4.08
4834 4916 3.941573 TGATCAAGCAAGACACTATGCA 58.058 40.909 0.00 0.00 44.95 3.96
4835 4917 6.204301 ACATATGATCAAGCAAGACACTATGC 59.796 38.462 10.38 0.00 42.87 3.14
4836 4918 7.226128 ACACATATGATCAAGCAAGACACTATG 59.774 37.037 10.38 1.90 0.00 2.23
4837 4919 7.278135 ACACATATGATCAAGCAAGACACTAT 58.722 34.615 10.38 0.00 0.00 2.12
4838 4920 6.643388 ACACATATGATCAAGCAAGACACTA 58.357 36.000 10.38 0.00 0.00 2.74
4839 4921 5.494724 ACACATATGATCAAGCAAGACACT 58.505 37.500 10.38 0.00 0.00 3.55
4840 4922 5.808042 ACACATATGATCAAGCAAGACAC 57.192 39.130 10.38 0.00 0.00 3.67
4841 4923 5.525012 GCTACACATATGATCAAGCAAGACA 59.475 40.000 10.38 0.00 0.00 3.41
4842 4924 5.525012 TGCTACACATATGATCAAGCAAGAC 59.475 40.000 10.38 0.00 0.00 3.01
4843 4925 5.525012 GTGCTACACATATGATCAAGCAAGA 59.475 40.000 15.58 0.00 34.08 3.02
4844 4926 5.277683 GGTGCTACACATATGATCAAGCAAG 60.278 44.000 15.58 2.57 35.86 4.01
4845 4927 4.576053 GGTGCTACACATATGATCAAGCAA 59.424 41.667 15.58 0.91 35.86 3.91
4846 4928 4.129380 GGTGCTACACATATGATCAAGCA 58.871 43.478 10.38 14.64 35.86 3.91
4847 4929 4.384056 AGGTGCTACACATATGATCAAGC 58.616 43.478 10.38 12.38 35.86 4.01
4848 4930 4.683320 CGAGGTGCTACACATATGATCAAG 59.317 45.833 10.38 2.56 35.86 3.02
4849 4931 4.099419 ACGAGGTGCTACACATATGATCAA 59.901 41.667 10.38 0.00 35.86 2.57
4850 4932 3.636764 ACGAGGTGCTACACATATGATCA 59.363 43.478 10.38 0.00 35.86 2.92
4851 4933 4.022762 AGACGAGGTGCTACACATATGATC 60.023 45.833 10.38 0.00 35.86 2.92
4852 4934 3.891977 AGACGAGGTGCTACACATATGAT 59.108 43.478 10.38 0.00 35.86 2.45
4853 4935 3.288092 AGACGAGGTGCTACACATATGA 58.712 45.455 10.38 0.00 35.86 2.15
4854 4936 3.717400 AGACGAGGTGCTACACATATG 57.283 47.619 0.00 0.00 35.86 1.78
4855 4937 3.954904 AGAAGACGAGGTGCTACACATAT 59.045 43.478 0.00 0.00 35.86 1.78
4856 4938 3.353557 AGAAGACGAGGTGCTACACATA 58.646 45.455 0.00 0.00 35.86 2.29
4857 4939 2.171840 AGAAGACGAGGTGCTACACAT 58.828 47.619 0.00 0.00 35.86 3.21
4858 4940 1.617322 AGAAGACGAGGTGCTACACA 58.383 50.000 0.00 0.00 35.86 3.72
4859 4941 2.726832 AAGAAGACGAGGTGCTACAC 57.273 50.000 0.00 0.00 0.00 2.90
4860 4942 4.806330 CTTAAAGAAGACGAGGTGCTACA 58.194 43.478 0.00 0.00 34.25 2.74
4861 4943 3.613299 GCTTAAAGAAGACGAGGTGCTAC 59.387 47.826 0.00 0.00 34.25 3.58
4862 4944 3.257375 TGCTTAAAGAAGACGAGGTGCTA 59.743 43.478 0.00 0.00 34.25 3.49
4863 4945 2.037251 TGCTTAAAGAAGACGAGGTGCT 59.963 45.455 0.00 0.00 34.25 4.40
4864 4946 2.157863 GTGCTTAAAGAAGACGAGGTGC 59.842 50.000 0.00 0.00 34.25 5.01
4865 4947 3.654414 AGTGCTTAAAGAAGACGAGGTG 58.346 45.455 0.00 0.00 34.25 4.00
4866 4948 4.338379 AAGTGCTTAAAGAAGACGAGGT 57.662 40.909 0.00 0.00 34.25 3.85
4867 4949 4.991687 AGAAAGTGCTTAAAGAAGACGAGG 59.008 41.667 0.00 0.00 34.25 4.63
4868 4950 6.422400 AGAAGAAAGTGCTTAAAGAAGACGAG 59.578 38.462 0.00 0.00 34.25 4.18
4869 4951 6.281405 AGAAGAAAGTGCTTAAAGAAGACGA 58.719 36.000 0.00 0.00 34.25 4.20
4870 4952 6.201044 TGAGAAGAAAGTGCTTAAAGAAGACG 59.799 38.462 0.00 0.00 34.25 4.18
4871 4953 7.484035 TGAGAAGAAAGTGCTTAAAGAAGAC 57.516 36.000 0.00 0.00 34.25 3.01
4872 4954 8.506168 TTTGAGAAGAAAGTGCTTAAAGAAGA 57.494 30.769 0.00 0.00 34.25 2.87
4873 4955 9.573133 TTTTTGAGAAGAAAGTGCTTAAAGAAG 57.427 29.630 0.00 0.00 35.60 2.85
4874 4956 9.353999 GTTTTTGAGAAGAAAGTGCTTAAAGAA 57.646 29.630 0.00 0.00 0.00 2.52
4875 4957 8.739972 AGTTTTTGAGAAGAAAGTGCTTAAAGA 58.260 29.630 0.00 0.00 0.00 2.52
4876 4958 8.917415 AGTTTTTGAGAAGAAAGTGCTTAAAG 57.083 30.769 0.00 0.00 0.00 1.85
4877 4959 8.739972 AGAGTTTTTGAGAAGAAAGTGCTTAAA 58.260 29.630 0.00 0.00 0.00 1.52
4878 4960 8.281212 AGAGTTTTTGAGAAGAAAGTGCTTAA 57.719 30.769 0.00 0.00 0.00 1.85
4879 4961 7.865706 AGAGTTTTTGAGAAGAAAGTGCTTA 57.134 32.000 0.00 0.00 0.00 3.09
4880 4962 6.765915 AGAGTTTTTGAGAAGAAAGTGCTT 57.234 33.333 0.00 0.00 0.00 3.91
4881 4963 6.601217 AGAAGAGTTTTTGAGAAGAAAGTGCT 59.399 34.615 0.00 0.00 0.00 4.40
4882 4964 6.790282 AGAAGAGTTTTTGAGAAGAAAGTGC 58.210 36.000 0.00 0.00 0.00 4.40
4883 4965 8.207521 AGAGAAGAGTTTTTGAGAAGAAAGTG 57.792 34.615 0.00 0.00 0.00 3.16
4884 4966 8.800370 AAGAGAAGAGTTTTTGAGAAGAAAGT 57.200 30.769 0.00 0.00 0.00 2.66
4885 4967 8.341903 GGAAGAGAAGAGTTTTTGAGAAGAAAG 58.658 37.037 0.00 0.00 0.00 2.62
4886 4968 7.011482 CGGAAGAGAAGAGTTTTTGAGAAGAAA 59.989 37.037 0.00 0.00 0.00 2.52
4887 4969 6.480320 CGGAAGAGAAGAGTTTTTGAGAAGAA 59.520 38.462 0.00 0.00 0.00 2.52
4888 4970 5.986135 CGGAAGAGAAGAGTTTTTGAGAAGA 59.014 40.000 0.00 0.00 0.00 2.87
4889 4971 5.333721 GCGGAAGAGAAGAGTTTTTGAGAAG 60.334 44.000 0.00 0.00 0.00 2.85
4890 4972 4.511826 GCGGAAGAGAAGAGTTTTTGAGAA 59.488 41.667 0.00 0.00 0.00 2.87
4891 4973 4.058817 GCGGAAGAGAAGAGTTTTTGAGA 58.941 43.478 0.00 0.00 0.00 3.27
4892 4974 4.061596 AGCGGAAGAGAAGAGTTTTTGAG 58.938 43.478 0.00 0.00 0.00 3.02
4893 4975 4.073293 AGCGGAAGAGAAGAGTTTTTGA 57.927 40.909 0.00 0.00 0.00 2.69
4894 4976 6.487689 AATAGCGGAAGAGAAGAGTTTTTG 57.512 37.500 0.00 0.00 0.00 2.44
4895 4977 6.937465 AGAAATAGCGGAAGAGAAGAGTTTTT 59.063 34.615 0.00 0.00 0.00 1.94
4896 4978 6.370166 CAGAAATAGCGGAAGAGAAGAGTTTT 59.630 38.462 0.00 0.00 0.00 2.43
4897 4979 5.872070 CAGAAATAGCGGAAGAGAAGAGTTT 59.128 40.000 0.00 0.00 0.00 2.66
4898 4980 5.415221 CAGAAATAGCGGAAGAGAAGAGTT 58.585 41.667 0.00 0.00 0.00 3.01
4899 4981 4.142049 CCAGAAATAGCGGAAGAGAAGAGT 60.142 45.833 0.00 0.00 0.00 3.24
4900 4982 4.098654 TCCAGAAATAGCGGAAGAGAAGAG 59.901 45.833 0.00 0.00 0.00 2.85
4901 4983 4.023980 TCCAGAAATAGCGGAAGAGAAGA 58.976 43.478 0.00 0.00 0.00 2.87
4902 4984 4.392921 TCCAGAAATAGCGGAAGAGAAG 57.607 45.455 0.00 0.00 0.00 2.85
4903 4985 4.162320 ACATCCAGAAATAGCGGAAGAGAA 59.838 41.667 0.00 0.00 31.18 2.87
4904 4986 3.706594 ACATCCAGAAATAGCGGAAGAGA 59.293 43.478 0.00 0.00 31.18 3.10
4905 4987 4.065321 ACATCCAGAAATAGCGGAAGAG 57.935 45.455 0.00 0.00 31.18 2.85
4906 4988 4.442706 GAACATCCAGAAATAGCGGAAGA 58.557 43.478 0.00 0.00 31.18 2.87
4907 4989 3.561725 GGAACATCCAGAAATAGCGGAAG 59.438 47.826 0.00 0.00 36.28 3.46
4908 4990 3.054728 TGGAACATCCAGAAATAGCGGAA 60.055 43.478 0.00 0.00 42.67 4.30
4909 4991 2.503765 TGGAACATCCAGAAATAGCGGA 59.496 45.455 0.00 0.00 42.67 5.54
4910 4992 2.917933 TGGAACATCCAGAAATAGCGG 58.082 47.619 0.00 0.00 42.67 5.52
4921 5003 1.276989 TCTACACGGGTTGGAACATCC 59.723 52.381 0.00 0.00 46.85 3.51
4922 5004 2.754946 TCTACACGGGTTGGAACATC 57.245 50.000 0.00 0.00 39.30 3.06
4923 5005 2.355716 CCATCTACACGGGTTGGAACAT 60.356 50.000 0.00 0.00 39.30 2.71
4924 5006 1.002659 CCATCTACACGGGTTGGAACA 59.997 52.381 0.00 0.00 0.00 3.18
4925 5007 1.002773 ACCATCTACACGGGTTGGAAC 59.997 52.381 13.92 0.00 0.00 3.62
4926 5008 1.354101 ACCATCTACACGGGTTGGAA 58.646 50.000 13.92 0.00 0.00 3.53
4927 5009 1.354101 AACCATCTACACGGGTTGGA 58.646 50.000 13.92 4.85 43.01 3.53
4928 5010 3.948735 AACCATCTACACGGGTTGG 57.051 52.632 5.44 5.44 43.01 3.77
4930 5012 3.167485 TCTACAACCATCTACACGGGTT 58.833 45.455 0.00 0.00 45.42 4.11
4931 5013 2.758979 CTCTACAACCATCTACACGGGT 59.241 50.000 0.00 0.00 36.19 5.28
4932 5014 3.021695 TCTCTACAACCATCTACACGGG 58.978 50.000 0.00 0.00 0.00 5.28
4933 5015 3.181489 GGTCTCTACAACCATCTACACGG 60.181 52.174 0.00 0.00 36.75 4.94
4934 5016 3.487042 CGGTCTCTACAACCATCTACACG 60.487 52.174 0.00 0.00 36.53 4.49
4935 5017 3.734293 GCGGTCTCTACAACCATCTACAC 60.734 52.174 0.00 0.00 36.53 2.90
4936 5018 2.426024 GCGGTCTCTACAACCATCTACA 59.574 50.000 0.00 0.00 36.53 2.74
4937 5019 2.223758 GGCGGTCTCTACAACCATCTAC 60.224 54.545 0.00 0.00 36.53 2.59
4938 5020 2.029623 GGCGGTCTCTACAACCATCTA 58.970 52.381 0.00 0.00 36.53 1.98
4939 5021 0.824759 GGCGGTCTCTACAACCATCT 59.175 55.000 0.00 0.00 36.53 2.90
4940 5022 0.535335 TGGCGGTCTCTACAACCATC 59.465 55.000 0.00 0.00 36.53 3.51
4941 5023 1.134401 CATGGCGGTCTCTACAACCAT 60.134 52.381 0.00 0.00 41.21 3.55
4942 5024 0.249120 CATGGCGGTCTCTACAACCA 59.751 55.000 0.00 0.00 36.53 3.67
4943 5025 0.462047 CCATGGCGGTCTCTACAACC 60.462 60.000 0.00 0.00 0.00 3.77
4944 5026 1.090052 GCCATGGCGGTCTCTACAAC 61.090 60.000 23.48 0.00 36.97 3.32
4945 5027 1.220749 GCCATGGCGGTCTCTACAA 59.779 57.895 23.48 0.00 36.97 2.41
4946 5028 2.900273 GCCATGGCGGTCTCTACA 59.100 61.111 23.48 0.00 36.97 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.