Multiple sequence alignment - TraesCS5B01G001800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G001800 chr5B 100.000 5970 0 0 1 5970 2580312 2586281 0.000000e+00 11025.0
1 TraesCS5B01G001800 chr5B 82.653 392 61 5 2163 2548 3920248 3919858 2.060000e-89 340.0
2 TraesCS5B01G001800 chr5B 80.749 374 65 6 3787 4157 3918980 3918611 9.790000e-73 285.0
3 TraesCS5B01G001800 chr5B 89.908 218 14 6 1017 1233 3923086 3922876 2.120000e-69 274.0
4 TraesCS5B01G001800 chr5B 81.306 337 43 10 189 522 509822042 509822361 7.680000e-64 255.0
5 TraesCS5B01G001800 chr5B 87.864 206 19 3 3212 3416 3919212 3919012 2.780000e-58 237.0
6 TraesCS5B01G001800 chr5B 97.710 131 3 0 1336 1466 599689181 599689051 6.020000e-55 226.0
7 TraesCS5B01G001800 chr5B 89.385 179 17 2 2628 2804 3919712 3919534 2.170000e-54 224.0
8 TraesCS5B01G001800 chr5B 84.862 218 32 1 4381 4598 3918332 3918116 1.010000e-52 219.0
9 TraesCS5B01G001800 chr5B 81.659 229 29 5 1839 2063 3920916 3920697 1.710000e-40 178.0
10 TraesCS5B01G001800 chr5B 84.516 155 24 0 4685 4839 3918046 3917892 2.880000e-33 154.0
11 TraesCS5B01G001800 chr5D 90.208 3758 290 44 1464 5170 2685158 2688888 0.000000e+00 4830.0
12 TraesCS5B01G001800 chr5D 85.901 2986 364 45 2219 5170 2693572 2696534 0.000000e+00 3129.0
13 TraesCS5B01G001800 chr5D 86.702 752 82 13 5231 5969 2788706 2789452 0.000000e+00 819.0
14 TraesCS5B01G001800 chr5D 91.203 557 24 14 781 1315 2684591 2685144 0.000000e+00 734.0
15 TraesCS5B01G001800 chr5D 79.377 1091 176 39 2636 3695 2697793 2698865 0.000000e+00 723.0
16 TraesCS5B01G001800 chr5D 83.271 807 99 21 2624 3417 2139597 2140380 0.000000e+00 710.0
17 TraesCS5B01G001800 chr5D 87.608 347 24 4 189 522 2683847 2684187 9.390000e-103 385.0
18 TraesCS5B01G001800 chr5D 90.090 222 12 8 1024 1242 2136036 2136250 4.560000e-71 279.0
19 TraesCS5B01G001800 chr5D 89.855 207 18 3 1028 1234 2691961 2692164 4.590000e-66 263.0
20 TraesCS5B01G001800 chr5D 96.875 128 4 0 2 129 37189324 37189197 1.300000e-51 215.0
21 TraesCS5B01G001800 chr5D 88.312 154 17 1 1846 1999 2692673 2692825 3.670000e-42 183.0
22 TraesCS5B01G001800 chr5D 90.000 140 14 0 4685 4824 2141304 2141443 1.320000e-41 182.0
23 TraesCS5B01G001800 chr5D 83.429 175 17 7 555 727 2684296 2684460 1.040000e-32 152.0
24 TraesCS5B01G001800 chr5D 97.436 39 0 1 523 560 2684244 2684282 1.390000e-06 65.8
25 TraesCS5B01G001800 chr5A 89.663 2109 160 33 1488 3557 2085670 2083581 0.000000e+00 2634.0
26 TraesCS5B01G001800 chr5A 84.173 2123 297 33 3072 5170 1949320 1947213 0.000000e+00 2023.0
27 TraesCS5B01G001800 chr5A 92.277 1269 89 8 3565 4828 2083494 2082230 0.000000e+00 1792.0
28 TraesCS5B01G001800 chr5A 89.211 862 88 3 2189 3045 1950606 1949745 0.000000e+00 1072.0
29 TraesCS5B01G001800 chr5A 83.024 807 99 23 2624 3417 1224221 1225002 0.000000e+00 697.0
30 TraesCS5B01G001800 chr5A 84.827 692 79 20 5287 5969 1903604 1902930 0.000000e+00 673.0
31 TraesCS5B01G001800 chr5A 87.643 526 41 15 782 1296 2086297 2085785 1.850000e-164 590.0
32 TraesCS5B01G001800 chr5A 88.776 294 24 3 4885 5170 2082211 2081919 9.520000e-93 351.0
33 TraesCS5B01G001800 chr5A 90.045 221 10 10 1024 1242 1218980 1219190 5.890000e-70 276.0
34 TraesCS5B01G001800 chr5A 84.615 273 32 6 1028 1296 1952542 1952276 4.590000e-66 263.0
35 TraesCS5B01G001800 chr5A 84.889 225 32 2 1839 2062 1951703 1951480 6.020000e-55 226.0
36 TraesCS5B01G001800 chr5A 83.929 224 27 6 1839 2062 1221123 1221337 7.840000e-49 206.0
37 TraesCS5B01G001800 chr5A 88.806 134 15 0 4685 4818 1225944 1226077 1.330000e-36 165.0
38 TraesCS5B01G001800 chr5A 95.652 46 2 0 480 525 2086864 2086819 2.310000e-09 75.0
39 TraesCS5B01G001800 chr4B 99.242 132 1 0 1331 1462 581163077 581163208 7.730000e-59 239.0
40 TraesCS5B01G001800 chr4B 99.231 130 1 0 1336 1465 237908076 237908205 1.000000e-57 235.0
41 TraesCS5B01G001800 chr4B 97.674 129 3 0 1 129 398790184 398790312 7.790000e-54 222.0
42 TraesCS5B01G001800 chr4B 87.500 72 7 2 5164 5234 48407243 48407313 1.380000e-11 82.4
43 TraesCS5B01G001800 chr4B 87.500 72 7 2 5164 5234 48428248 48428318 1.380000e-11 82.4
44 TraesCS5B01G001800 chr1B 99.237 131 0 1 1336 1466 62060256 62060385 1.000000e-57 235.0
45 TraesCS5B01G001800 chr1A 100.000 127 0 0 1336 1462 23442177 23442051 1.000000e-57 235.0
46 TraesCS5B01G001800 chr7D 99.219 128 1 0 2 129 392257536 392257663 1.290000e-56 231.0
47 TraesCS5B01G001800 chr7D 95.312 128 6 0 2 129 517335606 517335733 2.820000e-48 204.0
48 TraesCS5B01G001800 chr2B 98.450 129 2 0 1336 1464 297259538 297259666 1.670000e-55 228.0
49 TraesCS5B01G001800 chr2B 94.406 143 7 1 1334 1476 173442852 173442711 1.010000e-52 219.0
50 TraesCS5B01G001800 chr2B 95.349 129 5 1 1 129 566645791 566645918 2.820000e-48 204.0
51 TraesCS5B01G001800 chr4D 97.656 128 3 0 2 129 14942046 14941919 2.800000e-53 220.0
52 TraesCS5B01G001800 chr4A 97.674 129 2 1 1 129 36371022 36371149 2.800000e-53 220.0
53 TraesCS5B01G001800 chr2D 97.656 128 3 0 2 129 135316976 135317103 2.800000e-53 220.0
54 TraesCS5B01G001800 chr2D 95.556 135 6 0 1328 1462 622315650 622315784 3.620000e-52 217.0
55 TraesCS5B01G001800 chr7A 95.556 135 6 0 1336 1470 821625 821491 3.620000e-52 217.0
56 TraesCS5B01G001800 chr7A 87.143 70 9 0 5164 5233 432628662 432628731 4.960000e-11 80.5
57 TraesCS5B01G001800 chr7A 91.489 47 4 0 5103 5149 506299405 506299451 1.390000e-06 65.8
58 TraesCS5B01G001800 chr2A 96.124 129 4 1 1 129 70056862 70056735 6.060000e-50 209.0
59 TraesCS5B01G001800 chr2A 90.625 64 6 0 5170 5233 277285919 277285856 1.070000e-12 86.1
60 TraesCS5B01G001800 chr2A 89.394 66 7 0 5168 5233 325239540 325239605 3.830000e-12 84.2
61 TraesCS5B01G001800 chr2A 87.143 70 9 0 5164 5233 325268189 325268258 4.960000e-11 80.5
62 TraesCS5B01G001800 chr2A 82.955 88 10 4 5148 5233 656516253 656516169 2.310000e-09 75.0
63 TraesCS5B01G001800 chr3B 87.037 108 12 2 1387 1493 40171339 40171445 2.920000e-23 121.0
64 TraesCS5B01G001800 chr3A 89.231 65 7 0 5169 5233 588282153 588282089 1.380000e-11 82.4
65 TraesCS5B01G001800 chr3A 86.957 69 9 0 5165 5233 23584479 23584411 1.780000e-10 78.7
66 TraesCS5B01G001800 chr1D 100.000 28 0 0 485 512 312510710 312510683 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G001800 chr5B 2580312 2586281 5969 False 11025.000000 11025 100.000000 1 5970 1 chr5B.!!$F1 5969
1 TraesCS5B01G001800 chr5B 3917892 3923086 5194 True 238.875000 340 85.199500 1017 4839 8 chr5B.!!$R2 3822
2 TraesCS5B01G001800 chr5D 2683847 2698865 15018 False 1162.755556 4830 88.147667 189 5170 9 chr5D.!!$F3 4981
3 TraesCS5B01G001800 chr5D 2788706 2789452 746 False 819.000000 819 86.702000 5231 5969 1 chr5D.!!$F1 738
4 TraesCS5B01G001800 chr5D 2136036 2141443 5407 False 390.333333 710 87.787000 1024 4824 3 chr5D.!!$F2 3800
5 TraesCS5B01G001800 chr5A 2081919 2086864 4945 True 1088.400000 2634 90.802200 480 5170 5 chr5A.!!$R3 4690
6 TraesCS5B01G001800 chr5A 1947213 1952542 5329 True 896.000000 2023 85.722000 1028 5170 4 chr5A.!!$R2 4142
7 TraesCS5B01G001800 chr5A 1902930 1903604 674 True 673.000000 673 84.827000 5287 5969 1 chr5A.!!$R1 682
8 TraesCS5B01G001800 chr5A 1218980 1226077 7097 False 336.000000 697 86.451000 1024 4818 4 chr5A.!!$F1 3794

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.036732 TTGAGCTGCTCCGTGGAAAT 59.963 50.0 25.61 0.00 0.00 2.17 F
1350 3290 0.329261 TTTCTACTCCCTCCGTCCGA 59.671 55.0 0.00 0.00 0.00 4.55 F
1458 3398 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
1460 3400 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.00 46.06 3.85 F
1461 3401 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.00 46.06 2.59 F
1462 3402 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.0 13.64 0.00 46.06 2.12 F
2948 8711 0.676466 TTATGCTTGACCCTGTGCCG 60.676 55.0 0.00 0.00 0.00 5.69 F
3495 9665 0.175073 ATAGCCCAGGAAACGTCGAC 59.825 55.0 5.18 5.18 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1439 3379 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
2158 5513 3.082548 GGGAGAAAGAGGGTTTTAGTGC 58.917 50.000 0.00 0.0 0.00 4.40 R
3431 9601 2.421424 AGAAAGATTGCACATTCGGAGC 59.579 45.455 0.00 0.0 0.00 4.70 R
3459 9629 7.117667 CCTGGGCTATTTTGAATTAACAACAAC 59.882 37.037 0.00 0.0 0.00 3.32 R
3465 9635 6.530181 CGTTTCCTGGGCTATTTTGAATTAAC 59.470 38.462 0.00 0.0 0.00 2.01 R
3475 9645 0.899720 TCGACGTTTCCTGGGCTATT 59.100 50.000 0.00 0.0 0.00 1.73 R
4413 10785 0.110104 AGTTGCTCCTTGCTGCTCTT 59.890 50.000 0.00 0.0 43.37 2.85 R
5489 12629 0.419459 ATGAGTGGAGGAGGGGAAGT 59.581 55.000 0.00 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.466124 CCCTGTTCGGAATCTCTCCC 59.534 60.000 0.00 0.00 41.87 4.30
20 21 0.103208 CCTGTTCGGAATCTCTCCCG 59.897 60.000 0.00 0.00 46.57 5.14
21 22 0.818296 CTGTTCGGAATCTCTCCCGT 59.182 55.000 0.00 0.00 45.48 5.28
22 23 0.815734 TGTTCGGAATCTCTCCCGTC 59.184 55.000 0.00 0.00 45.48 4.79
23 24 0.102663 GTTCGGAATCTCTCCCGTCC 59.897 60.000 0.00 0.00 45.48 4.79
24 25 2.722487 CGGAATCTCTCCCGTCCG 59.278 66.667 0.00 0.00 46.23 4.79
25 26 2.417936 GGAATCTCTCCCGTCCGC 59.582 66.667 0.00 0.00 38.44 5.54
26 27 2.128507 GGAATCTCTCCCGTCCGCT 61.129 63.158 0.00 0.00 38.44 5.52
27 28 1.360911 GAATCTCTCCCGTCCGCTC 59.639 63.158 0.00 0.00 0.00 5.03
28 29 2.077821 GAATCTCTCCCGTCCGCTCC 62.078 65.000 0.00 0.00 0.00 4.70
29 30 2.856039 AATCTCTCCCGTCCGCTCCA 62.856 60.000 0.00 0.00 0.00 3.86
30 31 3.827898 CTCTCCCGTCCGCTCCAC 61.828 72.222 0.00 0.00 0.00 4.02
31 32 4.361971 TCTCCCGTCCGCTCCACT 62.362 66.667 0.00 0.00 0.00 4.00
32 33 3.827898 CTCCCGTCCGCTCCACTC 61.828 72.222 0.00 0.00 0.00 3.51
57 58 4.606071 CTCCAGGAGCTCGGTTTG 57.394 61.111 7.83 3.56 0.00 2.93
58 59 1.975327 CTCCAGGAGCTCGGTTTGA 59.025 57.895 7.83 0.00 0.00 2.69
66 67 3.882025 CTCGGTTTGAGCTGCTCC 58.118 61.111 25.61 10.90 38.03 4.70
67 68 2.048222 TCGGTTTGAGCTGCTCCG 60.048 61.111 25.61 21.69 42.12 4.63
68 69 2.357517 CGGTTTGAGCTGCTCCGT 60.358 61.111 25.61 0.00 36.99 4.69
69 70 2.671177 CGGTTTGAGCTGCTCCGTG 61.671 63.158 25.61 8.39 36.99 4.94
70 71 2.328099 GGTTTGAGCTGCTCCGTGG 61.328 63.158 25.61 0.00 0.00 4.94
71 72 1.301716 GTTTGAGCTGCTCCGTGGA 60.302 57.895 25.61 4.83 0.00 4.02
72 73 0.884704 GTTTGAGCTGCTCCGTGGAA 60.885 55.000 25.61 10.89 0.00 3.53
73 74 0.179032 TTTGAGCTGCTCCGTGGAAA 60.179 50.000 25.61 15.95 0.00 3.13
74 75 0.036732 TTGAGCTGCTCCGTGGAAAT 59.963 50.000 25.61 0.00 0.00 2.17
75 76 0.901827 TGAGCTGCTCCGTGGAAATA 59.098 50.000 25.61 1.79 0.00 1.40
76 77 1.277842 TGAGCTGCTCCGTGGAAATAA 59.722 47.619 25.61 1.03 0.00 1.40
77 78 1.936547 GAGCTGCTCCGTGGAAATAAG 59.063 52.381 18.80 0.00 0.00 1.73
78 79 0.378610 GCTGCTCCGTGGAAATAAGC 59.621 55.000 0.00 0.00 0.00 3.09
79 80 2.014068 GCTGCTCCGTGGAAATAAGCT 61.014 52.381 0.00 0.00 34.11 3.74
80 81 1.667724 CTGCTCCGTGGAAATAAGCTG 59.332 52.381 0.00 0.00 34.11 4.24
81 82 0.378610 GCTCCGTGGAAATAAGCTGC 59.621 55.000 0.00 0.00 0.00 5.25
82 83 1.737838 CTCCGTGGAAATAAGCTGCA 58.262 50.000 1.02 0.00 0.00 4.41
83 84 1.667724 CTCCGTGGAAATAAGCTGCAG 59.332 52.381 10.11 10.11 0.00 4.41
84 85 1.003118 TCCGTGGAAATAAGCTGCAGT 59.997 47.619 16.64 0.00 0.00 4.40
85 86 1.812571 CCGTGGAAATAAGCTGCAGTT 59.187 47.619 16.64 6.37 0.00 3.16
86 87 2.228822 CCGTGGAAATAAGCTGCAGTTT 59.771 45.455 20.07 20.07 0.00 2.66
87 88 3.492313 CGTGGAAATAAGCTGCAGTTTC 58.508 45.455 19.79 17.32 0.00 2.78
88 89 3.670627 CGTGGAAATAAGCTGCAGTTTCC 60.671 47.826 27.60 27.60 46.15 3.13
89 90 3.507622 GTGGAAATAAGCTGCAGTTTCCT 59.492 43.478 31.04 16.35 46.13 3.36
90 91 3.758554 TGGAAATAAGCTGCAGTTTCCTC 59.241 43.478 31.04 21.04 46.13 3.71
91 92 3.129462 GGAAATAAGCTGCAGTTTCCTCC 59.871 47.826 27.28 22.17 43.85 4.30
92 93 2.029838 ATAAGCTGCAGTTTCCTCCG 57.970 50.000 19.79 0.00 0.00 4.63
93 94 0.673644 TAAGCTGCAGTTTCCTCCGC 60.674 55.000 19.79 0.00 0.00 5.54
94 95 2.359230 GCTGCAGTTTCCTCCGCT 60.359 61.111 16.64 0.00 0.00 5.52
95 96 2.394563 GCTGCAGTTTCCTCCGCTC 61.395 63.158 16.64 0.00 0.00 5.03
96 97 1.294780 CTGCAGTTTCCTCCGCTCT 59.705 57.895 5.25 0.00 0.00 4.09
97 98 1.004560 TGCAGTTTCCTCCGCTCTG 60.005 57.895 0.00 0.00 0.00 3.35
98 99 1.743252 GCAGTTTCCTCCGCTCTGG 60.743 63.158 0.00 0.00 40.09 3.86
99 100 1.078848 CAGTTTCCTCCGCTCTGGG 60.079 63.158 0.00 0.00 38.76 4.45
100 101 1.229209 AGTTTCCTCCGCTCTGGGA 60.229 57.895 0.00 0.00 38.76 4.37
109 110 2.809010 GCTCTGGGAGCGTAGTCC 59.191 66.667 3.74 0.00 45.85 3.85
110 111 2.052690 GCTCTGGGAGCGTAGTCCA 61.053 63.158 3.74 0.00 45.85 4.02
111 112 2.010582 GCTCTGGGAGCGTAGTCCAG 62.011 65.000 3.74 0.00 45.85 3.86
112 113 1.379977 TCTGGGAGCGTAGTCCAGG 60.380 63.158 8.50 0.00 45.89 4.45
113 114 2.363795 TGGGAGCGTAGTCCAGGG 60.364 66.667 3.47 0.00 38.52 4.45
114 115 2.043248 GGGAGCGTAGTCCAGGGA 60.043 66.667 3.47 0.00 38.52 4.20
115 116 2.128507 GGGAGCGTAGTCCAGGGAG 61.129 68.421 3.47 0.00 38.52 4.30
116 117 2.787567 GGAGCGTAGTCCAGGGAGC 61.788 68.421 0.00 0.00 36.51 4.70
117 118 3.127352 GAGCGTAGTCCAGGGAGCG 62.127 68.421 0.00 0.00 0.00 5.03
118 119 4.208686 GCGTAGTCCAGGGAGCGG 62.209 72.222 8.32 0.00 0.00 5.52
119 120 2.439701 CGTAGTCCAGGGAGCGGA 60.440 66.667 0.00 0.00 0.00 5.54
120 121 2.482333 CGTAGTCCAGGGAGCGGAG 61.482 68.421 0.00 0.00 31.65 4.63
121 122 1.076923 GTAGTCCAGGGAGCGGAGA 60.077 63.158 0.00 0.00 31.65 3.71
122 123 1.104577 GTAGTCCAGGGAGCGGAGAG 61.105 65.000 0.00 0.00 31.65 3.20
123 124 2.285889 TAGTCCAGGGAGCGGAGAGG 62.286 65.000 0.00 0.00 31.65 3.69
124 125 3.347590 TCCAGGGAGCGGAGAGGA 61.348 66.667 0.00 0.00 0.00 3.71
125 126 2.364317 CCAGGGAGCGGAGAGGAA 60.364 66.667 0.00 0.00 0.00 3.36
126 127 2.726351 CCAGGGAGCGGAGAGGAAC 61.726 68.421 0.00 0.00 0.00 3.62
127 128 2.364448 AGGGAGCGGAGAGGAACC 60.364 66.667 0.00 0.00 0.00 3.62
133 134 3.998156 CGGAGAGGAACCGTGAGA 58.002 61.111 0.00 0.00 44.57 3.27
134 135 1.803943 CGGAGAGGAACCGTGAGAG 59.196 63.158 0.00 0.00 44.57 3.20
135 136 1.513622 GGAGAGGAACCGTGAGAGC 59.486 63.158 0.00 0.00 0.00 4.09
136 137 1.513622 GAGAGGAACCGTGAGAGCC 59.486 63.158 0.00 0.00 0.00 4.70
137 138 0.968393 GAGAGGAACCGTGAGAGCCT 60.968 60.000 0.00 0.00 0.00 4.58
138 139 0.968393 AGAGGAACCGTGAGAGCCTC 60.968 60.000 0.00 0.00 44.24 4.70
139 140 1.950973 GAGGAACCGTGAGAGCCTCC 61.951 65.000 0.00 0.00 39.33 4.30
140 141 2.579738 GAACCGTGAGAGCCTCCC 59.420 66.667 0.00 0.00 0.00 4.30
141 142 2.203788 AACCGTGAGAGCCTCCCA 60.204 61.111 0.00 0.00 0.00 4.37
142 143 2.508586 GAACCGTGAGAGCCTCCCAC 62.509 65.000 0.00 0.00 0.00 4.61
143 144 3.775654 CCGTGAGAGCCTCCCACC 61.776 72.222 0.34 0.00 0.00 4.61
144 145 3.775654 CGTGAGAGCCTCCCACCC 61.776 72.222 0.34 0.00 0.00 4.61
145 146 3.403558 GTGAGAGCCTCCCACCCC 61.404 72.222 0.00 0.00 0.00 4.95
146 147 3.940480 TGAGAGCCTCCCACCCCA 61.940 66.667 0.00 0.00 0.00 4.96
147 148 2.610859 GAGAGCCTCCCACCCCAA 60.611 66.667 0.00 0.00 0.00 4.12
148 149 2.612115 AGAGCCTCCCACCCCAAG 60.612 66.667 0.00 0.00 0.00 3.61
149 150 2.936032 GAGCCTCCCACCCCAAGT 60.936 66.667 0.00 0.00 0.00 3.16
150 151 1.615424 GAGCCTCCCACCCCAAGTA 60.615 63.158 0.00 0.00 0.00 2.24
151 152 1.911702 GAGCCTCCCACCCCAAGTAC 61.912 65.000 0.00 0.00 0.00 2.73
152 153 2.987125 CCTCCCACCCCAAGTACG 59.013 66.667 0.00 0.00 0.00 3.67
153 154 2.666098 CCTCCCACCCCAAGTACGG 61.666 68.421 0.00 0.00 0.00 4.02
154 155 2.608368 TCCCACCCCAAGTACGGG 60.608 66.667 2.95 2.95 46.94 5.28
155 156 4.419921 CCCACCCCAAGTACGGGC 62.420 72.222 4.34 0.00 45.90 6.13
156 157 3.642503 CCACCCCAAGTACGGGCA 61.643 66.667 4.34 0.00 45.90 5.36
157 158 2.046314 CACCCCAAGTACGGGCAG 60.046 66.667 4.34 0.06 45.90 4.85
158 159 3.327404 ACCCCAAGTACGGGCAGG 61.327 66.667 4.34 3.03 45.90 4.85
159 160 4.109675 CCCCAAGTACGGGCAGGG 62.110 72.222 0.36 2.82 45.90 4.45
160 161 4.109675 CCCAAGTACGGGCAGGGG 62.110 72.222 1.42 0.00 40.07 4.79
161 162 3.327404 CCAAGTACGGGCAGGGGT 61.327 66.667 0.00 0.00 0.00 4.95
162 163 2.046314 CAAGTACGGGCAGGGGTG 60.046 66.667 0.00 0.00 0.00 4.61
163 164 4.029809 AAGTACGGGCAGGGGTGC 62.030 66.667 0.00 0.00 0.00 5.01
421 435 6.581166 CGCAACCTCCTAAAATTTAAAGACAC 59.419 38.462 0.00 0.00 0.00 3.67
433 447 5.734855 TTTAAAGACACTGTCAGAAGCAC 57.265 39.130 11.80 0.00 34.60 4.40
445 459 0.667792 AGAAGCACGCCGAGAAAGAC 60.668 55.000 0.00 0.00 0.00 3.01
447 461 2.357034 GCACGCCGAGAAAGACCA 60.357 61.111 0.00 0.00 0.00 4.02
450 464 1.156736 CACGCCGAGAAAGACCATTT 58.843 50.000 0.00 0.00 0.00 2.32
463 477 7.405292 AGAAAGACCATTTGATAACCATCTCA 58.595 34.615 0.00 0.00 31.93 3.27
471 485 9.293404 CCATTTGATAACCATCTCATTACATCT 57.707 33.333 0.00 0.00 31.93 2.90
474 488 7.734924 TGATAACCATCTCATTACATCTTGC 57.265 36.000 0.00 0.00 31.93 4.01
475 489 7.512130 TGATAACCATCTCATTACATCTTGCT 58.488 34.615 0.00 0.00 31.93 3.91
476 490 8.650490 TGATAACCATCTCATTACATCTTGCTA 58.350 33.333 0.00 0.00 31.93 3.49
477 491 9.664332 GATAACCATCTCATTACATCTTGCTAT 57.336 33.333 0.00 0.00 0.00 2.97
478 492 7.741027 AACCATCTCATTACATCTTGCTATG 57.259 36.000 0.00 0.00 0.00 2.23
567 662 0.898320 ACTCTATGACAAGCTGCCGT 59.102 50.000 0.00 0.00 0.00 5.68
575 670 0.817634 ACAAGCTGCCGTTGCTGTAA 60.818 50.000 0.00 0.00 41.03 2.41
602 697 8.640651 CAGCATCAATATACTATATCCAGCTCT 58.359 37.037 0.00 0.00 0.00 4.09
636 731 8.874744 ATCTGGGATTATTAAATGAGTCCATG 57.125 34.615 0.00 0.00 32.36 3.66
637 732 7.815383 TCTGGGATTATTAAATGAGTCCATGT 58.185 34.615 0.00 0.00 32.36 3.21
689 890 2.829914 ACGGCGCCAATCATGCAT 60.830 55.556 28.98 0.00 0.00 3.96
693 894 1.299620 GCGCCAATCATGCATCCAC 60.300 57.895 0.00 0.00 0.00 4.02
700 901 3.253432 CCAATCATGCATCCACTCATCAG 59.747 47.826 0.00 0.00 0.00 2.90
703 906 2.770232 TCATGCATCCACTCATCAGACT 59.230 45.455 0.00 0.00 0.00 3.24
727 930 7.038729 ACTGTTTACAGAGAGGATTTGATCAGA 60.039 37.037 16.31 0.00 46.59 3.27
728 931 7.326454 TGTTTACAGAGAGGATTTGATCAGAG 58.674 38.462 0.00 0.00 0.00 3.35
729 932 7.038729 TGTTTACAGAGAGGATTTGATCAGAGT 60.039 37.037 0.00 0.00 0.00 3.24
730 933 8.470805 GTTTACAGAGAGGATTTGATCAGAGTA 58.529 37.037 0.00 0.00 0.00 2.59
731 934 6.463995 ACAGAGAGGATTTGATCAGAGTAC 57.536 41.667 0.00 0.00 0.00 2.73
733 936 6.321181 ACAGAGAGGATTTGATCAGAGTACTC 59.679 42.308 15.41 15.41 0.00 2.59
734 937 6.320926 CAGAGAGGATTTGATCAGAGTACTCA 59.679 42.308 24.44 5.48 0.00 3.41
735 938 6.547141 AGAGAGGATTTGATCAGAGTACTCAG 59.453 42.308 24.44 16.89 0.00 3.35
740 1012 5.651387 TTTGATCAGAGTACTCAGTCCAG 57.349 43.478 24.44 7.27 0.00 3.86
745 1017 1.076350 AGAGTACTCAGTCCAGCCAGT 59.924 52.381 24.44 0.00 0.00 4.00
777 1049 0.676466 ACAAGCGATTTGGGCGATGA 60.676 50.000 5.30 0.00 41.25 2.92
832 1146 1.070601 TGACATGACATATGGAGGCCG 59.929 52.381 7.80 0.00 0.00 6.13
860 1179 2.642700 GTTGTCGCCATTGCCGTT 59.357 55.556 0.00 0.00 0.00 4.44
862 1181 1.599518 TTGTCGCCATTGCCGTTCT 60.600 52.632 0.00 0.00 0.00 3.01
1129 1460 2.027625 CACGACGACAAGAAGGCCC 61.028 63.158 0.00 0.00 0.00 5.80
1253 1726 0.771127 CCTCCCTCACCCTTTCACAA 59.229 55.000 0.00 0.00 0.00 3.33
1269 2965 7.862873 CCCTTTCACAAGATTTGTTTTCTAGAC 59.137 37.037 0.00 0.00 43.23 2.59
1288 3026 5.897377 AGACCAAATTACCATTTTCTCCG 57.103 39.130 0.00 0.00 29.41 4.63
1321 3260 1.449353 CCATGCAGCCCTCTAGACC 59.551 63.158 0.00 0.00 0.00 3.85
1330 3270 1.418264 GCCCTCTAGACCATCCTTTCC 59.582 57.143 0.00 0.00 0.00 3.13
1335 3275 4.719273 CCTCTAGACCATCCTTTCCTTTCT 59.281 45.833 0.00 0.00 0.00 2.52
1336 3276 5.900123 CCTCTAGACCATCCTTTCCTTTCTA 59.100 44.000 0.00 0.00 0.00 2.10
1341 3281 3.523972 ACCATCCTTTCCTTTCTACTCCC 59.476 47.826 0.00 0.00 0.00 4.30
1343 3283 4.141597 CCATCCTTTCCTTTCTACTCCCTC 60.142 50.000 0.00 0.00 0.00 4.30
1344 3284 3.451890 TCCTTTCCTTTCTACTCCCTCC 58.548 50.000 0.00 0.00 0.00 4.30
1346 3286 2.617840 TTCCTTTCTACTCCCTCCGT 57.382 50.000 0.00 0.00 0.00 4.69
1347 3287 2.140839 TCCTTTCTACTCCCTCCGTC 57.859 55.000 0.00 0.00 0.00 4.79
1348 3288 1.112950 CCTTTCTACTCCCTCCGTCC 58.887 60.000 0.00 0.00 0.00 4.79
1349 3289 0.739561 CTTTCTACTCCCTCCGTCCG 59.260 60.000 0.00 0.00 0.00 4.79
1350 3290 0.329261 TTTCTACTCCCTCCGTCCGA 59.671 55.000 0.00 0.00 0.00 4.55
1351 3291 0.329261 TTCTACTCCCTCCGTCCGAA 59.671 55.000 0.00 0.00 0.00 4.30
1352 3292 0.329261 TCTACTCCCTCCGTCCGAAA 59.671 55.000 0.00 0.00 0.00 3.46
1353 3293 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
1356 3296 1.755380 ACTCCCTCCGTCCGAAAATAG 59.245 52.381 0.00 0.00 0.00 1.73
1359 3299 2.093869 TCCCTCCGTCCGAAAATAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
1360 3300 2.354403 CCCTCCGTCCGAAAATAGTTGT 60.354 50.000 0.00 0.00 0.00 3.32
1361 3301 2.928116 CCTCCGTCCGAAAATAGTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1362 3302 3.581755 CTCCGTCCGAAAATAGTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
1363 3303 4.181578 CTCCGTCCGAAAATAGTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
1364 3304 4.178540 TCCGTCCGAAAATAGTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
1365 3305 3.930229 CCGTCCGAAAATAGTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
1366 3306 4.390603 CCGTCCGAAAATAGTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
1367 3307 5.106869 CCGTCCGAAAATAGTTGTCATCAAA 60.107 40.000 0.00 0.00 35.20 2.69
1368 3308 6.367421 CGTCCGAAAATAGTTGTCATCAAAA 58.633 36.000 0.00 0.00 35.20 2.44
1369 3309 7.021196 CGTCCGAAAATAGTTGTCATCAAAAT 58.979 34.615 0.00 0.00 35.20 1.82
1370 3310 7.007367 CGTCCGAAAATAGTTGTCATCAAAATG 59.993 37.037 0.00 0.00 35.20 2.32
1371 3311 7.273381 GTCCGAAAATAGTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 35.20 3.16
1372 3312 7.175816 TCCGAAAATAGTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 35.20 3.41
1373 3313 7.975616 CCGAAAATAGTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 35.20 3.41
1416 3356 9.717942 AGAACTAAAATGCATCTAGATACATCC 57.282 33.333 17.09 3.81 0.00 3.51
1417 3357 8.854614 AACTAAAATGCATCTAGATACATCCC 57.145 34.615 17.09 0.00 0.00 3.85
1418 3358 7.398024 ACTAAAATGCATCTAGATACATCCCC 58.602 38.462 17.09 0.00 0.00 4.81
1419 3359 6.460103 AAAATGCATCTAGATACATCCCCT 57.540 37.500 17.09 1.19 0.00 4.79
1420 3360 6.460103 AAATGCATCTAGATACATCCCCTT 57.540 37.500 17.09 6.79 0.00 3.95
1421 3361 5.690464 ATGCATCTAGATACATCCCCTTC 57.310 43.478 12.00 0.00 0.00 3.46
1422 3362 4.756564 TGCATCTAGATACATCCCCTTCT 58.243 43.478 4.54 0.00 0.00 2.85
1423 3363 5.903923 TGCATCTAGATACATCCCCTTCTA 58.096 41.667 4.54 0.00 0.00 2.10
1424 3364 6.506661 TGCATCTAGATACATCCCCTTCTAT 58.493 40.000 4.54 0.00 0.00 1.98
1425 3365 6.609212 TGCATCTAGATACATCCCCTTCTATC 59.391 42.308 4.54 0.00 0.00 2.08
1426 3366 6.041523 GCATCTAGATACATCCCCTTCTATCC 59.958 46.154 4.54 0.00 0.00 2.59
1427 3367 6.736561 TCTAGATACATCCCCTTCTATCCA 57.263 41.667 0.00 0.00 0.00 3.41
1428 3368 7.304054 TCTAGATACATCCCCTTCTATCCAT 57.696 40.000 0.00 0.00 0.00 3.41
1429 3369 7.723382 TCTAGATACATCCCCTTCTATCCATT 58.277 38.462 0.00 0.00 0.00 3.16
1430 3370 8.186985 TCTAGATACATCCCCTTCTATCCATTT 58.813 37.037 0.00 0.00 0.00 2.32
1431 3371 7.654287 AGATACATCCCCTTCTATCCATTTT 57.346 36.000 0.00 0.00 0.00 1.82
1432 3372 7.465116 AGATACATCCCCTTCTATCCATTTTG 58.535 38.462 0.00 0.00 0.00 2.44
1433 3373 5.732331 ACATCCCCTTCTATCCATTTTGA 57.268 39.130 0.00 0.00 0.00 2.69
1434 3374 6.285329 ACATCCCCTTCTATCCATTTTGAT 57.715 37.500 0.00 0.00 0.00 2.57
1435 3375 6.073314 ACATCCCCTTCTATCCATTTTGATG 58.927 40.000 0.00 0.00 33.80 3.07
1436 3376 5.992564 TCCCCTTCTATCCATTTTGATGA 57.007 39.130 0.00 0.00 0.00 2.92
1437 3377 5.694995 TCCCCTTCTATCCATTTTGATGAC 58.305 41.667 0.00 0.00 0.00 3.06
1438 3378 5.193527 TCCCCTTCTATCCATTTTGATGACA 59.806 40.000 0.00 0.00 0.00 3.58
1439 3379 5.893255 CCCCTTCTATCCATTTTGATGACAA 59.107 40.000 0.00 0.00 0.00 3.18
1440 3380 6.040166 CCCCTTCTATCCATTTTGATGACAAG 59.960 42.308 0.00 0.00 37.32 3.16
1441 3381 6.604795 CCCTTCTATCCATTTTGATGACAAGT 59.395 38.462 0.00 0.00 37.32 3.16
1442 3382 7.775093 CCCTTCTATCCATTTTGATGACAAGTA 59.225 37.037 0.00 0.00 37.32 2.24
1443 3383 9.347240 CCTTCTATCCATTTTGATGACAAGTAT 57.653 33.333 0.00 0.00 37.32 2.12
1447 3387 9.956720 CTATCCATTTTGATGACAAGTATTTCC 57.043 33.333 0.00 0.00 37.32 3.13
1448 3388 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
1449 3389 6.035843 CCATTTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
1450 3390 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
1451 3391 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
1452 3392 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
1453 3393 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
1454 3394 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
1455 3395 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
1456 3396 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1457 3397 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1458 3398 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
1459 3399 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1460 3400 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
1461 3401 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1462 3402 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
1466 3406 0.950116 CGGACGGAGGGAGTATGTAC 59.050 60.000 0.00 0.00 0.00 2.90
1475 3415 5.105473 CGGAGGGAGTATGTACAAAAGAAGA 60.105 44.000 0.00 0.00 0.00 2.87
1476 3416 6.107343 GGAGGGAGTATGTACAAAAGAAGAC 58.893 44.000 0.00 0.00 0.00 3.01
1525 3465 5.130292 AGTGCTTGAATGGAGAATTTGTG 57.870 39.130 0.00 0.00 0.00 3.33
1580 3520 5.031066 TGCAGGGTATCATTGGTACTAAC 57.969 43.478 7.01 0.00 0.00 2.34
1582 3522 5.163343 TGCAGGGTATCATTGGTACTAACTC 60.163 44.000 7.01 0.00 0.00 3.01
1583 3523 5.070580 GCAGGGTATCATTGGTACTAACTCT 59.929 44.000 7.01 0.00 0.00 3.24
1584 3524 6.408206 GCAGGGTATCATTGGTACTAACTCTT 60.408 42.308 7.01 0.00 0.00 2.85
1585 3525 7.201974 GCAGGGTATCATTGGTACTAACTCTTA 60.202 40.741 7.01 0.00 0.00 2.10
1643 3828 6.073276 GGCCACATTTCTAATTTTGGTGTTTC 60.073 38.462 0.00 0.00 0.00 2.78
1651 3839 9.495572 TTTCTAATTTTGGTGTTTCTGTGTTTT 57.504 25.926 0.00 0.00 0.00 2.43
1702 3898 3.068024 TGTGACACAATCCCTTTCTTTGC 59.932 43.478 5.62 0.00 0.00 3.68
1763 3988 7.059488 CGTTCATTTTCTCCTGTTTTCAATACG 59.941 37.037 0.00 0.00 0.00 3.06
1772 3997 6.289834 TCCTGTTTTCAATACGGTTCTACAA 58.710 36.000 0.00 0.00 0.00 2.41
1774 3999 6.017770 CCTGTTTTCAATACGGTTCTACAACA 60.018 38.462 0.00 0.00 33.70 3.33
1785 4251 3.187842 GGTTCTACAACACACGATTTCCC 59.812 47.826 0.00 0.00 33.70 3.97
1816 4286 9.466497 AGTCAAGCCTTAATCTATGATTCAAAA 57.534 29.630 0.00 0.00 0.00 2.44
1842 4327 2.098770 GGCTTCATGGTTGCATCTTCTC 59.901 50.000 0.00 0.00 0.00 2.87
1853 4338 5.819379 GGTTGCATCTTCTCACAGAATGATA 59.181 40.000 0.00 0.00 39.69 2.15
1898 4383 8.627208 ATGGAAAAGCTACATATGTATCAAGG 57.373 34.615 15.81 5.48 0.00 3.61
1964 4449 4.217767 GGAGCAAAGTTTACCAAGGTAAGG 59.782 45.833 11.22 3.15 40.98 2.69
2003 4492 4.773323 AAACCTGAATGTTCTTAGCAGC 57.227 40.909 0.00 0.00 0.00 5.25
2007 4496 5.560724 ACCTGAATGTTCTTAGCAGCTAAA 58.439 37.500 15.84 1.60 0.00 1.85
2008 4497 6.183347 ACCTGAATGTTCTTAGCAGCTAAAT 58.817 36.000 15.84 3.97 0.00 1.40
2061 4555 4.289672 TCTCCAACTATGCTCCCTTTTTCT 59.710 41.667 0.00 0.00 0.00 2.52
2062 4556 4.335416 TCCAACTATGCTCCCTTTTTCTG 58.665 43.478 0.00 0.00 0.00 3.02
2074 4568 3.392882 CCTTTTTCTGCGGAAAATGCTT 58.607 40.909 29.14 0.00 46.57 3.91
2118 4616 8.732746 TTGCAACTTTCTTACTCTCTTAAGTT 57.267 30.769 1.63 0.00 36.55 2.66
2158 5513 5.277011 CGTGCATGTGTATGACTTAATCCAG 60.277 44.000 0.00 0.00 36.36 3.86
2171 7826 5.254115 ACTTAATCCAGCACTAAAACCCTC 58.746 41.667 0.00 0.00 0.00 4.30
2173 7828 4.388577 AATCCAGCACTAAAACCCTCTT 57.611 40.909 0.00 0.00 0.00 2.85
2215 7871 9.053840 GGGTTTAGTGAAGGCTATATAAGAAAC 57.946 37.037 0.00 0.00 0.00 2.78
2228 7884 1.452145 AAGAAACCGGTTGTGCGCAT 61.452 50.000 23.08 2.08 0.00 4.73
2235 7891 1.863491 GGTTGTGCGCATACGTGAA 59.137 52.632 15.91 0.00 42.83 3.18
2298 7956 7.042119 GGTGTTTTTGGATTGTTTATGGTTCTG 60.042 37.037 0.00 0.00 0.00 3.02
2325 7983 8.691661 TGCAAGAACTTAGGAAGAAACTTAAT 57.308 30.769 0.00 0.00 0.00 1.40
2425 8088 7.118971 TGTTTCATGGCCATTTTATTTTAGTGC 59.881 33.333 17.92 0.00 0.00 4.40
2435 8098 9.824534 CCATTTTATTTTAGTGCCAATTTGTTC 57.175 29.630 0.00 0.00 0.00 3.18
2626 8357 2.953648 CTGCATGATAAAGGGCACATGA 59.046 45.455 0.00 0.00 41.45 3.07
2637 8368 1.826720 GGGCACATGACAAATGTGGAT 59.173 47.619 17.54 0.00 46.85 3.41
2758 8490 2.426522 CTTTCACCGCTCATCCAAAGA 58.573 47.619 0.00 0.00 0.00 2.52
2890 8653 2.422597 CTTTGGGTACTCGCATGAACA 58.577 47.619 0.00 0.00 36.44 3.18
2948 8711 0.676466 TTATGCTTGACCCTGTGCCG 60.676 55.000 0.00 0.00 0.00 5.69
2960 8723 2.158813 CCCTGTGCCGATAACAATACCT 60.159 50.000 0.00 0.00 0.00 3.08
2969 8732 5.050091 GCCGATAACAATACCTGAATCTGTG 60.050 44.000 0.00 0.00 0.00 3.66
2999 8762 5.163581 GCATGACTTTGCCATTACAGAGAAT 60.164 40.000 0.00 0.00 36.60 2.40
3125 9288 5.441709 TTTTCCCGTGTACCATTTCTTTC 57.558 39.130 0.00 0.00 0.00 2.62
3127 9290 2.089201 CCCGTGTACCATTTCTTTCCC 58.911 52.381 0.00 0.00 0.00 3.97
3139 9302 4.853924 TTTCTTTCCCTCATGTTGAAGC 57.146 40.909 0.00 0.00 0.00 3.86
3164 9329 4.180057 GCCAGTCAACATTTGTTTCACAA 58.820 39.130 0.00 0.00 35.83 3.33
3187 9355 7.496591 ACAATTGCATGGGATCAACATATTTTC 59.503 33.333 5.05 0.00 0.00 2.29
3255 9424 6.238759 GGTCTTATTGTAACCTGATGCATTCC 60.239 42.308 0.00 0.00 0.00 3.01
3259 9428 3.346315 TGTAACCTGATGCATTCCTGTG 58.654 45.455 0.00 0.00 0.00 3.66
3276 9445 3.254657 CCTGTGTAAAGGAAATGGCGAAA 59.745 43.478 0.00 0.00 40.02 3.46
3342 9511 2.018542 TTGGCATACTCCAACGCTAC 57.981 50.000 0.00 0.00 40.92 3.58
3459 9629 7.386025 TCCGAATGTGCAATCTTTCTATATCAG 59.614 37.037 0.00 0.00 0.00 2.90
3464 9634 8.565896 TGTGCAATCTTTCTATATCAGTTGTT 57.434 30.769 0.00 0.00 0.00 2.83
3465 9635 8.453320 TGTGCAATCTTTCTATATCAGTTGTTG 58.547 33.333 0.00 0.00 0.00 3.33
3482 9652 7.870445 TCAGTTGTTGTTAATTCAAAATAGCCC 59.130 33.333 0.00 0.00 0.00 5.19
3483 9653 7.655328 CAGTTGTTGTTAATTCAAAATAGCCCA 59.345 33.333 0.00 0.00 0.00 5.36
3489 9659 7.382898 TGTTAATTCAAAATAGCCCAGGAAAC 58.617 34.615 0.00 0.00 0.00 2.78
3491 9661 3.149005 TCAAAATAGCCCAGGAAACGT 57.851 42.857 0.00 0.00 0.00 3.99
3492 9662 3.078837 TCAAAATAGCCCAGGAAACGTC 58.921 45.455 0.00 0.00 0.00 4.34
3495 9665 0.175073 ATAGCCCAGGAAACGTCGAC 59.825 55.000 5.18 5.18 0.00 4.20
3547 9720 1.198713 ACAATGTTGTTTGGCACCCA 58.801 45.000 0.00 0.00 38.47 4.51
3548 9721 1.767681 ACAATGTTGTTTGGCACCCAT 59.232 42.857 0.00 0.00 38.47 4.00
3549 9722 2.968574 ACAATGTTGTTTGGCACCCATA 59.031 40.909 0.00 0.00 38.47 2.74
3550 9723 3.006752 ACAATGTTGTTTGGCACCCATAG 59.993 43.478 0.00 0.00 38.47 2.23
3551 9724 0.965439 TGTTGTTTGGCACCCATAGC 59.035 50.000 0.00 0.00 31.53 2.97
3552 9725 0.965439 GTTGTTTGGCACCCATAGCA 59.035 50.000 0.00 0.00 31.53 3.49
3553 9726 1.550072 GTTGTTTGGCACCCATAGCAT 59.450 47.619 0.00 0.00 31.53 3.79
3554 9727 2.757868 GTTGTTTGGCACCCATAGCATA 59.242 45.455 0.00 0.00 31.53 3.14
3555 9728 3.093057 TGTTTGGCACCCATAGCATAA 57.907 42.857 0.00 0.00 31.53 1.90
3556 9729 3.023119 TGTTTGGCACCCATAGCATAAG 58.977 45.455 0.00 0.00 31.53 1.73
3623 9883 2.101750 TGCAACGTCAGTTCCTTGAGTA 59.898 45.455 0.00 0.00 38.79 2.59
3631 9896 7.439381 ACGTCAGTTCCTTGAGTAATTTTAGA 58.561 34.615 0.00 0.00 0.00 2.10
3756 10021 4.651045 AGTGAAACCCATCTTGCTTCTTTT 59.349 37.500 0.00 0.00 37.80 2.27
3784 10055 4.517832 AGCACATATCAATCGATGCATTGT 59.482 37.500 13.73 1.46 35.56 2.71
3880 10155 0.625683 ATGCCTGGGAAGAGGGTGAT 60.626 55.000 0.00 0.00 33.17 3.06
4131 10414 1.137086 TCTGCCATAGACTTTCCTCGC 59.863 52.381 0.00 0.00 0.00 5.03
4275 10642 8.934507 AGTAAGATTCCTTTTGAGAACTATCG 57.065 34.615 0.00 0.00 33.94 2.92
4299 10666 8.528643 TCGAACTTCCTCTCATCTGTTATTTTA 58.471 33.333 0.00 0.00 0.00 1.52
4604 10985 7.110155 GGTACTCCTTTCATTTCCTACATCAA 58.890 38.462 0.00 0.00 0.00 2.57
4634 11015 3.899980 AGATGCTACTGCTACATGGATGA 59.100 43.478 0.00 0.00 40.48 2.92
4648 11029 4.583489 ACATGGATGATGGAAATCTGAAGC 59.417 41.667 0.00 0.00 36.23 3.86
4683 11066 7.551035 AATTTTGTTTTCTTTGCATGCACTA 57.449 28.000 22.58 10.81 0.00 2.74
4723 11106 6.990798 TGAAGTAAATGTGATTGATGCCAAA 58.009 32.000 0.00 0.00 35.67 3.28
4733 11116 4.218200 TGATTGATGCCAAAACGATGTCTT 59.782 37.500 0.00 0.00 35.67 3.01
4751 11134 1.207089 CTTCTGATCCAGTGGCGGTTA 59.793 52.381 3.51 0.00 32.61 2.85
4765 11148 1.453155 CGGTTATTGAGCTGCCAAGT 58.547 50.000 0.00 0.00 0.00 3.16
4883 11267 8.359875 TCAGGAGAAATATTGGTATTTGCAAA 57.640 30.769 15.44 15.44 39.88 3.68
4910 11294 4.365723 AGCTGCTTTGTGTTGATGAAAAG 58.634 39.130 0.00 0.00 33.67 2.27
4974 11358 1.202582 TCAAGTAGAGCGGTGAAGAGC 59.797 52.381 0.00 0.00 0.00 4.09
4983 11367 3.270877 AGCGGTGAAGAGCGATAAAAAT 58.729 40.909 0.00 0.00 46.19 1.82
5041 11431 6.203915 TGTGCGTGATGTAGTATCTTTTTGTT 59.796 34.615 0.00 0.00 0.00 2.83
5054 11444 2.420628 TTTTGTTTGCCAGATCAGCG 57.579 45.000 0.00 0.00 0.00 5.18
5055 11445 0.039256 TTTGTTTGCCAGATCAGCGC 60.039 50.000 0.00 0.00 0.00 5.92
5059 11449 2.850806 TTTGCCAGATCAGCGCGCTA 62.851 55.000 36.02 22.05 0.00 4.26
5083 11473 7.654022 ATGAAGGGTTTCACTTAGTTTTTCA 57.346 32.000 0.00 0.00 45.54 2.69
5090 11480 7.551262 GGGTTTCACTTAGTTTTTCACCAATTT 59.449 33.333 0.00 0.00 0.00 1.82
5098 11488 4.062293 GTTTTTCACCAATTTACTGGGCC 58.938 43.478 0.00 0.00 41.16 5.80
5101 11491 2.243810 TCACCAATTTACTGGGCCAAC 58.756 47.619 8.04 0.00 41.16 3.77
5178 11571 8.894768 ATAGAGGAAAGTAGCATTGTAACATC 57.105 34.615 0.00 0.00 0.00 3.06
5179 11572 6.116126 AGAGGAAAGTAGCATTGTAACATCC 58.884 40.000 0.00 0.00 0.00 3.51
5180 11573 5.193679 AGGAAAGTAGCATTGTAACATCCC 58.806 41.667 0.00 0.00 0.00 3.85
5181 11574 4.947388 GGAAAGTAGCATTGTAACATCCCA 59.053 41.667 0.00 0.00 0.00 4.37
5182 11575 5.417580 GGAAAGTAGCATTGTAACATCCCAA 59.582 40.000 0.00 0.00 0.00 4.12
5183 11576 6.071616 GGAAAGTAGCATTGTAACATCCCAAA 60.072 38.462 0.00 0.00 0.00 3.28
5185 11578 7.480760 AAGTAGCATTGTAACATCCCAAAAT 57.519 32.000 0.00 0.00 0.00 1.82
5186 11579 7.480760 AGTAGCATTGTAACATCCCAAAATT 57.519 32.000 0.00 0.00 0.00 1.82
5187 11580 7.547227 AGTAGCATTGTAACATCCCAAAATTC 58.453 34.615 0.00 0.00 0.00 2.17
5188 11581 6.610075 AGCATTGTAACATCCCAAAATTCT 57.390 33.333 0.00 0.00 0.00 2.40
5189 11582 7.716799 AGCATTGTAACATCCCAAAATTCTA 57.283 32.000 0.00 0.00 0.00 2.10
5190 11583 8.133024 AGCATTGTAACATCCCAAAATTCTAA 57.867 30.769 0.00 0.00 0.00 2.10
5191 11584 8.592809 AGCATTGTAACATCCCAAAATTCTAAA 58.407 29.630 0.00 0.00 0.00 1.85
5192 11585 9.382275 GCATTGTAACATCCCAAAATTCTAAAT 57.618 29.630 0.00 0.00 0.00 1.40
5240 11633 9.874205 AACAACATGGATTATCTGTAAAAATGG 57.126 29.630 0.00 0.00 0.00 3.16
5249 11642 2.752354 TCTGTAAAAATGGTCCATGGCG 59.248 45.455 6.96 0.00 0.00 5.69
5251 11644 2.490115 TGTAAAAATGGTCCATGGCGAC 59.510 45.455 6.96 0.00 0.00 5.19
5263 11657 2.354303 CCATGGCGACCTTACAACACTA 60.354 50.000 0.00 0.00 0.00 2.74
5266 11660 2.288579 TGGCGACCTTACAACACTACAG 60.289 50.000 0.00 0.00 0.00 2.74
5284 11678 7.885399 ACACTACAGAAAAGCCTCTTATTGAAT 59.115 33.333 0.00 0.00 0.00 2.57
5293 11687 5.513233 AGCCTCTTATTGAATGACACCATT 58.487 37.500 0.00 0.00 45.10 3.16
5355 12492 9.581289 TTTTTCTGGAAATGTCATAAAGAGGTA 57.419 29.630 0.00 0.00 0.00 3.08
5376 12513 9.130312 GAGGTAATCGCATATGAGTTTTACTAG 57.870 37.037 21.53 0.00 0.00 2.57
5382 12519 9.817809 ATCGCATATGAGTTTTACTAGAAGAAA 57.182 29.630 6.97 0.00 0.00 2.52
5435 12572 3.577805 AATGTGCTACTAACCCCCATC 57.422 47.619 0.00 0.00 0.00 3.51
5440 12577 1.968493 GCTACTAACCCCCATCGATCA 59.032 52.381 0.00 0.00 0.00 2.92
5454 12591 2.720933 TCGATCATCGCTTCTTTCTCG 58.279 47.619 0.80 0.00 40.21 4.04
5458 12596 3.085443 TCATCGCTTCTTTCTCGGATC 57.915 47.619 0.00 0.00 0.00 3.36
5469 12607 0.547075 TCTCGGATCGTCTCCCTCTT 59.453 55.000 1.96 0.00 41.49 2.85
5471 12611 0.814410 TCGGATCGTCTCCCTCTTCG 60.814 60.000 1.96 0.00 41.49 3.79
5511 12651 2.059756 TCCCCTCCTCCACTCATTTT 57.940 50.000 0.00 0.00 0.00 1.82
5518 12660 2.038426 TCCTCCACTCATTTTCGCTTCA 59.962 45.455 0.00 0.00 0.00 3.02
5541 12683 0.692476 CCACCTCTTCCACCATGTCA 59.308 55.000 0.00 0.00 0.00 3.58
5551 12693 3.522759 TCCACCATGTCAACTAGGGTTA 58.477 45.455 0.00 0.00 33.88 2.85
5553 12695 3.263425 CCACCATGTCAACTAGGGTTACT 59.737 47.826 0.00 0.00 33.88 2.24
5556 12698 4.181578 CCATGTCAACTAGGGTTACTTCG 58.818 47.826 0.00 0.00 33.88 3.79
5564 16430 0.035439 AGGGTTACTTCGGCATGTGG 60.035 55.000 0.00 0.00 0.00 4.17
5644 18529 4.194640 GAGCATATTGAGAGGTGAAGCAA 58.805 43.478 0.00 0.00 0.00 3.91
5655 18541 2.108952 AGGTGAAGCAACCCTTGATCTT 59.891 45.455 0.00 0.00 41.54 2.40
5661 18547 5.483937 TGAAGCAACCCTTGATCTTCTACTA 59.516 40.000 0.00 0.00 33.58 1.82
5688 18688 1.137513 GACAAGAGGAACGGTTGTCG 58.862 55.000 0.00 0.00 42.66 4.35
5690 18690 1.343465 ACAAGAGGAACGGTTGTCGAT 59.657 47.619 0.00 0.00 42.43 3.59
5712 19107 1.918800 AAAGCTAGGAGGCGGTGGT 60.919 57.895 0.00 0.00 37.29 4.16
5747 19829 1.106944 CCTTGCGGGTTGACCTTTGT 61.107 55.000 0.00 0.00 36.97 2.83
5774 21048 1.490490 AGGGAGGCATTCGAGCATAAA 59.510 47.619 0.00 0.00 35.83 1.40
5786 21060 7.515684 GCATTCGAGCATAAAATCACCATTTTC 60.516 37.037 0.00 0.00 40.69 2.29
5826 21100 7.500892 TCTCTATCTCAGAAGGTAATGTGAGTC 59.499 40.741 2.04 0.00 40.55 3.36
5874 21379 5.515270 GGCGACTTAATTTTAACCAGCAATC 59.485 40.000 0.00 0.00 0.00 2.67
5879 21384 8.113173 ACTTAATTTTAACCAGCAATCGGTAA 57.887 30.769 0.00 0.00 34.99 2.85
5881 21386 6.584185 AATTTTAACCAGCAATCGGTAAGT 57.416 33.333 0.00 0.00 34.99 2.24
5914 21419 3.751175 TGATGACCATGAAGAACCGTTTC 59.249 43.478 0.00 0.00 0.00 2.78
5916 21421 4.610605 TGACCATGAAGAACCGTTTCTA 57.389 40.909 0.00 0.00 41.56 2.10
5917 21422 5.160607 TGACCATGAAGAACCGTTTCTAT 57.839 39.130 0.00 0.00 41.56 1.98
5950 21456 1.112113 GTAGTGCTAGCTAGGTGGCA 58.888 55.000 26.60 26.60 34.17 4.92
5951 21457 1.689273 GTAGTGCTAGCTAGGTGGCAT 59.311 52.381 31.45 22.34 37.05 4.40
5969 21475 3.377172 GGCATCCCATTAACAGTACACAC 59.623 47.826 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.077821 GAGCGGACGGGAGAGATTCC 62.078 65.000 0.00 0.00 46.00 3.01
9 10 1.360911 GAGCGGACGGGAGAGATTC 59.639 63.158 0.00 0.00 0.00 2.52
10 11 2.128507 GGAGCGGACGGGAGAGATT 61.129 63.158 0.00 0.00 0.00 2.40
11 12 2.519780 GGAGCGGACGGGAGAGAT 60.520 66.667 0.00 0.00 0.00 2.75
12 13 4.043100 TGGAGCGGACGGGAGAGA 62.043 66.667 0.00 0.00 0.00 3.10
13 14 3.827898 GTGGAGCGGACGGGAGAG 61.828 72.222 0.00 0.00 0.00 3.20
14 15 4.361971 AGTGGAGCGGACGGGAGA 62.362 66.667 0.00 0.00 0.00 3.71
15 16 3.827898 GAGTGGAGCGGACGGGAG 61.828 72.222 0.00 0.00 0.00 4.30
28 29 4.504916 CTGGAGCTCCGCGGAGTG 62.505 72.222 45.36 29.68 43.70 3.51
40 41 0.108424 CTCAAACCGAGCTCCTGGAG 60.108 60.000 19.55 19.55 34.18 3.86
41 42 1.975327 CTCAAACCGAGCTCCTGGA 59.025 57.895 13.94 0.00 34.18 3.86
42 43 4.606071 CTCAAACCGAGCTCCTGG 57.394 61.111 8.47 7.15 34.18 4.45
49 50 2.097038 CGGAGCAGCTCAAACCGAG 61.097 63.158 24.09 2.40 45.31 4.63
50 51 2.048222 CGGAGCAGCTCAAACCGA 60.048 61.111 24.09 0.00 45.31 4.69
52 53 2.328099 CCACGGAGCAGCTCAAACC 61.328 63.158 24.09 6.26 31.08 3.27
53 54 0.884704 TTCCACGGAGCAGCTCAAAC 60.885 55.000 24.09 5.93 31.08 2.93
54 55 0.179032 TTTCCACGGAGCAGCTCAAA 60.179 50.000 24.09 12.17 31.08 2.69
55 56 0.036732 ATTTCCACGGAGCAGCTCAA 59.963 50.000 24.09 8.81 31.08 3.02
56 57 0.901827 TATTTCCACGGAGCAGCTCA 59.098 50.000 24.09 1.52 31.08 4.26
57 58 1.936547 CTTATTTCCACGGAGCAGCTC 59.063 52.381 14.69 14.69 0.00 4.09
58 59 2.014068 GCTTATTTCCACGGAGCAGCT 61.014 52.381 0.00 0.00 33.68 4.24
59 60 0.378610 GCTTATTTCCACGGAGCAGC 59.621 55.000 0.00 0.00 33.68 5.25
60 61 1.667724 CAGCTTATTTCCACGGAGCAG 59.332 52.381 0.00 0.00 35.86 4.24
61 62 1.737838 CAGCTTATTTCCACGGAGCA 58.262 50.000 0.00 0.00 35.86 4.26
62 63 0.378610 GCAGCTTATTTCCACGGAGC 59.621 55.000 0.00 0.00 0.00 4.70
63 64 1.667724 CTGCAGCTTATTTCCACGGAG 59.332 52.381 0.00 0.00 0.00 4.63
64 65 1.003118 ACTGCAGCTTATTTCCACGGA 59.997 47.619 15.27 0.00 0.00 4.69
65 66 1.453155 ACTGCAGCTTATTTCCACGG 58.547 50.000 15.27 0.00 0.00 4.94
66 67 3.492313 GAAACTGCAGCTTATTTCCACG 58.508 45.455 15.27 0.00 0.00 4.94
67 68 3.838120 GGAAACTGCAGCTTATTTCCAC 58.162 45.455 28.60 12.18 46.26 4.02
80 81 1.743252 CCAGAGCGGAGGAAACTGC 60.743 63.158 0.00 0.00 46.81 4.40
81 82 1.078848 CCCAGAGCGGAGGAAACTG 60.079 63.158 0.00 0.00 44.43 3.16
82 83 1.261238 CTCCCAGAGCGGAGGAAACT 61.261 60.000 0.00 0.00 45.03 2.66
83 84 1.219393 CTCCCAGAGCGGAGGAAAC 59.781 63.158 0.00 0.00 45.03 2.78
84 85 3.713650 CTCCCAGAGCGGAGGAAA 58.286 61.111 0.00 0.00 45.03 3.13
93 94 4.338815 TGGACTACGCTCCCAGAG 57.661 61.111 0.00 0.00 0.00 3.35
95 96 2.427245 CCCTGGACTACGCTCCCAG 61.427 68.421 0.00 0.00 45.28 4.45
96 97 2.363795 CCCTGGACTACGCTCCCA 60.364 66.667 0.00 0.00 0.00 4.37
97 98 2.043248 TCCCTGGACTACGCTCCC 60.043 66.667 0.00 0.00 0.00 4.30
98 99 2.787567 GCTCCCTGGACTACGCTCC 61.788 68.421 0.00 0.00 0.00 4.70
99 100 2.809010 GCTCCCTGGACTACGCTC 59.191 66.667 0.00 0.00 0.00 5.03
100 101 3.141488 CGCTCCCTGGACTACGCT 61.141 66.667 0.00 0.00 0.00 5.07
101 102 4.208686 CCGCTCCCTGGACTACGC 62.209 72.222 0.00 0.00 0.00 4.42
102 103 2.439701 TCCGCTCCCTGGACTACG 60.440 66.667 0.00 0.00 0.00 3.51
103 104 1.076923 TCTCCGCTCCCTGGACTAC 60.077 63.158 0.00 0.00 0.00 2.73
104 105 1.227664 CTCTCCGCTCCCTGGACTA 59.772 63.158 0.00 0.00 0.00 2.59
105 106 2.043450 CTCTCCGCTCCCTGGACT 60.043 66.667 0.00 0.00 0.00 3.85
106 107 3.151022 CCTCTCCGCTCCCTGGAC 61.151 72.222 0.00 0.00 0.00 4.02
107 108 2.931180 TTCCTCTCCGCTCCCTGGA 61.931 63.158 0.00 0.00 0.00 3.86
108 109 2.364317 TTCCTCTCCGCTCCCTGG 60.364 66.667 0.00 0.00 0.00 4.45
109 110 2.726351 GGTTCCTCTCCGCTCCCTG 61.726 68.421 0.00 0.00 0.00 4.45
110 111 2.364448 GGTTCCTCTCCGCTCCCT 60.364 66.667 0.00 0.00 0.00 4.20
111 112 3.839432 CGGTTCCTCTCCGCTCCC 61.839 72.222 0.00 0.00 41.48 4.30
117 118 1.513622 GCTCTCACGGTTCCTCTCC 59.486 63.158 0.00 0.00 0.00 3.71
118 119 0.968393 AGGCTCTCACGGTTCCTCTC 60.968 60.000 0.00 0.00 0.00 3.20
119 120 0.968393 GAGGCTCTCACGGTTCCTCT 60.968 60.000 7.40 0.00 40.02 3.69
120 121 1.513622 GAGGCTCTCACGGTTCCTC 59.486 63.158 7.40 0.00 36.86 3.71
121 122 1.985116 GGAGGCTCTCACGGTTCCT 60.985 63.158 15.23 0.00 31.08 3.36
122 123 2.579738 GGAGGCTCTCACGGTTCC 59.420 66.667 15.23 0.00 31.08 3.62
123 124 2.283529 TGGGAGGCTCTCACGGTTC 61.284 63.158 14.41 0.00 36.56 3.62
124 125 2.203788 TGGGAGGCTCTCACGGTT 60.204 61.111 14.41 0.00 36.56 4.44
125 126 2.997897 GTGGGAGGCTCTCACGGT 60.998 66.667 30.11 0.00 38.21 4.83
128 129 3.403558 GGGGTGGGAGGCTCTCAC 61.404 72.222 34.45 34.45 46.89 3.51
129 130 3.498961 TTGGGGTGGGAGGCTCTCA 62.499 63.158 14.41 14.41 31.08 3.27
130 131 2.610859 TTGGGGTGGGAGGCTCTC 60.611 66.667 15.23 11.70 0.00 3.20
131 132 2.119847 TACTTGGGGTGGGAGGCTCT 62.120 60.000 15.23 0.00 0.00 4.09
132 133 1.615424 TACTTGGGGTGGGAGGCTC 60.615 63.158 5.78 5.78 0.00 4.70
133 134 1.923909 GTACTTGGGGTGGGAGGCT 60.924 63.158 0.00 0.00 0.00 4.58
134 135 2.675371 GTACTTGGGGTGGGAGGC 59.325 66.667 0.00 0.00 0.00 4.70
135 136 2.666098 CCGTACTTGGGGTGGGAGG 61.666 68.421 0.00 0.00 0.00 4.30
136 137 2.666098 CCCGTACTTGGGGTGGGAG 61.666 68.421 0.00 0.00 46.17 4.30
137 138 2.608368 CCCGTACTTGGGGTGGGA 60.608 66.667 0.00 0.00 46.17 4.37
144 145 3.327404 ACCCCTGCCCGTACTTGG 61.327 66.667 0.00 0.00 0.00 3.61
145 146 2.046314 CACCCCTGCCCGTACTTG 60.046 66.667 0.00 0.00 0.00 3.16
146 147 4.029809 GCACCCCTGCCCGTACTT 62.030 66.667 0.00 0.00 37.45 2.24
377 391 4.748892 TGCGACCAATTTTTGAGTTGAAA 58.251 34.783 0.00 0.00 0.00 2.69
421 435 2.049156 TCGGCGTGCTTCTGACAG 60.049 61.111 6.85 0.00 0.00 3.51
433 447 1.438651 TCAAATGGTCTTTCTCGGCG 58.561 50.000 0.00 0.00 0.00 6.46
445 459 9.293404 AGATGTAATGAGATGGTTATCAAATGG 57.707 33.333 0.00 0.00 35.70 3.16
450 464 7.512130 AGCAAGATGTAATGAGATGGTTATCA 58.488 34.615 0.00 0.00 35.70 2.15
463 477 8.370940 ACTACATGTAGCATAGCAAGATGTAAT 58.629 33.333 28.88 4.11 36.66 1.89
471 485 5.551305 ATGGACTACATGTAGCATAGCAA 57.449 39.130 28.88 10.39 38.70 3.91
474 488 5.717178 ACCCTATGGACTACATGTAGCATAG 59.283 44.000 30.46 30.46 40.82 2.23
475 489 5.651303 ACCCTATGGACTACATGTAGCATA 58.349 41.667 28.88 24.72 40.82 3.14
476 490 4.493618 ACCCTATGGACTACATGTAGCAT 58.506 43.478 28.88 24.90 40.82 3.79
477 491 3.895656 GACCCTATGGACTACATGTAGCA 59.104 47.826 28.88 20.73 40.82 3.49
478 492 3.258622 GGACCCTATGGACTACATGTAGC 59.741 52.174 28.88 21.24 40.82 3.58
575 670 8.316497 AGCTGGATATAGTATATTGATGCTGT 57.684 34.615 4.15 0.00 0.00 4.40
628 723 8.922058 TTACTAAAAATAGTCGACATGGACTC 57.078 34.615 19.50 0.00 43.63 3.36
629 724 9.715121 TTTTACTAAAAATAGTCGACATGGACT 57.285 29.630 19.50 9.24 38.86 3.85
630 725 9.968743 CTTTTACTAAAAATAGTCGACATGGAC 57.031 33.333 19.50 0.00 34.18 4.02
631 726 9.932207 TCTTTTACTAAAAATAGTCGACATGGA 57.068 29.630 19.50 0.00 34.18 3.41
689 890 4.832823 TCTGTAAACAGTCTGATGAGTGGA 59.167 41.667 6.91 0.00 45.40 4.02
693 894 5.417266 TCCTCTCTGTAAACAGTCTGATGAG 59.583 44.000 6.91 0.00 44.12 2.90
700 901 7.099764 TGATCAAATCCTCTCTGTAAACAGTC 58.900 38.462 9.81 0.00 44.12 3.51
703 906 7.038729 ACTCTGATCAAATCCTCTCTGTAAACA 60.039 37.037 0.00 0.00 0.00 2.83
727 930 1.203063 TCACTGGCTGGACTGAGTACT 60.203 52.381 0.00 0.00 0.00 2.73
728 931 1.203523 CTCACTGGCTGGACTGAGTAC 59.796 57.143 0.00 0.00 0.00 2.73
729 932 1.075536 TCTCACTGGCTGGACTGAGTA 59.924 52.381 9.30 0.00 33.28 2.59
730 933 0.178950 TCTCACTGGCTGGACTGAGT 60.179 55.000 9.30 0.00 33.28 3.41
731 934 0.246086 GTCTCACTGGCTGGACTGAG 59.754 60.000 4.70 4.70 32.86 3.35
733 936 1.080230 CGTCTCACTGGCTGGACTG 60.080 63.158 0.00 0.00 0.00 3.51
734 937 1.228583 TCGTCTCACTGGCTGGACT 60.229 57.895 0.00 0.00 0.00 3.85
735 938 1.214062 CTCGTCTCACTGGCTGGAC 59.786 63.158 0.00 0.00 0.00 4.02
740 1012 1.000163 TGTCTTTCTCGTCTCACTGGC 60.000 52.381 0.00 0.00 0.00 4.85
745 1017 1.607148 TCGCTTGTCTTTCTCGTCTCA 59.393 47.619 0.00 0.00 0.00 3.27
832 1146 3.103911 CGACAACGACAGCCGACC 61.104 66.667 0.00 0.00 42.66 4.79
860 1179 0.178891 AAGAGCAAGGGAGGGACAGA 60.179 55.000 0.00 0.00 0.00 3.41
862 1181 0.693049 GAAAGAGCAAGGGAGGGACA 59.307 55.000 0.00 0.00 0.00 4.02
935 1254 1.220749 GGTGGCGCTGGAGATTACA 59.779 57.895 7.64 0.00 0.00 2.41
960 1279 1.542492 CTGCTTGTGCTTCTCCCATT 58.458 50.000 0.00 0.00 40.48 3.16
993 1312 1.679680 GCATCTTGTCCCATGGTGATG 59.320 52.381 11.73 15.36 35.69 3.07
994 1313 1.410648 GGCATCTTGTCCCATGGTGAT 60.411 52.381 11.73 3.57 0.00 3.06
995 1314 0.034186 GGCATCTTGTCCCATGGTGA 60.034 55.000 11.73 4.83 0.00 4.02
1006 1325 0.179062 CCCTTCCTCTCGGCATCTTG 60.179 60.000 0.00 0.00 0.00 3.02
1015 1334 2.301738 CCACCACCCCCTTCCTCTC 61.302 68.421 0.00 0.00 0.00 3.20
1253 1726 9.362151 TGGTAATTTGGTCTAGAAAACAAATCT 57.638 29.630 21.70 16.56 41.24 2.40
1269 2965 3.194542 TGCCGGAGAAAATGGTAATTTGG 59.805 43.478 5.05 0.00 36.11 3.28
1288 3026 1.741394 GCATGGCTCCAAGAAAATGCC 60.741 52.381 0.00 0.00 43.49 4.40
1321 3260 4.141597 GGAGGGAGTAGAAAGGAAAGGATG 60.142 50.000 0.00 0.00 0.00 3.51
1330 3270 0.739561 CGGACGGAGGGAGTAGAAAG 59.260 60.000 0.00 0.00 0.00 2.62
1335 3275 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
1336 3276 1.755380 CTATTTTCGGACGGAGGGAGT 59.245 52.381 0.00 0.00 0.00 3.85
1341 3281 3.581755 TGACAACTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
1343 3283 3.930229 TGATGACAACTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
1344 3284 5.524511 TTGATGACAACTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
1346 3286 7.175816 TCCATTTTGATGACAACTATTTTCGGA 59.824 33.333 0.00 0.00 35.63 4.55
1347 3287 7.312154 TCCATTTTGATGACAACTATTTTCGG 58.688 34.615 0.00 0.00 35.63 4.30
1348 3288 8.915871 ATCCATTTTGATGACAACTATTTTCG 57.084 30.769 0.00 0.00 35.63 3.46
1390 3330 9.717942 GGATGTATCTAGATGCATTTTAGTTCT 57.282 33.333 29.66 11.50 42.77 3.01
1391 3331 8.940952 GGGATGTATCTAGATGCATTTTAGTTC 58.059 37.037 29.66 18.97 42.77 3.01
1392 3332 7.885399 GGGGATGTATCTAGATGCATTTTAGTT 59.115 37.037 29.66 12.78 42.77 2.24
1393 3333 7.238514 AGGGGATGTATCTAGATGCATTTTAGT 59.761 37.037 29.66 13.41 42.77 2.24
1394 3334 7.628234 AGGGGATGTATCTAGATGCATTTTAG 58.372 38.462 29.66 6.74 42.77 1.85
1395 3335 7.574021 AGGGGATGTATCTAGATGCATTTTA 57.426 36.000 29.66 8.65 42.77 1.52
1396 3336 6.460103 AGGGGATGTATCTAGATGCATTTT 57.540 37.500 29.66 14.70 42.77 1.82
1397 3337 6.274200 AGAAGGGGATGTATCTAGATGCATTT 59.726 38.462 29.66 21.84 42.77 2.32
1398 3338 5.789575 AGAAGGGGATGTATCTAGATGCATT 59.210 40.000 29.66 18.35 42.77 3.56
1399 3339 5.348833 AGAAGGGGATGTATCTAGATGCAT 58.651 41.667 29.54 29.54 44.84 3.96
1400 3340 4.756564 AGAAGGGGATGTATCTAGATGCA 58.243 43.478 23.38 23.38 37.79 3.96
1401 3341 6.041523 GGATAGAAGGGGATGTATCTAGATGC 59.958 46.154 15.79 14.54 0.00 3.91
1402 3342 7.128751 TGGATAGAAGGGGATGTATCTAGATG 58.871 42.308 15.79 0.00 0.00 2.90
1403 3343 7.304054 TGGATAGAAGGGGATGTATCTAGAT 57.696 40.000 10.73 10.73 0.00 1.98
1404 3344 6.736561 TGGATAGAAGGGGATGTATCTAGA 57.263 41.667 0.00 0.00 0.00 2.43
1405 3345 7.986553 AATGGATAGAAGGGGATGTATCTAG 57.013 40.000 0.00 0.00 0.00 2.43
1406 3346 8.605947 CAAAATGGATAGAAGGGGATGTATCTA 58.394 37.037 0.00 0.00 0.00 1.98
1407 3347 7.295672 TCAAAATGGATAGAAGGGGATGTATCT 59.704 37.037 0.00 0.00 0.00 1.98
1408 3348 7.461749 TCAAAATGGATAGAAGGGGATGTATC 58.538 38.462 0.00 0.00 0.00 2.24
1409 3349 7.406620 TCAAAATGGATAGAAGGGGATGTAT 57.593 36.000 0.00 0.00 0.00 2.29
1410 3350 6.840090 TCAAAATGGATAGAAGGGGATGTA 57.160 37.500 0.00 0.00 0.00 2.29
1411 3351 5.732331 TCAAAATGGATAGAAGGGGATGT 57.268 39.130 0.00 0.00 0.00 3.06
1412 3352 6.208204 GTCATCAAAATGGATAGAAGGGGATG 59.792 42.308 0.00 0.00 33.42 3.51
1413 3353 6.126097 TGTCATCAAAATGGATAGAAGGGGAT 60.126 38.462 0.00 0.00 33.42 3.85
1414 3354 5.193527 TGTCATCAAAATGGATAGAAGGGGA 59.806 40.000 0.00 0.00 33.42 4.81
1415 3355 5.448654 TGTCATCAAAATGGATAGAAGGGG 58.551 41.667 0.00 0.00 33.42 4.79
1416 3356 6.604795 ACTTGTCATCAAAATGGATAGAAGGG 59.395 38.462 0.00 0.00 33.42 3.95
1417 3357 7.636150 ACTTGTCATCAAAATGGATAGAAGG 57.364 36.000 0.00 0.00 33.42 3.46
1421 3361 9.956720 GGAAATACTTGTCATCAAAATGGATAG 57.043 33.333 0.00 0.00 33.42 2.08
1422 3362 8.620416 CGGAAATACTTGTCATCAAAATGGATA 58.380 33.333 0.00 0.00 33.42 2.59
1423 3363 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
1424 3364 6.127758 CCGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
1425 3365 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
1426 3366 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
1427 3367 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
1428 3368 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
1429 3369 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
1430 3370 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
1431 3371 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
1432 3372 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
1433 3373 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
1434 3374 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
1435 3375 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1436 3376 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1437 3377 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1438 3378 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
1439 3379 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
1440 3380 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
1441 3381 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
1442 3382 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
1443 3383 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
1444 3384 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
1445 3385 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
1446 3386 0.179009 TACATACTCCCTCCGTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
1447 3387 0.950116 GTACATACTCCCTCCGTCCG 59.050 60.000 0.00 0.00 0.00 4.79
1448 3388 2.062971 TGTACATACTCCCTCCGTCC 57.937 55.000 0.00 0.00 0.00 4.79
1449 3389 4.159135 TCTTTTGTACATACTCCCTCCGTC 59.841 45.833 0.00 0.00 0.00 4.79
1450 3390 4.091549 TCTTTTGTACATACTCCCTCCGT 58.908 43.478 0.00 0.00 0.00 4.69
1451 3391 4.730949 TCTTTTGTACATACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
1452 3392 6.107343 GTCTTCTTTTGTACATACTCCCTCC 58.893 44.000 0.00 0.00 0.00 4.30
1453 3393 6.698380 TGTCTTCTTTTGTACATACTCCCTC 58.302 40.000 0.00 0.00 0.00 4.30
1454 3394 6.681729 TGTCTTCTTTTGTACATACTCCCT 57.318 37.500 0.00 0.00 0.00 4.20
1455 3395 7.923414 ATTGTCTTCTTTTGTACATACTCCC 57.077 36.000 0.00 0.00 0.00 4.30
1456 3396 9.220767 AGAATTGTCTTCTTTTGTACATACTCC 57.779 33.333 0.00 0.00 0.00 3.85
1475 3415 9.252962 CTGCAGATAACAAAAAGAAAGAATTGT 57.747 29.630 8.42 0.00 37.59 2.71
1476 3416 9.467258 TCTGCAGATAACAAAAAGAAAGAATTG 57.533 29.630 13.74 0.00 0.00 2.32
1580 3520 9.237846 GAAGGAAAATTGTCAACAAGTTAAGAG 57.762 33.333 8.76 0.00 42.38 2.85
1582 3522 7.978975 TGGAAGGAAAATTGTCAACAAGTTAAG 59.021 33.333 8.76 0.00 42.38 1.85
1583 3523 7.841956 TGGAAGGAAAATTGTCAACAAGTTAA 58.158 30.769 8.76 0.00 42.38 2.01
1584 3524 7.411486 TGGAAGGAAAATTGTCAACAAGTTA 57.589 32.000 8.76 0.00 42.38 2.24
1585 3525 6.293004 TGGAAGGAAAATTGTCAACAAGTT 57.707 33.333 2.95 2.95 44.67 2.66
1702 3898 8.790718 ACCGGTACAACTAGATATACAGTATTG 58.209 37.037 4.49 0.00 0.00 1.90
1763 3988 3.187842 GGGAAATCGTGTGTTGTAGAACC 59.812 47.826 0.00 0.00 0.00 3.62
1772 3997 3.056393 TGACTTATCGGGAAATCGTGTGT 60.056 43.478 0.00 0.00 0.00 3.72
1774 3999 3.880047 TGACTTATCGGGAAATCGTGT 57.120 42.857 0.00 0.00 0.00 4.49
1785 4251 8.994429 ATCATAGATTAAGGCTTGACTTATCG 57.006 34.615 10.69 0.56 33.31 2.92
1816 4286 2.512692 TGCAACCATGAAGCCATAGT 57.487 45.000 0.00 0.00 0.00 2.12
1819 4289 2.154567 AGATGCAACCATGAAGCCAT 57.845 45.000 0.00 0.00 0.00 4.40
1842 4327 3.972502 CGCATTGCATGTATCATTCTGTG 59.027 43.478 9.69 0.00 0.00 3.66
1898 4383 1.199558 AGGCGAGAAGTCTTCACGTAC 59.800 52.381 26.20 20.61 43.97 3.67
2061 4555 3.241701 GAAAATCGAAGCATTTTCCGCA 58.758 40.909 9.74 0.00 42.99 5.69
2062 4556 3.888886 GAAAATCGAAGCATTTTCCGC 57.111 42.857 9.74 0.00 42.99 5.54
2074 4568 4.156373 TGCAAGCATGAATCAGAAAATCGA 59.844 37.500 0.00 0.00 0.00 3.59
2118 4616 8.903820 ACACATGCACGCTATATATTAGATCTA 58.096 33.333 0.00 0.00 0.00 1.98
2137 5492 4.576053 TGCTGGATTAAGTCATACACATGC 59.424 41.667 0.00 0.00 31.73 4.06
2158 5513 3.082548 GGGAGAAAGAGGGTTTTAGTGC 58.917 50.000 0.00 0.00 0.00 4.40
2200 7856 5.365619 CACAACCGGTTTCTTATATAGCCT 58.634 41.667 19.55 0.00 0.00 4.58
2215 7871 3.115892 ACGTATGCGCACAACCGG 61.116 61.111 14.90 0.00 42.83 5.28
2228 7884 7.519032 AAAGATTGAGGGAAAAATTCACGTA 57.481 32.000 0.00 0.00 38.39 3.57
2266 7924 9.331282 CATAAACAATCCAAAAACACCCTTTAA 57.669 29.630 0.00 0.00 0.00 1.52
2298 7956 6.809630 AGTTTCTTCCTAAGTTCTTGCATC 57.190 37.500 0.00 0.00 0.00 3.91
2325 7983 7.933577 CCAATTCCATAAGTAGCATCTAAGACA 59.066 37.037 0.00 0.00 0.00 3.41
2425 8088 4.276058 AGGGAGCAAATGAACAAATTGG 57.724 40.909 0.00 0.00 0.00 3.16
2435 8098 3.615834 GCTGGAAAAGAAGGGAGCAAATG 60.616 47.826 0.00 0.00 0.00 2.32
2530 8193 5.831997 AGAAACAAATTGTGCTAACAGACC 58.168 37.500 0.00 0.00 37.67 3.85
2626 8357 8.585471 AATAGAAACTCATGATCCACATTTGT 57.415 30.769 0.00 0.00 37.07 2.83
2890 8653 5.338632 TGACCCGATATGTACAATAGGGAT 58.661 41.667 27.14 17.85 40.67 3.85
2948 8711 8.893219 TCATCACAGATTCAGGTATTGTTATC 57.107 34.615 0.00 0.00 0.00 1.75
2960 8723 4.777463 AGTCATGCATCATCACAGATTCA 58.223 39.130 0.00 0.00 0.00 2.57
3139 9302 4.209703 GTGAAACAAATGTTGACTGGCATG 59.790 41.667 0.00 0.00 38.44 4.06
3164 9329 6.099990 TGGAAAATATGTTGATCCCATGCAAT 59.900 34.615 0.00 0.00 0.00 3.56
3228 9397 5.754782 TGCATCAGGTTACAATAAGACCAT 58.245 37.500 0.00 0.00 35.89 3.55
3255 9424 4.497473 TTTCGCCATTTCCTTTACACAG 57.503 40.909 0.00 0.00 0.00 3.66
3259 9428 5.120053 CACCATTTTTCGCCATTTCCTTTAC 59.880 40.000 0.00 0.00 0.00 2.01
3431 9601 2.421424 AGAAAGATTGCACATTCGGAGC 59.579 45.455 0.00 0.00 0.00 4.70
3459 9629 7.117667 CCTGGGCTATTTTGAATTAACAACAAC 59.882 37.037 0.00 0.00 0.00 3.32
3464 9634 7.382898 GTTTCCTGGGCTATTTTGAATTAACA 58.617 34.615 0.00 0.00 0.00 2.41
3465 9635 6.530181 CGTTTCCTGGGCTATTTTGAATTAAC 59.470 38.462 0.00 0.00 0.00 2.01
3475 9645 0.899720 TCGACGTTTCCTGGGCTATT 59.100 50.000 0.00 0.00 0.00 1.73
3482 9652 6.642683 ACATTTTATAGTCGACGTTTCCTG 57.357 37.500 10.46 6.66 0.00 3.86
3483 9653 8.761575 TTTACATTTTATAGTCGACGTTTCCT 57.238 30.769 10.46 0.00 0.00 3.36
3510 9681 5.047377 ACATTGTTGGGCGATAAAGAATTGT 60.047 36.000 0.00 0.00 0.00 2.71
3590 9850 4.997395 ACTGACGTTGCACTTAATTCATCT 59.003 37.500 0.00 0.00 0.00 2.90
3623 9883 7.861872 GGTTTTTGCATGCACAATTCTAAAATT 59.138 29.630 22.58 0.00 35.43 1.82
3631 9896 4.978083 TTTGGTTTTTGCATGCACAATT 57.022 31.818 22.58 0.00 0.00 2.32
3696 9961 6.957920 TTTCATCTGATTGTTTTCTGGTGA 57.042 33.333 0.00 0.00 34.19 4.02
3732 9997 4.640771 AGAAGCAAGATGGGTTTCACTA 57.359 40.909 0.00 0.00 0.00 2.74
3736 10001 5.459536 AGAAAAGAAGCAAGATGGGTTTC 57.540 39.130 0.00 0.00 0.00 2.78
3740 10005 4.335037 GCTCTAGAAAAGAAGCAAGATGGG 59.665 45.833 0.00 0.00 32.46 4.00
3756 10021 5.047802 TGCATCGATTGATATGTGCTCTAGA 60.048 40.000 0.00 0.00 32.18 2.43
3834 10109 5.707931 CTGCGAGAAGAGATATGCATCTTA 58.292 41.667 0.19 0.00 41.78 2.10
3839 10114 1.685517 AGCTGCGAGAAGAGATATGCA 59.314 47.619 0.00 0.00 0.00 3.96
3880 10155 8.251026 AGACGACATGTAATCAGAATAACTTCA 58.749 33.333 0.00 0.00 33.56 3.02
3950 10225 1.626356 TTCCCGGGATCCTCAAGCTG 61.626 60.000 27.48 0.00 0.00 4.24
4018 10293 6.926630 AACATTAGGGCAAGAATTTGGTTA 57.073 33.333 0.00 0.00 34.79 2.85
4027 10302 7.939039 CCTGAAAGATATAACATTAGGGCAAGA 59.061 37.037 0.00 0.00 34.07 3.02
4131 10414 5.699915 CCTGCCAGTATAACTCTCATTGATG 59.300 44.000 0.00 0.00 0.00 3.07
4299 10666 2.884639 ACCGCTGCTTTCTGTGTTTAAT 59.115 40.909 0.00 0.00 0.00 1.40
4306 10678 1.276421 AGATGTACCGCTGCTTTCTGT 59.724 47.619 0.00 0.00 0.00 3.41
4334 10706 4.040952 ACCTTCACTGTGCTCTCAAGTATT 59.959 41.667 2.12 0.00 0.00 1.89
4413 10785 0.110104 AGTTGCTCCTTGCTGCTCTT 59.890 50.000 0.00 0.00 43.37 2.85
4454 10826 0.698238 GCCCCAGGTCATATATGCCA 59.302 55.000 21.03 0.54 0.00 4.92
4604 10985 4.901849 TGTAGCAGTAGCATCTTCCCTTAT 59.098 41.667 0.00 0.00 45.49 1.73
4634 11015 7.893124 AATCACATTAGCTTCAGATTTCCAT 57.107 32.000 0.00 0.00 0.00 3.41
4683 11066 4.246712 ACTTCAGATTTCCTGCATCCAT 57.753 40.909 0.00 0.00 42.62 3.41
4723 11106 3.368843 CCACTGGATCAGAAGACATCGTT 60.369 47.826 1.59 0.00 35.18 3.85
4733 11116 1.496060 ATAACCGCCACTGGATCAGA 58.504 50.000 0.00 0.00 35.18 3.27
4751 11134 1.377725 CCCGACTTGGCAGCTCAAT 60.378 57.895 0.00 0.00 35.87 2.57
4866 11250 7.927629 CAGCTACCATTTGCAAATACCAATATT 59.072 33.333 23.69 4.26 32.01 1.28
4883 11267 2.862541 TCAACACAAAGCAGCTACCAT 58.137 42.857 0.00 0.00 0.00 3.55
4910 11294 9.567848 TCAAAAGAACACAAACATTAGTTTCTC 57.432 29.630 0.00 0.00 45.80 2.87
4983 11367 7.765695 AAAAACCTCTTCATCTAATGCTTCA 57.234 32.000 0.00 0.00 0.00 3.02
5041 11431 2.649245 ATAGCGCGCTGATCTGGCAA 62.649 55.000 41.85 20.52 0.00 4.52
5054 11444 1.739067 AGTGAAACCCTTCATAGCGC 58.261 50.000 0.00 0.00 43.39 5.92
5055 11445 4.504858 ACTAAGTGAAACCCTTCATAGCG 58.495 43.478 0.00 0.00 43.39 4.26
5059 11449 7.417456 GGTGAAAAACTAAGTGAAACCCTTCAT 60.417 37.037 0.00 0.00 43.39 2.57
5083 11473 2.390225 TGTTGGCCCAGTAAATTGGT 57.610 45.000 0.00 0.00 36.45 3.67
5090 11480 5.450818 AATAAGAAGATGTTGGCCCAGTA 57.549 39.130 0.00 0.00 0.00 2.74
5101 11491 9.859427 TTGCCATTTTCACTAAATAAGAAGATG 57.141 29.630 0.00 0.00 34.69 2.90
5156 11549 5.297029 GGGATGTTACAATGCTACTTTCCTC 59.703 44.000 0.00 0.00 0.00 3.71
5214 11607 9.874205 CCATTTTTACAGATAATCCATGTTGTT 57.126 29.630 0.00 0.00 0.00 2.83
5215 11608 9.034800 ACCATTTTTACAGATAATCCATGTTGT 57.965 29.630 0.00 0.00 0.00 3.32
5216 11609 9.520204 GACCATTTTTACAGATAATCCATGTTG 57.480 33.333 0.00 0.00 0.00 3.33
5217 11610 8.695456 GGACCATTTTTACAGATAATCCATGTT 58.305 33.333 0.00 0.00 0.00 2.71
5218 11611 7.838696 TGGACCATTTTTACAGATAATCCATGT 59.161 33.333 0.00 0.00 0.00 3.21
5219 11612 8.236585 TGGACCATTTTTACAGATAATCCATG 57.763 34.615 0.00 0.00 0.00 3.66
5220 11613 8.863086 CATGGACCATTTTTACAGATAATCCAT 58.137 33.333 3.52 0.00 32.67 3.41
5221 11614 7.287466 CCATGGACCATTTTTACAGATAATCCA 59.713 37.037 5.56 0.00 0.00 3.41
5222 11615 7.661040 CCATGGACCATTTTTACAGATAATCC 58.339 38.462 5.56 0.00 0.00 3.01
5223 11616 7.147976 GCCATGGACCATTTTTACAGATAATC 58.852 38.462 18.40 0.00 0.00 1.75
5224 11617 6.239008 CGCCATGGACCATTTTTACAGATAAT 60.239 38.462 18.40 0.00 0.00 1.28
5225 11618 5.067153 CGCCATGGACCATTTTTACAGATAA 59.933 40.000 18.40 0.00 0.00 1.75
5226 11619 4.578516 CGCCATGGACCATTTTTACAGATA 59.421 41.667 18.40 0.00 0.00 1.98
5227 11620 3.381272 CGCCATGGACCATTTTTACAGAT 59.619 43.478 18.40 0.00 0.00 2.90
5228 11621 2.752354 CGCCATGGACCATTTTTACAGA 59.248 45.455 18.40 0.00 0.00 3.41
5229 11622 2.752354 TCGCCATGGACCATTTTTACAG 59.248 45.455 18.40 0.00 0.00 2.74
5230 11623 2.490115 GTCGCCATGGACCATTTTTACA 59.510 45.455 18.40 0.00 0.00 2.41
5231 11624 3.145212 GTCGCCATGGACCATTTTTAC 57.855 47.619 18.40 0.00 0.00 2.01
5240 11633 1.084289 GTTGTAAGGTCGCCATGGAC 58.916 55.000 18.40 5.31 36.18 4.02
5249 11642 5.049612 GGCTTTTCTGTAGTGTTGTAAGGTC 60.050 44.000 0.00 0.00 0.00 3.85
5251 11644 5.063880 AGGCTTTTCTGTAGTGTTGTAAGG 58.936 41.667 0.00 0.00 0.00 2.69
5263 11657 6.716628 TGTCATTCAATAAGAGGCTTTTCTGT 59.283 34.615 0.00 0.00 0.00 3.41
5266 11660 6.071952 TGGTGTCATTCAATAAGAGGCTTTTC 60.072 38.462 0.00 0.00 0.00 2.29
5340 12315 8.314021 TCATATGCGATTACCTCTTTATGACAT 58.686 33.333 0.00 0.00 0.00 3.06
5345 12320 9.561069 AAAACTCATATGCGATTACCTCTTTAT 57.439 29.630 0.00 0.00 0.00 1.40
5355 12492 9.817809 TTCTTCTAGTAAAACTCATATGCGATT 57.182 29.630 0.00 0.00 0.00 3.34
5376 12513 7.280205 ACCACCTGTGATATACGAATTTTCTTC 59.720 37.037 0.00 0.00 0.00 2.87
5382 12519 6.235231 AGAACCACCTGTGATATACGAATT 57.765 37.500 0.00 0.00 0.00 2.17
5416 12553 1.416401 CGATGGGGGTTAGTAGCACAT 59.584 52.381 0.00 0.00 0.00 3.21
5417 12554 0.828022 CGATGGGGGTTAGTAGCACA 59.172 55.000 0.00 0.00 0.00 4.57
5424 12561 1.673033 GCGATGATCGATGGGGGTTAG 60.673 57.143 20.25 0.00 43.74 2.34
5426 12563 1.071471 GCGATGATCGATGGGGGTT 59.929 57.895 20.25 0.00 43.74 4.11
5435 12572 1.783711 CCGAGAAAGAAGCGATGATCG 59.216 52.381 11.02 11.02 43.89 3.69
5440 12577 1.405821 ACGATCCGAGAAAGAAGCGAT 59.594 47.619 0.00 0.00 0.00 4.58
5458 12596 0.601558 TTTGGACGAAGAGGGAGACG 59.398 55.000 0.00 0.00 0.00 4.18
5469 12607 1.578897 TCCTGATGGGATTTGGACGA 58.421 50.000 0.00 0.00 39.58 4.20
5471 12611 3.372440 AGTTCCTGATGGGATTTGGAC 57.628 47.619 0.00 0.00 44.66 4.02
5489 12629 0.419459 ATGAGTGGAGGAGGGGAAGT 59.581 55.000 0.00 0.00 0.00 3.01
5511 12651 1.000955 GAAGAGGTGGAAGTGAAGCGA 59.999 52.381 0.00 0.00 0.00 4.93
5518 12660 1.352352 CATGGTGGAAGAGGTGGAAGT 59.648 52.381 0.00 0.00 0.00 3.01
5541 12683 2.570302 ACATGCCGAAGTAACCCTAGTT 59.430 45.455 0.00 0.00 40.15 2.24
5551 12693 2.047274 CGTCCCACATGCCGAAGT 60.047 61.111 0.00 0.00 0.00 3.01
5553 12695 2.264480 CTCGTCCCACATGCCGAA 59.736 61.111 0.00 0.00 0.00 4.30
5556 12698 2.125106 GTCCTCGTCCCACATGCC 60.125 66.667 0.00 0.00 0.00 4.40
5564 16430 0.392595 GGAATTGGTGGTCCTCGTCC 60.393 60.000 0.00 0.00 34.23 4.79
5600 17022 1.204704 TCCTGGCAATGTAGAGACACG 59.795 52.381 0.00 0.00 38.76 4.49
5605 17027 1.202627 GCTCCTCCTGGCAATGTAGAG 60.203 57.143 0.00 0.00 0.00 2.43
5607 17029 0.543277 TGCTCCTCCTGGCAATGTAG 59.457 55.000 0.00 0.00 35.40 2.74
5609 17031 1.216064 TATGCTCCTCCTGGCAATGT 58.784 50.000 0.00 0.00 41.90 2.71
5644 18529 5.726793 ACATTGGTAGTAGAAGATCAAGGGT 59.273 40.000 0.00 0.00 0.00 4.34
5655 18541 5.330233 TCCTCTTGTCACATTGGTAGTAGA 58.670 41.667 0.00 0.00 0.00 2.59
5661 18547 2.494059 CGTTCCTCTTGTCACATTGGT 58.506 47.619 0.00 0.00 0.00 3.67
5688 18688 1.162800 CGCCTCCTAGCTTTGGCATC 61.163 60.000 15.66 2.13 45.13 3.91
5690 18690 2.268920 CGCCTCCTAGCTTTGGCA 59.731 61.111 15.66 0.00 45.13 4.92
5731 19813 0.470766 ACTACAAAGGTCAACCCGCA 59.529 50.000 0.00 0.00 38.74 5.69
5736 19818 1.880027 CCTGCCACTACAAAGGTCAAC 59.120 52.381 0.00 0.00 0.00 3.18
5747 19829 1.915228 GAATGCCTCCCTGCCACTA 59.085 57.895 0.00 0.00 0.00 2.74
5774 21048 9.612066 ATTTAAAACACACAGAAAATGGTGATT 57.388 25.926 0.00 0.00 38.38 2.57
5786 21060 9.645059 TCTGAGATAGAGATTTAAAACACACAG 57.355 33.333 0.00 0.00 0.00 3.66
5826 21100 8.498358 GCCAATAAAAAGAAAGGTCAAAGATTG 58.502 33.333 0.00 0.00 0.00 2.67
5879 21384 4.345859 TGGTCATCAAGTCGGTTTTACT 57.654 40.909 0.00 0.00 0.00 2.24
5881 21386 4.900684 TCATGGTCATCAAGTCGGTTTTA 58.099 39.130 0.00 0.00 0.00 1.52
5914 21419 5.714333 AGCACTACCAGAGATATGTCCATAG 59.286 44.000 0.00 0.00 0.00 2.23
5916 21421 4.487804 AGCACTACCAGAGATATGTCCAT 58.512 43.478 0.00 0.00 0.00 3.41
5917 21422 3.916035 AGCACTACCAGAGATATGTCCA 58.084 45.455 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.