Multiple sequence alignment - TraesCS5A01G557600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G557600 chr5A 100.000 2357 0 0 1 2357 708450922 708453278 0.000000e+00 4353.0
1 TraesCS5A01G557600 chr5A 93.617 94 6 0 648 741 702581603 702581696 8.780000e-30 141.0
2 TraesCS5A01G557600 chr4B 83.943 1613 207 26 791 2357 670455888 670457494 0.000000e+00 1496.0
3 TraesCS5A01G557600 chr4B 80.909 330 49 11 267 595 390833685 390834001 5.030000e-62 248.0
4 TraesCS5A01G557600 chr4B 80.180 333 51 12 267 598 25449785 25449467 3.920000e-58 235.0
5 TraesCS5A01G557600 chr4B 90.654 107 9 1 641 747 621424690 621424795 8.780000e-30 141.0
6 TraesCS5A01G557600 chrUn 90.323 341 29 3 2020 2356 29191766 29191426 5.980000e-121 444.0
7 TraesCS5A01G557600 chrUn 85.915 426 27 14 379 794 29210397 29209995 7.790000e-115 424.0
8 TraesCS5A01G557600 chrUn 90.164 305 27 1 1006 1310 29204184 29203883 6.110000e-106 394.0
9 TraesCS5A01G557600 chrUn 90.521 211 15 3 1548 1753 29203883 29203673 8.300000e-70 274.0
10 TraesCS5A01G557600 chrUn 91.304 115 10 0 795 909 29206155 29206041 8.720000e-35 158.0
11 TraesCS5A01G557600 chrUn 97.674 43 1 0 142 184 29217409 29217451 9.030000e-10 75.0
12 TraesCS5A01G557600 chrUn 97.059 34 0 1 150 182 29210433 29210400 3.270000e-04 56.5
13 TraesCS5A01G557600 chr3D 85.285 333 32 9 267 595 584060320 584060639 6.280000e-86 327.0
14 TraesCS5A01G557600 chr3D 95.070 142 6 1 1 141 158288821 158288962 3.050000e-54 222.0
15 TraesCS5A01G557600 chr3D 93.333 150 7 2 1 149 83889470 83889617 3.940000e-53 219.0
16 TraesCS5A01G557600 chr2B 82.622 328 43 10 269 595 415378940 415379254 6.420000e-71 278.0
17 TraesCS5A01G557600 chr2B 91.837 98 8 0 644 741 63293087 63293184 1.140000e-28 137.0
18 TraesCS5A01G557600 chr1B 80.909 330 48 13 267 595 669884918 669885233 1.810000e-61 246.0
19 TraesCS5A01G557600 chr1B 92.405 158 7 5 1 154 580156410 580156566 1.100000e-53 220.0
20 TraesCS5A01G557600 chr6B 80.000 330 53 10 267 595 612630952 612631269 5.070000e-57 231.0
21 TraesCS5A01G557600 chr1D 95.833 144 5 1 1 143 309072105 309071962 5.070000e-57 231.0
22 TraesCS5A01G557600 chr2A 95.745 141 5 1 1 140 468334456 468334596 2.360000e-55 226.0
23 TraesCS5A01G557600 chr3B 94.521 146 7 1 1 145 624847698 624847843 8.480000e-55 224.0
24 TraesCS5A01G557600 chr4A 93.878 147 8 1 1 146 35162196 35162050 1.100000e-53 220.0
25 TraesCS5A01G557600 chr7A 93.333 150 7 3 1 147 467422676 467422527 3.940000e-53 219.0
26 TraesCS5A01G557600 chr3A 92.258 155 10 2 1 154 596103509 596103662 3.940000e-53 219.0
27 TraesCS5A01G557600 chr5B 92.857 98 6 1 648 744 339290365 339290268 8.780000e-30 141.0
28 TraesCS5A01G557600 chr2D 93.617 94 6 0 648 741 260369995 260370088 8.780000e-30 141.0
29 TraesCS5A01G557600 chr5D 91.919 99 8 0 647 745 134782207 134782109 3.160000e-29 139.0
30 TraesCS5A01G557600 chr6D 91.089 101 9 0 641 741 200398707 200398807 1.140000e-28 137.0
31 TraesCS5A01G557600 chr4D 90.385 104 10 0 644 747 482704214 482704111 1.140000e-28 137.0
32 TraesCS5A01G557600 chr7B 88.393 112 12 1 633 744 588875027 588874917 1.470000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G557600 chr5A 708450922 708453278 2356 False 4353.0 4353 100.0000 1 2357 1 chr5A.!!$F2 2356
1 TraesCS5A01G557600 chr4B 670455888 670457494 1606 False 1496.0 1496 83.9430 791 2357 1 chr4B.!!$F3 1566
2 TraesCS5A01G557600 chrUn 29203673 29210433 6760 True 261.3 424 90.9926 150 1753 5 chrUn.!!$R2 1603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
610 619 0.178953 AGAAGCACACCCCTTGCAAT 60.179 50.0 0.0 0.0 42.83 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1457 7076 0.10104 GAACTGCACTGCAAGCACAA 59.899 50.0 9.24 0.0 38.41 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.859420 TCATACTACGCATGCACATAAAAT 57.141 33.333 19.57 0.00 0.00 1.82
24 25 7.954788 TCATACTACGCATGCACATAAAATA 57.045 32.000 19.57 0.00 0.00 1.40
25 26 8.017587 TCATACTACGCATGCACATAAAATAG 57.982 34.615 19.57 7.85 0.00 1.73
26 27 7.655732 TCATACTACGCATGCACATAAAATAGT 59.344 33.333 19.57 12.65 0.00 2.12
27 28 8.921670 CATACTACGCATGCACATAAAATAGTA 58.078 33.333 19.57 14.15 0.00 1.82
28 29 7.962964 ACTACGCATGCACATAAAATAGTAT 57.037 32.000 19.57 0.00 0.00 2.12
30 31 9.653287 ACTACGCATGCACATAAAATAGTATAT 57.347 29.630 19.57 0.00 0.00 0.86
32 33 7.675478 ACGCATGCACATAAAATAGTATATCG 58.325 34.615 19.57 0.00 0.00 2.92
33 34 7.119360 CGCATGCACATAAAATAGTATATCGG 58.881 38.462 19.57 0.00 0.00 4.18
34 35 7.010091 CGCATGCACATAAAATAGTATATCGGA 59.990 37.037 19.57 0.00 0.00 4.55
35 36 8.331022 GCATGCACATAAAATAGTATATCGGAG 58.669 37.037 14.21 0.00 0.00 4.63
36 37 9.371136 CATGCACATAAAATAGTATATCGGAGT 57.629 33.333 0.00 0.00 0.00 3.85
38 39 9.850628 TGCACATAAAATAGTATATCGGAGTAC 57.149 33.333 0.00 0.00 0.00 2.73
55 56 9.790344 ATCGGAGTACTAATTAGCTACTAGAAA 57.210 33.333 19.17 11.04 0.00 2.52
56 57 9.790344 TCGGAGTACTAATTAGCTACTAGAAAT 57.210 33.333 19.17 0.00 0.00 2.17
69 70 7.797819 AGCTACTAGAAATAAATGCAATACGC 58.202 34.615 0.00 0.00 42.89 4.42
70 71 7.015877 GCTACTAGAAATAAATGCAATACGCC 58.984 38.462 0.00 0.00 41.33 5.68
71 72 6.313744 ACTAGAAATAAATGCAATACGCCC 57.686 37.500 0.00 0.00 41.33 6.13
72 73 6.062095 ACTAGAAATAAATGCAATACGCCCT 58.938 36.000 0.00 0.00 41.33 5.19
73 74 7.221450 ACTAGAAATAAATGCAATACGCCCTA 58.779 34.615 0.00 0.00 41.33 3.53
74 75 6.952773 AGAAATAAATGCAATACGCCCTAA 57.047 33.333 0.00 0.00 41.33 2.69
75 76 7.341445 AGAAATAAATGCAATACGCCCTAAA 57.659 32.000 0.00 0.00 41.33 1.85
76 77 7.200455 AGAAATAAATGCAATACGCCCTAAAC 58.800 34.615 0.00 0.00 41.33 2.01
77 78 3.793797 AAATGCAATACGCCCTAAACC 57.206 42.857 0.00 0.00 41.33 3.27
78 79 2.729028 ATGCAATACGCCCTAAACCT 57.271 45.000 0.00 0.00 41.33 3.50
79 80 2.500392 TGCAATACGCCCTAAACCTT 57.500 45.000 0.00 0.00 41.33 3.50
80 81 2.088423 TGCAATACGCCCTAAACCTTG 58.912 47.619 0.00 0.00 41.33 3.61
81 82 2.089201 GCAATACGCCCTAAACCTTGT 58.911 47.619 0.00 0.00 32.94 3.16
82 83 2.096980 GCAATACGCCCTAAACCTTGTC 59.903 50.000 0.00 0.00 32.94 3.18
83 84 3.606687 CAATACGCCCTAAACCTTGTCT 58.393 45.455 0.00 0.00 0.00 3.41
84 85 4.761975 CAATACGCCCTAAACCTTGTCTA 58.238 43.478 0.00 0.00 0.00 2.59
85 86 5.365619 CAATACGCCCTAAACCTTGTCTAT 58.634 41.667 0.00 0.00 0.00 1.98
86 87 3.994931 ACGCCCTAAACCTTGTCTATT 57.005 42.857 0.00 0.00 0.00 1.73
87 88 3.606687 ACGCCCTAAACCTTGTCTATTG 58.393 45.455 0.00 0.00 0.00 1.90
88 89 3.008704 ACGCCCTAAACCTTGTCTATTGT 59.991 43.478 0.00 0.00 0.00 2.71
89 90 3.374058 CGCCCTAAACCTTGTCTATTGTG 59.626 47.826 0.00 0.00 0.00 3.33
90 91 4.585879 GCCCTAAACCTTGTCTATTGTGA 58.414 43.478 0.00 0.00 0.00 3.58
91 92 5.007682 GCCCTAAACCTTGTCTATTGTGAA 58.992 41.667 0.00 0.00 0.00 3.18
92 93 5.475564 GCCCTAAACCTTGTCTATTGTGAAA 59.524 40.000 0.00 0.00 0.00 2.69
93 94 6.015772 GCCCTAAACCTTGTCTATTGTGAAAA 60.016 38.462 0.00 0.00 0.00 2.29
94 95 7.368059 CCCTAAACCTTGTCTATTGTGAAAAC 58.632 38.462 0.00 0.00 0.00 2.43
95 96 7.013846 CCCTAAACCTTGTCTATTGTGAAAACA 59.986 37.037 0.00 0.00 0.00 2.83
96 97 7.860872 CCTAAACCTTGTCTATTGTGAAAACAC 59.139 37.037 0.00 0.00 0.00 3.32
97 98 6.767524 AACCTTGTCTATTGTGAAAACACA 57.232 33.333 0.00 0.00 0.00 3.72
98 99 6.131544 ACCTTGTCTATTGTGAAAACACAC 57.868 37.500 2.48 0.00 40.68 3.82
99 100 5.204833 CCTTGTCTATTGTGAAAACACACG 58.795 41.667 2.48 0.00 42.86 4.49
100 101 4.203950 TGTCTATTGTGAAAACACACGC 57.796 40.909 2.48 0.00 42.86 5.34
101 102 3.623510 TGTCTATTGTGAAAACACACGCA 59.376 39.130 2.48 0.00 42.86 5.24
102 103 4.095036 TGTCTATTGTGAAAACACACGCAA 59.905 37.500 2.48 0.00 42.86 4.85
103 104 5.031578 GTCTATTGTGAAAACACACGCAAA 58.968 37.500 2.48 0.00 42.86 3.68
104 105 5.685511 GTCTATTGTGAAAACACACGCAAAT 59.314 36.000 2.48 0.00 42.86 2.32
105 106 6.198216 GTCTATTGTGAAAACACACGCAAATT 59.802 34.615 2.48 0.00 42.86 1.82
106 107 5.793026 ATTGTGAAAACACACGCAAATTT 57.207 30.435 2.48 0.00 42.86 1.82
107 108 6.893958 ATTGTGAAAACACACGCAAATTTA 57.106 29.167 2.48 0.00 42.86 1.40
108 109 6.706055 TTGTGAAAACACACGCAAATTTAA 57.294 29.167 2.48 0.00 42.86 1.52
109 110 6.083925 TGTGAAAACACACGCAAATTTAAC 57.916 33.333 0.00 0.00 42.86 2.01
110 111 5.864474 TGTGAAAACACACGCAAATTTAACT 59.136 32.000 0.00 0.00 42.86 2.24
111 112 6.175087 GTGAAAACACACGCAAATTTAACTG 58.825 36.000 0.00 0.00 0.00 3.16
112 113 5.864474 TGAAAACACACGCAAATTTAACTGT 59.136 32.000 0.00 0.00 0.00 3.55
113 114 5.694674 AAACACACGCAAATTTAACTGTG 57.305 34.783 14.97 14.97 36.03 3.66
114 115 3.112580 ACACACGCAAATTTAACTGTGC 58.887 40.909 15.90 0.00 33.75 4.57
115 116 2.470999 CACACGCAAATTTAACTGTGCC 59.529 45.455 2.62 0.00 33.33 5.01
116 117 2.360801 ACACGCAAATTTAACTGTGCCT 59.639 40.909 2.62 0.00 33.33 4.75
117 118 3.181480 ACACGCAAATTTAACTGTGCCTT 60.181 39.130 2.62 0.00 33.33 4.35
118 119 3.425193 CACGCAAATTTAACTGTGCCTTC 59.575 43.478 2.62 0.00 33.33 3.46
119 120 3.317993 ACGCAAATTTAACTGTGCCTTCT 59.682 39.130 2.62 0.00 33.33 2.85
120 121 4.517453 ACGCAAATTTAACTGTGCCTTCTA 59.483 37.500 2.62 0.00 33.33 2.10
121 122 5.009210 ACGCAAATTTAACTGTGCCTTCTAA 59.991 36.000 2.62 0.00 33.33 2.10
122 123 5.918011 CGCAAATTTAACTGTGCCTTCTAAA 59.082 36.000 2.62 0.00 33.33 1.85
123 124 6.129194 CGCAAATTTAACTGTGCCTTCTAAAC 60.129 38.462 2.62 0.00 33.33 2.01
124 125 6.923508 GCAAATTTAACTGTGCCTTCTAAACT 59.076 34.615 0.00 0.00 0.00 2.66
125 126 7.096065 GCAAATTTAACTGTGCCTTCTAAACTG 60.096 37.037 0.00 0.00 0.00 3.16
126 127 7.582667 AATTTAACTGTGCCTTCTAAACTGT 57.417 32.000 0.00 0.00 0.00 3.55
127 128 6.371809 TTTAACTGTGCCTTCTAAACTGTG 57.628 37.500 0.00 0.00 0.00 3.66
128 129 3.838244 ACTGTGCCTTCTAAACTGTGA 57.162 42.857 0.00 0.00 0.00 3.58
129 130 3.467803 ACTGTGCCTTCTAAACTGTGAC 58.532 45.455 0.00 0.00 0.00 3.67
130 131 2.476619 CTGTGCCTTCTAAACTGTGACG 59.523 50.000 0.00 0.00 0.00 4.35
131 132 1.798813 GTGCCTTCTAAACTGTGACGG 59.201 52.381 0.00 0.00 0.00 4.79
132 133 1.689813 TGCCTTCTAAACTGTGACGGA 59.310 47.619 0.00 0.00 0.00 4.69
133 134 2.288825 TGCCTTCTAAACTGTGACGGAG 60.289 50.000 0.00 0.00 0.00 4.63
134 135 2.931320 GCCTTCTAAACTGTGACGGAGG 60.931 54.545 0.00 0.00 0.00 4.30
135 136 2.299297 CCTTCTAAACTGTGACGGAGGT 59.701 50.000 0.00 0.00 0.00 3.85
136 137 3.508793 CCTTCTAAACTGTGACGGAGGTA 59.491 47.826 0.00 0.00 0.00 3.08
137 138 4.380655 CCTTCTAAACTGTGACGGAGGTAG 60.381 50.000 0.00 0.00 0.00 3.18
138 139 3.759581 TCTAAACTGTGACGGAGGTAGT 58.240 45.455 0.00 0.00 0.00 2.73
139 140 4.910195 TCTAAACTGTGACGGAGGTAGTA 58.090 43.478 0.00 0.00 0.00 1.82
140 141 3.930634 AAACTGTGACGGAGGTAGTAC 57.069 47.619 0.00 0.00 0.00 2.73
141 142 2.875094 ACTGTGACGGAGGTAGTACT 57.125 50.000 0.00 0.00 0.00 2.73
142 143 3.988976 ACTGTGACGGAGGTAGTACTA 57.011 47.619 0.00 0.00 0.00 1.82
143 144 3.604582 ACTGTGACGGAGGTAGTACTAC 58.395 50.000 22.53 22.53 35.40 2.73
144 145 3.262915 ACTGTGACGGAGGTAGTACTACT 59.737 47.826 27.71 16.29 36.36 2.57
145 146 4.260170 CTGTGACGGAGGTAGTACTACTT 58.740 47.826 27.71 22.74 36.36 2.24
146 147 4.655963 TGTGACGGAGGTAGTACTACTTT 58.344 43.478 27.71 18.31 36.36 2.66
147 148 4.697352 TGTGACGGAGGTAGTACTACTTTC 59.303 45.833 27.71 23.61 36.36 2.62
148 149 4.940654 GTGACGGAGGTAGTACTACTTTCT 59.059 45.833 27.71 18.47 36.36 2.52
179 180 1.539065 CCTACTGAGCGCCGATCAATT 60.539 52.381 6.49 0.00 0.00 2.32
180 181 2.288213 CCTACTGAGCGCCGATCAATTA 60.288 50.000 6.49 0.00 0.00 1.40
182 183 1.933853 ACTGAGCGCCGATCAATTAAC 59.066 47.619 6.49 0.00 0.00 2.01
183 184 1.933181 CTGAGCGCCGATCAATTAACA 59.067 47.619 6.49 0.00 0.00 2.41
184 185 2.545526 CTGAGCGCCGATCAATTAACAT 59.454 45.455 6.49 0.00 0.00 2.71
185 186 2.942376 TGAGCGCCGATCAATTAACATT 59.058 40.909 1.00 0.00 0.00 2.71
186 187 3.376859 TGAGCGCCGATCAATTAACATTT 59.623 39.130 1.00 0.00 0.00 2.32
187 188 3.694734 AGCGCCGATCAATTAACATTTG 58.305 40.909 2.29 0.00 0.00 2.32
188 189 2.216263 GCGCCGATCAATTAACATTTGC 59.784 45.455 0.00 0.00 0.00 3.68
189 190 3.433709 CGCCGATCAATTAACATTTGCA 58.566 40.909 0.00 0.00 0.00 4.08
190 191 4.043750 CGCCGATCAATTAACATTTGCAT 58.956 39.130 0.00 0.00 0.00 3.96
191 192 4.503734 CGCCGATCAATTAACATTTGCATT 59.496 37.500 0.00 0.00 0.00 3.56
192 193 5.554883 CGCCGATCAATTAACATTTGCATTG 60.555 40.000 0.00 0.00 0.00 2.82
193 194 5.519566 GCCGATCAATTAACATTTGCATTGA 59.480 36.000 4.32 1.24 39.39 2.57
194 195 6.035866 GCCGATCAATTAACATTTGCATTGAA 59.964 34.615 4.32 0.00 38.73 2.69
195 196 7.393327 CCGATCAATTAACATTTGCATTGAAC 58.607 34.615 4.32 0.00 38.73 3.18
196 197 7.063191 CCGATCAATTAACATTTGCATTGAACA 59.937 33.333 4.32 0.00 38.73 3.18
197 198 8.433893 CGATCAATTAACATTTGCATTGAACAA 58.566 29.630 4.32 0.00 38.73 2.83
204 205 9.926158 TTAACATTTGCATTGAACAATATCACT 57.074 25.926 4.32 0.00 0.00 3.41
205 206 8.836268 AACATTTGCATTGAACAATATCACTT 57.164 26.923 4.32 0.00 0.00 3.16
206 207 8.246908 ACATTTGCATTGAACAATATCACTTG 57.753 30.769 4.32 5.01 0.00 3.16
207 208 8.089597 ACATTTGCATTGAACAATATCACTTGA 58.910 29.630 4.32 0.00 0.00 3.02
208 209 7.872163 TTTGCATTGAACAATATCACTTGAC 57.128 32.000 0.00 0.00 0.00 3.18
209 210 5.953183 TGCATTGAACAATATCACTTGACC 58.047 37.500 0.00 0.00 0.00 4.02
210 211 5.105797 TGCATTGAACAATATCACTTGACCC 60.106 40.000 0.00 0.00 0.00 4.46
211 212 5.105797 GCATTGAACAATATCACTTGACCCA 60.106 40.000 0.00 0.00 0.00 4.51
212 213 6.406177 GCATTGAACAATATCACTTGACCCAT 60.406 38.462 0.00 0.00 0.00 4.00
213 214 6.513806 TTGAACAATATCACTTGACCCATG 57.486 37.500 0.00 0.00 0.00 3.66
214 215 5.569355 TGAACAATATCACTTGACCCATGT 58.431 37.500 0.00 0.00 0.00 3.21
215 216 5.415389 TGAACAATATCACTTGACCCATGTG 59.585 40.000 6.63 6.63 39.73 3.21
216 217 5.178096 ACAATATCACTTGACCCATGTGA 57.822 39.130 14.97 14.97 46.87 3.58
217 218 5.569355 ACAATATCACTTGACCCATGTGAA 58.431 37.500 16.08 8.84 46.28 3.18
218 219 6.009589 ACAATATCACTTGACCCATGTGAAA 58.990 36.000 16.08 0.22 46.28 2.69
219 220 6.071952 ACAATATCACTTGACCCATGTGAAAC 60.072 38.462 16.08 0.00 46.28 2.78
238 239 9.647797 TGTGAAACATAGTTCGTAAATATGACT 57.352 29.630 16.40 7.28 45.67 3.41
270 271 8.746052 TTATATATTCCAAAACAGGAGTGGTG 57.254 34.615 0.00 0.00 39.25 4.17
271 272 2.818751 TTCCAAAACAGGAGTGGTGT 57.181 45.000 0.00 0.00 39.25 4.16
272 273 2.818751 TCCAAAACAGGAGTGGTGTT 57.181 45.000 0.00 0.00 39.89 3.32
273 274 3.935818 TCCAAAACAGGAGTGGTGTTA 57.064 42.857 0.00 0.00 37.13 2.41
274 275 4.447138 TCCAAAACAGGAGTGGTGTTAT 57.553 40.909 0.00 0.00 37.13 1.89
275 276 4.798882 TCCAAAACAGGAGTGGTGTTATT 58.201 39.130 0.00 0.00 37.13 1.40
276 277 5.942961 TCCAAAACAGGAGTGGTGTTATTA 58.057 37.500 0.00 0.00 37.13 0.98
277 278 6.366340 TCCAAAACAGGAGTGGTGTTATTAA 58.634 36.000 0.00 0.00 37.13 1.40
278 279 7.007723 TCCAAAACAGGAGTGGTGTTATTAAT 58.992 34.615 0.00 0.00 37.13 1.40
279 280 7.507616 TCCAAAACAGGAGTGGTGTTATTAATT 59.492 33.333 0.00 0.00 37.13 1.40
280 281 7.812669 CCAAAACAGGAGTGGTGTTATTAATTC 59.187 37.037 0.00 0.00 37.13 2.17
281 282 7.462571 AAACAGGAGTGGTGTTATTAATTCC 57.537 36.000 0.00 0.00 37.13 3.01
282 283 6.134535 ACAGGAGTGGTGTTATTAATTCCA 57.865 37.500 0.00 0.00 0.00 3.53
283 284 6.548321 ACAGGAGTGGTGTTATTAATTCCAA 58.452 36.000 0.00 0.00 0.00 3.53
284 285 7.007723 ACAGGAGTGGTGTTATTAATTCCAAA 58.992 34.615 0.00 0.00 0.00 3.28
285 286 7.507616 ACAGGAGTGGTGTTATTAATTCCAAAA 59.492 33.333 0.00 0.00 0.00 2.44
286 287 8.364142 CAGGAGTGGTGTTATTAATTCCAAAAA 58.636 33.333 0.00 0.00 0.00 1.94
287 288 9.100197 AGGAGTGGTGTTATTAATTCCAAAAAT 57.900 29.630 0.00 0.00 0.00 1.82
293 294 9.051679 GGTGTTATTAATTCCAAAAATATGGGC 57.948 33.333 0.00 0.00 41.05 5.36
294 295 8.760569 GTGTTATTAATTCCAAAAATATGGGCG 58.239 33.333 0.00 0.00 41.05 6.13
295 296 8.478877 TGTTATTAATTCCAAAAATATGGGCGT 58.521 29.630 0.00 0.00 41.05 5.68
296 297 8.760569 GTTATTAATTCCAAAAATATGGGCGTG 58.239 33.333 0.00 0.00 41.05 5.34
297 298 4.817318 AATTCCAAAAATATGGGCGTGT 57.183 36.364 0.00 0.00 41.05 4.49
298 299 5.923733 AATTCCAAAAATATGGGCGTGTA 57.076 34.783 0.00 0.00 41.05 2.90
299 300 5.923733 ATTCCAAAAATATGGGCGTGTAA 57.076 34.783 0.00 0.00 41.05 2.41
300 301 5.923733 TTCCAAAAATATGGGCGTGTAAT 57.076 34.783 0.00 0.00 41.05 1.89
301 302 5.923733 TCCAAAAATATGGGCGTGTAATT 57.076 34.783 0.00 0.00 41.05 1.40
302 303 5.655488 TCCAAAAATATGGGCGTGTAATTG 58.345 37.500 0.00 0.00 41.05 2.32
303 304 4.269844 CCAAAAATATGGGCGTGTAATTGC 59.730 41.667 0.00 0.00 36.79 3.56
308 309 3.098555 GGCGTGTAATTGCCGAGG 58.901 61.111 8.20 0.00 42.22 4.63
309 310 1.448893 GGCGTGTAATTGCCGAGGA 60.449 57.895 8.20 0.00 42.22 3.71
310 311 1.022451 GGCGTGTAATTGCCGAGGAA 61.022 55.000 8.20 0.00 42.22 3.36
311 312 0.800012 GCGTGTAATTGCCGAGGAAA 59.200 50.000 8.20 0.00 0.00 3.13
312 313 1.400494 GCGTGTAATTGCCGAGGAAAT 59.600 47.619 8.20 0.00 0.00 2.17
313 314 2.538939 GCGTGTAATTGCCGAGGAAATC 60.539 50.000 8.20 0.00 0.00 2.17
314 315 2.675844 CGTGTAATTGCCGAGGAAATCA 59.324 45.455 0.00 0.00 0.00 2.57
315 316 3.485216 CGTGTAATTGCCGAGGAAATCAC 60.485 47.826 0.00 0.88 0.00 3.06
316 317 3.013921 TGTAATTGCCGAGGAAATCACC 58.986 45.455 0.00 0.00 0.00 4.02
317 318 2.514458 AATTGCCGAGGAAATCACCT 57.486 45.000 0.00 0.00 43.64 4.00
318 319 3.644966 AATTGCCGAGGAAATCACCTA 57.355 42.857 0.00 0.00 40.73 3.08
319 320 3.644966 ATTGCCGAGGAAATCACCTAA 57.355 42.857 0.00 0.00 40.73 2.69
320 321 2.691409 TGCCGAGGAAATCACCTAAG 57.309 50.000 0.00 0.00 40.73 2.18
321 322 2.184533 TGCCGAGGAAATCACCTAAGA 58.815 47.619 0.00 0.00 40.73 2.10
322 323 2.569853 TGCCGAGGAAATCACCTAAGAA 59.430 45.455 0.00 0.00 40.73 2.52
323 324 3.008594 TGCCGAGGAAATCACCTAAGAAA 59.991 43.478 0.00 0.00 40.73 2.52
324 325 4.200092 GCCGAGGAAATCACCTAAGAAAT 58.800 43.478 0.00 0.00 40.73 2.17
325 326 4.640647 GCCGAGGAAATCACCTAAGAAATT 59.359 41.667 0.00 0.00 40.73 1.82
326 327 5.820947 GCCGAGGAAATCACCTAAGAAATTA 59.179 40.000 0.00 0.00 40.73 1.40
327 328 6.486993 GCCGAGGAAATCACCTAAGAAATTAT 59.513 38.462 0.00 0.00 40.73 1.28
328 329 7.013369 GCCGAGGAAATCACCTAAGAAATTATT 59.987 37.037 0.00 0.00 40.73 1.40
329 330 9.555727 CCGAGGAAATCACCTAAGAAATTATTA 57.444 33.333 0.00 0.00 40.73 0.98
337 338 8.276252 TCACCTAAGAAATTATTACAAGTGGC 57.724 34.615 0.00 0.00 0.00 5.01
338 339 7.885922 TCACCTAAGAAATTATTACAAGTGGCA 59.114 33.333 0.00 0.00 0.00 4.92
339 340 7.968405 CACCTAAGAAATTATTACAAGTGGCAC 59.032 37.037 10.29 10.29 0.00 5.01
340 341 7.888546 ACCTAAGAAATTATTACAAGTGGCACT 59.111 33.333 15.88 15.88 0.00 4.40
341 342 8.184192 CCTAAGAAATTATTACAAGTGGCACTG 58.816 37.037 22.83 17.05 0.00 3.66
342 343 7.759489 AAGAAATTATTACAAGTGGCACTGA 57.241 32.000 22.83 7.00 0.00 3.41
343 344 7.383102 AGAAATTATTACAAGTGGCACTGAG 57.617 36.000 22.83 18.88 0.00 3.35
344 345 7.168219 AGAAATTATTACAAGTGGCACTGAGA 58.832 34.615 22.83 8.27 0.00 3.27
345 346 7.831193 AGAAATTATTACAAGTGGCACTGAGAT 59.169 33.333 22.83 14.74 0.00 2.75
346 347 7.559590 AATTATTACAAGTGGCACTGAGATC 57.440 36.000 22.83 0.00 0.00 2.75
347 348 4.833478 ATTACAAGTGGCACTGAGATCT 57.167 40.909 22.83 0.21 0.00 2.75
348 349 2.469274 ACAAGTGGCACTGAGATCTG 57.531 50.000 22.83 16.56 0.00 2.90
349 350 1.696336 ACAAGTGGCACTGAGATCTGT 59.304 47.619 22.83 17.25 0.00 3.41
350 351 2.105477 ACAAGTGGCACTGAGATCTGTT 59.895 45.455 22.83 0.00 0.00 3.16
351 352 2.469274 AGTGGCACTGAGATCTGTTG 57.531 50.000 21.37 0.00 0.00 3.33
352 353 1.696336 AGTGGCACTGAGATCTGTTGT 59.304 47.619 21.37 0.00 0.00 3.32
353 354 2.072298 GTGGCACTGAGATCTGTTGTC 58.928 52.381 11.13 0.00 0.00 3.18
354 355 1.693606 TGGCACTGAGATCTGTTGTCA 59.306 47.619 0.00 0.00 0.00 3.58
355 356 2.072298 GGCACTGAGATCTGTTGTCAC 58.928 52.381 0.00 0.00 0.00 3.67
356 357 2.548707 GGCACTGAGATCTGTTGTCACA 60.549 50.000 0.00 0.00 0.00 3.58
357 358 3.133691 GCACTGAGATCTGTTGTCACAA 58.866 45.455 0.00 0.00 30.36 3.33
358 359 3.561310 GCACTGAGATCTGTTGTCACAAA 59.439 43.478 0.00 0.00 30.36 2.83
359 360 4.035558 GCACTGAGATCTGTTGTCACAAAA 59.964 41.667 0.00 0.00 30.36 2.44
360 361 5.449041 GCACTGAGATCTGTTGTCACAAAAA 60.449 40.000 0.00 0.00 30.36 1.94
361 362 6.732154 CACTGAGATCTGTTGTCACAAAAAT 58.268 36.000 0.00 0.00 30.36 1.82
362 363 6.635641 CACTGAGATCTGTTGTCACAAAAATG 59.364 38.462 0.00 0.00 30.36 2.32
363 364 6.075762 TGAGATCTGTTGTCACAAAAATGG 57.924 37.500 0.00 0.00 30.36 3.16
364 365 5.593909 TGAGATCTGTTGTCACAAAAATGGT 59.406 36.000 0.00 0.00 30.36 3.55
365 366 6.770303 TGAGATCTGTTGTCACAAAAATGGTA 59.230 34.615 0.00 0.00 30.36 3.25
366 367 7.284261 TGAGATCTGTTGTCACAAAAATGGTAA 59.716 33.333 0.00 0.00 30.36 2.85
367 368 8.006298 AGATCTGTTGTCACAAAAATGGTAAA 57.994 30.769 0.00 0.00 30.36 2.01
368 369 7.920682 AGATCTGTTGTCACAAAAATGGTAAAC 59.079 33.333 0.00 0.00 30.36 2.01
369 370 6.925211 TCTGTTGTCACAAAAATGGTAAACA 58.075 32.000 0.00 0.00 30.36 2.83
370 371 7.378966 TCTGTTGTCACAAAAATGGTAAACAA 58.621 30.769 0.00 0.00 30.36 2.83
371 372 7.872993 TCTGTTGTCACAAAAATGGTAAACAAA 59.127 29.630 0.00 0.00 30.36 2.83
372 373 7.797819 TGTTGTCACAAAAATGGTAAACAAAC 58.202 30.769 0.00 0.00 30.09 2.93
373 374 7.441157 TGTTGTCACAAAAATGGTAAACAAACA 59.559 29.630 0.00 0.00 30.09 2.83
374 375 8.447053 GTTGTCACAAAAATGGTAAACAAACAT 58.553 29.630 0.00 0.00 30.09 2.71
375 376 8.553459 TGTCACAAAAATGGTAAACAAACATT 57.447 26.923 0.00 0.00 36.46 2.71
376 377 9.653287 TGTCACAAAAATGGTAAACAAACATTA 57.347 25.926 0.00 0.00 34.00 1.90
471 472 2.497273 GGCAAAAGTAACTGGGCATGAT 59.503 45.455 0.00 0.00 0.00 2.45
483 492 5.999044 ACTGGGCATGATATTATGAGATCC 58.001 41.667 11.46 7.03 0.00 3.36
550 559 8.734218 AACTATCTCATAACTTCGTAGTCTGA 57.266 34.615 0.00 1.66 31.99 3.27
582 591 8.999431 TGAACTTCAAAAGAACATCCTACATAC 58.001 33.333 0.00 0.00 0.00 2.39
583 592 7.923414 ACTTCAAAAGAACATCCTACATACC 57.077 36.000 0.00 0.00 0.00 2.73
600 609 4.275936 ACATACCAGTTGAAAGAAGCACAC 59.724 41.667 0.00 0.00 0.00 3.82
602 611 1.338020 CCAGTTGAAAGAAGCACACCC 59.662 52.381 0.00 0.00 0.00 4.61
603 612 1.338020 CAGTTGAAAGAAGCACACCCC 59.662 52.381 0.00 0.00 0.00 4.95
604 613 1.215423 AGTTGAAAGAAGCACACCCCT 59.785 47.619 0.00 0.00 0.00 4.79
605 614 2.031870 GTTGAAAGAAGCACACCCCTT 58.968 47.619 0.00 0.00 0.00 3.95
606 615 1.691196 TGAAAGAAGCACACCCCTTG 58.309 50.000 0.00 0.00 0.00 3.61
607 616 0.315251 GAAAGAAGCACACCCCTTGC 59.685 55.000 0.00 0.00 40.52 4.01
608 617 0.396974 AAAGAAGCACACCCCTTGCA 60.397 50.000 0.00 0.00 42.83 4.08
609 618 0.396974 AAGAAGCACACCCCTTGCAA 60.397 50.000 0.00 0.00 42.83 4.08
610 619 0.178953 AGAAGCACACCCCTTGCAAT 60.179 50.000 0.00 0.00 42.83 3.56
657 666 2.108168 TGGAAGAACATACTCCCTCCG 58.892 52.381 0.00 0.00 0.00 4.63
659 668 2.500504 GGAAGAACATACTCCCTCCGTT 59.499 50.000 0.00 0.00 0.00 4.44
661 670 3.103080 AGAACATACTCCCTCCGTTCT 57.897 47.619 0.00 0.00 41.01 3.01
668 677 7.427989 ACATACTCCCTCCGTTCTAAAATAA 57.572 36.000 0.00 0.00 0.00 1.40
676 685 6.395629 CCTCCGTTCTAAAATAAGTGTCTCA 58.604 40.000 0.00 0.00 0.00 3.27
677 686 6.872020 CCTCCGTTCTAAAATAAGTGTCTCAA 59.128 38.462 0.00 0.00 0.00 3.02
678 687 7.148623 CCTCCGTTCTAAAATAAGTGTCTCAAC 60.149 40.741 0.00 0.00 0.00 3.18
680 689 7.929785 TCCGTTCTAAAATAAGTGTCTCAACTT 59.070 33.333 0.00 0.00 42.89 2.66
681 690 8.557029 CCGTTCTAAAATAAGTGTCTCAACTTT 58.443 33.333 0.00 0.00 40.77 2.66
692 701 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
693 702 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
694 703 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
695 704 9.310716 GTGTCTCAACTTTGTACTAACTTTAGT 57.689 33.333 6.85 6.85 45.39 2.24
726 735 8.322091 AGTTGTATTAAGGCTGAGACACTTATT 58.678 33.333 0.00 0.00 0.00 1.40
730 739 9.162764 GTATTAAGGCTGAGACACTTATTTTGA 57.837 33.333 0.00 0.00 0.00 2.69
731 740 8.635765 ATTAAGGCTGAGACACTTATTTTGAA 57.364 30.769 0.00 0.00 0.00 2.69
741 750 4.517832 ACACTTATTTTGAAACGGAGGGAC 59.482 41.667 0.00 0.00 0.00 4.46
744 753 5.936372 ACTTATTTTGAAACGGAGGGACTAC 59.064 40.000 0.00 0.00 41.55 2.73
752 761 2.929641 ACGGAGGGACTACTAGCTTAC 58.070 52.381 0.00 0.00 41.55 2.34
775 784 9.799106 TTACAAGATCTCCTTTCAGAAGAAAAT 57.201 29.630 0.00 0.00 42.78 1.82
822 4672 2.489722 GTTGGGTTCTTGAAGATGGAGC 59.510 50.000 0.00 0.00 0.00 4.70
826 4676 2.489722 GGTTCTTGAAGATGGAGCCAAC 59.510 50.000 0.00 0.00 31.99 3.77
870 4720 1.000607 GGCCGAGTCGCATACAGATAA 60.001 52.381 7.12 0.00 0.00 1.75
911 4761 3.081133 CATGAGCACGTGTACGCC 58.919 61.111 18.38 0.00 44.43 5.68
913 4763 3.659089 ATGAGCACGTGTACGCCCC 62.659 63.158 18.38 0.00 44.43 5.80
938 4817 1.597027 CCCCACACACACCGTTCTC 60.597 63.158 0.00 0.00 0.00 2.87
958 4837 0.179018 GTCCCCATTCCCATTCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
972 4851 5.449314 CCCATTCTCCGTCGATCTATATCAC 60.449 48.000 0.00 0.00 31.93 3.06
991 4870 1.123928 CCTAGGAAGGCTTCGGATGT 58.876 55.000 20.26 5.69 35.64 3.06
995 4874 0.744771 GGAAGGCTTCGGATGTGACC 60.745 60.000 20.26 0.59 0.00 4.02
1004 6617 1.819632 GGATGTGACCGACCATGGC 60.820 63.158 13.04 3.65 0.00 4.40
1011 6624 4.776322 CCGACCATGGCGGCAAGA 62.776 66.667 27.07 0.00 42.55 3.02
1154 6767 3.673484 GGCGCTGGCACAACACAT 61.673 61.111 7.64 0.00 42.47 3.21
1165 6778 2.112928 AACACATGTGCCTGGCGA 59.887 55.556 25.68 3.10 0.00 5.54
1166 6779 2.260869 AACACATGTGCCTGGCGAC 61.261 57.895 25.68 13.48 0.00 5.19
1221 6837 2.413634 CGGCGAACAACAGGTAATTTCC 60.414 50.000 0.00 0.00 0.00 3.13
1233 6849 5.137551 CAGGTAATTTCCGGGGTGAAATAT 58.862 41.667 0.00 0.00 42.58 1.28
1314 6930 1.376037 CGAGAAGCCCTGGACCAAC 60.376 63.158 0.00 0.00 0.00 3.77
1320 6936 3.148084 CCCTGGACCAACACTCGT 58.852 61.111 0.00 0.00 0.00 4.18
1340 6956 4.475135 GCTCACCTCCTTCGGGCC 62.475 72.222 0.00 0.00 34.44 5.80
1361 6977 1.521681 CGGCCTGCACCTAGTTAGC 60.522 63.158 0.00 0.00 0.00 3.09
1363 6979 1.218316 GCCTGCACCTAGTTAGCGT 59.782 57.895 0.00 0.00 0.00 5.07
1369 6985 1.067071 GCACCTAGTTAGCGTCTGGTT 60.067 52.381 0.00 0.00 0.00 3.67
1377 6993 5.148651 AGTTAGCGTCTGGTTAGTTTCAT 57.851 39.130 0.00 0.00 0.00 2.57
1378 6994 5.169295 AGTTAGCGTCTGGTTAGTTTCATC 58.831 41.667 0.00 0.00 0.00 2.92
1381 6997 2.094417 GCGTCTGGTTAGTTTCATCTGC 59.906 50.000 0.00 0.00 0.00 4.26
1384 7000 4.393062 CGTCTGGTTAGTTTCATCTGCATT 59.607 41.667 0.00 0.00 0.00 3.56
1393 7009 5.124645 AGTTTCATCTGCATTCTCATCCTC 58.875 41.667 0.00 0.00 0.00 3.71
1396 7012 5.369409 TCATCTGCATTCTCATCCTCTTT 57.631 39.130 0.00 0.00 0.00 2.52
1401 7017 6.656902 TCTGCATTCTCATCCTCTTTTGTAT 58.343 36.000 0.00 0.00 0.00 2.29
1421 7040 9.851686 TTTGTATGGAGTGCTAATAAATGATCT 57.148 29.630 0.00 0.00 0.00 2.75
1430 7049 9.046296 AGTGCTAATAAATGATCTCTTTTACCG 57.954 33.333 0.00 0.00 31.27 4.02
1432 7051 7.990886 TGCTAATAAATGATCTCTTTTACCGGT 59.009 33.333 13.98 13.98 31.27 5.28
1437 7056 4.884668 TGATCTCTTTTACCGGTCAGTT 57.115 40.909 12.40 0.00 0.00 3.16
1438 7057 5.988310 TGATCTCTTTTACCGGTCAGTTA 57.012 39.130 12.40 0.00 0.00 2.24
1445 7064 4.354893 TTTACCGGTCAGTTATGTGGTT 57.645 40.909 12.40 0.00 32.47 3.67
1449 7068 3.142951 CCGGTCAGTTATGTGGTTTGAA 58.857 45.455 0.00 0.00 0.00 2.69
1450 7069 3.058501 CCGGTCAGTTATGTGGTTTGAAC 60.059 47.826 0.00 0.00 0.00 3.18
1454 7073 3.562141 TCAGTTATGTGGTTTGAACGGTG 59.438 43.478 0.00 0.00 0.00 4.94
1457 7076 2.341846 ATGTGGTTTGAACGGTGACT 57.658 45.000 0.00 0.00 0.00 3.41
1459 7078 1.740585 TGTGGTTTGAACGGTGACTTG 59.259 47.619 0.00 0.00 0.00 3.16
1463 7082 1.400494 GTTTGAACGGTGACTTGTGCT 59.600 47.619 0.00 0.00 0.00 4.40
1464 7083 1.745232 TTGAACGGTGACTTGTGCTT 58.255 45.000 0.00 0.00 0.00 3.91
1467 7086 1.029408 AACGGTGACTTGTGCTTGCA 61.029 50.000 0.00 0.00 0.00 4.08
1480 7099 0.109412 GCTTGCAGTGCAGTTCATCC 60.109 55.000 18.81 0.00 40.61 3.51
1483 7102 0.109153 TGCAGTGCAGTTCATCCTGT 59.891 50.000 15.37 0.00 34.84 4.00
1486 7105 2.074576 CAGTGCAGTTCATCCTGTCTG 58.925 52.381 0.00 0.00 34.84 3.51
1504 7123 6.012658 TGTCTGGCAAGTAAAATTGTGATC 57.987 37.500 0.00 0.00 32.56 2.92
1532 7151 6.923012 TGTTGTAAGATTGATTGTGGAATGG 58.077 36.000 0.00 0.00 0.00 3.16
1539 7158 6.434302 AGATTGATTGTGGAATGGATGGTTA 58.566 36.000 0.00 0.00 0.00 2.85
1546 7165 4.081198 TGTGGAATGGATGGTTAATTTGCC 60.081 41.667 0.00 0.00 0.00 4.52
1615 7234 8.629158 TGCTTATGTGTTAAGTTTCTCATTGTT 58.371 29.630 0.00 0.00 39.67 2.83
1625 7244 9.541143 TTAAGTTTCTCATTGTTCCCAAATTTC 57.459 29.630 0.00 0.00 33.44 2.17
1661 7285 6.041423 TCAGCTCATGTGAAGTCTTTATCA 57.959 37.500 0.00 0.00 0.00 2.15
1673 7297 6.536582 TGAAGTCTTTATCAATGAGCTAGTGC 59.463 38.462 0.00 0.00 40.05 4.40
1684 7308 0.393537 AGCTAGTGCATGGTCCTTGC 60.394 55.000 20.28 20.28 42.74 4.01
1686 7310 1.952367 GCTAGTGCATGGTCCTTGCTT 60.952 52.381 25.44 17.53 40.77 3.91
1787 7411 3.565764 CCTATTGAGAAGGCCATGACA 57.434 47.619 5.01 0.00 0.00 3.58
1800 7424 1.205417 CCATGACAAGGTCAAATGGCC 59.795 52.381 2.87 0.00 45.96 5.36
1848 7472 2.223572 GCTTTGAGGATAAATGGCGTGG 60.224 50.000 0.00 0.00 0.00 4.94
1858 7482 5.065218 GGATAAATGGCGTGGCTAGATAATG 59.935 44.000 0.00 0.00 0.00 1.90
1874 7498 5.341169 AGATAATGTGGATTTTTGTGGGGT 58.659 37.500 0.00 0.00 0.00 4.95
1879 7503 1.062121 TGGATTTTTGTGGGGTTGGGA 60.062 47.619 0.00 0.00 0.00 4.37
1882 7506 2.255770 TTTTTGTGGGGTTGGGAGTT 57.744 45.000 0.00 0.00 0.00 3.01
1883 7507 1.490574 TTTTGTGGGGTTGGGAGTTG 58.509 50.000 0.00 0.00 0.00 3.16
1909 7533 4.009675 GGAGTGTGTTCAATGATTAGGCA 58.990 43.478 0.00 0.00 0.00 4.75
1910 7534 4.095483 GGAGTGTGTTCAATGATTAGGCAG 59.905 45.833 0.00 0.00 0.00 4.85
1919 7543 6.266131 TCAATGATTAGGCAGGTCCTTAAT 57.734 37.500 0.00 0.00 44.75 1.40
1922 7546 5.975988 TGATTAGGCAGGTCCTTAATCTT 57.024 39.130 17.22 0.00 44.75 2.40
1945 7569 3.227614 TCTACTTTCAAAGGGGCCAAAC 58.772 45.455 4.39 0.00 0.00 2.93
1946 7570 1.872773 ACTTTCAAAGGGGCCAAACA 58.127 45.000 4.39 0.00 0.00 2.83
1947 7571 1.762370 ACTTTCAAAGGGGCCAAACAG 59.238 47.619 4.39 0.00 0.00 3.16
1962 7587 3.526019 CCAAACAGGTTAGATAGGGGGAA 59.474 47.826 0.00 0.00 0.00 3.97
1982 7607 1.209019 ACCCATGTCACATCTGCTCTC 59.791 52.381 0.00 0.00 0.00 3.20
1984 7609 1.568606 CATGTCACATCTGCTCTCCG 58.431 55.000 0.00 0.00 0.00 4.63
1985 7610 0.179089 ATGTCACATCTGCTCTCCGC 60.179 55.000 0.00 0.00 39.77 5.54
1987 7612 1.683707 TCACATCTGCTCTCCGCCT 60.684 57.895 0.00 0.00 38.05 5.52
1988 7613 0.395724 TCACATCTGCTCTCCGCCTA 60.396 55.000 0.00 0.00 38.05 3.93
1989 7614 0.249238 CACATCTGCTCTCCGCCTAC 60.249 60.000 0.00 0.00 38.05 3.18
1990 7615 1.365633 CATCTGCTCTCCGCCTACC 59.634 63.158 0.00 0.00 38.05 3.18
1991 7616 1.112315 CATCTGCTCTCCGCCTACCT 61.112 60.000 0.00 0.00 38.05 3.08
1992 7617 1.112315 ATCTGCTCTCCGCCTACCTG 61.112 60.000 0.00 0.00 38.05 4.00
2001 7627 1.367840 CGCCTACCTGTAGATGGGC 59.632 63.158 5.89 1.12 35.21 5.36
2014 7640 3.637821 AGATGGGCTACCTATCCTTGA 57.362 47.619 6.38 0.00 37.76 3.02
2025 7651 3.054802 ACCTATCCTTGACAAAGAGGCTG 60.055 47.826 0.00 0.00 35.19 4.85
2051 7677 2.673775 TGGTTTCATCAAAGGCCTGA 57.326 45.000 5.69 0.00 0.00 3.86
2072 7698 4.726317 TGATCCCTCATTTGGTGGAAGATA 59.274 41.667 0.00 0.00 31.57 1.98
2077 7703 5.126061 CCCTCATTTGGTGGAAGATAGTTTG 59.874 44.000 0.00 0.00 31.57 2.93
2078 7704 5.711976 CCTCATTTGGTGGAAGATAGTTTGT 59.288 40.000 0.00 0.00 31.57 2.83
2151 7777 9.023962 TCCATAGAGTGCTAAAAACATGAAAAT 57.976 29.630 0.00 0.00 0.00 1.82
2152 7778 9.294030 CCATAGAGTGCTAAAAACATGAAAATC 57.706 33.333 0.00 0.00 0.00 2.17
2153 7779 9.844790 CATAGAGTGCTAAAAACATGAAAATCA 57.155 29.630 0.00 0.00 0.00 2.57
2159 7785 9.934190 GTGCTAAAAACATGAAAATCATTTTGT 57.066 25.926 0.00 0.00 34.28 2.83
2160 7786 9.932699 TGCTAAAAACATGAAAATCATTTTGTG 57.067 25.926 0.00 2.00 34.28 3.33
2161 7787 8.894864 GCTAAAAACATGAAAATCATTTTGTGC 58.105 29.630 0.00 0.00 34.28 4.57
2162 7788 9.932699 CTAAAAACATGAAAATCATTTTGTGCA 57.067 25.926 0.00 0.00 34.28 4.57
2176 7803 7.153315 TCATTTTGTGCATCTTTGAGCAAATA 58.847 30.769 0.00 0.00 43.20 1.40
2178 7805 7.966246 TTTTGTGCATCTTTGAGCAAATATT 57.034 28.000 0.00 0.00 43.20 1.28
2180 7807 6.954616 TGTGCATCTTTGAGCAAATATTTG 57.045 33.333 21.54 21.54 43.20 2.32
2181 7808 5.870433 TGTGCATCTTTGAGCAAATATTTGG 59.130 36.000 25.61 10.90 43.20 3.28
2225 7853 3.956199 AGTGAAATCTATTGCATGGGTGG 59.044 43.478 0.00 0.00 0.00 4.61
2234 7862 2.824041 CATGGGTGGTACTGCGCC 60.824 66.667 4.18 0.00 0.00 6.53
2248 7876 0.036388 TGCGCCGAGGAAAGAAGAAT 60.036 50.000 4.18 0.00 0.00 2.40
2252 7880 2.860735 CGCCGAGGAAAGAAGAATACAG 59.139 50.000 0.00 0.00 0.00 2.74
2255 7883 4.620803 GCCGAGGAAAGAAGAATACAGTGA 60.621 45.833 0.00 0.00 0.00 3.41
2267 7895 9.868277 AGAAGAATACAGTGAGATCTTTACTTG 57.132 33.333 10.00 8.81 30.89 3.16
2271 7899 9.593134 GAATACAGTGAGATCTTTACTTGTGAT 57.407 33.333 10.00 6.72 0.00 3.06
2272 7900 9.950496 AATACAGTGAGATCTTTACTTGTGATT 57.050 29.630 10.00 6.06 0.00 2.57
2273 7901 7.664082 ACAGTGAGATCTTTACTTGTGATTG 57.336 36.000 10.00 3.08 0.00 2.67
2274 7902 6.652481 ACAGTGAGATCTTTACTTGTGATTGG 59.348 38.462 10.00 1.82 0.00 3.16
2275 7903 6.875726 CAGTGAGATCTTTACTTGTGATTGGA 59.124 38.462 10.00 0.00 0.00 3.53
2276 7904 7.388776 CAGTGAGATCTTTACTTGTGATTGGAA 59.611 37.037 10.00 0.00 0.00 3.53
2277 7905 7.939039 AGTGAGATCTTTACTTGTGATTGGAAA 59.061 33.333 0.00 0.00 0.00 3.13
2279 7907 9.300681 TGAGATCTTTACTTGTGATTGGAAAAT 57.699 29.630 0.00 0.00 0.00 1.82
2284 7912 9.243637 TCTTTACTTGTGATTGGAAAATTTTCG 57.756 29.630 21.53 9.28 38.06 3.46
2285 7913 8.934507 TTTACTTGTGATTGGAAAATTTTCGT 57.065 26.923 21.53 13.74 38.06 3.85
2286 7914 8.568732 TTACTTGTGATTGGAAAATTTTCGTC 57.431 30.769 21.53 18.61 38.06 4.20
2295 7925 4.216687 TGGAAAATTTTCGTCGCATTACCT 59.783 37.500 21.53 0.00 38.06 3.08
2311 7941 4.487714 TTACCTAGGAATGCCTGTTGAG 57.512 45.455 17.98 0.00 46.45 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.962964 ACTATTTTATGTGCATGCGTAGTAT 57.037 32.000 14.09 5.31 0.00 2.12
4 5 7.962964 ATACTATTTTATGTGCATGCGTAGT 57.037 32.000 14.09 12.04 0.00 2.73
6 7 8.803799 CGATATACTATTTTATGTGCATGCGTA 58.196 33.333 14.09 4.50 0.00 4.42
7 8 7.201522 CCGATATACTATTTTATGTGCATGCGT 60.202 37.037 14.09 4.18 0.00 5.24
8 9 7.010091 TCCGATATACTATTTTATGTGCATGCG 59.990 37.037 14.09 0.00 0.00 4.73
9 10 8.196802 TCCGATATACTATTTTATGTGCATGC 57.803 34.615 11.82 11.82 0.00 4.06
10 11 9.371136 ACTCCGATATACTATTTTATGTGCATG 57.629 33.333 0.00 0.00 0.00 4.06
12 13 9.850628 GTACTCCGATATACTATTTTATGTGCA 57.149 33.333 0.00 0.00 0.00 4.57
29 30 9.790344 TTTCTAGTAGCTAATTAGTACTCCGAT 57.210 33.333 21.10 8.68 0.00 4.18
30 31 9.790344 ATTTCTAGTAGCTAATTAGTACTCCGA 57.210 33.333 21.10 17.46 0.00 4.55
43 44 8.922676 GCGTATTGCATTTATTTCTAGTAGCTA 58.077 33.333 0.00 0.00 45.45 3.32
44 45 7.797819 GCGTATTGCATTTATTTCTAGTAGCT 58.202 34.615 0.00 0.00 45.45 3.32
45 46 7.994851 GCGTATTGCATTTATTTCTAGTAGC 57.005 36.000 0.00 0.00 45.45 3.58
61 62 2.089201 ACAAGGTTTAGGGCGTATTGC 58.911 47.619 0.00 0.00 45.38 3.56
62 63 3.606687 AGACAAGGTTTAGGGCGTATTG 58.393 45.455 0.00 0.00 0.00 1.90
63 64 3.994931 AGACAAGGTTTAGGGCGTATT 57.005 42.857 0.00 0.00 0.00 1.89
64 65 5.104652 ACAATAGACAAGGTTTAGGGCGTAT 60.105 40.000 0.00 0.00 0.00 3.06
65 66 4.223477 ACAATAGACAAGGTTTAGGGCGTA 59.777 41.667 0.00 0.00 0.00 4.42
66 67 3.008704 ACAATAGACAAGGTTTAGGGCGT 59.991 43.478 0.00 0.00 0.00 5.68
67 68 3.374058 CACAATAGACAAGGTTTAGGGCG 59.626 47.826 0.00 0.00 0.00 6.13
68 69 4.585879 TCACAATAGACAAGGTTTAGGGC 58.414 43.478 0.00 0.00 0.00 5.19
69 70 7.013846 TGTTTTCACAATAGACAAGGTTTAGGG 59.986 37.037 0.00 0.00 0.00 3.53
70 71 7.936584 TGTTTTCACAATAGACAAGGTTTAGG 58.063 34.615 0.00 0.00 0.00 2.69
88 89 5.864474 ACAGTTAAATTTGCGTGTGTTTTCA 59.136 32.000 0.00 0.00 0.00 2.69
89 90 6.175087 CACAGTTAAATTTGCGTGTGTTTTC 58.825 36.000 15.33 0.00 32.44 2.29
90 91 5.445275 GCACAGTTAAATTTGCGTGTGTTTT 60.445 36.000 20.59 0.00 38.04 2.43
91 92 4.032331 GCACAGTTAAATTTGCGTGTGTTT 59.968 37.500 20.59 0.00 38.04 2.83
92 93 3.549873 GCACAGTTAAATTTGCGTGTGTT 59.450 39.130 20.59 0.00 38.04 3.32
93 94 3.112580 GCACAGTTAAATTTGCGTGTGT 58.887 40.909 20.59 8.28 38.04 3.72
94 95 2.470999 GGCACAGTTAAATTTGCGTGTG 59.529 45.455 17.66 17.66 38.64 3.82
95 96 2.360801 AGGCACAGTTAAATTTGCGTGT 59.639 40.909 8.27 0.00 35.74 4.49
96 97 3.011949 AGGCACAGTTAAATTTGCGTG 57.988 42.857 8.27 4.14 35.74 5.34
97 98 3.317993 AGAAGGCACAGTTAAATTTGCGT 59.682 39.130 7.84 5.77 35.74 5.24
98 99 3.900941 AGAAGGCACAGTTAAATTTGCG 58.099 40.909 7.84 0.00 35.74 4.85
99 100 6.923508 AGTTTAGAAGGCACAGTTAAATTTGC 59.076 34.615 5.51 5.51 0.00 3.68
100 101 7.920682 ACAGTTTAGAAGGCACAGTTAAATTTG 59.079 33.333 0.00 0.00 0.00 2.32
101 102 7.920682 CACAGTTTAGAAGGCACAGTTAAATTT 59.079 33.333 0.00 0.00 0.00 1.82
102 103 7.284489 TCACAGTTTAGAAGGCACAGTTAAATT 59.716 33.333 0.00 0.00 0.00 1.82
103 104 6.770785 TCACAGTTTAGAAGGCACAGTTAAAT 59.229 34.615 0.00 0.00 0.00 1.40
104 105 6.037830 GTCACAGTTTAGAAGGCACAGTTAAA 59.962 38.462 0.00 0.00 0.00 1.52
105 106 5.526111 GTCACAGTTTAGAAGGCACAGTTAA 59.474 40.000 0.00 0.00 0.00 2.01
106 107 5.054477 GTCACAGTTTAGAAGGCACAGTTA 58.946 41.667 0.00 0.00 0.00 2.24
107 108 3.877508 GTCACAGTTTAGAAGGCACAGTT 59.122 43.478 0.00 0.00 0.00 3.16
108 109 3.467803 GTCACAGTTTAGAAGGCACAGT 58.532 45.455 0.00 0.00 0.00 3.55
109 110 2.476619 CGTCACAGTTTAGAAGGCACAG 59.523 50.000 0.00 0.00 0.00 3.66
110 111 2.479837 CGTCACAGTTTAGAAGGCACA 58.520 47.619 0.00 0.00 0.00 4.57
111 112 1.798813 CCGTCACAGTTTAGAAGGCAC 59.201 52.381 0.00 0.00 0.00 5.01
112 113 1.689813 TCCGTCACAGTTTAGAAGGCA 59.310 47.619 0.00 0.00 34.05 4.75
113 114 2.338500 CTCCGTCACAGTTTAGAAGGC 58.662 52.381 0.00 0.00 34.05 4.35
114 115 2.299297 ACCTCCGTCACAGTTTAGAAGG 59.701 50.000 0.00 0.00 35.14 3.46
115 116 3.662247 ACCTCCGTCACAGTTTAGAAG 57.338 47.619 0.00 0.00 0.00 2.85
116 117 4.147321 ACTACCTCCGTCACAGTTTAGAA 58.853 43.478 0.00 0.00 0.00 2.10
117 118 3.759581 ACTACCTCCGTCACAGTTTAGA 58.240 45.455 0.00 0.00 0.00 2.10
118 119 4.699257 AGTACTACCTCCGTCACAGTTTAG 59.301 45.833 0.00 0.00 0.00 1.85
119 120 4.655963 AGTACTACCTCCGTCACAGTTTA 58.344 43.478 0.00 0.00 0.00 2.01
120 121 3.494332 AGTACTACCTCCGTCACAGTTT 58.506 45.455 0.00 0.00 0.00 2.66
121 122 3.151912 AGTACTACCTCCGTCACAGTT 57.848 47.619 0.00 0.00 0.00 3.16
122 123 2.875094 AGTACTACCTCCGTCACAGT 57.125 50.000 0.00 0.00 0.00 3.55
123 124 3.871485 AGTAGTACTACCTCCGTCACAG 58.129 50.000 25.97 0.00 36.75 3.66
124 125 3.988976 AGTAGTACTACCTCCGTCACA 57.011 47.619 25.97 0.00 36.75 3.58
125 126 4.940654 AGAAAGTAGTACTACCTCCGTCAC 59.059 45.833 25.97 11.26 36.75 3.67
126 127 5.171339 AGAAAGTAGTACTACCTCCGTCA 57.829 43.478 25.97 0.00 36.75 4.35
127 128 7.714813 AGATAAGAAAGTAGTACTACCTCCGTC 59.285 40.741 25.97 18.69 36.75 4.79
128 129 7.498570 CAGATAAGAAAGTAGTACTACCTCCGT 59.501 40.741 25.97 16.07 36.75 4.69
129 130 7.520292 GCAGATAAGAAAGTAGTACTACCTCCG 60.520 44.444 25.97 10.54 36.75 4.63
130 131 7.520292 CGCAGATAAGAAAGTAGTACTACCTCC 60.520 44.444 25.97 15.98 36.75 4.30
131 132 7.226325 TCGCAGATAAGAAAGTAGTACTACCTC 59.774 40.741 25.97 21.88 36.75 3.85
132 133 7.012232 GTCGCAGATAAGAAAGTAGTACTACCT 59.988 40.741 25.97 13.46 40.67 3.08
133 134 7.131565 GTCGCAGATAAGAAAGTAGTACTACC 58.868 42.308 25.97 13.27 40.67 3.18
134 135 7.131565 GGTCGCAGATAAGAAAGTAGTACTAC 58.868 42.308 23.03 23.03 40.67 2.73
135 136 6.261826 GGGTCGCAGATAAGAAAGTAGTACTA 59.738 42.308 2.50 0.00 40.67 1.82
136 137 5.067544 GGGTCGCAGATAAGAAAGTAGTACT 59.932 44.000 0.00 0.00 40.67 2.73
137 138 5.067544 AGGGTCGCAGATAAGAAAGTAGTAC 59.932 44.000 0.00 0.00 40.67 2.73
138 139 5.198965 AGGGTCGCAGATAAGAAAGTAGTA 58.801 41.667 0.00 0.00 40.67 1.82
139 140 4.024670 AGGGTCGCAGATAAGAAAGTAGT 58.975 43.478 0.00 0.00 40.67 2.73
140 141 4.657436 AGGGTCGCAGATAAGAAAGTAG 57.343 45.455 0.00 0.00 40.67 2.57
141 142 5.067413 CAGTAGGGTCGCAGATAAGAAAGTA 59.933 44.000 0.00 0.00 40.67 2.24
142 143 4.024670 AGTAGGGTCGCAGATAAGAAAGT 58.975 43.478 0.00 0.00 40.67 2.66
143 144 4.098044 TCAGTAGGGTCGCAGATAAGAAAG 59.902 45.833 0.00 0.00 40.67 2.62
144 145 4.021229 TCAGTAGGGTCGCAGATAAGAAA 58.979 43.478 0.00 0.00 40.67 2.52
145 146 3.628008 TCAGTAGGGTCGCAGATAAGAA 58.372 45.455 0.00 0.00 40.67 2.52
146 147 3.215151 CTCAGTAGGGTCGCAGATAAGA 58.785 50.000 0.00 0.00 40.67 2.10
147 148 2.287909 GCTCAGTAGGGTCGCAGATAAG 60.288 54.545 0.00 0.00 40.67 1.73
148 149 1.681793 GCTCAGTAGGGTCGCAGATAA 59.318 52.381 0.00 0.00 40.67 1.75
179 180 9.926158 AAGTGATATTGTTCAATGCAAATGTTA 57.074 25.926 8.11 0.00 0.00 2.41
180 181 8.714179 CAAGTGATATTGTTCAATGCAAATGTT 58.286 29.630 8.11 0.00 0.00 2.71
182 183 8.377681 GTCAAGTGATATTGTTCAATGCAAATG 58.622 33.333 8.11 0.00 0.00 2.32
183 184 7.546667 GGTCAAGTGATATTGTTCAATGCAAAT 59.453 33.333 8.11 0.00 0.00 2.32
184 185 6.867816 GGTCAAGTGATATTGTTCAATGCAAA 59.132 34.615 8.11 0.00 0.00 3.68
185 186 6.389091 GGTCAAGTGATATTGTTCAATGCAA 58.611 36.000 8.11 0.00 0.00 4.08
186 187 5.105797 GGGTCAAGTGATATTGTTCAATGCA 60.106 40.000 8.11 0.00 0.00 3.96
187 188 5.105797 TGGGTCAAGTGATATTGTTCAATGC 60.106 40.000 8.11 1.95 0.00 3.56
188 189 6.513806 TGGGTCAAGTGATATTGTTCAATG 57.486 37.500 8.11 0.00 0.00 2.82
189 190 6.664816 ACATGGGTCAAGTGATATTGTTCAAT 59.335 34.615 0.00 3.55 0.00 2.57
190 191 6.009589 ACATGGGTCAAGTGATATTGTTCAA 58.990 36.000 0.00 0.00 0.00 2.69
191 192 5.415389 CACATGGGTCAAGTGATATTGTTCA 59.585 40.000 0.00 0.00 35.44 3.18
192 193 5.647658 TCACATGGGTCAAGTGATATTGTTC 59.352 40.000 0.00 0.00 37.20 3.18
193 194 5.569355 TCACATGGGTCAAGTGATATTGTT 58.431 37.500 0.00 0.00 37.20 2.83
194 195 5.178096 TCACATGGGTCAAGTGATATTGT 57.822 39.130 0.00 0.00 37.20 2.71
195 196 6.072008 TGTTTCACATGGGTCAAGTGATATTG 60.072 38.462 6.77 0.00 40.79 1.90
196 197 6.009589 TGTTTCACATGGGTCAAGTGATATT 58.990 36.000 6.77 0.00 40.79 1.28
197 198 5.569355 TGTTTCACATGGGTCAAGTGATAT 58.431 37.500 6.77 0.00 40.79 1.63
198 199 4.979335 TGTTTCACATGGGTCAAGTGATA 58.021 39.130 6.77 0.79 40.79 2.15
199 200 3.831323 TGTTTCACATGGGTCAAGTGAT 58.169 40.909 6.77 0.00 40.79 3.06
200 201 3.289407 TGTTTCACATGGGTCAAGTGA 57.711 42.857 0.00 2.41 39.72 3.41
201 202 4.761739 ACTATGTTTCACATGGGTCAAGTG 59.238 41.667 0.00 0.00 40.81 3.16
202 203 4.985538 ACTATGTTTCACATGGGTCAAGT 58.014 39.130 0.00 0.00 40.81 3.16
203 204 5.964958 AACTATGTTTCACATGGGTCAAG 57.035 39.130 0.00 0.00 40.81 3.02
206 207 4.000988 ACGAACTATGTTTCACATGGGTC 58.999 43.478 7.94 7.94 46.38 4.46
207 208 4.015872 ACGAACTATGTTTCACATGGGT 57.984 40.909 0.00 0.00 39.83 4.51
208 209 6.489127 TTTACGAACTATGTTTCACATGGG 57.511 37.500 0.00 0.00 40.81 4.00
209 210 9.650371 CATATTTACGAACTATGTTTCACATGG 57.350 33.333 0.00 0.00 42.02 3.66
212 213 9.647797 AGTCATATTTACGAACTATGTTTCACA 57.352 29.630 0.00 0.00 0.00 3.58
244 245 9.354673 CACCACTCCTGTTTTGGAATATATAAT 57.645 33.333 0.00 0.00 35.43 1.28
245 246 8.333235 ACACCACTCCTGTTTTGGAATATATAA 58.667 33.333 0.00 0.00 35.43 0.98
246 247 7.867921 ACACCACTCCTGTTTTGGAATATATA 58.132 34.615 0.00 0.00 35.43 0.86
247 248 6.731467 ACACCACTCCTGTTTTGGAATATAT 58.269 36.000 0.00 0.00 35.43 0.86
248 249 6.134535 ACACCACTCCTGTTTTGGAATATA 57.865 37.500 0.00 0.00 35.43 0.86
249 250 4.998051 ACACCACTCCTGTTTTGGAATAT 58.002 39.130 0.00 0.00 35.43 1.28
250 251 4.447138 ACACCACTCCTGTTTTGGAATA 57.553 40.909 0.00 0.00 35.43 1.75
251 252 3.312736 ACACCACTCCTGTTTTGGAAT 57.687 42.857 0.00 0.00 35.43 3.01
252 253 2.818751 ACACCACTCCTGTTTTGGAA 57.181 45.000 0.00 0.00 35.43 3.53
253 254 2.818751 AACACCACTCCTGTTTTGGA 57.181 45.000 0.00 0.00 34.24 3.53
254 255 6.642707 TTAATAACACCACTCCTGTTTTGG 57.357 37.500 0.00 0.00 33.79 3.28
255 256 7.812669 GGAATTAATAACACCACTCCTGTTTTG 59.187 37.037 0.00 0.00 33.79 2.44
256 257 7.507616 TGGAATTAATAACACCACTCCTGTTTT 59.492 33.333 0.00 0.00 33.79 2.43
257 258 7.007723 TGGAATTAATAACACCACTCCTGTTT 58.992 34.615 0.00 0.00 33.79 2.83
258 259 6.548321 TGGAATTAATAACACCACTCCTGTT 58.452 36.000 0.00 0.00 35.92 3.16
259 260 6.134535 TGGAATTAATAACACCACTCCTGT 57.865 37.500 0.00 0.00 0.00 4.00
260 261 7.461182 TTTGGAATTAATAACACCACTCCTG 57.539 36.000 0.00 0.00 0.00 3.86
261 262 8.485578 TTTTTGGAATTAATAACACCACTCCT 57.514 30.769 0.00 0.00 0.00 3.69
267 268 9.051679 GCCCATATTTTTGGAATTAATAACACC 57.948 33.333 0.00 0.00 39.25 4.16
268 269 8.760569 CGCCCATATTTTTGGAATTAATAACAC 58.239 33.333 0.00 0.00 39.25 3.32
269 270 8.478877 ACGCCCATATTTTTGGAATTAATAACA 58.521 29.630 0.00 0.00 39.25 2.41
270 271 8.760569 CACGCCCATATTTTTGGAATTAATAAC 58.239 33.333 0.00 0.00 39.25 1.89
271 272 8.478877 ACACGCCCATATTTTTGGAATTAATAA 58.521 29.630 0.00 0.00 39.25 1.40
272 273 8.012957 ACACGCCCATATTTTTGGAATTAATA 57.987 30.769 0.00 0.00 39.25 0.98
273 274 6.883744 ACACGCCCATATTTTTGGAATTAAT 58.116 32.000 0.00 0.00 39.25 1.40
274 275 6.287589 ACACGCCCATATTTTTGGAATTAA 57.712 33.333 0.00 0.00 39.25 1.40
275 276 5.923733 ACACGCCCATATTTTTGGAATTA 57.076 34.783 0.00 0.00 39.25 1.40
276 277 4.817318 ACACGCCCATATTTTTGGAATT 57.183 36.364 0.00 0.00 39.25 2.17
277 278 5.923733 TTACACGCCCATATTTTTGGAAT 57.076 34.783 0.00 0.00 39.25 3.01
278 279 5.923733 ATTACACGCCCATATTTTTGGAA 57.076 34.783 0.00 0.00 39.25 3.53
279 280 5.655488 CAATTACACGCCCATATTTTTGGA 58.345 37.500 0.00 0.00 39.25 3.53
280 281 4.269844 GCAATTACACGCCCATATTTTTGG 59.730 41.667 0.00 0.00 36.46 3.28
281 282 4.269844 GGCAATTACACGCCCATATTTTTG 59.730 41.667 0.00 0.00 42.82 2.44
282 283 4.438148 GGCAATTACACGCCCATATTTTT 58.562 39.130 0.00 0.00 42.82 1.94
283 284 3.490078 CGGCAATTACACGCCCATATTTT 60.490 43.478 0.00 0.00 46.04 1.82
284 285 2.034053 CGGCAATTACACGCCCATATTT 59.966 45.455 0.00 0.00 46.04 1.40
285 286 1.606668 CGGCAATTACACGCCCATATT 59.393 47.619 0.00 0.00 46.04 1.28
286 287 1.202710 TCGGCAATTACACGCCCATAT 60.203 47.619 0.00 0.00 46.04 1.78
287 288 0.178301 TCGGCAATTACACGCCCATA 59.822 50.000 0.00 0.00 46.04 2.74
288 289 1.078072 TCGGCAATTACACGCCCAT 60.078 52.632 0.00 0.00 46.04 4.00
289 290 1.743623 CTCGGCAATTACACGCCCA 60.744 57.895 0.00 0.00 46.04 5.36
290 291 2.469516 CCTCGGCAATTACACGCCC 61.470 63.158 0.00 0.00 46.04 6.13
291 292 1.022451 TTCCTCGGCAATTACACGCC 61.022 55.000 0.00 0.00 45.28 5.68
292 293 0.800012 TTTCCTCGGCAATTACACGC 59.200 50.000 0.00 0.00 0.00 5.34
293 294 2.675844 TGATTTCCTCGGCAATTACACG 59.324 45.455 0.00 0.00 0.00 4.49
294 295 3.181500 GGTGATTTCCTCGGCAATTACAC 60.181 47.826 5.82 0.00 0.00 2.90
295 296 3.013921 GGTGATTTCCTCGGCAATTACA 58.986 45.455 5.82 0.00 0.00 2.41
296 297 3.279434 AGGTGATTTCCTCGGCAATTAC 58.721 45.455 0.00 0.00 31.32 1.89
297 298 3.644966 AGGTGATTTCCTCGGCAATTA 57.355 42.857 0.00 0.00 31.32 1.40
298 299 2.514458 AGGTGATTTCCTCGGCAATT 57.486 45.000 0.00 0.00 31.32 2.32
299 300 3.199946 TCTTAGGTGATTTCCTCGGCAAT 59.800 43.478 0.00 0.00 38.86 3.56
300 301 2.569853 TCTTAGGTGATTTCCTCGGCAA 59.430 45.455 0.00 0.00 38.86 4.52
301 302 2.184533 TCTTAGGTGATTTCCTCGGCA 58.815 47.619 0.00 0.00 38.86 5.69
302 303 2.981859 TCTTAGGTGATTTCCTCGGC 57.018 50.000 0.00 0.00 38.86 5.54
303 304 8.451908 AATAATTTCTTAGGTGATTTCCTCGG 57.548 34.615 0.00 0.00 38.86 4.63
311 312 8.903820 GCCACTTGTAATAATTTCTTAGGTGAT 58.096 33.333 0.00 0.00 0.00 3.06
312 313 7.885922 TGCCACTTGTAATAATTTCTTAGGTGA 59.114 33.333 0.00 0.00 0.00 4.02
313 314 7.968405 GTGCCACTTGTAATAATTTCTTAGGTG 59.032 37.037 0.00 0.00 0.00 4.00
314 315 7.888546 AGTGCCACTTGTAATAATTTCTTAGGT 59.111 33.333 0.00 0.00 0.00 3.08
315 316 8.184192 CAGTGCCACTTGTAATAATTTCTTAGG 58.816 37.037 0.00 0.00 0.00 2.69
316 317 8.946085 TCAGTGCCACTTGTAATAATTTCTTAG 58.054 33.333 0.00 0.00 0.00 2.18
317 318 8.856153 TCAGTGCCACTTGTAATAATTTCTTA 57.144 30.769 0.00 0.00 0.00 2.10
318 319 7.665559 TCTCAGTGCCACTTGTAATAATTTCTT 59.334 33.333 0.00 0.00 0.00 2.52
319 320 7.168219 TCTCAGTGCCACTTGTAATAATTTCT 58.832 34.615 0.00 0.00 0.00 2.52
320 321 7.377766 TCTCAGTGCCACTTGTAATAATTTC 57.622 36.000 0.00 0.00 0.00 2.17
321 322 7.831193 AGATCTCAGTGCCACTTGTAATAATTT 59.169 33.333 0.00 0.00 0.00 1.82
322 323 7.281774 CAGATCTCAGTGCCACTTGTAATAATT 59.718 37.037 0.00 0.00 0.00 1.40
323 324 6.765036 CAGATCTCAGTGCCACTTGTAATAAT 59.235 38.462 0.00 0.00 0.00 1.28
324 325 6.108687 CAGATCTCAGTGCCACTTGTAATAA 58.891 40.000 0.00 0.00 0.00 1.40
325 326 5.187772 ACAGATCTCAGTGCCACTTGTAATA 59.812 40.000 0.00 0.00 0.00 0.98
326 327 4.019860 ACAGATCTCAGTGCCACTTGTAAT 60.020 41.667 0.00 0.00 0.00 1.89
327 328 3.324846 ACAGATCTCAGTGCCACTTGTAA 59.675 43.478 0.00 0.00 0.00 2.41
328 329 2.899900 ACAGATCTCAGTGCCACTTGTA 59.100 45.455 0.00 0.00 0.00 2.41
329 330 1.696336 ACAGATCTCAGTGCCACTTGT 59.304 47.619 0.00 0.00 0.00 3.16
330 331 2.469274 ACAGATCTCAGTGCCACTTG 57.531 50.000 0.00 0.00 0.00 3.16
331 332 2.105477 ACAACAGATCTCAGTGCCACTT 59.895 45.455 0.00 0.00 0.00 3.16
332 333 1.696336 ACAACAGATCTCAGTGCCACT 59.304 47.619 0.00 0.00 0.00 4.00
333 334 2.072298 GACAACAGATCTCAGTGCCAC 58.928 52.381 0.00 0.00 0.00 5.01
334 335 1.693606 TGACAACAGATCTCAGTGCCA 59.306 47.619 0.00 0.00 0.00 4.92
335 336 2.072298 GTGACAACAGATCTCAGTGCC 58.928 52.381 0.00 0.00 0.00 5.01
336 337 2.759191 TGTGACAACAGATCTCAGTGC 58.241 47.619 0.00 0.00 0.00 4.40
337 338 5.739752 TTTTGTGACAACAGATCTCAGTG 57.260 39.130 0.00 0.00 37.67 3.66
338 339 6.238842 CCATTTTTGTGACAACAGATCTCAGT 60.239 38.462 0.00 0.00 37.67 3.41
339 340 6.147581 CCATTTTTGTGACAACAGATCTCAG 58.852 40.000 0.00 0.00 37.67 3.35
340 341 5.593909 ACCATTTTTGTGACAACAGATCTCA 59.406 36.000 0.00 0.00 37.67 3.27
341 342 6.076981 ACCATTTTTGTGACAACAGATCTC 57.923 37.500 0.00 0.00 37.67 2.75
342 343 7.581213 TTACCATTTTTGTGACAACAGATCT 57.419 32.000 0.00 0.00 37.67 2.75
343 344 7.704472 TGTTTACCATTTTTGTGACAACAGATC 59.296 33.333 0.00 0.00 37.67 2.75
344 345 7.551585 TGTTTACCATTTTTGTGACAACAGAT 58.448 30.769 0.00 0.00 37.67 2.90
345 346 6.925211 TGTTTACCATTTTTGTGACAACAGA 58.075 32.000 0.00 0.00 37.67 3.41
346 347 7.588143 TTGTTTACCATTTTTGTGACAACAG 57.412 32.000 0.00 0.00 37.67 3.16
347 348 7.441157 TGTTTGTTTACCATTTTTGTGACAACA 59.559 29.630 0.00 0.00 0.00 3.33
348 349 7.797819 TGTTTGTTTACCATTTTTGTGACAAC 58.202 30.769 0.00 0.00 0.00 3.32
349 350 7.962964 TGTTTGTTTACCATTTTTGTGACAA 57.037 28.000 0.00 0.00 0.00 3.18
350 351 8.553459 AATGTTTGTTTACCATTTTTGTGACA 57.447 26.923 0.00 0.00 0.00 3.58
358 359 9.981114 CCTCTTTCTAATGTTTGTTTACCATTT 57.019 29.630 0.00 0.00 31.63 2.32
359 360 9.143155 ACCTCTTTCTAATGTTTGTTTACCATT 57.857 29.630 0.00 0.00 33.62 3.16
360 361 8.706322 ACCTCTTTCTAATGTTTGTTTACCAT 57.294 30.769 0.00 0.00 0.00 3.55
361 362 7.776030 TGACCTCTTTCTAATGTTTGTTTACCA 59.224 33.333 0.00 0.00 0.00 3.25
362 363 8.161699 TGACCTCTTTCTAATGTTTGTTTACC 57.838 34.615 0.00 0.00 0.00 2.85
363 364 9.827411 GATGACCTCTTTCTAATGTTTGTTTAC 57.173 33.333 0.00 0.00 0.00 2.01
364 365 9.567776 TGATGACCTCTTTCTAATGTTTGTTTA 57.432 29.630 0.00 0.00 0.00 2.01
365 366 8.463930 TGATGACCTCTTTCTAATGTTTGTTT 57.536 30.769 0.00 0.00 0.00 2.83
366 367 8.641498 ATGATGACCTCTTTCTAATGTTTGTT 57.359 30.769 0.00 0.00 0.00 2.83
367 368 9.911788 ATATGATGACCTCTTTCTAATGTTTGT 57.088 29.630 0.00 0.00 0.00 2.83
395 396 9.979270 GTCATGAACAGAACACTTTTCATATAG 57.021 33.333 0.00 1.98 38.30 1.31
452 453 8.849168 TCATAATATCATGCCCAGTTACTTTTG 58.151 33.333 0.00 0.00 0.00 2.44
541 550 4.686091 TGAAGTTCAAGCAATCAGACTACG 59.314 41.667 2.20 0.00 0.00 3.51
550 559 6.703165 GGATGTTCTTTTGAAGTTCAAGCAAT 59.297 34.615 17.36 7.85 37.70 3.56
582 591 1.338020 GGGTGTGCTTCTTTCAACTGG 59.662 52.381 0.00 0.00 0.00 4.00
583 592 1.338020 GGGGTGTGCTTCTTTCAACTG 59.662 52.381 0.00 0.00 0.00 3.16
633 642 3.256704 AGGGAGTATGTTCTTCCAACCA 58.743 45.455 0.00 0.00 35.62 3.67
668 677 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
693 702 9.819267 GTCTCAGCCTTAATACAACTTTATACT 57.181 33.333 0.00 0.00 0.00 2.12
694 703 9.595823 TGTCTCAGCCTTAATACAACTTTATAC 57.404 33.333 0.00 0.00 0.00 1.47
695 704 9.595823 GTGTCTCAGCCTTAATACAACTTTATA 57.404 33.333 0.00 0.00 0.00 0.98
696 705 8.322091 AGTGTCTCAGCCTTAATACAACTTTAT 58.678 33.333 0.00 0.00 0.00 1.40
697 706 7.676947 AGTGTCTCAGCCTTAATACAACTTTA 58.323 34.615 0.00 0.00 0.00 1.85
698 707 6.534634 AGTGTCTCAGCCTTAATACAACTTT 58.465 36.000 0.00 0.00 0.00 2.66
699 708 6.115448 AGTGTCTCAGCCTTAATACAACTT 57.885 37.500 0.00 0.00 0.00 2.66
700 709 5.746990 AGTGTCTCAGCCTTAATACAACT 57.253 39.130 0.00 0.00 0.00 3.16
701 710 8.494016 AATAAGTGTCTCAGCCTTAATACAAC 57.506 34.615 0.00 0.00 0.00 3.32
702 711 9.515226 AAAATAAGTGTCTCAGCCTTAATACAA 57.485 29.630 0.00 0.00 0.00 2.41
703 712 8.946085 CAAAATAAGTGTCTCAGCCTTAATACA 58.054 33.333 0.00 0.00 0.00 2.29
704 713 9.162764 TCAAAATAAGTGTCTCAGCCTTAATAC 57.837 33.333 0.00 0.00 0.00 1.89
707 716 8.349983 GTTTCAAAATAAGTGTCTCAGCCTTAA 58.650 33.333 0.00 0.00 0.00 1.85
713 722 6.347725 CCTCCGTTTCAAAATAAGTGTCTCAG 60.348 42.308 0.00 0.00 0.00 3.35
726 735 3.056322 GCTAGTAGTCCCTCCGTTTCAAA 60.056 47.826 0.00 0.00 0.00 2.69
730 739 2.528673 AGCTAGTAGTCCCTCCGTTT 57.471 50.000 0.00 0.00 0.00 3.60
731 740 2.528673 AAGCTAGTAGTCCCTCCGTT 57.471 50.000 0.00 0.00 0.00 4.44
741 750 8.001881 TGAAAGGAGATCTTGTAAGCTAGTAG 57.998 38.462 0.00 0.00 35.55 2.57
744 753 7.106439 TCTGAAAGGAGATCTTGTAAGCTAG 57.894 40.000 0.00 0.00 35.55 3.42
822 4672 0.918983 TTGGGCTATCTCCAGGTTGG 59.081 55.000 0.00 0.00 39.43 3.77
826 4676 2.379005 GGTTTTTGGGCTATCTCCAGG 58.621 52.381 0.00 0.00 35.48 4.45
870 4720 1.949525 GTGAACATGAAGGTGTGTGCT 59.050 47.619 0.00 0.00 31.49 4.40
914 4764 3.966543 GTGTGTGTGGGGAGGGGG 61.967 72.222 0.00 0.00 0.00 5.40
916 4766 4.329545 CGGTGTGTGTGGGGAGGG 62.330 72.222 0.00 0.00 0.00 4.30
917 4767 3.114825 AACGGTGTGTGTGGGGAGG 62.115 63.158 0.00 0.00 0.00 4.30
918 4768 1.597027 GAACGGTGTGTGTGGGGAG 60.597 63.158 0.00 0.00 0.00 4.30
921 4771 1.954146 CGAGAACGGTGTGTGTGGG 60.954 63.158 0.00 0.00 35.72 4.61
922 4772 1.213094 GACGAGAACGGTGTGTGTGG 61.213 60.000 0.00 0.00 44.46 4.17
923 4773 1.213094 GGACGAGAACGGTGTGTGTG 61.213 60.000 0.00 0.00 44.46 3.82
938 4817 0.179018 GGAGAATGGGAATGGGGACG 60.179 60.000 0.00 0.00 0.00 4.79
958 4837 5.066764 GCCTTCCTAGGTGATATAGATCGAC 59.933 48.000 9.08 0.00 44.00 4.20
972 4851 1.123928 ACATCCGAAGCCTTCCTAGG 58.876 55.000 0.82 0.82 45.02 3.02
987 4866 2.173669 CGCCATGGTCGGTCACATC 61.174 63.158 14.67 0.00 0.00 3.06
995 4874 3.197790 CTCTTGCCGCCATGGTCG 61.198 66.667 14.67 16.73 41.21 4.79
1004 6617 0.318275 GAGGTATCTCGCTCTTGCCG 60.318 60.000 0.00 0.00 35.36 5.69
1008 6621 2.312390 GGAAGGAGGTATCTCGCTCTT 58.688 52.381 0.00 0.00 40.85 2.85
1011 6624 1.457009 GCGGAAGGAGGTATCTCGCT 61.457 60.000 0.00 0.00 40.85 4.93
1169 6782 0.099436 GCGAAATTGCAGCCCACTAG 59.901 55.000 0.00 0.00 34.15 2.57
1202 6818 2.413634 CCGGAAATTACCTGTTGTTCGC 60.414 50.000 0.00 0.00 0.00 4.70
1203 6819 2.160813 CCCGGAAATTACCTGTTGTTCG 59.839 50.000 0.73 0.00 0.00 3.95
1204 6820 2.490509 CCCCGGAAATTACCTGTTGTTC 59.509 50.000 0.73 0.00 0.00 3.18
1212 6828 4.214758 CGATATTTCACCCCGGAAATTACC 59.785 45.833 0.73 0.00 43.13 2.85
1221 6837 0.944311 CGAGGCGATATTTCACCCCG 60.944 60.000 0.00 0.00 0.00 5.73
1314 6930 2.179517 GAGGTGAGCCGACGAGTG 59.820 66.667 0.00 0.00 40.50 3.51
1357 6973 5.168569 CAGATGAAACTAACCAGACGCTAA 58.831 41.667 0.00 0.00 0.00 3.09
1361 6977 3.325870 TGCAGATGAAACTAACCAGACG 58.674 45.455 0.00 0.00 0.00 4.18
1363 6979 5.809001 AGAATGCAGATGAAACTAACCAGA 58.191 37.500 0.00 0.00 0.00 3.86
1369 6985 6.099413 AGAGGATGAGAATGCAGATGAAACTA 59.901 38.462 0.00 0.00 0.00 2.24
1377 6993 4.914983 ACAAAAGAGGATGAGAATGCAGA 58.085 39.130 0.00 0.00 0.00 4.26
1378 6994 6.238676 CCATACAAAAGAGGATGAGAATGCAG 60.239 42.308 0.00 0.00 0.00 4.41
1381 6997 7.012138 CACTCCATACAAAAGAGGATGAGAATG 59.988 40.741 0.00 0.00 31.70 2.67
1384 7000 5.627735 GCACTCCATACAAAAGAGGATGAGA 60.628 44.000 0.00 0.00 31.70 3.27
1396 7012 9.494271 GAGATCATTTATTAGCACTCCATACAA 57.506 33.333 0.00 0.00 0.00 2.41
1419 7038 5.475719 CACATAACTGACCGGTAAAAGAGA 58.524 41.667 7.34 0.00 0.00 3.10
1420 7039 4.630069 CCACATAACTGACCGGTAAAAGAG 59.370 45.833 7.34 0.90 0.00 2.85
1421 7040 4.040706 ACCACATAACTGACCGGTAAAAGA 59.959 41.667 7.34 0.00 0.00 2.52
1429 7048 3.363575 CGTTCAAACCACATAACTGACCG 60.364 47.826 0.00 0.00 0.00 4.79
1430 7049 3.058501 CCGTTCAAACCACATAACTGACC 60.059 47.826 0.00 0.00 0.00 4.02
1432 7051 3.562141 CACCGTTCAAACCACATAACTGA 59.438 43.478 0.00 0.00 0.00 3.41
1437 7056 3.478857 AGTCACCGTTCAAACCACATA 57.521 42.857 0.00 0.00 0.00 2.29
1438 7057 2.341846 AGTCACCGTTCAAACCACAT 57.658 45.000 0.00 0.00 0.00 3.21
1445 7064 1.400142 CAAGCACAAGTCACCGTTCAA 59.600 47.619 0.00 0.00 0.00 2.69
1449 7068 1.439353 CTGCAAGCACAAGTCACCGT 61.439 55.000 0.00 0.00 0.00 4.83
1450 7069 1.280746 CTGCAAGCACAAGTCACCG 59.719 57.895 0.00 0.00 0.00 4.94
1454 7073 0.317603 CTGCACTGCAAGCACAAGTC 60.318 55.000 9.24 0.00 38.41 3.01
1457 7076 0.101040 GAACTGCACTGCAAGCACAA 59.899 50.000 9.24 0.00 38.41 3.33
1459 7078 0.313043 ATGAACTGCACTGCAAGCAC 59.687 50.000 9.24 1.93 38.41 4.40
1463 7082 1.241165 CAGGATGAACTGCACTGCAA 58.759 50.000 4.99 0.00 39.69 4.08
1464 7083 0.109153 ACAGGATGAACTGCACTGCA 59.891 50.000 3.11 3.11 42.21 4.41
1467 7086 1.002888 CCAGACAGGATGAACTGCACT 59.997 52.381 0.00 0.00 42.21 4.40
1480 7099 5.437289 TCACAATTTTACTTGCCAGACAG 57.563 39.130 0.00 0.00 0.00 3.51
1483 7102 6.647334 TTGATCACAATTTTACTTGCCAGA 57.353 33.333 0.00 0.00 0.00 3.86
1504 7123 8.815141 TTCCACAATCAATCTTACAACAATTG 57.185 30.769 3.24 3.24 0.00 2.32
1532 7151 5.585844 CCCTCAAAATGGCAAATTAACCATC 59.414 40.000 11.50 0.00 46.04 3.51
1539 7158 3.261643 GTCTCCCCTCAAAATGGCAAATT 59.738 43.478 0.00 0.00 0.00 1.82
1546 7165 5.395768 CCACTACTAGTCTCCCCTCAAAATG 60.396 48.000 0.00 0.00 0.00 2.32
1625 7244 8.877808 TCACATGAGCTGATAAATAGTAACTG 57.122 34.615 0.00 0.00 0.00 3.16
1641 7260 7.312657 TCATTGATAAAGACTTCACATGAGC 57.687 36.000 0.00 0.00 0.00 4.26
1646 7265 7.547019 CACTAGCTCATTGATAAAGACTTCACA 59.453 37.037 0.00 0.00 0.00 3.58
1661 7285 1.842562 AGGACCATGCACTAGCTCATT 59.157 47.619 0.00 0.00 42.74 2.57
1694 7318 5.475564 ACCACGCCTTGTACAATAAATCTTT 59.524 36.000 9.13 0.00 0.00 2.52
1767 7391 3.565764 TGTCATGGCCTTCTCAATAGG 57.434 47.619 3.32 0.00 35.80 2.57
1787 7411 7.357471 AGATAAAGAATAGGCCATTTGACCTT 58.643 34.615 5.01 0.19 37.50 3.50
1820 7444 6.627065 CGCCATTTATCCTCAAAGCCTTTTTA 60.627 38.462 0.00 0.00 0.00 1.52
1848 7472 6.461509 CCCCACAAAAATCCACATTATCTAGC 60.462 42.308 0.00 0.00 0.00 3.42
1858 7482 1.071542 CCCAACCCCACAAAAATCCAC 59.928 52.381 0.00 0.00 0.00 4.02
1909 7533 8.437274 TTGAAAGTAGAGAAGATTAAGGACCT 57.563 34.615 0.00 0.00 0.00 3.85
1910 7534 9.157104 CTTTGAAAGTAGAGAAGATTAAGGACC 57.843 37.037 0.00 0.00 0.00 4.46
1919 7543 3.009143 GGCCCCTTTGAAAGTAGAGAAGA 59.991 47.826 4.02 0.00 0.00 2.87
1922 7546 2.344592 TGGCCCCTTTGAAAGTAGAGA 58.655 47.619 0.00 0.00 0.00 3.10
1962 7587 1.209019 GAGAGCAGATGTGACATGGGT 59.791 52.381 1.23 0.00 0.00 4.51
1982 7607 2.050269 CCCATCTACAGGTAGGCGG 58.950 63.158 6.62 7.21 34.06 6.13
1984 7609 1.619332 GTAGCCCATCTACAGGTAGGC 59.381 57.143 6.62 3.40 45.47 3.93
1992 7617 4.221041 GTCAAGGATAGGTAGCCCATCTAC 59.779 50.000 4.64 0.00 45.44 2.59
2001 7627 4.407296 AGCCTCTTTGTCAAGGATAGGTAG 59.593 45.833 0.00 0.00 34.35 3.18
2006 7632 4.908601 TTCAGCCTCTTTGTCAAGGATA 57.091 40.909 0.00 0.00 34.35 2.59
2009 7635 4.654091 TTTTTCAGCCTCTTTGTCAAGG 57.346 40.909 0.00 0.00 35.65 3.61
2044 7670 0.554792 CCAAATGAGGGATCAGGCCT 59.445 55.000 0.00 0.00 0.00 5.19
2045 7671 0.259938 ACCAAATGAGGGATCAGGCC 59.740 55.000 0.00 0.00 0.00 5.19
2047 7673 1.565759 TCCACCAAATGAGGGATCAGG 59.434 52.381 0.00 0.00 0.00 3.86
2051 7677 4.728860 ACTATCTTCCACCAAATGAGGGAT 59.271 41.667 0.00 0.00 0.00 3.85
2100 7726 7.707624 TCATCCACTAGCAGAAAAATTGATT 57.292 32.000 0.00 0.00 0.00 2.57
2105 7731 5.759059 TGGATCATCCACTAGCAGAAAAAT 58.241 37.500 0.66 0.00 42.67 1.82
2151 7777 4.587584 TGCTCAAAGATGCACAAAATGA 57.412 36.364 0.00 0.00 33.94 2.57
2152 7778 5.660629 TTTGCTCAAAGATGCACAAAATG 57.339 34.783 0.00 0.00 39.05 2.32
2153 7779 8.556213 AATATTTGCTCAAAGATGCACAAAAT 57.444 26.923 3.59 0.00 39.05 1.82
2154 7780 7.966246 AATATTTGCTCAAAGATGCACAAAA 57.034 28.000 3.59 0.00 39.05 2.44
2157 7783 5.870433 CCAAATATTTGCTCAAAGATGCACA 59.130 36.000 20.67 0.00 39.05 4.57
2158 7784 5.870978 ACCAAATATTTGCTCAAAGATGCAC 59.129 36.000 20.67 0.00 39.05 4.57
2159 7785 6.040209 ACCAAATATTTGCTCAAAGATGCA 57.960 33.333 20.67 0.00 36.86 3.96
2160 7786 6.973229 AACCAAATATTTGCTCAAAGATGC 57.027 33.333 20.67 0.00 36.86 3.91
2161 7787 8.437742 GTCAAACCAAATATTTGCTCAAAGATG 58.562 33.333 20.67 7.92 37.05 2.90
2162 7788 7.329226 CGTCAAACCAAATATTTGCTCAAAGAT 59.671 33.333 20.67 0.00 37.05 2.40
2176 7803 6.627395 TGAAAGTGTATCGTCAAACCAAAT 57.373 33.333 0.00 0.00 0.00 2.32
2178 7805 6.438259 TTTGAAAGTGTATCGTCAAACCAA 57.562 33.333 0.00 0.00 0.00 3.67
2180 7807 6.970613 ACTTTTTGAAAGTGTATCGTCAAACC 59.029 34.615 5.34 0.00 0.00 3.27
2181 7808 7.694784 TCACTTTTTGAAAGTGTATCGTCAAAC 59.305 33.333 24.61 0.00 45.75 2.93
2225 7853 0.389426 TTCTTTCCTCGGCGCAGTAC 60.389 55.000 10.83 0.00 0.00 2.73
2234 7862 5.955488 TCTCACTGTATTCTTCTTTCCTCG 58.045 41.667 0.00 0.00 0.00 4.63
2248 7876 7.819415 CCAATCACAAGTAAAGATCTCACTGTA 59.181 37.037 9.95 0.00 0.00 2.74
2252 7880 7.672983 TTCCAATCACAAGTAAAGATCTCAC 57.327 36.000 0.00 0.00 0.00 3.51
2267 7895 3.978217 TGCGACGAAAATTTTCCAATCAC 59.022 39.130 22.15 13.02 33.68 3.06
2271 7899 4.918583 GGTAATGCGACGAAAATTTTCCAA 59.081 37.500 22.15 6.71 33.68 3.53
2272 7900 4.216687 AGGTAATGCGACGAAAATTTTCCA 59.783 37.500 22.15 15.33 33.68 3.53
2273 7901 4.729595 AGGTAATGCGACGAAAATTTTCC 58.270 39.130 22.15 10.71 33.68 3.13
2274 7902 5.963586 CCTAGGTAATGCGACGAAAATTTTC 59.036 40.000 19.08 19.08 0.00 2.29
2275 7903 5.644636 TCCTAGGTAATGCGACGAAAATTTT 59.355 36.000 9.08 2.28 0.00 1.82
2276 7904 5.180271 TCCTAGGTAATGCGACGAAAATTT 58.820 37.500 9.08 0.00 0.00 1.82
2277 7905 4.761975 TCCTAGGTAATGCGACGAAAATT 58.238 39.130 9.08 0.00 0.00 1.82
2279 7907 3.872511 TCCTAGGTAATGCGACGAAAA 57.127 42.857 9.08 0.00 0.00 2.29
2280 7908 3.872511 TTCCTAGGTAATGCGACGAAA 57.127 42.857 9.08 0.00 0.00 3.46
2283 7911 1.792949 GCATTCCTAGGTAATGCGACG 59.207 52.381 27.94 10.96 46.81 5.12
2295 7925 2.265367 TCACCTCAACAGGCATTCCTA 58.735 47.619 0.00 0.00 45.05 2.94
2320 7950 5.742562 TGGGGTCCCATTGAAATACTAAT 57.257 39.130 10.98 0.00 41.89 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.