Multiple sequence alignment - TraesCS5A01G555300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G555300 chr5A 100.000 3098 0 0 1 3098 706707358 706704261 0.000000e+00 5722.0
1 TraesCS5A01G555300 chr5A 97.163 141 3 1 2959 3098 606895778 606895918 1.440000e-58 237.0
2 TraesCS5A01G555300 chr5A 78.755 273 34 18 1286 1558 670425910 670425662 8.890000e-36 161.0
3 TraesCS5A01G555300 chr5A 86.861 137 15 3 1405 1540 706678162 706678028 1.920000e-32 150.0
4 TraesCS5A01G555300 chr4B 85.019 1562 150 50 571 2078 667262505 667264036 0.000000e+00 1511.0
5 TraesCS5A01G555300 chr4B 87.091 1038 94 17 571 1583 667289166 667290188 0.000000e+00 1138.0
6 TraesCS5A01G555300 chr4B 88.219 730 63 17 1105 1828 639268716 639269428 0.000000e+00 850.0
7 TraesCS5A01G555300 chr4B 87.929 729 68 16 1105 1828 639294292 639295005 0.000000e+00 841.0
8 TraesCS5A01G555300 chr4B 89.655 464 33 6 2506 2961 639323942 639324398 7.450000e-161 577.0
9 TraesCS5A01G555300 chr4B 87.500 448 49 3 1140 1583 667277707 667278151 7.660000e-141 510.0
10 TraesCS5A01G555300 chr4B 81.487 659 69 26 2075 2700 667264115 667264753 2.780000e-135 492.0
11 TraesCS5A01G555300 chr4B 81.684 475 55 17 2073 2532 667290907 667291364 1.760000e-97 366.0
12 TraesCS5A01G555300 chr4B 94.977 219 11 0 1828 2046 639269821 639270039 8.230000e-91 344.0
13 TraesCS5A01G555300 chr4B 80.842 475 59 18 2073 2532 667278868 667279325 8.230000e-91 344.0
14 TraesCS5A01G555300 chr4B 80.842 475 59 17 2073 2532 667294026 667294483 8.230000e-91 344.0
15 TraesCS5A01G555300 chr4B 95.238 210 10 0 1828 2037 639295398 639295607 1.780000e-87 333.0
16 TraesCS5A01G555300 chr4B 83.239 352 44 11 1691 2038 667278402 667278742 3.000000e-80 309.0
17 TraesCS5A01G555300 chr4B 82.997 347 35 16 1751 2084 667290503 667290838 3.020000e-75 292.0
18 TraesCS5A01G555300 chr4B 92.708 192 11 2 302 492 667266728 667266917 1.090000e-69 274.0
19 TraesCS5A01G555300 chr4B 85.606 264 28 6 1775 2038 667293647 667293900 5.090000e-68 268.0
20 TraesCS5A01G555300 chr4B 99.286 140 1 0 2959 3098 404768903 404768764 1.430000e-63 254.0
21 TraesCS5A01G555300 chr4B 97.143 140 3 1 2958 3096 17194181 17194042 5.160000e-58 235.0
22 TraesCS5A01G555300 chr4B 82.273 220 31 5 1845 2060 489293897 489293682 1.900000e-42 183.0
23 TraesCS5A01G555300 chr4B 79.297 256 42 7 1286 1540 489294230 489293985 5.310000e-38 169.0
24 TraesCS5A01G555300 chr4B 98.734 79 1 0 994 1072 667277622 667277700 1.160000e-29 141.0
25 TraesCS5A01G555300 chr4B 94.048 84 5 0 2087 2170 639295762 639295845 9.020000e-26 128.0
26 TraesCS5A01G555300 chr4B 92.754 69 5 0 928 996 667269851 667269919 1.970000e-17 100.0
27 TraesCS5A01G555300 chr4B 98.113 53 1 0 235 287 586454896 586454844 3.290000e-15 93.5
28 TraesCS5A01G555300 chrUn 93.532 773 25 8 2073 2834 30130774 30130016 0.000000e+00 1127.0
29 TraesCS5A01G555300 chrUn 91.289 551 16 7 1561 2080 30131399 30130850 0.000000e+00 723.0
30 TraesCS5A01G555300 chr1D 93.361 241 15 1 4 243 10592668 10592428 3.800000e-94 355.0
31 TraesCS5A01G555300 chr1D 89.879 247 21 2 1 243 481407060 481407306 6.450000e-82 315.0
32 TraesCS5A01G555300 chr1D 100.000 51 0 0 235 285 10592462 10592412 9.150000e-16 95.3
33 TraesCS5A01G555300 chr1D 98.113 53 1 0 235 287 401659351 401659299 3.290000e-15 93.5
34 TraesCS5A01G555300 chr1D 100.000 50 0 0 235 284 481407272 481407321 3.290000e-15 93.5
35 TraesCS5A01G555300 chr7B 93.249 237 16 0 7 243 748589512 748589276 1.770000e-92 350.0
36 TraesCS5A01G555300 chr7B 100.000 53 0 0 235 287 748589310 748589258 7.070000e-17 99.0
37 TraesCS5A01G555300 chr7B 92.063 63 4 1 235 297 58715204 58715265 1.530000e-13 87.9
38 TraesCS5A01G555300 chr7B 91.304 46 4 0 1083 1128 12955900 12955945 2.580000e-06 63.9
39 TraesCS5A01G555300 chr6A 92.531 241 17 1 4 243 455313953 455314193 8.230000e-91 344.0
40 TraesCS5A01G555300 chr5D 91.286 241 20 1 4 243 287569431 287569191 8.280000e-86 327.0
41 TraesCS5A01G555300 chr1B 89.712 243 22 3 4 243 453321797 453321555 1.080000e-79 307.0
42 TraesCS5A01G555300 chr1B 95.775 142 5 1 2958 3098 660660633 660660774 8.640000e-56 228.0
43 TraesCS5A01G555300 chr2B 88.608 237 26 1 7 243 507194134 507194369 1.410000e-73 287.0
44 TraesCS5A01G555300 chr2B 96.528 144 3 2 2957 3098 794676226 794676083 1.440000e-58 237.0
45 TraesCS5A01G555300 chr7A 86.920 237 28 3 7 241 38222959 38222724 2.370000e-66 263.0
46 TraesCS5A01G555300 chr7A 84.810 237 36 0 7 243 69905335 69905099 3.990000e-59 239.0
47 TraesCS5A01G555300 chr7A 93.182 44 3 0 332 375 519565492 519565449 7.170000e-07 65.8
48 TraesCS5A01G555300 chr6B 99.301 143 0 1 2957 3098 337861067 337861209 1.100000e-64 257.0
49 TraesCS5A01G555300 chr6B 99.296 142 0 1 2958 3098 315288891 315288750 3.960000e-64 255.0
50 TraesCS5A01G555300 chr5B 97.183 142 3 1 2958 3098 176624755 176624614 3.990000e-59 239.0
51 TraesCS5A01G555300 chr3B 94.595 148 6 2 2953 3098 41802205 41802352 8.640000e-56 228.0
52 TraesCS5A01G555300 chr4D 80.292 274 43 8 1286 1558 397158087 397157824 2.440000e-46 196.0
53 TraesCS5A01G555300 chr4D 79.197 274 31 18 1286 1558 488665848 488665600 1.910000e-37 167.0
54 TraesCS5A01G555300 chr4A 80.408 245 36 8 1845 2084 54405329 54405092 3.180000e-40 176.0
55 TraesCS5A01G555300 chr4A 83.036 112 19 0 7 118 669675087 669674976 5.470000e-18 102.0
56 TraesCS5A01G555300 chr4A 84.615 91 14 0 285 375 725933020 725932930 1.180000e-14 91.6
57 TraesCS5A01G555300 chr4A 76.984 126 22 5 1668 1788 689627526 689627403 7.170000e-07 65.8
58 TraesCS5A01G555300 chr7D 82.796 186 32 0 7 192 477837059 477837244 1.910000e-37 167.0
59 TraesCS5A01G555300 chr7D 100.000 32 0 0 1082 1113 69958388 69958419 3.340000e-05 60.2
60 TraesCS5A01G555300 chr6D 83.146 178 29 1 7 184 420896312 420896136 8.890000e-36 161.0
61 TraesCS5A01G555300 chr6D 94.737 38 2 0 1752 1789 375295926 375295889 3.340000e-05 60.2
62 TraesCS5A01G555300 chr2A 78.102 137 22 6 1668 1798 466975053 466974919 2.560000e-11 80.5
63 TraesCS5A01G555300 chr3A 95.349 43 2 0 1086 1128 543725008 543725050 5.540000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G555300 chr5A 706704261 706707358 3097 True 5722.00 5722 100.00000 1 3098 1 chr5A.!!$R3 3097
1 TraesCS5A01G555300 chr4B 639268716 639270039 1323 False 597.00 850 91.59800 1105 2046 2 chr4B.!!$F2 941
2 TraesCS5A01G555300 chr4B 667262505 667269919 7414 False 594.25 1511 87.99200 302 2700 4 chr4B.!!$F4 2398
3 TraesCS5A01G555300 chr4B 667289166 667294483 5317 False 481.60 1138 83.64400 571 2532 5 chr4B.!!$F6 1961
4 TraesCS5A01G555300 chr4B 639294292 639295845 1553 False 434.00 841 92.40500 1105 2170 3 chr4B.!!$F3 1065
5 TraesCS5A01G555300 chr4B 667277622 667279325 1703 False 326.00 510 87.57875 994 2532 4 chr4B.!!$F5 1538
6 TraesCS5A01G555300 chrUn 30130016 30131399 1383 True 925.00 1127 92.41050 1561 2834 2 chrUn.!!$R1 1273

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.035317 ACAGAATGCTGCAAGGTCGA 59.965 50.0 6.36 0.0 46.26 4.20 F
216 217 0.035317 AATGCTGCAAGGTCGACTGA 59.965 50.0 16.46 0.0 0.00 3.41 F
520 521 0.106868 CCGGGGCTTTAGGGTTTAGG 60.107 60.0 0.00 0.0 0.00 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1804 2131 0.251253 TCACACAGATGCCATTGCCA 60.251 50.000 0.00 0.00 36.33 4.92 R
2047 5899 3.148279 ATCCACCGGGCTCGAGTC 61.148 66.667 8.08 12.27 39.00 3.36 R
2284 6238 1.164041 AACTGCAGACGAAAACCCCG 61.164 55.000 23.35 0.00 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.932901 CAATGAAAATGTTGCAACGATACT 57.067 33.333 23.79 7.81 0.00 2.12
25 26 6.744418 CAATGAAAATGTTGCAACGATACTG 58.256 36.000 23.79 9.97 0.00 2.74
26 27 4.225984 TGAAAATGTTGCAACGATACTGC 58.774 39.130 23.79 10.61 40.35 4.40
31 32 2.925594 TGCAACGATACTGCAAGCA 58.074 47.368 0.00 0.00 46.47 3.91
32 33 1.233919 TGCAACGATACTGCAAGCAA 58.766 45.000 0.00 0.00 46.47 3.91
33 34 1.069296 TGCAACGATACTGCAAGCAAC 60.069 47.619 0.00 0.00 46.47 4.17
34 35 1.869503 CAACGATACTGCAAGCAACG 58.130 50.000 0.00 3.10 37.60 4.10
35 36 1.459209 CAACGATACTGCAAGCAACGA 59.541 47.619 13.90 0.00 37.60 3.85
36 37 1.068474 ACGATACTGCAAGCAACGAC 58.932 50.000 13.90 0.42 37.60 4.34
37 38 1.067693 CGATACTGCAAGCAACGACA 58.932 50.000 0.00 0.00 37.60 4.35
38 39 1.459209 CGATACTGCAAGCAACGACAA 59.541 47.619 0.00 0.00 37.60 3.18
39 40 2.721797 CGATACTGCAAGCAACGACAAC 60.722 50.000 0.00 0.00 37.60 3.32
40 41 1.657822 TACTGCAAGCAACGACAACA 58.342 45.000 0.00 0.00 37.60 3.33
41 42 1.024271 ACTGCAAGCAACGACAACAT 58.976 45.000 0.00 0.00 37.60 2.71
42 43 2.217750 ACTGCAAGCAACGACAACATA 58.782 42.857 0.00 0.00 37.60 2.29
43 44 2.813754 ACTGCAAGCAACGACAACATAT 59.186 40.909 0.00 0.00 37.60 1.78
44 45 3.165890 CTGCAAGCAACGACAACATATG 58.834 45.455 0.00 0.00 0.00 1.78
45 46 5.808076 ACTGCAAGCAACGACAACATATGT 61.808 41.667 1.41 1.41 41.79 2.29
46 47 3.748568 TGCAAGCAACGACAACATATGTA 59.251 39.130 9.21 0.00 44.12 2.29
47 48 4.214332 TGCAAGCAACGACAACATATGTAA 59.786 37.500 9.21 0.00 44.12 2.41
48 49 4.553429 GCAAGCAACGACAACATATGTAAC 59.447 41.667 9.21 3.04 44.12 2.50
49 50 5.684850 CAAGCAACGACAACATATGTAACA 58.315 37.500 9.21 0.00 44.12 2.41
50 51 5.933187 AGCAACGACAACATATGTAACAA 57.067 34.783 9.21 0.00 44.12 2.83
51 52 5.685841 AGCAACGACAACATATGTAACAAC 58.314 37.500 9.21 0.00 44.12 3.32
52 53 4.849383 GCAACGACAACATATGTAACAACC 59.151 41.667 9.21 0.00 44.12 3.77
53 54 4.914312 ACGACAACATATGTAACAACCG 57.086 40.909 9.21 9.54 44.12 4.44
54 55 4.309099 ACGACAACATATGTAACAACCGT 58.691 39.130 9.21 10.12 44.12 4.83
55 56 4.751098 ACGACAACATATGTAACAACCGTT 59.249 37.500 9.21 0.00 44.12 4.44
56 57 5.107375 ACGACAACATATGTAACAACCGTTC 60.107 40.000 9.21 0.00 44.12 3.95
57 58 5.119588 CGACAACATATGTAACAACCGTTCT 59.880 40.000 9.21 0.00 44.12 3.01
58 59 6.236017 ACAACATATGTAACAACCGTTCTG 57.764 37.500 9.21 1.58 41.63 3.02
59 60 5.180492 ACAACATATGTAACAACCGTTCTGG 59.820 40.000 9.21 0.00 41.63 3.86
61 62 7.955426 ACAACATATGTAACAACCGTTCTGGTA 60.955 37.037 9.21 0.00 46.65 3.25
73 74 5.365403 CCGTTCTGGTAAAAATGCTACAA 57.635 39.130 0.00 0.00 0.00 2.41
74 75 5.151389 CCGTTCTGGTAAAAATGCTACAAC 58.849 41.667 0.00 0.00 0.00 3.32
75 76 5.151389 CGTTCTGGTAAAAATGCTACAACC 58.849 41.667 0.00 0.00 0.00 3.77
76 77 5.151389 GTTCTGGTAAAAATGCTACAACCG 58.849 41.667 0.00 0.00 0.00 4.44
77 78 4.391155 TCTGGTAAAAATGCTACAACCGT 58.609 39.130 0.00 0.00 0.00 4.83
78 79 4.453136 TCTGGTAAAAATGCTACAACCGTC 59.547 41.667 0.00 0.00 0.00 4.79
79 80 4.135306 TGGTAAAAATGCTACAACCGTCA 58.865 39.130 0.00 0.00 0.00 4.35
80 81 4.579340 TGGTAAAAATGCTACAACCGTCAA 59.421 37.500 0.00 0.00 0.00 3.18
81 82 5.067413 TGGTAAAAATGCTACAACCGTCAAA 59.933 36.000 0.00 0.00 0.00 2.69
82 83 5.627780 GGTAAAAATGCTACAACCGTCAAAG 59.372 40.000 0.00 0.00 0.00 2.77
83 84 5.508200 AAAAATGCTACAACCGTCAAAGA 57.492 34.783 0.00 0.00 0.00 2.52
84 85 5.508200 AAAATGCTACAACCGTCAAAGAA 57.492 34.783 0.00 0.00 0.00 2.52
85 86 4.749245 AATGCTACAACCGTCAAAGAAG 57.251 40.909 0.00 0.00 0.00 2.85
86 87 3.462483 TGCTACAACCGTCAAAGAAGA 57.538 42.857 0.00 0.00 0.00 2.87
87 88 3.799366 TGCTACAACCGTCAAAGAAGAA 58.201 40.909 0.00 0.00 0.00 2.52
88 89 3.807622 TGCTACAACCGTCAAAGAAGAAG 59.192 43.478 0.00 0.00 0.00 2.85
89 90 3.186613 GCTACAACCGTCAAAGAAGAAGG 59.813 47.826 0.00 0.00 42.04 3.46
93 94 1.947456 ACCGTCAAAGAAGAAGGTTGC 59.053 47.619 0.00 0.00 46.12 4.17
94 95 1.946768 CCGTCAAAGAAGAAGGTTGCA 59.053 47.619 0.00 0.00 33.23 4.08
95 96 2.357637 CCGTCAAAGAAGAAGGTTGCAA 59.642 45.455 0.00 0.00 33.23 4.08
96 97 3.363178 CGTCAAAGAAGAAGGTTGCAAC 58.637 45.455 21.59 21.59 0.00 4.17
105 106 4.397348 GGTTGCAACCGGTGAGAT 57.603 55.556 31.73 0.00 39.66 2.75
106 107 1.875963 GGTTGCAACCGGTGAGATG 59.124 57.895 31.73 3.06 39.66 2.90
107 108 0.605319 GGTTGCAACCGGTGAGATGA 60.605 55.000 31.73 0.00 39.66 2.92
108 109 1.453155 GTTGCAACCGGTGAGATGAT 58.547 50.000 19.15 0.00 0.00 2.45
109 110 1.131126 GTTGCAACCGGTGAGATGATG 59.869 52.381 19.15 0.75 0.00 3.07
110 111 0.324614 TGCAACCGGTGAGATGATGT 59.675 50.000 8.52 0.00 0.00 3.06
111 112 0.729116 GCAACCGGTGAGATGATGTG 59.271 55.000 8.52 0.00 0.00 3.21
112 113 0.729116 CAACCGGTGAGATGATGTGC 59.271 55.000 8.52 0.00 0.00 4.57
113 114 0.615331 AACCGGTGAGATGATGTGCT 59.385 50.000 8.52 0.00 0.00 4.40
114 115 0.107993 ACCGGTGAGATGATGTGCTG 60.108 55.000 6.12 0.00 0.00 4.41
115 116 1.434622 CCGGTGAGATGATGTGCTGC 61.435 60.000 0.00 0.00 0.00 5.25
116 117 0.741927 CGGTGAGATGATGTGCTGCA 60.742 55.000 0.00 0.00 0.00 4.41
117 118 1.456296 GGTGAGATGATGTGCTGCAA 58.544 50.000 2.77 0.00 0.00 4.08
118 119 2.022195 GGTGAGATGATGTGCTGCAAT 58.978 47.619 2.77 0.02 0.00 3.56
119 120 2.033049 GGTGAGATGATGTGCTGCAATC 59.967 50.000 2.77 10.46 0.00 2.67
120 121 1.937899 TGAGATGATGTGCTGCAATCG 59.062 47.619 2.77 0.00 0.00 3.34
121 122 2.207590 GAGATGATGTGCTGCAATCGA 58.792 47.619 2.77 0.00 0.00 3.59
122 123 2.806818 GAGATGATGTGCTGCAATCGAT 59.193 45.455 2.77 0.00 0.00 3.59
123 124 2.548480 AGATGATGTGCTGCAATCGATG 59.452 45.455 2.77 0.00 0.00 3.84
124 125 2.027003 TGATGTGCTGCAATCGATGA 57.973 45.000 2.77 0.00 0.00 2.92
125 126 1.937899 TGATGTGCTGCAATCGATGAG 59.062 47.619 2.77 0.00 0.00 2.90
126 127 1.263484 GATGTGCTGCAATCGATGAGG 59.737 52.381 2.77 0.00 0.00 3.86
127 128 0.249955 TGTGCTGCAATCGATGAGGA 59.750 50.000 2.77 0.00 0.00 3.71
128 129 1.338960 TGTGCTGCAATCGATGAGGAA 60.339 47.619 2.77 0.00 0.00 3.36
129 130 1.063174 GTGCTGCAATCGATGAGGAAC 59.937 52.381 2.77 0.00 0.00 3.62
130 131 0.302890 GCTGCAATCGATGAGGAACG 59.697 55.000 0.00 0.00 0.00 3.95
131 132 0.302890 CTGCAATCGATGAGGAACGC 59.697 55.000 0.00 0.00 0.00 4.84
132 133 1.089481 TGCAATCGATGAGGAACGCC 61.089 55.000 0.00 0.00 0.00 5.68
133 134 1.089481 GCAATCGATGAGGAACGCCA 61.089 55.000 0.00 0.00 36.29 5.69
134 135 1.586422 CAATCGATGAGGAACGCCAT 58.414 50.000 0.00 0.00 36.29 4.40
135 136 1.262417 CAATCGATGAGGAACGCCATG 59.738 52.381 0.00 0.00 36.29 3.66
136 137 0.882042 ATCGATGAGGAACGCCATGC 60.882 55.000 0.00 0.00 36.29 4.06
137 138 1.522355 CGATGAGGAACGCCATGCT 60.522 57.895 0.00 0.00 36.29 3.79
138 139 0.249447 CGATGAGGAACGCCATGCTA 60.249 55.000 0.00 0.00 36.29 3.49
139 140 1.221414 GATGAGGAACGCCATGCTAC 58.779 55.000 0.00 0.00 36.29 3.58
140 141 0.541392 ATGAGGAACGCCATGCTACA 59.459 50.000 0.00 0.00 36.29 2.74
141 142 0.323302 TGAGGAACGCCATGCTACAA 59.677 50.000 0.00 0.00 36.29 2.41
142 143 0.727398 GAGGAACGCCATGCTACAAC 59.273 55.000 0.00 0.00 36.29 3.32
143 144 0.676782 AGGAACGCCATGCTACAACC 60.677 55.000 0.00 0.00 36.29 3.77
144 145 0.958382 GGAACGCCATGCTACAACCA 60.958 55.000 0.00 0.00 0.00 3.67
145 146 0.447801 GAACGCCATGCTACAACCAG 59.552 55.000 0.00 0.00 0.00 4.00
146 147 0.250727 AACGCCATGCTACAACCAGT 60.251 50.000 0.00 0.00 0.00 4.00
147 148 0.611200 ACGCCATGCTACAACCAGTA 59.389 50.000 0.00 0.00 0.00 2.74
148 149 1.002659 ACGCCATGCTACAACCAGTAA 59.997 47.619 0.00 0.00 30.92 2.24
149 150 1.665679 CGCCATGCTACAACCAGTAAG 59.334 52.381 0.00 0.00 30.92 2.34
150 151 2.676750 CGCCATGCTACAACCAGTAAGA 60.677 50.000 0.00 0.00 30.92 2.10
151 152 3.545703 GCCATGCTACAACCAGTAAGAT 58.454 45.455 0.00 0.00 30.92 2.40
152 153 3.313526 GCCATGCTACAACCAGTAAGATG 59.686 47.826 0.00 0.00 30.92 2.90
153 154 3.879295 CCATGCTACAACCAGTAAGATGG 59.121 47.826 0.00 0.00 46.47 3.51
154 155 4.384098 CCATGCTACAACCAGTAAGATGGA 60.384 45.833 0.00 0.00 43.57 3.41
155 156 5.371526 CATGCTACAACCAGTAAGATGGAT 58.628 41.667 0.00 0.00 43.57 3.41
156 157 4.769688 TGCTACAACCAGTAAGATGGATG 58.230 43.478 0.00 0.43 45.85 3.51
160 161 4.361451 CAACCAGTAAGATGGATGTTGC 57.639 45.455 0.00 0.00 43.57 4.17
161 162 3.719268 ACCAGTAAGATGGATGTTGCA 57.281 42.857 0.00 0.00 43.57 4.08
162 163 4.032960 ACCAGTAAGATGGATGTTGCAA 57.967 40.909 0.00 0.00 43.57 4.08
163 164 3.758554 ACCAGTAAGATGGATGTTGCAAC 59.241 43.478 22.83 22.83 43.57 4.17
164 165 3.129287 CCAGTAAGATGGATGTTGCAACC 59.871 47.826 26.14 12.24 43.57 3.77
165 166 3.009723 AGTAAGATGGATGTTGCAACCG 58.990 45.455 26.14 0.00 0.00 4.44
166 167 1.176527 AAGATGGATGTTGCAACCGG 58.823 50.000 26.14 0.00 0.00 5.28
167 168 1.139520 GATGGATGTTGCAACCGGC 59.860 57.895 26.14 14.78 45.13 6.13
208 209 1.250328 TGGAACAGAATGCTGCAAGG 58.750 50.000 6.36 0.00 46.26 3.61
209 210 1.251251 GGAACAGAATGCTGCAAGGT 58.749 50.000 6.36 0.00 46.26 3.50
210 211 1.200948 GGAACAGAATGCTGCAAGGTC 59.799 52.381 6.36 5.37 46.26 3.85
211 212 0.877071 AACAGAATGCTGCAAGGTCG 59.123 50.000 6.36 4.44 46.26 4.79
212 213 0.035317 ACAGAATGCTGCAAGGTCGA 59.965 50.000 6.36 0.00 46.26 4.20
213 214 0.445436 CAGAATGCTGCAAGGTCGAC 59.555 55.000 6.36 7.13 34.95 4.20
214 215 0.322975 AGAATGCTGCAAGGTCGACT 59.677 50.000 16.46 0.00 0.00 4.18
215 216 0.445436 GAATGCTGCAAGGTCGACTG 59.555 55.000 16.46 8.03 0.00 3.51
216 217 0.035317 AATGCTGCAAGGTCGACTGA 59.965 50.000 16.46 0.00 0.00 3.41
217 218 0.390866 ATGCTGCAAGGTCGACTGAG 60.391 55.000 16.46 6.42 0.00 3.35
218 219 1.290324 GCTGCAAGGTCGACTGAGA 59.710 57.895 16.46 0.00 0.00 3.27
219 220 1.011451 GCTGCAAGGTCGACTGAGAC 61.011 60.000 16.46 0.00 40.25 3.36
220 221 0.600557 CTGCAAGGTCGACTGAGACT 59.399 55.000 16.46 0.00 40.76 3.24
221 222 1.000283 CTGCAAGGTCGACTGAGACTT 60.000 52.381 16.46 6.85 40.76 3.01
222 223 1.000163 TGCAAGGTCGACTGAGACTTC 60.000 52.381 16.46 5.12 40.76 3.01
223 224 1.970447 CAAGGTCGACTGAGACTTCG 58.030 55.000 16.46 1.90 40.76 3.79
224 225 1.267261 CAAGGTCGACTGAGACTTCGT 59.733 52.381 16.46 0.00 40.76 3.85
225 226 1.606903 AGGTCGACTGAGACTTCGTT 58.393 50.000 16.46 0.00 40.76 3.85
226 227 2.775890 AGGTCGACTGAGACTTCGTTA 58.224 47.619 16.46 0.00 40.76 3.18
227 228 3.144506 AGGTCGACTGAGACTTCGTTAA 58.855 45.455 16.46 0.00 40.76 2.01
228 229 3.567164 AGGTCGACTGAGACTTCGTTAAA 59.433 43.478 16.46 0.00 40.76 1.52
229 230 4.217983 AGGTCGACTGAGACTTCGTTAAAT 59.782 41.667 16.46 0.00 40.76 1.40
230 231 4.558080 GGTCGACTGAGACTTCGTTAAATC 59.442 45.833 16.46 0.00 40.76 2.17
231 232 5.392286 GTCGACTGAGACTTCGTTAAATCT 58.608 41.667 8.70 0.00 38.09 2.40
232 233 5.508922 GTCGACTGAGACTTCGTTAAATCTC 59.491 44.000 8.70 0.00 38.09 2.75
233 234 5.180680 TCGACTGAGACTTCGTTAAATCTCA 59.819 40.000 3.03 3.03 44.05 3.27
237 238 5.391449 TGAGACTTCGTTAAATCTCAGTCG 58.609 41.667 0.00 0.00 41.99 4.18
238 239 5.180680 TGAGACTTCGTTAAATCTCAGTCGA 59.819 40.000 0.00 0.00 41.99 4.20
239 240 5.392286 AGACTTCGTTAAATCTCAGTCGAC 58.608 41.667 7.70 7.70 36.56 4.20
240 241 5.181622 AGACTTCGTTAAATCTCAGTCGACT 59.818 40.000 13.58 13.58 36.56 4.18
241 242 5.154932 ACTTCGTTAAATCTCAGTCGACTG 58.845 41.667 34.76 34.76 45.08 3.51
256 257 5.667978 GTCGACTGAGACTTCGTTAAATC 57.332 43.478 8.70 0.00 38.09 2.17
257 258 5.392286 GTCGACTGAGACTTCGTTAAATCT 58.608 41.667 8.70 0.00 38.09 2.40
258 259 5.508922 GTCGACTGAGACTTCGTTAAATCTC 59.491 44.000 8.70 0.00 38.09 2.75
259 260 5.180680 TCGACTGAGACTTCGTTAAATCTCA 59.819 40.000 3.03 3.03 44.05 3.27
263 264 5.391449 TGAGACTTCGTTAAATCTCAGTCG 58.609 41.667 0.00 0.00 41.99 4.18
264 265 5.180680 TGAGACTTCGTTAAATCTCAGTCGA 59.819 40.000 0.00 0.00 41.99 4.20
265 266 5.392286 AGACTTCGTTAAATCTCAGTCGAC 58.608 41.667 7.70 7.70 36.56 4.20
266 267 5.181622 AGACTTCGTTAAATCTCAGTCGACT 59.818 40.000 13.58 13.58 36.56 4.18
267 268 5.154932 ACTTCGTTAAATCTCAGTCGACTG 58.845 41.667 34.76 34.76 45.08 3.51
280 281 4.398247 CAGTCGACTGATTTTTAGCAAGC 58.602 43.478 36.73 0.00 46.59 4.01
281 282 3.437049 AGTCGACTGATTTTTAGCAAGCC 59.563 43.478 19.30 0.00 0.00 4.35
282 283 2.747446 TCGACTGATTTTTAGCAAGCCC 59.253 45.455 0.00 0.00 0.00 5.19
283 284 2.476185 CGACTGATTTTTAGCAAGCCCG 60.476 50.000 0.00 0.00 0.00 6.13
284 285 2.488153 GACTGATTTTTAGCAAGCCCGT 59.512 45.455 0.00 0.00 0.00 5.28
285 286 3.681593 ACTGATTTTTAGCAAGCCCGTA 58.318 40.909 0.00 0.00 0.00 4.02
286 287 4.076394 ACTGATTTTTAGCAAGCCCGTAA 58.924 39.130 0.00 0.00 0.00 3.18
287 288 4.082949 ACTGATTTTTAGCAAGCCCGTAAC 60.083 41.667 0.00 0.00 0.00 2.50
288 289 4.076394 TGATTTTTAGCAAGCCCGTAACT 58.924 39.130 0.00 0.00 0.00 2.24
289 290 5.247084 TGATTTTTAGCAAGCCCGTAACTA 58.753 37.500 0.00 0.00 0.00 2.24
290 291 5.883673 TGATTTTTAGCAAGCCCGTAACTAT 59.116 36.000 0.00 0.00 0.00 2.12
291 292 6.376018 TGATTTTTAGCAAGCCCGTAACTATT 59.624 34.615 0.00 0.00 0.00 1.73
292 293 7.553402 TGATTTTTAGCAAGCCCGTAACTATTA 59.447 33.333 0.00 0.00 0.00 0.98
293 294 7.684937 TTTTTAGCAAGCCCGTAACTATTAA 57.315 32.000 0.00 0.00 0.00 1.40
294 295 6.913873 TTTAGCAAGCCCGTAACTATTAAG 57.086 37.500 0.00 0.00 0.00 1.85
295 296 3.203716 AGCAAGCCCGTAACTATTAAGC 58.796 45.455 0.00 0.00 0.00 3.09
296 297 2.940410 GCAAGCCCGTAACTATTAAGCA 59.060 45.455 0.00 0.00 0.00 3.91
297 298 3.002348 GCAAGCCCGTAACTATTAAGCAG 59.998 47.826 0.00 0.00 0.00 4.24
298 299 4.439057 CAAGCCCGTAACTATTAAGCAGA 58.561 43.478 0.00 0.00 0.00 4.26
299 300 4.323553 AGCCCGTAACTATTAAGCAGAG 57.676 45.455 0.00 0.00 0.00 3.35
300 301 3.705072 AGCCCGTAACTATTAAGCAGAGT 59.295 43.478 0.00 0.00 0.00 3.24
301 302 4.891756 AGCCCGTAACTATTAAGCAGAGTA 59.108 41.667 0.00 0.00 0.00 2.59
302 303 5.539193 AGCCCGTAACTATTAAGCAGAGTAT 59.461 40.000 0.00 0.00 0.00 2.12
303 304 6.718454 AGCCCGTAACTATTAAGCAGAGTATA 59.282 38.462 0.00 0.00 0.00 1.47
304 305 7.028361 GCCCGTAACTATTAAGCAGAGTATAG 58.972 42.308 0.00 0.00 0.00 1.31
305 306 7.094463 GCCCGTAACTATTAAGCAGAGTATAGA 60.094 40.741 0.00 0.00 0.00 1.98
306 307 8.235905 CCCGTAACTATTAAGCAGAGTATAGAC 58.764 40.741 0.00 0.00 0.00 2.59
307 308 9.001542 CCGTAACTATTAAGCAGAGTATAGACT 57.998 37.037 0.00 0.00 39.20 3.24
317 318 7.585579 AGCAGAGTATAGACTAAAGGTAACC 57.414 40.000 0.00 0.00 35.45 2.85
318 319 7.124052 AGCAGAGTATAGACTAAAGGTAACCA 58.876 38.462 0.00 0.00 35.45 3.67
319 320 7.785506 AGCAGAGTATAGACTAAAGGTAACCAT 59.214 37.037 0.00 0.00 35.45 3.55
320 321 7.868415 GCAGAGTATAGACTAAAGGTAACCATG 59.132 40.741 0.00 0.00 35.45 3.66
321 322 8.361139 CAGAGTATAGACTAAAGGTAACCATGG 58.639 40.741 11.19 11.19 35.45 3.66
322 323 7.015389 AGAGTATAGACTAAAGGTAACCATGGC 59.985 40.741 13.04 0.00 35.45 4.40
323 324 3.646736 AGACTAAAGGTAACCATGGCC 57.353 47.619 13.04 5.04 37.17 5.36
324 325 2.093128 AGACTAAAGGTAACCATGGCCG 60.093 50.000 13.04 0.00 37.17 6.13
325 326 1.910671 ACTAAAGGTAACCATGGCCGA 59.089 47.619 13.04 0.00 37.17 5.54
326 327 2.306512 ACTAAAGGTAACCATGGCCGAA 59.693 45.455 13.04 0.00 37.17 4.30
327 328 2.525105 AAAGGTAACCATGGCCGAAT 57.475 45.000 13.04 0.00 37.17 3.34
328 329 2.525105 AAGGTAACCATGGCCGAATT 57.475 45.000 13.04 0.00 37.17 2.17
329 330 3.655615 AAGGTAACCATGGCCGAATTA 57.344 42.857 13.04 0.00 37.17 1.40
330 331 3.876309 AGGTAACCATGGCCGAATTAT 57.124 42.857 13.04 0.00 37.17 1.28
331 332 4.178956 AGGTAACCATGGCCGAATTATT 57.821 40.909 13.04 0.00 37.17 1.40
332 333 5.313280 AGGTAACCATGGCCGAATTATTA 57.687 39.130 13.04 0.00 37.17 0.98
333 334 5.067954 AGGTAACCATGGCCGAATTATTAC 58.932 41.667 13.04 10.11 37.17 1.89
334 335 4.822896 GGTAACCATGGCCGAATTATTACA 59.177 41.667 13.04 0.00 0.00 2.41
335 336 5.299782 GGTAACCATGGCCGAATTATTACAA 59.700 40.000 13.04 0.00 0.00 2.41
336 337 5.514274 AACCATGGCCGAATTATTACAAG 57.486 39.130 13.04 0.00 0.00 3.16
337 338 4.787551 ACCATGGCCGAATTATTACAAGA 58.212 39.130 13.04 0.00 0.00 3.02
338 339 5.385198 ACCATGGCCGAATTATTACAAGAT 58.615 37.500 13.04 0.00 0.00 2.40
339 340 6.539173 ACCATGGCCGAATTATTACAAGATA 58.461 36.000 13.04 0.00 0.00 1.98
340 341 7.175104 ACCATGGCCGAATTATTACAAGATAT 58.825 34.615 13.04 0.00 0.00 1.63
341 342 7.121168 ACCATGGCCGAATTATTACAAGATATG 59.879 37.037 13.04 0.00 0.00 1.78
342 343 7.336679 CCATGGCCGAATTATTACAAGATATGA 59.663 37.037 0.00 0.00 0.00 2.15
343 344 8.729756 CATGGCCGAATTATTACAAGATATGAA 58.270 33.333 0.00 0.00 0.00 2.57
344 345 8.684386 TGGCCGAATTATTACAAGATATGAAA 57.316 30.769 0.00 0.00 0.00 2.69
345 346 9.295825 TGGCCGAATTATTACAAGATATGAAAT 57.704 29.630 0.00 0.00 0.00 2.17
365 366 9.647797 ATGAAATTAACACATACGACTAAGTCA 57.352 29.630 0.00 0.00 32.09 3.41
366 367 9.478768 TGAAATTAACACATACGACTAAGTCAA 57.521 29.630 0.00 0.00 32.09 3.18
371 372 9.701098 TTAACACATACGACTAAGTCAAAATCT 57.299 29.630 0.00 0.00 32.09 2.40
372 373 8.603242 AACACATACGACTAAGTCAAAATCTT 57.397 30.769 0.00 0.00 32.09 2.40
373 374 8.240883 ACACATACGACTAAGTCAAAATCTTC 57.759 34.615 0.00 0.00 32.09 2.87
374 375 7.331193 ACACATACGACTAAGTCAAAATCTTCC 59.669 37.037 0.00 0.00 32.09 3.46
375 376 6.817140 ACATACGACTAAGTCAAAATCTTCCC 59.183 38.462 0.00 0.00 32.09 3.97
376 377 5.223449 ACGACTAAGTCAAAATCTTCCCA 57.777 39.130 0.00 0.00 32.09 4.37
377 378 5.805728 ACGACTAAGTCAAAATCTTCCCAT 58.194 37.500 0.00 0.00 32.09 4.00
378 379 6.238648 ACGACTAAGTCAAAATCTTCCCATT 58.761 36.000 0.00 0.00 32.09 3.16
379 380 7.391620 ACGACTAAGTCAAAATCTTCCCATTA 58.608 34.615 0.00 0.00 32.09 1.90
380 381 7.881232 ACGACTAAGTCAAAATCTTCCCATTAA 59.119 33.333 0.00 0.00 32.09 1.40
381 382 8.893727 CGACTAAGTCAAAATCTTCCCATTAAT 58.106 33.333 0.00 0.00 32.09 1.40
383 384 8.470002 ACTAAGTCAAAATCTTCCCATTAATGC 58.530 33.333 10.11 0.00 0.00 3.56
384 385 6.225981 AGTCAAAATCTTCCCATTAATGCC 57.774 37.500 10.11 0.00 0.00 4.40
385 386 5.960202 AGTCAAAATCTTCCCATTAATGCCT 59.040 36.000 10.11 0.00 0.00 4.75
386 387 6.441604 AGTCAAAATCTTCCCATTAATGCCTT 59.558 34.615 10.11 0.00 0.00 4.35
387 388 7.038088 AGTCAAAATCTTCCCATTAATGCCTTT 60.038 33.333 10.11 0.85 0.00 3.11
388 389 8.257306 GTCAAAATCTTCCCATTAATGCCTTTA 58.743 33.333 10.11 0.00 0.00 1.85
389 390 8.820831 TCAAAATCTTCCCATTAATGCCTTTAA 58.179 29.630 10.11 0.00 34.37 1.52
390 391 9.101655 CAAAATCTTCCCATTAATGCCTTTAAG 57.898 33.333 10.11 8.12 33.40 1.85
391 392 8.608185 AAATCTTCCCATTAATGCCTTTAAGA 57.392 30.769 10.11 12.37 33.40 2.10
392 393 8.608185 AATCTTCCCATTAATGCCTTTAAGAA 57.392 30.769 10.11 3.47 33.40 2.52
393 394 7.645058 TCTTCCCATTAATGCCTTTAAGAAG 57.355 36.000 10.11 11.34 34.27 2.85
403 404 2.710096 CTTTAAGAAGGGATCGGCCA 57.290 50.000 2.24 0.00 38.95 5.36
404 405 2.999331 CTTTAAGAAGGGATCGGCCAA 58.001 47.619 2.24 0.00 38.95 4.52
405 406 3.555966 CTTTAAGAAGGGATCGGCCAAT 58.444 45.455 2.24 0.00 38.95 3.16
406 407 2.638480 TAAGAAGGGATCGGCCAATG 57.362 50.000 2.24 0.00 38.95 2.82
407 408 0.918983 AAGAAGGGATCGGCCAATGA 59.081 50.000 2.24 0.00 38.95 2.57
408 409 0.918983 AGAAGGGATCGGCCAATGAA 59.081 50.000 2.24 0.00 38.95 2.57
409 410 1.496429 AGAAGGGATCGGCCAATGAAT 59.504 47.619 2.24 0.00 38.95 2.57
410 411 2.711009 AGAAGGGATCGGCCAATGAATA 59.289 45.455 2.24 0.00 38.95 1.75
411 412 2.568623 AGGGATCGGCCAATGAATAC 57.431 50.000 2.24 0.00 38.95 1.89
412 413 1.073923 AGGGATCGGCCAATGAATACC 59.926 52.381 2.24 0.00 38.95 2.73
413 414 1.202879 GGGATCGGCCAATGAATACCA 60.203 52.381 2.24 0.00 38.95 3.25
414 415 2.154462 GGATCGGCCAATGAATACCAG 58.846 52.381 2.24 0.00 36.34 4.00
415 416 1.537202 GATCGGCCAATGAATACCAGC 59.463 52.381 2.24 0.00 0.00 4.85
416 417 0.254462 TCGGCCAATGAATACCAGCA 59.746 50.000 2.24 0.00 0.00 4.41
417 418 0.381801 CGGCCAATGAATACCAGCAC 59.618 55.000 2.24 0.00 0.00 4.40
418 419 1.473258 GGCCAATGAATACCAGCACA 58.527 50.000 0.00 0.00 0.00 4.57
419 420 2.034124 GGCCAATGAATACCAGCACAT 58.966 47.619 0.00 0.00 0.00 3.21
420 421 2.035066 GGCCAATGAATACCAGCACATC 59.965 50.000 0.00 0.00 0.00 3.06
421 422 2.287188 GCCAATGAATACCAGCACATCG 60.287 50.000 0.00 0.00 0.00 3.84
422 423 2.291465 CCAATGAATACCAGCACATCGG 59.709 50.000 0.00 0.00 0.00 4.18
423 424 1.597742 ATGAATACCAGCACATCGGC 58.402 50.000 0.00 0.00 0.00 5.54
424 425 0.251634 TGAATACCAGCACATCGGCA 59.748 50.000 0.00 0.00 35.83 5.69
425 426 1.339535 TGAATACCAGCACATCGGCAA 60.340 47.619 0.00 0.00 35.83 4.52
426 427 1.742831 GAATACCAGCACATCGGCAAA 59.257 47.619 0.00 0.00 35.83 3.68
427 428 2.057137 ATACCAGCACATCGGCAAAT 57.943 45.000 0.00 0.00 35.83 2.32
428 429 2.700722 TACCAGCACATCGGCAAATA 57.299 45.000 0.00 0.00 35.83 1.40
429 430 1.382522 ACCAGCACATCGGCAAATAG 58.617 50.000 0.00 0.00 35.83 1.73
430 431 1.065491 ACCAGCACATCGGCAAATAGA 60.065 47.619 0.00 0.00 35.83 1.98
431 432 1.600957 CCAGCACATCGGCAAATAGAG 59.399 52.381 0.00 0.00 35.83 2.43
432 433 2.554142 CAGCACATCGGCAAATAGAGA 58.446 47.619 0.00 0.00 35.83 3.10
433 434 2.286294 CAGCACATCGGCAAATAGAGAC 59.714 50.000 0.00 0.00 35.83 3.36
434 435 2.093500 AGCACATCGGCAAATAGAGACA 60.093 45.455 0.00 0.00 35.83 3.41
435 436 2.677836 GCACATCGGCAAATAGAGACAA 59.322 45.455 0.00 0.00 0.00 3.18
436 437 3.485877 GCACATCGGCAAATAGAGACAAC 60.486 47.826 0.00 0.00 0.00 3.32
437 438 3.684305 CACATCGGCAAATAGAGACAACA 59.316 43.478 0.00 0.00 0.00 3.33
438 439 4.333649 CACATCGGCAAATAGAGACAACAT 59.666 41.667 0.00 0.00 0.00 2.71
439 440 4.572389 ACATCGGCAAATAGAGACAACATC 59.428 41.667 0.00 0.00 0.00 3.06
440 441 4.471904 TCGGCAAATAGAGACAACATCT 57.528 40.909 0.00 0.00 41.91 2.90
441 442 4.832248 TCGGCAAATAGAGACAACATCTT 58.168 39.130 0.00 0.00 38.00 2.40
442 443 4.870426 TCGGCAAATAGAGACAACATCTTC 59.130 41.667 0.00 0.00 38.00 2.87
443 444 4.631377 CGGCAAATAGAGACAACATCTTCA 59.369 41.667 0.00 0.00 38.00 3.02
444 445 5.122239 CGGCAAATAGAGACAACATCTTCAA 59.878 40.000 0.00 0.00 38.00 2.69
445 446 6.317857 GGCAAATAGAGACAACATCTTCAAC 58.682 40.000 0.00 0.00 38.00 3.18
446 447 6.072508 GGCAAATAGAGACAACATCTTCAACA 60.073 38.462 0.00 0.00 38.00 3.33
447 448 7.362662 GCAAATAGAGACAACATCTTCAACAA 58.637 34.615 0.00 0.00 38.00 2.83
448 449 7.536622 GCAAATAGAGACAACATCTTCAACAAG 59.463 37.037 0.00 0.00 38.00 3.16
449 450 7.678947 AATAGAGACAACATCTTCAACAAGG 57.321 36.000 0.00 0.00 38.00 3.61
450 451 5.041191 AGAGACAACATCTTCAACAAGGT 57.959 39.130 0.00 0.00 38.00 3.50
451 452 6.174720 AGAGACAACATCTTCAACAAGGTA 57.825 37.500 0.00 0.00 38.00 3.08
452 453 6.591935 AGAGACAACATCTTCAACAAGGTAA 58.408 36.000 0.00 0.00 38.00 2.85
453 454 7.227156 AGAGACAACATCTTCAACAAGGTAAT 58.773 34.615 0.00 0.00 38.00 1.89
454 455 7.173907 AGAGACAACATCTTCAACAAGGTAATG 59.826 37.037 0.00 0.00 38.00 1.90
455 456 6.772716 AGACAACATCTTCAACAAGGTAATGT 59.227 34.615 0.00 0.00 31.62 2.71
456 457 6.970484 ACAACATCTTCAACAAGGTAATGTC 58.030 36.000 0.00 0.00 28.88 3.06
457 458 5.862924 ACATCTTCAACAAGGTAATGTCG 57.137 39.130 0.00 0.00 31.81 4.35
458 459 4.154195 ACATCTTCAACAAGGTAATGTCGC 59.846 41.667 0.00 0.00 31.81 5.19
459 460 3.734463 TCTTCAACAAGGTAATGTCGCA 58.266 40.909 0.00 0.00 31.81 5.10
460 461 4.130857 TCTTCAACAAGGTAATGTCGCAA 58.869 39.130 0.00 0.00 31.81 4.85
461 462 4.576873 TCTTCAACAAGGTAATGTCGCAAA 59.423 37.500 0.00 0.00 31.81 3.68
462 463 5.240623 TCTTCAACAAGGTAATGTCGCAAAT 59.759 36.000 0.00 0.00 31.81 2.32
463 464 5.041951 TCAACAAGGTAATGTCGCAAATC 57.958 39.130 0.00 0.00 31.81 2.17
464 465 4.517075 TCAACAAGGTAATGTCGCAAATCA 59.483 37.500 0.00 0.00 31.81 2.57
465 466 5.182950 TCAACAAGGTAATGTCGCAAATCAT 59.817 36.000 0.00 0.00 31.81 2.45
466 467 5.235305 ACAAGGTAATGTCGCAAATCATC 57.765 39.130 0.00 0.00 0.00 2.92
467 468 4.201812 ACAAGGTAATGTCGCAAATCATCG 60.202 41.667 0.00 0.00 0.00 3.84
468 469 3.531538 AGGTAATGTCGCAAATCATCGT 58.468 40.909 0.00 0.00 0.00 3.73
469 470 3.938963 AGGTAATGTCGCAAATCATCGTT 59.061 39.130 0.00 0.00 0.00 3.85
470 471 4.028383 GGTAATGTCGCAAATCATCGTTG 58.972 43.478 0.00 0.00 0.00 4.10
471 472 3.829886 AATGTCGCAAATCATCGTTGT 57.170 38.095 0.00 0.00 0.00 3.32
472 473 3.829886 ATGTCGCAAATCATCGTTGTT 57.170 38.095 0.00 0.00 0.00 2.83
473 474 2.914861 TGTCGCAAATCATCGTTGTTG 58.085 42.857 0.00 0.00 0.00 3.33
474 475 1.643810 GTCGCAAATCATCGTTGTTGC 59.356 47.619 10.29 10.29 42.29 4.17
476 477 0.363178 GCAAATCATCGTTGTTGCGC 59.637 50.000 0.00 0.00 37.25 6.09
477 478 0.984109 CAAATCATCGTTGTTGCGCC 59.016 50.000 4.18 0.00 0.00 6.53
478 479 0.881118 AAATCATCGTTGTTGCGCCT 59.119 45.000 4.18 0.00 0.00 5.52
479 480 0.881118 AATCATCGTTGTTGCGCCTT 59.119 45.000 4.18 0.00 0.00 4.35
480 481 1.732941 ATCATCGTTGTTGCGCCTTA 58.267 45.000 4.18 0.00 0.00 2.69
481 482 0.793861 TCATCGTTGTTGCGCCTTAC 59.206 50.000 4.18 0.50 0.00 2.34
482 483 0.515127 CATCGTTGTTGCGCCTTACA 59.485 50.000 4.18 3.67 0.00 2.41
483 484 1.069568 CATCGTTGTTGCGCCTTACAA 60.070 47.619 4.18 10.36 32.21 2.41
484 485 0.584396 TCGTTGTTGCGCCTTACAAG 59.416 50.000 16.83 12.20 35.13 3.16
485 486 0.306533 CGTTGTTGCGCCTTACAAGT 59.693 50.000 16.83 0.00 35.13 3.16
486 487 1.527736 CGTTGTTGCGCCTTACAAGTA 59.472 47.619 16.83 0.00 35.13 2.24
487 488 2.411031 CGTTGTTGCGCCTTACAAGTAG 60.411 50.000 16.83 9.89 35.13 2.57
488 489 2.803956 GTTGTTGCGCCTTACAAGTAGA 59.196 45.455 16.83 0.00 35.13 2.59
489 490 3.114668 TGTTGCGCCTTACAAGTAGAA 57.885 42.857 4.18 0.00 0.00 2.10
490 491 3.064207 TGTTGCGCCTTACAAGTAGAAG 58.936 45.455 4.18 0.00 0.00 2.85
491 492 3.064931 GTTGCGCCTTACAAGTAGAAGT 58.935 45.455 4.18 0.00 0.00 3.01
492 493 2.955614 TGCGCCTTACAAGTAGAAGTC 58.044 47.619 4.18 0.00 0.00 3.01
493 494 2.561419 TGCGCCTTACAAGTAGAAGTCT 59.439 45.455 4.18 0.00 0.00 3.24
494 495 3.006537 TGCGCCTTACAAGTAGAAGTCTT 59.993 43.478 4.18 0.00 0.00 3.01
495 496 3.995048 GCGCCTTACAAGTAGAAGTCTTT 59.005 43.478 0.00 0.00 0.00 2.52
496 497 4.451435 GCGCCTTACAAGTAGAAGTCTTTT 59.549 41.667 0.00 0.00 0.00 2.27
497 498 5.049612 GCGCCTTACAAGTAGAAGTCTTTTT 60.050 40.000 0.00 0.00 0.00 1.94
514 515 3.367288 TTTTTCCGGGGCTTTAGGG 57.633 52.632 0.00 0.00 0.00 3.53
515 516 0.483770 TTTTTCCGGGGCTTTAGGGT 59.516 50.000 0.00 0.00 0.00 4.34
516 517 0.483770 TTTTCCGGGGCTTTAGGGTT 59.516 50.000 0.00 0.00 0.00 4.11
517 518 0.483770 TTTCCGGGGCTTTAGGGTTT 59.516 50.000 0.00 0.00 0.00 3.27
518 519 1.370434 TTCCGGGGCTTTAGGGTTTA 58.630 50.000 0.00 0.00 0.00 2.01
519 520 0.913924 TCCGGGGCTTTAGGGTTTAG 59.086 55.000 0.00 0.00 0.00 1.85
520 521 0.106868 CCGGGGCTTTAGGGTTTAGG 60.107 60.000 0.00 0.00 0.00 2.69
521 522 0.106868 CGGGGCTTTAGGGTTTAGGG 60.107 60.000 0.00 0.00 0.00 3.53
522 523 1.005228 GGGGCTTTAGGGTTTAGGGT 58.995 55.000 0.00 0.00 0.00 4.34
523 524 1.360162 GGGGCTTTAGGGTTTAGGGTT 59.640 52.381 0.00 0.00 0.00 4.11
524 525 2.225445 GGGGCTTTAGGGTTTAGGGTTT 60.225 50.000 0.00 0.00 0.00 3.27
525 526 3.011595 GGGGCTTTAGGGTTTAGGGTTTA 59.988 47.826 0.00 0.00 0.00 2.01
526 527 4.275810 GGGCTTTAGGGTTTAGGGTTTAG 58.724 47.826 0.00 0.00 0.00 1.85
527 528 4.275810 GGCTTTAGGGTTTAGGGTTTAGG 58.724 47.826 0.00 0.00 0.00 2.69
528 529 4.018141 GGCTTTAGGGTTTAGGGTTTAGGA 60.018 45.833 0.00 0.00 0.00 2.94
529 530 5.191426 GCTTTAGGGTTTAGGGTTTAGGAG 58.809 45.833 0.00 0.00 0.00 3.69
530 531 5.045359 GCTTTAGGGTTTAGGGTTTAGGAGA 60.045 44.000 0.00 0.00 0.00 3.71
531 532 6.522977 GCTTTAGGGTTTAGGGTTTAGGAGAA 60.523 42.308 0.00 0.00 0.00 2.87
532 533 6.631763 TTAGGGTTTAGGGTTTAGGAGAAG 57.368 41.667 0.00 0.00 0.00 2.85
533 534 4.771338 AGGGTTTAGGGTTTAGGAGAAGA 58.229 43.478 0.00 0.00 0.00 2.87
534 535 4.783763 AGGGTTTAGGGTTTAGGAGAAGAG 59.216 45.833 0.00 0.00 0.00 2.85
535 536 4.535294 GGGTTTAGGGTTTAGGAGAAGAGT 59.465 45.833 0.00 0.00 0.00 3.24
536 537 5.013913 GGGTTTAGGGTTTAGGAGAAGAGTT 59.986 44.000 0.00 0.00 0.00 3.01
537 538 6.466904 GGGTTTAGGGTTTAGGAGAAGAGTTT 60.467 42.308 0.00 0.00 0.00 2.66
538 539 7.002879 GGTTTAGGGTTTAGGAGAAGAGTTTT 58.997 38.462 0.00 0.00 0.00 2.43
539 540 7.174599 GGTTTAGGGTTTAGGAGAAGAGTTTTC 59.825 40.741 0.00 0.00 0.00 2.29
540 541 5.906772 AGGGTTTAGGAGAAGAGTTTTCA 57.093 39.130 0.00 0.00 0.00 2.69
541 542 6.455690 AGGGTTTAGGAGAAGAGTTTTCAT 57.544 37.500 0.00 0.00 0.00 2.57
542 543 6.477253 AGGGTTTAGGAGAAGAGTTTTCATC 58.523 40.000 0.00 0.00 0.00 2.92
543 544 6.044404 AGGGTTTAGGAGAAGAGTTTTCATCA 59.956 38.462 0.00 0.00 0.00 3.07
544 545 6.149640 GGGTTTAGGAGAAGAGTTTTCATCAC 59.850 42.308 0.00 0.00 0.00 3.06
545 546 6.710744 GGTTTAGGAGAAGAGTTTTCATCACA 59.289 38.462 0.00 0.00 0.00 3.58
546 547 7.228706 GGTTTAGGAGAAGAGTTTTCATCACAA 59.771 37.037 0.00 0.00 0.00 3.33
547 548 8.621286 GTTTAGGAGAAGAGTTTTCATCACAAA 58.379 33.333 0.00 0.00 0.00 2.83
548 549 6.625873 AGGAGAAGAGTTTTCATCACAAAC 57.374 37.500 0.00 0.00 34.80 2.93
549 550 6.122277 AGGAGAAGAGTTTTCATCACAAACA 58.878 36.000 0.00 0.00 36.71 2.83
550 551 6.774656 AGGAGAAGAGTTTTCATCACAAACAT 59.225 34.615 0.00 0.00 36.71 2.71
551 552 7.939039 AGGAGAAGAGTTTTCATCACAAACATA 59.061 33.333 0.00 0.00 36.71 2.29
552 553 8.567948 GGAGAAGAGTTTTCATCACAAACATAA 58.432 33.333 0.00 0.00 36.71 1.90
582 583 8.516811 AGTTTCATATTCCGACGTGTATTATC 57.483 34.615 0.00 0.00 0.00 1.75
594 595 6.128607 CGACGTGTATTATCGAGGTATCTCTT 60.129 42.308 0.62 0.00 38.10 2.85
666 668 8.027189 TGAAAAAGCATGAGATCTTTTGAGATG 58.973 33.333 8.84 0.00 40.44 2.90
677 679 0.790207 TTTGAGATGCGAGCGTTGAC 59.210 50.000 0.00 0.00 0.00 3.18
704 706 0.240945 CAAAGGTAAGCCAAGCACCG 59.759 55.000 0.00 0.00 37.42 4.94
711 713 1.768684 AAGCCAAGCACCGGAGAGAA 61.769 55.000 9.46 0.00 0.00 2.87
812 814 1.597027 AACGGCCGGAAGTTCACAG 60.597 57.895 31.76 0.00 0.00 3.66
832 834 4.999950 ACAGCAATATATAAGCAGGACAGC 59.000 41.667 11.36 0.00 0.00 4.40
859 861 3.481453 AGCCAAGAAAGAAGAGAACACC 58.519 45.455 0.00 0.00 0.00 4.16
896 898 7.310113 GGGAGAGAGGTTTCAGGTACATATATG 60.310 44.444 11.29 11.29 0.00 1.78
897 899 6.998802 AGAGAGGTTTCAGGTACATATATGC 58.001 40.000 12.79 0.00 0.00 3.14
923 927 3.623510 GGCCAGAAATTCTACTTTCTCCG 59.376 47.826 0.00 0.00 42.21 4.63
924 928 3.623510 GCCAGAAATTCTACTTTCTCCGG 59.376 47.826 0.00 0.00 42.21 5.14
925 929 4.833390 CCAGAAATTCTACTTTCTCCGGT 58.167 43.478 0.00 0.00 42.21 5.28
926 930 4.631813 CCAGAAATTCTACTTTCTCCGGTG 59.368 45.833 0.00 0.00 42.21 4.94
932 955 4.884668 TCTACTTTCTCCGGTGTTCATT 57.115 40.909 0.00 0.00 0.00 2.57
948 971 0.110509 CATTACCGATCTGCATGCGC 60.111 55.000 14.09 0.00 39.24 6.09
949 972 0.250038 ATTACCGATCTGCATGCGCT 60.250 50.000 14.09 0.00 39.64 5.92
951 974 0.875908 TACCGATCTGCATGCGCTTC 60.876 55.000 14.09 8.26 39.64 3.86
980 1003 3.254166 TGATCAAAGGTCAAAGCTCTTGC 59.746 43.478 0.00 0.00 40.05 4.01
1190 1216 3.385577 GAGCTAGCTTACATGTACCAGC 58.614 50.000 20.42 18.07 0.00 4.85
1245 1277 4.288670 ACTACACGTCGTTCTATCCATG 57.711 45.455 0.00 0.00 0.00 3.66
1375 1408 1.002544 GCTAGCACCCACAACTTCTCT 59.997 52.381 10.63 0.00 0.00 3.10
1477 1516 2.787249 GCGCATGAGCACGTCATT 59.213 55.556 17.16 0.00 44.05 2.57
1480 1519 1.503091 GCATGAGCACGTCATTGCA 59.497 52.632 0.00 0.00 44.05 4.08
1542 1581 3.070576 GGCCACCATTGTCCCAGC 61.071 66.667 0.00 0.00 0.00 4.85
1543 1582 2.036256 GCCACCATTGTCCCAGCT 59.964 61.111 0.00 0.00 0.00 4.24
1597 1647 5.978934 TTAGTTCGTTTCTGAGGTCAAAC 57.021 39.130 0.00 0.00 0.00 2.93
1747 2074 8.893219 TCGATCAAAGTTATATGAAGCTTGAT 57.107 30.769 2.10 2.79 0.00 2.57
1748 2075 8.768019 TCGATCAAAGTTATATGAAGCTTGATG 58.232 33.333 2.10 0.00 0.00 3.07
1804 2131 6.038271 GTGGAAGTATGTGACAAGACAACTTT 59.962 38.462 0.00 0.00 32.33 2.66
2206 6152 4.798387 GCAAATCCGGTTATAACTTGCAAG 59.202 41.667 24.84 24.84 36.03 4.01
2241 6193 5.061853 CGGTGGCTAGTCTACTACTAATGA 58.938 45.833 0.00 0.00 40.21 2.57
2284 6238 1.392853 CACTTCTGTGCAGATCGAAGC 59.607 52.381 11.41 0.00 37.08 3.86
2407 6363 5.105853 TGATTAGACCTTCCCCCTTTTACT 58.894 41.667 0.00 0.00 0.00 2.24
2420 6377 3.253432 CCCTTTTACTTTCTGAGTGTGGC 59.747 47.826 0.00 0.00 39.48 5.01
2444 6401 5.453339 CCGTGGTATCCATTTCTATGAGTGT 60.453 44.000 0.00 0.00 35.28 3.55
2445 6402 6.049149 CGTGGTATCCATTTCTATGAGTGTT 58.951 40.000 0.00 0.00 35.28 3.32
2446 6403 6.018751 CGTGGTATCCATTTCTATGAGTGTTG 60.019 42.308 0.00 0.00 35.28 3.33
2447 6404 6.823689 GTGGTATCCATTTCTATGAGTGTTGT 59.176 38.462 0.00 0.00 35.28 3.32
2448 6405 7.011482 GTGGTATCCATTTCTATGAGTGTTGTC 59.989 40.741 0.00 0.00 35.28 3.18
2449 6406 7.092891 TGGTATCCATTTCTATGAGTGTTGTCT 60.093 37.037 0.00 0.00 33.37 3.41
2450 6407 7.225538 GGTATCCATTTCTATGAGTGTTGTCTG 59.774 40.741 0.00 0.00 33.37 3.51
2469 6426 4.026804 GTCTGTTGTGTGAACTCTGTAACG 60.027 45.833 0.00 0.00 0.00 3.18
2497 6454 2.557056 GTTTACCTTTCCTGAGCAACCC 59.443 50.000 0.00 0.00 0.00 4.11
2637 6595 2.171237 TGTATGAATCACTGCAGGGGAG 59.829 50.000 17.80 3.66 0.00 4.30
2652 6617 1.023513 GGGAGATGCTGAGTGTGTGC 61.024 60.000 0.00 0.00 0.00 4.57
2700 6666 2.838202 ACTCACCGAATGACCACCTAAT 59.162 45.455 0.00 0.00 32.37 1.73
2701 6667 3.263425 ACTCACCGAATGACCACCTAATT 59.737 43.478 0.00 0.00 32.37 1.40
2702 6668 4.468510 ACTCACCGAATGACCACCTAATTA 59.531 41.667 0.00 0.00 32.37 1.40
2703 6669 5.046159 ACTCACCGAATGACCACCTAATTAA 60.046 40.000 0.00 0.00 32.37 1.40
2707 6673 4.944930 CCGAATGACCACCTAATTAAACCA 59.055 41.667 0.00 0.00 0.00 3.67
2715 6681 5.047377 ACCACCTAATTAAACCAAGTGCATG 60.047 40.000 0.00 0.00 0.00 4.06
2769 8515 4.319249 GCAAAGCCACGTTTGACC 57.681 55.556 1.93 0.00 39.40 4.02
2821 8568 4.338539 GACACGTGTCCGCCGTCT 62.339 66.667 33.62 3.05 39.07 4.18
2836 10384 1.069090 GTCTGCGTGGTTGACAGGA 59.931 57.895 0.00 0.00 37.13 3.86
2837 10385 0.946221 GTCTGCGTGGTTGACAGGAG 60.946 60.000 0.00 0.00 37.13 3.69
2841 10389 1.823169 GCGTGGTTGACAGGAGGGTA 61.823 60.000 0.00 0.00 37.13 3.69
2845 10393 0.613777 GGTTGACAGGAGGGTAGTGG 59.386 60.000 0.00 0.00 0.00 4.00
2847 10395 1.002087 GTTGACAGGAGGGTAGTGGTG 59.998 57.143 0.00 0.00 0.00 4.17
2849 10397 1.152118 ACAGGAGGGTAGTGGTGCA 60.152 57.895 0.00 0.00 0.00 4.57
2851 10399 1.158705 AGGAGGGTAGTGGTGCAGT 59.841 57.895 0.00 0.00 0.00 4.40
2852 10400 0.905337 AGGAGGGTAGTGGTGCAGTC 60.905 60.000 0.00 0.00 0.00 3.51
2854 10402 0.037232 GAGGGTAGTGGTGCAGTCAC 60.037 60.000 11.06 11.06 42.40 3.67
2863 10411 2.706636 GTGCAGTCACCTTTGCTGA 58.293 52.632 0.00 0.00 40.87 4.26
2865 10413 0.181114 TGCAGTCACCTTTGCTGAGT 59.819 50.000 0.00 0.00 40.87 3.41
2866 10414 1.416030 TGCAGTCACCTTTGCTGAGTA 59.584 47.619 0.00 0.00 40.87 2.59
2878 10426 2.202295 GCTGAGTAGCCGAGAAAGAG 57.798 55.000 0.00 0.00 44.33 2.85
2879 10427 1.801025 GCTGAGTAGCCGAGAAAGAGC 60.801 57.143 0.00 0.00 44.33 4.09
2882 10430 1.474879 GAGTAGCCGAGAAAGAGCACT 59.525 52.381 0.00 0.00 0.00 4.40
2883 10431 1.474879 AGTAGCCGAGAAAGAGCACTC 59.525 52.381 0.00 0.00 0.00 3.51
2892 10440 4.749976 GAGAAAGAGCACTCGGTAAATCT 58.250 43.478 0.00 0.00 34.09 2.40
2893 10441 5.153950 AGAAAGAGCACTCGGTAAATCTT 57.846 39.130 0.00 0.00 34.09 2.40
2894 10442 5.552178 AGAAAGAGCACTCGGTAAATCTTT 58.448 37.500 0.00 0.00 39.12 2.52
2895 10443 5.998363 AGAAAGAGCACTCGGTAAATCTTTT 59.002 36.000 0.00 0.00 37.18 2.27
2896 10444 6.486993 AGAAAGAGCACTCGGTAAATCTTTTT 59.513 34.615 0.00 0.00 37.18 1.94
2920 10468 9.665719 TTTTTCTTTCTGTCCTTTATTTGCTTT 57.334 25.926 0.00 0.00 0.00 3.51
2921 10469 8.871686 TTTCTTTCTGTCCTTTATTTGCTTTC 57.128 30.769 0.00 0.00 0.00 2.62
2922 10470 7.823745 TCTTTCTGTCCTTTATTTGCTTTCT 57.176 32.000 0.00 0.00 0.00 2.52
2923 10471 8.237811 TCTTTCTGTCCTTTATTTGCTTTCTT 57.762 30.769 0.00 0.00 0.00 2.52
2924 10472 8.352942 TCTTTCTGTCCTTTATTTGCTTTCTTC 58.647 33.333 0.00 0.00 0.00 2.87
2925 10473 7.823745 TTCTGTCCTTTATTTGCTTTCTTCT 57.176 32.000 0.00 0.00 0.00 2.85
2927 10475 7.227156 TCTGTCCTTTATTTGCTTTCTTCTCT 58.773 34.615 0.00 0.00 0.00 3.10
2928 10476 7.721399 TCTGTCCTTTATTTGCTTTCTTCTCTT 59.279 33.333 0.00 0.00 0.00 2.85
2930 10478 7.721399 TGTCCTTTATTTGCTTTCTTCTCTTCT 59.279 33.333 0.00 0.00 0.00 2.85
2932 10480 8.160106 TCCTTTATTTGCTTTCTTCTCTTCTCT 58.840 33.333 0.00 0.00 0.00 3.10
2940 10488 8.133024 TGCTTTCTTCTCTTCTCTTATCTTCT 57.867 34.615 0.00 0.00 0.00 2.85
2941 10489 8.592809 TGCTTTCTTCTCTTCTCTTATCTTCTT 58.407 33.333 0.00 0.00 0.00 2.52
2942 10490 9.435688 GCTTTCTTCTCTTCTCTTATCTTCTTT 57.564 33.333 0.00 0.00 0.00 2.52
2975 10523 7.064060 TCTTTATTACCGAAAAAGGCTTACG 57.936 36.000 0.00 7.27 32.33 3.18
2986 10534 4.136250 GCTTACGCCCCGCTTTAT 57.864 55.556 0.00 0.00 0.00 1.40
2987 10535 3.294079 GCTTACGCCCCGCTTTATA 57.706 52.632 0.00 0.00 0.00 0.98
2988 10536 1.585297 GCTTACGCCCCGCTTTATAA 58.415 50.000 0.00 0.00 0.00 0.98
2989 10537 1.941975 GCTTACGCCCCGCTTTATAAA 59.058 47.619 0.00 0.00 0.00 1.40
2990 10538 2.551032 GCTTACGCCCCGCTTTATAAAT 59.449 45.455 0.00 0.00 0.00 1.40
2991 10539 3.747529 GCTTACGCCCCGCTTTATAAATA 59.252 43.478 0.00 0.00 0.00 1.40
2993 10541 5.277925 GCTTACGCCCCGCTTTATAAATAAA 60.278 40.000 0.00 0.00 0.00 1.40
3004 10552 6.806120 CTTTATAAATAAAGCAACCGCCAC 57.194 37.500 9.01 0.00 41.69 5.01
3005 10553 5.899120 TTATAAATAAAGCAACCGCCACA 57.101 34.783 0.00 0.00 39.83 4.17
3007 10555 1.904287 AATAAAGCAACCGCCACAGA 58.096 45.000 0.00 0.00 39.83 3.41
3008 10556 1.453155 ATAAAGCAACCGCCACAGAG 58.547 50.000 0.00 0.00 39.83 3.35
3009 10557 1.234615 TAAAGCAACCGCCACAGAGC 61.235 55.000 0.00 0.00 39.83 4.09
3012 10560 1.745115 GCAACCGCCACAGAGCATA 60.745 57.895 0.00 0.00 0.00 3.14
3013 10561 1.982073 GCAACCGCCACAGAGCATAC 61.982 60.000 0.00 0.00 0.00 2.39
3014 10562 0.673333 CAACCGCCACAGAGCATACA 60.673 55.000 0.00 0.00 0.00 2.29
3015 10563 0.253044 AACCGCCACAGAGCATACAT 59.747 50.000 0.00 0.00 0.00 2.29
3016 10564 1.119684 ACCGCCACAGAGCATACATA 58.880 50.000 0.00 0.00 0.00 2.29
3017 10565 1.202533 ACCGCCACAGAGCATACATAC 60.203 52.381 0.00 0.00 0.00 2.39
3018 10566 1.502231 CGCCACAGAGCATACATACC 58.498 55.000 0.00 0.00 0.00 2.73
3019 10567 1.202521 CGCCACAGAGCATACATACCA 60.203 52.381 0.00 0.00 0.00 3.25
3020 10568 2.213499 GCCACAGAGCATACATACCAC 58.787 52.381 0.00 0.00 0.00 4.16
3021 10569 2.419990 GCCACAGAGCATACATACCACA 60.420 50.000 0.00 0.00 0.00 4.17
3023 10571 4.503123 GCCACAGAGCATACATACCACATA 60.503 45.833 0.00 0.00 0.00 2.29
3024 10572 5.233225 CCACAGAGCATACATACCACATAG 58.767 45.833 0.00 0.00 0.00 2.23
3025 10573 5.233225 CACAGAGCATACATACCACATAGG 58.767 45.833 0.00 0.00 45.67 2.57
3036 10584 1.821216 CCACATAGGTCCACACCAAC 58.179 55.000 0.00 0.00 46.68 3.77
3037 10585 1.073125 CCACATAGGTCCACACCAACA 59.927 52.381 0.00 0.00 46.68 3.33
3038 10586 2.151202 CACATAGGTCCACACCAACAC 58.849 52.381 0.00 0.00 46.68 3.32
3039 10587 1.771854 ACATAGGTCCACACCAACACA 59.228 47.619 0.00 0.00 46.68 3.72
3041 10589 1.205055 TAGGTCCACACCAACACACA 58.795 50.000 0.00 0.00 46.68 3.72
3042 10590 0.393808 AGGTCCACACCAACACACAC 60.394 55.000 0.00 0.00 46.68 3.82
3047 11397 0.650512 CACACCAACACACACGAGTC 59.349 55.000 0.00 0.00 0.00 3.36
3055 11405 1.754803 ACACACACGAGTCTCAGGAAA 59.245 47.619 0.00 0.00 0.00 3.13
3058 11408 2.431057 ACACACGAGTCTCAGGAAAAGT 59.569 45.455 0.00 0.00 0.00 2.66
3060 11410 3.982058 CACACGAGTCTCAGGAAAAGTAC 59.018 47.826 0.00 0.00 0.00 2.73
3061 11411 3.635373 ACACGAGTCTCAGGAAAAGTACA 59.365 43.478 0.00 0.00 0.00 2.90
3062 11412 4.098960 ACACGAGTCTCAGGAAAAGTACAA 59.901 41.667 0.00 0.00 0.00 2.41
3063 11413 5.047847 CACGAGTCTCAGGAAAAGTACAAA 58.952 41.667 0.00 0.00 0.00 2.83
3065 11415 4.686554 CGAGTCTCAGGAAAAGTACAAAGG 59.313 45.833 0.00 0.00 0.00 3.11
3067 11417 6.002653 AGTCTCAGGAAAAGTACAAAGGTT 57.997 37.500 0.00 0.00 0.00 3.50
3068 11418 6.056236 AGTCTCAGGAAAAGTACAAAGGTTC 58.944 40.000 0.00 0.00 0.00 3.62
3069 11419 6.056236 GTCTCAGGAAAAGTACAAAGGTTCT 58.944 40.000 0.00 0.00 0.00 3.01
3070 11420 6.017852 GTCTCAGGAAAAGTACAAAGGTTCTG 60.018 42.308 0.00 0.00 0.00 3.02
3073 11423 4.580580 AGGAAAAGTACAAAGGTTCTGCTG 59.419 41.667 0.00 0.00 0.00 4.41
3088 11438 3.978272 CTGAGGGCACAGCTCAAC 58.022 61.111 0.00 0.00 0.00 3.18
3089 11439 1.071987 CTGAGGGCACAGCTCAACA 59.928 57.895 0.00 0.00 0.00 3.33
3090 11440 0.535780 CTGAGGGCACAGCTCAACAA 60.536 55.000 0.00 0.00 0.00 2.83
3091 11441 0.535780 TGAGGGCACAGCTCAACAAG 60.536 55.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.668090 GCAGTATCGTTGCAACATTTTCATTG 60.668 38.462 28.01 15.50 41.17 2.82
2 3 5.345741 GCAGTATCGTTGCAACATTTTCATT 59.654 36.000 28.01 6.60 41.17 2.57
5 6 4.806056 GCAGTATCGTTGCAACATTTTC 57.194 40.909 28.01 13.91 41.17 2.29
14 15 1.606606 GTTGCTTGCAGTATCGTTGC 58.393 50.000 0.00 0.00 41.86 4.17
15 16 1.459209 TCGTTGCTTGCAGTATCGTTG 59.541 47.619 0.00 0.00 0.00 4.10
16 17 1.459592 GTCGTTGCTTGCAGTATCGTT 59.540 47.619 0.00 0.00 0.00 3.85
17 18 1.068474 GTCGTTGCTTGCAGTATCGT 58.932 50.000 0.00 0.00 0.00 3.73
18 19 1.067693 TGTCGTTGCTTGCAGTATCG 58.932 50.000 0.00 1.24 0.00 2.92
19 20 2.223144 TGTTGTCGTTGCTTGCAGTATC 59.777 45.455 0.00 0.00 0.00 2.24
20 21 2.217750 TGTTGTCGTTGCTTGCAGTAT 58.782 42.857 0.00 0.00 0.00 2.12
21 22 1.657822 TGTTGTCGTTGCTTGCAGTA 58.342 45.000 0.00 0.00 0.00 2.74
22 23 1.024271 ATGTTGTCGTTGCTTGCAGT 58.976 45.000 0.00 0.00 0.00 4.40
23 24 2.967459 TATGTTGTCGTTGCTTGCAG 57.033 45.000 0.00 0.00 0.00 4.41
24 25 2.551887 ACATATGTTGTCGTTGCTTGCA 59.448 40.909 1.41 0.00 30.89 4.08
25 26 3.201726 ACATATGTTGTCGTTGCTTGC 57.798 42.857 1.41 0.00 30.89 4.01
26 27 5.684850 TGTTACATATGTTGTCGTTGCTTG 58.315 37.500 14.77 0.00 39.87 4.01
27 28 5.933187 TGTTACATATGTTGTCGTTGCTT 57.067 34.783 14.77 0.00 39.87 3.91
28 29 5.334569 GGTTGTTACATATGTTGTCGTTGCT 60.335 40.000 14.77 0.00 39.87 3.91
29 30 4.849383 GGTTGTTACATATGTTGTCGTTGC 59.151 41.667 14.77 0.00 39.87 4.17
30 31 5.076765 CGGTTGTTACATATGTTGTCGTTG 58.923 41.667 14.77 0.00 39.87 4.10
31 32 4.751098 ACGGTTGTTACATATGTTGTCGTT 59.249 37.500 14.77 0.00 39.87 3.85
32 33 4.309099 ACGGTTGTTACATATGTTGTCGT 58.691 39.130 14.77 12.31 39.87 4.34
33 34 4.914312 ACGGTTGTTACATATGTTGTCG 57.086 40.909 14.77 11.73 39.87 4.35
34 35 6.304126 CAGAACGGTTGTTACATATGTTGTC 58.696 40.000 14.77 5.76 38.78 3.18
35 36 5.180492 CCAGAACGGTTGTTACATATGTTGT 59.820 40.000 14.77 0.00 38.78 3.32
36 37 5.627172 CCAGAACGGTTGTTACATATGTTG 58.373 41.667 14.77 1.28 38.78 3.33
37 38 5.873179 CCAGAACGGTTGTTACATATGTT 57.127 39.130 14.77 0.00 38.78 2.71
51 52 5.151389 GTTGTAGCATTTTTACCAGAACGG 58.849 41.667 0.00 0.00 42.50 4.44
52 53 5.151389 GGTTGTAGCATTTTTACCAGAACG 58.849 41.667 0.00 0.00 0.00 3.95
53 54 5.151389 CGGTTGTAGCATTTTTACCAGAAC 58.849 41.667 0.00 0.00 0.00 3.01
54 55 4.822896 ACGGTTGTAGCATTTTTACCAGAA 59.177 37.500 0.00 0.00 0.00 3.02
55 56 4.391155 ACGGTTGTAGCATTTTTACCAGA 58.609 39.130 0.00 0.00 0.00 3.86
56 57 4.214545 TGACGGTTGTAGCATTTTTACCAG 59.785 41.667 0.00 0.00 0.00 4.00
57 58 4.135306 TGACGGTTGTAGCATTTTTACCA 58.865 39.130 0.00 0.00 0.00 3.25
58 59 4.752661 TGACGGTTGTAGCATTTTTACC 57.247 40.909 0.00 0.00 0.00 2.85
59 60 6.432107 TCTTTGACGGTTGTAGCATTTTTAC 58.568 36.000 0.00 0.00 0.00 2.01
60 61 6.621316 TCTTTGACGGTTGTAGCATTTTTA 57.379 33.333 0.00 0.00 0.00 1.52
61 62 5.508200 TCTTTGACGGTTGTAGCATTTTT 57.492 34.783 0.00 0.00 0.00 1.94
62 63 5.298276 TCTTCTTTGACGGTTGTAGCATTTT 59.702 36.000 0.00 0.00 0.00 1.82
63 64 4.819630 TCTTCTTTGACGGTTGTAGCATTT 59.180 37.500 0.00 0.00 0.00 2.32
64 65 4.385825 TCTTCTTTGACGGTTGTAGCATT 58.614 39.130 0.00 0.00 0.00 3.56
65 66 4.002906 TCTTCTTTGACGGTTGTAGCAT 57.997 40.909 0.00 0.00 0.00 3.79
66 67 3.462483 TCTTCTTTGACGGTTGTAGCA 57.538 42.857 0.00 0.00 0.00 3.49
67 68 3.186613 CCTTCTTCTTTGACGGTTGTAGC 59.813 47.826 0.00 0.00 0.00 3.58
68 69 4.377897 ACCTTCTTCTTTGACGGTTGTAG 58.622 43.478 0.00 0.00 35.43 2.74
69 70 4.411256 ACCTTCTTCTTTGACGGTTGTA 57.589 40.909 0.00 0.00 35.43 2.41
70 71 3.277142 ACCTTCTTCTTTGACGGTTGT 57.723 42.857 0.00 0.00 35.43 3.32
72 73 2.357952 GCAACCTTCTTCTTTGACGGTT 59.642 45.455 0.00 0.00 45.52 4.44
73 74 1.947456 GCAACCTTCTTCTTTGACGGT 59.053 47.619 0.00 0.00 39.80 4.83
74 75 1.946768 TGCAACCTTCTTCTTTGACGG 59.053 47.619 0.00 0.00 0.00 4.79
75 76 3.363178 GTTGCAACCTTCTTCTTTGACG 58.637 45.455 19.15 0.00 0.00 4.35
76 77 3.706698 GGTTGCAACCTTCTTCTTTGAC 58.293 45.455 36.26 9.38 45.75 3.18
88 89 0.605319 TCATCTCACCGGTTGCAACC 60.605 55.000 34.48 34.48 45.76 3.77
89 90 1.131126 CATCATCTCACCGGTTGCAAC 59.869 52.381 21.59 21.59 0.00 4.17
90 91 1.271325 ACATCATCTCACCGGTTGCAA 60.271 47.619 2.97 0.00 0.00 4.08
91 92 0.324614 ACATCATCTCACCGGTTGCA 59.675 50.000 2.97 0.00 0.00 4.08
92 93 0.729116 CACATCATCTCACCGGTTGC 59.271 55.000 2.97 0.00 0.00 4.17
93 94 0.729116 GCACATCATCTCACCGGTTG 59.271 55.000 2.97 0.00 0.00 3.77
94 95 0.615331 AGCACATCATCTCACCGGTT 59.385 50.000 2.97 0.00 0.00 4.44
95 96 0.107993 CAGCACATCATCTCACCGGT 60.108 55.000 0.00 0.00 0.00 5.28
96 97 1.434622 GCAGCACATCATCTCACCGG 61.435 60.000 0.00 0.00 0.00 5.28
97 98 0.741927 TGCAGCACATCATCTCACCG 60.742 55.000 0.00 0.00 0.00 4.94
98 99 1.456296 TTGCAGCACATCATCTCACC 58.544 50.000 0.00 0.00 0.00 4.02
99 100 2.286242 CGATTGCAGCACATCATCTCAC 60.286 50.000 0.00 0.00 0.00 3.51
100 101 1.937899 CGATTGCAGCACATCATCTCA 59.062 47.619 0.00 0.00 0.00 3.27
101 102 2.207590 TCGATTGCAGCACATCATCTC 58.792 47.619 0.00 0.00 0.00 2.75
102 103 2.320745 TCGATTGCAGCACATCATCT 57.679 45.000 0.00 0.00 0.00 2.90
103 104 2.546789 TCATCGATTGCAGCACATCATC 59.453 45.455 0.00 0.00 0.00 2.92
104 105 2.548480 CTCATCGATTGCAGCACATCAT 59.452 45.455 0.00 0.00 0.00 2.45
105 106 1.937899 CTCATCGATTGCAGCACATCA 59.062 47.619 0.00 0.00 0.00 3.07
106 107 1.263484 CCTCATCGATTGCAGCACATC 59.737 52.381 0.00 1.00 0.00 3.06
107 108 1.134310 TCCTCATCGATTGCAGCACAT 60.134 47.619 0.00 0.00 0.00 3.21
108 109 0.249955 TCCTCATCGATTGCAGCACA 59.750 50.000 0.00 0.00 0.00 4.57
109 110 1.063174 GTTCCTCATCGATTGCAGCAC 59.937 52.381 0.00 0.00 0.00 4.40
110 111 1.372582 GTTCCTCATCGATTGCAGCA 58.627 50.000 0.00 0.00 0.00 4.41
111 112 0.302890 CGTTCCTCATCGATTGCAGC 59.697 55.000 0.00 0.00 0.00 5.25
112 113 0.302890 GCGTTCCTCATCGATTGCAG 59.697 55.000 0.00 0.00 0.00 4.41
113 114 1.089481 GGCGTTCCTCATCGATTGCA 61.089 55.000 0.00 0.00 0.00 4.08
114 115 1.089481 TGGCGTTCCTCATCGATTGC 61.089 55.000 0.00 0.00 0.00 3.56
115 116 1.262417 CATGGCGTTCCTCATCGATTG 59.738 52.381 0.00 0.00 0.00 2.67
116 117 1.586422 CATGGCGTTCCTCATCGATT 58.414 50.000 0.00 0.00 0.00 3.34
117 118 0.882042 GCATGGCGTTCCTCATCGAT 60.882 55.000 0.00 0.00 0.00 3.59
118 119 1.521457 GCATGGCGTTCCTCATCGA 60.521 57.895 0.00 0.00 0.00 3.59
119 120 0.249447 TAGCATGGCGTTCCTCATCG 60.249 55.000 0.00 0.00 0.00 3.84
120 121 1.221414 GTAGCATGGCGTTCCTCATC 58.779 55.000 0.00 0.00 0.00 2.92
121 122 0.541392 TGTAGCATGGCGTTCCTCAT 59.459 50.000 0.00 0.00 0.00 2.90
122 123 0.323302 TTGTAGCATGGCGTTCCTCA 59.677 50.000 0.00 0.00 0.00 3.86
123 124 0.727398 GTTGTAGCATGGCGTTCCTC 59.273 55.000 0.00 0.00 0.00 3.71
124 125 0.676782 GGTTGTAGCATGGCGTTCCT 60.677 55.000 0.00 0.00 0.00 3.36
125 126 0.958382 TGGTTGTAGCATGGCGTTCC 60.958 55.000 0.00 0.00 0.00 3.62
126 127 0.447801 CTGGTTGTAGCATGGCGTTC 59.552 55.000 0.00 0.00 0.00 3.95
127 128 0.250727 ACTGGTTGTAGCATGGCGTT 60.251 50.000 0.00 0.00 0.00 4.84
128 129 0.611200 TACTGGTTGTAGCATGGCGT 59.389 50.000 0.00 0.00 0.00 5.68
129 130 1.665679 CTTACTGGTTGTAGCATGGCG 59.334 52.381 0.00 0.00 32.08 5.69
130 131 2.985896 TCTTACTGGTTGTAGCATGGC 58.014 47.619 0.00 0.00 32.08 4.40
131 132 3.879295 CCATCTTACTGGTTGTAGCATGG 59.121 47.826 0.00 0.00 36.59 3.66
132 133 4.769688 TCCATCTTACTGGTTGTAGCATG 58.230 43.478 0.00 0.00 37.57 4.06
133 134 5.104360 ACATCCATCTTACTGGTTGTAGCAT 60.104 40.000 5.28 0.00 43.92 3.79
134 135 4.225042 ACATCCATCTTACTGGTTGTAGCA 59.775 41.667 5.28 0.00 43.92 3.49
135 136 4.770795 ACATCCATCTTACTGGTTGTAGC 58.229 43.478 5.28 0.00 43.92 3.58
136 137 5.065218 GCAACATCCATCTTACTGGTTGTAG 59.935 44.000 7.12 0.00 44.61 2.74
137 138 4.941263 GCAACATCCATCTTACTGGTTGTA 59.059 41.667 7.12 0.00 44.61 2.41
138 139 3.758554 GCAACATCCATCTTACTGGTTGT 59.241 43.478 0.00 1.85 46.37 3.32
139 140 3.758023 TGCAACATCCATCTTACTGGTTG 59.242 43.478 0.00 0.00 40.40 3.77
140 141 4.032960 TGCAACATCCATCTTACTGGTT 57.967 40.909 0.00 0.00 37.57 3.67
141 142 3.719268 TGCAACATCCATCTTACTGGT 57.281 42.857 0.00 0.00 37.57 4.00
142 143 3.129287 GGTTGCAACATCCATCTTACTGG 59.871 47.826 29.55 0.00 37.66 4.00
143 144 3.181507 CGGTTGCAACATCCATCTTACTG 60.182 47.826 29.55 1.45 0.00 2.74
144 145 3.009723 CGGTTGCAACATCCATCTTACT 58.990 45.455 29.55 0.00 0.00 2.24
145 146 2.097466 CCGGTTGCAACATCCATCTTAC 59.903 50.000 29.55 8.33 0.00 2.34
146 147 2.364632 CCGGTTGCAACATCCATCTTA 58.635 47.619 29.55 0.00 0.00 2.10
147 148 1.176527 CCGGTTGCAACATCCATCTT 58.823 50.000 29.55 0.00 0.00 2.40
148 149 1.315257 GCCGGTTGCAACATCCATCT 61.315 55.000 29.55 0.00 40.77 2.90
149 150 1.139520 GCCGGTTGCAACATCCATC 59.860 57.895 29.55 11.15 40.77 3.51
150 151 3.287445 GCCGGTTGCAACATCCAT 58.713 55.556 29.55 0.00 40.77 3.41
172 173 5.777802 TGTTCCATCGTATGCAACATTTTT 58.222 33.333 0.00 0.00 0.00 1.94
173 174 5.182950 TCTGTTCCATCGTATGCAACATTTT 59.817 36.000 0.00 0.00 0.00 1.82
174 175 4.699735 TCTGTTCCATCGTATGCAACATTT 59.300 37.500 0.00 0.00 0.00 2.32
175 176 4.260985 TCTGTTCCATCGTATGCAACATT 58.739 39.130 0.00 0.00 0.00 2.71
176 177 3.872696 TCTGTTCCATCGTATGCAACAT 58.127 40.909 0.00 0.00 0.00 2.71
177 178 3.326836 TCTGTTCCATCGTATGCAACA 57.673 42.857 0.00 4.87 0.00 3.33
178 179 4.591202 CATTCTGTTCCATCGTATGCAAC 58.409 43.478 0.00 0.00 0.00 4.17
179 180 3.065233 GCATTCTGTTCCATCGTATGCAA 59.935 43.478 0.00 0.00 37.45 4.08
180 181 2.613595 GCATTCTGTTCCATCGTATGCA 59.386 45.455 0.00 0.00 37.45 3.96
181 182 2.874701 AGCATTCTGTTCCATCGTATGC 59.125 45.455 0.00 0.00 37.70 3.14
182 183 3.303593 GCAGCATTCTGTTCCATCGTATG 60.304 47.826 0.00 0.00 42.29 2.39
183 184 2.874701 GCAGCATTCTGTTCCATCGTAT 59.125 45.455 0.00 0.00 42.29 3.06
184 185 2.279741 GCAGCATTCTGTTCCATCGTA 58.720 47.619 0.00 0.00 42.29 3.43
185 186 1.089920 GCAGCATTCTGTTCCATCGT 58.910 50.000 0.00 0.00 42.29 3.73
186 187 1.089112 TGCAGCATTCTGTTCCATCG 58.911 50.000 0.00 0.00 42.29 3.84
187 188 2.159282 CCTTGCAGCATTCTGTTCCATC 60.159 50.000 0.00 0.00 42.29 3.51
188 189 1.822990 CCTTGCAGCATTCTGTTCCAT 59.177 47.619 0.00 0.00 42.29 3.41
189 190 1.250328 CCTTGCAGCATTCTGTTCCA 58.750 50.000 0.00 0.00 42.29 3.53
190 191 1.200948 GACCTTGCAGCATTCTGTTCC 59.799 52.381 0.00 0.00 42.29 3.62
191 192 1.135859 CGACCTTGCAGCATTCTGTTC 60.136 52.381 0.00 0.00 42.29 3.18
192 193 0.877071 CGACCTTGCAGCATTCTGTT 59.123 50.000 0.00 0.00 42.29 3.16
193 194 0.035317 TCGACCTTGCAGCATTCTGT 59.965 50.000 0.00 0.00 42.29 3.41
194 195 0.445436 GTCGACCTTGCAGCATTCTG 59.555 55.000 3.51 0.00 43.16 3.02
195 196 0.322975 AGTCGACCTTGCAGCATTCT 59.677 50.000 13.01 0.00 0.00 2.40
196 197 0.445436 CAGTCGACCTTGCAGCATTC 59.555 55.000 13.01 0.00 0.00 2.67
197 198 0.035317 TCAGTCGACCTTGCAGCATT 59.965 50.000 13.01 0.00 0.00 3.56
198 199 0.390866 CTCAGTCGACCTTGCAGCAT 60.391 55.000 13.01 0.00 0.00 3.79
199 200 1.005748 CTCAGTCGACCTTGCAGCA 60.006 57.895 13.01 0.00 0.00 4.41
200 201 1.011451 GTCTCAGTCGACCTTGCAGC 61.011 60.000 13.01 0.00 0.00 5.25
201 202 0.600557 AGTCTCAGTCGACCTTGCAG 59.399 55.000 13.01 5.16 34.46 4.41
202 203 1.000163 GAAGTCTCAGTCGACCTTGCA 60.000 52.381 13.01 0.00 34.46 4.08
203 204 1.704070 GAAGTCTCAGTCGACCTTGC 58.296 55.000 13.01 0.00 34.46 4.01
204 205 1.267261 ACGAAGTCTCAGTCGACCTTG 59.733 52.381 13.01 5.07 29.74 3.61
205 206 1.606903 ACGAAGTCTCAGTCGACCTT 58.393 50.000 13.01 7.86 29.74 3.50
206 207 1.606903 AACGAAGTCTCAGTCGACCT 58.393 50.000 13.01 0.00 45.00 3.85
207 208 3.549299 TTAACGAAGTCTCAGTCGACC 57.451 47.619 13.01 0.00 45.00 4.79
208 209 5.392286 AGATTTAACGAAGTCTCAGTCGAC 58.608 41.667 7.70 7.70 45.00 4.20
209 210 5.624344 AGATTTAACGAAGTCTCAGTCGA 57.376 39.130 0.00 0.00 45.00 4.20
210 211 5.918387 GAGATTTAACGAAGTCTCAGTCG 57.082 43.478 5.59 0.00 45.00 4.18
215 216 5.508922 GTCGACTGAGATTTAACGAAGTCTC 59.491 44.000 8.70 0.00 45.00 3.36
216 217 5.181622 AGTCGACTGAGATTTAACGAAGTCT 59.818 40.000 19.30 0.00 45.00 3.24
217 218 5.284188 CAGTCGACTGAGATTTAACGAAGTC 59.716 44.000 36.73 0.00 44.12 3.01
218 219 5.154932 CAGTCGACTGAGATTTAACGAAGT 58.845 41.667 36.73 0.00 46.20 3.01
219 220 5.672653 CAGTCGACTGAGATTTAACGAAG 57.327 43.478 36.73 7.53 46.59 3.79
231 232 1.880271 ACGAAGTCTCAGTCGACTGA 58.120 50.000 38.24 38.24 44.92 3.41
232 233 2.690173 AACGAAGTCTCAGTCGACTG 57.310 50.000 34.76 34.76 45.00 3.51
233 234 4.825546 TTTAACGAAGTCTCAGTCGACT 57.174 40.909 13.58 13.58 45.00 4.18
234 235 5.392286 AGATTTAACGAAGTCTCAGTCGAC 58.608 41.667 7.70 7.70 45.00 4.20
235 236 5.624344 AGATTTAACGAAGTCTCAGTCGA 57.376 39.130 0.00 0.00 45.00 4.20
236 237 5.918387 GAGATTTAACGAAGTCTCAGTCG 57.082 43.478 5.59 0.00 45.00 4.18
241 242 5.508922 GTCGACTGAGATTTAACGAAGTCTC 59.491 44.000 8.70 0.00 45.00 3.36
242 243 5.181622 AGTCGACTGAGATTTAACGAAGTCT 59.818 40.000 19.30 0.00 45.00 3.24
243 244 5.284188 CAGTCGACTGAGATTTAACGAAGTC 59.716 44.000 36.73 0.00 44.12 3.01
244 245 5.154932 CAGTCGACTGAGATTTAACGAAGT 58.845 41.667 36.73 0.00 46.20 3.01
245 246 5.672653 CAGTCGACTGAGATTTAACGAAG 57.327 43.478 36.73 7.53 46.59 3.79
258 259 4.398247 GCTTGCTAAAAATCAGTCGACTG 58.602 43.478 34.76 34.76 45.08 3.51
259 260 3.437049 GGCTTGCTAAAAATCAGTCGACT 59.563 43.478 13.58 13.58 0.00 4.18
260 261 3.426292 GGGCTTGCTAAAAATCAGTCGAC 60.426 47.826 7.70 7.70 0.00 4.20
261 262 2.747446 GGGCTTGCTAAAAATCAGTCGA 59.253 45.455 0.00 0.00 0.00 4.20
262 263 2.476185 CGGGCTTGCTAAAAATCAGTCG 60.476 50.000 0.00 0.00 0.00 4.18
263 264 2.488153 ACGGGCTTGCTAAAAATCAGTC 59.512 45.455 0.00 0.00 0.00 3.51
264 265 2.514803 ACGGGCTTGCTAAAAATCAGT 58.485 42.857 0.00 0.00 0.00 3.41
265 266 4.156008 AGTTACGGGCTTGCTAAAAATCAG 59.844 41.667 0.00 0.00 0.00 2.90
266 267 4.076394 AGTTACGGGCTTGCTAAAAATCA 58.924 39.130 0.00 0.00 0.00 2.57
267 268 4.696899 AGTTACGGGCTTGCTAAAAATC 57.303 40.909 0.00 0.00 0.00 2.17
268 269 6.769134 AATAGTTACGGGCTTGCTAAAAAT 57.231 33.333 0.00 0.00 0.00 1.82
269 270 7.626876 GCTTAATAGTTACGGGCTTGCTAAAAA 60.627 37.037 0.00 0.00 0.00 1.94
270 271 6.183360 GCTTAATAGTTACGGGCTTGCTAAAA 60.183 38.462 0.00 0.00 0.00 1.52
271 272 5.295045 GCTTAATAGTTACGGGCTTGCTAAA 59.705 40.000 0.00 0.00 0.00 1.85
272 273 4.812626 GCTTAATAGTTACGGGCTTGCTAA 59.187 41.667 0.00 0.00 0.00 3.09
273 274 4.141892 TGCTTAATAGTTACGGGCTTGCTA 60.142 41.667 0.00 0.00 0.00 3.49
274 275 3.203716 GCTTAATAGTTACGGGCTTGCT 58.796 45.455 0.00 0.00 0.00 3.91
275 276 2.940410 TGCTTAATAGTTACGGGCTTGC 59.060 45.455 0.00 0.00 0.00 4.01
276 277 4.439057 TCTGCTTAATAGTTACGGGCTTG 58.561 43.478 0.00 0.00 0.00 4.01
277 278 4.161754 ACTCTGCTTAATAGTTACGGGCTT 59.838 41.667 0.00 0.00 0.00 4.35
278 279 3.705072 ACTCTGCTTAATAGTTACGGGCT 59.295 43.478 0.00 0.00 0.00 5.19
279 280 4.056092 ACTCTGCTTAATAGTTACGGGC 57.944 45.455 0.00 0.00 0.00 6.13
280 281 8.235905 GTCTATACTCTGCTTAATAGTTACGGG 58.764 40.741 0.00 0.00 0.00 5.28
281 282 9.001542 AGTCTATACTCTGCTTAATAGTTACGG 57.998 37.037 0.00 0.00 0.00 4.02
291 292 9.129532 GGTTACCTTTAGTCTATACTCTGCTTA 57.870 37.037 0.00 0.00 37.15 3.09
292 293 7.618512 TGGTTACCTTTAGTCTATACTCTGCTT 59.381 37.037 2.07 0.00 37.15 3.91
293 294 7.124052 TGGTTACCTTTAGTCTATACTCTGCT 58.876 38.462 2.07 0.00 37.15 4.24
294 295 7.344095 TGGTTACCTTTAGTCTATACTCTGC 57.656 40.000 2.07 0.00 37.15 4.26
295 296 8.361139 CCATGGTTACCTTTAGTCTATACTCTG 58.639 40.741 2.57 0.00 37.15 3.35
296 297 7.015389 GCCATGGTTACCTTTAGTCTATACTCT 59.985 40.741 14.67 0.00 37.15 3.24
297 298 7.153315 GCCATGGTTACCTTTAGTCTATACTC 58.847 42.308 14.67 0.00 37.15 2.59
298 299 6.042897 GGCCATGGTTACCTTTAGTCTATACT 59.957 42.308 14.67 0.00 39.91 2.12
299 300 6.228995 GGCCATGGTTACCTTTAGTCTATAC 58.771 44.000 14.67 0.00 0.00 1.47
300 301 5.011329 CGGCCATGGTTACCTTTAGTCTATA 59.989 44.000 14.67 0.00 0.00 1.31
301 302 4.202326 CGGCCATGGTTACCTTTAGTCTAT 60.202 45.833 14.67 0.00 0.00 1.98
302 303 3.133362 CGGCCATGGTTACCTTTAGTCTA 59.867 47.826 14.67 0.00 0.00 2.59
303 304 2.093128 CGGCCATGGTTACCTTTAGTCT 60.093 50.000 14.67 0.00 0.00 3.24
304 305 2.093341 TCGGCCATGGTTACCTTTAGTC 60.093 50.000 14.67 0.00 0.00 2.59
305 306 1.910671 TCGGCCATGGTTACCTTTAGT 59.089 47.619 14.67 0.00 0.00 2.24
306 307 2.702592 TCGGCCATGGTTACCTTTAG 57.297 50.000 14.67 0.00 0.00 1.85
307 308 3.655615 ATTCGGCCATGGTTACCTTTA 57.344 42.857 14.67 0.00 0.00 1.85
308 309 2.525105 ATTCGGCCATGGTTACCTTT 57.475 45.000 14.67 0.00 0.00 3.11
309 310 2.525105 AATTCGGCCATGGTTACCTT 57.475 45.000 14.67 0.00 0.00 3.50
310 311 3.876309 ATAATTCGGCCATGGTTACCT 57.124 42.857 14.67 0.00 0.00 3.08
311 312 4.822896 TGTAATAATTCGGCCATGGTTACC 59.177 41.667 14.67 5.12 0.00 2.85
312 313 6.261381 TCTTGTAATAATTCGGCCATGGTTAC 59.739 38.462 14.67 11.52 0.00 2.50
313 314 6.358178 TCTTGTAATAATTCGGCCATGGTTA 58.642 36.000 14.67 3.81 0.00 2.85
314 315 5.197451 TCTTGTAATAATTCGGCCATGGTT 58.803 37.500 14.67 1.29 0.00 3.67
315 316 4.787551 TCTTGTAATAATTCGGCCATGGT 58.212 39.130 14.67 0.00 0.00 3.55
316 317 5.964958 ATCTTGTAATAATTCGGCCATGG 57.035 39.130 7.63 7.63 0.00 3.66
317 318 8.267620 TCATATCTTGTAATAATTCGGCCATG 57.732 34.615 2.24 0.00 0.00 3.66
318 319 8.862325 TTCATATCTTGTAATAATTCGGCCAT 57.138 30.769 2.24 0.00 0.00 4.40
319 320 8.684386 TTTCATATCTTGTAATAATTCGGCCA 57.316 30.769 2.24 0.00 0.00 5.36
339 340 9.647797 TGACTTAGTCGTATGTGTTAATTTCAT 57.352 29.630 7.92 0.00 34.95 2.57
340 341 9.478768 TTGACTTAGTCGTATGTGTTAATTTCA 57.521 29.630 7.92 0.00 34.95 2.69
345 346 9.701098 AGATTTTGACTTAGTCGTATGTGTTAA 57.299 29.630 7.92 0.00 34.95 2.01
346 347 9.701098 AAGATTTTGACTTAGTCGTATGTGTTA 57.299 29.630 7.92 0.00 34.95 2.41
347 348 8.603242 AAGATTTTGACTTAGTCGTATGTGTT 57.397 30.769 7.92 0.00 34.95 3.32
348 349 7.331193 GGAAGATTTTGACTTAGTCGTATGTGT 59.669 37.037 7.92 0.00 34.95 3.72
349 350 7.201530 GGGAAGATTTTGACTTAGTCGTATGTG 60.202 40.741 7.92 0.00 34.95 3.21
350 351 6.817140 GGGAAGATTTTGACTTAGTCGTATGT 59.183 38.462 7.92 0.00 34.95 2.29
351 352 6.816640 TGGGAAGATTTTGACTTAGTCGTATG 59.183 38.462 7.92 0.00 34.95 2.39
352 353 6.942976 TGGGAAGATTTTGACTTAGTCGTAT 58.057 36.000 7.92 1.04 34.95 3.06
353 354 6.349243 TGGGAAGATTTTGACTTAGTCGTA 57.651 37.500 7.92 0.00 34.95 3.43
354 355 5.223449 TGGGAAGATTTTGACTTAGTCGT 57.777 39.130 7.92 0.00 34.95 4.34
355 356 6.743575 AATGGGAAGATTTTGACTTAGTCG 57.256 37.500 7.92 0.00 34.95 4.18
357 358 8.470002 GCATTAATGGGAAGATTTTGACTTAGT 58.530 33.333 17.02 0.00 0.00 2.24
358 359 7.922811 GGCATTAATGGGAAGATTTTGACTTAG 59.077 37.037 17.02 0.00 0.00 2.18
359 360 7.619302 AGGCATTAATGGGAAGATTTTGACTTA 59.381 33.333 17.02 0.00 0.00 2.24
360 361 6.441604 AGGCATTAATGGGAAGATTTTGACTT 59.558 34.615 17.02 0.00 0.00 3.01
361 362 5.960202 AGGCATTAATGGGAAGATTTTGACT 59.040 36.000 17.02 0.00 0.00 3.41
362 363 6.225981 AGGCATTAATGGGAAGATTTTGAC 57.774 37.500 17.02 0.00 0.00 3.18
363 364 6.872585 AAGGCATTAATGGGAAGATTTTGA 57.127 33.333 17.02 0.00 0.00 2.69
364 365 9.101655 CTTAAAGGCATTAATGGGAAGATTTTG 57.898 33.333 17.02 0.00 33.15 2.44
365 366 9.045745 TCTTAAAGGCATTAATGGGAAGATTTT 57.954 29.630 17.02 0.00 33.15 1.82
366 367 8.608185 TCTTAAAGGCATTAATGGGAAGATTT 57.392 30.769 17.02 0.00 33.15 2.17
367 368 8.608185 TTCTTAAAGGCATTAATGGGAAGATT 57.392 30.769 17.02 0.00 33.15 2.40
368 369 7.288621 CCTTCTTAAAGGCATTAATGGGAAGAT 59.711 37.037 17.02 0.00 45.50 2.40
369 370 6.607198 CCTTCTTAAAGGCATTAATGGGAAGA 59.393 38.462 17.02 2.91 45.50 2.87
370 371 6.809869 CCTTCTTAAAGGCATTAATGGGAAG 58.190 40.000 17.02 12.22 45.50 3.46
371 372 6.790232 CCTTCTTAAAGGCATTAATGGGAA 57.210 37.500 17.02 0.00 45.50 3.97
384 385 2.710096 TGGCCGATCCCTTCTTAAAG 57.290 50.000 0.00 0.00 0.00 1.85
385 386 3.053991 TCATTGGCCGATCCCTTCTTAAA 60.054 43.478 1.06 0.00 0.00 1.52
386 387 2.507886 TCATTGGCCGATCCCTTCTTAA 59.492 45.455 1.06 0.00 0.00 1.85
387 388 2.123589 TCATTGGCCGATCCCTTCTTA 58.876 47.619 1.06 0.00 0.00 2.10
388 389 0.918983 TCATTGGCCGATCCCTTCTT 59.081 50.000 1.06 0.00 0.00 2.52
389 390 0.918983 TTCATTGGCCGATCCCTTCT 59.081 50.000 1.06 0.00 0.00 2.85
390 391 1.986882 ATTCATTGGCCGATCCCTTC 58.013 50.000 1.06 0.00 0.00 3.46
391 392 2.489073 GGTATTCATTGGCCGATCCCTT 60.489 50.000 1.06 0.00 0.00 3.95
392 393 1.073923 GGTATTCATTGGCCGATCCCT 59.926 52.381 1.06 0.00 0.00 4.20
393 394 1.202879 TGGTATTCATTGGCCGATCCC 60.203 52.381 1.06 0.00 0.00 3.85
394 395 2.154462 CTGGTATTCATTGGCCGATCC 58.846 52.381 1.06 1.21 0.00 3.36
395 396 1.537202 GCTGGTATTCATTGGCCGATC 59.463 52.381 1.06 0.00 0.00 3.69
396 397 1.133823 TGCTGGTATTCATTGGCCGAT 60.134 47.619 0.00 0.00 0.00 4.18
397 398 0.254462 TGCTGGTATTCATTGGCCGA 59.746 50.000 0.00 0.00 0.00 5.54
398 399 0.381801 GTGCTGGTATTCATTGGCCG 59.618 55.000 0.00 0.00 0.00 6.13
399 400 1.473258 TGTGCTGGTATTCATTGGCC 58.527 50.000 0.00 0.00 0.00 5.36
400 401 2.287188 CGATGTGCTGGTATTCATTGGC 60.287 50.000 0.00 0.00 0.00 4.52
401 402 2.291465 CCGATGTGCTGGTATTCATTGG 59.709 50.000 0.00 0.00 36.10 3.16
402 403 2.287188 GCCGATGTGCTGGTATTCATTG 60.287 50.000 0.00 0.00 0.00 2.82
403 404 1.949525 GCCGATGTGCTGGTATTCATT 59.050 47.619 0.00 0.00 0.00 2.57
404 405 1.134128 TGCCGATGTGCTGGTATTCAT 60.134 47.619 0.00 0.00 0.00 2.57
405 406 0.251634 TGCCGATGTGCTGGTATTCA 59.748 50.000 0.00 0.00 0.00 2.57
406 407 1.378531 TTGCCGATGTGCTGGTATTC 58.621 50.000 0.00 0.00 0.00 1.75
407 408 1.832883 TTTGCCGATGTGCTGGTATT 58.167 45.000 0.00 0.00 0.00 1.89
408 409 2.057137 ATTTGCCGATGTGCTGGTAT 57.943 45.000 0.00 0.00 0.00 2.73
409 410 2.169561 TCTATTTGCCGATGTGCTGGTA 59.830 45.455 0.00 0.00 0.00 3.25
410 411 1.065491 TCTATTTGCCGATGTGCTGGT 60.065 47.619 0.00 0.00 0.00 4.00
411 412 1.600957 CTCTATTTGCCGATGTGCTGG 59.399 52.381 0.00 0.00 0.00 4.85
412 413 2.286294 GTCTCTATTTGCCGATGTGCTG 59.714 50.000 0.00 0.00 0.00 4.41
413 414 2.093500 TGTCTCTATTTGCCGATGTGCT 60.093 45.455 0.00 0.00 0.00 4.40
414 415 2.279741 TGTCTCTATTTGCCGATGTGC 58.720 47.619 0.00 0.00 0.00 4.57
415 416 3.684305 TGTTGTCTCTATTTGCCGATGTG 59.316 43.478 0.00 0.00 0.00 3.21
416 417 3.937814 TGTTGTCTCTATTTGCCGATGT 58.062 40.909 0.00 0.00 0.00 3.06
417 418 4.813161 AGATGTTGTCTCTATTTGCCGATG 59.187 41.667 0.00 0.00 28.45 3.84
418 419 5.028549 AGATGTTGTCTCTATTTGCCGAT 57.971 39.130 0.00 0.00 28.45 4.18
419 420 4.471904 AGATGTTGTCTCTATTTGCCGA 57.528 40.909 0.00 0.00 28.45 5.54
420 421 4.631377 TGAAGATGTTGTCTCTATTTGCCG 59.369 41.667 0.00 0.00 35.67 5.69
421 422 6.072508 TGTTGAAGATGTTGTCTCTATTTGCC 60.073 38.462 0.00 0.00 35.67 4.52
422 423 6.902341 TGTTGAAGATGTTGTCTCTATTTGC 58.098 36.000 0.00 0.00 35.67 3.68
423 424 8.019669 CCTTGTTGAAGATGTTGTCTCTATTTG 58.980 37.037 0.00 0.00 35.67 2.32
424 425 7.721399 ACCTTGTTGAAGATGTTGTCTCTATTT 59.279 33.333 0.00 0.00 35.67 1.40
425 426 7.227156 ACCTTGTTGAAGATGTTGTCTCTATT 58.773 34.615 0.00 0.00 35.67 1.73
426 427 6.773638 ACCTTGTTGAAGATGTTGTCTCTAT 58.226 36.000 0.00 0.00 35.67 1.98
427 428 6.174720 ACCTTGTTGAAGATGTTGTCTCTA 57.825 37.500 0.00 0.00 35.67 2.43
428 429 5.041191 ACCTTGTTGAAGATGTTGTCTCT 57.959 39.130 0.00 0.00 35.67 3.10
429 430 6.861065 TTACCTTGTTGAAGATGTTGTCTC 57.139 37.500 0.00 0.00 35.67 3.36
430 431 6.772716 ACATTACCTTGTTGAAGATGTTGTCT 59.227 34.615 0.00 0.00 39.43 3.41
431 432 6.970484 ACATTACCTTGTTGAAGATGTTGTC 58.030 36.000 0.00 0.00 0.00 3.18
432 433 6.293407 CGACATTACCTTGTTGAAGATGTTGT 60.293 38.462 0.00 0.00 33.53 3.32
433 434 6.079763 CGACATTACCTTGTTGAAGATGTTG 58.920 40.000 0.00 0.00 33.53 3.33
434 435 5.334879 GCGACATTACCTTGTTGAAGATGTT 60.335 40.000 0.00 0.00 33.53 2.71
435 436 4.154195 GCGACATTACCTTGTTGAAGATGT 59.846 41.667 0.00 0.00 33.53 3.06
436 437 4.154015 TGCGACATTACCTTGTTGAAGATG 59.846 41.667 0.00 0.00 33.53 2.90
437 438 4.323417 TGCGACATTACCTTGTTGAAGAT 58.677 39.130 0.00 0.00 33.53 2.40
438 439 3.734463 TGCGACATTACCTTGTTGAAGA 58.266 40.909 0.00 0.00 33.53 2.87
439 440 4.481930 TTGCGACATTACCTTGTTGAAG 57.518 40.909 0.00 0.00 33.53 3.02
440 441 4.902443 TTTGCGACATTACCTTGTTGAA 57.098 36.364 0.00 0.00 33.53 2.69
441 442 4.517075 TGATTTGCGACATTACCTTGTTGA 59.483 37.500 0.00 0.00 33.53 3.18
442 443 4.793071 TGATTTGCGACATTACCTTGTTG 58.207 39.130 0.00 0.00 34.63 3.33
443 444 5.640732 GATGATTTGCGACATTACCTTGTT 58.359 37.500 0.00 0.00 0.00 2.83
444 445 4.201812 CGATGATTTGCGACATTACCTTGT 60.202 41.667 0.00 0.00 0.00 3.16
445 446 4.201812 ACGATGATTTGCGACATTACCTTG 60.202 41.667 0.00 0.00 0.00 3.61
446 447 3.938963 ACGATGATTTGCGACATTACCTT 59.061 39.130 0.00 0.00 0.00 3.50
447 448 3.531538 ACGATGATTTGCGACATTACCT 58.468 40.909 0.00 0.00 0.00 3.08
448 449 3.944422 ACGATGATTTGCGACATTACC 57.056 42.857 0.00 0.00 0.00 2.85
449 450 4.647964 ACAACGATGATTTGCGACATTAC 58.352 39.130 0.00 0.00 0.00 1.89
450 451 4.937696 ACAACGATGATTTGCGACATTA 57.062 36.364 0.00 0.00 0.00 1.90
451 452 3.829886 ACAACGATGATTTGCGACATT 57.170 38.095 0.00 0.00 0.00 2.71
452 453 3.491356 CAACAACGATGATTTGCGACAT 58.509 40.909 0.00 0.00 0.00 3.06
453 454 2.914861 CAACAACGATGATTTGCGACA 58.085 42.857 0.00 0.00 0.00 4.35
454 455 1.643810 GCAACAACGATGATTTGCGAC 59.356 47.619 0.00 0.00 35.41 5.19
455 456 1.962412 GCAACAACGATGATTTGCGA 58.038 45.000 0.00 0.00 35.41 5.10
457 458 0.363178 GCGCAACAACGATGATTTGC 59.637 50.000 0.30 9.94 40.80 3.68
458 459 0.984109 GGCGCAACAACGATGATTTG 59.016 50.000 10.83 0.00 34.06 2.32
459 460 0.881118 AGGCGCAACAACGATGATTT 59.119 45.000 10.83 0.00 34.06 2.17
460 461 0.881118 AAGGCGCAACAACGATGATT 59.119 45.000 10.83 0.00 34.06 2.57
461 462 1.396996 GTAAGGCGCAACAACGATGAT 59.603 47.619 10.83 0.00 34.06 2.45
462 463 0.793861 GTAAGGCGCAACAACGATGA 59.206 50.000 10.83 0.00 34.06 2.92
463 464 0.515127 TGTAAGGCGCAACAACGATG 59.485 50.000 10.83 0.00 34.06 3.84
464 465 1.196808 CTTGTAAGGCGCAACAACGAT 59.803 47.619 10.83 0.00 32.43 3.73
465 466 0.584396 CTTGTAAGGCGCAACAACGA 59.416 50.000 10.83 0.20 32.43 3.85
466 467 0.306533 ACTTGTAAGGCGCAACAACG 59.693 50.000 10.83 12.12 32.43 4.10
467 468 2.803956 TCTACTTGTAAGGCGCAACAAC 59.196 45.455 10.83 1.69 32.43 3.32
468 469 3.114668 TCTACTTGTAAGGCGCAACAA 57.885 42.857 10.83 15.27 34.57 2.83
469 470 2.823924 TCTACTTGTAAGGCGCAACA 57.176 45.000 10.83 7.64 0.00 3.33
470 471 3.064931 ACTTCTACTTGTAAGGCGCAAC 58.935 45.455 10.83 4.60 0.00 4.17
471 472 3.006537 AGACTTCTACTTGTAAGGCGCAA 59.993 43.478 10.83 0.00 35.79 4.85
472 473 2.561419 AGACTTCTACTTGTAAGGCGCA 59.439 45.455 10.83 0.00 35.79 6.09
473 474 3.233684 AGACTTCTACTTGTAAGGCGC 57.766 47.619 0.00 0.00 35.79 6.53
474 475 6.541111 AAAAAGACTTCTACTTGTAAGGCG 57.459 37.500 0.00 0.00 35.79 5.52
496 497 0.483770 ACCCTAAAGCCCCGGAAAAA 59.516 50.000 0.73 0.00 0.00 1.94
497 498 0.483770 AACCCTAAAGCCCCGGAAAA 59.516 50.000 0.73 0.00 0.00 2.29
498 499 0.483770 AAACCCTAAAGCCCCGGAAA 59.516 50.000 0.73 0.00 0.00 3.13
499 500 1.282738 CTAAACCCTAAAGCCCCGGAA 59.717 52.381 0.73 0.00 0.00 4.30
500 501 0.913924 CTAAACCCTAAAGCCCCGGA 59.086 55.000 0.73 0.00 0.00 5.14
501 502 0.106868 CCTAAACCCTAAAGCCCCGG 60.107 60.000 0.00 0.00 0.00 5.73
502 503 0.106868 CCCTAAACCCTAAAGCCCCG 60.107 60.000 0.00 0.00 0.00 5.73
503 504 1.005228 ACCCTAAACCCTAAAGCCCC 58.995 55.000 0.00 0.00 0.00 5.80
504 505 2.913603 AACCCTAAACCCTAAAGCCC 57.086 50.000 0.00 0.00 0.00 5.19
505 506 4.018141 TCCTAAACCCTAAACCCTAAAGCC 60.018 45.833 0.00 0.00 0.00 4.35
506 507 5.045359 TCTCCTAAACCCTAAACCCTAAAGC 60.045 44.000 0.00 0.00 0.00 3.51
507 508 6.631763 TCTCCTAAACCCTAAACCCTAAAG 57.368 41.667 0.00 0.00 0.00 1.85
508 509 6.793988 TCTTCTCCTAAACCCTAAACCCTAAA 59.206 38.462 0.00 0.00 0.00 1.85
509 510 6.333479 TCTTCTCCTAAACCCTAAACCCTAA 58.667 40.000 0.00 0.00 0.00 2.69
510 511 5.919166 TCTTCTCCTAAACCCTAAACCCTA 58.081 41.667 0.00 0.00 0.00 3.53
511 512 4.771338 TCTTCTCCTAAACCCTAAACCCT 58.229 43.478 0.00 0.00 0.00 4.34
512 513 4.535294 ACTCTTCTCCTAAACCCTAAACCC 59.465 45.833 0.00 0.00 0.00 4.11
513 514 5.758790 ACTCTTCTCCTAAACCCTAAACC 57.241 43.478 0.00 0.00 0.00 3.27
514 515 7.718314 TGAAAACTCTTCTCCTAAACCCTAAAC 59.282 37.037 0.00 0.00 0.00 2.01
515 516 7.808218 TGAAAACTCTTCTCCTAAACCCTAAA 58.192 34.615 0.00 0.00 0.00 1.85
516 517 7.383156 TGAAAACTCTTCTCCTAAACCCTAA 57.617 36.000 0.00 0.00 0.00 2.69
517 518 7.236847 TGATGAAAACTCTTCTCCTAAACCCTA 59.763 37.037 0.00 0.00 0.00 3.53
518 519 5.906772 TGAAAACTCTTCTCCTAAACCCT 57.093 39.130 0.00 0.00 0.00 4.34
519 520 6.149640 GTGATGAAAACTCTTCTCCTAAACCC 59.850 42.308 0.00 0.00 0.00 4.11
520 521 6.710744 TGTGATGAAAACTCTTCTCCTAAACC 59.289 38.462 0.00 0.00 0.00 3.27
521 522 7.730364 TGTGATGAAAACTCTTCTCCTAAAC 57.270 36.000 0.00 0.00 0.00 2.01
522 523 8.621286 GTTTGTGATGAAAACTCTTCTCCTAAA 58.379 33.333 0.00 0.00 35.18 1.85
523 524 7.773224 TGTTTGTGATGAAAACTCTTCTCCTAA 59.227 33.333 0.00 0.00 38.17 2.69
524 525 7.279615 TGTTTGTGATGAAAACTCTTCTCCTA 58.720 34.615 0.00 0.00 38.17 2.94
525 526 6.122277 TGTTTGTGATGAAAACTCTTCTCCT 58.878 36.000 0.00 0.00 38.17 3.69
526 527 6.377327 TGTTTGTGATGAAAACTCTTCTCC 57.623 37.500 0.00 0.00 38.17 3.71
550 551 9.970395 ACACGTCGGAATATGAAACTAATATTA 57.030 29.630 0.00 0.00 31.79 0.98
551 552 8.882415 ACACGTCGGAATATGAAACTAATATT 57.118 30.769 0.00 0.00 33.82 1.28
553 554 9.970395 AATACACGTCGGAATATGAAACTAATA 57.030 29.630 0.00 0.00 0.00 0.98
554 555 8.882415 AATACACGTCGGAATATGAAACTAAT 57.118 30.769 0.00 0.00 0.00 1.73
555 556 9.970395 ATAATACACGTCGGAATATGAAACTAA 57.030 29.630 0.00 0.00 0.00 2.24
556 557 9.616634 GATAATACACGTCGGAATATGAAACTA 57.383 33.333 0.00 0.00 0.00 2.24
557 558 7.325338 CGATAATACACGTCGGAATATGAAACT 59.675 37.037 0.00 0.00 0.00 2.66
558 559 7.324375 TCGATAATACACGTCGGAATATGAAAC 59.676 37.037 0.00 0.00 36.14 2.78
559 560 7.361894 TCGATAATACACGTCGGAATATGAAA 58.638 34.615 0.00 0.00 36.14 2.69
560 561 6.901265 TCGATAATACACGTCGGAATATGAA 58.099 36.000 0.00 0.00 36.14 2.57
561 562 6.402875 CCTCGATAATACACGTCGGAATATGA 60.403 42.308 0.00 0.00 36.14 2.15
562 563 5.737757 CCTCGATAATACACGTCGGAATATG 59.262 44.000 0.00 0.00 36.14 1.78
563 564 5.413833 ACCTCGATAATACACGTCGGAATAT 59.586 40.000 0.00 0.00 36.14 1.28
564 565 4.756642 ACCTCGATAATACACGTCGGAATA 59.243 41.667 0.00 0.00 36.14 1.75
565 566 3.567164 ACCTCGATAATACACGTCGGAAT 59.433 43.478 0.00 0.00 36.14 3.01
566 567 2.945008 ACCTCGATAATACACGTCGGAA 59.055 45.455 0.00 0.00 36.14 4.30
567 568 2.564771 ACCTCGATAATACACGTCGGA 58.435 47.619 0.00 0.00 36.14 4.55
568 569 4.391216 AGATACCTCGATAATACACGTCGG 59.609 45.833 0.00 0.00 36.14 4.79
569 570 5.348179 AGAGATACCTCGATAATACACGTCG 59.652 44.000 0.00 0.00 44.08 5.12
573 574 7.145985 TGCAAAGAGATACCTCGATAATACAC 58.854 38.462 0.00 0.00 44.08 2.90
582 583 4.567159 GGTAGTTTGCAAAGAGATACCTCG 59.433 45.833 23.07 0.00 44.08 4.63
666 668 2.167918 GTTGACGTCAACGCTCGC 59.832 61.111 37.33 19.59 45.44 5.03
677 679 2.489971 TGGCTTACCTTTGAGTTGACG 58.510 47.619 0.00 0.00 36.63 4.35
689 691 1.745489 CTCCGGTGCTTGGCTTACC 60.745 63.158 0.00 0.00 0.00 2.85
711 713 4.664150 TTTCCATTCTCAACGCCTTTTT 57.336 36.364 0.00 0.00 0.00 1.94
777 779 1.872952 CGTTGTTGGTCAGAAGATGCA 59.127 47.619 0.00 0.00 0.00 3.96
792 794 1.890510 GTGAACTTCCGGCCGTTGT 60.891 57.895 26.12 16.38 0.00 3.32
812 814 5.106396 CCTTGCTGTCCTGCTTATATATTGC 60.106 44.000 0.00 0.00 0.00 3.56
832 834 4.392940 TCTCTTCTTTCTTGGCTTCCTTG 58.607 43.478 0.00 0.00 0.00 3.61
859 861 1.280421 CCTCTCTCCCTTGGGTTTCTG 59.720 57.143 5.51 0.00 0.00 3.02
896 898 2.728007 AGTAGAATTTCTGGCCAAGGC 58.272 47.619 7.01 1.52 41.06 4.35
897 899 5.012893 AGAAAGTAGAATTTCTGGCCAAGG 58.987 41.667 7.01 0.00 45.52 3.61
923 927 2.627945 TGCAGATCGGTAATGAACACC 58.372 47.619 0.00 0.00 0.00 4.16
924 928 3.546815 GCATGCAGATCGGTAATGAACAC 60.547 47.826 14.21 0.00 0.00 3.32
925 929 2.613595 GCATGCAGATCGGTAATGAACA 59.386 45.455 14.21 0.00 0.00 3.18
926 930 2.348872 CGCATGCAGATCGGTAATGAAC 60.349 50.000 19.57 0.00 0.00 3.18
932 955 0.875908 GAAGCGCATGCAGATCGGTA 60.876 55.000 19.57 0.00 46.23 4.02
948 971 7.496529 TTTGACCTTTGATCACTTGTAGAAG 57.503 36.000 0.00 0.00 35.07 2.85
949 972 6.017109 GCTTTGACCTTTGATCACTTGTAGAA 60.017 38.462 0.00 0.00 0.00 2.10
951 974 5.471456 AGCTTTGACCTTTGATCACTTGTAG 59.529 40.000 0.00 0.00 0.00 2.74
983 1006 7.277174 TCCATCATATATATCAGTGCCTACG 57.723 40.000 0.00 0.00 0.00 3.51
1190 1216 1.142748 CAGGTAGCGGCTCCTCTTG 59.857 63.158 5.39 1.66 30.91 3.02
1245 1277 2.115291 GGGGAATTGGAGCTGCGAC 61.115 63.158 0.00 0.00 0.00 5.19
1465 1504 1.293963 GCTCTGCAATGACGTGCTCA 61.294 55.000 0.00 0.00 45.17 4.26
1542 1581 1.218316 GGTACCTTCCTGACGCCAG 59.782 63.158 4.06 0.00 40.09 4.85
1543 1582 3.384348 GGTACCTTCCTGACGCCA 58.616 61.111 4.06 0.00 0.00 5.69
1597 1647 9.941664 CTATAAACATGACCAAGCTTTATGAAG 57.058 33.333 0.00 0.00 35.92 3.02
1723 2025 8.554528 ACATCAAGCTTCATATAACTTTGATCG 58.445 33.333 0.00 0.00 0.00 3.69
1747 2074 7.908827 TTTTACTCCGCATATAAGTTTGACA 57.091 32.000 0.00 0.00 0.00 3.58
1748 2075 8.662141 TCTTTTTACTCCGCATATAAGTTTGAC 58.338 33.333 0.00 0.00 0.00 3.18
1804 2131 0.251253 TCACACAGATGCCATTGCCA 60.251 50.000 0.00 0.00 36.33 4.92
2047 5899 3.148279 ATCCACCGGGCTCGAGTC 61.148 66.667 8.08 12.27 39.00 3.36
2206 6152 3.439129 ACTAGCCACCGCAGTTTATTTTC 59.561 43.478 0.00 0.00 37.52 2.29
2241 6193 8.316214 AGTGAACATGCCAATCTTTTGATATTT 58.684 29.630 0.00 0.00 38.40 1.40
2284 6238 1.164041 AACTGCAGACGAAAACCCCG 61.164 55.000 23.35 0.00 0.00 5.73
2407 6363 1.227823 CCACGGCCACACTCAGAAA 60.228 57.895 2.24 0.00 0.00 2.52
2420 6377 4.991056 CACTCATAGAAATGGATACCACGG 59.009 45.833 0.00 0.00 35.80 4.94
2444 6401 3.937814 ACAGAGTTCACACAACAGACAA 58.062 40.909 0.00 0.00 0.00 3.18
2445 6402 3.610040 ACAGAGTTCACACAACAGACA 57.390 42.857 0.00 0.00 0.00 3.41
2446 6403 4.026804 CGTTACAGAGTTCACACAACAGAC 60.027 45.833 0.00 0.00 0.00 3.51
2447 6404 4.109766 CGTTACAGAGTTCACACAACAGA 58.890 43.478 0.00 0.00 0.00 3.41
2448 6405 4.109766 TCGTTACAGAGTTCACACAACAG 58.890 43.478 0.00 0.00 0.00 3.16
2449 6406 4.112716 TCGTTACAGAGTTCACACAACA 57.887 40.909 0.00 0.00 0.00 3.33
2450 6407 5.652744 AATCGTTACAGAGTTCACACAAC 57.347 39.130 0.00 0.00 0.00 3.32
2469 6426 5.473504 TGCTCAGGAAAGGTAAACTGAAATC 59.526 40.000 0.00 0.00 39.26 2.17
2637 6595 3.031964 GCCGCACACACTCAGCATC 62.032 63.158 0.00 0.00 0.00 3.91
2730 6697 5.221224 TGCCGAGTTTTTCATTCTGAATGTT 60.221 36.000 25.08 9.18 36.11 2.71
2766 8512 2.418976 GCCATCCTTAAAACAGTCGGTC 59.581 50.000 0.00 0.00 0.00 4.79
2769 8515 4.662145 GATTGCCATCCTTAAAACAGTCG 58.338 43.478 0.00 0.00 0.00 4.18
2821 8568 2.425592 CCTCCTGTCAACCACGCA 59.574 61.111 0.00 0.00 0.00 5.24
2836 10384 2.058675 GTGACTGCACCACTACCCT 58.941 57.895 7.12 0.00 39.14 4.34
2837 10385 4.695560 GTGACTGCACCACTACCC 57.304 61.111 7.12 0.00 39.14 3.69
2845 10393 0.590195 CTCAGCAAAGGTGACTGCAC 59.410 55.000 0.00 0.00 42.68 4.57
2847 10395 2.072298 CTACTCAGCAAAGGTGACTGC 58.928 52.381 0.00 0.00 42.68 4.40
2860 10408 1.474478 TGCTCTTTCTCGGCTACTCAG 59.526 52.381 0.00 0.00 0.00 3.35
2861 10409 1.202582 GTGCTCTTTCTCGGCTACTCA 59.797 52.381 0.00 0.00 0.00 3.41
2862 10410 1.474879 AGTGCTCTTTCTCGGCTACTC 59.525 52.381 0.00 0.00 0.00 2.59
2863 10411 1.474879 GAGTGCTCTTTCTCGGCTACT 59.525 52.381 0.00 0.00 0.00 2.57
2865 10413 0.452184 CGAGTGCTCTTTCTCGGCTA 59.548 55.000 6.67 0.00 46.26 3.93
2866 10414 1.214062 CGAGTGCTCTTTCTCGGCT 59.786 57.895 6.67 0.00 46.26 5.52
2870 10418 4.749976 AGATTTACCGAGTGCTCTTTCTC 58.250 43.478 0.00 0.00 0.00 2.87
2872 10420 5.864628 AAAGATTTACCGAGTGCTCTTTC 57.135 39.130 0.00 0.00 29.44 2.62
2873 10421 6.635030 AAAAAGATTTACCGAGTGCTCTTT 57.365 33.333 0.00 0.00 35.16 2.52
2894 10442 9.665719 AAAGCAAATAAAGGACAGAAAGAAAAA 57.334 25.926 0.00 0.00 0.00 1.94
2895 10443 9.313118 GAAAGCAAATAAAGGACAGAAAGAAAA 57.687 29.630 0.00 0.00 0.00 2.29
2896 10444 8.695456 AGAAAGCAAATAAAGGACAGAAAGAAA 58.305 29.630 0.00 0.00 0.00 2.52
2897 10445 8.237811 AGAAAGCAAATAAAGGACAGAAAGAA 57.762 30.769 0.00 0.00 0.00 2.52
2901 10449 7.721399 AGAGAAGAAAGCAAATAAAGGACAGAA 59.279 33.333 0.00 0.00 0.00 3.02
2903 10451 7.446001 AGAGAAGAAAGCAAATAAAGGACAG 57.554 36.000 0.00 0.00 0.00 3.51
2904 10452 7.721399 AGAAGAGAAGAAAGCAAATAAAGGACA 59.279 33.333 0.00 0.00 0.00 4.02
2906 10454 8.160106 AGAGAAGAGAAGAAAGCAAATAAAGGA 58.840 33.333 0.00 0.00 0.00 3.36
2912 10460 9.737844 AAGATAAGAGAAGAGAAGAAAGCAAAT 57.262 29.630 0.00 0.00 0.00 2.32
2913 10461 9.213799 GAAGATAAGAGAAGAGAAGAAAGCAAA 57.786 33.333 0.00 0.00 0.00 3.68
2914 10462 8.592809 AGAAGATAAGAGAAGAGAAGAAAGCAA 58.407 33.333 0.00 0.00 0.00 3.91
2916 10464 9.435688 AAAGAAGATAAGAGAAGAGAAGAAAGC 57.564 33.333 0.00 0.00 0.00 3.51
2949 10497 8.016801 CGTAAGCCTTTTTCGGTAATAAAGAAA 58.983 33.333 0.00 0.00 32.03 2.52
2950 10498 7.520686 CGTAAGCCTTTTTCGGTAATAAAGAA 58.479 34.615 0.00 0.00 32.03 2.52
2970 10518 5.927954 TTATTTATAAAGCGGGGCGTAAG 57.072 39.130 3.94 0.00 43.44 2.34
2971 10519 6.303021 CTTTATTTATAAAGCGGGGCGTAA 57.697 37.500 8.78 0.00 41.69 3.18
2972 10520 5.927954 CTTTATTTATAAAGCGGGGCGTA 57.072 39.130 8.78 0.00 41.69 4.42
2973 10521 4.823790 CTTTATTTATAAAGCGGGGCGT 57.176 40.909 8.78 0.00 41.69 5.68
2982 10530 6.151312 TCTGTGGCGGTTGCTTTATTTATAAA 59.849 34.615 0.00 0.00 42.25 1.40
2983 10531 5.648526 TCTGTGGCGGTTGCTTTATTTATAA 59.351 36.000 0.00 0.00 42.25 0.98
2984 10532 5.186942 TCTGTGGCGGTTGCTTTATTTATA 58.813 37.500 0.00 0.00 42.25 0.98
2985 10533 4.013728 TCTGTGGCGGTTGCTTTATTTAT 58.986 39.130 0.00 0.00 42.25 1.40
2986 10534 3.413327 TCTGTGGCGGTTGCTTTATTTA 58.587 40.909 0.00 0.00 42.25 1.40
2987 10535 2.228822 CTCTGTGGCGGTTGCTTTATTT 59.771 45.455 0.00 0.00 42.25 1.40
2988 10536 1.812571 CTCTGTGGCGGTTGCTTTATT 59.187 47.619 0.00 0.00 42.25 1.40
2989 10537 1.453155 CTCTGTGGCGGTTGCTTTAT 58.547 50.000 0.00 0.00 42.25 1.40
2990 10538 1.234615 GCTCTGTGGCGGTTGCTTTA 61.235 55.000 0.00 0.00 42.25 1.85
2991 10539 2.555547 GCTCTGTGGCGGTTGCTTT 61.556 57.895 0.00 0.00 42.25 3.51
2993 10541 2.184020 TATGCTCTGTGGCGGTTGCT 62.184 55.000 0.00 0.00 42.25 3.91
2995 10543 0.673333 TGTATGCTCTGTGGCGGTTG 60.673 55.000 0.00 0.00 34.52 3.77
2996 10544 0.253044 ATGTATGCTCTGTGGCGGTT 59.747 50.000 0.00 0.00 34.52 4.44
2997 10545 1.119684 TATGTATGCTCTGTGGCGGT 58.880 50.000 0.00 0.00 34.52 5.68
2998 10546 1.502231 GTATGTATGCTCTGTGGCGG 58.498 55.000 0.00 0.00 34.52 6.13
2999 10547 1.202521 TGGTATGTATGCTCTGTGGCG 60.203 52.381 0.00 0.00 34.52 5.69
3000 10548 2.213499 GTGGTATGTATGCTCTGTGGC 58.787 52.381 0.00 0.00 0.00 5.01
3001 10549 3.541996 TGTGGTATGTATGCTCTGTGG 57.458 47.619 0.00 0.00 0.00 4.17
3003 10551 5.474578 CCTATGTGGTATGTATGCTCTGT 57.525 43.478 0.00 0.00 0.00 3.41
3017 10565 1.073125 TGTTGGTGTGGACCTATGTGG 59.927 52.381 0.00 0.00 43.58 4.17
3018 10566 2.151202 GTGTTGGTGTGGACCTATGTG 58.849 52.381 0.00 0.00 43.58 3.21
3019 10567 1.771854 TGTGTTGGTGTGGACCTATGT 59.228 47.619 0.00 0.00 43.58 2.29
3020 10568 2.151202 GTGTGTTGGTGTGGACCTATG 58.849 52.381 0.00 0.00 43.58 2.23
3021 10569 1.771854 TGTGTGTTGGTGTGGACCTAT 59.228 47.619 0.00 0.00 43.58 2.57
3023 10571 0.393808 GTGTGTGTTGGTGTGGACCT 60.394 55.000 0.00 0.00 43.58 3.85
3024 10572 1.711060 CGTGTGTGTTGGTGTGGACC 61.711 60.000 0.00 0.00 43.48 4.46
3025 10573 0.741574 TCGTGTGTGTTGGTGTGGAC 60.742 55.000 0.00 0.00 0.00 4.02
3026 10574 0.461163 CTCGTGTGTGTTGGTGTGGA 60.461 55.000 0.00 0.00 0.00 4.02
3028 10576 0.650512 GACTCGTGTGTGTTGGTGTG 59.349 55.000 0.00 0.00 0.00 3.82
3029 10577 0.535335 AGACTCGTGTGTGTTGGTGT 59.465 50.000 0.00 0.00 0.00 4.16
3030 10578 1.209128 GAGACTCGTGTGTGTTGGTG 58.791 55.000 0.00 0.00 0.00 4.17
3031 10579 0.821517 TGAGACTCGTGTGTGTTGGT 59.178 50.000 0.00 0.00 0.00 3.67
3033 10581 1.067060 TCCTGAGACTCGTGTGTGTTG 59.933 52.381 0.00 0.00 0.00 3.33
3034 10582 1.399714 TCCTGAGACTCGTGTGTGTT 58.600 50.000 0.00 0.00 0.00 3.32
3035 10583 1.399714 TTCCTGAGACTCGTGTGTGT 58.600 50.000 0.00 0.00 0.00 3.72
3036 10584 2.509052 TTTCCTGAGACTCGTGTGTG 57.491 50.000 0.00 0.00 0.00 3.82
3037 10585 2.431057 ACTTTTCCTGAGACTCGTGTGT 59.569 45.455 0.00 0.00 0.00 3.72
3038 10586 3.099267 ACTTTTCCTGAGACTCGTGTG 57.901 47.619 0.00 0.00 0.00 3.82
3039 10587 3.635373 TGTACTTTTCCTGAGACTCGTGT 59.365 43.478 0.00 0.00 0.00 4.49
3041 10589 4.931661 TTGTACTTTTCCTGAGACTCGT 57.068 40.909 0.00 0.00 0.00 4.18
3042 10590 4.686554 CCTTTGTACTTTTCCTGAGACTCG 59.313 45.833 0.00 0.00 0.00 4.18
3047 11397 5.278022 GCAGAACCTTTGTACTTTTCCTGAG 60.278 44.000 0.00 0.00 0.00 3.35
3055 11405 3.496870 CCCTCAGCAGAACCTTTGTACTT 60.497 47.826 0.00 0.00 0.00 2.24
3058 11408 1.271379 GCCCTCAGCAGAACCTTTGTA 60.271 52.381 0.00 0.00 42.97 2.41
3060 11410 2.261215 GCCCTCAGCAGAACCTTTG 58.739 57.895 0.00 0.00 42.97 2.77
3061 11411 4.830573 GCCCTCAGCAGAACCTTT 57.169 55.556 0.00 0.00 42.97 3.11
3073 11423 2.251600 CTTGTTGAGCTGTGCCCTC 58.748 57.895 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.