Multiple sequence alignment - TraesCS5A01G550900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G550900 chr5A 100.000 5164 0 0 1 5164 704464613 704459450 0.000000e+00 9537.0
1 TraesCS5A01G550900 chr5A 89.731 409 22 10 266 673 38977194 38977583 5.970000e-139 505.0
2 TraesCS5A01G550900 chr5A 96.800 250 7 1 1 250 38976514 38976762 2.880000e-112 416.0
3 TraesCS5A01G550900 chr5A 96.800 250 7 1 1 250 546872109 546871861 2.880000e-112 416.0
4 TraesCS5A01G550900 chr5A 85.859 198 25 1 1329 1526 704463057 704462863 1.880000e-49 207.0
5 TraesCS5A01G550900 chr5A 85.859 198 25 1 1557 1751 704463285 704463088 1.880000e-49 207.0
6 TraesCS5A01G550900 chr5A 93.750 64 4 0 2412 2475 704462125 704462062 4.260000e-16 97.1
7 TraesCS5A01G550900 chr5A 93.750 64 4 0 2489 2552 704462202 704462139 4.260000e-16 97.1
8 TraesCS5A01G550900 chrUn 85.536 1604 121 48 687 2219 109018033 109019596 0.000000e+00 1574.0
9 TraesCS5A01G550900 chrUn 87.113 1226 101 35 3658 4860 109020746 109021937 0.000000e+00 1336.0
10 TraesCS5A01G550900 chrUn 82.645 484 62 17 2254 2727 109019592 109020063 4.810000e-110 409.0
11 TraesCS5A01G550900 chrUn 89.701 301 20 8 3251 3542 109020393 109020691 1.760000e-99 374.0
12 TraesCS5A01G550900 chrUn 87.607 234 23 3 1302 1532 109018886 109019116 3.070000e-67 267.0
13 TraesCS5A01G550900 chrUn 86.224 196 18 8 2937 3130 109020136 109020324 2.440000e-48 204.0
14 TraesCS5A01G550900 chrUn 95.522 67 3 0 2488 2554 109019748 109019814 1.970000e-19 108.0
15 TraesCS5A01G550900 chrUn 92.000 75 4 2 2412 2485 109019823 109019896 2.540000e-18 104.0
16 TraesCS5A01G550900 chr4B 86.811 1198 91 39 3695 4860 664769335 664768173 0.000000e+00 1275.0
17 TraesCS5A01G550900 chr4B 79.373 1372 131 72 771 2074 664772068 664770781 0.000000e+00 826.0
18 TraesCS5A01G550900 chr4B 92.487 559 36 4 2678 3234 664770368 664769814 0.000000e+00 795.0
19 TraesCS5A01G550900 chr4B 92.012 338 19 4 3230 3559 664769735 664769398 7.830000e-128 468.0
20 TraesCS5A01G550900 chr4B 87.332 371 22 6 2135 2482 664770761 664770393 8.050000e-108 401.0
21 TraesCS5A01G550900 chr7D 93.687 396 15 3 269 664 175677242 175676857 7.450000e-163 584.0
22 TraesCS5A01G550900 chr7D 93.216 398 16 3 269 666 175673972 175673586 4.480000e-160 575.0
23 TraesCS5A01G550900 chr7D 97.200 250 6 1 1 250 175677921 175677673 6.180000e-114 422.0
24 TraesCS5A01G550900 chr7D 97.200 250 4 2 1 250 175674650 175674404 2.220000e-113 420.0
25 TraesCS5A01G550900 chr6A 92.965 398 18 2 269 666 22256307 22255920 5.800000e-159 571.0
26 TraesCS5A01G550900 chr6A 92.768 401 19 2 266 666 22259753 22260143 5.800000e-159 571.0
27 TraesCS5A01G550900 chr6A 97.600 250 5 1 1 250 22256988 22256740 1.330000e-115 427.0
28 TraesCS5A01G550900 chr6A 97.600 250 5 1 1 250 22259075 22259323 1.330000e-115 427.0
29 TraesCS5A01G550900 chr3A 92.714 398 19 2 269 666 696590345 696589958 2.700000e-157 566.0
30 TraesCS5A01G550900 chr3A 88.000 400 21 10 266 665 271636914 271637286 1.020000e-121 448.0
31 TraesCS5A01G550900 chr3A 98.000 250 4 1 1 250 696591026 696590778 2.860000e-117 433.0
32 TraesCS5A01G550900 chr3A 97.600 250 5 1 1 250 271636239 271636487 1.330000e-115 427.0
33 TraesCS5A01G550900 chr6B 91.771 401 19 4 266 666 706892727 706893113 3.520000e-151 545.0
34 TraesCS5A01G550900 chr6B 97.600 250 5 1 1 250 706891854 706892102 1.330000e-115 427.0
35 TraesCS5A01G550900 chr7B 91.339 381 18 6 269 648 689931480 689931114 1.660000e-139 507.0
36 TraesCS5A01G550900 chr3B 91.339 381 18 6 269 648 463098580 463098214 1.660000e-139 507.0
37 TraesCS5A01G550900 chr1B 91.146 384 19 6 266 648 138849651 138850020 1.660000e-139 507.0
38 TraesCS5A01G550900 chr1A 82.667 600 76 17 1604 2196 218309298 218308720 1.660000e-139 507.0
39 TraesCS5A01G550900 chr4A 89.330 403 20 8 266 667 73934383 73934763 7.770000e-133 484.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G550900 chr5A 704459450 704464613 5163 True 2029.04 9537 91.84360 1 5164 5 chr5A.!!$R2 5163
1 TraesCS5A01G550900 chr5A 38976514 38977583 1069 False 460.50 505 93.26550 1 673 2 chr5A.!!$F1 672
2 TraesCS5A01G550900 chrUn 109018033 109021937 3904 False 547.00 1574 88.29350 687 4860 8 chrUn.!!$F1 4173
3 TraesCS5A01G550900 chr4B 664768173 664772068 3895 True 753.00 1275 87.60300 771 4860 5 chr4B.!!$R1 4089
4 TraesCS5A01G550900 chr7D 175673586 175677921 4335 True 500.25 584 95.32575 1 666 4 chr7D.!!$R1 665
5 TraesCS5A01G550900 chr6A 22255920 22256988 1068 True 499.00 571 95.28250 1 666 2 chr6A.!!$R1 665
6 TraesCS5A01G550900 chr6A 22259075 22260143 1068 False 499.00 571 95.18400 1 666 2 chr6A.!!$F1 665
7 TraesCS5A01G550900 chr3A 696589958 696591026 1068 True 499.50 566 95.35700 1 666 2 chr3A.!!$R1 665
8 TraesCS5A01G550900 chr3A 271636239 271637286 1047 False 437.50 448 92.80000 1 665 2 chr3A.!!$F1 664
9 TraesCS5A01G550900 chr6B 706891854 706893113 1259 False 486.00 545 94.68550 1 666 2 chr6B.!!$F1 665
10 TraesCS5A01G550900 chr1A 218308720 218309298 578 True 507.00 507 82.66700 1604 2196 1 chr1A.!!$R1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 4571 0.038166 CCCGGTAGGCGGTAGGTATA 59.962 60.0 0.0 0.0 35.76 1.47 F
1037 4944 0.253327 GACATCCACCACCTCTTCCC 59.747 60.0 0.0 0.0 0.00 3.97 F
2133 6168 0.322816 AACATTGCATCTGGGCTCGT 60.323 50.0 0.0 0.0 34.04 4.18 F
3924 8121 0.523072 GCGACATGATTTGCCTGTGT 59.477 50.0 0.0 0.0 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2640 6700 1.028130 CAGCTCTCCTGCGATACTGA 58.972 55.0 0.00 0.00 38.13 3.41 R
2911 6971 0.949105 AGATTGCGGAACACGGTGAC 60.949 55.0 16.29 8.21 44.51 3.67 R
3933 8130 0.037303 CCATGACAGTGGCCAAGTCT 59.963 55.0 29.36 13.67 33.56 3.24 R
4968 9196 0.038310 AGTACCTTTTGGCTGGCTCC 59.962 55.0 2.00 0.00 45.59 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 127 0.529378 CTGGCATTGTTCCTTGCTCC 59.471 55.000 0.00 0.00 38.88 4.70
341 960 6.690530 CACAACAACAAACCTATGGATGATT 58.309 36.000 0.00 0.00 0.00 2.57
342 961 7.153985 CACAACAACAAACCTATGGATGATTT 58.846 34.615 0.00 0.00 0.00 2.17
648 4537 3.790437 CGTGCAGGGATCCCAGCT 61.790 66.667 38.73 16.83 46.88 4.24
649 4538 2.124403 GTGCAGGGATCCCAGCTG 60.124 66.667 38.73 26.88 46.88 4.24
650 4539 4.119363 TGCAGGGATCCCAGCTGC 62.119 66.667 38.73 33.57 46.88 5.25
651 4540 3.806667 GCAGGGATCCCAGCTGCT 61.807 66.667 34.61 11.49 43.97 4.24
669 4558 4.828296 GGAGAGCCCGACCCGGTA 62.828 72.222 0.00 0.00 46.80 4.02
670 4559 3.217743 GAGAGCCCGACCCGGTAG 61.218 72.222 0.00 0.00 46.80 3.18
671 4560 4.835891 AGAGCCCGACCCGGTAGG 62.836 72.222 9.73 9.73 46.80 3.18
677 4566 3.589881 CGACCCGGTAGGCGGTAG 61.590 72.222 0.00 0.00 40.58 3.18
678 4567 3.222121 GACCCGGTAGGCGGTAGG 61.222 72.222 0.00 0.00 40.58 3.18
679 4568 4.066139 ACCCGGTAGGCGGTAGGT 62.066 66.667 0.00 0.00 40.58 3.08
680 4569 2.195683 CCCGGTAGGCGGTAGGTA 59.804 66.667 0.00 0.00 35.76 3.08
681 4570 1.228675 CCCGGTAGGCGGTAGGTAT 60.229 63.158 0.00 0.00 35.76 2.73
682 4571 0.038166 CCCGGTAGGCGGTAGGTATA 59.962 60.000 0.00 0.00 35.76 1.47
683 4572 1.341383 CCCGGTAGGCGGTAGGTATAT 60.341 57.143 0.00 0.00 35.76 0.86
684 4573 2.092429 CCCGGTAGGCGGTAGGTATATA 60.092 54.545 0.00 0.00 35.76 0.86
685 4574 3.620488 CCGGTAGGCGGTAGGTATATAA 58.380 50.000 0.00 0.00 0.00 0.98
686 4575 4.016444 CCGGTAGGCGGTAGGTATATAAA 58.984 47.826 0.00 0.00 0.00 1.40
687 4576 4.142381 CCGGTAGGCGGTAGGTATATAAAC 60.142 50.000 0.00 0.00 0.00 2.01
688 4577 4.142381 CGGTAGGCGGTAGGTATATAAACC 60.142 50.000 0.00 0.00 40.06 3.27
689 4578 4.160439 GGTAGGCGGTAGGTATATAAACCC 59.840 50.000 5.15 0.00 40.71 4.11
690 4579 3.860607 AGGCGGTAGGTATATAAACCCA 58.139 45.455 5.15 0.00 40.71 4.51
691 4580 4.233729 AGGCGGTAGGTATATAAACCCAA 58.766 43.478 5.15 0.00 40.71 4.12
692 4581 4.040829 AGGCGGTAGGTATATAAACCCAAC 59.959 45.833 5.15 0.00 40.71 3.77
693 4582 4.202346 GGCGGTAGGTATATAAACCCAACA 60.202 45.833 5.15 0.00 40.71 3.33
694 4583 4.992951 GCGGTAGGTATATAAACCCAACAG 59.007 45.833 5.15 1.26 40.71 3.16
695 4584 5.221501 GCGGTAGGTATATAAACCCAACAGA 60.222 44.000 5.15 0.00 40.71 3.41
696 4585 6.453092 CGGTAGGTATATAAACCCAACAGAG 58.547 44.000 5.15 0.00 40.71 3.35
697 4586 6.041296 CGGTAGGTATATAAACCCAACAGAGT 59.959 42.308 5.15 0.00 40.71 3.24
698 4587 7.440198 GGTAGGTATATAAACCCAACAGAGTC 58.560 42.308 0.00 0.00 40.71 3.36
699 4588 7.289549 GGTAGGTATATAAACCCAACAGAGTCT 59.710 40.741 0.00 0.00 40.71 3.24
708 4597 5.632034 ACCCAACAGAGTCTTCTTACTTT 57.368 39.130 0.00 0.00 0.00 2.66
748 4638 6.344936 CGTTTCCGTTTCATTCATTCAGTTTG 60.345 38.462 0.00 0.00 0.00 2.93
779 4669 2.445845 CCCACGCCCCCTCTCATA 60.446 66.667 0.00 0.00 0.00 2.15
808 4698 1.277557 ACTTCTCAACTGCCTGCCTAG 59.722 52.381 0.00 0.00 0.00 3.02
809 4699 1.277557 CTTCTCAACTGCCTGCCTAGT 59.722 52.381 0.00 0.00 0.00 2.57
810 4700 0.610174 TCTCAACTGCCTGCCTAGTG 59.390 55.000 0.00 0.00 0.00 2.74
811 4701 1.003355 TCAACTGCCTGCCTAGTGC 60.003 57.895 0.00 0.00 41.77 4.40
812 4702 2.042831 CAACTGCCTGCCTAGTGCC 61.043 63.158 1.42 0.00 40.16 5.01
813 4703 2.227036 AACTGCCTGCCTAGTGCCT 61.227 57.895 1.42 0.00 40.16 4.75
814 4704 0.909610 AACTGCCTGCCTAGTGCCTA 60.910 55.000 1.42 0.00 40.16 3.93
855 4745 2.368011 GGTTTCTCCTCCCTCCCCG 61.368 68.421 0.00 0.00 0.00 5.73
856 4746 1.305887 GTTTCTCCTCCCTCCCCGA 60.306 63.158 0.00 0.00 0.00 5.14
859 4749 4.862823 CTCCTCCCTCCCCGACCC 62.863 77.778 0.00 0.00 0.00 4.46
862 4752 4.862823 CTCCCTCCCCGACCCTCC 62.863 77.778 0.00 0.00 0.00 4.30
961 4851 3.430497 TCCTCCCTCCCTCCCTCG 61.430 72.222 0.00 0.00 0.00 4.63
1029 4936 4.796495 GGCCCCGACATCCACCAC 62.796 72.222 0.00 0.00 0.00 4.16
1034 4941 1.553690 CCCGACATCCACCACCTCTT 61.554 60.000 0.00 0.00 0.00 2.85
1037 4944 0.253327 GACATCCACCACCTCTTCCC 59.747 60.000 0.00 0.00 0.00 3.97
1060 4973 4.671590 TCCTCTCCGGCCACGACA 62.672 66.667 2.24 0.00 44.60 4.35
1070 4983 2.631428 CCACGACAACGCCAACAG 59.369 61.111 0.00 0.00 43.96 3.16
1072 4985 1.275657 CACGACAACGCCAACAGAC 59.724 57.895 0.00 0.00 43.96 3.51
1107 5020 3.812019 CACCCGACTCCGACTCCG 61.812 72.222 0.00 0.00 38.22 4.63
1108 5021 4.025858 ACCCGACTCCGACTCCGA 62.026 66.667 0.00 0.00 38.22 4.55
1109 5022 3.507009 CCCGACTCCGACTCCGAC 61.507 72.222 0.00 0.00 38.22 4.79
1110 5023 2.436292 CCGACTCCGACTCCGACT 60.436 66.667 0.00 0.00 38.22 4.18
1111 5024 2.462782 CCGACTCCGACTCCGACTC 61.463 68.421 0.00 0.00 38.22 3.36
1112 5025 2.462782 CGACTCCGACTCCGACTCC 61.463 68.421 0.00 0.00 38.22 3.85
1113 5026 2.436292 ACTCCGACTCCGACTCCG 60.436 66.667 0.00 0.00 38.22 4.63
1114 5027 2.125229 CTCCGACTCCGACTCCGA 60.125 66.667 0.00 0.00 38.22 4.55
1115 5028 2.435586 TCCGACTCCGACTCCGAC 60.436 66.667 0.00 0.00 38.22 4.79
1244 5202 4.838152 GGGCTCGCCGATGCTTGA 62.838 66.667 1.24 0.00 36.85 3.02
1312 5282 4.519437 CGCTGGCGCTGATGAGGA 62.519 66.667 7.64 0.00 0.00 3.71
1313 5283 2.110627 GCTGGCGCTGATGAGGAT 59.889 61.111 7.64 0.00 0.00 3.24
1314 5284 2.252346 GCTGGCGCTGATGAGGATG 61.252 63.158 7.64 0.00 0.00 3.51
1315 5285 1.444672 CTGGCGCTGATGAGGATGA 59.555 57.895 7.64 0.00 0.00 2.92
1316 5286 0.600518 CTGGCGCTGATGAGGATGAG 60.601 60.000 7.64 0.00 0.00 2.90
1391 5364 4.796495 GCCGCCGGATTTCCTGGT 62.796 66.667 7.68 0.00 33.95 4.00
1392 5365 2.513897 CCGCCGGATTTCCTGGTC 60.514 66.667 5.05 0.00 33.95 4.02
1479 5452 2.273179 CCAGTCGTCCTCCGGTTCA 61.273 63.158 0.00 0.00 37.11 3.18
1513 5486 3.541713 CCCAGGCGAGGGCTACTC 61.542 72.222 5.11 0.00 43.10 2.59
1651 5648 1.302993 GTGTACCAACCGGCCATGT 60.303 57.895 0.00 0.00 34.57 3.21
1751 5748 1.679305 GAGCCACTGACTCTCCGGA 60.679 63.158 2.93 2.93 0.00 5.14
1752 5749 1.939769 GAGCCACTGACTCTCCGGAC 61.940 65.000 0.00 0.00 0.00 4.79
1753 5750 2.276116 GCCACTGACTCTCCGGACA 61.276 63.158 0.00 0.00 0.00 4.02
1814 5811 2.341101 AAGACGCATCCCTCGACGT 61.341 57.895 0.00 0.00 42.27 4.34
1941 5938 2.348998 CTGCTGTTCCGAGGCCTT 59.651 61.111 6.77 0.00 0.00 4.35
2029 6060 3.694072 CCTCTGTTTTGAGTGACACCAAA 59.306 43.478 14.47 14.47 32.50 3.28
2044 6075 5.584649 TGACACCAAAACTTTACTGACTCTG 59.415 40.000 0.00 0.00 0.00 3.35
2097 6132 2.644992 GTTTGCCGGCCAAGACAG 59.355 61.111 26.77 0.00 34.34 3.51
2119 6154 3.254166 GTGTCATCAAGTGCCTCAACATT 59.746 43.478 0.00 0.00 0.00 2.71
2133 6168 0.322816 AACATTGCATCTGGGCTCGT 60.323 50.000 0.00 0.00 34.04 4.18
2206 6245 2.356741 GGAGGTATTTGGGCACTTGCTA 60.357 50.000 0.38 0.00 41.70 3.49
2209 6248 2.362077 GGTATTTGGGCACTTGCTATGG 59.638 50.000 0.38 0.00 41.70 2.74
2326 6367 4.301628 CAGCCTTGATCAAGTTTTTGTCC 58.698 43.478 29.03 10.27 36.72 4.02
2354 6395 3.269178 CAGAAGAAGGAAGCTGCTAAGG 58.731 50.000 0.90 0.00 0.00 2.69
2384 6425 1.344114 TGGGGCAAGAAAAATCTGCAC 59.656 47.619 0.00 0.00 0.00 4.57
2388 6429 3.119352 GGGCAAGAAAAATCTGCACTAGG 60.119 47.826 0.00 0.00 0.00 3.02
2428 6486 4.025040 TGCAATGTCCTTCTGAATGTCT 57.975 40.909 0.00 0.00 0.00 3.41
2444 6502 7.987458 TCTGAATGTCTTGTTTACAGAACTCTT 59.013 33.333 0.00 0.00 31.51 2.85
2477 6535 8.477419 AGATTGGTCTGAAACATTTTAAGGAA 57.523 30.769 0.00 0.00 32.13 3.36
2521 6579 6.811665 CCGAATGTCATGTTTACAGAACTCTA 59.188 38.462 0.00 0.00 0.00 2.43
2522 6580 7.009631 CCGAATGTCATGTTTACAGAACTCTAG 59.990 40.741 0.00 0.00 0.00 2.43
2557 6616 8.925161 TTGGTCTGAAACATTTTAAGAACAAG 57.075 30.769 11.10 0.00 36.64 3.16
2560 6619 9.237846 GGTCTGAAACATTTTAAGAACAAGAAG 57.762 33.333 0.00 0.00 0.00 2.85
2562 6621 8.413229 TCTGAAACATTTTAAGAACAAGAAGGG 58.587 33.333 0.00 0.00 0.00 3.95
2563 6622 8.073467 TGAAACATTTTAAGAACAAGAAGGGT 57.927 30.769 0.00 0.00 0.00 4.34
2564 6623 9.191479 TGAAACATTTTAAGAACAAGAAGGGTA 57.809 29.630 0.00 0.00 0.00 3.69
2565 6624 9.678941 GAAACATTTTAAGAACAAGAAGGGTAG 57.321 33.333 0.00 0.00 0.00 3.18
2591 6651 4.670896 TGAGCTCCAATCGAACATATGA 57.329 40.909 12.15 0.00 0.00 2.15
2611 6671 4.318332 TGATGATGTTCACAGGTTCAGTC 58.682 43.478 0.00 0.00 0.00 3.51
2637 6697 9.950680 CTTGTTTGACTGAACTTGTACAATTAT 57.049 29.630 9.13 0.00 0.00 1.28
2667 6727 2.233676 TCGCAGGAGAGCTGTAAATTGA 59.766 45.455 0.00 0.00 0.00 2.57
2676 6736 8.540388 AGGAGAGCTGTAAATTGAAACATAGTA 58.460 33.333 0.00 0.00 0.00 1.82
2789 6849 3.761897 TGTTAATGTCCCAACCTTCCTG 58.238 45.455 0.00 0.00 0.00 3.86
2815 6875 7.905604 TTTCCGCCTGACTGAATATATATTG 57.094 36.000 12.74 2.34 0.00 1.90
2849 6909 7.553760 GGCAATATTGGAAGGAATGAAAATTGT 59.446 33.333 17.02 0.00 0.00 2.71
2863 6923 7.649533 ATGAAAATTGTTCTGATATGAGCCA 57.350 32.000 0.00 0.00 0.00 4.75
2876 6936 8.049117 TCTGATATGAGCCAGTCTTTACAAATT 58.951 33.333 0.00 0.00 0.00 1.82
3107 7203 4.702131 ACCACATATCACTTCTTTTGAGGC 59.298 41.667 0.00 0.00 0.00 4.70
3109 7205 5.065731 CCACATATCACTTCTTTTGAGGCTC 59.934 44.000 7.79 7.79 0.00 4.70
3110 7206 5.645067 CACATATCACTTCTTTTGAGGCTCA 59.355 40.000 14.43 14.43 0.00 4.26
3111 7207 5.645497 ACATATCACTTCTTTTGAGGCTCAC 59.355 40.000 18.55 0.00 0.00 3.51
3195 7292 6.098017 CCACTTAACTCCTCTTTAGTTACCG 58.902 44.000 0.00 0.00 38.74 4.02
3206 7303 9.158233 TCCTCTTTAGTTACCGAAAATAATGTG 57.842 33.333 0.00 0.00 28.52 3.21
3314 7496 1.134965 CCAGCGTTTCTCTAGTCCTGG 60.135 57.143 0.00 0.00 33.27 4.45
3315 7497 1.546476 CAGCGTTTCTCTAGTCCTGGT 59.454 52.381 0.00 0.00 0.00 4.00
3324 7507 2.303022 CTCTAGTCCTGGTGCCTTTGAA 59.697 50.000 0.00 0.00 0.00 2.69
3404 7591 7.441458 AGTGCTAAAGACATTATTCGGGATAAC 59.559 37.037 0.00 0.00 33.20 1.89
3460 7647 2.849294 ACAGGAGAGGTCTGCTTTTC 57.151 50.000 0.00 0.00 42.19 2.29
3517 7708 5.121221 ACTAATTTGCTGGGTCTTTTTCG 57.879 39.130 0.00 0.00 0.00 3.46
3525 7716 2.884639 CTGGGTCTTTTTCGTGGACATT 59.115 45.455 0.00 0.00 0.00 2.71
3554 7745 9.121517 CATTTGCAGTAGTTAAGTGATTTCTTG 57.878 33.333 0.00 0.00 0.00 3.02
3559 7750 8.504005 GCAGTAGTTAAGTGATTTCTTGCTTAA 58.496 33.333 0.00 0.00 32.90 1.85
3564 7755 8.515414 AGTTAAGTGATTTCTTGCTTAATGTCC 58.485 33.333 0.00 0.00 36.31 4.02
3565 7756 6.899393 AAGTGATTTCTTGCTTAATGTCCA 57.101 33.333 0.00 0.00 0.00 4.02
3567 7758 7.093322 AGTGATTTCTTGCTTAATGTCCATC 57.907 36.000 0.00 0.00 0.00 3.51
3568 7759 6.096001 AGTGATTTCTTGCTTAATGTCCATCC 59.904 38.462 0.00 0.00 0.00 3.51
3569 7760 5.951148 TGATTTCTTGCTTAATGTCCATCCA 59.049 36.000 0.00 0.00 0.00 3.41
3570 7761 6.436847 TGATTTCTTGCTTAATGTCCATCCAA 59.563 34.615 0.00 0.00 0.00 3.53
3571 7762 6.855763 TTTCTTGCTTAATGTCCATCCAAT 57.144 33.333 0.00 0.00 0.00 3.16
3572 7763 7.953005 TTTCTTGCTTAATGTCCATCCAATA 57.047 32.000 0.00 0.00 0.00 1.90
3574 7765 7.572523 TCTTGCTTAATGTCCATCCAATAAG 57.427 36.000 0.00 0.00 33.08 1.73
3575 7766 7.345691 TCTTGCTTAATGTCCATCCAATAAGA 58.654 34.615 0.00 0.00 32.08 2.10
3577 7768 8.537728 TTGCTTAATGTCCATCCAATAAGATT 57.462 30.769 0.00 0.00 32.08 2.40
3579 7770 9.066892 TGCTTAATGTCCATCCAATAAGATTAC 57.933 33.333 0.00 0.00 32.08 1.89
3582 7773 9.913310 TTAATGTCCATCCAATAAGATTACACA 57.087 29.630 0.00 0.00 0.00 3.72
3585 7776 7.047891 TGTCCATCCAATAAGATTACACAGTC 58.952 38.462 0.00 0.00 0.00 3.51
3590 7781 7.320443 TCCAATAAGATTACACAGTCATTGC 57.680 36.000 0.00 0.00 0.00 3.56
3592 7783 7.392953 TCCAATAAGATTACACAGTCATTGCAA 59.607 33.333 0.00 0.00 0.00 4.08
3593 7784 8.192774 CCAATAAGATTACACAGTCATTGCAAT 58.807 33.333 5.99 5.99 0.00 3.56
3594 7785 9.577110 CAATAAGATTACACAGTCATTGCAATT 57.423 29.630 9.83 0.00 0.00 2.32
3598 7789 9.793252 AAGATTACACAGTCATTGCAATTTATC 57.207 29.630 9.83 2.82 0.00 1.75
3599 7790 9.182214 AGATTACACAGTCATTGCAATTTATCT 57.818 29.630 9.83 5.09 0.00 1.98
3600 7791 9.793252 GATTACACAGTCATTGCAATTTATCTT 57.207 29.630 9.83 0.00 0.00 2.40
3602 7793 7.878477 ACACAGTCATTGCAATTTATCTTTG 57.122 32.000 9.83 10.79 0.00 2.77
3615 7806 9.977762 GCAATTTATCTTTGCTAGGAATTTTTG 57.022 29.630 0.00 0.00 44.71 2.44
3620 7811 9.874205 TTATCTTTGCTAGGAATTTTTGGATTG 57.126 29.630 0.00 0.00 0.00 2.67
3621 7812 7.301868 TCTTTGCTAGGAATTTTTGGATTGT 57.698 32.000 0.00 0.00 0.00 2.71
3622 7813 7.734942 TCTTTGCTAGGAATTTTTGGATTGTT 58.265 30.769 0.00 0.00 0.00 2.83
3623 7814 8.210265 TCTTTGCTAGGAATTTTTGGATTGTTT 58.790 29.630 0.00 0.00 0.00 2.83
3624 7815 7.961325 TTGCTAGGAATTTTTGGATTGTTTC 57.039 32.000 0.00 0.00 0.00 2.78
3625 7816 7.301868 TGCTAGGAATTTTTGGATTGTTTCT 57.698 32.000 0.00 0.00 0.00 2.52
3626 7817 7.153985 TGCTAGGAATTTTTGGATTGTTTCTG 58.846 34.615 0.00 0.00 0.00 3.02
3627 7818 6.591448 GCTAGGAATTTTTGGATTGTTTCTGG 59.409 38.462 0.00 0.00 0.00 3.86
3628 7819 6.499106 AGGAATTTTTGGATTGTTTCTGGT 57.501 33.333 0.00 0.00 0.00 4.00
3629 7820 7.610580 AGGAATTTTTGGATTGTTTCTGGTA 57.389 32.000 0.00 0.00 0.00 3.25
3630 7821 8.206126 AGGAATTTTTGGATTGTTTCTGGTAT 57.794 30.769 0.00 0.00 0.00 2.73
3631 7822 9.320295 AGGAATTTTTGGATTGTTTCTGGTATA 57.680 29.630 0.00 0.00 0.00 1.47
3632 7823 9.936759 GGAATTTTTGGATTGTTTCTGGTATAA 57.063 29.630 0.00 0.00 0.00 0.98
3685 7876 8.752187 AGCATACATGTGGAATTGTCTATTTTT 58.248 29.630 9.11 0.00 0.00 1.94
3686 7877 8.810427 GCATACATGTGGAATTGTCTATTTTTG 58.190 33.333 9.11 0.00 0.00 2.44
3710 7901 1.527034 GTGTTGAGGCTTGATGCTGA 58.473 50.000 0.00 0.00 42.39 4.26
3719 7910 2.621998 GGCTTGATGCTGATGTGCTTAT 59.378 45.455 0.00 0.00 42.39 1.73
3720 7911 3.067742 GGCTTGATGCTGATGTGCTTATT 59.932 43.478 0.00 0.00 42.39 1.40
3721 7912 4.441079 GGCTTGATGCTGATGTGCTTATTT 60.441 41.667 0.00 0.00 42.39 1.40
3722 7913 4.738740 GCTTGATGCTGATGTGCTTATTTC 59.261 41.667 0.00 0.00 38.95 2.17
3723 7914 5.677852 GCTTGATGCTGATGTGCTTATTTCA 60.678 40.000 0.00 0.00 38.95 2.69
3724 7915 6.459670 TTGATGCTGATGTGCTTATTTCAT 57.540 33.333 0.00 0.00 0.00 2.57
3725 7916 6.068473 TGATGCTGATGTGCTTATTTCATC 57.932 37.500 0.00 0.00 38.57 2.92
3726 7917 5.591067 TGATGCTGATGTGCTTATTTCATCA 59.409 36.000 6.84 6.84 43.36 3.07
3727 7918 6.264518 TGATGCTGATGTGCTTATTTCATCAT 59.735 34.615 7.38 0.00 44.11 2.45
3728 7919 5.827666 TGCTGATGTGCTTATTTCATCATG 58.172 37.500 7.38 0.00 44.11 3.07
3729 7920 5.220381 GCTGATGTGCTTATTTCATCATGG 58.780 41.667 7.38 0.18 44.11 3.66
3731 7922 6.682113 GCTGATGTGCTTATTTCATCATGGTT 60.682 38.462 7.38 0.00 44.11 3.67
3732 7923 7.172868 TGATGTGCTTATTTCATCATGGTTT 57.827 32.000 0.00 0.00 41.59 3.27
3733 7924 8.291191 TGATGTGCTTATTTCATCATGGTTTA 57.709 30.769 0.00 0.00 41.59 2.01
3734 7925 8.916062 TGATGTGCTTATTTCATCATGGTTTAT 58.084 29.630 0.00 0.00 41.59 1.40
3735 7926 9.754382 GATGTGCTTATTTCATCATGGTTTATT 57.246 29.630 0.00 0.00 38.15 1.40
3746 7937 9.699410 TTCATCATGGTTTATTATTCTCCTTGT 57.301 29.630 0.00 0.00 0.00 3.16
3859 8051 9.282247 CTATGCAGAACAAGTAAATCATCAAAC 57.718 33.333 0.00 0.00 0.00 2.93
3861 8053 7.660112 TGCAGAACAAGTAAATCATCAAACAT 58.340 30.769 0.00 0.00 0.00 2.71
3880 8073 4.621068 CATTTGAATGTGTACGCTCCAT 57.379 40.909 8.10 0.00 0.00 3.41
3909 8103 4.537936 AAACTCTGAAACTGAAAGCGAC 57.462 40.909 0.00 0.00 37.60 5.19
3911 8105 3.733337 ACTCTGAAACTGAAAGCGACAT 58.267 40.909 0.00 0.00 37.60 3.06
3912 8106 3.496130 ACTCTGAAACTGAAAGCGACATG 59.504 43.478 0.00 0.00 37.60 3.21
3913 8107 3.727726 TCTGAAACTGAAAGCGACATGA 58.272 40.909 0.00 0.00 37.60 3.07
3924 8121 0.523072 GCGACATGATTTGCCTGTGT 59.477 50.000 0.00 0.00 0.00 3.72
3933 8130 6.714810 ACATGATTTGCCTGTGTAGAGTAAAA 59.285 34.615 0.00 0.00 0.00 1.52
3937 8134 5.546621 TTGCCTGTGTAGAGTAAAAGACT 57.453 39.130 0.00 0.00 42.90 3.24
3943 8140 4.101898 TGTGTAGAGTAAAAGACTTGGCCA 59.898 41.667 0.00 0.00 39.06 5.36
3991 8188 0.902531 TGAAGAATGGGAGGACGTCC 59.097 55.000 27.67 27.67 46.10 4.79
4019 8219 2.505557 CGACGCACCGGTAACTCC 60.506 66.667 6.87 0.00 0.00 3.85
4022 8222 2.807895 CGCACCGGTAACTCCACG 60.808 66.667 6.87 0.00 35.57 4.94
4024 8224 2.340809 CACCGGTAACTCCACGCA 59.659 61.111 6.87 0.00 35.57 5.24
4026 8231 2.205152 ACCGGTAACTCCACGCACT 61.205 57.895 4.49 0.00 35.57 4.40
4040 8246 1.237285 CGCACTTTACTGCCCTGCTT 61.237 55.000 0.00 0.00 33.18 3.91
4044 8250 2.421424 CACTTTACTGCCCTGCTTGATC 59.579 50.000 0.00 0.00 0.00 2.92
4045 8251 2.307098 ACTTTACTGCCCTGCTTGATCT 59.693 45.455 0.00 0.00 0.00 2.75
4054 8260 3.336468 CCCTGCTTGATCTGCATCTATC 58.664 50.000 12.85 0.00 39.86 2.08
4059 8265 4.587684 TGCTTGATCTGCATCTATCTCTGA 59.412 41.667 9.33 0.00 35.31 3.27
4064 8270 4.915158 TCTGCATCTATCTCTGACTGTG 57.085 45.455 0.00 0.00 0.00 3.66
4084 8290 7.106239 ACTGTGATTTTTCATCCGATCTTACT 58.894 34.615 0.00 0.00 0.00 2.24
4085 8291 7.278868 ACTGTGATTTTTCATCCGATCTTACTC 59.721 37.037 0.00 0.00 0.00 2.59
4086 8292 6.538742 TGTGATTTTTCATCCGATCTTACTCC 59.461 38.462 0.00 0.00 0.00 3.85
4087 8293 6.763610 GTGATTTTTCATCCGATCTTACTCCT 59.236 38.462 0.00 0.00 0.00 3.69
4088 8294 7.926555 GTGATTTTTCATCCGATCTTACTCCTA 59.073 37.037 0.00 0.00 0.00 2.94
4089 8295 7.926555 TGATTTTTCATCCGATCTTACTCCTAC 59.073 37.037 0.00 0.00 0.00 3.18
4090 8296 6.785337 TTTTCATCCGATCTTACTCCTACA 57.215 37.500 0.00 0.00 0.00 2.74
4091 8297 6.978674 TTTCATCCGATCTTACTCCTACAT 57.021 37.500 0.00 0.00 0.00 2.29
4092 8298 8.473358 TTTTCATCCGATCTTACTCCTACATA 57.527 34.615 0.00 0.00 0.00 2.29
4093 8299 8.651589 TTTCATCCGATCTTACTCCTACATAT 57.348 34.615 0.00 0.00 0.00 1.78
4115 8321 1.815003 CCTTGTTTCCTCTGCATGGAC 59.185 52.381 7.95 0.62 32.65 4.02
4140 8346 1.065636 CAATTCAGCAGGCTGGAGAGA 60.066 52.381 20.19 0.00 43.75 3.10
4151 8357 0.035725 CTGGAGAGAATGCTGCCACA 60.036 55.000 0.00 0.00 0.00 4.17
4188 8400 1.466360 CGCTTTGAAATGGCTCTTCCG 60.466 52.381 0.00 0.00 37.80 4.30
4192 8404 2.859165 TGAAATGGCTCTTCCGAAGT 57.141 45.000 8.01 0.00 37.80 3.01
4196 8408 0.392193 ATGGCTCTTCCGAAGTGCTG 60.392 55.000 26.22 10.39 44.93 4.41
4206 8418 4.299547 AAGTGCTGCTCGCCGTCA 62.300 61.111 0.00 0.00 38.05 4.35
4221 8433 0.315382 CGTCATTTTCTCGCCATCGC 60.315 55.000 0.00 0.00 35.26 4.58
4224 8436 2.802816 GTCATTTTCTCGCCATCGCTAT 59.197 45.455 0.00 0.00 35.26 2.97
4227 8439 4.447724 TCATTTTCTCGCCATCGCTATAAC 59.552 41.667 0.00 0.00 35.26 1.89
4230 8442 3.217599 TCTCGCCATCGCTATAACATC 57.782 47.619 0.00 0.00 35.26 3.06
4245 8457 0.391228 ACATCGTGTGCCAGTGTACA 59.609 50.000 0.00 0.00 34.49 2.90
4246 8458 1.001974 ACATCGTGTGCCAGTGTACAT 59.998 47.619 0.00 0.00 39.36 2.29
4275 8487 3.883489 GCCCTGTACAGACATTAATTCCC 59.117 47.826 24.68 0.00 34.24 3.97
4276 8488 4.627741 GCCCTGTACAGACATTAATTCCCA 60.628 45.833 24.68 0.00 34.24 4.37
4277 8489 5.694995 CCCTGTACAGACATTAATTCCCAT 58.305 41.667 24.68 0.00 34.24 4.00
4278 8490 6.129179 CCCTGTACAGACATTAATTCCCATT 58.871 40.000 24.68 0.00 34.24 3.16
4279 8491 6.607198 CCCTGTACAGACATTAATTCCCATTT 59.393 38.462 24.68 0.00 34.24 2.32
4280 8492 7.201821 CCCTGTACAGACATTAATTCCCATTTC 60.202 40.741 24.68 0.00 34.24 2.17
4310 8522 5.348997 GTGATGACTAGGTTGAGTTTACAGC 59.651 44.000 0.00 0.00 0.00 4.40
4327 8539 2.565834 ACAGCGACATTAGTTAGGTGGT 59.434 45.455 0.00 0.00 38.00 4.16
4328 8540 3.007614 ACAGCGACATTAGTTAGGTGGTT 59.992 43.478 0.00 0.00 38.00 3.67
4329 8541 4.221262 ACAGCGACATTAGTTAGGTGGTTA 59.779 41.667 0.00 0.00 38.00 2.85
4330 8542 5.172934 CAGCGACATTAGTTAGGTGGTTAA 58.827 41.667 0.00 0.00 33.53 2.01
4351 8563 7.177392 GGTTAATTAAGCATGGATAAGGCTCAT 59.823 37.037 19.87 0.00 36.76 2.90
4360 8572 3.080319 GGATAAGGCTCATCCATGCTTC 58.920 50.000 12.07 0.00 41.48 3.86
4361 8573 2.645838 TAAGGCTCATCCATGCTTCC 57.354 50.000 0.00 0.00 37.29 3.46
4378 8590 1.757682 TCCGTTTTTGCTTCCACACT 58.242 45.000 0.00 0.00 0.00 3.55
4389 8602 2.746472 GCTTCCACACTGTGAAACTCCT 60.746 50.000 15.86 0.00 38.04 3.69
4399 8612 6.093633 ACACTGTGAAACTCCTTTTGAACTAC 59.906 38.462 15.86 0.00 38.04 2.73
4553 8766 5.473796 CAGCTTCAAAATTTTGTTGCTGT 57.526 34.783 36.98 23.93 46.54 4.40
4585 8798 7.538303 AAAATCTTCGCAGTTTCAACAAATT 57.462 28.000 0.00 0.00 0.00 1.82
4589 8802 5.229052 TCTTCGCAGTTTCAACAAATTTTCG 59.771 36.000 0.00 0.00 0.00 3.46
4598 8811 8.940952 AGTTTCAACAAATTTTCGGAATTTCAA 58.059 25.926 7.24 0.00 0.00 2.69
4828 9056 9.548208 TGAATTTTCAAACAATTTCGTTTTTCC 57.452 25.926 0.00 0.00 36.98 3.13
4829 9057 8.903570 AATTTTCAAACAATTTCGTTTTTCCC 57.096 26.923 0.00 0.00 36.98 3.97
4831 9059 6.654793 TTCAAACAATTTCGTTTTTCCCTG 57.345 33.333 0.00 0.00 36.98 4.45
4833 9061 6.166982 TCAAACAATTTCGTTTTTCCCTGTT 58.833 32.000 0.00 0.00 36.98 3.16
4834 9062 7.321153 TCAAACAATTTCGTTTTTCCCTGTTA 58.679 30.769 0.00 0.00 36.98 2.41
4835 9063 7.275999 TCAAACAATTTCGTTTTTCCCTGTTAC 59.724 33.333 0.00 0.00 36.98 2.50
4847 9075 9.210329 GTTTTTCCCTGTTACTTTTTCTTTTCA 57.790 29.630 0.00 0.00 0.00 2.69
4848 9076 9.952030 TTTTTCCCTGTTACTTTTTCTTTTCAT 57.048 25.926 0.00 0.00 0.00 2.57
4852 9080 9.952030 TCCCTGTTACTTTTTCTTTTCATTTTT 57.048 25.926 0.00 0.00 0.00 1.94
4891 9119 9.761504 ATCACAAATGTCAAATAATGTTCAACA 57.238 25.926 0.00 0.00 0.00 3.33
4892 9120 9.761504 TCACAAATGTCAAATAATGTTCAACAT 57.238 25.926 0.00 0.00 41.31 2.71
4915 9143 4.208632 CAGCATGTTCGGAGTCCC 57.791 61.111 2.80 0.00 0.00 4.46
4916 9144 1.599047 CAGCATGTTCGGAGTCCCT 59.401 57.895 2.80 0.00 0.00 4.20
4917 9145 0.460987 CAGCATGTTCGGAGTCCCTC 60.461 60.000 2.80 0.00 0.00 4.30
4918 9146 1.153349 GCATGTTCGGAGTCCCTCC 60.153 63.158 2.80 0.00 46.44 4.30
4925 9153 2.979649 GGAGTCCCTCCGTTCCAC 59.020 66.667 0.00 0.00 41.08 4.02
4926 9154 2.657066 GGAGTCCCTCCGTTCCACC 61.657 68.421 0.00 0.00 41.08 4.61
4927 9155 1.911766 GAGTCCCTCCGTTCCACCA 60.912 63.158 0.00 0.00 0.00 4.17
4928 9156 1.889530 GAGTCCCTCCGTTCCACCAG 61.890 65.000 0.00 0.00 0.00 4.00
4929 9157 2.606519 TCCCTCCGTTCCACCAGG 60.607 66.667 0.00 0.00 0.00 4.45
4930 9158 4.410400 CCCTCCGTTCCACCAGGC 62.410 72.222 0.00 0.00 33.74 4.85
4931 9159 4.410400 CCTCCGTTCCACCAGGCC 62.410 72.222 0.00 0.00 33.74 5.19
4932 9160 3.636231 CTCCGTTCCACCAGGCCA 61.636 66.667 5.01 0.00 33.74 5.36
4933 9161 3.901797 CTCCGTTCCACCAGGCCAC 62.902 68.421 5.01 0.00 33.74 5.01
4934 9162 3.953775 CCGTTCCACCAGGCCACT 61.954 66.667 5.01 0.00 33.74 4.00
4935 9163 2.358737 CGTTCCACCAGGCCACTC 60.359 66.667 5.01 0.00 33.74 3.51
4936 9164 2.034221 GTTCCACCAGGCCACTCC 59.966 66.667 5.01 0.00 33.74 3.85
4937 9165 2.449518 TTCCACCAGGCCACTCCA 60.450 61.111 5.01 0.00 37.29 3.86
4938 9166 2.528818 TTCCACCAGGCCACTCCAG 61.529 63.158 5.01 0.00 37.29 3.86
4939 9167 4.039092 CCACCAGGCCACTCCAGG 62.039 72.222 5.01 0.00 46.33 4.45
4940 9168 2.930019 CACCAGGCCACTCCAGGA 60.930 66.667 5.01 0.00 43.84 3.86
4941 9169 2.608988 ACCAGGCCACTCCAGGAG 60.609 66.667 15.72 15.72 43.84 3.69
4942 9170 4.106925 CCAGGCCACTCCAGGAGC 62.107 72.222 17.31 3.22 43.84 4.70
4943 9171 3.007920 CAGGCCACTCCAGGAGCT 61.008 66.667 17.31 2.22 37.29 4.09
4944 9172 3.007920 AGGCCACTCCAGGAGCTG 61.008 66.667 17.31 13.26 37.29 4.24
4945 9173 3.005539 GGCCACTCCAGGAGCTGA 61.006 66.667 17.31 0.00 32.44 4.26
4946 9174 2.373707 GGCCACTCCAGGAGCTGAT 61.374 63.158 17.31 0.00 32.44 2.90
4947 9175 1.153208 GCCACTCCAGGAGCTGATG 60.153 63.158 17.31 7.09 32.44 3.07
4948 9176 1.525923 CCACTCCAGGAGCTGATGG 59.474 63.158 17.31 12.65 37.97 3.51
4949 9177 0.979709 CCACTCCAGGAGCTGATGGA 60.980 60.000 17.31 14.31 43.34 3.41
4952 9180 3.406442 TCCAGGAGCTGATGGAGTT 57.594 52.632 11.63 0.00 40.70 3.01
4953 9181 1.198713 TCCAGGAGCTGATGGAGTTC 58.801 55.000 11.63 0.00 40.70 3.01
4954 9182 1.202330 CCAGGAGCTGATGGAGTTCT 58.798 55.000 7.89 0.00 39.02 3.01
4955 9183 2.023984 TCCAGGAGCTGATGGAGTTCTA 60.024 50.000 11.63 0.00 40.70 2.10
4956 9184 2.364970 CCAGGAGCTGATGGAGTTCTAG 59.635 54.545 7.89 0.00 39.02 2.43
4957 9185 3.030291 CAGGAGCTGATGGAGTTCTAGT 58.970 50.000 0.00 0.00 32.59 2.57
4958 9186 3.450457 CAGGAGCTGATGGAGTTCTAGTT 59.550 47.826 0.00 0.00 32.59 2.24
4959 9187 4.646945 CAGGAGCTGATGGAGTTCTAGTTA 59.353 45.833 0.00 0.00 32.59 2.24
4960 9188 5.127845 CAGGAGCTGATGGAGTTCTAGTTAA 59.872 44.000 0.00 0.00 32.59 2.01
4961 9189 5.721960 AGGAGCTGATGGAGTTCTAGTTAAA 59.278 40.000 0.00 0.00 32.59 1.52
4962 9190 6.213600 AGGAGCTGATGGAGTTCTAGTTAAAA 59.786 38.462 0.00 0.00 32.59 1.52
4963 9191 6.536941 GGAGCTGATGGAGTTCTAGTTAAAAG 59.463 42.308 0.00 0.00 32.59 2.27
4964 9192 5.877564 AGCTGATGGAGTTCTAGTTAAAAGC 59.122 40.000 0.00 0.00 0.00 3.51
4965 9193 5.877564 GCTGATGGAGTTCTAGTTAAAAGCT 59.122 40.000 0.00 0.00 0.00 3.74
4966 9194 6.183360 GCTGATGGAGTTCTAGTTAAAAGCTG 60.183 42.308 0.00 0.00 0.00 4.24
4967 9195 5.643777 TGATGGAGTTCTAGTTAAAAGCTGC 59.356 40.000 0.00 0.00 0.00 5.25
4968 9196 3.994392 TGGAGTTCTAGTTAAAAGCTGCG 59.006 43.478 0.00 0.00 0.00 5.18
4969 9197 3.371285 GGAGTTCTAGTTAAAAGCTGCGG 59.629 47.826 0.00 0.00 0.00 5.69
4970 9198 4.243270 GAGTTCTAGTTAAAAGCTGCGGA 58.757 43.478 0.00 0.00 0.00 5.54
4971 9199 4.246458 AGTTCTAGTTAAAAGCTGCGGAG 58.754 43.478 0.00 0.00 0.00 4.63
4984 9212 2.282462 CGGAGCCAGCCAAAAGGT 60.282 61.111 0.00 0.00 0.00 3.50
4985 9213 1.002624 CGGAGCCAGCCAAAAGGTA 60.003 57.895 0.00 0.00 0.00 3.08
4986 9214 1.305930 CGGAGCCAGCCAAAAGGTAC 61.306 60.000 0.00 0.00 0.00 3.34
4988 9216 1.454201 GAGCCAGCCAAAAGGTACTC 58.546 55.000 0.00 0.00 38.49 2.59
4989 9217 0.038310 AGCCAGCCAAAAGGTACTCC 59.962 55.000 0.00 0.00 38.49 3.85
4990 9218 1.305930 GCCAGCCAAAAGGTACTCCG 61.306 60.000 0.00 0.00 38.49 4.63
4991 9219 1.305930 CCAGCCAAAAGGTACTCCGC 61.306 60.000 0.00 0.00 38.49 5.54
4992 9220 0.605319 CAGCCAAAAGGTACTCCGCA 60.605 55.000 0.00 0.00 38.49 5.69
4993 9221 0.321653 AGCCAAAAGGTACTCCGCAG 60.322 55.000 0.00 0.00 38.49 5.18
4994 9222 0.321298 GCCAAAAGGTACTCCGCAGA 60.321 55.000 0.00 0.00 38.49 4.26
4995 9223 1.679032 GCCAAAAGGTACTCCGCAGAT 60.679 52.381 0.00 0.00 38.49 2.90
4996 9224 2.711542 CCAAAAGGTACTCCGCAGATT 58.288 47.619 0.00 0.00 38.49 2.40
4997 9225 2.678336 CCAAAAGGTACTCCGCAGATTC 59.322 50.000 0.00 0.00 38.49 2.52
4998 9226 3.600388 CAAAAGGTACTCCGCAGATTCT 58.400 45.455 0.00 0.00 38.49 2.40
4999 9227 3.983044 AAAGGTACTCCGCAGATTCTT 57.017 42.857 0.00 0.00 38.49 2.52
5000 9228 3.528597 AAGGTACTCCGCAGATTCTTC 57.471 47.619 0.00 0.00 38.49 2.87
5001 9229 2.457598 AGGTACTCCGCAGATTCTTCA 58.542 47.619 0.00 0.00 39.05 3.02
5002 9230 2.832129 AGGTACTCCGCAGATTCTTCAA 59.168 45.455 0.00 0.00 39.05 2.69
5003 9231 3.452627 AGGTACTCCGCAGATTCTTCAAT 59.547 43.478 0.00 0.00 39.05 2.57
5004 9232 4.080863 AGGTACTCCGCAGATTCTTCAATT 60.081 41.667 0.00 0.00 39.05 2.32
5005 9233 4.271291 GGTACTCCGCAGATTCTTCAATTC 59.729 45.833 0.00 0.00 0.00 2.17
5006 9234 4.213564 ACTCCGCAGATTCTTCAATTCT 57.786 40.909 0.00 0.00 0.00 2.40
5007 9235 5.344743 ACTCCGCAGATTCTTCAATTCTA 57.655 39.130 0.00 0.00 0.00 2.10
5008 9236 5.112686 ACTCCGCAGATTCTTCAATTCTAC 58.887 41.667 0.00 0.00 0.00 2.59
5009 9237 4.112634 TCCGCAGATTCTTCAATTCTACG 58.887 43.478 0.00 0.00 0.00 3.51
5010 9238 3.246226 CCGCAGATTCTTCAATTCTACGG 59.754 47.826 0.00 0.00 0.00 4.02
5011 9239 4.112634 CGCAGATTCTTCAATTCTACGGA 58.887 43.478 0.00 0.00 0.00 4.69
5012 9240 4.208047 CGCAGATTCTTCAATTCTACGGAG 59.792 45.833 0.00 0.00 0.00 4.63
5014 9242 5.006165 GCAGATTCTTCAATTCTACGGAGTG 59.994 44.000 0.00 0.00 45.73 3.51
5015 9243 5.521735 CAGATTCTTCAATTCTACGGAGTGG 59.478 44.000 0.00 0.00 45.73 4.00
5016 9244 3.887621 TCTTCAATTCTACGGAGTGGG 57.112 47.619 0.00 0.00 45.73 4.61
5017 9245 3.170717 TCTTCAATTCTACGGAGTGGGT 58.829 45.455 0.00 0.00 45.73 4.51
5018 9246 3.056107 TCTTCAATTCTACGGAGTGGGTG 60.056 47.826 0.00 0.00 45.73 4.61
5019 9247 1.553248 TCAATTCTACGGAGTGGGTGG 59.447 52.381 0.00 0.00 45.73 4.61
5020 9248 1.553248 CAATTCTACGGAGTGGGTGGA 59.447 52.381 0.00 0.00 45.73 4.02
5021 9249 1.192428 ATTCTACGGAGTGGGTGGAC 58.808 55.000 0.00 0.00 45.73 4.02
5022 9250 0.113776 TTCTACGGAGTGGGTGGACT 59.886 55.000 0.00 0.00 45.73 3.85
5023 9251 0.611062 TCTACGGAGTGGGTGGACTG 60.611 60.000 0.00 0.00 45.73 3.51
5024 9252 2.227089 CTACGGAGTGGGTGGACTGC 62.227 65.000 0.00 0.00 45.73 4.40
5025 9253 4.394712 CGGAGTGGGTGGACTGCC 62.395 72.222 0.00 0.00 30.86 4.85
5026 9254 4.394712 GGAGTGGGTGGACTGCCG 62.395 72.222 0.00 0.00 36.79 5.69
5027 9255 3.311110 GAGTGGGTGGACTGCCGA 61.311 66.667 0.00 0.00 36.79 5.54
5028 9256 2.847234 AGTGGGTGGACTGCCGAA 60.847 61.111 0.00 0.00 36.79 4.30
5029 9257 2.668550 GTGGGTGGACTGCCGAAC 60.669 66.667 0.00 0.00 36.79 3.95
5030 9258 3.164977 TGGGTGGACTGCCGAACA 61.165 61.111 0.00 0.00 36.79 3.18
5039 9267 3.532896 CTGCCGAACAGCTCCTAAA 57.467 52.632 0.00 0.00 40.19 1.85
5040 9268 1.808411 CTGCCGAACAGCTCCTAAAA 58.192 50.000 0.00 0.00 40.19 1.52
5041 9269 2.151202 CTGCCGAACAGCTCCTAAAAA 58.849 47.619 0.00 0.00 40.19 1.94
5042 9270 2.749621 CTGCCGAACAGCTCCTAAAAAT 59.250 45.455 0.00 0.00 40.19 1.82
5043 9271 2.487762 TGCCGAACAGCTCCTAAAAATG 59.512 45.455 0.00 0.00 0.00 2.32
5044 9272 2.488153 GCCGAACAGCTCCTAAAAATGT 59.512 45.455 0.00 0.00 0.00 2.71
5045 9273 3.057526 GCCGAACAGCTCCTAAAAATGTT 60.058 43.478 0.00 0.00 36.83 2.71
5046 9274 4.723248 CCGAACAGCTCCTAAAAATGTTC 58.277 43.478 6.35 6.35 43.90 3.18
5047 9275 4.215399 CCGAACAGCTCCTAAAAATGTTCA 59.785 41.667 14.53 0.00 46.34 3.18
5048 9276 5.106157 CCGAACAGCTCCTAAAAATGTTCAT 60.106 40.000 14.53 0.00 46.34 2.57
5049 9277 6.381801 CGAACAGCTCCTAAAAATGTTCATT 58.618 36.000 14.53 0.00 46.34 2.57
5050 9278 6.863126 CGAACAGCTCCTAAAAATGTTCATTT 59.137 34.615 14.53 5.12 46.34 2.32
5051 9279 7.382218 CGAACAGCTCCTAAAAATGTTCATTTT 59.618 33.333 15.08 15.08 46.34 1.82
5052 9280 8.962884 AACAGCTCCTAAAAATGTTCATTTTT 57.037 26.923 27.47 27.47 43.60 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 127 1.986882 AAGGCAGGTTTCAAGGACAG 58.013 50.000 0.00 0.00 0.00 3.51
255 800 6.271159 GGAGGAGACAAGAATATCCATAGGTT 59.729 42.308 0.00 0.00 34.08 3.50
341 960 4.766272 AGGAGCTCCTGCGACTAA 57.234 55.556 34.74 0.00 46.55 2.24
563 1182 2.586425 CCATCACTCAAACAACCCACT 58.414 47.619 0.00 0.00 0.00 4.00
624 1244 0.882042 GGATCCCTGCACGCACTATG 60.882 60.000 0.00 0.00 0.00 2.23
667 4556 4.772100 TGGGTTTATATACCTACCGCCTAC 59.228 45.833 11.56 0.00 38.30 3.18
668 4557 5.009436 TGGGTTTATATACCTACCGCCTA 57.991 43.478 11.56 0.00 38.30 3.93
669 4558 3.860607 TGGGTTTATATACCTACCGCCT 58.139 45.455 11.56 0.00 38.30 5.52
670 4559 4.202346 TGTTGGGTTTATATACCTACCGCC 60.202 45.833 11.56 0.00 38.30 6.13
671 4560 4.959723 TGTTGGGTTTATATACCTACCGC 58.040 43.478 11.56 1.25 38.30 5.68
672 4561 6.041296 ACTCTGTTGGGTTTATATACCTACCG 59.959 42.308 11.56 7.44 38.30 4.02
673 4562 7.289549 AGACTCTGTTGGGTTTATATACCTACC 59.710 40.741 11.56 0.00 38.30 3.18
674 4563 8.247666 AGACTCTGTTGGGTTTATATACCTAC 57.752 38.462 11.56 10.38 38.30 3.18
675 4564 8.849543 AAGACTCTGTTGGGTTTATATACCTA 57.150 34.615 11.56 3.49 38.30 3.08
676 4565 7.624077 AGAAGACTCTGTTGGGTTTATATACCT 59.376 37.037 11.56 0.00 38.30 3.08
677 4566 7.793036 AGAAGACTCTGTTGGGTTTATATACC 58.207 38.462 3.88 3.88 37.47 2.73
680 4569 9.047947 AGTAAGAAGACTCTGTTGGGTTTATAT 57.952 33.333 0.00 0.00 30.03 0.86
681 4570 8.431910 AGTAAGAAGACTCTGTTGGGTTTATA 57.568 34.615 0.00 0.00 30.03 0.98
682 4571 7.317722 AGTAAGAAGACTCTGTTGGGTTTAT 57.682 36.000 0.00 0.00 30.03 1.40
683 4572 6.742559 AGTAAGAAGACTCTGTTGGGTTTA 57.257 37.500 0.00 0.00 30.03 2.01
684 4573 5.632034 AGTAAGAAGACTCTGTTGGGTTT 57.368 39.130 0.00 0.00 30.03 3.27
685 4574 5.632034 AAGTAAGAAGACTCTGTTGGGTT 57.368 39.130 0.00 0.00 30.03 4.11
686 4575 5.632034 AAAGTAAGAAGACTCTGTTGGGT 57.368 39.130 0.00 0.00 30.03 4.51
687 4576 5.239525 CCAAAAGTAAGAAGACTCTGTTGGG 59.760 44.000 0.00 0.00 34.83 4.12
688 4577 5.239525 CCCAAAAGTAAGAAGACTCTGTTGG 59.760 44.000 6.12 6.12 36.48 3.77
689 4578 5.278022 GCCCAAAAGTAAGAAGACTCTGTTG 60.278 44.000 0.00 0.00 30.03 3.33
690 4579 4.822350 GCCCAAAAGTAAGAAGACTCTGTT 59.178 41.667 0.00 0.00 30.03 3.16
691 4580 4.103311 AGCCCAAAAGTAAGAAGACTCTGT 59.897 41.667 0.00 0.00 30.03 3.41
692 4581 4.646572 AGCCCAAAAGTAAGAAGACTCTG 58.353 43.478 0.00 0.00 30.03 3.35
693 4582 4.984146 AGCCCAAAAGTAAGAAGACTCT 57.016 40.909 0.00 0.00 0.00 3.24
694 4583 4.632251 GCTAGCCCAAAAGTAAGAAGACTC 59.368 45.833 2.29 0.00 0.00 3.36
695 4584 4.565861 GGCTAGCCCAAAAGTAAGAAGACT 60.566 45.833 24.19 0.00 0.00 3.24
696 4585 3.690139 GGCTAGCCCAAAAGTAAGAAGAC 59.310 47.826 24.19 0.00 0.00 3.01
697 4586 3.618997 CGGCTAGCCCAAAAGTAAGAAGA 60.619 47.826 28.09 0.00 0.00 2.87
698 4587 2.678336 CGGCTAGCCCAAAAGTAAGAAG 59.322 50.000 28.09 5.10 0.00 2.85
699 4588 2.039348 ACGGCTAGCCCAAAAGTAAGAA 59.961 45.455 28.09 0.00 0.00 2.52
704 4593 1.244816 GAAACGGCTAGCCCAAAAGT 58.755 50.000 28.09 16.42 0.00 2.66
708 4597 0.535553 AAACGAAACGGCTAGCCCAA 60.536 50.000 28.09 0.00 0.00 4.12
748 4638 1.674651 GTGGGGGAAGCGGTTTCTC 60.675 63.158 5.47 0.11 35.39 2.87
768 4658 4.166539 AGTTGAGATGATATGAGAGGGGG 58.833 47.826 0.00 0.00 0.00 5.40
770 4660 6.267242 TGAGAAGTTGAGATGATATGAGAGGG 59.733 42.308 0.00 0.00 0.00 4.30
779 4669 4.019501 AGGCAGTTGAGAAGTTGAGATGAT 60.020 41.667 0.00 0.00 0.00 2.45
808 4698 2.948134 GCGACGTAGCGTAGGCAC 60.948 66.667 10.48 5.21 41.37 5.01
832 4722 2.285144 GGGAGGAGAAACCCGGGA 60.285 66.667 32.02 0.00 40.05 5.14
865 4755 1.254284 ATCTCATCTCGATCGGGGGC 61.254 60.000 16.43 0.00 0.00 5.80
866 4756 0.814457 GATCTCATCTCGATCGGGGG 59.186 60.000 16.43 8.22 0.00 5.40
929 4819 1.882989 GAGGAGAGCGAGCAACAGGT 61.883 60.000 0.00 0.00 0.00 4.00
930 4820 1.153667 GAGGAGAGCGAGCAACAGG 60.154 63.158 0.00 0.00 0.00 4.00
933 4823 2.185608 GGGAGGAGAGCGAGCAAC 59.814 66.667 0.00 0.00 0.00 4.17
934 4824 2.038007 AGGGAGGAGAGCGAGCAA 59.962 61.111 0.00 0.00 0.00 3.91
935 4825 2.441164 GAGGGAGGAGAGCGAGCA 60.441 66.667 0.00 0.00 0.00 4.26
936 4826 3.223589 GGAGGGAGGAGAGCGAGC 61.224 72.222 0.00 0.00 0.00 5.03
961 4851 2.442458 GAGGGGAGGGGAGACGAC 60.442 72.222 0.00 0.00 0.00 4.34
1029 4936 3.080121 AGGAGCTGCGGGAAGAGG 61.080 66.667 0.00 0.00 0.00 3.69
1060 4973 1.598130 GCTGAGGTCTGTTGGCGTT 60.598 57.895 0.00 0.00 0.00 4.84
1065 4978 2.743928 GGCGGCTGAGGTCTGTTG 60.744 66.667 0.00 0.00 0.00 3.33
1070 4983 2.860972 GAAGAAGGGCGGCTGAGGTC 62.861 65.000 9.56 0.00 0.00 3.85
1072 4985 2.124942 GAAGAAGGGCGGCTGAGG 60.125 66.667 9.56 0.00 0.00 3.86
1107 5020 2.750637 TGCGGAGGAGTCGGAGTC 60.751 66.667 4.18 4.18 0.00 3.36
1108 5021 3.063084 GTGCGGAGGAGTCGGAGT 61.063 66.667 0.00 0.00 0.00 3.85
1109 5022 4.180946 CGTGCGGAGGAGTCGGAG 62.181 72.222 0.00 0.00 0.00 4.63
1130 5043 3.032339 CGACGTAGCTAGAGGCCC 58.968 66.667 0.00 0.00 43.05 5.80
1244 5202 4.988598 CCAGGAACGCGCTGTGGT 62.989 66.667 5.73 0.00 0.00 4.16
1282 5240 4.020617 CAGCGGGTCCTCCAAGCA 62.021 66.667 0.00 0.00 39.91 3.91
1311 5281 2.202623 AACTCGTCGCCGCTCATC 60.203 61.111 0.00 0.00 0.00 2.92
1312 5282 2.507102 CAACTCGTCGCCGCTCAT 60.507 61.111 0.00 0.00 0.00 2.90
1313 5283 3.610791 CTCAACTCGTCGCCGCTCA 62.611 63.158 0.00 0.00 0.00 4.26
1314 5284 2.876645 CTCAACTCGTCGCCGCTC 60.877 66.667 0.00 0.00 0.00 5.03
1372 5342 2.516930 CAGGAAATCCGGCGGCAT 60.517 61.111 23.83 13.10 42.08 4.40
1509 5482 2.104859 CGCCGGAGAGTCGTGAGTA 61.105 63.158 5.05 0.00 0.00 2.59
1682 5679 3.941657 GAGGGCGACTGGCTGTGTC 62.942 68.421 0.29 0.00 42.94 3.67
1683 5680 4.008933 GAGGGCGACTGGCTGTGT 62.009 66.667 0.29 0.00 42.94 3.72
1751 5748 2.892425 GCTGATAAGCGCCGCTGT 60.892 61.111 14.52 4.25 39.62 4.40
1752 5749 3.643978 GGCTGATAAGCGCCGCTG 61.644 66.667 14.52 0.00 39.62 5.18
1791 5788 2.045926 AGGGATGCGTCTTGTGGC 60.046 61.111 5.77 0.00 0.00 5.01
1792 5789 1.811266 CGAGGGATGCGTCTTGTGG 60.811 63.158 5.77 0.00 0.00 4.17
1793 5790 1.078759 GTCGAGGGATGCGTCTTGTG 61.079 60.000 5.77 0.00 0.00 3.33
1794 5791 1.215647 GTCGAGGGATGCGTCTTGT 59.784 57.895 5.77 0.00 0.00 3.16
1795 5792 1.874019 CGTCGAGGGATGCGTCTTG 60.874 63.158 5.77 0.00 0.00 3.02
1796 5793 2.341101 ACGTCGAGGGATGCGTCTT 61.341 57.895 10.27 0.00 31.54 3.01
1797 5794 2.750637 ACGTCGAGGGATGCGTCT 60.751 61.111 10.27 0.00 31.54 4.18
1798 5795 2.579787 CACGTCGAGGGATGCGTC 60.580 66.667 10.27 0.00 35.25 5.19
1799 5796 4.796231 GCACGTCGAGGGATGCGT 62.796 66.667 10.27 0.00 38.14 5.24
1985 6006 3.190327 GCTCTGCTCTGCTAATAGATCGA 59.810 47.826 0.00 0.00 0.00 3.59
1986 6007 3.500982 GCTCTGCTCTGCTAATAGATCG 58.499 50.000 0.00 0.00 0.00 3.69
1987 6008 3.511146 AGGCTCTGCTCTGCTAATAGATC 59.489 47.826 0.00 0.00 0.00 2.75
1988 6009 3.509442 AGGCTCTGCTCTGCTAATAGAT 58.491 45.455 0.00 0.00 0.00 1.98
2029 6060 3.318275 TCGACAGCAGAGTCAGTAAAGTT 59.682 43.478 0.00 0.00 38.43 2.66
2097 6132 2.221169 TGTTGAGGCACTTGATGACAC 58.779 47.619 0.00 0.00 41.55 3.67
2119 6154 3.002583 TCCACGAGCCCAGATGCA 61.003 61.111 0.00 0.00 0.00 3.96
2133 6168 1.888436 ATCAAGCGCGGTCTTCTCCA 61.888 55.000 12.91 0.00 0.00 3.86
2206 6245 5.104193 ACCAGATGAAACATTCTCTAGCCAT 60.104 40.000 0.00 0.00 0.00 4.40
2209 6248 7.849804 TTAACCAGATGAAACATTCTCTAGC 57.150 36.000 0.00 0.00 0.00 3.42
2243 6282 6.147328 GGCCTATCGGTATTCTTTTGATGTAC 59.853 42.308 0.00 0.00 0.00 2.90
2251 6291 6.838382 ACATTTAGGCCTATCGGTATTCTTT 58.162 36.000 14.74 0.00 0.00 2.52
2326 6367 1.538950 GCTTCCTTCTTCTGCCACAAG 59.461 52.381 0.00 0.00 0.00 3.16
2352 6393 4.357279 GCCCCAGCTGTGCTTCCT 62.357 66.667 13.81 0.00 36.40 3.36
2354 6395 2.598394 TTGCCCCAGCTGTGCTTC 60.598 61.111 21.66 4.81 36.40 3.86
2428 6486 5.820423 TGCTAAGCAAGAGTTCTGTAAACAA 59.180 36.000 0.00 0.00 34.76 2.83
2497 6555 6.712241 AGAGTTCTGTAAACATGACATTCG 57.288 37.500 0.00 0.00 0.00 3.34
2554 6613 5.119694 GGAGCTCATTTACTACCCTTCTTG 58.880 45.833 17.19 0.00 0.00 3.02
2557 6616 4.755266 TGGAGCTCATTTACTACCCTTC 57.245 45.455 17.19 0.00 0.00 3.46
2560 6619 4.058817 CGATTGGAGCTCATTTACTACCC 58.941 47.826 17.19 0.00 0.00 3.69
2562 6621 5.810587 TGTTCGATTGGAGCTCATTTACTAC 59.189 40.000 17.19 6.41 0.00 2.73
2563 6622 5.972935 TGTTCGATTGGAGCTCATTTACTA 58.027 37.500 17.19 0.00 0.00 1.82
2564 6623 4.832248 TGTTCGATTGGAGCTCATTTACT 58.168 39.130 17.19 0.00 0.00 2.24
2565 6624 5.741388 ATGTTCGATTGGAGCTCATTTAC 57.259 39.130 17.19 4.52 0.00 2.01
2591 6651 4.630644 AGACTGAACCTGTGAACATCAT 57.369 40.909 0.00 0.00 0.00 2.45
2611 6671 9.950680 ATAATTGTACAAGTTCAGTCAAACAAG 57.049 29.630 14.46 0.00 0.00 3.16
2629 6689 9.020731 TCTCCTGCGATACTGATAATAATTGTA 57.979 33.333 0.00 0.00 0.00 2.41
2637 6697 3.254411 CAGCTCTCCTGCGATACTGATAA 59.746 47.826 0.00 0.00 38.13 1.75
2640 6700 1.028130 CAGCTCTCCTGCGATACTGA 58.972 55.000 0.00 0.00 38.13 3.41
2643 6703 3.438297 TTTACAGCTCTCCTGCGATAC 57.562 47.619 0.00 0.00 45.78 2.24
2648 6708 4.216257 TGTTTCAATTTACAGCTCTCCTGC 59.784 41.667 0.00 0.00 45.78 4.85
2729 6789 9.613428 TTAGCATTAGTGAGCAAATATTGTAGT 57.387 29.630 0.00 0.00 0.00 2.73
2731 6791 9.830975 TCTTAGCATTAGTGAGCAAATATTGTA 57.169 29.630 0.00 0.00 0.00 2.41
2732 6792 8.737168 TCTTAGCATTAGTGAGCAAATATTGT 57.263 30.769 0.00 0.00 0.00 2.71
2737 6797 5.521735 CGTCTCTTAGCATTAGTGAGCAAAT 59.478 40.000 0.00 0.00 0.00 2.32
2754 6814 2.736144 TTAACATGTCGGCGTCTCTT 57.264 45.000 6.85 0.00 0.00 2.85
2789 6849 8.607459 CAATATATATTCAGTCAGGCGGAAATC 58.393 37.037 4.93 0.00 35.10 2.17
2815 6875 4.527816 TCCTTCCAATATTGCCATAATGCC 59.472 41.667 10.11 0.00 0.00 4.40
2829 6889 7.965718 TCAGAACAATTTTCATTCCTTCCAAT 58.034 30.769 4.09 0.00 0.00 3.16
2830 6890 7.358770 TCAGAACAATTTTCATTCCTTCCAA 57.641 32.000 4.09 0.00 0.00 3.53
2849 6909 6.544928 TGTAAAGACTGGCTCATATCAGAA 57.455 37.500 0.00 0.00 35.20 3.02
2900 6960 5.107026 CGGAACACGGTGACATTAATGTTAA 60.107 40.000 21.63 11.08 39.10 2.01
2906 6966 1.149987 GCGGAACACGGTGACATTAA 58.850 50.000 16.29 0.00 44.51 1.40
2911 6971 0.949105 AGATTGCGGAACACGGTGAC 60.949 55.000 16.29 8.21 44.51 3.67
3107 7203 6.128929 TGTGAAGAAAATCGTGATAACGTGAG 60.129 38.462 1.71 0.00 0.00 3.51
3109 7205 5.783654 GTGTGAAGAAAATCGTGATAACGTG 59.216 40.000 1.71 0.00 0.00 4.49
3110 7206 5.464057 TGTGTGAAGAAAATCGTGATAACGT 59.536 36.000 1.71 0.00 0.00 3.99
3111 7207 5.911421 TGTGTGAAGAAAATCGTGATAACG 58.089 37.500 0.00 0.00 0.00 3.18
3173 7270 7.530426 TTCGGTAACTAAAGAGGAGTTAAGT 57.470 36.000 0.00 0.00 40.23 2.24
3179 7276 9.379791 ACATTATTTTCGGTAACTAAAGAGGAG 57.620 33.333 0.00 0.00 32.32 3.69
3192 7289 7.174253 ACACATAGTTGACACATTATTTTCGGT 59.826 33.333 0.00 0.00 0.00 4.69
3195 7292 9.490663 GCTACACATAGTTGACACATTATTTTC 57.509 33.333 0.00 0.00 0.00 2.29
3314 7496 3.005791 AGGCATAGTTTGTTCAAAGGCAC 59.994 43.478 0.00 0.00 0.00 5.01
3315 7497 3.005684 CAGGCATAGTTTGTTCAAAGGCA 59.994 43.478 0.00 0.00 0.00 4.75
3324 7507 7.539034 AAAAGGTTAATCAGGCATAGTTTGT 57.461 32.000 0.00 0.00 0.00 2.83
3404 7591 9.342308 TCTTCTATTTTATCCATAAGCCTGTTG 57.658 33.333 0.00 0.00 0.00 3.33
3460 7647 5.436175 TCATGGTATAAACACAGGGATGTG 58.564 41.667 6.83 6.83 44.74 3.21
3542 7733 6.899393 TGGACATTAAGCAAGAAATCACTT 57.101 33.333 0.00 0.00 0.00 3.16
3543 7734 6.096001 GGATGGACATTAAGCAAGAAATCACT 59.904 38.462 0.00 0.00 0.00 3.41
3554 7745 9.066892 TGTAATCTTATTGGATGGACATTAAGC 57.933 33.333 0.00 0.00 35.68 3.09
3559 7750 7.577303 ACTGTGTAATCTTATTGGATGGACAT 58.423 34.615 0.00 0.00 30.47 3.06
3561 7752 7.047891 TGACTGTGTAATCTTATTGGATGGAC 58.952 38.462 0.00 0.00 0.00 4.02
3562 7753 7.194112 TGACTGTGTAATCTTATTGGATGGA 57.806 36.000 0.00 0.00 0.00 3.41
3563 7754 8.347771 CAATGACTGTGTAATCTTATTGGATGG 58.652 37.037 0.00 0.00 0.00 3.51
3564 7755 7.859377 GCAATGACTGTGTAATCTTATTGGATG 59.141 37.037 0.00 0.00 0.00 3.51
3565 7756 7.557358 TGCAATGACTGTGTAATCTTATTGGAT 59.443 33.333 0.00 0.00 0.00 3.41
3567 7758 7.087409 TGCAATGACTGTGTAATCTTATTGG 57.913 36.000 0.00 0.00 0.00 3.16
3568 7759 9.577110 AATTGCAATGACTGTGTAATCTTATTG 57.423 29.630 13.82 0.00 31.14 1.90
3572 7763 9.793252 GATAAATTGCAATGACTGTGTAATCTT 57.207 29.630 13.82 1.08 31.14 2.40
3574 7765 9.793252 AAGATAAATTGCAATGACTGTGTAATC 57.207 29.630 13.82 6.02 31.14 1.75
3577 7768 8.969121 CAAAGATAAATTGCAATGACTGTGTA 57.031 30.769 13.82 0.00 0.00 2.90
3594 7785 9.874205 CAATCCAAAAATTCCTAGCAAAGATAA 57.126 29.630 0.00 0.00 0.00 1.75
3595 7786 9.034800 ACAATCCAAAAATTCCTAGCAAAGATA 57.965 29.630 0.00 0.00 0.00 1.98
3596 7787 7.910584 ACAATCCAAAAATTCCTAGCAAAGAT 58.089 30.769 0.00 0.00 0.00 2.40
3597 7788 7.301868 ACAATCCAAAAATTCCTAGCAAAGA 57.698 32.000 0.00 0.00 0.00 2.52
3598 7789 7.967890 AACAATCCAAAAATTCCTAGCAAAG 57.032 32.000 0.00 0.00 0.00 2.77
3599 7790 8.210265 AGAAACAATCCAAAAATTCCTAGCAAA 58.790 29.630 0.00 0.00 0.00 3.68
3600 7791 7.656948 CAGAAACAATCCAAAAATTCCTAGCAA 59.343 33.333 0.00 0.00 0.00 3.91
3601 7792 7.153985 CAGAAACAATCCAAAAATTCCTAGCA 58.846 34.615 0.00 0.00 0.00 3.49
3602 7793 6.591448 CCAGAAACAATCCAAAAATTCCTAGC 59.409 38.462 0.00 0.00 0.00 3.42
3603 7794 7.670364 ACCAGAAACAATCCAAAAATTCCTAG 58.330 34.615 0.00 0.00 0.00 3.02
3604 7795 7.610580 ACCAGAAACAATCCAAAAATTCCTA 57.389 32.000 0.00 0.00 0.00 2.94
3605 7796 6.499106 ACCAGAAACAATCCAAAAATTCCT 57.501 33.333 0.00 0.00 0.00 3.36
3606 7797 9.936759 TTATACCAGAAACAATCCAAAAATTCC 57.063 29.630 0.00 0.00 0.00 3.01
3615 7806 9.981114 CCCAATTATTTATACCAGAAACAATCC 57.019 33.333 0.00 0.00 0.00 3.01
3632 7823 9.492730 ACTTGATGGAATTCTTACCCAATTATT 57.507 29.630 5.23 0.00 33.15 1.40
3634 7825 9.627123 CTACTTGATGGAATTCTTACCCAATTA 57.373 33.333 5.23 2.33 33.15 1.40
3639 7830 5.437060 TGCTACTTGATGGAATTCTTACCC 58.563 41.667 5.23 0.00 0.00 3.69
3642 7833 9.276590 CATGTATGCTACTTGATGGAATTCTTA 57.723 33.333 5.23 0.00 36.31 2.10
3647 7838 5.766670 CCACATGTATGCTACTTGATGGAAT 59.233 40.000 0.00 0.00 37.29 3.01
3654 7845 6.317140 AGACAATTCCACATGTATGCTACTTG 59.683 38.462 0.00 0.00 39.10 3.16
3655 7846 6.418101 AGACAATTCCACATGTATGCTACTT 58.582 36.000 0.00 0.00 0.00 2.24
3656 7847 5.994250 AGACAATTCCACATGTATGCTACT 58.006 37.500 0.00 0.00 0.00 2.57
3685 7876 1.423584 TCAAGCCTCAACACCTCTCA 58.576 50.000 0.00 0.00 0.00 3.27
3686 7877 2.354259 CATCAAGCCTCAACACCTCTC 58.646 52.381 0.00 0.00 0.00 3.20
3720 7911 9.699410 ACAAGGAGAATAATAAACCATGATGAA 57.301 29.630 0.00 0.00 0.00 2.57
3735 7926 8.540388 GCCAGGTCAATATATACAAGGAGAATA 58.460 37.037 0.00 0.00 0.00 1.75
3736 7927 7.238514 AGCCAGGTCAATATATACAAGGAGAAT 59.761 37.037 0.00 0.00 0.00 2.40
3737 7928 6.558775 AGCCAGGTCAATATATACAAGGAGAA 59.441 38.462 0.00 0.00 0.00 2.87
3739 7930 6.365970 AGCCAGGTCAATATATACAAGGAG 57.634 41.667 0.00 0.00 0.00 3.69
3741 7932 7.823745 AAAAGCCAGGTCAATATATACAAGG 57.176 36.000 0.00 0.00 0.00 3.61
3769 7961 7.122055 ACAGTTATTCACCTGTGACAAAAGAAA 59.878 33.333 0.00 0.00 40.30 2.52
3775 7967 5.290493 AGACAGTTATTCACCTGTGACAA 57.710 39.130 0.00 0.00 41.80 3.18
3859 8051 4.621068 ATGGAGCGTACACATTCAAATG 57.379 40.909 1.20 1.20 42.10 2.32
3861 8053 5.391523 GCTAAATGGAGCGTACACATTCAAA 60.392 40.000 0.00 0.00 34.00 2.69
3874 8067 3.684788 TCAGAGTTTTCGCTAAATGGAGC 59.315 43.478 0.00 0.00 39.20 4.70
3880 8073 6.671614 TTCAGTTTCAGAGTTTTCGCTAAA 57.328 33.333 0.00 0.00 0.00 1.85
3886 8080 4.964555 GTCGCTTTCAGTTTCAGAGTTTTC 59.035 41.667 0.00 0.00 0.00 2.29
3909 8103 6.741992 TTTACTCTACACAGGCAAATCATG 57.258 37.500 0.00 0.00 0.00 3.07
3911 8105 6.426937 GTCTTTTACTCTACACAGGCAAATCA 59.573 38.462 0.00 0.00 0.00 2.57
3912 8106 6.651225 AGTCTTTTACTCTACACAGGCAAATC 59.349 38.462 0.00 0.00 30.33 2.17
3913 8107 6.534634 AGTCTTTTACTCTACACAGGCAAAT 58.465 36.000 0.00 0.00 30.33 2.32
3924 8121 4.347000 ACAGTGGCCAAGTCTTTTACTCTA 59.653 41.667 7.24 0.00 37.50 2.43
3933 8130 0.037303 CCATGACAGTGGCCAAGTCT 59.963 55.000 29.36 13.67 33.56 3.24
3937 8134 0.251297 CCTTCCATGACAGTGGCCAA 60.251 55.000 7.24 0.00 39.19 4.52
3943 8140 0.247736 GCGAGTCCTTCCATGACAGT 59.752 55.000 0.00 0.00 35.15 3.55
3991 8188 2.202610 TGCGTCGCGATCCTTCAG 60.203 61.111 14.06 0.00 0.00 3.02
4019 8219 1.868997 CAGGGCAGTAAAGTGCGTG 59.131 57.895 3.81 0.89 45.00 5.34
4022 8222 0.242017 CAAGCAGGGCAGTAAAGTGC 59.758 55.000 0.97 0.97 43.19 4.40
4024 8224 2.307098 AGATCAAGCAGGGCAGTAAAGT 59.693 45.455 0.00 0.00 0.00 2.66
4026 8231 2.715046 CAGATCAAGCAGGGCAGTAAA 58.285 47.619 0.00 0.00 0.00 2.01
4040 8246 5.009811 CACAGTCAGAGATAGATGCAGATCA 59.990 44.000 8.32 0.00 0.00 2.92
4044 8250 4.915158 TCACAGTCAGAGATAGATGCAG 57.085 45.455 0.00 0.00 0.00 4.41
4045 8251 5.866159 AATCACAGTCAGAGATAGATGCA 57.134 39.130 0.00 0.00 0.00 3.96
4054 8260 4.931601 TCGGATGAAAAATCACAGTCAGAG 59.068 41.667 0.00 0.00 0.00 3.35
4059 8265 7.106239 AGTAAGATCGGATGAAAAATCACAGT 58.894 34.615 0.00 0.00 0.00 3.55
4064 8270 7.926555 TGTAGGAGTAAGATCGGATGAAAAATC 59.073 37.037 0.00 0.00 0.00 2.17
4084 8290 4.721776 AGAGGAAACAAGGCATATGTAGGA 59.278 41.667 4.29 0.00 0.00 2.94
4085 8291 4.818546 CAGAGGAAACAAGGCATATGTAGG 59.181 45.833 4.29 0.00 0.00 3.18
4086 8292 4.274459 GCAGAGGAAACAAGGCATATGTAG 59.726 45.833 4.29 0.00 0.00 2.74
4087 8293 4.199310 GCAGAGGAAACAAGGCATATGTA 58.801 43.478 4.29 0.00 0.00 2.29
4088 8294 3.019564 GCAGAGGAAACAAGGCATATGT 58.980 45.455 4.29 0.00 0.00 2.29
4089 8295 3.018856 TGCAGAGGAAACAAGGCATATG 58.981 45.455 0.00 0.00 0.00 1.78
4090 8296 3.370840 TGCAGAGGAAACAAGGCATAT 57.629 42.857 0.00 0.00 0.00 1.78
4091 8297 2.877097 TGCAGAGGAAACAAGGCATA 57.123 45.000 0.00 0.00 0.00 3.14
4092 8298 1.822990 CATGCAGAGGAAACAAGGCAT 59.177 47.619 0.00 0.00 41.13 4.40
4093 8299 1.250328 CATGCAGAGGAAACAAGGCA 58.750 50.000 0.00 0.00 36.38 4.75
4115 8321 2.036217 TCCAGCCTGCTGAATTGTTTTG 59.964 45.455 20.29 0.70 46.30 2.44
4166 8375 2.228822 GGAAGAGCCATTTCAAAGCGAA 59.771 45.455 0.00 0.00 36.34 4.70
4196 8408 1.345176 CGAGAAAATGACGGCGAGC 59.655 57.895 16.62 5.63 0.00 5.03
4206 8418 4.377021 TGTTATAGCGATGGCGAGAAAAT 58.623 39.130 0.00 0.00 46.35 1.82
4221 8433 3.521560 ACACTGGCACACGATGTTATAG 58.478 45.455 0.00 0.00 0.00 1.31
4224 8436 2.036089 TGTACACTGGCACACGATGTTA 59.964 45.455 0.00 0.00 0.00 2.41
4227 8439 1.725641 ATGTACACTGGCACACGATG 58.274 50.000 0.00 0.00 0.00 3.84
4230 8442 3.776340 TGTATATGTACACTGGCACACG 58.224 45.455 0.00 0.00 35.94 4.49
4245 8457 6.439636 AATGTCTGTACAGGGCATGTATAT 57.560 37.500 24.26 12.43 45.94 0.86
4246 8458 5.887214 AATGTCTGTACAGGGCATGTATA 57.113 39.130 24.26 11.83 45.94 1.47
4275 8487 7.388776 TCAACCTAGTCATCACAAAGAGAAATG 59.611 37.037 0.00 0.00 0.00 2.32
4276 8488 7.453393 TCAACCTAGTCATCACAAAGAGAAAT 58.547 34.615 0.00 0.00 0.00 2.17
4277 8489 6.826668 TCAACCTAGTCATCACAAAGAGAAA 58.173 36.000 0.00 0.00 0.00 2.52
4278 8490 6.042093 ACTCAACCTAGTCATCACAAAGAGAA 59.958 38.462 0.00 0.00 0.00 2.87
4279 8491 5.540337 ACTCAACCTAGTCATCACAAAGAGA 59.460 40.000 0.00 0.00 0.00 3.10
4280 8492 5.788450 ACTCAACCTAGTCATCACAAAGAG 58.212 41.667 0.00 0.00 0.00 2.85
4310 8522 8.333186 GCTTAATTAACCACCTAACTAATGTCG 58.667 37.037 0.00 0.00 0.00 4.35
4327 8539 7.394359 GGATGAGCCTTATCCATGCTTAATTAA 59.606 37.037 10.49 0.00 42.93 1.40
4328 8540 6.886459 GGATGAGCCTTATCCATGCTTAATTA 59.114 38.462 10.49 0.00 42.93 1.40
4329 8541 5.713861 GGATGAGCCTTATCCATGCTTAATT 59.286 40.000 10.49 0.00 42.93 1.40
4330 8542 5.222192 TGGATGAGCCTTATCCATGCTTAAT 60.222 40.000 13.83 0.00 46.84 1.40
4351 8563 1.327303 AGCAAAAACGGAAGCATGGA 58.673 45.000 0.00 0.00 0.00 3.41
4360 8572 1.134175 ACAGTGTGGAAGCAAAAACGG 59.866 47.619 0.00 0.00 0.00 4.44
4361 8573 2.159448 TCACAGTGTGGAAGCAAAAACG 60.159 45.455 22.79 0.00 33.87 3.60
4378 8590 8.974060 AATAGTAGTTCAAAAGGAGTTTCACA 57.026 30.769 0.00 0.00 0.00 3.58
4425 8638 2.662866 CAGCATCCCAGATGTCCAAAT 58.337 47.619 6.46 0.00 0.00 2.32
4566 8779 5.414535 CGAAAATTTGTTGAAACTGCGAAG 58.585 37.500 0.00 0.00 0.00 3.79
4568 8781 3.794028 CCGAAAATTTGTTGAAACTGCGA 59.206 39.130 0.00 0.00 0.00 5.10
4573 8786 8.994881 GTTGAAATTCCGAAAATTTGTTGAAAC 58.005 29.630 11.61 6.39 30.68 2.78
4577 8790 8.945930 CAATGTTGAAATTCCGAAAATTTGTTG 58.054 29.630 11.61 6.68 30.68 3.33
4580 8793 9.157259 GAACAATGTTGAAATTCCGAAAATTTG 57.843 29.630 2.20 2.04 30.68 2.32
4585 8798 6.073873 GCATGAACAATGTTGAAATTCCGAAA 60.074 34.615 2.20 0.00 38.65 3.46
4589 8802 6.790285 AAGCATGAACAATGTTGAAATTCC 57.210 33.333 2.20 0.00 38.65 3.01
4715 8932 9.643693 AATGCAATTATTTCTCAAAAGACGAAT 57.356 25.926 0.00 0.00 32.46 3.34
4802 9026 9.548208 GGAAAAACGAAATTGTTTGAAAATTCA 57.452 25.926 0.00 0.00 41.01 2.57
4804 9028 8.735315 AGGGAAAAACGAAATTGTTTGAAAATT 58.265 25.926 0.00 0.00 41.01 1.82
4865 9093 9.761504 TGTTGAACATTATTTGACATTTGTGAT 57.238 25.926 0.00 0.00 0.00 3.06
4866 9094 9.761504 ATGTTGAACATTATTTGACATTTGTGA 57.238 25.926 4.72 0.00 34.67 3.58
4881 9109 9.357652 GAACATGCTGTTAATATGTTGAACATT 57.642 29.630 16.75 2.66 43.03 2.71
4882 9110 7.697710 CGAACATGCTGTTAATATGTTGAACAT 59.302 33.333 15.80 15.80 43.03 2.71
4883 9111 7.020602 CGAACATGCTGTTAATATGTTGAACA 58.979 34.615 0.00 0.00 43.03 3.18
4884 9112 6.468956 CCGAACATGCTGTTAATATGTTGAAC 59.531 38.462 6.56 0.00 43.03 3.18
4885 9113 6.372937 TCCGAACATGCTGTTAATATGTTGAA 59.627 34.615 6.56 0.00 43.03 2.69
4886 9114 5.877564 TCCGAACATGCTGTTAATATGTTGA 59.122 36.000 6.56 0.00 43.03 3.18
4887 9115 6.117911 TCCGAACATGCTGTTAATATGTTG 57.882 37.500 6.56 0.95 43.03 3.33
4888 9116 5.880332 ACTCCGAACATGCTGTTAATATGTT 59.120 36.000 0.00 0.00 44.96 2.71
4889 9117 5.428253 ACTCCGAACATGCTGTTAATATGT 58.572 37.500 0.00 0.00 41.28 2.29
4890 9118 5.050091 GGACTCCGAACATGCTGTTAATATG 60.050 44.000 0.00 0.00 41.28 1.78
4891 9119 5.057149 GGACTCCGAACATGCTGTTAATAT 58.943 41.667 0.00 0.00 41.28 1.28
4892 9120 4.439057 GGACTCCGAACATGCTGTTAATA 58.561 43.478 0.00 0.00 41.28 0.98
4893 9121 3.270877 GGACTCCGAACATGCTGTTAAT 58.729 45.455 0.00 0.00 41.28 1.40
4894 9122 2.614481 GGGACTCCGAACATGCTGTTAA 60.614 50.000 0.00 0.00 41.28 2.01
4895 9123 1.066430 GGGACTCCGAACATGCTGTTA 60.066 52.381 0.00 0.00 41.28 2.41
4896 9124 0.321653 GGGACTCCGAACATGCTGTT 60.322 55.000 0.00 1.82 44.37 3.16
4897 9125 1.194781 AGGGACTCCGAACATGCTGT 61.195 55.000 0.00 0.00 38.33 4.40
4898 9126 1.599047 AGGGACTCCGAACATGCTG 59.401 57.895 0.00 0.00 38.33 4.41
4899 9127 4.136978 AGGGACTCCGAACATGCT 57.863 55.556 0.00 0.00 38.33 3.79
4910 9138 1.913762 CTGGTGGAACGGAGGGACT 60.914 63.158 0.00 0.00 39.59 3.85
4911 9139 2.663196 CTGGTGGAACGGAGGGAC 59.337 66.667 0.00 0.00 38.12 4.46
4912 9140 2.606519 CCTGGTGGAACGGAGGGA 60.607 66.667 0.00 0.00 38.12 4.20
4913 9141 4.410400 GCCTGGTGGAACGGAGGG 62.410 72.222 0.00 0.00 37.55 4.30
4914 9142 4.410400 GGCCTGGTGGAACGGAGG 62.410 72.222 0.00 0.00 39.48 4.30
4915 9143 3.636231 TGGCCTGGTGGAACGGAG 61.636 66.667 3.32 0.00 38.12 4.63
4916 9144 3.948719 GTGGCCTGGTGGAACGGA 61.949 66.667 3.32 0.00 38.12 4.69
4917 9145 3.901797 GAGTGGCCTGGTGGAACGG 62.902 68.421 3.32 0.00 38.12 4.44
4918 9146 2.358737 GAGTGGCCTGGTGGAACG 60.359 66.667 3.32 0.00 38.12 3.95
4919 9147 2.034221 GGAGTGGCCTGGTGGAAC 59.966 66.667 3.32 0.00 34.57 3.62
4920 9148 2.449518 TGGAGTGGCCTGGTGGAA 60.450 61.111 3.32 0.00 37.63 3.53
4921 9149 2.930019 CTGGAGTGGCCTGGTGGA 60.930 66.667 3.32 0.00 37.63 4.02
4926 9154 3.007920 AGCTCCTGGAGTGGCCTG 61.008 66.667 23.92 0.00 37.63 4.85
4927 9155 2.836672 ATCAGCTCCTGGAGTGGCCT 62.837 60.000 23.92 10.33 37.63 5.19
4928 9156 2.373707 ATCAGCTCCTGGAGTGGCC 61.374 63.158 23.92 8.15 31.51 5.36
4929 9157 1.153208 CATCAGCTCCTGGAGTGGC 60.153 63.158 23.92 11.67 31.51 5.01
4930 9158 0.979709 TCCATCAGCTCCTGGAGTGG 60.980 60.000 23.92 21.69 36.63 4.00
4931 9159 2.600439 TCCATCAGCTCCTGGAGTG 58.400 57.895 23.92 19.25 36.63 3.51
4934 9162 1.198713 GAACTCCATCAGCTCCTGGA 58.801 55.000 12.19 12.19 39.23 3.86
4935 9163 1.202330 AGAACTCCATCAGCTCCTGG 58.798 55.000 4.91 4.91 31.51 4.45
4936 9164 3.030291 ACTAGAACTCCATCAGCTCCTG 58.970 50.000 0.00 0.00 0.00 3.86
4937 9165 3.396685 ACTAGAACTCCATCAGCTCCT 57.603 47.619 0.00 0.00 0.00 3.69
4938 9166 5.599999 TTAACTAGAACTCCATCAGCTCC 57.400 43.478 0.00 0.00 0.00 4.70
4939 9167 6.036626 GCTTTTAACTAGAACTCCATCAGCTC 59.963 42.308 0.00 0.00 0.00 4.09
4940 9168 5.877564 GCTTTTAACTAGAACTCCATCAGCT 59.122 40.000 0.00 0.00 0.00 4.24
4941 9169 5.877564 AGCTTTTAACTAGAACTCCATCAGC 59.122 40.000 0.00 0.00 0.00 4.26
4942 9170 6.183360 GCAGCTTTTAACTAGAACTCCATCAG 60.183 42.308 0.00 0.00 0.00 2.90
4943 9171 5.643777 GCAGCTTTTAACTAGAACTCCATCA 59.356 40.000 0.00 0.00 0.00 3.07
4944 9172 5.220491 CGCAGCTTTTAACTAGAACTCCATC 60.220 44.000 0.00 0.00 0.00 3.51
4945 9173 4.631813 CGCAGCTTTTAACTAGAACTCCAT 59.368 41.667 0.00 0.00 0.00 3.41
4946 9174 3.994392 CGCAGCTTTTAACTAGAACTCCA 59.006 43.478 0.00 0.00 0.00 3.86
4947 9175 3.371285 CCGCAGCTTTTAACTAGAACTCC 59.629 47.826 0.00 0.00 0.00 3.85
4948 9176 4.243270 TCCGCAGCTTTTAACTAGAACTC 58.757 43.478 0.00 0.00 0.00 3.01
4949 9177 4.246458 CTCCGCAGCTTTTAACTAGAACT 58.754 43.478 0.00 0.00 0.00 3.01
4950 9178 3.181519 GCTCCGCAGCTTTTAACTAGAAC 60.182 47.826 0.00 0.00 43.09 3.01
4951 9179 3.000727 GCTCCGCAGCTTTTAACTAGAA 58.999 45.455 0.00 0.00 43.09 2.10
4952 9180 2.618053 GCTCCGCAGCTTTTAACTAGA 58.382 47.619 0.00 0.00 43.09 2.43
4953 9181 1.666189 GGCTCCGCAGCTTTTAACTAG 59.334 52.381 0.00 0.00 46.03 2.57
4954 9182 1.002659 TGGCTCCGCAGCTTTTAACTA 59.997 47.619 0.00 0.00 46.03 2.24
4955 9183 0.250727 TGGCTCCGCAGCTTTTAACT 60.251 50.000 0.00 0.00 46.03 2.24
4956 9184 0.169009 CTGGCTCCGCAGCTTTTAAC 59.831 55.000 0.00 0.00 46.03 2.01
4957 9185 1.586154 GCTGGCTCCGCAGCTTTTAA 61.586 55.000 0.00 0.00 46.03 1.52
4958 9186 2.040544 GCTGGCTCCGCAGCTTTTA 61.041 57.895 0.00 0.00 46.03 1.52
4959 9187 3.368571 GCTGGCTCCGCAGCTTTT 61.369 61.111 0.00 0.00 46.03 2.27
4964 9192 2.985282 TTTTGGCTGGCTCCGCAG 60.985 61.111 2.00 0.00 0.00 5.18
4965 9193 2.985282 CTTTTGGCTGGCTCCGCA 60.985 61.111 2.00 0.00 0.00 5.69
4966 9194 3.752339 CCTTTTGGCTGGCTCCGC 61.752 66.667 2.00 0.00 0.00 5.54
4967 9195 1.002624 TACCTTTTGGCTGGCTCCG 60.003 57.895 2.00 0.00 45.59 4.63
4968 9196 0.038310 AGTACCTTTTGGCTGGCTCC 59.962 55.000 2.00 0.00 45.59 4.70
4969 9197 1.454201 GAGTACCTTTTGGCTGGCTC 58.546 55.000 2.00 0.00 45.59 4.70
4970 9198 0.038310 GGAGTACCTTTTGGCTGGCT 59.962 55.000 2.00 0.00 45.59 4.75
4971 9199 1.305930 CGGAGTACCTTTTGGCTGGC 61.306 60.000 0.00 0.00 45.59 4.85
4972 9200 1.305930 GCGGAGTACCTTTTGGCTGG 61.306 60.000 0.00 0.00 45.59 4.85
4973 9201 0.605319 TGCGGAGTACCTTTTGGCTG 60.605 55.000 0.00 0.00 45.59 4.85
4974 9202 0.321653 CTGCGGAGTACCTTTTGGCT 60.322 55.000 0.00 0.00 45.59 4.75
4975 9203 0.321298 TCTGCGGAGTACCTTTTGGC 60.321 55.000 3.10 0.00 45.59 4.52
4977 9205 3.600388 AGAATCTGCGGAGTACCTTTTG 58.400 45.455 3.10 0.00 0.00 2.44
4978 9206 3.983044 AGAATCTGCGGAGTACCTTTT 57.017 42.857 3.10 0.00 0.00 2.27
4979 9207 3.260884 TGAAGAATCTGCGGAGTACCTTT 59.739 43.478 3.10 0.00 0.00 3.11
4980 9208 2.832129 TGAAGAATCTGCGGAGTACCTT 59.168 45.455 3.10 5.57 0.00 3.50
4981 9209 2.457598 TGAAGAATCTGCGGAGTACCT 58.542 47.619 3.10 0.00 0.00 3.08
4982 9210 2.961526 TGAAGAATCTGCGGAGTACC 57.038 50.000 3.10 0.00 0.00 3.34
4983 9211 5.112686 AGAATTGAAGAATCTGCGGAGTAC 58.887 41.667 3.10 0.00 0.00 2.73
4984 9212 5.344743 AGAATTGAAGAATCTGCGGAGTA 57.655 39.130 3.10 0.00 0.00 2.59
4985 9213 4.213564 AGAATTGAAGAATCTGCGGAGT 57.786 40.909 3.10 0.00 0.00 3.85
4986 9214 4.208047 CGTAGAATTGAAGAATCTGCGGAG 59.792 45.833 0.00 0.00 34.00 4.63
4987 9215 4.112634 CGTAGAATTGAAGAATCTGCGGA 58.887 43.478 0.00 0.00 34.00 5.54
4988 9216 3.246226 CCGTAGAATTGAAGAATCTGCGG 59.754 47.826 15.12 15.12 46.37 5.69
4989 9217 4.112634 TCCGTAGAATTGAAGAATCTGCG 58.887 43.478 5.68 5.68 36.56 5.18
4990 9218 5.006165 CACTCCGTAGAATTGAAGAATCTGC 59.994 44.000 0.00 0.00 0.00 4.26
4991 9219 5.521735 CCACTCCGTAGAATTGAAGAATCTG 59.478 44.000 0.00 0.00 0.00 2.90
4992 9220 5.395768 CCCACTCCGTAGAATTGAAGAATCT 60.396 44.000 0.00 0.00 0.00 2.40
4993 9221 4.811557 CCCACTCCGTAGAATTGAAGAATC 59.188 45.833 0.00 0.00 0.00 2.52
4994 9222 4.225267 ACCCACTCCGTAGAATTGAAGAAT 59.775 41.667 0.00 0.00 0.00 2.40
4995 9223 3.581332 ACCCACTCCGTAGAATTGAAGAA 59.419 43.478 0.00 0.00 0.00 2.52
4996 9224 3.056107 CACCCACTCCGTAGAATTGAAGA 60.056 47.826 0.00 0.00 0.00 2.87
4997 9225 3.262420 CACCCACTCCGTAGAATTGAAG 58.738 50.000 0.00 0.00 0.00 3.02
4998 9226 2.027561 CCACCCACTCCGTAGAATTGAA 60.028 50.000 0.00 0.00 0.00 2.69
4999 9227 1.553248 CCACCCACTCCGTAGAATTGA 59.447 52.381 0.00 0.00 0.00 2.57
5000 9228 1.553248 TCCACCCACTCCGTAGAATTG 59.447 52.381 0.00 0.00 0.00 2.32
5001 9229 1.553704 GTCCACCCACTCCGTAGAATT 59.446 52.381 0.00 0.00 0.00 2.17
5002 9230 1.192428 GTCCACCCACTCCGTAGAAT 58.808 55.000 0.00 0.00 0.00 2.40
5003 9231 0.113776 AGTCCACCCACTCCGTAGAA 59.886 55.000 0.00 0.00 0.00 2.10
5004 9232 0.611062 CAGTCCACCCACTCCGTAGA 60.611 60.000 0.00 0.00 0.00 2.59
5005 9233 1.890894 CAGTCCACCCACTCCGTAG 59.109 63.158 0.00 0.00 0.00 3.51
5006 9234 2.280552 GCAGTCCACCCACTCCGTA 61.281 63.158 0.00 0.00 0.00 4.02
5007 9235 3.626924 GCAGTCCACCCACTCCGT 61.627 66.667 0.00 0.00 0.00 4.69
5008 9236 4.394712 GGCAGTCCACCCACTCCG 62.395 72.222 0.00 0.00 0.00 4.63
5009 9237 4.394712 CGGCAGTCCACCCACTCC 62.395 72.222 0.00 0.00 0.00 3.85
5010 9238 2.879233 TTCGGCAGTCCACCCACTC 61.879 63.158 0.00 0.00 0.00 3.51
5011 9239 2.847234 TTCGGCAGTCCACCCACT 60.847 61.111 0.00 0.00 0.00 4.00
5012 9240 2.668550 GTTCGGCAGTCCACCCAC 60.669 66.667 0.00 0.00 0.00 4.61
5013 9241 3.164977 TGTTCGGCAGTCCACCCA 61.165 61.111 0.00 0.00 0.00 4.51
5014 9242 2.358737 CTGTTCGGCAGTCCACCC 60.359 66.667 0.00 0.00 40.27 4.61
5015 9243 3.050275 GCTGTTCGGCAGTCCACC 61.050 66.667 9.08 0.00 46.64 4.61
5016 9244 2.029844 GAGCTGTTCGGCAGTCCAC 61.030 63.158 0.00 0.00 46.64 4.02
5017 9245 2.343758 GAGCTGTTCGGCAGTCCA 59.656 61.111 0.00 0.00 46.64 4.02
5018 9246 1.605058 TAGGAGCTGTTCGGCAGTCC 61.605 60.000 0.00 14.81 46.64 3.85
5019 9247 0.246635 TTAGGAGCTGTTCGGCAGTC 59.753 55.000 0.00 6.10 46.64 3.51
5020 9248 0.685097 TTTAGGAGCTGTTCGGCAGT 59.315 50.000 0.00 0.00 46.64 4.40
5022 9250 2.264005 TTTTTAGGAGCTGTTCGGCA 57.736 45.000 0.00 0.00 34.17 5.69
5023 9251 2.488153 ACATTTTTAGGAGCTGTTCGGC 59.512 45.455 0.00 0.00 0.00 5.54
5024 9252 4.215399 TGAACATTTTTAGGAGCTGTTCGG 59.785 41.667 0.00 0.00 45.38 4.30
5025 9253 5.356882 TGAACATTTTTAGGAGCTGTTCG 57.643 39.130 0.00 0.00 45.38 3.95
5026 9254 8.593492 AAAATGAACATTTTTAGGAGCTGTTC 57.407 30.769 16.52 6.75 45.67 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.