Multiple sequence alignment - TraesCS5A01G542900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G542900 chr5A 100.000 7929 0 0 1 7929 698628330 698636258 0.000000e+00 14643.0
1 TraesCS5A01G542900 chr5A 100.000 1499 0 0 8273 9771 698636602 698638100 0.000000e+00 2769.0
2 TraesCS5A01G542900 chr5A 93.195 338 22 1 6778 7114 495775622 495775959 6.820000e-136 496.0
3 TraesCS5A01G542900 chr5A 80.580 345 44 12 9443 9771 687690982 687691319 2.730000e-60 244.0
4 TraesCS5A01G542900 chr5A 90.000 50 5 0 90 139 120653059 120653108 2.280000e-06 65.8
5 TraesCS5A01G542900 chr4B 91.839 4313 169 67 350 4594 656911494 656907297 0.000000e+00 5845.0
6 TraesCS5A01G542900 chr4B 92.228 1441 78 15 4594 6013 656907126 656905699 0.000000e+00 2010.0
7 TraesCS5A01G542900 chr4B 92.439 820 30 7 7115 7904 656904910 656904093 0.000000e+00 1142.0
8 TraesCS5A01G542900 chr4B 94.149 752 23 9 6034 6777 656905644 656904906 0.000000e+00 1125.0
9 TraesCS5A01G542900 chr4B 85.597 854 52 24 8939 9771 656903340 656902537 0.000000e+00 830.0
10 TraesCS5A01G542900 chr4B 89.033 693 40 19 8289 8975 656904003 656903341 0.000000e+00 826.0
11 TraesCS5A01G542900 chr4B 97.041 169 5 0 186 354 143898150 143897982 1.610000e-72 285.0
12 TraesCS5A01G542900 chr4B 96.296 54 2 0 4 57 656912236 656912183 1.350000e-13 89.8
13 TraesCS5A01G542900 chr4B 87.097 62 6 2 601 660 633725280 633725219 1.760000e-07 69.4
14 TraesCS5A01G542900 chr4D 95.824 3257 92 22 725 3954 509819039 509822278 0.000000e+00 5221.0
15 TraesCS5A01G542900 chr4D 90.730 1219 80 7 4636 5826 509823405 509824618 0.000000e+00 1594.0
16 TraesCS5A01G542900 chr4D 91.128 665 34 6 3940 4595 509822456 509823104 0.000000e+00 878.0
17 TraesCS5A01G542900 chr4D 97.534 365 8 1 6070 6433 509825073 509825437 3.000000e-174 623.0
18 TraesCS5A01G542900 chr4D 86.631 561 48 14 7227 7764 509825848 509826404 6.530000e-166 595.0
19 TraesCS5A01G542900 chr4D 90.452 398 27 7 9383 9771 509827886 509828281 1.880000e-141 514.0
20 TraesCS5A01G542900 chr4D 92.027 301 21 3 8282 8580 509826847 509827146 4.220000e-113 420.0
21 TraesCS5A01G542900 chr4D 90.040 251 17 7 8512 8760 509827146 509827390 1.580000e-82 318.0
22 TraesCS5A01G542900 chr4D 81.772 395 47 14 9393 9771 503355719 503356104 3.430000e-79 307.0
23 TraesCS5A01G542900 chr4D 86.000 150 12 3 7787 7927 509826577 509826726 1.700000e-32 152.0
24 TraesCS5A01G542900 chr4D 88.679 106 12 0 57 162 509818352 509818457 7.960000e-26 130.0
25 TraesCS5A01G542900 chr7A 97.633 338 8 0 6777 7114 206962489 206962152 1.830000e-161 580.0
26 TraesCS5A01G542900 chr7A 97.633 338 8 0 6777 7114 622337653 622337990 1.830000e-161 580.0
27 TraesCS5A01G542900 chr7A 97.561 328 8 0 6787 7114 206970092 206969765 6.630000e-156 562.0
28 TraesCS5A01G542900 chr7A 95.455 176 7 1 176 351 589994224 589994050 7.470000e-71 279.0
29 TraesCS5A01G542900 chr7A 90.123 81 7 1 512 591 17210299 17210379 4.830000e-18 104.0
30 TraesCS5A01G542900 chr7D 79.760 835 117 25 3469 4285 127226444 127227244 8.570000e-155 558.0
31 TraesCS5A01G542900 chr7D 75.096 779 111 37 3560 4285 127225101 127225849 4.470000e-73 287.0
32 TraesCS5A01G542900 chr7D 90.291 103 9 1 3266 3368 127222748 127222849 6.160000e-27 134.0
33 TraesCS5A01G542900 chr7D 88.750 80 9 0 512 591 602823976 602823897 2.250000e-16 99.0
34 TraesCS5A01G542900 chr7D 94.737 38 2 0 3517 3554 127225003 127225040 1.060000e-04 60.2
35 TraesCS5A01G542900 chr7D 92.857 42 1 2 624 663 139303314 139303355 1.060000e-04 60.2
36 TraesCS5A01G542900 chr3A 97.742 310 7 0 6806 7115 732774863 732775172 1.440000e-147 534.0
37 TraesCS5A01G542900 chr3A 97.411 309 8 0 6806 7114 732772553 732772861 2.420000e-145 527.0
38 TraesCS5A01G542900 chr3A 96.571 175 6 0 184 358 89152581 89152755 3.450000e-74 291.0
39 TraesCS5A01G542900 chr3A 95.506 178 5 3 181 358 370246061 370245887 2.080000e-71 281.0
40 TraesCS5A01G542900 chr3A 86.364 66 7 2 599 662 549273114 549273049 4.900000e-08 71.3
41 TraesCS5A01G542900 chr4A 94.083 338 19 1 6778 7114 18292402 18292065 6.770000e-141 512.0
42 TraesCS5A01G542900 chr4A 94.083 338 17 3 6778 7114 219178764 219178429 2.430000e-140 510.0
43 TraesCS5A01G542900 chr4A 96.133 181 6 1 181 360 464567605 464567425 2.670000e-75 294.0
44 TraesCS5A01G542900 chr4A 92.683 41 1 2 624 662 449812768 449812808 3.810000e-04 58.4
45 TraesCS5A01G542900 chr2A 93.195 338 22 1 6778 7114 122903865 122903528 6.820000e-136 496.0
46 TraesCS5A01G542900 chr2A 79.866 149 19 9 512 652 1492797 1492942 2.250000e-16 99.0
47 TraesCS5A01G542900 chr2A 81.034 116 16 2 3886 3995 71442516 71442631 4.860000e-13 87.9
48 TraesCS5A01G542900 chr2A 86.207 58 8 0 105 162 374130190 374130133 8.190000e-06 63.9
49 TraesCS5A01G542900 chr3B 95.506 178 7 1 184 360 18858789 18858966 5.780000e-72 283.0
50 TraesCS5A01G542900 chr3B 90.323 62 5 1 90 151 456608056 456608116 8.130000e-11 80.5
51 TraesCS5A01G542900 chr6A 93.617 188 11 1 176 363 469845408 469845222 7.470000e-71 279.0
52 TraesCS5A01G542900 chr6A 93.989 183 9 2 181 362 560082592 560082773 9.670000e-70 276.0
53 TraesCS5A01G542900 chr6A 91.837 196 12 4 187 380 96716123 96715930 4.500000e-68 270.0
54 TraesCS5A01G542900 chr3D 81.176 255 45 2 1332 1586 561754597 561754848 1.660000e-47 202.0
55 TraesCS5A01G542900 chr3D 91.463 82 6 1 511 591 603582512 603582593 2.880000e-20 111.0
56 TraesCS5A01G542900 chr7B 78.986 276 38 8 1206 1480 286835503 286835759 4.690000e-38 171.0
57 TraesCS5A01G542900 chr7B 83.824 68 6 4 74 139 322007447 322007511 1.060000e-04 60.2
58 TraesCS5A01G542900 chrUn 90.244 82 6 2 511 591 261625659 261625739 1.340000e-18 106.0
59 TraesCS5A01G542900 chrUn 90.123 81 7 1 512 591 89802981 89803061 4.830000e-18 104.0
60 TraesCS5A01G542900 chr2D 89.157 83 9 0 509 591 340269745 340269827 4.830000e-18 104.0
61 TraesCS5A01G542900 chr2D 90.385 52 4 1 90 141 448377098 448377148 6.330000e-07 67.6
62 TraesCS5A01G542900 chr1A 90.123 81 7 1 512 591 573385609 573385689 4.830000e-18 104.0
63 TraesCS5A01G542900 chr1A 89.024 82 7 2 511 591 13280315 13280235 6.240000e-17 100.0
64 TraesCS5A01G542900 chr5D 89.231 65 5 2 599 661 302098262 302098326 8.130000e-11 80.5
65 TraesCS5A01G542900 chr5D 87.500 64 7 1 94 157 488883758 488883696 1.360000e-08 73.1
66 TraesCS5A01G542900 chr5D 89.796 49 3 2 616 662 377311767 377311815 2.950000e-05 62.1
67 TraesCS5A01G542900 chr5D 86.792 53 5 2 612 662 2659931 2659983 3.810000e-04 58.4
68 TraesCS5A01G542900 chr2B 90.566 53 3 2 612 662 229183477 229183529 1.760000e-07 69.4
69 TraesCS5A01G542900 chr2B 91.304 46 2 2 617 660 459249133 459249088 2.950000e-05 62.1
70 TraesCS5A01G542900 chr6D 90.000 50 4 1 90 139 396532037 396532085 8.190000e-06 63.9
71 TraesCS5A01G542900 chr6B 84.375 64 6 4 78 139 618573614 618573675 1.060000e-04 60.2
72 TraesCS5A01G542900 chr1D 97.059 34 0 1 630 662 447562991 447562958 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G542900 chr5A 698628330 698638100 9770 False 8706.0 14643 100.000000 1 9771 2 chr5A.!!$F4 9770
1 TraesCS5A01G542900 chr4B 656902537 656912236 9699 True 1695.4 5845 91.654429 4 9771 7 chr4B.!!$R3 9767
2 TraesCS5A01G542900 chr4D 509818352 509828281 9929 False 1044.5 5221 90.904500 57 9771 10 chr4D.!!$F2 9714
3 TraesCS5A01G542900 chr7D 127222748 127227244 4496 False 259.8 558 84.971000 3266 4285 4 chr7D.!!$F2 1019
4 TraesCS5A01G542900 chr3A 732772553 732775172 2619 False 530.5 534 97.576500 6806 7115 2 chr3A.!!$F2 309

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 1214 0.395724 TATGCCGGCTCAGTCTCTCA 60.396 55.000 29.70 2.45 0.00 3.27 F
705 1275 0.439985 GTGCACGCATCTGTACTGTG 59.560 55.000 0.00 0.00 0.00 3.66 F
1963 2743 0.317160 CACGGCTGTCAAGGACACTA 59.683 55.000 0.00 0.00 37.67 2.74 F
2072 2852 0.103937 CTCCTGCGAATCCCTGAGAC 59.896 60.000 0.00 0.00 0.00 3.36 F
2457 3237 0.958091 CCGTGAATCCAAAGGTTGCA 59.042 50.000 0.00 0.00 0.00 4.08 F
3589 4586 1.333619 GCACACGGAGACAACAACAAT 59.666 47.619 0.00 0.00 0.00 2.71 F
5104 8852 1.077915 GTTGAGCTTCTGAGAGCAGC 58.922 55.000 12.20 0.00 45.12 5.25 F
5793 9550 0.038343 CGGATTGCACCCCTTGTTTG 60.038 55.000 0.00 0.00 0.00 2.93 F
6788 10779 0.105224 TATGACCGTGTTATGGCCGG 59.895 55.000 0.00 0.00 46.93 6.13 F
6794 10785 0.461339 CGTGTTATGGCCGGCTTAGT 60.461 55.000 28.56 12.31 0.00 2.24 F
7193 13507 0.548510 AAGATGGGCTGGCTAGGTTC 59.451 55.000 0.00 0.00 0.00 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1713 2493 0.033011 ACACATCTAGGGCGGAGAGT 60.033 55.000 0.00 0.00 0.00 3.24 R
2072 2852 0.247185 GTTCATGCCATGTGGGTTGG 59.753 55.000 4.31 0.00 39.65 3.77 R
2921 3702 0.882927 AGCGAGCAAGCGTAACCAAA 60.883 50.000 0.00 0.00 43.00 3.28 R
3135 3923 1.901591 AGGTGCAGATTCAAGTGTGG 58.098 50.000 0.00 0.00 0.00 4.17 R
4123 7205 1.609208 GGTGCAAAGCAAGGAGAGAA 58.391 50.000 0.00 0.00 41.47 2.87 R
5528 9285 1.174783 AGTGCACTAGGACAGGTACG 58.825 55.000 20.16 0.00 38.75 3.67 R
6254 10237 0.179702 CCTGAGATAAGGCTGCTGCA 59.820 55.000 17.89 0.88 41.91 4.41 R
7619 13982 0.177373 GGAAGCCCGGTTACTACAGG 59.823 60.000 0.00 0.00 39.11 4.00 R
8503 15037 1.134848 GCTGCTCTTCTCCACCAGTAG 60.135 57.143 0.00 0.00 0.00 2.57 R
8556 15093 1.276138 TCATGTCGTCTGGTTCATGCT 59.724 47.619 0.00 0.00 37.95 3.79 R
9016 15672 0.321298 TGACGCTAGGCCTCCAAAAC 60.321 55.000 9.68 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 657 9.533253 CTTGTGAAAATGTTTCCTGTAAAATCT 57.467 29.630 0.00 0.00 0.00 2.40
129 683 7.481275 AAAATATGCAGAAAACAACAACTGG 57.519 32.000 0.00 0.00 0.00 4.00
136 690 0.823460 AAACAACAACTGGCACTGGG 59.177 50.000 0.00 0.00 0.00 4.45
151 705 6.132658 TGGCACTGGGCATTTAATTAATAGA 58.867 36.000 3.46 0.00 45.76 1.98
193 751 6.819397 AATAAAAGACAGCAAACTACTCCC 57.181 37.500 0.00 0.00 0.00 4.30
194 752 4.439253 AAAAGACAGCAAACTACTCCCT 57.561 40.909 0.00 0.00 0.00 4.20
195 753 3.686916 AAGACAGCAAACTACTCCCTC 57.313 47.619 0.00 0.00 0.00 4.30
196 754 1.903183 AGACAGCAAACTACTCCCTCC 59.097 52.381 0.00 0.00 0.00 4.30
197 755 0.608640 ACAGCAAACTACTCCCTCCG 59.391 55.000 0.00 0.00 0.00 4.63
198 756 0.608640 CAGCAAACTACTCCCTCCGT 59.391 55.000 0.00 0.00 0.00 4.69
199 757 1.002087 CAGCAAACTACTCCCTCCGTT 59.998 52.381 0.00 0.00 0.00 4.44
200 758 1.275573 AGCAAACTACTCCCTCCGTTC 59.724 52.381 0.00 0.00 0.00 3.95
201 759 1.675116 GCAAACTACTCCCTCCGTTCC 60.675 57.143 0.00 0.00 0.00 3.62
202 760 1.900486 CAAACTACTCCCTCCGTTCCT 59.100 52.381 0.00 0.00 0.00 3.36
203 761 3.094572 CAAACTACTCCCTCCGTTCCTA 58.905 50.000 0.00 0.00 0.00 2.94
204 762 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
205 763 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
206 764 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
207 765 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
208 766 4.892345 ACTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
209 767 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
210 768 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
211 769 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
212 770 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
213 771 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
214 772 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
215 773 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
216 774 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
217 775 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
218 776 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
219 777 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
220 778 8.587608 TCCGTTCCTAAATACTTGTCTTTCTAA 58.412 33.333 0.00 0.00 0.00 2.10
221 779 8.870879 CCGTTCCTAAATACTTGTCTTTCTAAG 58.129 37.037 0.00 0.00 0.00 2.18
222 780 8.381387 CGTTCCTAAATACTTGTCTTTCTAAGC 58.619 37.037 0.00 0.00 0.00 3.09
223 781 9.216117 GTTCCTAAATACTTGTCTTTCTAAGCA 57.784 33.333 0.00 0.00 0.00 3.91
224 782 9.959721 TTCCTAAATACTTGTCTTTCTAAGCAT 57.040 29.630 0.00 0.00 0.00 3.79
225 783 9.959721 TCCTAAATACTTGTCTTTCTAAGCATT 57.040 29.630 0.00 0.00 0.00 3.56
230 788 9.899226 AATACTTGTCTTTCTAAGCATTTCAAC 57.101 29.630 0.00 0.00 0.00 3.18
231 789 7.333528 ACTTGTCTTTCTAAGCATTTCAACA 57.666 32.000 0.00 0.00 0.00 3.33
232 790 7.771183 ACTTGTCTTTCTAAGCATTTCAACAA 58.229 30.769 0.00 0.00 0.00 2.83
233 791 7.917505 ACTTGTCTTTCTAAGCATTTCAACAAG 59.082 33.333 0.00 0.00 43.26 3.16
234 792 7.333528 TGTCTTTCTAAGCATTTCAACAAGT 57.666 32.000 0.00 0.00 0.00 3.16
235 793 7.195646 TGTCTTTCTAAGCATTTCAACAAGTG 58.804 34.615 0.00 0.00 0.00 3.16
236 794 7.066887 TGTCTTTCTAAGCATTTCAACAAGTGA 59.933 33.333 0.00 0.00 0.00 3.41
237 795 7.377131 GTCTTTCTAAGCATTTCAACAAGTGAC 59.623 37.037 0.00 0.00 35.39 3.67
238 796 6.942532 TTCTAAGCATTTCAACAAGTGACT 57.057 33.333 0.00 0.00 35.39 3.41
239 797 8.445275 TTTCTAAGCATTTCAACAAGTGACTA 57.555 30.769 0.00 0.00 35.39 2.59
240 798 7.421530 TCTAAGCATTTCAACAAGTGACTAC 57.578 36.000 0.00 0.00 35.39 2.73
241 799 6.989759 TCTAAGCATTTCAACAAGTGACTACA 59.010 34.615 0.00 0.00 35.39 2.74
242 800 6.639632 AAGCATTTCAACAAGTGACTACAT 57.360 33.333 0.00 0.00 35.39 2.29
243 801 7.744087 AAGCATTTCAACAAGTGACTACATA 57.256 32.000 0.00 0.00 35.39 2.29
244 802 7.928307 AGCATTTCAACAAGTGACTACATAT 57.072 32.000 0.00 0.00 35.39 1.78
245 803 7.755591 AGCATTTCAACAAGTGACTACATATG 58.244 34.615 0.00 0.00 35.39 1.78
246 804 6.968904 GCATTTCAACAAGTGACTACATATGG 59.031 38.462 7.80 0.00 35.39 2.74
247 805 7.148255 GCATTTCAACAAGTGACTACATATGGA 60.148 37.037 7.80 0.00 35.39 3.41
248 806 7.905604 TTTCAACAAGTGACTACATATGGAG 57.094 36.000 13.77 13.77 35.39 3.86
249 807 5.419542 TCAACAAGTGACTACATATGGAGC 58.580 41.667 15.30 8.47 0.00 4.70
250 808 5.046663 TCAACAAGTGACTACATATGGAGCA 60.047 40.000 15.30 10.95 0.00 4.26
251 809 5.420725 ACAAGTGACTACATATGGAGCAA 57.579 39.130 15.30 0.16 0.00 3.91
252 810 5.804639 ACAAGTGACTACATATGGAGCAAA 58.195 37.500 15.30 0.00 0.00 3.68
253 811 6.237901 ACAAGTGACTACATATGGAGCAAAA 58.762 36.000 15.30 0.00 0.00 2.44
254 812 6.886459 ACAAGTGACTACATATGGAGCAAAAT 59.114 34.615 15.30 0.00 0.00 1.82
255 813 6.932356 AGTGACTACATATGGAGCAAAATG 57.068 37.500 15.30 0.00 0.00 2.32
256 814 6.653020 AGTGACTACATATGGAGCAAAATGA 58.347 36.000 15.30 0.00 0.00 2.57
257 815 6.765036 AGTGACTACATATGGAGCAAAATGAG 59.235 38.462 15.30 0.00 0.00 2.90
258 816 6.540189 GTGACTACATATGGAGCAAAATGAGT 59.460 38.462 15.30 0.00 0.00 3.41
259 817 6.539826 TGACTACATATGGAGCAAAATGAGTG 59.460 38.462 15.30 0.00 0.00 3.51
260 818 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
261 819 7.112122 ACTACATATGGAGCAAAATGAGTGAA 58.888 34.615 15.30 0.00 0.00 3.18
262 820 7.776969 ACTACATATGGAGCAAAATGAGTGAAT 59.223 33.333 15.30 0.00 0.00 2.57
263 821 7.035840 ACATATGGAGCAAAATGAGTGAATC 57.964 36.000 7.80 0.00 0.00 2.52
264 822 6.832384 ACATATGGAGCAAAATGAGTGAATCT 59.168 34.615 7.80 0.00 0.00 2.40
265 823 7.994911 ACATATGGAGCAAAATGAGTGAATCTA 59.005 33.333 7.80 0.00 0.00 1.98
266 824 6.690194 ATGGAGCAAAATGAGTGAATCTAC 57.310 37.500 0.00 0.00 0.00 2.59
267 825 5.559770 TGGAGCAAAATGAGTGAATCTACA 58.440 37.500 0.00 0.00 0.00 2.74
268 826 5.412594 TGGAGCAAAATGAGTGAATCTACAC 59.587 40.000 0.00 0.00 40.60 2.90
341 899 8.703604 TCTAGAAAGACAAATATTCAGGAACG 57.296 34.615 0.00 0.00 0.00 3.95
342 900 6.743575 AGAAAGACAAATATTCAGGAACGG 57.256 37.500 0.00 0.00 0.00 4.44
343 901 6.472887 AGAAAGACAAATATTCAGGAACGGA 58.527 36.000 0.00 0.00 0.00 4.69
344 902 6.595716 AGAAAGACAAATATTCAGGAACGGAG 59.404 38.462 0.00 0.00 31.97 4.63
345 903 4.770795 AGACAAATATTCAGGAACGGAGG 58.229 43.478 0.00 0.00 31.97 4.30
346 904 3.877508 GACAAATATTCAGGAACGGAGGG 59.122 47.826 0.00 0.00 31.97 4.30
347 905 3.521937 ACAAATATTCAGGAACGGAGGGA 59.478 43.478 0.00 0.00 31.97 4.20
348 906 4.130118 CAAATATTCAGGAACGGAGGGAG 58.870 47.826 0.00 0.00 31.97 4.30
359 917 7.395489 TCAGGAACGGAGGGAGTATATAATAAC 59.605 40.741 0.00 0.00 0.00 1.89
361 919 7.731688 AGGAACGGAGGGAGTATATAATAACAA 59.268 37.037 0.00 0.00 0.00 2.83
428 989 5.283717 CGAAAAGAATCACATGCTTAAACCG 59.716 40.000 0.00 0.00 0.00 4.44
429 990 5.705609 AAAGAATCACATGCTTAAACCGT 57.294 34.783 0.00 0.00 0.00 4.83
444 1005 6.369615 GCTTAAACCGTCCATACAAAGAACTA 59.630 38.462 0.00 0.00 0.00 2.24
447 1008 6.796705 AACCGTCCATACAAAGAACTAAAG 57.203 37.500 0.00 0.00 0.00 1.85
465 1026 5.758784 ACTAAAGTTCCTAGCACAAACACTC 59.241 40.000 0.00 0.00 0.00 3.51
469 1030 3.838244 TCCTAGCACAAACACTCAACT 57.162 42.857 0.00 0.00 0.00 3.16
475 1036 2.477863 GCACAAACACTCAACTCGCTTT 60.478 45.455 0.00 0.00 0.00 3.51
481 1042 2.538449 ACACTCAACTCGCTTTTACACG 59.462 45.455 0.00 0.00 0.00 4.49
490 1051 2.997303 TCGCTTTTACACGCACATGTAT 59.003 40.909 0.00 0.00 35.04 2.29
492 1053 3.538003 CGCTTTTACACGCACATGTATTG 59.462 43.478 0.00 0.00 35.04 1.90
493 1054 4.472286 GCTTTTACACGCACATGTATTGT 58.528 39.130 0.00 4.72 39.91 2.71
516 1077 9.853555 TTGTGAATATTTCATTTTAGTGCGAAT 57.146 25.926 0.00 0.00 42.47 3.34
539 1100 1.646912 TCGGTGGTTGGATGGTTAGA 58.353 50.000 0.00 0.00 0.00 2.10
554 1115 4.422057 TGGTTAGAAGGACAGTGGTATCA 58.578 43.478 0.00 0.00 0.00 2.15
556 1117 4.222145 GGTTAGAAGGACAGTGGTATCACA 59.778 45.833 9.22 0.00 45.91 3.58
591 1152 1.826385 AGTCCTGGTGCTTGCATTAC 58.174 50.000 0.00 0.00 0.00 1.89
596 1157 3.054434 TCCTGGTGCTTGCATTACTGTAT 60.054 43.478 0.00 0.00 0.00 2.29
614 1175 1.563924 ATTACGAGGCACCTGTGGTA 58.436 50.000 0.00 0.00 32.11 3.25
653 1214 0.395724 TATGCCGGCTCAGTCTCTCA 60.396 55.000 29.70 2.45 0.00 3.27
678 1248 0.670546 GCTAGGATGTGCGTGTGTGT 60.671 55.000 0.00 0.00 0.00 3.72
680 1250 1.726791 CTAGGATGTGCGTGTGTGTTC 59.273 52.381 0.00 0.00 0.00 3.18
688 1258 3.416490 GTGTGTGTTCACGGGGTG 58.584 61.111 0.00 0.00 46.49 4.61
689 1259 2.515057 TGTGTGTTCACGGGGTGC 60.515 61.111 0.00 0.00 46.49 5.01
691 1261 2.515057 TGTGTTCACGGGGTGCAC 60.515 61.111 8.80 8.80 32.98 4.57
692 1262 3.645975 GTGTTCACGGGGTGCACG 61.646 66.667 11.45 1.58 32.75 5.34
695 1265 4.634703 TTCACGGGGTGCACGCAT 62.635 61.111 31.75 18.49 32.98 4.73
700 1270 2.267642 GGGGTGCACGCATCTGTA 59.732 61.111 31.75 0.00 0.00 2.74
701 1271 2.106683 GGGGTGCACGCATCTGTAC 61.107 63.158 31.75 11.69 0.00 2.90
703 1273 1.361668 GGGTGCACGCATCTGTACTG 61.362 60.000 27.25 0.00 0.00 2.74
705 1275 0.439985 GTGCACGCATCTGTACTGTG 59.560 55.000 0.00 0.00 0.00 3.66
707 1277 1.148310 GCACGCATCTGTACTGTGTT 58.852 50.000 0.00 0.00 35.26 3.32
708 1278 2.288518 TGCACGCATCTGTACTGTGTTA 60.289 45.455 0.00 0.00 35.26 2.41
709 1279 2.734606 GCACGCATCTGTACTGTGTTAA 59.265 45.455 0.00 0.00 35.26 2.01
710 1280 3.185594 GCACGCATCTGTACTGTGTTAAA 59.814 43.478 0.00 0.00 35.26 1.52
711 1281 4.319190 GCACGCATCTGTACTGTGTTAAAA 60.319 41.667 0.00 0.00 35.26 1.52
712 1282 5.743467 CACGCATCTGTACTGTGTTAAAAA 58.257 37.500 0.00 0.00 35.26 1.94
770 1507 8.604035 CAATTTTACTAGGTAGTGCAGTGTATG 58.396 37.037 3.69 0.00 37.10 2.39
771 1508 6.845758 TTTACTAGGTAGTGCAGTGTATGT 57.154 37.500 3.69 0.00 37.10 2.29
772 1509 7.943079 TTTACTAGGTAGTGCAGTGTATGTA 57.057 36.000 3.69 0.00 37.10 2.29
773 1510 5.831702 ACTAGGTAGTGCAGTGTATGTAC 57.168 43.478 3.69 0.00 44.20 2.90
774 1511 5.258841 ACTAGGTAGTGCAGTGTATGTACA 58.741 41.667 3.69 0.00 46.08 2.90
775 1512 4.720649 AGGTAGTGCAGTGTATGTACAG 57.279 45.455 3.69 0.00 46.08 2.74
776 1513 4.087182 AGGTAGTGCAGTGTATGTACAGT 58.913 43.478 3.69 0.00 46.08 3.55
777 1514 5.258841 AGGTAGTGCAGTGTATGTACAGTA 58.741 41.667 3.69 0.00 46.08 2.74
778 1515 5.892119 AGGTAGTGCAGTGTATGTACAGTAT 59.108 40.000 3.69 0.00 46.08 2.12
784 1521 9.667107 AGTGCAGTGTATGTACAGTATAATTTT 57.333 29.630 0.33 0.00 46.08 1.82
820 1564 0.764890 TGTTGGGTGGTCTTCTCCTG 59.235 55.000 0.00 0.00 0.00 3.86
923 1694 2.317609 CGTGAAACCCAGCTGACCG 61.318 63.158 17.39 4.47 0.00 4.79
924 1695 2.281484 TGAAACCCAGCTGACCGC 60.281 61.111 17.39 0.79 39.57 5.68
956 1727 3.992317 GACTAGATCGGCCGGCCC 61.992 72.222 39.24 25.51 0.00 5.80
1878 2658 1.228675 CAACTCCAGGGGCAAGCTT 60.229 57.895 0.00 0.00 0.00 3.74
1963 2743 0.317160 CACGGCTGTCAAGGACACTA 59.683 55.000 0.00 0.00 37.67 2.74
1968 2748 2.500098 GGCTGTCAAGGACACTATGGTA 59.500 50.000 0.00 0.00 37.67 3.25
2004 2784 2.770587 CTTCGAGTGGCAAGCGCAAC 62.771 60.000 11.47 0.00 43.04 4.17
2064 2844 4.844420 CAGTCCCTCCTGCGAATC 57.156 61.111 0.00 0.00 0.00 2.52
2067 2847 2.066999 GTCCCTCCTGCGAATCCCT 61.067 63.158 0.00 0.00 0.00 4.20
2072 2852 0.103937 CTCCTGCGAATCCCTGAGAC 59.896 60.000 0.00 0.00 0.00 3.36
2327 3107 2.620585 AGTCTGAAGCTGCAAAGGTTTC 59.379 45.455 1.02 0.00 0.00 2.78
2366 3146 9.208022 TCATATGCAAGCTATAGTTGTATCAAC 57.792 33.333 16.06 4.69 33.08 3.18
2367 3147 6.867662 ATGCAAGCTATAGTTGTATCAACC 57.132 37.500 8.68 0.00 0.00 3.77
2391 3171 7.501559 ACCTTCAAGCTATAGTAGTGACGATAA 59.498 37.037 0.84 0.00 0.00 1.75
2457 3237 0.958091 CCGTGAATCCAAAGGTTGCA 59.042 50.000 0.00 0.00 0.00 4.08
2511 3291 4.085357 ACTCACTAACATGGCAAAGTCA 57.915 40.909 0.00 0.00 0.00 3.41
2682 3462 1.704641 TATCAGGTGGCTATCGCAGT 58.295 50.000 0.00 0.00 38.10 4.40
2840 3621 4.275689 TGTTGTTGCTGTTGTTATCAGGAG 59.724 41.667 0.00 0.00 34.99 3.69
2999 3780 8.367156 ACACACACCTTGCTTTTAATGAATAAT 58.633 29.630 0.00 0.00 0.00 1.28
3000 3781 9.853555 CACACACCTTGCTTTTAATGAATAATA 57.146 29.630 0.00 0.00 0.00 0.98
3021 3802 9.965824 ATAATAACATGTACCTTGCTTTAATGC 57.034 29.630 0.00 6.39 0.00 3.56
3022 3803 5.982890 AACATGTACCTTGCTTTAATGCT 57.017 34.783 13.80 0.00 0.00 3.79
3024 3805 5.954335 ACATGTACCTTGCTTTAATGCTTC 58.046 37.500 13.80 0.88 0.00 3.86
3025 3806 5.711976 ACATGTACCTTGCTTTAATGCTTCT 59.288 36.000 13.80 0.00 0.00 2.85
3026 3807 6.884295 ACATGTACCTTGCTTTAATGCTTCTA 59.116 34.615 13.80 0.00 0.00 2.10
3093 3881 5.440610 CCCCTTGTATTCAGCTGAATAAGT 58.559 41.667 38.22 23.58 45.39 2.24
3135 3923 3.440415 GGTGCTTGGCCGGTTAGC 61.440 66.667 14.98 14.98 35.50 3.09
3183 3972 5.779529 AAAATCATGTCTTGTCTGCACTT 57.220 34.783 0.00 0.00 0.00 3.16
3392 4182 4.274214 CACAGATTTCTTGTGCTGACAGAA 59.726 41.667 6.65 0.00 32.26 3.02
3413 4203 7.498570 ACAGAATTGAATCTTCTAATGAGCTCC 59.501 37.037 12.15 0.00 31.82 4.70
3430 4221 4.740902 AGCTCCCAAATTCCTACTGTTTT 58.259 39.130 0.00 0.00 0.00 2.43
3589 4586 1.333619 GCACACGGAGACAACAACAAT 59.666 47.619 0.00 0.00 0.00 2.71
3746 4749 5.817816 ACGTCACATATTTCTCCTTGAATCC 59.182 40.000 0.00 0.00 34.24 3.01
3918 6802 9.920133 TTATATTCTCTGCATCTATTGTGAGTC 57.080 33.333 0.00 0.00 33.11 3.36
3984 7060 3.499745 GGGGGAGCTGAGTTAAAGGAAAA 60.500 47.826 0.00 0.00 0.00 2.29
4111 7191 2.751259 TGCAAGAGAAGCATGAATCACC 59.249 45.455 0.00 0.00 37.02 4.02
4117 7197 7.596494 CAAGAGAAGCATGAATCACCTTTTTA 58.404 34.615 0.00 0.00 0.00 1.52
4119 7199 6.716628 AGAGAAGCATGAATCACCTTTTTACA 59.283 34.615 0.00 0.00 0.00 2.41
4123 7205 7.472334 AGCATGAATCACCTTTTTACATCTT 57.528 32.000 0.00 0.00 0.00 2.40
4224 7307 8.567948 TCTTTCCTTAACACAAATGACTCAATC 58.432 33.333 0.00 0.00 0.00 2.67
4225 7308 7.815840 TTCCTTAACACAAATGACTCAATCA 57.184 32.000 0.00 0.00 43.13 2.57
4226 7309 7.202016 TCCTTAACACAAATGACTCAATCAC 57.798 36.000 0.00 0.00 41.24 3.06
4227 7310 6.998074 TCCTTAACACAAATGACTCAATCACT 59.002 34.615 0.00 0.00 41.24 3.41
4228 7311 7.173218 TCCTTAACACAAATGACTCAATCACTC 59.827 37.037 0.00 0.00 41.24 3.51
4229 7312 7.041167 CCTTAACACAAATGACTCAATCACTCA 60.041 37.037 0.00 0.00 41.24 3.41
4230 7313 6.698008 AACACAAATGACTCAATCACTCAA 57.302 33.333 0.00 0.00 41.24 3.02
4231 7314 6.889301 ACACAAATGACTCAATCACTCAAT 57.111 33.333 0.00 0.00 41.24 2.57
4241 7328 8.154203 TGACTCAATCACTCAATTGTTTAGGTA 58.846 33.333 5.13 0.00 37.77 3.08
4358 7462 4.494350 ACTGAATTGATGGCATTATCGC 57.506 40.909 0.00 0.00 0.00 4.58
4409 7608 4.938226 GCTATACTCTGTTTTGGCTTGACT 59.062 41.667 0.00 0.00 0.00 3.41
4645 8366 7.495901 AGAGATGACAGTCATGTAATACCTTG 58.504 38.462 21.26 0.00 40.68 3.61
4649 8370 4.517285 ACAGTCATGTAATACCTTGCTGG 58.483 43.478 0.00 0.00 38.09 4.85
4732 8453 7.576477 GCTCCATTATTTGCTTTGAACTCTTCT 60.576 37.037 0.00 0.00 0.00 2.85
4733 8454 7.596494 TCCATTATTTGCTTTGAACTCTTCTG 58.404 34.615 0.00 0.00 0.00 3.02
4737 8458 8.902540 TTATTTGCTTTGAACTCTTCTGTCTA 57.097 30.769 0.00 0.00 0.00 2.59
4764 8485 1.747355 GATGTGCTGGATTGGAAGTGG 59.253 52.381 0.00 0.00 0.00 4.00
4816 8537 5.420725 TGATCCTGCTGCTAACTTTTCTA 57.579 39.130 0.00 0.00 0.00 2.10
4821 8542 4.337763 CTGCTGCTAACTTTTCTATTGCG 58.662 43.478 0.00 0.00 0.00 4.85
4850 8571 2.143876 TTGCTATTGGAAGGGAAGGC 57.856 50.000 0.00 0.00 0.00 4.35
4913 8634 5.871524 TGAAGTAAGTGCTGCTTATCTTCAG 59.128 40.000 22.63 0.00 43.20 3.02
4924 8645 2.768253 TATCTTCAGTGCACCCAGTG 57.232 50.000 14.63 5.23 42.55 3.66
4975 8712 6.183360 ACACTGACATGCCTTAAACAAAATCA 60.183 34.615 0.00 0.00 0.00 2.57
4984 8721 7.946207 TGCCTTAAACAAAATCACATGTTCTA 58.054 30.769 0.00 0.00 38.75 2.10
4998 8739 5.678483 CACATGTTCTATTGCTATTTGCGTC 59.322 40.000 0.00 0.00 46.63 5.19
5051 8799 3.514777 CACCGATGCAGTGTACTGT 57.485 52.632 13.08 0.00 45.45 3.55
5055 8803 2.496070 ACCGATGCAGTGTACTGTATGT 59.504 45.455 18.20 9.51 46.76 2.29
5063 8811 7.795482 TGCAGTGTACTGTATGTTTAGTTTT 57.205 32.000 13.08 0.00 45.45 2.43
5104 8852 1.077915 GTTGAGCTTCTGAGAGCAGC 58.922 55.000 12.20 0.00 45.12 5.25
5114 8862 3.303049 TCTGAGAGCAGCCTTATGATCA 58.697 45.455 0.00 0.00 42.01 2.92
5147 8903 5.690865 TCCTTGTCCAGTTATGTTTGAAGT 58.309 37.500 0.00 0.00 0.00 3.01
5158 8914 4.918810 ATGTTTGAAGTTTGTGACCCTC 57.081 40.909 0.00 0.00 0.00 4.30
5206 8962 8.721478 TGAACTTTATGTAGCTGATTTCTTGAC 58.279 33.333 0.00 0.00 0.00 3.18
5216 8972 7.472334 AGCTGATTTCTTGACCAATATTGTT 57.528 32.000 14.25 0.00 0.00 2.83
5250 9006 7.775120 CAAGATTAAGTTCTTGCCACCATAAT 58.225 34.615 6.00 0.00 44.30 1.28
5265 9021 7.094377 TGCCACCATAATACTCTTTTCTTGAAC 60.094 37.037 0.00 0.00 0.00 3.18
5287 9043 3.126831 CTCGATGATGCCCTTAGTTCAC 58.873 50.000 0.00 0.00 0.00 3.18
5373 9130 5.843969 TGCATCCTTTGATATCCAGTACCTA 59.156 40.000 0.00 0.00 0.00 3.08
5528 9285 0.378610 GCATAGTTGAAGAAGGCGGC 59.621 55.000 0.00 0.00 0.00 6.53
5625 9382 7.342581 TGCTTATATGTTTGATGGAAGGTACA 58.657 34.615 0.00 0.00 0.00 2.90
5695 9452 8.514594 ACAAGTCATGACAAAACATACCATAAG 58.485 33.333 27.02 2.24 0.00 1.73
5719 9476 6.372659 AGTCAGTTGTTTTCACCATATGCTAG 59.627 38.462 0.00 0.00 0.00 3.42
5746 9503 5.954335 ACTTTGTTGAAGTATATGCAAGCC 58.046 37.500 0.00 0.00 46.61 4.35
5793 9550 0.038343 CGGATTGCACCCCTTGTTTG 60.038 55.000 0.00 0.00 0.00 2.93
5806 9563 6.209391 CACCCCTTGTTTGATATCTGAAAAGT 59.791 38.462 3.98 0.00 0.00 2.66
5841 9748 4.771114 TGCTACATGCCAGTATAAAGGT 57.229 40.909 0.00 0.00 42.00 3.50
5925 9832 5.648526 GTCACTCTTCCTCACACACTAGATA 59.351 44.000 0.00 0.00 0.00 1.98
5952 9900 5.018809 TCTTCCAAATTATGCCTCTTTGCT 58.981 37.500 0.00 0.00 0.00 3.91
5953 9901 5.481473 TCTTCCAAATTATGCCTCTTTGCTT 59.519 36.000 0.00 0.00 0.00 3.91
5974 9922 6.043127 TGCTTTATGGTCTCCATATCTGCTTA 59.957 38.462 18.56 6.79 44.71 3.09
6013 9961 3.808466 TTCTGTAGTATGGCTGCTGAG 57.192 47.619 0.00 0.00 38.51 3.35
6015 9963 2.954989 TCTGTAGTATGGCTGCTGAGAG 59.045 50.000 0.00 0.00 34.12 3.20
6017 9965 3.365472 TGTAGTATGGCTGCTGAGAGAA 58.635 45.455 0.00 0.00 0.00 2.87
6018 9966 3.382865 TGTAGTATGGCTGCTGAGAGAAG 59.617 47.826 0.00 0.00 0.00 2.85
6019 9967 1.761784 AGTATGGCTGCTGAGAGAAGG 59.238 52.381 0.00 0.00 0.00 3.46
6020 9968 1.759445 GTATGGCTGCTGAGAGAAGGA 59.241 52.381 0.00 0.00 0.00 3.36
6025 9973 3.264193 TGGCTGCTGAGAGAAGGAAAATA 59.736 43.478 0.00 0.00 0.00 1.40
6031 9979 5.356190 TGCTGAGAGAAGGAAAATATTGCAG 59.644 40.000 0.00 0.00 0.00 4.41
6032 9980 5.356470 GCTGAGAGAAGGAAAATATTGCAGT 59.644 40.000 0.00 0.00 0.00 4.40
6254 10237 1.606531 GGCTGCTTCATCCTCAGGT 59.393 57.895 0.00 0.00 0.00 4.00
6281 10264 2.573462 AGCCTTATCTCAGGTTGCTGAA 59.427 45.455 0.00 0.00 36.15 3.02
6345 10328 8.895737 GGTTTGATTTTGCATTCCATTGAATAT 58.104 29.630 0.00 0.00 39.20 1.28
6356 10339 7.914346 GCATTCCATTGAATATTATCAGCTAGC 59.086 37.037 6.62 6.62 39.20 3.42
6515 10503 5.888161 AGGATCAGTGGGATGATTTGTTTAC 59.112 40.000 0.00 0.00 40.02 2.01
6520 10508 8.877864 TCAGTGGGATGATTTGTTTACTTAAT 57.122 30.769 0.00 0.00 0.00 1.40
6542 10530 6.808008 ATGACCATGTCAAAGTTAGTTCTG 57.192 37.500 0.46 0.00 45.96 3.02
6575 10563 3.521126 AGCTCATCCATAATAGGCGGATT 59.479 43.478 0.00 0.00 37.44 3.01
6666 10654 8.514330 TTTATTTATGTAGTTGAGGGCGAAAT 57.486 30.769 0.00 0.00 0.00 2.17
6678 10668 6.636562 TGAGGGCGAAATAAGTTTGTTAAA 57.363 33.333 0.00 0.00 0.00 1.52
6679 10669 7.040473 TGAGGGCGAAATAAGTTTGTTAAAA 57.960 32.000 0.00 0.00 0.00 1.52
6684 10674 8.012809 GGGCGAAATAAGTTTGTTAAAATTTGG 58.987 33.333 0.00 0.00 30.58 3.28
6696 10686 6.908825 TGTTAAAATTTGGTCAGGATTCTCG 58.091 36.000 0.00 0.00 0.00 4.04
6768 10759 1.274728 CAGTCAGGAGTTGAGGTCTGG 59.725 57.143 0.00 0.00 36.21 3.86
6782 10773 3.814005 GGTCTGGTATGACCGTGTTAT 57.186 47.619 0.00 0.00 45.69 1.89
6783 10774 3.454375 GGTCTGGTATGACCGTGTTATG 58.546 50.000 0.00 0.00 45.69 1.90
6784 10775 3.454375 GTCTGGTATGACCGTGTTATGG 58.546 50.000 0.00 0.00 42.58 2.74
6785 10776 2.159014 TCTGGTATGACCGTGTTATGGC 60.159 50.000 0.00 0.00 42.58 4.40
6786 10777 1.134340 TGGTATGACCGTGTTATGGCC 60.134 52.381 0.00 0.00 42.58 5.36
6787 10778 1.214367 GTATGACCGTGTTATGGCCG 58.786 55.000 0.00 0.00 0.00 6.13
6788 10779 0.105224 TATGACCGTGTTATGGCCGG 59.895 55.000 0.00 0.00 46.93 6.13
6789 10780 3.199891 GACCGTGTTATGGCCGGC 61.200 66.667 21.18 21.18 45.49 6.13
6790 10781 3.675619 GACCGTGTTATGGCCGGCT 62.676 63.158 28.56 10.45 45.49 5.52
6791 10782 2.437716 CCGTGTTATGGCCGGCTT 60.438 61.111 28.56 16.98 34.62 4.35
6792 10783 1.153329 CCGTGTTATGGCCGGCTTA 60.153 57.895 28.56 16.71 34.62 3.09
6793 10784 1.157870 CCGTGTTATGGCCGGCTTAG 61.158 60.000 28.56 9.09 34.62 2.18
6794 10785 0.461339 CGTGTTATGGCCGGCTTAGT 60.461 55.000 28.56 12.31 0.00 2.24
6795 10786 1.746470 GTGTTATGGCCGGCTTAGTT 58.254 50.000 28.56 9.29 0.00 2.24
6796 10787 2.089201 GTGTTATGGCCGGCTTAGTTT 58.911 47.619 28.56 7.44 0.00 2.66
6797 10788 3.272581 GTGTTATGGCCGGCTTAGTTTA 58.727 45.455 28.56 4.95 0.00 2.01
6798 10789 3.881089 GTGTTATGGCCGGCTTAGTTTAT 59.119 43.478 28.56 11.57 0.00 1.40
6799 10790 5.058490 GTGTTATGGCCGGCTTAGTTTATA 58.942 41.667 28.56 10.62 0.00 0.98
6800 10791 5.704053 GTGTTATGGCCGGCTTAGTTTATAT 59.296 40.000 28.56 9.23 0.00 0.86
6801 10792 5.935789 TGTTATGGCCGGCTTAGTTTATATC 59.064 40.000 28.56 5.04 0.00 1.63
6802 10793 3.412237 TGGCCGGCTTAGTTTATATCC 57.588 47.619 28.56 4.81 0.00 2.59
6803 10794 2.289195 TGGCCGGCTTAGTTTATATCCG 60.289 50.000 28.56 0.00 36.90 4.18
7012 11003 2.203084 GCCTTTCCCCTAGCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
7017 11008 3.982316 TTCCCCTAGCTCGCGACGA 62.982 63.158 3.71 0.00 0.00 4.20
7117 13418 7.030075 GTAGAGTACTTGATTCTACCAGACC 57.970 44.000 0.00 0.00 40.06 3.85
7118 13419 4.641094 AGAGTACTTGATTCTACCAGACCG 59.359 45.833 0.00 0.00 0.00 4.79
7193 13507 0.548510 AAGATGGGCTGGCTAGGTTC 59.451 55.000 0.00 0.00 0.00 3.62
7202 13516 0.991146 TGGCTAGGTTCAGGAATGCA 59.009 50.000 0.00 0.00 0.00 3.96
7208 13522 1.648467 GGTTCAGGAATGCACCGAGC 61.648 60.000 0.00 0.00 45.96 5.03
7217 13531 3.257933 GCACCGAGCAGTGAAAGG 58.742 61.111 5.80 0.00 44.79 3.11
7245 13584 5.531634 AGTTATGTTTCCAAATGCTGTGTG 58.468 37.500 0.00 0.00 0.00 3.82
7290 13629 7.581213 AATGTGGACTATTTGTTCAAAGTGA 57.419 32.000 4.37 0.00 35.63 3.41
7312 13651 8.212995 AGTGATATCATGTGATAATGTGTTGGA 58.787 33.333 9.02 0.00 40.09 3.53
7575 13932 1.683385 GCTCTGCTTCAGGTTGGTTTT 59.317 47.619 0.00 0.00 31.51 2.43
7611 13974 4.023878 GCTAGTATGACTTGAGTCCCGTAG 60.024 50.000 8.56 5.87 44.15 3.51
7619 13982 3.005578 ACTTGAGTCCCGTAGTTGTCTTC 59.994 47.826 0.00 0.00 0.00 2.87
7630 13993 5.397326 CGTAGTTGTCTTCCTGTAGTAACC 58.603 45.833 0.00 0.00 0.00 2.85
7661 14024 2.260844 TGCATAAGGAGCATGCCTAC 57.739 50.000 15.66 4.79 46.65 3.18
7705 14068 5.343307 ACTTTGTCAAGTTTCCAGCATTT 57.657 34.783 0.00 0.00 40.66 2.32
7829 14351 5.450965 GGGGATGCATGCATATATGTTTAGC 60.451 44.000 32.27 15.55 36.70 3.09
7853 14375 2.634940 TGCCTCTGTTTCTAGCTCTTGT 59.365 45.455 0.00 0.00 0.00 3.16
7904 14435 7.279981 ACATGATTTGAAGCAAATGATCAATGG 59.720 33.333 9.85 0.00 43.05 3.16
7927 14458 1.188863 ATTCAAACCTGCCTCCATGC 58.811 50.000 0.00 0.00 0.00 4.06
8309 14840 1.745115 GCAGTTCACTATGCCGGCA 60.745 57.895 34.80 34.80 36.41 5.69
8548 15085 7.270832 TGACCTATTTATTCCCCCATATCTG 57.729 40.000 0.00 0.00 0.00 2.90
8556 15093 0.846015 CCCCCATATCTGTGGCTTCA 59.154 55.000 0.00 0.00 37.96 3.02
8603 15209 1.392168 TCGTCGTCGAATTTTGGCATC 59.608 47.619 1.37 0.00 43.34 3.91
8608 15214 0.334676 TCGAATTTTGGCATCCCCCT 59.665 50.000 0.00 0.00 0.00 4.79
8611 15217 2.034878 GAATTTTGGCATCCCCCTCTC 58.965 52.381 0.00 0.00 0.00 3.20
8612 15218 0.262876 ATTTTGGCATCCCCCTCTCC 59.737 55.000 0.00 0.00 0.00 3.71
8613 15219 0.850883 TTTTGGCATCCCCCTCTCCT 60.851 55.000 0.00 0.00 0.00 3.69
8614 15220 0.850883 TTTGGCATCCCCCTCTCCTT 60.851 55.000 0.00 0.00 0.00 3.36
8615 15221 0.850883 TTGGCATCCCCCTCTCCTTT 60.851 55.000 0.00 0.00 0.00 3.11
8616 15222 1.281925 TGGCATCCCCCTCTCCTTTC 61.282 60.000 0.00 0.00 0.00 2.62
8691 15298 8.898983 TTGTGTGTAAAAGCAAGTAAAGTAAC 57.101 30.769 0.00 0.00 0.00 2.50
8747 15355 5.050490 CGTGCACTAGCTAATTTATGAGGT 58.950 41.667 16.19 0.00 42.74 3.85
8795 15413 5.517770 GCTGCAGCCAACTCTAAATTATTTG 59.482 40.000 28.76 0.00 34.31 2.32
8814 15432 4.967084 TTGAAGGTTTAGCTGTGTCCTA 57.033 40.909 0.00 0.00 0.00 2.94
8824 15442 3.477530 AGCTGTGTCCTAAAGTCAAACC 58.522 45.455 0.00 0.00 0.00 3.27
8838 15456 9.831737 CTAAAGTCAAACCAATCTACATTTGAG 57.168 33.333 0.00 0.00 40.67 3.02
8844 15462 5.886960 ACCAATCTACATTTGAGCAAGTC 57.113 39.130 0.00 0.00 0.00 3.01
8847 15465 6.595716 ACCAATCTACATTTGAGCAAGTCTAC 59.404 38.462 0.00 0.00 0.00 2.59
8878 15496 7.886629 AAACATGCTAATATCAACACCAGAT 57.113 32.000 0.00 0.00 0.00 2.90
8879 15497 8.978874 AAACATGCTAATATCAACACCAGATA 57.021 30.769 0.00 0.00 32.93 1.98
8880 15498 9.578576 AAACATGCTAATATCAACACCAGATAT 57.421 29.630 0.00 0.00 39.67 1.63
8950 15568 7.652300 TTGTTGGCGTAGATGTTGATATATC 57.348 36.000 5.73 5.73 0.00 1.63
8975 15593 8.750298 TCTTTCTATTTACTTGGTCAGACCTAG 58.250 37.037 24.78 24.78 44.88 3.02
8979 15597 8.114102 TCTATTTACTTGGTCAGACCTAGAGAA 58.886 37.037 30.93 23.74 42.55 2.87
8980 15598 5.979288 TTACTTGGTCAGACCTAGAGAAC 57.021 43.478 30.93 0.53 42.55 3.01
9013 15669 7.731054 AGAATAAAGCTATCAACAGGAGTAGG 58.269 38.462 0.00 0.00 0.00 3.18
9014 15670 4.762289 AAAGCTATCAACAGGAGTAGGG 57.238 45.455 0.00 0.00 0.00 3.53
9015 15671 2.043227 AGCTATCAACAGGAGTAGGGC 58.957 52.381 0.00 0.00 0.00 5.19
9016 15672 1.269831 GCTATCAACAGGAGTAGGGCG 60.270 57.143 0.00 0.00 0.00 6.13
9017 15673 2.032620 CTATCAACAGGAGTAGGGCGT 58.967 52.381 0.00 0.00 0.00 5.68
9049 15705 1.298859 GCGTCACGGAGGCTGAAAAT 61.299 55.000 0.00 0.00 39.86 1.82
9055 15711 3.253188 TCACGGAGGCTGAAAATTTTGAG 59.747 43.478 12.47 12.47 0.00 3.02
9058 15714 4.022849 ACGGAGGCTGAAAATTTTGAGAAG 60.023 41.667 19.88 8.02 0.00 2.85
9148 15805 8.496916 TGTAATGTGTCTCTAGGTATAGGTGTA 58.503 37.037 0.00 0.00 0.00 2.90
9149 15806 9.001542 GTAATGTGTCTCTAGGTATAGGTGTAG 57.998 40.741 0.00 0.00 0.00 2.74
9221 15878 6.388435 TTTTTGAAATTTGGCCTCCATTTG 57.612 33.333 3.32 0.00 31.53 2.32
9282 15939 2.226330 TCATAAAACCACTGCGCTGTT 58.774 42.857 18.01 8.19 0.00 3.16
9415 16230 1.347707 GACCTGACATGGAACCTGTGA 59.652 52.381 0.00 0.00 0.00 3.58
9453 16268 3.879998 TGTTGTGGTCTTCTACAAAGCA 58.120 40.909 0.00 0.00 44.24 3.91
9504 16330 3.072330 TGACATGTACACCACTCCAACAT 59.928 43.478 0.00 0.00 0.00 2.71
9541 16377 4.863548 ACAAGATGGTGGATCATCATGTT 58.136 39.130 5.18 0.00 46.98 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.042843 CGTGGAGCCTAGGGACCT 60.043 66.667 11.72 0.00 0.00 3.85
5 6 3.851128 GCGTGGAGCCTAGGGACC 61.851 72.222 11.72 0.00 40.81 4.46
6 7 4.208686 CGCGTGGAGCCTAGGGAC 62.209 72.222 11.72 0.00 44.76 4.46
103 657 9.039870 CCAGTTGTTGTTTTCTGCATATTTTTA 57.960 29.630 0.00 0.00 0.00 1.52
113 667 3.181397 CAGTGCCAGTTGTTGTTTTCTG 58.819 45.455 0.00 0.00 0.00 3.02
129 683 9.846248 CTTATCTATTAATTAAATGCCCAGTGC 57.154 33.333 1.21 0.00 41.77 4.40
170 727 6.543735 AGGGAGTAGTTTGCTGTCTTTTATT 58.456 36.000 0.00 0.00 0.00 1.40
181 739 1.675116 GGAACGGAGGGAGTAGTTTGC 60.675 57.143 0.00 0.00 0.00 3.68
182 740 1.900486 AGGAACGGAGGGAGTAGTTTG 59.100 52.381 0.00 0.00 0.00 2.93
186 744 5.139001 AGTATTTAGGAACGGAGGGAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
187 745 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
188 746 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
189 747 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
190 748 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
191 749 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
192 750 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
193 751 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
194 752 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
195 753 8.767478 TTAGAAAGACAAGTATTTAGGAACGG 57.233 34.615 0.00 0.00 0.00 4.44
196 754 8.381387 GCTTAGAAAGACAAGTATTTAGGAACG 58.619 37.037 0.00 0.00 0.00 3.95
197 755 9.216117 TGCTTAGAAAGACAAGTATTTAGGAAC 57.784 33.333 0.00 0.00 0.00 3.62
198 756 9.959721 ATGCTTAGAAAGACAAGTATTTAGGAA 57.040 29.630 0.00 0.00 0.00 3.36
199 757 9.959721 AATGCTTAGAAAGACAAGTATTTAGGA 57.040 29.630 0.00 0.00 34.65 2.94
204 762 9.899226 GTTGAAATGCTTAGAAAGACAAGTATT 57.101 29.630 0.00 0.00 38.29 1.89
205 763 9.066892 TGTTGAAATGCTTAGAAAGACAAGTAT 57.933 29.630 0.00 0.00 0.00 2.12
206 764 8.445275 TGTTGAAATGCTTAGAAAGACAAGTA 57.555 30.769 0.00 0.00 0.00 2.24
207 765 7.333528 TGTTGAAATGCTTAGAAAGACAAGT 57.666 32.000 0.00 0.00 0.00 3.16
208 766 7.917505 ACTTGTTGAAATGCTTAGAAAGACAAG 59.082 33.333 0.00 0.00 43.36 3.16
209 767 7.701924 CACTTGTTGAAATGCTTAGAAAGACAA 59.298 33.333 0.00 0.00 0.00 3.18
210 768 7.066887 TCACTTGTTGAAATGCTTAGAAAGACA 59.933 33.333 0.00 0.00 0.00 3.41
211 769 7.377131 GTCACTTGTTGAAATGCTTAGAAAGAC 59.623 37.037 0.00 0.00 35.39 3.01
212 770 7.283127 AGTCACTTGTTGAAATGCTTAGAAAGA 59.717 33.333 0.00 0.00 35.39 2.52
213 771 7.420800 AGTCACTTGTTGAAATGCTTAGAAAG 58.579 34.615 0.00 0.00 35.39 2.62
214 772 7.333528 AGTCACTTGTTGAAATGCTTAGAAA 57.666 32.000 0.00 0.00 35.39 2.52
215 773 6.942532 AGTCACTTGTTGAAATGCTTAGAA 57.057 33.333 0.00 0.00 35.39 2.10
216 774 6.989759 TGTAGTCACTTGTTGAAATGCTTAGA 59.010 34.615 0.00 0.00 35.39 2.10
217 775 7.189693 TGTAGTCACTTGTTGAAATGCTTAG 57.810 36.000 0.00 0.00 35.39 2.18
218 776 7.744087 ATGTAGTCACTTGTTGAAATGCTTA 57.256 32.000 0.00 0.00 35.39 3.09
219 777 6.639632 ATGTAGTCACTTGTTGAAATGCTT 57.360 33.333 0.00 0.00 35.39 3.91
220 778 7.148188 CCATATGTAGTCACTTGTTGAAATGCT 60.148 37.037 1.24 0.00 35.39 3.79
221 779 6.968904 CCATATGTAGTCACTTGTTGAAATGC 59.031 38.462 1.24 0.00 35.39 3.56
222 780 8.267620 TCCATATGTAGTCACTTGTTGAAATG 57.732 34.615 1.24 0.00 35.39 2.32
223 781 7.066284 GCTCCATATGTAGTCACTTGTTGAAAT 59.934 37.037 1.24 0.00 35.39 2.17
224 782 6.371548 GCTCCATATGTAGTCACTTGTTGAAA 59.628 38.462 1.24 0.00 35.39 2.69
225 783 5.874810 GCTCCATATGTAGTCACTTGTTGAA 59.125 40.000 1.24 0.00 35.39 2.69
226 784 5.046663 TGCTCCATATGTAGTCACTTGTTGA 60.047 40.000 1.24 0.00 0.00 3.18
227 785 5.178061 TGCTCCATATGTAGTCACTTGTTG 58.822 41.667 1.24 0.00 0.00 3.33
228 786 5.420725 TGCTCCATATGTAGTCACTTGTT 57.579 39.130 1.24 0.00 0.00 2.83
229 787 5.420725 TTGCTCCATATGTAGTCACTTGT 57.579 39.130 1.24 0.00 0.00 3.16
230 788 6.741992 TTTTGCTCCATATGTAGTCACTTG 57.258 37.500 1.24 0.00 0.00 3.16
231 789 7.112122 TCATTTTGCTCCATATGTAGTCACTT 58.888 34.615 1.24 0.00 0.00 3.16
232 790 6.653020 TCATTTTGCTCCATATGTAGTCACT 58.347 36.000 1.24 0.00 0.00 3.41
233 791 6.540189 ACTCATTTTGCTCCATATGTAGTCAC 59.460 38.462 1.24 0.00 0.00 3.67
234 792 6.539826 CACTCATTTTGCTCCATATGTAGTCA 59.460 38.462 1.24 0.00 0.00 3.41
235 793 6.763135 TCACTCATTTTGCTCCATATGTAGTC 59.237 38.462 1.24 0.00 0.00 2.59
236 794 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
237 795 7.558161 TTCACTCATTTTGCTCCATATGTAG 57.442 36.000 1.24 0.00 0.00 2.74
238 796 7.994911 AGATTCACTCATTTTGCTCCATATGTA 59.005 33.333 1.24 0.00 0.00 2.29
239 797 6.832384 AGATTCACTCATTTTGCTCCATATGT 59.168 34.615 1.24 0.00 0.00 2.29
240 798 7.273320 AGATTCACTCATTTTGCTCCATATG 57.727 36.000 0.00 0.00 0.00 1.78
241 799 7.994911 TGTAGATTCACTCATTTTGCTCCATAT 59.005 33.333 0.00 0.00 0.00 1.78
242 800 7.280876 GTGTAGATTCACTCATTTTGCTCCATA 59.719 37.037 0.00 0.00 35.68 2.74
243 801 6.094603 GTGTAGATTCACTCATTTTGCTCCAT 59.905 38.462 0.00 0.00 35.68 3.41
244 802 5.412594 GTGTAGATTCACTCATTTTGCTCCA 59.587 40.000 0.00 0.00 35.68 3.86
245 803 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
246 804 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
316 874 7.764443 CCGTTCCTGAATATTTGTCTTTCTAGA 59.236 37.037 0.00 0.00 0.00 2.43
317 875 7.764443 TCCGTTCCTGAATATTTGTCTTTCTAG 59.236 37.037 0.00 0.00 0.00 2.43
318 876 7.617225 TCCGTTCCTGAATATTTGTCTTTCTA 58.383 34.615 0.00 0.00 0.00 2.10
319 877 6.472887 TCCGTTCCTGAATATTTGTCTTTCT 58.527 36.000 0.00 0.00 0.00 2.52
320 878 6.183360 CCTCCGTTCCTGAATATTTGTCTTTC 60.183 42.308 0.00 0.00 0.00 2.62
321 879 5.648092 CCTCCGTTCCTGAATATTTGTCTTT 59.352 40.000 0.00 0.00 0.00 2.52
322 880 5.186198 CCTCCGTTCCTGAATATTTGTCTT 58.814 41.667 0.00 0.00 0.00 3.01
323 881 4.384208 CCCTCCGTTCCTGAATATTTGTCT 60.384 45.833 0.00 0.00 0.00 3.41
324 882 3.877508 CCCTCCGTTCCTGAATATTTGTC 59.122 47.826 0.00 0.00 0.00 3.18
325 883 3.521937 TCCCTCCGTTCCTGAATATTTGT 59.478 43.478 0.00 0.00 0.00 2.83
326 884 4.130118 CTCCCTCCGTTCCTGAATATTTG 58.870 47.826 0.00 0.00 0.00 2.32
327 885 3.780850 ACTCCCTCCGTTCCTGAATATTT 59.219 43.478 0.00 0.00 0.00 1.40
328 886 3.385115 ACTCCCTCCGTTCCTGAATATT 58.615 45.455 0.00 0.00 0.00 1.28
329 887 3.047695 ACTCCCTCCGTTCCTGAATAT 57.952 47.619 0.00 0.00 0.00 1.28
330 888 2.544844 ACTCCCTCCGTTCCTGAATA 57.455 50.000 0.00 0.00 0.00 1.75
331 889 2.544844 TACTCCCTCCGTTCCTGAAT 57.455 50.000 0.00 0.00 0.00 2.57
332 890 2.544844 ATACTCCCTCCGTTCCTGAA 57.455 50.000 0.00 0.00 0.00 3.02
333 891 3.897657 ATATACTCCCTCCGTTCCTGA 57.102 47.619 0.00 0.00 0.00 3.86
334 892 7.177921 TGTTATTATATACTCCCTCCGTTCCTG 59.822 40.741 0.00 0.00 0.00 3.86
335 893 7.243824 TGTTATTATATACTCCCTCCGTTCCT 58.756 38.462 0.00 0.00 0.00 3.36
336 894 7.472334 TGTTATTATATACTCCCTCCGTTCC 57.528 40.000 0.00 0.00 0.00 3.62
407 968 5.335661 GGACGGTTTAAGCATGTGATTCTTT 60.336 40.000 0.00 0.00 0.00 2.52
444 1005 4.523083 TGAGTGTTTGTGCTAGGAACTTT 58.477 39.130 0.00 0.00 41.75 2.66
447 1008 3.877508 AGTTGAGTGTTTGTGCTAGGAAC 59.122 43.478 0.00 0.00 0.00 3.62
465 1026 1.004398 TGTGCGTGTAAAAGCGAGTTG 60.004 47.619 0.00 0.00 35.87 3.16
469 1030 1.222300 ACATGTGCGTGTAAAAGCGA 58.778 45.000 0.00 0.00 35.87 4.93
490 1051 9.853555 ATTCGCACTAAAATGAAATATTCACAA 57.146 25.926 0.00 0.00 43.48 3.33
492 1053 9.502145 TGATTCGCACTAAAATGAAATATTCAC 57.498 29.630 0.00 0.00 43.48 3.18
499 1060 6.027131 CCGATTGATTCGCACTAAAATGAAA 58.973 36.000 0.00 0.00 46.71 2.69
516 1077 0.695924 ACCATCCAACCACCGATTGA 59.304 50.000 0.00 0.00 0.00 2.57
520 1081 1.646912 TCTAACCATCCAACCACCGA 58.353 50.000 0.00 0.00 0.00 4.69
522 1083 2.307686 TCCTTCTAACCATCCAACCACC 59.692 50.000 0.00 0.00 0.00 4.61
539 1100 2.039879 GGGTTGTGATACCACTGTCCTT 59.960 50.000 0.00 0.00 43.55 3.36
564 1125 1.062488 AGCACCAGGACTTGAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
591 1152 2.540515 CACAGGTGCCTCGTAATACAG 58.459 52.381 0.00 0.00 0.00 2.74
596 1157 1.001181 GTTACCACAGGTGCCTCGTAA 59.999 52.381 0.00 0.00 36.19 3.18
614 1175 7.601886 CGGCATATCTCTTAGATTGATGAAGTT 59.398 37.037 0.00 0.00 36.20 2.66
653 1214 2.283298 CACGCACATCCTAGCATCTTT 58.717 47.619 0.00 0.00 0.00 2.52
678 1248 4.634703 ATGCGTGCACCCCGTGAA 62.635 61.111 12.15 0.00 35.23 3.18
683 1253 2.106683 GTACAGATGCGTGCACCCC 61.107 63.158 12.15 3.00 0.00 4.95
684 1254 1.079127 AGTACAGATGCGTGCACCC 60.079 57.895 12.15 2.06 0.00 4.61
687 1257 0.033366 ACACAGTACAGATGCGTGCA 59.967 50.000 0.00 0.00 0.00 4.57
688 1258 1.148310 AACACAGTACAGATGCGTGC 58.852 50.000 0.00 0.00 0.00 5.34
689 1259 4.983215 TTTAACACAGTACAGATGCGTG 57.017 40.909 0.00 0.00 0.00 5.34
784 1521 6.882140 CACCCAACATAAATACTTACCACTCA 59.118 38.462 0.00 0.00 0.00 3.41
820 1564 1.925847 CAGCACAAGAGAGAGATTCGC 59.074 52.381 0.00 0.00 0.00 4.70
924 1695 4.394712 GTCCGGCCAGGTCAGGTG 62.395 72.222 2.24 0.00 41.99 4.00
1632 2412 1.458588 GGAGAGGAAGCGGAGGGAT 60.459 63.158 0.00 0.00 0.00 3.85
1713 2493 0.033011 ACACATCTAGGGCGGAGAGT 60.033 55.000 0.00 0.00 0.00 3.24
1878 2658 1.965930 GCGGTTGATGGTGAGCACA 60.966 57.895 2.75 0.00 0.00 4.57
1963 2743 2.362397 AGCGACACTCATCGAATACCAT 59.638 45.455 0.00 0.00 45.13 3.55
2004 2784 0.824109 TAATGAGCTGAGACACCCCG 59.176 55.000 0.00 0.00 0.00 5.73
2064 2844 0.322816 CATGTGGGTTGGTCTCAGGG 60.323 60.000 0.00 0.00 0.00 4.45
2067 2847 1.074775 GCCATGTGGGTTGGTCTCA 59.925 57.895 0.54 0.00 39.65 3.27
2072 2852 0.247185 GTTCATGCCATGTGGGTTGG 59.753 55.000 4.31 0.00 39.65 3.77
2184 2964 2.390938 TCATCGATAACCGCGAATGTC 58.609 47.619 8.23 2.42 41.52 3.06
2366 3146 5.752892 TCGTCACTACTATAGCTTGAAGG 57.247 43.478 0.00 0.00 0.00 3.46
2367 3147 9.900710 AATTATCGTCACTACTATAGCTTGAAG 57.099 33.333 0.00 2.98 0.00 3.02
2391 3171 6.932356 ATGACATCAAGATGCGTAAGAAAT 57.068 33.333 9.85 0.00 42.39 2.17
2399 3179 3.752412 ACACAATGACATCAAGATGCG 57.248 42.857 9.85 0.00 42.39 4.73
2457 3237 1.891150 CCCTGATCTGCAACTGCTTTT 59.109 47.619 2.95 0.00 42.66 2.27
2682 3462 1.228737 GCTTTTACCCCACCAGCCA 60.229 57.895 0.00 0.00 0.00 4.75
2921 3702 0.882927 AGCGAGCAAGCGTAACCAAA 60.883 50.000 0.00 0.00 43.00 3.28
2999 3780 7.393234 AGAAGCATTAAAGCAAGGTACATGTTA 59.607 33.333 2.30 0.00 36.85 2.41
3000 3781 5.982890 AGCATTAAAGCAAGGTACATGTT 57.017 34.783 2.30 0.00 36.85 2.71
3001 3782 5.711976 AGAAGCATTAAAGCAAGGTACATGT 59.288 36.000 2.69 2.69 36.85 3.21
3004 3785 6.712998 TGTTAGAAGCATTAAAGCAAGGTACA 59.287 34.615 5.36 1.37 36.85 2.90
3017 3798 8.370182 ACAAAAATGGAAGATGTTAGAAGCATT 58.630 29.630 0.00 0.00 0.00 3.56
3020 3801 7.370383 TGACAAAAATGGAAGATGTTAGAAGC 58.630 34.615 0.00 0.00 0.00 3.86
3021 3802 9.748708 TTTGACAAAAATGGAAGATGTTAGAAG 57.251 29.630 0.00 0.00 0.00 2.85
3053 3841 6.796648 ACAAGGGGGCTAAAGTAGATTTAAA 58.203 36.000 0.00 0.00 32.98 1.52
3064 3852 2.580783 AGCTGAATACAAGGGGGCTAAA 59.419 45.455 0.00 0.00 0.00 1.85
3065 3853 2.092429 CAGCTGAATACAAGGGGGCTAA 60.092 50.000 8.42 0.00 0.00 3.09
3093 3881 6.929049 CACCTATGTCACAGTTTCTGACTAAA 59.071 38.462 3.70 0.00 39.11 1.85
3135 3923 1.901591 AGGTGCAGATTCAAGTGTGG 58.098 50.000 0.00 0.00 0.00 4.17
3166 3955 2.880268 TGGAAAGTGCAGACAAGACATG 59.120 45.455 0.00 0.00 0.00 3.21
3183 3972 3.840666 ACTCATTCCTTACAGCTCTGGAA 59.159 43.478 8.19 8.19 41.96 3.53
3392 4182 6.257994 TGGGAGCTCATTAGAAGATTCAAT 57.742 37.500 17.19 0.00 0.00 2.57
3521 4518 3.181484 GCCTGCATGCAAAATGATACTCA 60.181 43.478 22.88 0.00 0.00 3.41
3574 4571 6.688385 CAGCATTATTATTGTTGTTGTCTCCG 59.312 38.462 0.00 0.00 0.00 4.63
3589 4586 2.689471 CTGGCCAACAGCAGCATTATTA 59.311 45.455 7.01 0.00 46.50 0.98
3746 4749 7.201376 CCAATTGTAATTTGAGATTTGTCGCAG 60.201 37.037 4.43 0.00 0.00 5.18
3944 6828 2.028385 CCCCTATATGTTAGGCGTCACC 60.028 54.545 0.00 0.00 39.61 4.02
3963 7039 3.434940 TTTCCTTTAACTCAGCTCCCC 57.565 47.619 0.00 0.00 0.00 4.81
3984 7060 7.624549 TGCTCAGGTGAAAACTAAATCTAGAT 58.375 34.615 0.00 0.00 0.00 1.98
4111 7191 7.446001 AGCAAGGAGAGAAAGATGTAAAAAG 57.554 36.000 0.00 0.00 0.00 2.27
4117 7197 3.505293 GCAAAGCAAGGAGAGAAAGATGT 59.495 43.478 0.00 0.00 0.00 3.06
4119 7199 3.505293 GTGCAAAGCAAGGAGAGAAAGAT 59.495 43.478 0.00 0.00 41.47 2.40
4123 7205 1.609208 GGTGCAAAGCAAGGAGAGAA 58.391 50.000 0.00 0.00 41.47 2.87
4224 7307 7.604164 ACAGAGTGATACCTAAACAATTGAGTG 59.396 37.037 13.59 0.00 0.00 3.51
4225 7308 7.680730 ACAGAGTGATACCTAAACAATTGAGT 58.319 34.615 13.59 1.50 0.00 3.41
4226 7309 7.819415 TGACAGAGTGATACCTAAACAATTGAG 59.181 37.037 13.59 0.00 0.00 3.02
4227 7310 7.676004 TGACAGAGTGATACCTAAACAATTGA 58.324 34.615 13.59 0.00 0.00 2.57
4228 7311 7.905604 TGACAGAGTGATACCTAAACAATTG 57.094 36.000 3.24 3.24 0.00 2.32
4229 7312 8.375506 TCTTGACAGAGTGATACCTAAACAATT 58.624 33.333 0.00 0.00 0.00 2.32
4230 7313 7.907389 TCTTGACAGAGTGATACCTAAACAAT 58.093 34.615 0.00 0.00 0.00 2.71
4231 7314 7.297936 TCTTGACAGAGTGATACCTAAACAA 57.702 36.000 0.00 0.00 0.00 2.83
4241 7328 8.025445 GCATTTAAACATTCTTGACAGAGTGAT 58.975 33.333 2.09 0.00 38.73 3.06
4387 7585 6.876257 AGAAGTCAAGCCAAAACAGAGTATAG 59.124 38.462 0.00 0.00 0.00 1.31
4409 7608 4.321452 GCATTGCAAGATTTGGACTGAGAA 60.321 41.667 4.94 0.00 34.37 2.87
4709 8430 7.373493 ACAGAAGAGTTCAAAGCAAATAATGG 58.627 34.615 0.00 0.00 0.00 3.16
4732 8453 4.650734 TCCAGCACATCAAACAATAGACA 58.349 39.130 0.00 0.00 0.00 3.41
4733 8454 5.824904 ATCCAGCACATCAAACAATAGAC 57.175 39.130 0.00 0.00 0.00 2.59
4737 8458 3.833650 TCCAATCCAGCACATCAAACAAT 59.166 39.130 0.00 0.00 0.00 2.71
4781 8502 5.374921 CAGCAGGATCAAGGAAATATCAGT 58.625 41.667 0.00 0.00 0.00 3.41
4783 8504 4.139786 GCAGCAGGATCAAGGAAATATCA 58.860 43.478 0.00 0.00 0.00 2.15
4795 8516 6.723282 CAATAGAAAAGTTAGCAGCAGGATC 58.277 40.000 0.00 0.00 0.00 3.36
4975 8712 5.353956 TGACGCAAATAGCAATAGAACATGT 59.646 36.000 0.00 0.00 46.13 3.21
4984 8721 4.397730 TGGTACATTGACGCAAATAGCAAT 59.602 37.500 0.00 0.00 46.13 3.56
4990 8731 4.009675 ACATCTGGTACATTGACGCAAAT 58.990 39.130 0.00 0.00 38.20 2.32
4998 8739 5.049198 GGTGCATGATACATCTGGTACATTG 60.049 44.000 0.00 0.00 38.20 2.82
5066 8814 8.364142 AGCTCAACATAGACCTATTGATAGAAC 58.636 37.037 0.00 0.00 32.05 3.01
5071 8819 7.070447 TCAGAAGCTCAACATAGACCTATTGAT 59.930 37.037 0.00 0.00 0.00 2.57
5104 8852 5.314529 AGGATGAAGTGCATGATCATAAGG 58.685 41.667 8.15 0.00 37.34 2.69
5114 8862 2.040813 ACTGGACAAGGATGAAGTGCAT 59.959 45.455 0.00 0.00 40.77 3.96
5147 8903 8.477419 AAAATTAGATCAAAGAGGGTCACAAA 57.523 30.769 0.00 0.00 0.00 2.83
5250 9006 6.340962 TCATCGAGGTTCAAGAAAAGAGTA 57.659 37.500 0.00 0.00 0.00 2.59
5265 9021 2.103094 TGAACTAAGGGCATCATCGAGG 59.897 50.000 0.00 0.00 0.00 4.63
5357 9114 8.639761 GCTTAGAAAGTAGGTACTGGATATCAA 58.360 37.037 4.83 0.00 41.52 2.57
5358 9115 8.005388 AGCTTAGAAAGTAGGTACTGGATATCA 58.995 37.037 4.83 0.00 41.52 2.15
5359 9116 8.411991 AGCTTAGAAAGTAGGTACTGGATATC 57.588 38.462 0.00 0.00 41.52 1.63
5365 9122 7.644551 CGTGATTAGCTTAGAAAGTAGGTACTG 59.355 40.741 0.00 0.00 41.52 2.74
5373 9130 5.468746 TGTTTGCGTGATTAGCTTAGAAAGT 59.531 36.000 0.00 0.00 35.28 2.66
5528 9285 1.174783 AGTGCACTAGGACAGGTACG 58.825 55.000 20.16 0.00 38.75 3.67
5625 9382 6.016276 GGGAGAAACAATGACACAAATACAGT 60.016 38.462 0.00 0.00 0.00 3.55
5695 9452 5.376854 AGCATATGGTGAAAACAACTGAC 57.623 39.130 6.62 0.00 0.00 3.51
5806 9563 5.601662 GCATGTAGCATCTAAGGTTGTCTA 58.398 41.667 0.00 0.00 44.79 2.59
5865 9772 6.039941 CACATTGGGTGGTGTTTTCTAACTTA 59.960 38.462 0.00 0.00 44.04 2.24
5925 9832 8.146412 GCAAAGAGGCATAATTTGGAAGATATT 58.854 33.333 9.68 0.00 35.07 1.28
6254 10237 0.179702 CCTGAGATAAGGCTGCTGCA 59.820 55.000 17.89 0.88 41.91 4.41
6281 10264 6.003950 TCCAGCTTCTTGTATAAAAAGTGCT 58.996 36.000 0.00 10.69 36.64 4.40
6345 10328 2.402564 AGCTTCAGGGCTAGCTGATAA 58.597 47.619 15.72 4.00 45.55 1.75
6356 10339 2.496899 TCAAAGGCTAAGCTTCAGGG 57.503 50.000 0.00 0.00 0.00 4.45
6515 10503 9.003658 AGAACTAACTTTGACATGGTCATTAAG 57.996 33.333 0.00 4.84 42.40 1.85
6520 10508 5.758296 GTCAGAACTAACTTTGACATGGTCA 59.242 40.000 0.00 0.00 41.09 4.02
6542 10530 9.585099 CTATTATGGATGAGCTCTAAGAATGTC 57.415 37.037 16.19 0.65 0.00 3.06
6575 10563 9.443323 TCGAACTTTACAAATCTCAATGGATTA 57.557 29.630 0.00 0.00 35.19 1.75
6599 10587 8.528295 CCAAACACATTTAAAGTTACTGTTTCG 58.472 33.333 0.00 0.00 29.99 3.46
6678 10668 4.010349 GGAACGAGAATCCTGACCAAATT 58.990 43.478 0.00 0.00 33.98 1.82
6679 10669 3.264450 AGGAACGAGAATCCTGACCAAAT 59.736 43.478 0.00 0.00 45.60 2.32
6696 10686 7.120432 AGCAAGTTTCTGAAGATATTGAGGAAC 59.880 37.037 2.77 2.77 0.00 3.62
6768 10759 1.214367 CGGCCATAACACGGTCATAC 58.786 55.000 2.24 0.00 0.00 2.39
6777 10768 2.500392 AAACTAAGCCGGCCATAACA 57.500 45.000 26.15 0.42 0.00 2.41
6778 10769 5.353400 GGATATAAACTAAGCCGGCCATAAC 59.647 44.000 26.15 8.02 0.00 1.89
6779 10770 5.493809 GGATATAAACTAAGCCGGCCATAA 58.506 41.667 26.15 4.98 0.00 1.90
6780 10771 4.382254 CGGATATAAACTAAGCCGGCCATA 60.382 45.833 26.15 16.26 35.42 2.74
6781 10772 3.618997 CGGATATAAACTAAGCCGGCCAT 60.619 47.826 26.15 15.94 35.42 4.40
6782 10773 2.289195 CGGATATAAACTAAGCCGGCCA 60.289 50.000 26.15 11.01 35.42 5.36
6783 10774 2.344025 CGGATATAAACTAAGCCGGCC 58.656 52.381 26.15 5.07 35.42 6.13
6786 10777 5.130292 TCTTCCGGATATAAACTAAGCCG 57.870 43.478 4.15 0.00 38.54 5.52
6787 10778 5.480205 CCTCTTCCGGATATAAACTAAGCC 58.520 45.833 4.15 0.00 0.00 4.35
6788 10779 4.930405 GCCTCTTCCGGATATAAACTAAGC 59.070 45.833 4.15 0.00 0.00 3.09
6789 10780 5.480205 GGCCTCTTCCGGATATAAACTAAG 58.520 45.833 4.15 0.00 0.00 2.18
6790 10781 4.285260 GGGCCTCTTCCGGATATAAACTAA 59.715 45.833 4.15 0.00 0.00 2.24
6791 10782 3.836562 GGGCCTCTTCCGGATATAAACTA 59.163 47.826 4.15 0.00 0.00 2.24
6792 10783 2.638363 GGGCCTCTTCCGGATATAAACT 59.362 50.000 4.15 0.00 0.00 2.66
6793 10784 2.370849 TGGGCCTCTTCCGGATATAAAC 59.629 50.000 4.15 0.00 0.00 2.01
6794 10785 2.370849 GTGGGCCTCTTCCGGATATAAA 59.629 50.000 4.15 0.00 0.00 1.40
6795 10786 1.975680 GTGGGCCTCTTCCGGATATAA 59.024 52.381 4.15 0.00 0.00 0.98
6796 10787 1.640917 GTGGGCCTCTTCCGGATATA 58.359 55.000 4.15 0.00 0.00 0.86
6797 10788 1.128188 GGTGGGCCTCTTCCGGATAT 61.128 60.000 4.15 0.00 0.00 1.63
6798 10789 1.764854 GGTGGGCCTCTTCCGGATA 60.765 63.158 4.15 0.00 0.00 2.59
6799 10790 3.090532 GGTGGGCCTCTTCCGGAT 61.091 66.667 4.15 0.00 0.00 4.18
6928 10919 0.977395 AGCCGGGCAATAGGAGATAC 59.023 55.000 23.09 0.00 0.00 2.24
6998 10989 2.890371 GTCGCGAGCTAGGGGAAA 59.110 61.111 10.24 0.00 0.00 3.13
7002 10993 4.592936 CGTCGTCGCGAGCTAGGG 62.593 72.222 10.24 4.43 36.23 3.53
7051 11042 1.004891 GGGAAGGATGGAGGAGGGT 59.995 63.158 0.00 0.00 0.00 4.34
7115 13416 1.687123 CCTAATACTAGCAGTGCCGGT 59.313 52.381 12.58 13.29 0.00 5.28
7116 13417 1.687123 ACCTAATACTAGCAGTGCCGG 59.313 52.381 12.58 7.46 0.00 6.13
7117 13418 3.454371 AACCTAATACTAGCAGTGCCG 57.546 47.619 12.58 5.94 0.00 5.69
7118 13419 5.429130 AGAAAACCTAATACTAGCAGTGCC 58.571 41.667 12.58 0.00 0.00 5.01
7202 13516 2.032681 GCCCTTTCACTGCTCGGT 59.967 61.111 0.00 0.00 0.00 4.69
7208 13522 4.222124 ACATAACTAGGCCCTTTCACTG 57.778 45.455 0.00 0.00 0.00 3.66
7217 13531 4.402474 AGCATTTGGAAACATAACTAGGCC 59.598 41.667 0.00 0.00 42.32 5.19
7290 13629 7.289310 TGGTCCAACACATTATCACATGATAT 58.711 34.615 0.00 0.00 36.94 1.63
7312 13651 4.019321 ACAGTAGTCCACATTAAGCATGGT 60.019 41.667 0.00 0.00 37.17 3.55
7407 13753 1.913778 ACATCATGCCACAAGCTCAA 58.086 45.000 0.00 0.00 44.23 3.02
7575 13932 8.935844 CAAGTCATACTAGCAGTTGATAAAACA 58.064 33.333 0.00 0.00 0.00 2.83
7611 13974 3.582780 CCGGTTACTACAGGAAGACAAC 58.417 50.000 0.00 0.00 41.60 3.32
7619 13982 0.177373 GGAAGCCCGGTTACTACAGG 59.823 60.000 0.00 0.00 39.11 4.00
7630 13993 1.303309 CTTATGCAAGAGGAAGCCCG 58.697 55.000 0.00 0.00 37.58 6.13
7661 14024 7.596749 AGTCGTTGAATCAGTAATTACTTGG 57.403 36.000 15.60 6.04 33.46 3.61
7705 14068 5.047660 GGCATTGTTACAATAAGAACCACCA 60.048 40.000 10.46 0.00 0.00 4.17
7829 14351 2.170187 AGAGCTAGAAACAGAGGCATGG 59.830 50.000 0.00 0.00 0.00 3.66
7853 14375 6.433716 TCAAATATCAAGGAGCACAACAATGA 59.566 34.615 0.00 0.00 0.00 2.57
7904 14435 4.747810 CATGGAGGCAGGTTTGAATAAAC 58.252 43.478 0.00 0.00 44.27 2.01
8503 15037 1.134848 GCTGCTCTTCTCCACCAGTAG 60.135 57.143 0.00 0.00 0.00 2.57
8556 15093 1.276138 TCATGTCGTCTGGTTCATGCT 59.724 47.619 0.00 0.00 37.95 3.79
8603 15209 1.557371 GTTCTCTGAAAGGAGAGGGGG 59.443 57.143 0.00 0.00 42.37 5.40
8608 15214 4.444876 CCAACCAAGTTCTCTGAAAGGAGA 60.445 45.833 0.00 0.00 40.16 3.71
8611 15217 2.294512 GCCAACCAAGTTCTCTGAAAGG 59.705 50.000 0.00 0.00 0.00 3.11
8612 15218 2.951642 TGCCAACCAAGTTCTCTGAAAG 59.048 45.455 0.00 0.00 0.00 2.62
8613 15219 3.011566 TGCCAACCAAGTTCTCTGAAA 57.988 42.857 0.00 0.00 0.00 2.69
8614 15220 2.727123 TGCCAACCAAGTTCTCTGAA 57.273 45.000 0.00 0.00 0.00 3.02
8615 15221 2.373169 AGATGCCAACCAAGTTCTCTGA 59.627 45.455 0.00 0.00 0.00 3.27
8616 15222 2.787994 AGATGCCAACCAAGTTCTCTG 58.212 47.619 0.00 0.00 0.00 3.35
8691 15298 8.668510 AAGATTATCTTACACACTAGGCAATG 57.331 34.615 5.56 0.00 34.42 2.82
8724 15331 5.050490 ACCTCATAAATTAGCTAGTGCACG 58.950 41.667 12.01 0.00 42.74 5.34
8747 15355 5.004448 TGAAGTCCAAATATACCGCAAACA 58.996 37.500 0.00 0.00 0.00 2.83
8795 15413 5.306394 ACTTTAGGACACAGCTAAACCTTC 58.694 41.667 6.31 0.00 32.90 3.46
8807 15425 6.708949 TGTAGATTGGTTTGACTTTAGGACAC 59.291 38.462 0.00 0.00 0.00 3.67
8814 15432 7.147976 GCTCAAATGTAGATTGGTTTGACTTT 58.852 34.615 0.00 0.00 36.11 2.66
8824 15442 7.547019 TCTGTAGACTTGCTCAAATGTAGATTG 59.453 37.037 0.00 0.00 0.00 2.67
8924 15542 3.889196 TCAACATCTACGCCAACAAAC 57.111 42.857 0.00 0.00 0.00 2.93
8950 15568 8.750298 TCTAGGTCTGACCAAGTAAATAGAAAG 58.250 37.037 27.48 1.15 41.95 2.62
8959 15577 5.258216 AGTTCTCTAGGTCTGACCAAGTA 57.742 43.478 27.48 12.90 41.95 2.24
9011 15667 2.198304 CTAGGCCTCCAAAACGCCCT 62.198 60.000 9.68 0.00 44.13 5.19
9012 15668 1.749258 CTAGGCCTCCAAAACGCCC 60.749 63.158 9.68 0.00 44.13 6.13
9013 15669 2.407428 GCTAGGCCTCCAAAACGCC 61.407 63.158 9.68 0.00 43.35 5.68
9014 15670 2.750888 CGCTAGGCCTCCAAAACGC 61.751 63.158 9.68 0.59 0.00 4.84
9015 15671 1.359459 GACGCTAGGCCTCCAAAACG 61.359 60.000 9.68 8.04 0.00 3.60
9016 15672 0.321298 TGACGCTAGGCCTCCAAAAC 60.321 55.000 9.68 0.00 0.00 2.43
9017 15673 0.321298 GTGACGCTAGGCCTCCAAAA 60.321 55.000 9.68 0.00 0.00 2.44
9098 15755 9.578576 ACATCCTCATATACATGCATACTTTTT 57.421 29.630 0.00 0.00 31.73 1.94
9102 15759 9.828039 CATTACATCCTCATATACATGCATACT 57.172 33.333 0.00 0.00 31.73 2.12
9103 15760 9.605275 ACATTACATCCTCATATACATGCATAC 57.395 33.333 0.00 0.00 31.73 2.39
9104 15761 9.603921 CACATTACATCCTCATATACATGCATA 57.396 33.333 0.00 0.00 31.73 3.14
9105 15762 8.105197 ACACATTACATCCTCATATACATGCAT 58.895 33.333 0.00 0.00 31.73 3.96
9106 15763 7.452562 ACACATTACATCCTCATATACATGCA 58.547 34.615 0.00 0.00 31.73 3.96
9107 15764 7.821359 AGACACATTACATCCTCATATACATGC 59.179 37.037 0.00 0.00 31.73 4.06
9117 15774 7.768807 ATACCTAGAGACACATTACATCCTC 57.231 40.000 0.00 0.00 0.00 3.71
9121 15778 8.005388 ACACCTATACCTAGAGACACATTACAT 58.995 37.037 0.00 0.00 0.00 2.29
9230 15887 2.804572 GCGGCATGCTTCTCTTGATAGA 60.805 50.000 18.92 0.00 41.73 1.98
9231 15888 1.530293 GCGGCATGCTTCTCTTGATAG 59.470 52.381 18.92 0.00 41.73 2.08
9232 15889 1.134431 TGCGGCATGCTTCTCTTGATA 60.134 47.619 18.92 0.00 46.63 2.15
9233 15890 0.393402 TGCGGCATGCTTCTCTTGAT 60.393 50.000 18.92 0.00 46.63 2.57
9234 15891 0.393402 ATGCGGCATGCTTCTCTTGA 60.393 50.000 18.92 0.00 46.63 3.02
9235 15892 0.454600 AATGCGGCATGCTTCTCTTG 59.545 50.000 17.43 0.38 46.63 3.02
9282 15939 6.769341 TCTTCTACGTACATGCCTAGTATTCA 59.231 38.462 0.00 0.00 0.00 2.57
9377 16167 7.494625 TGTCAGGTCCTTAATTAGCTTTATTCG 59.505 37.037 0.00 0.00 0.00 3.34
9415 16230 8.384607 ACCACAACAACTGTAAAAACAAAAAT 57.615 26.923 0.00 0.00 36.10 1.82
9504 16330 8.992349 CCACCATCTTGTCAGGGATATATATAA 58.008 37.037 0.00 0.00 0.00 0.98
9527 16354 3.875727 CAGTCCTCAACATGATGATCCAC 59.124 47.826 6.09 3.98 0.00 4.02
9541 16377 1.251527 GCGTCCTCCTTCAGTCCTCA 61.252 60.000 0.00 0.00 0.00 3.86
9629 16465 2.887152 ACTTGAAGGACAAACCATCTGC 59.113 45.455 0.00 0.00 42.04 4.26
9744 16580 4.163427 AGAAGACTGGATTGGTCTGAAGA 58.837 43.478 0.00 0.00 42.39 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.