Multiple sequence alignment - TraesCS5A01G531700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G531700 chr5A 100.000 5607 0 0 1 5607 689886880 689892486 0.000000e+00 10355.0
1 TraesCS5A01G531700 chr5A 81.784 1872 222 60 3101 4919 689913428 689915233 0.000000e+00 1458.0
2 TraesCS5A01G531700 chr5A 83.838 198 16 8 5086 5268 689915653 689915849 2.080000e-39 174.0
3 TraesCS5A01G531700 chr5A 77.000 300 32 20 494 790 691727463 691727728 2.720000e-28 137.0
4 TraesCS5A01G531700 chr4D 93.752 4065 175 32 915 4920 505428479 505432523 0.000000e+00 6026.0
5 TraesCS5A01G531700 chr4D 75.460 652 54 43 31 642 505427628 505428213 2.630000e-53 220.0
6 TraesCS5A01G531700 chr4D 83.838 198 17 8 5086 5268 505432921 505433118 2.080000e-39 174.0
7 TraesCS5A01G531700 chr4B 92.452 2981 199 16 1951 4916 652281015 652283984 0.000000e+00 4235.0
8 TraesCS5A01G531700 chr4B 89.869 306 16 7 1 300 652278824 652279120 4.100000e-101 379.0
9 TraesCS5A01G531700 chr4B 78.125 512 79 20 667 1162 652279422 652279916 1.530000e-75 294.0
10 TraesCS5A01G531700 chr4B 84.000 200 14 14 5086 5268 652284387 652284585 5.770000e-40 176.0
11 TraesCS5A01G531700 chr4B 92.982 57 3 1 541 596 652279332 652279388 1.290000e-11 82.4
12 TraesCS5A01G531700 chr2D 94.893 607 28 3 1302 1907 613465622 613465018 0.000000e+00 946.0
13 TraesCS5A01G531700 chr5D 93.740 607 33 4 1302 1907 52585651 52585049 0.000000e+00 905.0
14 TraesCS5A01G531700 chr3B 83.417 398 41 18 1047 1443 747741519 747741892 4.160000e-91 346.0
15 TraesCS5A01G531700 chr7A 92.857 154 10 1 1302 1455 7051319 7051167 7.310000e-54 222.0
16 TraesCS5A01G531700 chr7A 90.196 51 1 2 496 546 283289391 283289437 4.690000e-06 63.9
17 TraesCS5A01G531700 chrUn 90.566 53 1 2 494 546 74003301 74003349 3.630000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G531700 chr5A 689886880 689892486 5606 False 10355.00 10355 100.0000 1 5607 1 chr5A.!!$F1 5606
1 TraesCS5A01G531700 chr5A 689913428 689915849 2421 False 816.00 1458 82.8110 3101 5268 2 chr5A.!!$F3 2167
2 TraesCS5A01G531700 chr4D 505427628 505433118 5490 False 2140.00 6026 84.3500 31 5268 3 chr4D.!!$F1 5237
3 TraesCS5A01G531700 chr4B 652278824 652284585 5761 False 1033.28 4235 87.4856 1 5268 5 chr4B.!!$F1 5267
4 TraesCS5A01G531700 chr2D 613465018 613465622 604 True 946.00 946 94.8930 1302 1907 1 chr2D.!!$R1 605
5 TraesCS5A01G531700 chr5D 52585049 52585651 602 True 905.00 905 93.7400 1302 1907 1 chr5D.!!$R1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
731 790 0.035056 CATCCCCAGCTCCGTTTCTT 60.035 55.0 0.00 0.0 0.00 2.52 F
910 1043 0.601841 CTGCCGGGTACTTCACGTTT 60.602 55.0 2.18 0.0 41.99 3.60 F
913 1046 0.601841 CCGGGTACTTCACGTTTGCT 60.602 55.0 0.00 0.0 41.99 3.91 F
2013 2590 0.674895 AGAACACGGAGGAATGCAGC 60.675 55.0 0.00 0.0 0.00 5.25 F
3049 3626 0.180406 AGGTGGTTTCAACAGCGACT 59.820 50.0 0.00 0.0 40.98 4.18 F
4092 4703 0.042281 AGTCCCCACCAGTACTACCC 59.958 60.0 0.00 0.0 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2316 2893 0.820482 CATCATGCGGCCCTTCATCA 60.820 55.000 0.00 0.0 0.00 3.07 R
2764 3341 1.425066 TGGAGCTTGAATTCCACCTGT 59.575 47.619 2.27 0.0 38.53 4.00 R
2986 3563 3.630312 TGTTTACTGCTGTTTGAAGGTCC 59.370 43.478 0.09 0.0 0.00 4.46 R
3852 4457 1.408702 TGGGTTGCTCTTGCTTTTCAC 59.591 47.619 0.00 0.0 40.48 3.18 R
4160 4771 0.463204 TCTGATAGCTCCAGCACTGC 59.537 55.000 10.30 0.0 45.16 4.40 R
5492 6453 0.038892 GTGCAACAGCAGGGAATGTG 60.039 55.000 0.00 0.0 39.30 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 5.065914 GCTGGATCATTGCTACAGGAATAA 58.934 41.667 2.09 0.00 34.24 1.40
120 125 1.742268 GCTCTGATCCTGCCACTTTTC 59.258 52.381 0.00 0.00 0.00 2.29
143 148 4.748798 AGAGCAGAGGGGTGGGGG 62.749 72.222 0.00 0.00 0.00 5.40
202 209 0.473755 TGTGTGGTCACCTTGATGCT 59.526 50.000 0.00 0.00 43.26 3.79
262 281 2.820619 CGCCATAGCTGTGCTGCTG 61.821 63.158 4.68 0.42 43.87 4.41
263 282 3.108343 CCATAGCTGTGCTGCTGC 58.892 61.111 8.89 8.89 43.87 5.25
292 311 0.950555 CACGCTAGCTCCACAAAGCA 60.951 55.000 13.93 0.00 45.00 3.91
311 352 3.075134 AGCACAAAGAGGGGAAGAAGATT 59.925 43.478 0.00 0.00 0.00 2.40
312 353 3.192212 GCACAAAGAGGGGAAGAAGATTG 59.808 47.826 0.00 0.00 0.00 2.67
316 357 6.040842 CACAAAGAGGGGAAGAAGATTGAAAA 59.959 38.462 0.00 0.00 0.00 2.29
317 358 6.611236 ACAAAGAGGGGAAGAAGATTGAAAAA 59.389 34.615 0.00 0.00 0.00 1.94
348 404 4.687215 GACTGGCCAGTGCGAGCA 62.687 66.667 42.40 0.00 46.23 4.26
366 422 2.697229 AGCAAGCAAGAAAAGGCTTCTT 59.303 40.909 0.00 0.00 46.82 2.52
387 443 5.188751 TCTTCTTCTGATTCCTTCCTTCCTC 59.811 44.000 0.00 0.00 0.00 3.71
390 446 2.200081 CTGATTCCTTCCTTCCTCCCA 58.800 52.381 0.00 0.00 0.00 4.37
398 454 4.016706 CTTCCTCCCACCGCCGTT 62.017 66.667 0.00 0.00 0.00 4.44
430 486 4.834453 CTCCGCAGCTCAGGGCAG 62.834 72.222 0.00 0.00 44.79 4.85
443 499 3.138798 GGCAGCCAGCTGGTCATG 61.139 66.667 32.81 27.06 43.77 3.07
453 509 1.389609 GCTGGTCATGGCATCCCTTG 61.390 60.000 12.56 7.66 37.56 3.61
468 524 0.325933 CCTTGACATGGCCAGAGACA 59.674 55.000 13.05 10.35 0.00 3.41
469 525 1.064906 CCTTGACATGGCCAGAGACAT 60.065 52.381 13.05 0.00 0.00 3.06
471 527 0.393402 TGACATGGCCAGAGACATGC 60.393 55.000 13.05 3.11 46.35 4.06
472 528 1.077212 ACATGGCCAGAGACATGCC 60.077 57.895 13.05 0.00 46.35 4.40
473 529 1.826921 CATGGCCAGAGACATGCCC 60.827 63.158 13.05 0.00 44.72 5.36
474 530 2.005266 ATGGCCAGAGACATGCCCT 61.005 57.895 13.05 0.00 44.72 5.19
475 531 2.124403 GGCCAGAGACATGCCCTG 60.124 66.667 0.00 0.00 39.30 4.45
476 532 2.673200 GGCCAGAGACATGCCCTGA 61.673 63.158 0.00 0.00 39.30 3.86
477 533 1.300963 GCCAGAGACATGCCCTGAA 59.699 57.895 10.15 0.00 0.00 3.02
478 534 0.747283 GCCAGAGACATGCCCTGAAG 60.747 60.000 10.15 0.00 0.00 3.02
479 535 0.107312 CCAGAGACATGCCCTGAAGG 60.107 60.000 10.15 0.00 39.47 3.46
480 536 0.907486 CAGAGACATGCCCTGAAGGA 59.093 55.000 0.00 0.00 38.24 3.36
481 537 0.908198 AGAGACATGCCCTGAAGGAC 59.092 55.000 0.00 0.00 38.24 3.85
482 538 0.107459 GAGACATGCCCTGAAGGACC 60.107 60.000 0.00 0.00 38.24 4.46
505 561 1.133199 TCATGGTTGGTTGCTTCCCTT 60.133 47.619 0.00 0.00 0.00 3.95
516 572 0.905357 GCTTCCCTTGCACTCCTCTA 59.095 55.000 0.00 0.00 0.00 2.43
517 573 1.488393 GCTTCCCTTGCACTCCTCTAT 59.512 52.381 0.00 0.00 0.00 1.98
524 580 3.572255 CCTTGCACTCCTCTATCTAGTCC 59.428 52.174 0.00 0.00 0.00 3.85
526 582 4.093472 TGCACTCCTCTATCTAGTCCTC 57.907 50.000 0.00 0.00 0.00 3.71
531 587 4.724798 ACTCCTCTATCTAGTCCTCTGTGT 59.275 45.833 0.00 0.00 0.00 3.72
532 588 5.042463 TCCTCTATCTAGTCCTCTGTGTG 57.958 47.826 0.00 0.00 0.00 3.82
533 589 4.475381 TCCTCTATCTAGTCCTCTGTGTGT 59.525 45.833 0.00 0.00 0.00 3.72
534 590 4.578516 CCTCTATCTAGTCCTCTGTGTGTG 59.421 50.000 0.00 0.00 0.00 3.82
535 591 3.948473 TCTATCTAGTCCTCTGTGTGTGC 59.052 47.826 0.00 0.00 0.00 4.57
536 592 2.294449 TCTAGTCCTCTGTGTGTGCT 57.706 50.000 0.00 0.00 0.00 4.40
537 593 1.889170 TCTAGTCCTCTGTGTGTGCTG 59.111 52.381 0.00 0.00 0.00 4.41
538 594 1.889170 CTAGTCCTCTGTGTGTGCTGA 59.111 52.381 0.00 0.00 0.00 4.26
539 595 1.346062 AGTCCTCTGTGTGTGCTGAT 58.654 50.000 0.00 0.00 0.00 2.90
546 604 1.274447 CTGTGTGTGCTGATCTCCTCA 59.726 52.381 0.00 0.00 0.00 3.86
561 619 1.284408 CTCATCGGCTCGGAGCTAC 59.716 63.158 27.47 12.47 41.99 3.58
562 620 2.050895 CATCGGCTCGGAGCTACG 60.051 66.667 27.47 22.67 41.99 3.51
612 670 1.704582 GTCGCGATTGTCAGTGAGC 59.295 57.895 14.06 0.00 0.00 4.26
642 700 8.372459 TCTTTCTTGTTATACTCTTGCCTTGTA 58.628 33.333 0.00 0.00 0.00 2.41
643 701 8.911918 TTTCTTGTTATACTCTTGCCTTGTAA 57.088 30.769 0.00 0.00 0.00 2.41
644 702 9.515226 TTTCTTGTTATACTCTTGCCTTGTAAT 57.485 29.630 0.00 0.00 0.00 1.89
649 707 8.836413 TGTTATACTCTTGCCTTGTAATATTGC 58.164 33.333 0.00 0.00 0.00 3.56
650 708 9.057089 GTTATACTCTTGCCTTGTAATATTGCT 57.943 33.333 5.11 0.00 0.00 3.91
651 709 5.824904 ACTCTTGCCTTGTAATATTGCTG 57.175 39.130 5.11 0.00 0.00 4.41
652 710 4.641989 ACTCTTGCCTTGTAATATTGCTGG 59.358 41.667 5.11 8.10 0.00 4.85
653 711 3.381272 TCTTGCCTTGTAATATTGCTGGC 59.619 43.478 23.24 23.24 39.33 4.85
654 712 3.017048 TGCCTTGTAATATTGCTGGCT 57.983 42.857 26.82 0.00 39.57 4.75
655 713 2.689471 TGCCTTGTAATATTGCTGGCTG 59.311 45.455 26.82 8.00 39.57 4.85
656 714 2.035066 GCCTTGTAATATTGCTGGCTGG 59.965 50.000 22.96 12.02 36.32 4.85
657 715 2.624838 CCTTGTAATATTGCTGGCTGGG 59.375 50.000 5.11 0.00 0.00 4.45
658 716 3.290710 CTTGTAATATTGCTGGCTGGGT 58.709 45.455 5.11 0.00 0.00 4.51
659 717 3.380471 TGTAATATTGCTGGCTGGGTT 57.620 42.857 5.11 0.00 0.00 4.11
660 718 3.707316 TGTAATATTGCTGGCTGGGTTT 58.293 40.909 5.11 0.00 0.00 3.27
661 719 3.699038 TGTAATATTGCTGGCTGGGTTTC 59.301 43.478 5.11 0.00 0.00 2.78
662 720 1.780503 ATATTGCTGGCTGGGTTTCC 58.219 50.000 0.00 0.00 0.00 3.13
663 721 0.324275 TATTGCTGGCTGGGTTTCCC 60.324 55.000 0.00 0.00 45.71 3.97
664 722 2.097978 ATTGCTGGCTGGGTTTCCCT 62.098 55.000 6.38 0.00 45.70 4.20
665 723 2.361737 GCTGGCTGGGTTTCCCTC 60.362 66.667 6.38 0.00 45.70 4.30
673 731 2.035961 GCTGGGTTTCCCTCTTGTTTTC 59.964 50.000 6.38 0.00 45.70 2.29
674 732 3.566351 CTGGGTTTCCCTCTTGTTTTCT 58.434 45.455 6.38 0.00 45.70 2.52
684 742 7.938140 TCCCTCTTGTTTTCTAACCATAATG 57.062 36.000 0.00 0.00 33.15 1.90
710 769 1.148273 TTGTCTCTGCGGTGGCTTT 59.852 52.632 0.34 0.00 40.82 3.51
715 774 2.180017 CTGCGGTGGCTTTGCATC 59.820 61.111 0.00 0.00 40.82 3.91
728 787 2.044946 GCATCCCCAGCTCCGTTT 60.045 61.111 0.00 0.00 0.00 3.60
729 788 2.115291 GCATCCCCAGCTCCGTTTC 61.115 63.158 0.00 0.00 0.00 2.78
730 789 1.604378 CATCCCCAGCTCCGTTTCT 59.396 57.895 0.00 0.00 0.00 2.52
731 790 0.035056 CATCCCCAGCTCCGTTTCTT 60.035 55.000 0.00 0.00 0.00 2.52
760 820 8.821894 GTGATTACTACAATAGCAGAGAAAAGG 58.178 37.037 0.00 0.00 0.00 3.11
795 860 6.316390 CAGAACCAAAACAGAGTGAAAGTAGT 59.684 38.462 0.00 0.00 0.00 2.73
796 861 6.884836 AGAACCAAAACAGAGTGAAAGTAGTT 59.115 34.615 0.00 0.00 0.00 2.24
812 877 9.739276 TGAAAGTAGTTCAATTCTAATCCATGT 57.261 29.630 0.00 0.00 43.43 3.21
815 880 9.739276 AAGTAGTTCAATTCTAATCCATGTTGA 57.261 29.630 0.00 0.00 0.00 3.18
816 881 9.911788 AGTAGTTCAATTCTAATCCATGTTGAT 57.088 29.630 0.00 0.00 0.00 2.57
819 884 9.911788 AGTTCAATTCTAATCCATGTTGATAGT 57.088 29.630 0.00 0.00 0.00 2.12
854 919 7.815549 TCTGTTATACGTTGATTTAACTGCAGA 59.184 33.333 23.35 0.00 37.13 4.26
855 920 7.959733 TGTTATACGTTGATTTAACTGCAGAG 58.040 34.615 23.35 0.00 37.13 3.35
856 921 7.601130 TGTTATACGTTGATTTAACTGCAGAGT 59.399 33.333 23.35 10.41 37.13 3.24
857 922 9.079833 GTTATACGTTGATTTAACTGCAGAGTA 57.920 33.333 23.35 9.30 37.13 2.59
858 923 7.757097 ATACGTTGATTTAACTGCAGAGTAG 57.243 36.000 23.35 0.00 37.13 2.57
862 927 6.400091 CGTTGATTTAACTGCAGAGTAGACAC 60.400 42.308 23.35 6.90 37.13 3.67
864 929 6.701340 TGATTTAACTGCAGAGTAGACACAT 58.299 36.000 23.35 0.00 0.00 3.21
865 930 6.591448 TGATTTAACTGCAGAGTAGACACATG 59.409 38.462 23.35 0.00 0.00 3.21
895 1028 2.355009 CCACGTTTGCTTGCTGCC 60.355 61.111 0.00 0.00 42.00 4.85
896 1029 2.726912 CACGTTTGCTTGCTGCCG 60.727 61.111 0.00 0.00 42.00 5.69
897 1030 3.964875 ACGTTTGCTTGCTGCCGG 61.965 61.111 0.00 0.00 42.00 6.13
899 1032 3.605664 GTTTGCTTGCTGCCGGGT 61.606 61.111 2.18 0.00 42.00 5.28
901 1034 2.265182 TTTGCTTGCTGCCGGGTAC 61.265 57.895 2.18 0.00 42.00 3.34
902 1035 2.690653 TTTGCTTGCTGCCGGGTACT 62.691 55.000 2.18 0.00 42.00 2.73
903 1036 2.359975 GCTTGCTGCCGGGTACTT 60.360 61.111 2.18 0.00 35.15 2.24
904 1037 2.399356 GCTTGCTGCCGGGTACTTC 61.399 63.158 2.18 0.00 35.15 3.01
906 1039 1.298859 CTTGCTGCCGGGTACTTCAC 61.299 60.000 2.18 0.00 0.00 3.18
907 1040 2.813908 GCTGCCGGGTACTTCACG 60.814 66.667 2.18 0.00 43.35 4.35
909 1042 1.005394 CTGCCGGGTACTTCACGTT 60.005 57.895 2.18 0.00 41.99 3.99
910 1043 0.601841 CTGCCGGGTACTTCACGTTT 60.602 55.000 2.18 0.00 41.99 3.60
911 1044 0.881159 TGCCGGGTACTTCACGTTTG 60.881 55.000 2.18 0.00 41.99 2.93
913 1046 0.601841 CCGGGTACTTCACGTTTGCT 60.602 55.000 0.00 0.00 41.99 3.91
921 1054 4.002906 ACTTCACGTTTGCTGAGGATTA 57.997 40.909 0.00 0.00 0.00 1.75
944 1081 3.254166 GCACCATGAACTGAACAACTCAT 59.746 43.478 0.00 0.00 32.14 2.90
948 1085 6.205464 CACCATGAACTGAACAACTCATACTT 59.795 38.462 0.00 0.00 32.14 2.24
954 1091 4.202357 ACTGAACAACTCATACTTCTGCCA 60.202 41.667 0.00 0.00 32.14 4.92
964 1101 2.841442 ACTTCTGCCAGGTACTTCAC 57.159 50.000 0.00 0.00 34.60 3.18
978 1115 1.071385 ACTTCACCTTCAGAGTGCAGG 59.929 52.381 0.00 0.00 33.47 4.85
1017 1159 0.744771 GAATGGGGAAGACGAGCCAC 60.745 60.000 0.00 0.00 0.00 5.01
1032 1174 1.227823 CCACAGACGGGCTTCACAA 60.228 57.895 0.00 0.00 0.00 3.33
1180 1322 9.994432 CTGGTACTGCTTCTCTTAATTTAATTG 57.006 33.333 0.00 0.00 0.00 2.32
1181 1323 9.515226 TGGTACTGCTTCTCTTAATTTAATTGT 57.485 29.630 0.00 0.00 0.00 2.71
1211 1353 8.916654 CCACAGTTATATTAGTTATGCGAAGAG 58.083 37.037 0.00 0.00 0.00 2.85
1227 1369 7.387119 TGCGAAGAGTAAAGACAGAATAGTA 57.613 36.000 0.00 0.00 0.00 1.82
1228 1370 7.823665 TGCGAAGAGTAAAGACAGAATAGTAA 58.176 34.615 0.00 0.00 0.00 2.24
1229 1371 7.968956 TGCGAAGAGTAAAGACAGAATAGTAAG 59.031 37.037 0.00 0.00 0.00 2.34
1230 1372 7.432838 GCGAAGAGTAAAGACAGAATAGTAAGG 59.567 40.741 0.00 0.00 0.00 2.69
1343 1485 7.377766 TCACAATTCTCTAATGCTACAAACC 57.622 36.000 0.00 0.00 0.00 3.27
1561 1738 5.918011 TCAAATGAAAAACATGCGGTTCTAC 59.082 36.000 0.00 0.00 39.29 2.59
1565 1742 2.736144 AAACATGCGGTTCTACGAGA 57.264 45.000 0.00 0.00 39.29 4.04
1672 1854 8.956533 TGCTATATCAAGTTACTTGCATAACA 57.043 30.769 19.24 15.70 40.84 2.41
1895 2082 3.870274 TCATTCAGTCCTCTTGATGCAG 58.130 45.455 0.00 0.00 0.00 4.41
1971 2548 3.545703 ACTTGTTTCCTGGAGACAACTG 58.454 45.455 24.23 18.77 42.06 3.16
1983 2560 3.253432 GGAGACAACTGATGTTTTGGTCC 59.747 47.826 0.00 0.00 44.12 4.46
2013 2590 0.674895 AGAACACGGAGGAATGCAGC 60.675 55.000 0.00 0.00 0.00 5.25
2053 2630 1.333636 AAGACTCATGGAGGGCGAGG 61.334 60.000 0.00 0.00 33.35 4.63
2091 2668 2.955614 TCGAAGAAGATCCCAAACGAC 58.044 47.619 0.00 0.00 0.00 4.34
2316 2893 5.602978 CCTGGGACAAGTCTATAAGTACCAT 59.397 44.000 0.00 0.00 43.67 3.55
2416 2993 6.655425 GCTTAATGAGTATAACAATCCTCCCC 59.345 42.308 0.00 0.00 0.00 4.81
2676 3253 1.905894 GAAGGAAGGTCTTCTCAGCCT 59.094 52.381 10.13 0.00 39.84 4.58
2764 3341 1.750193 GACATCCTTCCATCGGCAAA 58.250 50.000 0.00 0.00 0.00 3.68
2986 3563 7.988737 TCCAGCTACTGATAAAAATGATGTTG 58.011 34.615 0.00 0.00 32.44 3.33
3049 3626 0.180406 AGGTGGTTTCAACAGCGACT 59.820 50.000 0.00 0.00 40.98 4.18
3267 3849 9.553064 GAGTATATTGAACATTCACAGGAAGAT 57.447 33.333 0.00 0.00 36.83 2.40
3423 4012 9.751542 AGATATTATTACAAGGAAGAAGACACG 57.248 33.333 0.00 0.00 0.00 4.49
3445 4034 3.189287 GCAACAAGGTGAGTGATTACAGG 59.811 47.826 0.00 0.00 0.00 4.00
3448 4037 4.836825 ACAAGGTGAGTGATTACAGGATG 58.163 43.478 0.00 0.00 46.00 3.51
3513 4102 3.496884 TGAATACTTGCAGACGTTGAACC 59.503 43.478 0.00 0.00 0.00 3.62
3711 4310 3.210227 TGTCTGCATTGAAGGAAACGAA 58.790 40.909 0.00 0.00 0.00 3.85
3728 4327 1.603802 CGAAAGAAGCAGCAGAACCAA 59.396 47.619 0.00 0.00 0.00 3.67
3750 4349 6.317140 CCAAGTAAAGAGCATGCTGAGATTTA 59.683 38.462 28.27 19.60 0.00 1.40
3820 4425 2.377628 AAACTCCCAGACGAAGCGCA 62.378 55.000 11.47 0.00 0.00 6.09
3852 4457 4.339247 ACCAACATCACAAGAGGAAAACTG 59.661 41.667 0.00 0.00 0.00 3.16
4092 4703 0.042281 AGTCCCCACCAGTACTACCC 59.958 60.000 0.00 0.00 0.00 3.69
4096 4707 1.192428 CCCACCAGTACTACCCAGAC 58.808 60.000 0.00 0.00 0.00 3.51
4114 4725 3.099905 AGACGATGGATCAGACCAAGAA 58.900 45.455 0.00 0.00 43.47 2.52
4116 4727 2.169352 ACGATGGATCAGACCAAGAAGG 59.831 50.000 0.00 0.00 43.47 3.46
4117 4728 2.432146 CGATGGATCAGACCAAGAAGGA 59.568 50.000 0.00 0.00 43.47 3.36
4157 4768 6.481434 AGGATGTCAGGTTAGGTTACATAC 57.519 41.667 0.00 0.00 32.56 2.39
4160 4771 6.761714 GGATGTCAGGTTAGGTTACATACAAG 59.238 42.308 0.00 0.00 32.66 3.16
4191 4802 4.928615 GGAGCTATCAGAACTATGCACATC 59.071 45.833 0.00 0.00 0.00 3.06
4216 4827 7.233553 TCCCAGAACTTAGATGTATGGTATCTG 59.766 40.741 0.00 0.00 36.38 2.90
4236 4847 4.080186 TCTGGAAGATGAATTGATCAGCCA 60.080 41.667 14.64 14.64 45.73 4.75
4252 4863 1.891150 AGCCATTGCCTGTTTGAAGAG 59.109 47.619 0.00 0.00 38.69 2.85
4323 4934 5.089970 TGCATCTGTGAAGCTATAACAGT 57.910 39.130 17.91 7.50 41.64 3.55
4430 5041 7.225538 ACCTCATCTCAGAAATAAATAAGCACG 59.774 37.037 0.00 0.00 0.00 5.34
4450 5061 2.633488 GTTGAGGGCCATCTCTGTTAC 58.367 52.381 19.75 3.61 34.98 2.50
4459 5070 3.381590 GCCATCTCTGTTACCAATTTCCC 59.618 47.826 0.00 0.00 0.00 3.97
4528 5139 2.225068 TGGATCTTCGATCGGAAAGC 57.775 50.000 16.41 0.00 33.34 3.51
4566 5177 4.952335 GGATATATGGGAATTCTTGCTGGG 59.048 45.833 5.23 0.00 0.00 4.45
4576 5187 1.679139 TCTTGCTGGGTGAACTGTTG 58.321 50.000 0.00 0.00 0.00 3.33
4594 5205 4.769688 TGTTGGAAGATGTCGCTTATGAT 58.230 39.130 0.00 0.00 0.00 2.45
4658 5270 5.106594 TGTGTGCTTGCTAATGTGAGTATTG 60.107 40.000 0.00 0.00 0.00 1.90
4659 5271 5.003160 TGTGCTTGCTAATGTGAGTATTGT 58.997 37.500 0.00 0.00 0.00 2.71
4705 5320 2.155279 GGAAGAGCCAGTGAGGTTTTC 58.845 52.381 0.00 0.00 40.61 2.29
4732 5365 0.319555 TAGTGTGCAGCTGACGGTTC 60.320 55.000 20.43 0.00 0.00 3.62
4742 5375 1.068474 CTGACGGTTCCGATGTTGTC 58.932 55.000 18.28 4.47 0.00 3.18
4749 5389 2.489971 GTTCCGATGTTGTCCTTGTGA 58.510 47.619 0.00 0.00 0.00 3.58
4750 5390 3.074412 GTTCCGATGTTGTCCTTGTGAT 58.926 45.455 0.00 0.00 0.00 3.06
4829 5469 6.151144 GCAAAATACAGTCAAAGTGATACCCT 59.849 38.462 0.00 0.00 0.00 4.34
4843 5483 5.765182 AGTGATACCCTTTTCAGTGAAGTTG 59.235 40.000 5.56 0.83 0.00 3.16
4848 5488 3.251972 CCCTTTTCAGTGAAGTTGAGAGC 59.748 47.826 5.56 0.00 0.00 4.09
4849 5489 4.133078 CCTTTTCAGTGAAGTTGAGAGCT 58.867 43.478 5.56 0.00 0.00 4.09
4851 5491 5.407995 CCTTTTCAGTGAAGTTGAGAGCTAG 59.592 44.000 5.56 0.00 0.00 3.42
4853 5493 2.893489 TCAGTGAAGTTGAGAGCTAGCA 59.107 45.455 18.83 0.00 0.00 3.49
4876 5521 3.252944 CAGTGTGCACATAATCAACACCA 59.747 43.478 24.69 0.00 0.00 4.17
4880 5525 6.377996 AGTGTGCACATAATCAACACCAATAT 59.622 34.615 24.69 0.00 0.00 1.28
4881 5526 7.555914 AGTGTGCACATAATCAACACCAATATA 59.444 33.333 24.69 0.00 0.00 0.86
4882 5527 7.643764 GTGTGCACATAATCAACACCAATATAC 59.356 37.037 24.69 0.00 0.00 1.47
4883 5528 7.337942 TGTGCACATAATCAACACCAATATACA 59.662 33.333 17.42 0.00 0.00 2.29
4884 5529 8.352201 GTGCACATAATCAACACCAATATACAT 58.648 33.333 13.17 0.00 0.00 2.29
4908 5553 9.057089 CATCATATATCATCCATTCCAGTCATG 57.943 37.037 0.00 0.00 0.00 3.07
4916 5561 2.624838 CCATTCCAGTCATGCCCATAAC 59.375 50.000 0.00 0.00 0.00 1.89
4918 5563 3.668141 TTCCAGTCATGCCCATAACAT 57.332 42.857 0.00 0.00 0.00 2.71
4919 5564 4.787135 TTCCAGTCATGCCCATAACATA 57.213 40.909 0.00 0.00 0.00 2.29
4921 5566 4.460263 TCCAGTCATGCCCATAACATAAC 58.540 43.478 0.00 0.00 0.00 1.89
4923 5568 4.276678 CCAGTCATGCCCATAACATAACAG 59.723 45.833 0.00 0.00 0.00 3.16
4924 5569 5.125356 CAGTCATGCCCATAACATAACAGA 58.875 41.667 0.00 0.00 0.00 3.41
4925 5570 5.589855 CAGTCATGCCCATAACATAACAGAA 59.410 40.000 0.00 0.00 0.00 3.02
4926 5571 5.590259 AGTCATGCCCATAACATAACAGAAC 59.410 40.000 0.00 0.00 0.00 3.01
4927 5572 5.590259 GTCATGCCCATAACATAACAGAACT 59.410 40.000 0.00 0.00 0.00 3.01
4928 5573 5.589855 TCATGCCCATAACATAACAGAACTG 59.410 40.000 0.00 0.00 0.00 3.16
4930 5575 5.754782 TGCCCATAACATAACAGAACTGAT 58.245 37.500 8.87 0.00 0.00 2.90
4931 5576 6.186957 TGCCCATAACATAACAGAACTGATT 58.813 36.000 8.87 2.63 0.00 2.57
4932 5577 6.318648 TGCCCATAACATAACAGAACTGATTC 59.681 38.462 8.87 0.00 34.78 2.52
4933 5578 6.318648 GCCCATAACATAACAGAACTGATTCA 59.681 38.462 8.87 0.00 37.29 2.57
4935 5580 8.562892 CCCATAACATAACAGAACTGATTCATC 58.437 37.037 8.87 0.00 37.29 2.92
4936 5581 9.112725 CCATAACATAACAGAACTGATTCATCA 57.887 33.333 8.87 0.00 37.29 3.07
4963 5608 7.049799 TGAAAAGTAAAGGAAATTCAGTGGG 57.950 36.000 0.00 0.00 0.00 4.61
4964 5609 5.468540 AAAGTAAAGGAAATTCAGTGGGC 57.531 39.130 0.00 0.00 0.00 5.36
4965 5610 4.112634 AGTAAAGGAAATTCAGTGGGCA 57.887 40.909 0.00 0.00 0.00 5.36
4966 5611 4.479158 AGTAAAGGAAATTCAGTGGGCAA 58.521 39.130 0.00 0.00 0.00 4.52
4967 5612 4.898861 AGTAAAGGAAATTCAGTGGGCAAA 59.101 37.500 0.00 0.00 0.00 3.68
4968 5613 4.980339 AAAGGAAATTCAGTGGGCAAAT 57.020 36.364 0.00 0.00 0.00 2.32
4969 5614 4.541973 AAGGAAATTCAGTGGGCAAATC 57.458 40.909 0.00 0.00 0.00 2.17
4970 5615 3.509442 AGGAAATTCAGTGGGCAAATCA 58.491 40.909 0.00 0.00 0.00 2.57
4971 5616 3.903090 AGGAAATTCAGTGGGCAAATCAA 59.097 39.130 0.00 0.00 0.00 2.57
4976 5621 4.478206 TTCAGTGGGCAAATCAAAACAA 57.522 36.364 0.00 0.00 0.00 2.83
4984 5630 7.173047 AGTGGGCAAATCAAAACAATAAACATC 59.827 33.333 0.00 0.00 0.00 3.06
4998 5644 8.268850 ACAATAAACATCATAGAACAGGACAC 57.731 34.615 0.00 0.00 0.00 3.67
5004 5650 4.271696 TCATAGAACAGGACACACTTGG 57.728 45.455 0.00 0.00 0.00 3.61
5011 5657 2.371841 ACAGGACACACTTGGCAGATAA 59.628 45.455 0.00 0.00 28.57 1.75
5017 5663 4.003648 ACACACTTGGCAGATAACTTAGC 58.996 43.478 0.00 0.00 0.00 3.09
5023 5669 5.598830 ACTTGGCAGATAACTTAGCTAGCTA 59.401 40.000 20.67 20.67 0.00 3.32
5041 5687 7.044798 GCTAGCTATAGGCATAATTAAGCAGT 58.955 38.462 14.13 3.94 44.79 4.40
5047 5693 5.896073 AGGCATAATTAAGCAGTAGGAGT 57.104 39.130 14.13 0.00 0.00 3.85
5051 5699 6.239629 GGCATAATTAAGCAGTAGGAGTAGGT 60.240 42.308 14.13 0.00 0.00 3.08
5067 5715 4.153411 AGTAGGTCGGATTAAGGATCAGG 58.847 47.826 0.00 0.00 36.43 3.86
5070 5718 2.039084 GGTCGGATTAAGGATCAGGCAT 59.961 50.000 0.00 0.00 36.44 4.40
5078 5726 2.431954 AGGATCAGGCATCAACCAAG 57.568 50.000 0.00 0.00 32.33 3.61
5082 5730 1.250328 TCAGGCATCAACCAAGCAAG 58.750 50.000 0.00 0.00 0.00 4.01
5089 6034 1.100463 TCAACCAAGCAAGCAAGCGA 61.100 50.000 0.00 0.00 40.15 4.93
5116 6061 2.328099 GGAACTGCGGCAAGACCAG 61.328 63.158 3.44 0.00 39.03 4.00
5124 6069 4.310288 GCAAGACCAGCCTCTTCC 57.690 61.111 0.00 0.00 0.00 3.46
5140 6088 3.761752 CTCTTCCTCTTCTTCGTCCTCTT 59.238 47.826 0.00 0.00 0.00 2.85
5204 6152 1.905843 CGGCTCCCTCTCGGATGAT 60.906 63.158 0.00 0.00 41.00 2.45
5213 6161 0.821301 TCTCGGATGATGAGCTCGCT 60.821 55.000 9.64 0.00 33.41 4.93
5217 6176 1.468908 CGGATGATGAGCTCGCTATCC 60.469 57.143 23.03 23.03 0.00 2.59
5224 6183 4.365505 GCTCGCTATCCCTCGCCC 62.366 72.222 0.00 0.00 0.00 6.13
5258 6219 5.350547 TCCCCTTCCTTTCTCTGAGAAATA 58.649 41.667 27.67 18.26 42.66 1.40
5268 6229 0.810031 CTGAGAAATACGGCCCGGTG 60.810 60.000 8.57 0.00 0.00 4.94
5269 6230 1.523032 GAGAAATACGGCCCGGTGG 60.523 63.158 8.57 0.00 0.00 4.61
5282 6243 2.675371 GGTGGCCAACCCTAGGTC 59.325 66.667 10.67 0.00 44.02 3.85
5283 6244 2.228480 GGTGGCCAACCCTAGGTCA 61.228 63.158 10.67 0.00 44.02 4.02
5284 6245 1.299976 GTGGCCAACCCTAGGTCAG 59.700 63.158 7.24 0.00 42.30 3.51
5285 6246 1.159905 TGGCCAACCCTAGGTCAGA 59.840 57.895 0.61 0.00 35.45 3.27
5286 6247 0.474854 TGGCCAACCCTAGGTCAGAA 60.475 55.000 0.61 0.00 35.45 3.02
5287 6248 0.696501 GGCCAACCCTAGGTCAGAAA 59.303 55.000 8.29 0.00 33.12 2.52
5288 6249 1.074889 GGCCAACCCTAGGTCAGAAAA 59.925 52.381 8.29 0.00 33.12 2.29
5289 6250 2.437413 GCCAACCCTAGGTCAGAAAAG 58.563 52.381 8.29 0.00 33.12 2.27
5290 6251 2.437413 CCAACCCTAGGTCAGAAAAGC 58.563 52.381 8.29 0.00 33.12 3.51
5291 6252 2.437413 CAACCCTAGGTCAGAAAAGCC 58.563 52.381 8.29 0.00 33.12 4.35
5292 6253 0.992695 ACCCTAGGTCAGAAAAGCCC 59.007 55.000 8.29 0.00 0.00 5.19
5293 6254 0.107654 CCCTAGGTCAGAAAAGCCCG 60.108 60.000 8.29 0.00 0.00 6.13
5294 6255 0.613777 CCTAGGTCAGAAAAGCCCGT 59.386 55.000 0.00 0.00 0.00 5.28
5295 6256 1.003233 CCTAGGTCAGAAAAGCCCGTT 59.997 52.381 0.00 0.00 0.00 4.44
5296 6257 2.552373 CCTAGGTCAGAAAAGCCCGTTT 60.552 50.000 0.00 0.00 0.00 3.60
5297 6258 1.318576 AGGTCAGAAAAGCCCGTTTG 58.681 50.000 0.00 0.00 0.00 2.93
5298 6259 0.318699 GGTCAGAAAAGCCCGTTTGC 60.319 55.000 0.00 0.00 0.00 3.68
5299 6260 0.383949 GTCAGAAAAGCCCGTTTGCA 59.616 50.000 0.00 0.00 0.00 4.08
5300 6261 0.383949 TCAGAAAAGCCCGTTTGCAC 59.616 50.000 0.00 0.00 0.00 4.57
5301 6262 0.102120 CAGAAAAGCCCGTTTGCACA 59.898 50.000 0.00 0.00 0.00 4.57
5302 6263 0.102300 AGAAAAGCCCGTTTGCACAC 59.898 50.000 0.00 0.00 0.00 3.82
5303 6264 0.874175 GAAAAGCCCGTTTGCACACC 60.874 55.000 0.00 0.00 0.00 4.16
5304 6265 2.621371 AAAAGCCCGTTTGCACACCG 62.621 55.000 0.00 0.00 0.00 4.94
5307 6268 4.326766 CCCGTTTGCACACCGCTG 62.327 66.667 0.00 0.00 43.06 5.18
5308 6269 4.326766 CCGTTTGCACACCGCTGG 62.327 66.667 0.00 0.00 43.06 4.85
5309 6270 4.326766 CGTTTGCACACCGCTGGG 62.327 66.667 0.00 0.00 43.06 4.45
5315 6276 2.360350 CACACCGCTGGGCTCAAT 60.360 61.111 0.00 0.00 36.48 2.57
5316 6277 1.973281 CACACCGCTGGGCTCAATT 60.973 57.895 0.00 0.00 36.48 2.32
5317 6278 1.675641 ACACCGCTGGGCTCAATTC 60.676 57.895 0.00 0.00 36.48 2.17
5318 6279 2.044946 ACCGCTGGGCTCAATTCC 60.045 61.111 0.00 0.00 36.48 3.01
5319 6280 2.045045 CCGCTGGGCTCAATTCCA 60.045 61.111 0.00 0.00 0.00 3.53
5320 6281 2.409870 CCGCTGGGCTCAATTCCAC 61.410 63.158 0.00 0.00 0.00 4.02
5321 6282 2.753966 CGCTGGGCTCAATTCCACG 61.754 63.158 0.00 0.00 0.00 4.94
5322 6283 1.675641 GCTGGGCTCAATTCCACGT 60.676 57.895 0.00 0.00 0.00 4.49
5323 6284 1.648467 GCTGGGCTCAATTCCACGTC 61.648 60.000 0.00 0.00 0.00 4.34
5324 6285 1.002624 TGGGCTCAATTCCACGTCC 60.003 57.895 0.00 0.00 0.00 4.79
5325 6286 1.749258 GGGCTCAATTCCACGTCCC 60.749 63.158 0.00 0.00 0.00 4.46
5326 6287 1.299976 GGCTCAATTCCACGTCCCT 59.700 57.895 0.00 0.00 0.00 4.20
5327 6288 0.744771 GGCTCAATTCCACGTCCCTC 60.745 60.000 0.00 0.00 0.00 4.30
5328 6289 1.084370 GCTCAATTCCACGTCCCTCG 61.084 60.000 0.00 0.00 46.00 4.63
5339 6300 0.517755 CGTCCCTCGTATGATCTCGG 59.482 60.000 0.00 0.00 34.52 4.63
5340 6301 1.606903 GTCCCTCGTATGATCTCGGT 58.393 55.000 0.00 0.00 0.00 4.69
5341 6302 1.955080 GTCCCTCGTATGATCTCGGTT 59.045 52.381 0.00 0.00 0.00 4.44
5342 6303 1.954382 TCCCTCGTATGATCTCGGTTG 59.046 52.381 0.00 0.00 0.00 3.77
5343 6304 1.000163 CCCTCGTATGATCTCGGTTGG 60.000 57.143 0.00 1.54 0.00 3.77
5344 6305 1.000163 CCTCGTATGATCTCGGTTGGG 60.000 57.143 0.00 0.00 0.00 4.12
5345 6306 0.387929 TCGTATGATCTCGGTTGGGC 59.612 55.000 0.00 0.00 0.00 5.36
5346 6307 0.600255 CGTATGATCTCGGTTGGGCC 60.600 60.000 0.00 0.00 0.00 5.80
5347 6308 0.250338 GTATGATCTCGGTTGGGCCC 60.250 60.000 17.59 17.59 0.00 5.80
5348 6309 0.692756 TATGATCTCGGTTGGGCCCA 60.693 55.000 24.45 24.45 0.00 5.36
5349 6310 1.570857 ATGATCTCGGTTGGGCCCAA 61.571 55.000 34.07 34.07 0.00 4.12
5358 6319 3.871623 TTGGGCCCAACCAATTACA 57.128 47.368 34.07 8.23 45.19 2.41
5359 6320 1.638529 TTGGGCCCAACCAATTACAG 58.361 50.000 34.07 0.00 45.19 2.74
5360 6321 0.252012 TGGGCCCAACCAATTACAGG 60.252 55.000 26.33 0.00 42.05 4.00
5361 6322 1.613317 GGGCCCAACCAATTACAGGC 61.613 60.000 19.95 0.00 42.05 4.85
5362 6323 0.614697 GGCCCAACCAATTACAGGCT 60.615 55.000 0.00 0.00 40.32 4.58
5363 6324 0.532115 GCCCAACCAATTACAGGCTG 59.468 55.000 14.16 14.16 37.42 4.85
5364 6325 1.185315 CCCAACCAATTACAGGCTGG 58.815 55.000 20.34 2.68 41.16 4.85
5365 6326 1.549950 CCCAACCAATTACAGGCTGGT 60.550 52.381 20.34 3.42 45.50 4.00
5368 6329 1.923356 ACCAATTACAGGCTGGTTGG 58.077 50.000 30.34 30.34 40.65 3.77
5369 6330 1.427368 ACCAATTACAGGCTGGTTGGA 59.573 47.619 34.82 14.67 40.65 3.53
5370 6331 1.818674 CCAATTACAGGCTGGTTGGAC 59.181 52.381 29.31 0.00 41.36 4.02
5371 6332 2.555227 CCAATTACAGGCTGGTTGGACT 60.555 50.000 29.31 9.18 41.36 3.85
5372 6333 3.308117 CCAATTACAGGCTGGTTGGACTA 60.308 47.826 29.31 8.30 41.36 2.59
5373 6334 3.629142 ATTACAGGCTGGTTGGACTAC 57.371 47.619 20.34 0.00 0.00 2.73
5374 6335 2.320681 TACAGGCTGGTTGGACTACT 57.679 50.000 20.34 0.00 0.00 2.57
5375 6336 1.435256 ACAGGCTGGTTGGACTACTT 58.565 50.000 20.34 0.00 0.00 2.24
5376 6337 1.774856 ACAGGCTGGTTGGACTACTTT 59.225 47.619 20.34 0.00 0.00 2.66
5377 6338 2.174854 ACAGGCTGGTTGGACTACTTTT 59.825 45.455 20.34 0.00 0.00 2.27
5378 6339 3.393278 ACAGGCTGGTTGGACTACTTTTA 59.607 43.478 20.34 0.00 0.00 1.52
5379 6340 4.141344 ACAGGCTGGTTGGACTACTTTTAA 60.141 41.667 20.34 0.00 0.00 1.52
5380 6341 4.825085 CAGGCTGGTTGGACTACTTTTAAA 59.175 41.667 6.61 0.00 0.00 1.52
5381 6342 5.300792 CAGGCTGGTTGGACTACTTTTAAAA 59.699 40.000 6.61 0.00 0.00 1.52
5382 6343 5.894964 AGGCTGGTTGGACTACTTTTAAAAA 59.105 36.000 1.66 0.00 0.00 1.94
5383 6344 5.981315 GGCTGGTTGGACTACTTTTAAAAAC 59.019 40.000 1.66 0.00 0.00 2.43
5384 6345 6.406065 GGCTGGTTGGACTACTTTTAAAAACA 60.406 38.462 1.66 0.00 0.00 2.83
5385 6346 7.036829 GCTGGTTGGACTACTTTTAAAAACAA 58.963 34.615 1.66 0.00 0.00 2.83
5386 6347 7.546316 GCTGGTTGGACTACTTTTAAAAACAAA 59.454 33.333 1.66 0.00 0.00 2.83
5387 6348 9.425577 CTGGTTGGACTACTTTTAAAAACAAAA 57.574 29.630 1.66 0.00 0.00 2.44
5388 6349 9.774413 TGGTTGGACTACTTTTAAAAACAAAAA 57.226 25.926 1.66 0.00 0.00 1.94
5463 6424 7.573968 ATTTCTGGAAATGTTATCTAGTGCC 57.426 36.000 7.64 0.00 39.36 5.01
5464 6425 5.036117 TCTGGAAATGTTATCTAGTGCCC 57.964 43.478 0.00 0.00 0.00 5.36
5465 6426 3.804036 TGGAAATGTTATCTAGTGCCCG 58.196 45.455 0.00 0.00 0.00 6.13
5466 6427 3.199071 TGGAAATGTTATCTAGTGCCCGT 59.801 43.478 0.00 0.00 0.00 5.28
5467 6428 4.196971 GGAAATGTTATCTAGTGCCCGTT 58.803 43.478 0.00 0.00 0.00 4.44
5468 6429 5.104859 TGGAAATGTTATCTAGTGCCCGTTA 60.105 40.000 0.00 0.00 0.00 3.18
5469 6430 5.465724 GGAAATGTTATCTAGTGCCCGTTAG 59.534 44.000 0.00 0.00 0.00 2.34
5470 6431 5.864418 AATGTTATCTAGTGCCCGTTAGA 57.136 39.130 0.00 0.00 0.00 2.10
5471 6432 4.644103 TGTTATCTAGTGCCCGTTAGAC 57.356 45.455 0.00 0.00 0.00 2.59
5472 6433 4.275810 TGTTATCTAGTGCCCGTTAGACT 58.724 43.478 0.00 0.00 0.00 3.24
5473 6434 4.708421 TGTTATCTAGTGCCCGTTAGACTT 59.292 41.667 0.00 0.00 0.00 3.01
5474 6435 5.186409 TGTTATCTAGTGCCCGTTAGACTTT 59.814 40.000 0.00 0.00 0.00 2.66
5475 6436 4.820894 ATCTAGTGCCCGTTAGACTTTT 57.179 40.909 0.00 0.00 0.00 2.27
5476 6437 5.927281 ATCTAGTGCCCGTTAGACTTTTA 57.073 39.130 0.00 0.00 0.00 1.52
5477 6438 5.320549 TCTAGTGCCCGTTAGACTTTTAG 57.679 43.478 0.00 0.00 0.00 1.85
5478 6439 3.329929 AGTGCCCGTTAGACTTTTAGG 57.670 47.619 0.00 0.00 0.00 2.69
5479 6440 1.736126 GTGCCCGTTAGACTTTTAGGC 59.264 52.381 0.00 0.00 39.41 3.93
5480 6441 1.626825 TGCCCGTTAGACTTTTAGGCT 59.373 47.619 0.00 0.00 39.68 4.58
5481 6442 2.007608 GCCCGTTAGACTTTTAGGCTG 58.992 52.381 0.00 0.00 32.21 4.85
5482 6443 2.614734 GCCCGTTAGACTTTTAGGCTGT 60.615 50.000 0.00 0.00 32.21 4.40
5483 6444 3.671716 CCCGTTAGACTTTTAGGCTGTT 58.328 45.455 0.00 0.00 32.21 3.16
5484 6445 3.683340 CCCGTTAGACTTTTAGGCTGTTC 59.317 47.826 0.00 0.00 32.21 3.18
5485 6446 3.683340 CCGTTAGACTTTTAGGCTGTTCC 59.317 47.826 0.00 0.00 32.21 3.62
5486 6447 4.312443 CGTTAGACTTTTAGGCTGTTCCA 58.688 43.478 0.00 0.00 32.21 3.53
5487 6448 4.389077 CGTTAGACTTTTAGGCTGTTCCAG 59.611 45.833 0.00 0.00 32.21 3.86
5500 6461 0.521735 GTTCCAGCGAACACATTCCC 59.478 55.000 0.19 0.00 46.49 3.97
5501 6462 0.400213 TTCCAGCGAACACATTCCCT 59.600 50.000 0.00 0.00 0.00 4.20
5502 6463 0.321564 TCCAGCGAACACATTCCCTG 60.322 55.000 0.00 0.00 39.50 4.45
5503 6464 1.503542 CAGCGAACACATTCCCTGC 59.496 57.895 0.00 0.00 34.74 4.85
5504 6465 0.957395 CAGCGAACACATTCCCTGCT 60.957 55.000 0.00 0.00 34.74 4.24
5505 6466 0.957395 AGCGAACACATTCCCTGCTG 60.957 55.000 0.00 0.00 30.60 4.41
5506 6467 1.237285 GCGAACACATTCCCTGCTGT 61.237 55.000 0.00 0.00 0.00 4.40
5507 6468 1.238439 CGAACACATTCCCTGCTGTT 58.762 50.000 0.00 0.00 34.17 3.16
5508 6469 1.069022 CGAACACATTCCCTGCTGTTG 60.069 52.381 0.00 0.00 32.71 3.33
5509 6470 0.675633 AACACATTCCCTGCTGTTGC 59.324 50.000 0.00 0.00 40.20 4.17
5511 6472 0.038892 CACATTCCCTGCTGTTGCAC 60.039 55.000 0.00 0.00 45.31 4.57
5512 6473 1.210931 CATTCCCTGCTGTTGCACG 59.789 57.895 0.00 0.00 45.31 5.34
5513 6474 1.073025 ATTCCCTGCTGTTGCACGA 59.927 52.632 0.00 0.00 45.31 4.35
5514 6475 0.537143 ATTCCCTGCTGTTGCACGAA 60.537 50.000 0.00 0.00 45.31 3.85
5515 6476 0.537143 TTCCCTGCTGTTGCACGAAT 60.537 50.000 0.00 0.00 45.31 3.34
5516 6477 0.955428 TCCCTGCTGTTGCACGAATC 60.955 55.000 0.00 0.00 45.31 2.52
5517 6478 0.957395 CCCTGCTGTTGCACGAATCT 60.957 55.000 0.00 0.00 45.31 2.40
5518 6479 0.877071 CCTGCTGTTGCACGAATCTT 59.123 50.000 0.00 0.00 45.31 2.40
5519 6480 1.400629 CCTGCTGTTGCACGAATCTTG 60.401 52.381 0.00 0.00 45.31 3.02
5520 6481 1.532437 CTGCTGTTGCACGAATCTTGA 59.468 47.619 0.00 0.00 45.31 3.02
5521 6482 2.153645 TGCTGTTGCACGAATCTTGAT 58.846 42.857 0.00 0.00 45.31 2.57
5522 6483 2.095617 TGCTGTTGCACGAATCTTGATG 60.096 45.455 0.00 0.00 45.31 3.07
5523 6484 2.512885 CTGTTGCACGAATCTTGATGC 58.487 47.619 0.00 0.00 38.59 3.91
5524 6485 1.878734 TGTTGCACGAATCTTGATGCA 59.121 42.857 0.00 0.00 45.94 3.96
5527 6488 2.932498 TGCACGAATCTTGATGCAAAC 58.068 42.857 0.00 0.00 44.72 2.93
5528 6489 2.253603 GCACGAATCTTGATGCAAACC 58.746 47.619 0.00 0.00 38.00 3.27
5529 6490 2.351641 GCACGAATCTTGATGCAAACCA 60.352 45.455 0.00 0.00 38.00 3.67
5530 6491 3.674138 GCACGAATCTTGATGCAAACCAT 60.674 43.478 0.00 0.00 38.00 3.55
5531 6492 3.855379 CACGAATCTTGATGCAAACCATG 59.145 43.478 0.00 0.00 33.29 3.66
5532 6493 3.507233 ACGAATCTTGATGCAAACCATGT 59.493 39.130 0.00 0.00 33.29 3.21
5533 6494 3.855379 CGAATCTTGATGCAAACCATGTG 59.145 43.478 0.00 0.00 33.29 3.21
5534 6495 4.616604 CGAATCTTGATGCAAACCATGTGT 60.617 41.667 0.00 0.00 33.29 3.72
5535 6496 3.921119 TCTTGATGCAAACCATGTGTC 57.079 42.857 0.00 0.00 33.29 3.67
5536 6497 3.220940 TCTTGATGCAAACCATGTGTCA 58.779 40.909 0.00 0.00 33.29 3.58
5537 6498 3.253921 TCTTGATGCAAACCATGTGTCAG 59.746 43.478 0.00 0.00 33.29 3.51
5538 6499 1.887854 TGATGCAAACCATGTGTCAGG 59.112 47.619 0.00 0.00 33.29 3.86
5539 6500 1.888512 GATGCAAACCATGTGTCAGGT 59.111 47.619 0.00 0.00 40.61 4.00
5540 6501 1.317613 TGCAAACCATGTGTCAGGTC 58.682 50.000 0.00 0.00 37.07 3.85
5541 6502 1.317613 GCAAACCATGTGTCAGGTCA 58.682 50.000 0.00 0.00 37.07 4.02
5542 6503 1.267806 GCAAACCATGTGTCAGGTCAG 59.732 52.381 0.00 0.00 37.07 3.51
5543 6504 1.267806 CAAACCATGTGTCAGGTCAGC 59.732 52.381 0.00 0.00 37.07 4.26
5544 6505 0.767375 AACCATGTGTCAGGTCAGCT 59.233 50.000 0.00 0.00 37.07 4.24
5545 6506 0.322975 ACCATGTGTCAGGTCAGCTC 59.677 55.000 0.00 0.00 30.79 4.09
5546 6507 0.612229 CCATGTGTCAGGTCAGCTCT 59.388 55.000 0.00 0.00 0.00 4.09
5547 6508 1.405256 CCATGTGTCAGGTCAGCTCTC 60.405 57.143 0.00 0.00 0.00 3.20
5548 6509 1.549620 CATGTGTCAGGTCAGCTCTCT 59.450 52.381 0.00 0.00 0.00 3.10
5549 6510 0.964700 TGTGTCAGGTCAGCTCTCTG 59.035 55.000 0.00 0.00 41.67 3.35
5550 6511 0.246086 GTGTCAGGTCAGCTCTCTGG 59.754 60.000 7.40 0.00 40.69 3.86
5551 6512 1.217779 GTCAGGTCAGCTCTCTGGC 59.782 63.158 7.40 2.82 44.00 4.85
5552 6513 2.183811 CAGGTCAGCTCTCTGGCG 59.816 66.667 0.00 0.00 45.62 5.69
5553 6514 2.283532 AGGTCAGCTCTCTGGCGT 60.284 61.111 0.00 0.00 45.62 5.68
5554 6515 2.183046 GGTCAGCTCTCTGGCGTC 59.817 66.667 0.00 0.00 45.62 5.19
5555 6516 2.202544 GTCAGCTCTCTGGCGTCG 60.203 66.667 0.00 0.00 40.69 5.12
5556 6517 2.673341 TCAGCTCTCTGGCGTCGT 60.673 61.111 0.00 0.00 40.69 4.34
5557 6518 2.259818 CAGCTCTCTGGCGTCGTT 59.740 61.111 0.00 0.00 36.68 3.85
5558 6519 1.803519 CAGCTCTCTGGCGTCGTTC 60.804 63.158 0.00 0.00 36.68 3.95
5559 6520 2.876645 GCTCTCTGGCGTCGTTCG 60.877 66.667 0.00 0.00 43.12 3.95
5568 6529 4.303853 CGTCGTTCGCTATCCCAG 57.696 61.111 0.00 0.00 0.00 4.45
5569 6530 1.725665 CGTCGTTCGCTATCCCAGA 59.274 57.895 0.00 0.00 0.00 3.86
5570 6531 0.311165 CGTCGTTCGCTATCCCAGAT 59.689 55.000 0.00 0.00 0.00 2.90
5571 6532 1.534163 CGTCGTTCGCTATCCCAGATA 59.466 52.381 0.00 0.00 0.00 1.98
5572 6533 2.161808 CGTCGTTCGCTATCCCAGATAT 59.838 50.000 0.00 0.00 0.00 1.63
5573 6534 3.373130 CGTCGTTCGCTATCCCAGATATA 59.627 47.826 0.00 0.00 0.00 0.86
5574 6535 4.660105 GTCGTTCGCTATCCCAGATATAC 58.340 47.826 0.00 0.00 0.00 1.47
5575 6536 4.395542 GTCGTTCGCTATCCCAGATATACT 59.604 45.833 0.00 0.00 0.00 2.12
5576 6537 4.395231 TCGTTCGCTATCCCAGATATACTG 59.605 45.833 0.00 0.00 45.36 2.74
5585 6546 2.795175 CAGATATACTGGCGAACGGT 57.205 50.000 0.00 0.00 42.39 4.83
5586 6547 3.093717 CAGATATACTGGCGAACGGTT 57.906 47.619 0.00 0.00 42.39 4.44
5587 6548 3.050619 CAGATATACTGGCGAACGGTTC 58.949 50.000 10.83 10.83 42.39 3.62
5588 6549 2.035576 AGATATACTGGCGAACGGTTCC 59.964 50.000 14.83 7.85 39.94 3.62
5589 6550 1.477553 TATACTGGCGAACGGTTCCT 58.522 50.000 14.83 0.00 39.94 3.36
5590 6551 1.477553 ATACTGGCGAACGGTTCCTA 58.522 50.000 14.83 5.48 39.94 2.94
5591 6552 0.813184 TACTGGCGAACGGTTCCTAG 59.187 55.000 14.83 15.39 39.94 3.02
5592 6553 1.153628 CTGGCGAACGGTTCCTAGG 60.154 63.158 14.83 0.82 0.00 3.02
5593 6554 2.186125 GGCGAACGGTTCCTAGGG 59.814 66.667 14.83 2.18 0.00 3.53
5594 6555 2.353610 GGCGAACGGTTCCTAGGGA 61.354 63.158 14.83 0.00 0.00 4.20
5595 6556 1.593265 GCGAACGGTTCCTAGGGAA 59.407 57.895 14.83 0.00 39.66 3.97
5596 6557 0.177373 GCGAACGGTTCCTAGGGAAT 59.823 55.000 14.83 0.00 44.04 3.01
5597 6558 1.410153 GCGAACGGTTCCTAGGGAATA 59.590 52.381 14.83 0.00 44.04 1.75
5598 6559 2.545322 GCGAACGGTTCCTAGGGAATAG 60.545 54.545 14.83 0.00 44.04 1.73
5599 6560 2.954318 CGAACGGTTCCTAGGGAATAGA 59.046 50.000 14.83 0.00 44.04 1.98
5600 6561 3.382546 CGAACGGTTCCTAGGGAATAGAA 59.617 47.826 14.83 0.00 44.04 2.10
5601 6562 4.691175 GAACGGTTCCTAGGGAATAGAAC 58.309 47.826 9.46 4.55 44.04 3.01
5602 6563 3.991683 ACGGTTCCTAGGGAATAGAACT 58.008 45.455 9.46 0.00 44.04 3.01
5603 6564 4.359996 ACGGTTCCTAGGGAATAGAACTT 58.640 43.478 9.46 0.00 44.04 2.66
5604 6565 4.161754 ACGGTTCCTAGGGAATAGAACTTG 59.838 45.833 9.46 4.80 44.04 3.16
5605 6566 4.443034 CGGTTCCTAGGGAATAGAACTTGG 60.443 50.000 9.46 0.00 44.04 3.61
5606 6567 4.141459 GGTTCCTAGGGAATAGAACTTGGG 60.141 50.000 9.46 0.00 44.04 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 8.868916 GCATCGTACCATCAATTTGTTTATTTT 58.131 29.630 0.00 0.00 0.00 1.82
26 27 3.945346 TGTGGTAAAAGCATCGTACCAT 58.055 40.909 10.58 0.00 46.70 3.55
28 29 3.126343 CCTTGTGGTAAAAGCATCGTACC 59.874 47.826 0.00 0.00 38.23 3.34
32 33 1.812571 AGCCTTGTGGTAAAAGCATCG 59.187 47.619 0.00 0.00 35.27 3.84
73 74 8.416329 GGTTGATAATTGTCCTTGAAGCATATT 58.584 33.333 0.00 0.00 0.00 1.28
133 138 2.176812 ATGCTTTTCCCCCACCCCT 61.177 57.895 0.00 0.00 0.00 4.79
223 230 1.743252 GGACAGGTGTAGCAGCAGC 60.743 63.158 0.00 0.00 42.56 5.25
224 231 1.446792 CGGACAGGTGTAGCAGCAG 60.447 63.158 0.00 0.00 33.95 4.24
225 232 2.154798 GACGGACAGGTGTAGCAGCA 62.155 60.000 0.00 0.00 33.95 4.41
226 233 1.446272 GACGGACAGGTGTAGCAGC 60.446 63.158 0.00 0.00 0.00 5.25
227 234 1.154016 CGACGGACAGGTGTAGCAG 60.154 63.158 0.00 0.00 0.00 4.24
228 235 2.959372 CGACGGACAGGTGTAGCA 59.041 61.111 0.00 0.00 0.00 3.49
262 281 4.175337 TAGCGTGGAGGGGCATGC 62.175 66.667 9.90 9.90 0.00 4.06
263 282 2.109799 CTAGCGTGGAGGGGCATG 59.890 66.667 0.00 0.00 0.00 4.06
264 283 3.866582 GCTAGCGTGGAGGGGCAT 61.867 66.667 0.00 0.00 0.00 4.40
276 295 1.238439 TTGTGCTTTGTGGAGCTAGC 58.762 50.000 6.62 6.62 43.11 3.42
278 297 3.141398 CTCTTTGTGCTTTGTGGAGCTA 58.859 45.455 0.00 0.00 43.11 3.32
292 311 5.324832 TTCAATCTTCTTCCCCTCTTTGT 57.675 39.130 0.00 0.00 0.00 2.83
339 395 1.002033 CTTTTCTTGCTTGCTCGCACT 60.002 47.619 0.00 0.00 40.09 4.40
355 411 5.639139 AGGAATCAGAAGAAGAAGCCTTTT 58.361 37.500 0.00 0.00 31.62 2.27
366 422 3.777522 GGAGGAAGGAAGGAATCAGAAGA 59.222 47.826 0.00 0.00 0.00 2.87
421 477 4.798344 CCAGCTGGCTGCCCTGAG 62.798 72.222 22.33 12.35 44.23 3.35
425 481 4.437587 ATGACCAGCTGGCTGCCC 62.438 66.667 33.06 16.35 44.23 5.36
426 482 3.138798 CATGACCAGCTGGCTGCC 61.139 66.667 33.06 18.81 44.23 4.85
427 483 3.138798 CCATGACCAGCTGGCTGC 61.139 66.667 33.06 21.66 42.35 5.25
431 487 1.826921 GGATGCCATGACCAGCTGG 60.827 63.158 31.60 31.60 42.17 4.85
439 495 1.410507 CCATGTCAAGGGATGCCATGA 60.411 52.381 7.13 7.13 0.00 3.07
441 497 0.757935 GCCATGTCAAGGGATGCCAT 60.758 55.000 5.86 0.00 0.00 4.40
443 499 2.129785 GGCCATGTCAAGGGATGCC 61.130 63.158 0.00 0.00 0.00 4.40
453 509 1.099879 GGCATGTCTCTGGCCATGTC 61.100 60.000 5.51 0.00 46.92 3.06
468 524 0.252881 TGAGAGGTCCTTCAGGGCAT 60.253 55.000 0.00 0.00 42.93 4.40
469 525 0.252881 ATGAGAGGTCCTTCAGGGCA 60.253 55.000 0.00 0.00 42.93 5.36
470 526 0.179936 CATGAGAGGTCCTTCAGGGC 59.820 60.000 0.00 0.00 39.63 5.19
471 527 0.835941 CCATGAGAGGTCCTTCAGGG 59.164 60.000 15.64 15.64 35.41 4.45
472 528 1.577736 ACCATGAGAGGTCCTTCAGG 58.422 55.000 0.00 1.04 37.28 3.86
473 529 2.355513 CCAACCATGAGAGGTCCTTCAG 60.356 54.545 0.00 0.00 42.25 3.02
474 530 1.630369 CCAACCATGAGAGGTCCTTCA 59.370 52.381 0.00 0.00 42.25 3.02
475 531 1.630878 ACCAACCATGAGAGGTCCTTC 59.369 52.381 0.00 0.00 42.25 3.46
476 532 1.747444 ACCAACCATGAGAGGTCCTT 58.253 50.000 0.00 0.00 42.25 3.36
477 533 1.352352 CAACCAACCATGAGAGGTCCT 59.648 52.381 0.00 0.00 42.25 3.85
478 534 1.826385 CAACCAACCATGAGAGGTCC 58.174 55.000 0.00 0.00 42.25 4.46
479 535 1.168714 GCAACCAACCATGAGAGGTC 58.831 55.000 0.00 0.00 42.25 3.85
480 536 0.773644 AGCAACCAACCATGAGAGGT 59.226 50.000 0.00 0.00 45.91 3.85
481 537 1.815003 GAAGCAACCAACCATGAGAGG 59.185 52.381 0.00 0.00 0.00 3.69
482 538 1.815003 GGAAGCAACCAACCATGAGAG 59.185 52.381 0.00 0.00 0.00 3.20
505 561 3.719479 AGAGGACTAGATAGAGGAGTGCA 59.281 47.826 0.00 0.00 34.29 4.57
516 572 2.495270 CAGCACACACAGAGGACTAGAT 59.505 50.000 0.00 0.00 0.00 1.98
517 573 1.889170 CAGCACACACAGAGGACTAGA 59.111 52.381 0.00 0.00 0.00 2.43
524 580 1.549620 AGGAGATCAGCACACACAGAG 59.450 52.381 0.00 0.00 0.00 3.35
526 582 1.274447 TGAGGAGATCAGCACACACAG 59.726 52.381 0.00 0.00 32.77 3.66
531 587 0.749049 CCGATGAGGAGATCAGCACA 59.251 55.000 0.00 0.00 44.87 4.57
532 588 0.599728 GCCGATGAGGAGATCAGCAC 60.600 60.000 0.00 0.00 44.87 4.40
533 589 0.758310 AGCCGATGAGGAGATCAGCA 60.758 55.000 0.00 0.00 44.87 4.41
534 590 0.038343 GAGCCGATGAGGAGATCAGC 60.038 60.000 0.00 0.00 42.53 4.26
535 591 0.240678 CGAGCCGATGAGGAGATCAG 59.759 60.000 0.00 0.00 42.53 2.90
536 592 1.175347 CCGAGCCGATGAGGAGATCA 61.175 60.000 0.00 0.00 45.00 2.92
537 593 0.891449 TCCGAGCCGATGAGGAGATC 60.891 60.000 0.00 0.00 45.00 2.75
538 594 1.151679 TCCGAGCCGATGAGGAGAT 59.848 57.895 0.00 0.00 45.00 2.75
539 595 2.595655 TCCGAGCCGATGAGGAGA 59.404 61.111 0.00 0.00 45.00 3.71
546 604 3.288290 CCGTAGCTCCGAGCCGAT 61.288 66.667 16.99 1.18 43.77 4.18
561 619 0.108138 AGAAGATGAAGAACCGCCCG 60.108 55.000 0.00 0.00 0.00 6.13
562 620 2.010497 GAAGAAGATGAAGAACCGCCC 58.990 52.381 0.00 0.00 0.00 6.13
606 664 8.854614 AGTATAACAAGAAAGAATTGCTCACT 57.145 30.769 0.00 0.00 0.00 3.41
612 670 8.734386 AGGCAAGAGTATAACAAGAAAGAATTG 58.266 33.333 0.00 0.00 0.00 2.32
642 700 2.110578 GGAAACCCAGCCAGCAATATT 58.889 47.619 0.00 0.00 0.00 1.28
643 701 1.780503 GGAAACCCAGCCAGCAATAT 58.219 50.000 0.00 0.00 0.00 1.28
644 702 3.281332 GGAAACCCAGCCAGCAATA 57.719 52.632 0.00 0.00 0.00 1.90
645 703 4.118584 GGAAACCCAGCCAGCAAT 57.881 55.556 0.00 0.00 0.00 3.56
652 710 8.397096 GTTAGAAAACAAGAGGGAAACCCAGC 62.397 46.154 9.59 1.03 43.19 4.85
653 711 5.009710 GTTAGAAAACAAGAGGGAAACCCAG 59.990 44.000 9.59 0.00 43.19 4.45
654 712 4.891168 GTTAGAAAACAAGAGGGAAACCCA 59.109 41.667 9.59 0.00 43.19 4.51
655 713 4.280174 GGTTAGAAAACAAGAGGGAAACCC 59.720 45.833 0.00 0.00 44.68 4.11
656 714 4.891168 TGGTTAGAAAACAAGAGGGAAACC 59.109 41.667 0.00 0.00 44.20 3.27
657 715 6.650427 ATGGTTAGAAAACAAGAGGGAAAC 57.350 37.500 0.00 0.00 37.34 2.78
658 716 8.802267 CATTATGGTTAGAAAACAAGAGGGAAA 58.198 33.333 0.00 0.00 37.34 3.13
659 717 8.167392 TCATTATGGTTAGAAAACAAGAGGGAA 58.833 33.333 0.00 0.00 37.34 3.97
660 718 7.695055 TCATTATGGTTAGAAAACAAGAGGGA 58.305 34.615 0.00 0.00 37.34 4.20
661 719 7.938140 TCATTATGGTTAGAAAACAAGAGGG 57.062 36.000 0.00 0.00 37.34 4.30
673 731 9.823647 AGAGACAACTTGTATCATTATGGTTAG 57.176 33.333 16.84 0.00 40.78 2.34
674 732 9.599866 CAGAGACAACTTGTATCATTATGGTTA 57.400 33.333 16.84 0.00 40.78 2.85
684 742 2.668457 CACCGCAGAGACAACTTGTATC 59.332 50.000 8.27 8.27 38.77 2.24
710 769 2.819984 GAAACGGAGCTGGGGATGCA 62.820 60.000 0.00 0.00 0.00 3.96
715 774 0.674895 CAGAAGAAACGGAGCTGGGG 60.675 60.000 0.00 0.00 0.00 4.96
728 787 8.293699 TCTGCTATTGTAGTAATCACAGAAGA 57.706 34.615 0.00 0.00 0.00 2.87
729 788 8.409371 TCTCTGCTATTGTAGTAATCACAGAAG 58.591 37.037 0.00 0.00 31.80 2.85
730 789 8.293699 TCTCTGCTATTGTAGTAATCACAGAA 57.706 34.615 0.00 0.00 31.80 3.02
731 790 7.881775 TCTCTGCTATTGTAGTAATCACAGA 57.118 36.000 0.00 0.00 0.00 3.41
760 820 3.445805 TGTTTTGGTTCTGACCCTTGTTC 59.554 43.478 0.00 0.00 45.92 3.18
825 890 9.769093 GCAGTTAAATCAACGTATAACAGAATT 57.231 29.630 0.00 0.00 42.35 2.17
826 891 8.941977 TGCAGTTAAATCAACGTATAACAGAAT 58.058 29.630 0.00 0.00 42.35 2.40
827 892 8.312896 TGCAGTTAAATCAACGTATAACAGAA 57.687 30.769 0.00 0.00 42.35 3.02
828 893 7.815549 TCTGCAGTTAAATCAACGTATAACAGA 59.184 33.333 14.67 0.00 42.35 3.41
834 899 7.488471 GTCTACTCTGCAGTTAAATCAACGTAT 59.512 37.037 14.67 0.00 42.35 3.06
842 907 5.352569 GCATGTGTCTACTCTGCAGTTAAAT 59.647 40.000 14.67 0.00 36.68 1.40
844 909 4.245660 GCATGTGTCTACTCTGCAGTTAA 58.754 43.478 14.67 0.00 36.68 2.01
846 911 2.037641 TGCATGTGTCTACTCTGCAGTT 59.962 45.455 14.67 4.66 39.51 3.16
847 912 1.620323 TGCATGTGTCTACTCTGCAGT 59.380 47.619 14.67 0.00 39.51 4.40
848 913 2.375173 TGCATGTGTCTACTCTGCAG 57.625 50.000 7.63 7.63 39.51 4.41
849 914 3.339253 AATGCATGTGTCTACTCTGCA 57.661 42.857 0.00 9.45 44.33 4.41
850 915 4.394300 AGAAAATGCATGTGTCTACTCTGC 59.606 41.667 0.00 0.00 36.98 4.26
876 1009 1.226945 GCAGCAAGCAAACGTGGTT 60.227 52.632 0.00 0.00 46.28 3.67
895 1028 0.511221 CAGCAAACGTGAAGTACCCG 59.489 55.000 0.00 0.00 0.00 5.28
896 1029 1.798813 CTCAGCAAACGTGAAGTACCC 59.201 52.381 0.00 0.00 0.00 3.69
897 1030 1.798813 CCTCAGCAAACGTGAAGTACC 59.201 52.381 0.00 0.00 0.00 3.34
899 1032 3.678056 ATCCTCAGCAAACGTGAAGTA 57.322 42.857 0.00 0.00 0.00 2.24
901 1034 3.181516 GCTAATCCTCAGCAAACGTGAAG 60.182 47.826 0.00 0.00 38.93 3.02
902 1035 2.742053 GCTAATCCTCAGCAAACGTGAA 59.258 45.455 0.00 0.00 38.93 3.18
903 1036 2.289382 TGCTAATCCTCAGCAAACGTGA 60.289 45.455 0.00 0.00 45.71 4.35
904 1037 2.076100 TGCTAATCCTCAGCAAACGTG 58.924 47.619 0.00 0.00 45.71 4.49
910 1043 1.839354 TCATGGTGCTAATCCTCAGCA 59.161 47.619 0.00 0.00 46.47 4.41
911 1044 2.615912 GTTCATGGTGCTAATCCTCAGC 59.384 50.000 0.00 0.00 39.56 4.26
913 1046 3.519107 TCAGTTCATGGTGCTAATCCTCA 59.481 43.478 0.00 0.00 0.00 3.86
921 1054 2.880890 GAGTTGTTCAGTTCATGGTGCT 59.119 45.455 0.00 0.00 0.00 4.40
944 1081 2.565834 GGTGAAGTACCTGGCAGAAGTA 59.434 50.000 17.94 7.84 46.51 2.24
964 1101 2.828520 TCTTCTACCTGCACTCTGAAGG 59.171 50.000 12.07 0.00 37.11 3.46
978 1115 4.516365 TCTCTCGGTGGTTTTCTTCTAC 57.484 45.455 0.00 0.00 0.00 2.59
1017 1159 0.804989 GGATTTGTGAAGCCCGTCTG 59.195 55.000 0.00 0.00 35.24 3.51
1027 1169 6.461370 CCAACATTGTTCTCTTGGATTTGTGA 60.461 38.462 0.00 0.00 36.06 3.58
1032 1174 4.281688 CACCCAACATTGTTCTCTTGGATT 59.718 41.667 0.00 0.00 36.06 3.01
1186 1328 9.464714 ACTCTTCGCATAACTAATATAACTGTG 57.535 33.333 0.00 0.00 0.00 3.66
1205 1347 8.675504 TCCTTACTATTCTGTCTTTACTCTTCG 58.324 37.037 0.00 0.00 0.00 3.79
1227 1369 9.787435 CACTTATCTAGATCACTACTACTCCTT 57.213 37.037 8.95 0.00 0.00 3.36
1228 1370 8.380099 CCACTTATCTAGATCACTACTACTCCT 58.620 40.741 8.95 0.00 0.00 3.69
1229 1371 7.608761 CCCACTTATCTAGATCACTACTACTCC 59.391 44.444 8.95 0.00 0.00 3.85
1230 1372 8.158789 ACCCACTTATCTAGATCACTACTACTC 58.841 40.741 8.95 0.00 0.00 2.59
1232 1374 9.439500 CTACCCACTTATCTAGATCACTACTAC 57.561 40.741 8.95 0.00 0.00 2.73
1343 1485 3.450457 AGTTCTAGAGGGATCAGTTGCTG 59.550 47.826 0.00 0.00 0.00 4.41
1394 1536 6.488006 ACAACAAGAAGCTTGAGTGATGTATT 59.512 34.615 2.10 0.00 0.00 1.89
1672 1854 2.687935 ACCACAAGTCACAGCGATTTTT 59.312 40.909 0.00 0.00 0.00 1.94
1895 2082 5.755861 AGAAAAGCTTGAACAGAGTCTGTAC 59.244 40.000 25.71 12.85 44.62 2.90
1971 2548 6.655003 TCTGAGAAATACAGGACCAAAACATC 59.345 38.462 0.00 0.00 36.22 3.06
1983 2560 4.082190 TCCTCCGTGTTCTGAGAAATACAG 60.082 45.833 0.00 0.00 36.80 2.74
2013 2590 4.868450 TTTGACAGTTGGTTTCGTAGTG 57.132 40.909 0.00 0.00 0.00 2.74
2053 2630 1.526464 CGAATGTTTTGGCTTGCCAAC 59.474 47.619 24.65 16.37 0.00 3.77
2091 2668 3.313526 CAGCCAATATCCTTTGAACCTCG 59.686 47.826 0.00 0.00 0.00 4.63
2316 2893 0.820482 CATCATGCGGCCCTTCATCA 60.820 55.000 0.00 0.00 0.00 3.07
2416 2993 6.307155 GTGTTTTCTGATAATCAAGGTCACG 58.693 40.000 0.00 0.00 0.00 4.35
2543 3120 5.123820 TGATTTGAAGCCTTTGTATCTTCGG 59.876 40.000 0.00 0.00 39.12 4.30
2544 3121 6.182039 TGATTTGAAGCCTTTGTATCTTCG 57.818 37.500 0.00 0.00 39.12 3.79
2616 3193 8.048534 TGCTTGATTTATCTTTCTTCCAGAAG 57.951 34.615 0.73 0.73 35.37 2.85
2764 3341 1.425066 TGGAGCTTGAATTCCACCTGT 59.575 47.619 2.27 0.00 38.53 4.00
2986 3563 3.630312 TGTTTACTGCTGTTTGAAGGTCC 59.370 43.478 0.09 0.00 0.00 4.46
3028 3605 1.529865 GTCGCTGTTGAAACCACCTAC 59.470 52.381 0.00 0.00 0.00 3.18
3049 3626 5.869579 GGATGCATCCTTTGAGGTAGATAA 58.130 41.667 34.20 0.00 43.73 1.75
3423 4012 3.189287 CCTGTAATCACTCACCTTGTTGC 59.811 47.826 0.00 0.00 0.00 4.17
3484 4073 8.194769 TCAACGTCTGCAAGTATTCATATTCTA 58.805 33.333 0.00 0.00 33.76 2.10
3513 4102 8.446273 CAGTTTCTTCAATACAACCAGTATCAG 58.554 37.037 0.00 0.00 42.56 2.90
3711 4310 2.355010 ACTTGGTTCTGCTGCTTCTT 57.645 45.000 0.00 0.00 0.00 2.52
3728 4327 6.709846 GGATAAATCTCAGCATGCTCTTTACT 59.290 38.462 19.68 4.12 34.76 2.24
3820 4425 3.507162 TGTGATGTTGGTCCAAGTGAT 57.493 42.857 3.96 0.00 0.00 3.06
3852 4457 1.408702 TGGGTTGCTCTTGCTTTTCAC 59.591 47.619 0.00 0.00 40.48 3.18
3970 4576 5.822519 TGAAGGTCAATGGTTAGCATACATC 59.177 40.000 0.00 0.00 0.00 3.06
3980 4586 5.930837 TGTTTTTCTGAAGGTCAATGGTT 57.069 34.783 0.00 0.00 0.00 3.67
4092 4703 2.428530 TCTTGGTCTGATCCATCGTCTG 59.571 50.000 0.00 0.00 37.33 3.51
4096 4707 2.432146 TCCTTCTTGGTCTGATCCATCG 59.568 50.000 0.00 0.00 37.33 3.84
4114 4725 2.649742 TGTCCTCCCAGAAGATTCCT 57.350 50.000 0.00 0.00 0.00 3.36
4116 4727 2.840651 TCCTTGTCCTCCCAGAAGATTC 59.159 50.000 0.00 0.00 0.00 2.52
4117 4728 2.921221 TCCTTGTCCTCCCAGAAGATT 58.079 47.619 0.00 0.00 0.00 2.40
4157 4768 1.297664 GATAGCTCCAGCACTGCTTG 58.702 55.000 0.00 0.00 45.16 4.01
4160 4771 0.463204 TCTGATAGCTCCAGCACTGC 59.537 55.000 10.30 0.00 45.16 4.40
4191 4802 7.382110 CAGATACCATACATCTAAGTTCTGGG 58.618 42.308 0.00 0.00 31.48 4.45
4216 4827 5.529791 CAATGGCTGATCAATTCATCTTCC 58.470 41.667 0.00 0.00 32.72 3.46
4236 4847 3.754965 TGTAGCTCTTCAAACAGGCAAT 58.245 40.909 0.00 0.00 0.00 3.56
4252 4863 2.854963 TGATGATTGCCCTGATGTAGC 58.145 47.619 0.00 0.00 0.00 3.58
4323 4934 5.068215 TCCAAAGTGTTTCCCCTGAATTA 57.932 39.130 0.00 0.00 0.00 1.40
4430 5041 2.633488 GTAACAGAGATGGCCCTCAAC 58.367 52.381 10.92 4.19 35.68 3.18
4450 5061 3.328505 GTTCAATGTGCTGGGAAATTGG 58.671 45.455 5.42 0.00 32.17 3.16
4459 5070 2.430465 ACTAGCTGGTTCAATGTGCTG 58.570 47.619 0.00 0.00 35.47 4.41
4502 5113 2.064762 CGATCGAAGATCCATCCAAGC 58.935 52.381 10.26 0.00 45.12 4.01
4528 5139 5.465051 CATATATCCACAACAGTCTCCTCG 58.535 45.833 0.00 0.00 0.00 4.63
4566 5177 2.096218 GCGACATCTTCCAACAGTTCAC 60.096 50.000 0.00 0.00 0.00 3.18
4576 5187 5.504665 CCACAAATCATAAGCGACATCTTCC 60.505 44.000 0.00 0.00 0.00 3.46
4594 5205 5.047306 CGCCCTGATAGACTATATCCACAAA 60.047 44.000 0.00 0.00 0.00 2.83
4658 5270 7.878036 TCCCAAACATGTTAAAAGCTACTTAC 58.122 34.615 12.39 0.00 0.00 2.34
4659 5271 7.175990 CCTCCCAAACATGTTAAAAGCTACTTA 59.824 37.037 12.39 0.00 0.00 2.24
4705 5320 3.370366 GTCAGCTGCACACTATCAAGAAG 59.630 47.826 9.47 0.00 0.00 2.85
4732 5365 3.253188 ACAAATCACAAGGACAACATCGG 59.747 43.478 0.00 0.00 0.00 4.18
4742 5375 2.426738 ACACACCACACAAATCACAAGG 59.573 45.455 0.00 0.00 0.00 3.61
4749 5389 3.573538 ACATATGCACACACCACACAAAT 59.426 39.130 1.58 0.00 0.00 2.32
4750 5390 2.954989 ACATATGCACACACCACACAAA 59.045 40.909 1.58 0.00 0.00 2.83
4829 5469 4.752101 GCTAGCTCTCAACTTCACTGAAAA 59.248 41.667 7.70 0.00 0.00 2.29
4853 5493 3.253188 GGTGTTGATTATGTGCACACTGT 59.747 43.478 24.37 9.45 0.00 3.55
4880 5525 9.270707 TGACTGGAATGGATGATATATGATGTA 57.729 33.333 0.00 0.00 0.00 2.29
4881 5526 8.154420 TGACTGGAATGGATGATATATGATGT 57.846 34.615 0.00 0.00 0.00 3.06
4882 5527 9.057089 CATGACTGGAATGGATGATATATGATG 57.943 37.037 0.00 0.00 0.00 3.07
4883 5528 7.720074 GCATGACTGGAATGGATGATATATGAT 59.280 37.037 0.00 0.00 0.00 2.45
4884 5529 7.052248 GCATGACTGGAATGGATGATATATGA 58.948 38.462 0.00 0.00 0.00 2.15
4908 5553 6.318648 TGAATCAGTTCTGTTATGTTATGGGC 59.681 38.462 0.00 0.00 35.33 5.36
4937 5582 8.802267 CCCACTGAATTTCCTTTACTTTTCATA 58.198 33.333 0.00 0.00 0.00 2.15
4939 5584 6.462347 GCCCACTGAATTTCCTTTACTTTTCA 60.462 38.462 0.00 0.00 0.00 2.69
4940 5585 5.926542 GCCCACTGAATTTCCTTTACTTTTC 59.073 40.000 0.00 0.00 0.00 2.29
4942 5587 4.898861 TGCCCACTGAATTTCCTTTACTTT 59.101 37.500 0.00 0.00 0.00 2.66
4943 5588 4.479158 TGCCCACTGAATTTCCTTTACTT 58.521 39.130 0.00 0.00 0.00 2.24
4944 5589 4.112634 TGCCCACTGAATTTCCTTTACT 57.887 40.909 0.00 0.00 0.00 2.24
4946 5591 5.541868 TGATTTGCCCACTGAATTTCCTTTA 59.458 36.000 0.00 0.00 0.00 1.85
4947 5592 4.347583 TGATTTGCCCACTGAATTTCCTTT 59.652 37.500 0.00 0.00 0.00 3.11
4948 5593 3.903090 TGATTTGCCCACTGAATTTCCTT 59.097 39.130 0.00 0.00 0.00 3.36
4949 5594 3.509442 TGATTTGCCCACTGAATTTCCT 58.491 40.909 0.00 0.00 0.00 3.36
4950 5595 3.959535 TGATTTGCCCACTGAATTTCC 57.040 42.857 0.00 0.00 0.00 3.13
4951 5596 5.526846 TGTTTTGATTTGCCCACTGAATTTC 59.473 36.000 0.00 0.00 0.00 2.17
4952 5597 5.435291 TGTTTTGATTTGCCCACTGAATTT 58.565 33.333 0.00 0.00 0.00 1.82
4953 5598 5.033589 TGTTTTGATTTGCCCACTGAATT 57.966 34.783 0.00 0.00 0.00 2.17
4954 5599 4.686191 TGTTTTGATTTGCCCACTGAAT 57.314 36.364 0.00 0.00 0.00 2.57
4955 5600 4.478206 TTGTTTTGATTTGCCCACTGAA 57.522 36.364 0.00 0.00 0.00 3.02
4956 5601 4.686191 ATTGTTTTGATTTGCCCACTGA 57.314 36.364 0.00 0.00 0.00 3.41
4957 5602 6.259608 TGTTTATTGTTTTGATTTGCCCACTG 59.740 34.615 0.00 0.00 0.00 3.66
4958 5603 6.352516 TGTTTATTGTTTTGATTTGCCCACT 58.647 32.000 0.00 0.00 0.00 4.00
4959 5604 6.610741 TGTTTATTGTTTTGATTTGCCCAC 57.389 33.333 0.00 0.00 0.00 4.61
4960 5605 6.994496 TGATGTTTATTGTTTTGATTTGCCCA 59.006 30.769 0.00 0.00 0.00 5.36
4961 5606 7.432350 TGATGTTTATTGTTTTGATTTGCCC 57.568 32.000 0.00 0.00 0.00 5.36
4971 5616 9.295825 TGTCCTGTTCTATGATGTTTATTGTTT 57.704 29.630 0.00 0.00 0.00 2.83
4976 5621 7.624549 AGTGTGTCCTGTTCTATGATGTTTAT 58.375 34.615 0.00 0.00 0.00 1.40
4984 5630 2.744202 GCCAAGTGTGTCCTGTTCTATG 59.256 50.000 0.00 0.00 0.00 2.23
4998 5644 4.509600 GCTAGCTAAGTTATCTGCCAAGTG 59.490 45.833 7.70 0.00 0.00 3.16
5004 5650 6.127591 TGCCTATAGCTAGCTAAGTTATCTGC 60.128 42.308 27.47 19.31 44.23 4.26
5017 5663 9.743057 CTACTGCTTAATTATGCCTATAGCTAG 57.257 37.037 17.85 9.96 44.23 3.42
5023 5669 7.560796 ACTCCTACTGCTTAATTATGCCTAT 57.439 36.000 17.85 8.09 0.00 2.57
5041 5687 5.074102 TGATCCTTAATCCGACCTACTCCTA 59.926 44.000 0.00 0.00 33.01 2.94
5047 5693 2.897969 GCCTGATCCTTAATCCGACCTA 59.102 50.000 0.00 0.00 33.01 3.08
5051 5699 2.972021 TGATGCCTGATCCTTAATCCGA 59.028 45.455 0.00 0.00 33.01 4.55
5067 5715 1.425412 CTTGCTTGCTTGGTTGATGC 58.575 50.000 0.00 0.00 0.00 3.91
5070 5718 1.100463 TCGCTTGCTTGCTTGGTTGA 61.100 50.000 0.00 0.00 0.00 3.18
5078 5726 2.684843 CCTGGACTCGCTTGCTTGC 61.685 63.158 0.00 0.00 0.00 4.01
5082 5730 2.731691 TTCCACCTGGACTCGCTTGC 62.732 60.000 0.00 0.00 45.39 4.01
5089 6034 2.743718 CGCAGTTCCACCTGGACT 59.256 61.111 0.00 0.00 45.39 3.85
5116 6061 1.134936 GGACGAAGAAGAGGAAGAGGC 60.135 57.143 0.00 0.00 0.00 4.70
5121 6066 4.589374 AGAAAAGAGGACGAAGAAGAGGAA 59.411 41.667 0.00 0.00 0.00 3.36
5124 6069 4.490743 GGAGAAAAGAGGACGAAGAAGAG 58.509 47.826 0.00 0.00 0.00 2.85
5193 6141 0.387112 GCGAGCTCATCATCCGAGAG 60.387 60.000 15.40 0.00 31.84 3.20
5194 6142 0.821301 AGCGAGCTCATCATCCGAGA 60.821 55.000 15.40 0.00 31.84 4.04
5204 6152 2.556459 GCGAGGGATAGCGAGCTCA 61.556 63.158 15.40 0.00 0.00 4.26
5229 6188 2.936032 AAAGGAAGGGGAGCGGCT 60.936 61.111 0.00 0.00 0.00 5.52
5237 6196 5.112686 CGTATTTCTCAGAGAAAGGAAGGG 58.887 45.833 26.08 11.43 46.15 3.95
5240 6199 4.504858 GCCGTATTTCTCAGAGAAAGGAA 58.495 43.478 26.08 14.14 46.15 3.36
5242 6201 3.198872 GGCCGTATTTCTCAGAGAAAGG 58.801 50.000 26.08 22.32 46.15 3.11
5268 6229 0.696501 TTTCTGACCTAGGGTTGGCC 59.303 55.000 14.81 0.00 35.25 5.36
5269 6230 2.437413 CTTTTCTGACCTAGGGTTGGC 58.563 52.381 14.81 0.00 35.25 4.52
5270 6231 2.437413 GCTTTTCTGACCTAGGGTTGG 58.563 52.381 14.81 0.29 35.25 3.77
5271 6232 2.437413 GGCTTTTCTGACCTAGGGTTG 58.563 52.381 14.81 2.18 35.25 3.77
5272 6233 1.354705 GGGCTTTTCTGACCTAGGGTT 59.645 52.381 14.81 0.00 35.25 4.11
5273 6234 0.992695 GGGCTTTTCTGACCTAGGGT 59.007 55.000 14.81 0.00 39.44 4.34
5274 6235 0.107654 CGGGCTTTTCTGACCTAGGG 60.108 60.000 14.81 0.00 31.45 3.53
5275 6236 0.613777 ACGGGCTTTTCTGACCTAGG 59.386 55.000 7.41 7.41 31.45 3.02
5276 6237 2.474410 AACGGGCTTTTCTGACCTAG 57.526 50.000 0.00 0.00 31.45 3.02
5277 6238 2.500229 CAAACGGGCTTTTCTGACCTA 58.500 47.619 0.00 0.00 31.45 3.08
5278 6239 1.318576 CAAACGGGCTTTTCTGACCT 58.681 50.000 0.00 0.00 31.45 3.85
5279 6240 0.318699 GCAAACGGGCTTTTCTGACC 60.319 55.000 0.00 0.00 0.00 4.02
5280 6241 0.383949 TGCAAACGGGCTTTTCTGAC 59.616 50.000 0.00 0.00 34.04 3.51
5281 6242 0.383949 GTGCAAACGGGCTTTTCTGA 59.616 50.000 0.00 0.00 34.04 3.27
5282 6243 0.102120 TGTGCAAACGGGCTTTTCTG 59.898 50.000 0.00 0.00 34.04 3.02
5283 6244 0.102300 GTGTGCAAACGGGCTTTTCT 59.898 50.000 0.00 0.00 34.04 2.52
5284 6245 0.874175 GGTGTGCAAACGGGCTTTTC 60.874 55.000 0.00 0.00 34.04 2.29
5285 6246 1.142965 GGTGTGCAAACGGGCTTTT 59.857 52.632 0.00 0.00 34.04 2.27
5286 6247 2.811799 GGTGTGCAAACGGGCTTT 59.188 55.556 0.00 0.00 34.04 3.51
5287 6248 3.591835 CGGTGTGCAAACGGGCTT 61.592 61.111 6.69 0.00 34.04 4.35
5298 6259 1.926511 GAATTGAGCCCAGCGGTGTG 61.927 60.000 14.40 2.69 0.00 3.82
5299 6260 1.675641 GAATTGAGCCCAGCGGTGT 60.676 57.895 14.40 0.00 0.00 4.16
5300 6261 2.409870 GGAATTGAGCCCAGCGGTG 61.410 63.158 7.86 7.86 0.00 4.94
5301 6262 2.044946 GGAATTGAGCCCAGCGGT 60.045 61.111 0.00 0.00 0.00 5.68
5302 6263 2.045045 TGGAATTGAGCCCAGCGG 60.045 61.111 0.00 0.00 0.00 5.52
5303 6264 2.753966 CGTGGAATTGAGCCCAGCG 61.754 63.158 0.00 0.00 32.28 5.18
5304 6265 1.648467 GACGTGGAATTGAGCCCAGC 61.648 60.000 0.00 0.00 32.28 4.85
5305 6266 1.026718 GGACGTGGAATTGAGCCCAG 61.027 60.000 0.00 0.00 32.28 4.45
5306 6267 1.002624 GGACGTGGAATTGAGCCCA 60.003 57.895 0.00 0.00 0.00 5.36
5307 6268 1.749258 GGGACGTGGAATTGAGCCC 60.749 63.158 0.00 0.00 0.00 5.19
5308 6269 0.744771 GAGGGACGTGGAATTGAGCC 60.745 60.000 0.00 0.00 0.00 4.70
5309 6270 1.084370 CGAGGGACGTGGAATTGAGC 61.084 60.000 0.00 0.00 37.22 4.26
5310 6271 3.050703 CGAGGGACGTGGAATTGAG 57.949 57.895 0.00 0.00 37.22 3.02
5321 6282 1.606903 ACCGAGATCATACGAGGGAC 58.393 55.000 0.00 0.00 0.00 4.46
5322 6283 1.954382 CAACCGAGATCATACGAGGGA 59.046 52.381 0.00 0.00 0.00 4.20
5323 6284 1.000163 CCAACCGAGATCATACGAGGG 60.000 57.143 0.00 0.00 0.00 4.30
5324 6285 1.000163 CCCAACCGAGATCATACGAGG 60.000 57.143 0.00 1.74 0.00 4.63
5325 6286 1.603172 GCCCAACCGAGATCATACGAG 60.603 57.143 0.00 0.00 0.00 4.18
5326 6287 0.387929 GCCCAACCGAGATCATACGA 59.612 55.000 0.00 0.00 0.00 3.43
5327 6288 0.600255 GGCCCAACCGAGATCATACG 60.600 60.000 0.00 0.00 0.00 3.06
5328 6289 0.250338 GGGCCCAACCGAGATCATAC 60.250 60.000 19.95 0.00 40.62 2.39
5329 6290 0.692756 TGGGCCCAACCGAGATCATA 60.693 55.000 26.33 0.00 40.62 2.15
5330 6291 1.570857 TTGGGCCCAACCGAGATCAT 61.571 55.000 34.07 0.00 40.62 2.45
5331 6292 2.227757 TTGGGCCCAACCGAGATCA 61.228 57.895 34.07 8.23 40.62 2.92
5332 6293 2.674754 TTGGGCCCAACCGAGATC 59.325 61.111 34.07 0.00 40.62 2.75
5341 6302 0.252012 CCTGTAATTGGTTGGGCCCA 60.252 55.000 24.45 24.45 36.04 5.36
5342 6303 1.613317 GCCTGTAATTGGTTGGGCCC 61.613 60.000 17.59 17.59 36.04 5.80
5343 6304 0.614697 AGCCTGTAATTGGTTGGGCC 60.615 55.000 0.00 0.00 40.32 5.80
5344 6305 0.532115 CAGCCTGTAATTGGTTGGGC 59.468 55.000 0.00 0.00 39.82 5.36
5349 6310 1.427368 TCCAACCAGCCTGTAATTGGT 59.573 47.619 15.37 0.00 46.78 3.67
5350 6311 1.818674 GTCCAACCAGCCTGTAATTGG 59.181 52.381 11.51 11.51 41.04 3.16
5351 6312 2.795329 AGTCCAACCAGCCTGTAATTG 58.205 47.619 0.00 0.00 0.00 2.32
5352 6313 3.587506 AGTAGTCCAACCAGCCTGTAATT 59.412 43.478 0.00 0.00 0.00 1.40
5353 6314 3.182152 AGTAGTCCAACCAGCCTGTAAT 58.818 45.455 0.00 0.00 0.00 1.89
5354 6315 2.616524 AGTAGTCCAACCAGCCTGTAA 58.383 47.619 0.00 0.00 0.00 2.41
5355 6316 2.320681 AGTAGTCCAACCAGCCTGTA 57.679 50.000 0.00 0.00 0.00 2.74
5356 6317 1.435256 AAGTAGTCCAACCAGCCTGT 58.565 50.000 0.00 0.00 0.00 4.00
5357 6318 2.568623 AAAGTAGTCCAACCAGCCTG 57.431 50.000 0.00 0.00 0.00 4.85
5358 6319 4.717279 TTAAAAGTAGTCCAACCAGCCT 57.283 40.909 0.00 0.00 0.00 4.58
5359 6320 5.777850 TTTTAAAAGTAGTCCAACCAGCC 57.222 39.130 0.00 0.00 0.00 4.85
5360 6321 6.566141 TGTTTTTAAAAGTAGTCCAACCAGC 58.434 36.000 0.14 0.00 0.00 4.85
5361 6322 8.989653 TTTGTTTTTAAAAGTAGTCCAACCAG 57.010 30.769 0.14 0.00 0.00 4.00
5362 6323 9.774413 TTTTTGTTTTTAAAAGTAGTCCAACCA 57.226 25.926 0.14 0.00 31.80 3.67
5437 6398 9.289782 GGCACTAGATAACATTTCCAGAAATAT 57.710 33.333 5.34 1.57 38.84 1.28
5438 6399 7.719633 GGGCACTAGATAACATTTCCAGAAATA 59.280 37.037 5.34 0.00 38.84 1.40
5439 6400 6.547510 GGGCACTAGATAACATTTCCAGAAAT 59.452 38.462 0.00 0.00 41.33 2.17
5440 6401 5.885912 GGGCACTAGATAACATTTCCAGAAA 59.114 40.000 0.00 0.00 34.46 2.52
5441 6402 5.437060 GGGCACTAGATAACATTTCCAGAA 58.563 41.667 0.00 0.00 0.00 3.02
5442 6403 4.442893 CGGGCACTAGATAACATTTCCAGA 60.443 45.833 0.00 0.00 0.00 3.86
5443 6404 3.809832 CGGGCACTAGATAACATTTCCAG 59.190 47.826 0.00 0.00 0.00 3.86
5444 6405 3.199071 ACGGGCACTAGATAACATTTCCA 59.801 43.478 0.00 0.00 0.00 3.53
5445 6406 3.805207 ACGGGCACTAGATAACATTTCC 58.195 45.455 0.00 0.00 0.00 3.13
5446 6407 6.200475 GTCTAACGGGCACTAGATAACATTTC 59.800 42.308 0.00 0.00 0.00 2.17
5447 6408 6.047231 GTCTAACGGGCACTAGATAACATTT 58.953 40.000 0.00 0.00 0.00 2.32
5448 6409 5.363005 AGTCTAACGGGCACTAGATAACATT 59.637 40.000 0.00 0.00 0.00 2.71
5449 6410 4.894114 AGTCTAACGGGCACTAGATAACAT 59.106 41.667 0.00 0.00 0.00 2.71
5450 6411 4.275810 AGTCTAACGGGCACTAGATAACA 58.724 43.478 0.00 0.00 0.00 2.41
5451 6412 4.915158 AGTCTAACGGGCACTAGATAAC 57.085 45.455 0.00 0.00 0.00 1.89
5452 6413 5.927281 AAAGTCTAACGGGCACTAGATAA 57.073 39.130 0.00 0.00 0.00 1.75
5453 6414 5.927281 AAAAGTCTAACGGGCACTAGATA 57.073 39.130 0.00 0.00 0.00 1.98
5454 6415 4.820894 AAAAGTCTAACGGGCACTAGAT 57.179 40.909 0.00 0.00 0.00 1.98
5455 6416 4.159135 CCTAAAAGTCTAACGGGCACTAGA 59.841 45.833 0.00 0.00 0.00 2.43
5456 6417 4.430908 CCTAAAAGTCTAACGGGCACTAG 58.569 47.826 0.00 0.00 0.00 2.57
5457 6418 3.368739 GCCTAAAAGTCTAACGGGCACTA 60.369 47.826 0.00 0.00 38.16 2.74
5458 6419 2.614734 GCCTAAAAGTCTAACGGGCACT 60.615 50.000 0.00 0.00 38.16 4.40
5459 6420 1.736126 GCCTAAAAGTCTAACGGGCAC 59.264 52.381 0.00 0.00 38.16 5.01
5460 6421 1.626825 AGCCTAAAAGTCTAACGGGCA 59.373 47.619 0.00 0.00 40.40 5.36
5461 6422 2.007608 CAGCCTAAAAGTCTAACGGGC 58.992 52.381 0.00 0.00 38.50 6.13
5462 6423 3.329929 ACAGCCTAAAAGTCTAACGGG 57.670 47.619 0.00 0.00 0.00 5.28
5463 6424 3.683340 GGAACAGCCTAAAAGTCTAACGG 59.317 47.826 0.00 0.00 0.00 4.44
5464 6425 4.312443 TGGAACAGCCTAAAAGTCTAACG 58.688 43.478 0.00 0.00 37.63 3.18
5482 6443 2.941210 GGGAATGTGTTCGCTGGAA 58.059 52.632 0.00 0.00 42.29 3.53
5483 6444 4.713946 GGGAATGTGTTCGCTGGA 57.286 55.556 0.00 0.00 42.29 3.86
5487 6448 1.237285 ACAGCAGGGAATGTGTTCGC 61.237 55.000 0.00 0.00 44.96 4.70
5488 6449 1.069022 CAACAGCAGGGAATGTGTTCG 60.069 52.381 0.00 0.00 33.61 3.95
5489 6450 1.336240 GCAACAGCAGGGAATGTGTTC 60.336 52.381 0.00 0.00 33.61 3.18
5490 6451 0.675633 GCAACAGCAGGGAATGTGTT 59.324 50.000 0.00 0.00 35.13 3.32
5491 6452 0.467844 TGCAACAGCAGGGAATGTGT 60.468 50.000 0.00 0.00 33.59 3.72
5492 6453 0.038892 GTGCAACAGCAGGGAATGTG 60.039 55.000 0.00 0.00 39.30 3.21
5493 6454 1.518056 CGTGCAACAGCAGGGAATGT 61.518 55.000 0.00 0.00 39.30 2.71
5494 6455 1.210931 CGTGCAACAGCAGGGAATG 59.789 57.895 0.00 0.00 39.30 2.67
5495 6456 0.537143 TTCGTGCAACAGCAGGGAAT 60.537 50.000 9.84 0.00 42.66 3.01
5496 6457 0.537143 ATTCGTGCAACAGCAGGGAA 60.537 50.000 9.84 7.99 42.66 3.97
5497 6458 0.955428 GATTCGTGCAACAGCAGGGA 60.955 55.000 9.84 2.14 42.66 4.20
5498 6459 0.957395 AGATTCGTGCAACAGCAGGG 60.957 55.000 9.84 0.00 42.66 4.45
5499 6460 0.877071 AAGATTCGTGCAACAGCAGG 59.123 50.000 3.97 3.97 43.50 4.85
5500 6461 1.532437 TCAAGATTCGTGCAACAGCAG 59.468 47.619 0.00 0.00 39.30 4.24
5501 6462 1.592064 TCAAGATTCGTGCAACAGCA 58.408 45.000 0.00 0.00 35.74 4.41
5502 6463 2.512885 CATCAAGATTCGTGCAACAGC 58.487 47.619 0.00 0.00 35.74 4.40
5503 6464 2.095617 TGCATCAAGATTCGTGCAACAG 60.096 45.455 0.00 0.00 43.83 3.16
5504 6465 1.878734 TGCATCAAGATTCGTGCAACA 59.121 42.857 0.00 0.00 43.83 3.33
5505 6466 2.617250 TGCATCAAGATTCGTGCAAC 57.383 45.000 0.00 0.00 43.83 4.17
5507 6468 2.351641 GGTTTGCATCAAGATTCGTGCA 60.352 45.455 0.00 0.00 44.97 4.57
5508 6469 2.253603 GGTTTGCATCAAGATTCGTGC 58.746 47.619 0.00 0.00 38.05 5.34
5509 6470 3.557577 TGGTTTGCATCAAGATTCGTG 57.442 42.857 0.00 0.00 0.00 4.35
5510 6471 3.507233 ACATGGTTTGCATCAAGATTCGT 59.493 39.130 0.00 0.00 0.00 3.85
5511 6472 3.855379 CACATGGTTTGCATCAAGATTCG 59.145 43.478 0.00 0.00 0.00 3.34
5512 6473 4.813027 ACACATGGTTTGCATCAAGATTC 58.187 39.130 0.00 0.00 0.00 2.52
5513 6474 4.281435 TGACACATGGTTTGCATCAAGATT 59.719 37.500 0.00 0.00 0.00 2.40
5514 6475 3.827876 TGACACATGGTTTGCATCAAGAT 59.172 39.130 0.00 0.00 0.00 2.40
5515 6476 3.220940 TGACACATGGTTTGCATCAAGA 58.779 40.909 0.00 0.00 0.00 3.02
5516 6477 3.571571 CTGACACATGGTTTGCATCAAG 58.428 45.455 0.00 0.00 0.00 3.02
5517 6478 2.296752 CCTGACACATGGTTTGCATCAA 59.703 45.455 0.00 0.00 0.00 2.57
5518 6479 1.887854 CCTGACACATGGTTTGCATCA 59.112 47.619 0.00 0.00 0.00 3.07
5519 6480 1.888512 ACCTGACACATGGTTTGCATC 59.111 47.619 0.00 0.00 31.62 3.91
5520 6481 1.888512 GACCTGACACATGGTTTGCAT 59.111 47.619 0.00 0.00 36.59 3.96
5521 6482 1.317613 GACCTGACACATGGTTTGCA 58.682 50.000 0.00 0.00 36.59 4.08
5522 6483 1.267806 CTGACCTGACACATGGTTTGC 59.732 52.381 0.00 0.00 36.59 3.68
5523 6484 1.267806 GCTGACCTGACACATGGTTTG 59.732 52.381 0.00 0.00 36.59 2.93
5524 6485 1.143684 AGCTGACCTGACACATGGTTT 59.856 47.619 0.00 0.00 36.59 3.27
5525 6486 0.767375 AGCTGACCTGACACATGGTT 59.233 50.000 0.00 0.00 36.59 3.67
5526 6487 0.322975 GAGCTGACCTGACACATGGT 59.677 55.000 0.00 0.00 39.60 3.55
5527 6488 0.612229 AGAGCTGACCTGACACATGG 59.388 55.000 0.00 0.00 0.00 3.66
5528 6489 1.549620 AGAGAGCTGACCTGACACATG 59.450 52.381 0.00 0.00 0.00 3.21
5529 6490 1.549620 CAGAGAGCTGACCTGACACAT 59.450 52.381 0.00 0.00 45.17 3.21
5530 6491 0.964700 CAGAGAGCTGACCTGACACA 59.035 55.000 0.00 0.00 45.17 3.72
5531 6492 0.246086 CCAGAGAGCTGACCTGACAC 59.754 60.000 0.00 0.00 45.17 3.67
5532 6493 1.539560 GCCAGAGAGCTGACCTGACA 61.540 60.000 0.00 0.00 45.17 3.58
5533 6494 1.217779 GCCAGAGAGCTGACCTGAC 59.782 63.158 0.00 0.00 45.17 3.51
5534 6495 2.346541 CGCCAGAGAGCTGACCTGA 61.347 63.158 0.00 0.00 45.17 3.86
5535 6496 2.183811 CGCCAGAGAGCTGACCTG 59.816 66.667 0.00 0.00 45.17 4.00
5536 6497 2.283532 ACGCCAGAGAGCTGACCT 60.284 61.111 0.00 0.00 45.17 3.85
5537 6498 2.183046 GACGCCAGAGAGCTGACC 59.817 66.667 0.00 0.00 45.17 4.02
5538 6499 2.202544 CGACGCCAGAGAGCTGAC 60.203 66.667 0.00 0.00 45.17 3.51
5539 6500 2.201436 GAACGACGCCAGAGAGCTGA 62.201 60.000 0.00 0.00 45.17 4.26
5540 6501 1.803519 GAACGACGCCAGAGAGCTG 60.804 63.158 0.00 0.00 41.93 4.24
5541 6502 2.569134 GAACGACGCCAGAGAGCT 59.431 61.111 0.00 0.00 0.00 4.09
5542 6503 2.876645 CGAACGACGCCAGAGAGC 60.877 66.667 0.00 0.00 34.51 4.09
5551 6512 0.311165 ATCTGGGATAGCGAACGACG 59.689 55.000 0.00 0.00 45.66 5.12
5552 6513 3.851976 ATATCTGGGATAGCGAACGAC 57.148 47.619 0.00 0.00 0.00 4.34
5553 6514 4.395231 CAGTATATCTGGGATAGCGAACGA 59.605 45.833 0.00 0.00 40.23 3.85
5554 6515 4.663166 CAGTATATCTGGGATAGCGAACG 58.337 47.826 0.00 0.00 40.23 3.95
5566 6527 2.795175 ACCGTTCGCCAGTATATCTG 57.205 50.000 0.00 0.00 43.27 2.90
5567 6528 2.035576 GGAACCGTTCGCCAGTATATCT 59.964 50.000 5.19 0.00 0.00 1.98
5568 6529 2.035576 AGGAACCGTTCGCCAGTATATC 59.964 50.000 5.19 0.00 0.00 1.63
5569 6530 2.037144 AGGAACCGTTCGCCAGTATAT 58.963 47.619 5.19 0.00 0.00 0.86
5570 6531 1.477553 AGGAACCGTTCGCCAGTATA 58.522 50.000 5.19 0.00 0.00 1.47
5571 6532 1.407979 CTAGGAACCGTTCGCCAGTAT 59.592 52.381 5.19 0.00 0.00 2.12
5572 6533 0.813184 CTAGGAACCGTTCGCCAGTA 59.187 55.000 5.19 0.00 0.00 2.74
5573 6534 1.590147 CTAGGAACCGTTCGCCAGT 59.410 57.895 5.19 0.00 0.00 4.00
5574 6535 1.153628 CCTAGGAACCGTTCGCCAG 60.154 63.158 1.05 2.55 0.00 4.85
5575 6536 2.652095 CCCTAGGAACCGTTCGCCA 61.652 63.158 11.48 0.00 0.00 5.69
5576 6537 1.891722 TTCCCTAGGAACCGTTCGCC 61.892 60.000 11.48 0.00 36.71 5.54
5577 6538 0.177373 ATTCCCTAGGAACCGTTCGC 59.823 55.000 11.48 0.00 45.07 4.70
5578 6539 2.954318 TCTATTCCCTAGGAACCGTTCG 59.046 50.000 11.48 0.00 45.07 3.95
5579 6540 4.405036 AGTTCTATTCCCTAGGAACCGTTC 59.595 45.833 11.48 2.37 45.07 3.95
5580 6541 4.359996 AGTTCTATTCCCTAGGAACCGTT 58.640 43.478 11.48 0.00 45.07 4.44
5581 6542 3.991683 AGTTCTATTCCCTAGGAACCGT 58.008 45.455 11.48 0.00 45.07 4.83
5582 6543 4.443034 CCAAGTTCTATTCCCTAGGAACCG 60.443 50.000 11.48 0.03 45.07 4.44
5583 6544 4.141459 CCCAAGTTCTATTCCCTAGGAACC 60.141 50.000 11.48 0.00 45.07 3.62
5584 6545 5.037383 CCCAAGTTCTATTCCCTAGGAAC 57.963 47.826 11.48 5.46 45.07 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.