Multiple sequence alignment - TraesCS5A01G529800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G529800 chr5A 100.000 3886 0 0 1 3886 688962059 688965944 0.000000e+00 7177
1 TraesCS5A01G529800 chr5A 96.491 114 4 0 351 464 507966491 507966378 5.130000e-44 189
2 TraesCS5A01G529800 chr4D 89.208 1844 113 39 1503 3277 504316199 504318025 0.000000e+00 2224
3 TraesCS5A01G529800 chr4D 88.081 990 87 19 506 1487 504315131 504316097 0.000000e+00 1146
4 TraesCS5A01G529800 chr4D 82.749 371 40 13 1 352 504314639 504315004 3.770000e-80 309
5 TraesCS5A01G529800 chr4D 85.153 229 29 5 3642 3868 504318353 504318578 3.020000e-56 230
6 TraesCS5A01G529800 chr4B 91.905 1396 69 23 1839 3204 650936538 650937919 0.000000e+00 1912
7 TraesCS5A01G529800 chr4B 83.615 1007 107 26 507 1487 650934805 650935779 0.000000e+00 893
8 TraesCS5A01G529800 chr4B 86.298 416 40 10 1084 1486 631974021 631973610 1.660000e-118 436
9 TraesCS5A01G529800 chr4B 80.914 372 45 5 2 352 650934335 650934701 1.780000e-68 270
10 TraesCS5A01G529800 chr4B 82.741 197 22 10 3663 3852 650938289 650938480 8.640000e-37 165
11 TraesCS5A01G529800 chr2D 86.635 419 36 12 1081 1486 632563513 632563102 2.750000e-121 446
12 TraesCS5A01G529800 chr1B 85.781 429 48 9 1069 1486 554152984 554153410 3.560000e-120 442
13 TraesCS5A01G529800 chr1B 85.851 417 46 9 1081 1486 625436152 625435738 7.710000e-117 431
14 TraesCS5A01G529800 chr1B 100.000 127 0 0 3302 3428 510986092 510985966 6.490000e-58 235
15 TraesCS5A01G529800 chr1B 98.182 110 2 0 348 457 687254052 687253943 3.960000e-45 193
16 TraesCS5A01G529800 chr5B 85.581 430 47 10 1069 1486 521346407 521346833 1.660000e-118 436
17 TraesCS5A01G529800 chr5B 93.396 106 5 2 3779 3884 689883666 689883563 5.200000e-34 156
18 TraesCS5A01G529800 chr5B 93.396 106 2 5 3777 3879 604157996 604158099 6.720000e-33 152
19 TraesCS5A01G529800 chr5B 90.351 114 6 5 3776 3884 689998850 689998963 1.130000e-30 145
20 TraesCS5A01G529800 chr5B 91.509 106 6 2 3779 3884 689887462 689887360 4.050000e-30 143
21 TraesCS5A01G529800 chr7B 85.919 419 42 10 1081 1486 704165068 704165482 7.710000e-117 431
22 TraesCS5A01G529800 chr2B 85.315 429 50 11 1069 1486 695759600 695760026 7.710000e-117 431
23 TraesCS5A01G529800 chr2B 92.810 153 11 0 3278 3430 116848247 116848399 5.050000e-54 222
24 TraesCS5A01G529800 chr6B 99.338 151 1 0 3278 3428 659210664 659210814 1.380000e-69 274
25 TraesCS5A01G529800 chr3A 98.684 152 2 0 3277 3428 568452635 568452786 1.780000e-68 270
26 TraesCS5A01G529800 chr3A 98.131 107 2 0 351 457 648548911 648549017 1.840000e-43 187
27 TraesCS5A01G529800 chr3A 92.913 127 4 4 343 465 571177105 571176980 3.080000e-41 180
28 TraesCS5A01G529800 chr2A 94.872 156 7 1 3274 3429 61820393 61820239 3.880000e-60 243
29 TraesCS5A01G529800 chr2A 96.581 117 3 1 348 463 115096212 115096096 3.960000e-45 193
30 TraesCS5A01G529800 chr3D 92.857 154 11 0 3275 3428 183740776 183740623 1.410000e-54 224
31 TraesCS5A01G529800 chr7A 91.558 154 13 0 3277 3430 376625178 376625331 3.040000e-51 213
32 TraesCS5A01G529800 chr7A 94.828 116 6 0 342 457 619359589 619359704 8.580000e-42 182
33 TraesCS5A01G529800 chr1D 90.728 151 14 0 3278 3428 460733886 460733736 6.580000e-48 202
34 TraesCS5A01G529800 chr7D 96.581 117 3 1 348 464 474273627 474273742 3.960000e-45 193
35 TraesCS5A01G529800 chr7D 96.491 114 4 0 344 457 615266603 615266716 5.130000e-44 189
36 TraesCS5A01G529800 chr6A 88.679 159 12 4 3274 3429 107221432 107221587 5.130000e-44 189
37 TraesCS5A01G529800 chr6D 95.726 117 3 2 347 463 455884010 455884124 1.840000e-43 187
38 TraesCS5A01G529800 chr5D 93.043 115 6 2 3767 3879 490026019 490026133 2.400000e-37 167
39 TraesCS5A01G529800 chr5D 91.379 116 8 2 3769 3884 546684269 546684156 1.450000e-34 158
40 TraesCS5A01G529800 chr4A 91.304 115 8 2 3770 3884 622243455 622243567 5.200000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G529800 chr5A 688962059 688965944 3885 False 7177.00 7177 100.00000 1 3886 1 chr5A.!!$F1 3885
1 TraesCS5A01G529800 chr4D 504314639 504318578 3939 False 977.25 2224 86.29775 1 3868 4 chr4D.!!$F1 3867
2 TraesCS5A01G529800 chr4B 650934335 650938480 4145 False 810.00 1912 84.79375 2 3852 4 chr4B.!!$F1 3850

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
131 132 0.445436 CTCGCCACAGAAGCATGTTC 59.555 55.0 0.00 0.00 0.00 3.18 F
1264 1393 0.030773 CTCAGCTTAGCGCGGACATA 59.969 55.0 8.83 0.00 45.59 2.29 F
1499 1636 0.109781 GAACCATCGCGCAAATGTGT 60.110 50.0 8.75 7.96 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2056 2633 0.108662 GGCTGCACCAAAACTATGGC 60.109 55.0 0.50 0.0 44.75 4.40 R
2674 3266 0.031994 GGATGTTGTTGCCACCACAC 59.968 55.0 0.00 0.0 31.62 3.82 R
3329 3951 0.031857 TGTTTGCAAACCGCTGGATG 59.968 50.0 33.33 2.2 43.06 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.112113 GTCTCTCCGGCACCTCATTA 58.888 55.000 0.00 0.00 0.00 1.90
82 83 1.067142 GGTAGTCAAGCCATCGTGTCA 60.067 52.381 0.00 0.00 0.00 3.58
85 86 0.792640 GTCAAGCCATCGTGTCACAG 59.207 55.000 3.42 0.00 0.00 3.66
119 120 1.362406 GCTTCTGTTAGCCTCGCCAC 61.362 60.000 0.00 0.00 35.06 5.01
131 132 0.445436 CTCGCCACAGAAGCATGTTC 59.555 55.000 0.00 0.00 0.00 3.18
143 144 3.446442 AGCATGTTCACCTCCATTCTT 57.554 42.857 0.00 0.00 0.00 2.52
152 153 2.310052 CACCTCCATTCTTCCTTCCCTT 59.690 50.000 0.00 0.00 0.00 3.95
158 159 3.766051 CCATTCTTCCTTCCCTTCTTTGG 59.234 47.826 0.00 0.00 0.00 3.28
177 178 2.290008 TGGACACAACCGCATCAGTATT 60.290 45.455 0.00 0.00 0.00 1.89
213 214 6.105397 ACTCTTGACCCGTAAATTAACTCA 57.895 37.500 0.00 0.00 0.00 3.41
233 254 4.157120 CCCGCCACTTCTACCCCG 62.157 72.222 0.00 0.00 0.00 5.73
264 285 4.344679 AGAGCAAAACCATCATCAAAACCA 59.655 37.500 0.00 0.00 0.00 3.67
268 289 5.736338 CAAAACCATCATCAAAACCAAACG 58.264 37.500 0.00 0.00 0.00 3.60
271 292 3.634448 ACCATCATCAAAACCAAACGTCA 59.366 39.130 0.00 0.00 0.00 4.35
272 293 3.980775 CCATCATCAAAACCAAACGTCAC 59.019 43.478 0.00 0.00 0.00 3.67
285 306 1.590147 CGTCACCGTTAAGCCCTCT 59.410 57.895 0.00 0.00 0.00 3.69
309 330 2.618241 TCTCTGTTTTGACAATTGCGCT 59.382 40.909 9.73 0.00 0.00 5.92
312 333 1.135915 TGTTTTGACAATTGCGCTGGT 59.864 42.857 9.73 0.57 0.00 4.00
324 345 0.878416 GCGCTGGTCCACAAATAACA 59.122 50.000 0.00 0.00 0.00 2.41
352 374 2.484742 AAGGGACGGTCCACAAATAC 57.515 50.000 27.32 9.15 38.64 1.89
353 375 1.652947 AGGGACGGTCCACAAATACT 58.347 50.000 27.32 11.28 38.64 2.12
354 376 1.553704 AGGGACGGTCCACAAATACTC 59.446 52.381 27.32 7.74 38.64 2.59
355 377 1.406477 GGGACGGTCCACAAATACTCC 60.406 57.143 27.32 3.41 38.64 3.85
356 378 1.406477 GGACGGTCCACAAATACTCCC 60.406 57.143 22.10 0.00 36.28 4.30
357 379 1.553704 GACGGTCCACAAATACTCCCT 59.446 52.381 0.00 0.00 0.00 4.20
358 380 1.553704 ACGGTCCACAAATACTCCCTC 59.446 52.381 0.00 0.00 0.00 4.30
359 381 1.134491 CGGTCCACAAATACTCCCTCC 60.134 57.143 0.00 0.00 0.00 4.30
361 383 1.553704 GTCCACAAATACTCCCTCCGT 59.446 52.381 0.00 0.00 0.00 4.69
362 384 2.027469 GTCCACAAATACTCCCTCCGTT 60.027 50.000 0.00 0.00 0.00 4.44
363 385 2.640826 TCCACAAATACTCCCTCCGTTT 59.359 45.455 0.00 0.00 0.00 3.60
364 386 3.007635 CCACAAATACTCCCTCCGTTTC 58.992 50.000 0.00 0.00 0.00 2.78
365 387 2.671396 CACAAATACTCCCTCCGTTTCG 59.329 50.000 0.00 0.00 0.00 3.46
366 388 2.564062 ACAAATACTCCCTCCGTTTCGA 59.436 45.455 0.00 0.00 0.00 3.71
367 389 3.007182 ACAAATACTCCCTCCGTTTCGAA 59.993 43.478 0.00 0.00 0.00 3.71
368 390 4.189231 CAAATACTCCCTCCGTTTCGAAT 58.811 43.478 0.00 0.00 0.00 3.34
369 391 4.482952 AATACTCCCTCCGTTTCGAATT 57.517 40.909 0.00 0.00 0.00 2.17
370 392 5.603170 AATACTCCCTCCGTTTCGAATTA 57.397 39.130 0.00 0.00 0.00 1.40
371 393 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
372 394 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
373 395 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
374 396 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
375 397 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
376 398 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
377 399 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
378 400 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
379 401 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
380 402 3.395671 CGTTTCGAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 37.19 5.18
381 403 3.153735 GTTTCGAATTACTTGTCGCAGC 58.846 45.455 0.00 0.00 37.19 5.25
382 404 2.363788 TCGAATTACTTGTCGCAGCT 57.636 45.000 0.00 0.00 37.19 4.24
383 405 3.497297 TCGAATTACTTGTCGCAGCTA 57.503 42.857 0.00 0.00 37.19 3.32
384 406 4.041740 TCGAATTACTTGTCGCAGCTAT 57.958 40.909 0.00 0.00 37.19 2.97
385 407 3.796717 TCGAATTACTTGTCGCAGCTATG 59.203 43.478 0.00 0.00 37.19 2.23
386 408 3.060272 CGAATTACTTGTCGCAGCTATGG 60.060 47.826 0.00 0.00 0.00 2.74
387 409 3.819564 ATTACTTGTCGCAGCTATGGA 57.180 42.857 0.00 0.00 0.00 3.41
388 410 3.819564 TTACTTGTCGCAGCTATGGAT 57.180 42.857 0.00 0.00 0.00 3.41
389 411 1.945387 ACTTGTCGCAGCTATGGATG 58.055 50.000 0.00 0.00 0.00 3.51
390 412 1.208052 ACTTGTCGCAGCTATGGATGT 59.792 47.619 0.00 0.00 0.00 3.06
391 413 2.430694 ACTTGTCGCAGCTATGGATGTA 59.569 45.455 0.00 0.00 0.00 2.29
392 414 3.070159 ACTTGTCGCAGCTATGGATGTAT 59.930 43.478 0.00 0.00 0.00 2.29
393 415 3.303881 TGTCGCAGCTATGGATGTATC 57.696 47.619 0.00 0.00 0.00 2.24
394 416 2.893489 TGTCGCAGCTATGGATGTATCT 59.107 45.455 0.00 0.00 0.00 1.98
395 417 4.079253 TGTCGCAGCTATGGATGTATCTA 58.921 43.478 0.00 0.00 0.00 1.98
396 418 4.156739 TGTCGCAGCTATGGATGTATCTAG 59.843 45.833 0.00 0.00 0.00 2.43
397 419 4.396478 GTCGCAGCTATGGATGTATCTAGA 59.604 45.833 0.00 0.00 0.00 2.43
398 420 5.067153 GTCGCAGCTATGGATGTATCTAGAT 59.933 44.000 10.73 10.73 0.00 1.98
399 421 5.067023 TCGCAGCTATGGATGTATCTAGATG 59.933 44.000 15.79 0.00 32.27 2.90
400 422 5.163571 CGCAGCTATGGATGTATCTAGATGT 60.164 44.000 15.79 1.25 31.86 3.06
401 423 6.038714 CGCAGCTATGGATGTATCTAGATGTA 59.961 42.308 15.79 4.44 31.86 2.29
402 424 7.255416 CGCAGCTATGGATGTATCTAGATGTAT 60.255 40.741 15.79 9.11 31.86 2.29
403 425 8.420222 GCAGCTATGGATGTATCTAGATGTATT 58.580 37.037 15.79 0.00 31.86 1.89
429 451 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
430 452 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
431 453 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
432 454 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
433 455 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
434 456 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
435 457 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
436 458 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
437 459 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
438 460 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
439 461 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
440 462 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
441 463 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
442 464 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
443 465 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
444 466 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
445 467 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
446 468 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
447 469 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
448 470 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
449 471 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
450 472 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
451 473 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
452 474 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
453 475 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
454 476 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
455 477 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
456 478 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
457 479 4.533311 AGTAATTTGGAACGGAGGGAGTAA 59.467 41.667 0.00 0.00 0.00 2.24
458 480 2.845363 TTTGGAACGGAGGGAGTAAC 57.155 50.000 0.00 0.00 0.00 2.50
459 481 2.019807 TTGGAACGGAGGGAGTAACT 57.980 50.000 0.00 0.00 0.00 2.24
460 482 2.905415 TGGAACGGAGGGAGTAACTA 57.095 50.000 0.00 0.00 0.00 2.24
461 483 2.450476 TGGAACGGAGGGAGTAACTAC 58.550 52.381 0.00 0.00 0.00 2.73
462 484 2.225091 TGGAACGGAGGGAGTAACTACA 60.225 50.000 0.00 0.00 0.00 2.74
463 485 2.827921 GGAACGGAGGGAGTAACTACAA 59.172 50.000 0.00 0.00 0.00 2.41
464 486 3.259123 GGAACGGAGGGAGTAACTACAAA 59.741 47.826 0.00 0.00 0.00 2.83
465 487 4.492611 GAACGGAGGGAGTAACTACAAAG 58.507 47.826 0.00 0.00 0.00 2.77
466 488 2.233186 ACGGAGGGAGTAACTACAAAGC 59.767 50.000 0.00 0.00 0.00 3.51
469 491 1.066358 AGGGAGTAACTACAAAGCGGC 60.066 52.381 0.00 0.00 0.00 6.53
472 494 3.072211 GGAGTAACTACAAAGCGGCTTT 58.928 45.455 21.63 21.63 33.58 3.51
488 510 0.657368 CTTTGACCGTCGCTTTGCAC 60.657 55.000 0.00 0.00 0.00 4.57
489 511 1.369839 TTTGACCGTCGCTTTGCACA 61.370 50.000 0.00 0.00 0.00 4.57
491 513 1.163420 TGACCGTCGCTTTGCACATT 61.163 50.000 0.00 0.00 0.00 2.71
561 662 5.221541 CCAAATAAACAAACAAGGCCCACTA 60.222 40.000 0.00 0.00 0.00 2.74
570 671 3.606687 ACAAGGCCCACTATTTTCTACG 58.393 45.455 0.00 0.00 0.00 3.51
673 785 2.506472 CCTAGCGAAGAAGCCCCC 59.494 66.667 0.00 0.00 38.01 5.40
674 786 2.066999 CCTAGCGAAGAAGCCCCCT 61.067 63.158 0.00 0.00 38.01 4.79
676 788 2.034048 CTAGCGAAGAAGCCCCCTCC 62.034 65.000 0.00 0.00 38.01 4.30
677 789 2.531483 TAGCGAAGAAGCCCCCTCCT 62.531 60.000 0.00 0.00 38.01 3.69
678 790 2.904131 CGAAGAAGCCCCCTCCTC 59.096 66.667 0.00 0.00 0.00 3.71
679 791 2.736826 CGAAGAAGCCCCCTCCTCC 61.737 68.421 0.00 0.00 0.00 4.30
680 792 1.307430 GAAGAAGCCCCCTCCTCCT 60.307 63.158 0.00 0.00 0.00 3.69
733 845 1.618837 GCTTTCCCTCCCCAAAACTTC 59.381 52.381 0.00 0.00 0.00 3.01
819 941 1.096386 CAGGTACGAGGTCCTCTCCG 61.096 65.000 17.00 7.11 39.30 4.63
831 953 2.066592 TCCTCTCCGTCCATCTCCTAT 58.933 52.381 0.00 0.00 0.00 2.57
833 955 2.080693 CTCTCCGTCCATCTCCTATCG 58.919 57.143 0.00 0.00 0.00 2.92
834 956 1.420514 TCTCCGTCCATCTCCTATCGT 59.579 52.381 0.00 0.00 0.00 3.73
840 962 3.557475 CGTCCATCTCCTATCGTAGTCCT 60.557 52.174 0.00 0.00 0.00 3.85
845 967 1.883275 CTCCTATCGTAGTCCTGCCTG 59.117 57.143 0.00 0.00 0.00 4.85
847 969 1.032794 CTATCGTAGTCCTGCCTGCA 58.967 55.000 0.00 0.00 0.00 4.41
849 971 1.257750 ATCGTAGTCCTGCCTGCACA 61.258 55.000 0.00 0.00 0.00 4.57
850 972 1.446792 CGTAGTCCTGCCTGCACAG 60.447 63.158 0.00 0.00 37.42 3.66
853 975 0.542938 TAGTCCTGCCTGCACAGTCT 60.543 55.000 3.87 4.66 35.83 3.24
856 978 3.117171 CTGCCTGCACAGTCTCGC 61.117 66.667 0.00 0.00 32.78 5.03
915 1037 1.814169 CCTAGGGTTTTCTCGCCGC 60.814 63.158 0.00 0.00 0.00 6.53
931 1055 2.492090 GCGCGGATCTCTCACTGT 59.508 61.111 8.83 0.00 0.00 3.55
1035 1159 2.470821 CCCGTCGATGTAAGAATCCAC 58.529 52.381 3.52 0.00 0.00 4.02
1060 1184 3.046390 CTCTCGCAACTTATTAGAGCCG 58.954 50.000 0.00 0.00 0.00 5.52
1063 1187 1.258982 CGCAACTTATTAGAGCCGCAG 59.741 52.381 0.00 0.00 0.00 5.18
1077 1201 4.534824 GCAGGCCCTCCCATGCAT 62.535 66.667 7.48 0.00 37.55 3.96
1229 1358 1.134220 TGGTTTGGTCGACTTCTTGCT 60.134 47.619 16.46 0.00 0.00 3.91
1233 1362 2.154854 TGGTCGACTTCTTGCTTCTG 57.845 50.000 16.46 0.00 0.00 3.02
1256 1385 3.974912 TGATTCAGATCTCAGCTTAGCG 58.025 45.455 0.00 0.00 33.28 4.26
1257 1386 2.215907 TTCAGATCTCAGCTTAGCGC 57.784 50.000 0.00 0.00 39.57 5.92
1260 1389 1.103987 AGATCTCAGCTTAGCGCGGA 61.104 55.000 8.83 0.00 45.59 5.54
1263 1392 1.227089 CTCAGCTTAGCGCGGACAT 60.227 57.895 8.83 0.00 45.59 3.06
1264 1393 0.030773 CTCAGCTTAGCGCGGACATA 59.969 55.000 8.83 0.00 45.59 2.29
1265 1394 0.673985 TCAGCTTAGCGCGGACATAT 59.326 50.000 8.83 0.00 45.59 1.78
1280 1409 6.527023 CGCGGACATATATTTTCTGTAGTAGG 59.473 42.308 0.00 0.00 0.00 3.18
1296 1430 8.820831 TCTGTAGTAGGAGTAGTACTAACTGTT 58.179 37.037 16.92 0.00 36.40 3.16
1298 1432 9.799106 TGTAGTAGGAGTAGTACTAACTGTTTT 57.201 33.333 16.92 0.00 36.40 2.43
1340 1474 1.062488 AACACCTGCCCTTCTGGAGT 61.062 55.000 0.00 0.00 38.76 3.85
1353 1487 0.668706 CTGGAGTGCTGGTGTTCTCG 60.669 60.000 0.00 0.00 0.00 4.04
1372 1506 1.226660 GTTGTGCGTGCACTTGCTT 60.227 52.632 23.86 0.00 46.30 3.91
1379 1513 1.521006 GCGTGCACTTGCTTAAAAACC 59.479 47.619 16.19 0.00 42.66 3.27
1380 1514 2.803451 CGTGCACTTGCTTAAAAACCA 58.197 42.857 16.19 0.00 42.66 3.67
1382 1516 3.801594 CGTGCACTTGCTTAAAAACCAAT 59.198 39.130 16.19 0.00 42.66 3.16
1383 1517 4.085107 CGTGCACTTGCTTAAAAACCAATC 60.085 41.667 16.19 0.00 42.66 2.67
1384 1518 4.047822 TGCACTTGCTTAAAAACCAATCG 58.952 39.130 2.33 0.00 42.66 3.34
1385 1519 4.202060 TGCACTTGCTTAAAAACCAATCGA 60.202 37.500 2.33 0.00 42.66 3.59
1386 1520 4.148174 GCACTTGCTTAAAAACCAATCGAC 59.852 41.667 0.00 0.00 38.21 4.20
1397 1533 1.026718 CCAATCGACCCAGTTGCCTC 61.027 60.000 0.00 0.00 0.00 4.70
1420 1556 2.168621 CTGTCGTGCAAGCGAACG 59.831 61.111 0.48 0.00 42.82 3.95
1421 1557 3.281751 CTGTCGTGCAAGCGAACGG 62.282 63.158 0.48 0.00 42.82 4.44
1433 1570 0.738762 GCGAACGGTAGTTTCCCTCC 60.739 60.000 0.00 0.00 41.34 4.30
1480 1617 2.159720 TCGCGCAAATGTGTGAGTAATG 60.160 45.455 8.75 0.00 39.76 1.90
1481 1618 2.159720 CGCGCAAATGTGTGAGTAATGA 60.160 45.455 8.75 0.00 37.45 2.57
1487 1624 5.801947 GCAAATGTGTGAGTAATGAACCATC 59.198 40.000 0.00 0.00 0.00 3.51
1489 1626 3.000041 TGTGTGAGTAATGAACCATCGC 59.000 45.455 0.00 0.00 0.00 4.58
1490 1627 2.029244 GTGTGAGTAATGAACCATCGCG 59.971 50.000 0.00 0.00 0.00 5.87
1491 1628 1.004927 GTGAGTAATGAACCATCGCGC 60.005 52.381 0.00 0.00 0.00 6.86
1492 1629 1.286501 GAGTAATGAACCATCGCGCA 58.713 50.000 8.75 0.00 0.00 6.09
1493 1630 1.663643 GAGTAATGAACCATCGCGCAA 59.336 47.619 8.75 0.00 0.00 4.85
1494 1631 2.080693 AGTAATGAACCATCGCGCAAA 58.919 42.857 8.75 0.00 0.00 3.68
1497 1634 0.810648 ATGAACCATCGCGCAAATGT 59.189 45.000 8.75 0.00 0.00 2.71
1498 1635 0.109827 TGAACCATCGCGCAAATGTG 60.110 50.000 8.75 7.35 0.00 3.21
1499 1636 0.109781 GAACCATCGCGCAAATGTGT 60.110 50.000 8.75 7.96 0.00 3.72
1500 1637 0.387112 AACCATCGCGCAAATGTGTG 60.387 50.000 8.75 1.20 38.35 3.82
1507 1731 3.424487 TCGCGCAAATGTGTGATAAATG 58.576 40.909 8.75 0.00 39.76 2.32
1534 1899 6.261603 ACAATCGTGTGATGATGAGCAAATAT 59.738 34.615 0.00 0.00 36.31 1.28
1556 1922 1.981256 TGGTTTCTCTGCACCCTTTC 58.019 50.000 0.00 0.00 31.24 2.62
1562 1928 0.868406 CTCTGCACCCTTTCGTCAAC 59.132 55.000 0.00 0.00 0.00 3.18
1577 1943 2.754472 GTCAACCAATTGCCCTTTGTC 58.246 47.619 0.00 0.00 35.63 3.18
1581 1947 2.114616 ACCAATTGCCCTTTGTCACAA 58.885 42.857 0.00 0.00 0.00 3.33
1583 1949 3.068560 CCAATTGCCCTTTGTCACAATG 58.931 45.455 0.00 0.00 33.23 2.82
1585 1951 3.665745 ATTGCCCTTTGTCACAATGTC 57.334 42.857 0.00 0.00 31.76 3.06
1587 1953 0.387239 GCCCTTTGTCACAATGTCGC 60.387 55.000 0.00 0.00 0.00 5.19
1594 1960 1.621317 TGTCACAATGTCGCCCTCTTA 59.379 47.619 0.00 0.00 0.00 2.10
1611 1977 6.374613 GCCCTCTTAGTACTGCAAAGTTAAAT 59.625 38.462 5.39 0.00 0.00 1.40
1614 1980 6.827641 TCTTAGTACTGCAAAGTTAAATGCG 58.172 36.000 5.39 3.46 45.47 4.73
1615 1981 6.425721 TCTTAGTACTGCAAAGTTAAATGCGT 59.574 34.615 5.39 7.69 45.47 5.24
1616 1982 5.030874 AGTACTGCAAAGTTAAATGCGTC 57.969 39.130 0.00 2.68 45.47 5.19
1620 1986 4.033990 TGCAAAGTTAAATGCGTCAACA 57.966 36.364 6.24 0.00 45.47 3.33
1621 1987 3.794028 TGCAAAGTTAAATGCGTCAACAC 59.206 39.130 6.24 0.00 45.47 3.32
1645 2030 9.472995 CACGTAACATGTTATCACAGATTTTAC 57.527 33.333 20.72 5.52 35.94 2.01
1647 2032 8.120465 CGTAACATGTTATCACAGATTTTACCC 58.880 37.037 20.72 2.22 35.94 3.69
1648 2033 9.174166 GTAACATGTTATCACAGATTTTACCCT 57.826 33.333 20.72 0.00 35.94 4.34
1659 2044 4.460382 CAGATTTTACCCTGCTTGATGTGT 59.540 41.667 0.00 0.00 0.00 3.72
1673 2058 5.220340 GCTTGATGTGTTTATGATTGCAAGC 60.220 40.000 7.99 7.99 45.57 4.01
1682 2067 5.973899 TTATGATTGCAAGCAAACTGGTA 57.026 34.783 22.73 5.37 39.55 3.25
1688 2073 6.541641 TGATTGCAAGCAAACTGGTAATTTTT 59.458 30.769 16.30 0.00 39.55 1.94
1734 2120 3.502123 AGCTAGATCTCTAGGCGACTT 57.498 47.619 14.46 0.00 44.63 3.01
1748 2134 1.570813 CGACTTCACTTGCACTGACA 58.429 50.000 0.00 0.00 0.00 3.58
1749 2135 1.524355 CGACTTCACTTGCACTGACAG 59.476 52.381 0.00 0.00 0.00 3.51
1756 2142 3.004839 TCACTTGCACTGACAGTAGTCTC 59.995 47.826 8.02 0.00 45.20 3.36
1774 2160 3.683822 GTCTCTTTGCAGACTTCCATCAG 59.316 47.826 0.00 0.00 39.91 2.90
1798 2184 3.054728 TGCCTTTGGTAATAGTGCTGCTA 60.055 43.478 0.00 0.00 0.00 3.49
1805 2191 6.785337 TGGTAATAGTGCTGCTACTCTTAA 57.215 37.500 0.00 0.00 31.59 1.85
1835 2221 6.260377 CAAAGTTCAATGCATCATCGTGTAT 58.740 36.000 0.00 0.00 0.00 2.29
1836 2222 7.408910 CAAAGTTCAATGCATCATCGTGTATA 58.591 34.615 0.00 0.00 0.00 1.47
1885 2432 1.986882 CAGCCTTTCCTCAACCAACT 58.013 50.000 0.00 0.00 0.00 3.16
1912 2459 6.399639 TTTGGTAATTGTGTTCCCTTCTTC 57.600 37.500 0.00 0.00 0.00 2.87
2003 2579 6.546972 TGATGTAAACTGCAACAAATACGA 57.453 33.333 0.00 0.00 0.00 3.43
2056 2633 7.436933 TGCACTGACCATAGATGAGTAATTAG 58.563 38.462 0.00 0.00 0.00 1.73
2079 2656 3.578688 CATAGTTTTGGTGCAGCCTTTC 58.421 45.455 14.36 1.91 38.35 2.62
2084 2661 0.537143 TTGGTGCAGCCTTTCGTGAT 60.537 50.000 14.36 0.00 38.35 3.06
2098 2675 5.124776 CCTTTCGTGATATGCCTTTGGTAAA 59.875 40.000 0.00 0.00 0.00 2.01
2099 2676 6.183360 CCTTTCGTGATATGCCTTTGGTAAAT 60.183 38.462 0.00 0.00 0.00 1.40
2100 2677 7.012894 CCTTTCGTGATATGCCTTTGGTAAATA 59.987 37.037 0.00 0.00 0.00 1.40
2115 2692 8.542497 TTTGGTAAATAGTGTAGTACTGCAAG 57.458 34.615 15.68 0.00 40.65 4.01
2141 2718 8.561212 GGTTAAATGCACCATCGTGTATATAAA 58.439 33.333 0.00 0.00 43.61 1.40
2189 2766 1.072806 TGTGCAGCCTCTCATCAGTTT 59.927 47.619 0.00 0.00 0.00 2.66
2195 2772 3.198635 CAGCCTCTCATCAGTTTCCCTTA 59.801 47.826 0.00 0.00 0.00 2.69
2197 2774 4.476479 AGCCTCTCATCAGTTTCCCTTATT 59.524 41.667 0.00 0.00 0.00 1.40
2206 2783 9.154632 TCATCAGTTTCCCTTATTATAGTGCTA 57.845 33.333 0.00 0.00 0.00 3.49
2208 2785 7.732996 TCAGTTTCCCTTATTATAGTGCTACC 58.267 38.462 0.00 0.00 0.00 3.18
2210 2787 7.990886 CAGTTTCCCTTATTATAGTGCTACCAA 59.009 37.037 0.00 0.00 0.00 3.67
2212 2789 6.092955 TCCCTTATTATAGTGCTACCAACG 57.907 41.667 0.00 0.00 0.00 4.10
2221 2798 3.518590 AGTGCTACCAACGTAATACTGC 58.481 45.455 0.00 0.00 0.00 4.40
2281 2858 5.209944 CGATAGTTTCTCTGCACCTTTTC 57.790 43.478 0.00 0.00 0.00 2.29
2294 2871 3.243068 GCACCTTTTCGTCAGTCAATTGT 60.243 43.478 5.13 0.00 0.00 2.71
2317 2894 2.172483 CTGTAACAGTGCCGCCCTCT 62.172 60.000 0.00 0.00 0.00 3.69
2352 2929 5.938322 ACGTTAAATGCATCAAGGTGTAAG 58.062 37.500 14.85 0.00 0.00 2.34
2674 3266 0.539051 GGGAGATGTGGACTGAGGTG 59.461 60.000 0.00 0.00 0.00 4.00
2699 3291 2.649129 GGCAACAACATCCCAGCCC 61.649 63.158 0.00 0.00 36.17 5.19
2731 3323 3.242739 CCGTTTCCTTGTCTTGTCTTGTG 60.243 47.826 0.00 0.00 0.00 3.33
2846 3438 3.197766 TCATAAGCAAGATGTTCCTCCGT 59.802 43.478 0.00 0.00 0.00 4.69
2979 3571 3.099905 TGGATCAGGGAGTGTGTAAGAG 58.900 50.000 0.00 0.00 0.00 2.85
3029 3621 5.321102 ACTGATTAATGGTTTGGTGCTGTA 58.679 37.500 0.00 0.00 0.00 2.74
3097 3690 0.764890 TGCACTGGTAGCCTCTGTTT 59.235 50.000 0.00 0.00 0.00 2.83
3116 3709 6.769341 TCTGTTTGGATCATCAATATGTCTGG 59.231 38.462 0.00 0.00 34.50 3.86
3117 3710 6.425735 TGTTTGGATCATCAATATGTCTGGT 58.574 36.000 0.00 0.00 34.50 4.00
3118 3711 6.543465 TGTTTGGATCATCAATATGTCTGGTC 59.457 38.462 0.00 0.00 34.50 4.02
3119 3712 6.505048 TTGGATCATCAATATGTCTGGTCT 57.495 37.500 0.00 0.00 34.50 3.85
3120 3713 5.861727 TGGATCATCAATATGTCTGGTCTG 58.138 41.667 0.00 0.00 34.50 3.51
3157 3750 6.645700 TCAGTTTCAGAATGTTTTGTTTGC 57.354 33.333 0.00 0.00 37.40 3.68
3164 3757 3.862845 AGAATGTTTTGTTTGCGTTCCAC 59.137 39.130 0.00 0.00 0.00 4.02
3192 3785 1.940613 GTGAATCGGTAGTTGCCCATC 59.059 52.381 0.00 0.00 0.00 3.51
3204 3797 2.251642 GCCCATCCCGTCGTATTGC 61.252 63.158 0.00 0.00 0.00 3.56
3205 3798 1.145156 CCCATCCCGTCGTATTGCA 59.855 57.895 0.00 0.00 0.00 4.08
3277 3899 5.975693 TGGTACCTTTTGGATGTCAAATC 57.024 39.130 14.36 0.00 43.95 2.17
3278 3900 4.457603 TGGTACCTTTTGGATGTCAAATCG 59.542 41.667 14.36 0.00 43.95 3.34
3279 3901 4.698304 GGTACCTTTTGGATGTCAAATCGA 59.302 41.667 4.06 0.00 43.95 3.59
3280 3902 5.182380 GGTACCTTTTGGATGTCAAATCGAA 59.818 40.000 4.06 0.00 43.95 3.71
3281 3903 5.782893 ACCTTTTGGATGTCAAATCGAAA 57.217 34.783 0.00 0.00 43.95 3.46
3282 3904 5.528870 ACCTTTTGGATGTCAAATCGAAAC 58.471 37.500 0.00 0.00 43.95 2.78
3283 3905 5.301805 ACCTTTTGGATGTCAAATCGAAACT 59.698 36.000 0.00 0.00 43.95 2.66
3284 3906 5.630680 CCTTTTGGATGTCAAATCGAAACTG 59.369 40.000 0.00 0.00 43.95 3.16
3285 3907 3.829886 TGGATGTCAAATCGAAACTGC 57.170 42.857 0.00 0.00 0.00 4.40
3286 3908 3.411446 TGGATGTCAAATCGAAACTGCT 58.589 40.909 0.00 0.00 0.00 4.24
3287 3909 3.189080 TGGATGTCAAATCGAAACTGCTG 59.811 43.478 0.00 0.00 0.00 4.41
3288 3910 3.189287 GGATGTCAAATCGAAACTGCTGT 59.811 43.478 0.00 0.00 0.00 4.40
3289 3911 3.607422 TGTCAAATCGAAACTGCTGTG 57.393 42.857 0.00 0.00 0.00 3.66
3290 3912 2.286950 TGTCAAATCGAAACTGCTGTGC 60.287 45.455 0.00 0.00 0.00 4.57
3291 3913 1.946081 TCAAATCGAAACTGCTGTGCA 59.054 42.857 0.00 0.00 36.92 4.57
3292 3914 2.046313 CAAATCGAAACTGCTGTGCAC 58.954 47.619 10.75 10.75 33.79 4.57
3293 3915 1.308047 AATCGAAACTGCTGTGCACA 58.692 45.000 20.37 20.37 33.79 4.57
3294 3916 0.588252 ATCGAAACTGCTGTGCACAC 59.412 50.000 17.42 13.56 33.79 3.82
3295 3917 1.368019 CGAAACTGCTGTGCACACG 60.368 57.895 17.42 12.47 33.79 4.49
3296 3918 1.761244 CGAAACTGCTGTGCACACGA 61.761 55.000 17.42 3.99 33.79 4.35
3297 3919 0.316196 GAAACTGCTGTGCACACGAC 60.316 55.000 17.42 9.14 33.79 4.34
3298 3920 1.024046 AAACTGCTGTGCACACGACA 61.024 50.000 17.42 13.43 33.79 4.35
3299 3921 0.815213 AACTGCTGTGCACACGACAT 60.815 50.000 17.42 0.00 33.79 3.06
3300 3922 0.033366 ACTGCTGTGCACACGACATA 59.967 50.000 17.42 0.00 33.79 2.29
3301 3923 1.338105 ACTGCTGTGCACACGACATAT 60.338 47.619 17.42 3.46 33.79 1.78
3302 3924 2.094234 ACTGCTGTGCACACGACATATA 60.094 45.455 17.42 0.00 33.79 0.86
3303 3925 2.537214 CTGCTGTGCACACGACATATAG 59.463 50.000 17.42 3.83 33.79 1.31
3304 3926 1.860950 GCTGTGCACACGACATATAGG 59.139 52.381 17.42 3.01 0.00 2.57
3305 3927 2.473816 CTGTGCACACGACATATAGGG 58.526 52.381 17.42 0.00 0.00 3.53
3306 3928 1.828595 TGTGCACACGACATATAGGGT 59.171 47.619 17.42 0.00 0.00 4.34
3307 3929 2.201732 GTGCACACGACATATAGGGTG 58.798 52.381 13.17 3.78 36.50 4.61
3308 3930 2.104170 TGCACACGACATATAGGGTGA 58.896 47.619 10.46 0.00 34.59 4.02
3309 3931 2.498078 TGCACACGACATATAGGGTGAA 59.502 45.455 10.46 0.00 34.59 3.18
3310 3932 2.864343 GCACACGACATATAGGGTGAAC 59.136 50.000 10.46 0.00 34.59 3.18
3311 3933 3.113322 CACACGACATATAGGGTGAACG 58.887 50.000 0.00 0.00 34.59 3.95
3312 3934 3.018856 ACACGACATATAGGGTGAACGA 58.981 45.455 0.00 0.00 34.59 3.85
3313 3935 3.181493 ACACGACATATAGGGTGAACGAC 60.181 47.826 0.00 0.00 34.59 4.34
3314 3936 2.360165 ACGACATATAGGGTGAACGACC 59.640 50.000 0.00 0.00 45.28 4.79
3321 3943 3.340789 GGTGAACGACCCTTGCAC 58.659 61.111 0.00 0.00 39.10 4.57
3322 3944 2.604174 GGTGAACGACCCTTGCACG 61.604 63.158 0.00 0.00 39.10 5.34
3323 3945 1.593209 GTGAACGACCCTTGCACGA 60.593 57.895 0.24 0.00 0.00 4.35
3324 3946 0.949105 GTGAACGACCCTTGCACGAT 60.949 55.000 0.24 0.00 0.00 3.73
3325 3947 0.948623 TGAACGACCCTTGCACGATG 60.949 55.000 0.24 0.00 0.00 3.84
3326 3948 1.635663 GAACGACCCTTGCACGATGG 61.636 60.000 0.24 0.00 0.00 3.51
3327 3949 2.047274 CGACCCTTGCACGATGGT 60.047 61.111 0.00 0.00 0.00 3.55
3328 3950 2.100631 CGACCCTTGCACGATGGTC 61.101 63.158 11.32 11.32 43.07 4.02
3329 3951 1.745489 GACCCTTGCACGATGGTCC 60.745 63.158 10.55 0.00 41.14 4.46
3330 3952 2.350895 CCCTTGCACGATGGTCCA 59.649 61.111 0.00 0.00 0.00 4.02
3331 3953 1.077501 CCCTTGCACGATGGTCCAT 60.078 57.895 3.26 3.26 0.00 3.41
3332 3954 1.097547 CCCTTGCACGATGGTCCATC 61.098 60.000 20.45 20.45 37.50 3.51
3333 3955 1.097547 CCTTGCACGATGGTCCATCC 61.098 60.000 23.58 11.99 37.57 3.51
3341 3963 3.166434 TGGTCCATCCAGCGGTTT 58.834 55.556 0.00 0.00 41.93 3.27
3342 3964 1.303236 TGGTCCATCCAGCGGTTTG 60.303 57.895 0.00 0.00 41.93 2.93
3343 3965 2.700773 GGTCCATCCAGCGGTTTGC 61.701 63.158 0.00 0.00 46.98 3.68
3355 3977 2.768222 GCGGTTTGCAAACAACTTTTG 58.232 42.857 35.95 19.77 45.45 2.44
3365 3987 4.344448 CAAACAACTTTTGCTTTGCATGG 58.656 39.130 0.00 0.00 38.76 3.66
3366 3988 3.540314 ACAACTTTTGCTTTGCATGGA 57.460 38.095 0.00 0.00 38.76 3.41
3367 3989 4.075963 ACAACTTTTGCTTTGCATGGAT 57.924 36.364 0.00 0.00 38.76 3.41
3368 3990 3.810941 ACAACTTTTGCTTTGCATGGATG 59.189 39.130 0.00 0.00 38.76 3.51
3369 3991 3.048337 ACTTTTGCTTTGCATGGATGG 57.952 42.857 0.00 0.00 38.76 3.51
3370 3992 1.735571 CTTTTGCTTTGCATGGATGGC 59.264 47.619 0.00 0.00 38.76 4.40
3371 3993 0.978151 TTTGCTTTGCATGGATGGCT 59.022 45.000 11.71 0.00 38.76 4.75
3372 3994 0.978151 TTGCTTTGCATGGATGGCTT 59.022 45.000 11.71 0.00 38.76 4.35
3373 3995 0.248012 TGCTTTGCATGGATGGCTTG 59.752 50.000 11.71 0.00 31.71 4.01
3374 3996 0.533491 GCTTTGCATGGATGGCTTGA 59.467 50.000 0.00 0.00 0.00 3.02
3375 3997 1.066716 GCTTTGCATGGATGGCTTGAA 60.067 47.619 0.00 0.00 0.00 2.69
3376 3998 2.419574 GCTTTGCATGGATGGCTTGAAT 60.420 45.455 0.00 0.00 0.00 2.57
3377 3999 2.971660 TTGCATGGATGGCTTGAATG 57.028 45.000 0.00 0.00 0.00 2.67
3378 4000 1.116308 TGCATGGATGGCTTGAATGG 58.884 50.000 0.00 0.00 0.00 3.16
3379 4001 0.391597 GCATGGATGGCTTGAATGGG 59.608 55.000 0.00 0.00 0.00 4.00
3380 4002 1.784358 CATGGATGGCTTGAATGGGT 58.216 50.000 0.00 0.00 0.00 4.51
3381 4003 2.112998 CATGGATGGCTTGAATGGGTT 58.887 47.619 0.00 0.00 0.00 4.11
3382 4004 1.559368 TGGATGGCTTGAATGGGTTG 58.441 50.000 0.00 0.00 0.00 3.77
3383 4005 1.203162 TGGATGGCTTGAATGGGTTGT 60.203 47.619 0.00 0.00 0.00 3.32
3384 4006 1.478105 GGATGGCTTGAATGGGTTGTC 59.522 52.381 0.00 0.00 0.00 3.18
3385 4007 1.133025 GATGGCTTGAATGGGTTGTCG 59.867 52.381 0.00 0.00 0.00 4.35
3386 4008 0.179004 TGGCTTGAATGGGTTGTCGT 60.179 50.000 0.00 0.00 0.00 4.34
3387 4009 0.958822 GGCTTGAATGGGTTGTCGTT 59.041 50.000 0.00 0.00 0.00 3.85
3388 4010 1.068541 GGCTTGAATGGGTTGTCGTTC 60.069 52.381 0.00 0.00 34.27 3.95
3389 4011 1.606668 GCTTGAATGGGTTGTCGTTCA 59.393 47.619 0.00 0.00 39.89 3.18
3390 4012 2.228822 GCTTGAATGGGTTGTCGTTCAT 59.771 45.455 0.00 0.00 40.85 2.57
3391 4013 3.438781 GCTTGAATGGGTTGTCGTTCATA 59.561 43.478 0.00 0.00 40.85 2.15
3392 4014 4.083003 GCTTGAATGGGTTGTCGTTCATAA 60.083 41.667 0.00 0.00 40.85 1.90
3393 4015 5.563867 GCTTGAATGGGTTGTCGTTCATAAA 60.564 40.000 0.00 0.00 40.85 1.40
3394 4016 6.582677 TTGAATGGGTTGTCGTTCATAAAT 57.417 33.333 0.00 0.00 40.85 1.40
3395 4017 6.189677 TGAATGGGTTGTCGTTCATAAATC 57.810 37.500 0.00 0.00 37.64 2.17
3396 4018 4.875544 ATGGGTTGTCGTTCATAAATCG 57.124 40.909 0.00 0.00 0.00 3.34
3397 4019 3.666274 TGGGTTGTCGTTCATAAATCGT 58.334 40.909 0.00 0.00 0.00 3.73
3398 4020 3.680937 TGGGTTGTCGTTCATAAATCGTC 59.319 43.478 0.00 0.00 0.00 4.20
3399 4021 3.930848 GGGTTGTCGTTCATAAATCGTCT 59.069 43.478 0.00 0.00 0.00 4.18
3400 4022 5.104374 GGGTTGTCGTTCATAAATCGTCTA 58.896 41.667 0.00 0.00 0.00 2.59
3401 4023 5.005107 GGGTTGTCGTTCATAAATCGTCTAC 59.995 44.000 0.00 0.00 0.00 2.59
3402 4024 5.275602 GGTTGTCGTTCATAAATCGTCTACG 60.276 44.000 0.00 0.00 41.45 3.51
3403 4025 4.973396 TGTCGTTCATAAATCGTCTACGT 58.027 39.130 2.02 0.00 40.80 3.57
3404 4026 6.105657 TGTCGTTCATAAATCGTCTACGTA 57.894 37.500 2.02 0.00 40.80 3.57
3405 4027 5.959527 TGTCGTTCATAAATCGTCTACGTAC 59.040 40.000 2.02 0.00 40.80 3.67
3406 4028 6.183360 TGTCGTTCATAAATCGTCTACGTACT 60.183 38.462 2.02 0.00 40.80 2.73
3407 4029 6.138236 GTCGTTCATAAATCGTCTACGTACTG 59.862 42.308 2.02 0.00 40.80 2.74
3408 4030 5.961843 CGTTCATAAATCGTCTACGTACTGT 59.038 40.000 2.02 0.00 40.80 3.55
3409 4031 6.138236 CGTTCATAAATCGTCTACGTACTGTC 59.862 42.308 2.02 0.00 40.80 3.51
3410 4032 5.731278 TCATAAATCGTCTACGTACTGTCG 58.269 41.667 2.02 0.00 40.80 4.35
3411 4033 5.291858 TCATAAATCGTCTACGTACTGTCGT 59.708 40.000 2.02 9.50 45.97 4.34
3412 4034 3.648179 AATCGTCTACGTACTGTCGTC 57.352 47.619 8.20 0.00 43.12 4.20
3413 4035 2.354109 TCGTCTACGTACTGTCGTCT 57.646 50.000 8.20 0.00 43.12 4.18
3414 4036 1.988467 TCGTCTACGTACTGTCGTCTG 59.012 52.381 8.20 4.76 43.12 3.51
3415 4037 1.723542 CGTCTACGTACTGTCGTCTGT 59.276 52.381 8.20 0.00 43.12 3.41
3416 4038 2.917343 CGTCTACGTACTGTCGTCTGTA 59.083 50.000 8.20 0.00 43.12 2.74
3417 4039 3.549471 CGTCTACGTACTGTCGTCTGTAT 59.451 47.826 8.20 0.00 43.12 2.29
3418 4040 4.735338 CGTCTACGTACTGTCGTCTGTATA 59.265 45.833 8.20 0.00 43.12 1.47
3419 4041 5.108443 CGTCTACGTACTGTCGTCTGTATAG 60.108 48.000 8.20 3.01 43.12 1.31
3420 4042 3.940657 ACGTACTGTCGTCTGTATAGC 57.059 47.619 3.10 0.00 40.04 2.97
3421 4043 3.264947 ACGTACTGTCGTCTGTATAGCA 58.735 45.455 3.10 0.00 40.04 3.49
3422 4044 3.309138 ACGTACTGTCGTCTGTATAGCAG 59.691 47.826 3.10 0.00 46.34 4.24
3423 4045 3.309138 CGTACTGTCGTCTGTATAGCAGT 59.691 47.826 3.10 0.00 45.23 4.40
3424 4046 3.766676 ACTGTCGTCTGTATAGCAGTG 57.233 47.619 0.00 0.00 45.23 3.66
3425 4047 2.159366 ACTGTCGTCTGTATAGCAGTGC 60.159 50.000 7.13 7.13 45.23 4.40
3426 4048 2.092323 TGTCGTCTGTATAGCAGTGCT 58.908 47.619 23.44 23.44 45.23 4.40
3427 4049 2.159379 TGTCGTCTGTATAGCAGTGCTG 60.159 50.000 27.97 10.51 45.23 4.41
3428 4050 2.097629 GTCGTCTGTATAGCAGTGCTGA 59.902 50.000 27.97 12.87 45.23 4.26
3429 4051 2.952310 TCGTCTGTATAGCAGTGCTGAT 59.048 45.455 27.97 17.69 45.23 2.90
3430 4052 3.048501 CGTCTGTATAGCAGTGCTGATG 58.951 50.000 27.97 16.31 45.23 3.07
3431 4053 3.489908 CGTCTGTATAGCAGTGCTGATGT 60.490 47.826 27.97 12.80 45.23 3.06
3432 4054 4.047822 GTCTGTATAGCAGTGCTGATGTC 58.952 47.826 27.97 13.03 45.23 3.06
3433 4055 3.701040 TCTGTATAGCAGTGCTGATGTCA 59.299 43.478 27.97 16.44 45.23 3.58
3434 4056 4.160252 TCTGTATAGCAGTGCTGATGTCAA 59.840 41.667 27.97 5.87 45.23 3.18
3435 4057 4.831107 TGTATAGCAGTGCTGATGTCAAA 58.169 39.130 27.97 5.04 40.10 2.69
3436 4058 5.430886 TGTATAGCAGTGCTGATGTCAAAT 58.569 37.500 27.97 12.54 40.10 2.32
3437 4059 6.581712 TGTATAGCAGTGCTGATGTCAAATA 58.418 36.000 27.97 11.51 40.10 1.40
3438 4060 6.703165 TGTATAGCAGTGCTGATGTCAAATAG 59.297 38.462 27.97 0.00 40.10 1.73
3469 4091 6.815142 GCTCCTTTGTTGCAATAGAATTTCAT 59.185 34.615 0.59 0.00 0.00 2.57
3470 4092 7.201496 GCTCCTTTGTTGCAATAGAATTTCATG 60.201 37.037 0.59 0.00 0.00 3.07
3477 4099 8.102047 TGTTGCAATAGAATTTCATGGGATTTT 58.898 29.630 0.59 0.00 0.00 1.82
3507 4129 9.476202 CCTCGGGAATATTTTCAATTTTAATCC 57.524 33.333 0.00 0.00 33.23 3.01
3559 4182 4.643784 GGAGAAGCATTTTCATCCACTCAT 59.356 41.667 0.00 0.00 0.00 2.90
3649 4397 9.734620 TTTTTCTATATGAATCAAAAGATGCCG 57.265 29.630 0.00 0.00 34.24 5.69
3652 4400 8.450578 TCTATATGAATCAAAAGATGCCGTTT 57.549 30.769 0.00 0.00 0.00 3.60
3655 4403 5.309323 TGAATCAAAAGATGCCGTTTAGG 57.691 39.130 0.00 0.00 44.97 2.69
3660 4408 3.418684 AAAGATGCCGTTTAGGTGTCT 57.581 42.857 0.00 0.00 43.70 3.41
3720 4470 2.682856 GTGGCCGAAATAATGAAGCAGA 59.317 45.455 0.00 0.00 0.00 4.26
3733 4483 3.916761 TGAAGCAGAAAATCAATGCACC 58.083 40.909 0.00 0.00 42.45 5.01
3734 4484 3.321396 TGAAGCAGAAAATCAATGCACCA 59.679 39.130 0.00 0.00 42.45 4.17
3735 4485 4.020928 TGAAGCAGAAAATCAATGCACCAT 60.021 37.500 0.00 0.00 42.45 3.55
3736 4486 4.546829 AGCAGAAAATCAATGCACCATT 57.453 36.364 0.00 0.00 42.45 3.16
3737 4487 4.501071 AGCAGAAAATCAATGCACCATTC 58.499 39.130 0.00 0.00 42.45 2.67
3738 4488 4.020928 AGCAGAAAATCAATGCACCATTCA 60.021 37.500 0.00 0.00 42.45 2.57
3739 4489 4.092383 GCAGAAAATCAATGCACCATTCAC 59.908 41.667 0.00 0.00 39.75 3.18
3740 4490 4.628333 CAGAAAATCAATGCACCATTCACC 59.372 41.667 0.00 0.00 31.05 4.02
3741 4491 4.529377 AGAAAATCAATGCACCATTCACCT 59.471 37.500 0.00 0.00 31.05 4.00
3745 4495 7.658525 AAATCAATGCACCATTCACCTTATA 57.341 32.000 0.00 0.00 31.05 0.98
3749 4499 8.565896 TCAATGCACCATTCACCTTATATATC 57.434 34.615 0.00 0.00 31.05 1.63
3750 4500 8.385491 TCAATGCACCATTCACCTTATATATCT 58.615 33.333 0.00 0.00 31.05 1.98
3751 4501 8.456471 CAATGCACCATTCACCTTATATATCTG 58.544 37.037 0.00 0.00 31.05 2.90
3857 4607 1.842381 CGGTTGGGCCCTTCTCTTCT 61.842 60.000 25.70 0.00 0.00 2.85
3860 4610 2.598565 GTTGGGCCCTTCTCTTCTTTT 58.401 47.619 25.70 0.00 0.00 2.27
3862 4612 4.344978 GTTGGGCCCTTCTCTTCTTTTAT 58.655 43.478 25.70 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.112113 TAATGAGGTGCCGGAGAGAC 58.888 55.000 5.05 0.00 0.00 3.36
10 11 3.278574 TGGAGATTTTAATGAGGTGCCG 58.721 45.455 0.00 0.00 0.00 5.69
22 23 4.764823 TCGTGGCTTTGTATTGGAGATTTT 59.235 37.500 0.00 0.00 0.00 1.82
85 86 2.419324 CAGAAGCCTTTGACAGCAGATC 59.581 50.000 0.00 0.00 0.00 2.75
114 115 0.110056 GTGAACATGCTTCTGTGGCG 60.110 55.000 0.00 0.00 0.00 5.69
119 120 2.189594 TGGAGGTGAACATGCTTCTG 57.810 50.000 0.00 0.00 0.00 3.02
131 132 1.918957 AGGGAAGGAAGAATGGAGGTG 59.081 52.381 0.00 0.00 0.00 4.00
143 144 2.131854 TGTGTCCAAAGAAGGGAAGGA 58.868 47.619 0.00 0.00 35.88 3.36
152 153 1.234821 GATGCGGTTGTGTCCAAAGA 58.765 50.000 0.00 0.00 30.94 2.52
158 159 2.742053 ACAATACTGATGCGGTTGTGTC 59.258 45.455 0.00 0.00 32.30 3.67
177 178 6.095720 ACGGGTCAAGAGTTTTTCAAAATACA 59.904 34.615 0.00 0.00 0.00 2.29
213 214 1.632965 GGGGTAGAAGTGGCGGGATT 61.633 60.000 0.00 0.00 0.00 3.01
233 254 2.561478 TGGTTTTGCTCTGGGTAGTC 57.439 50.000 0.00 0.00 0.00 2.59
268 289 1.823610 AGTAGAGGGCTTAACGGTGAC 59.176 52.381 0.00 0.00 0.00 3.67
271 292 2.025131 AGAGAGTAGAGGGCTTAACGGT 60.025 50.000 0.00 0.00 0.00 4.83
272 293 2.359531 CAGAGAGTAGAGGGCTTAACGG 59.640 54.545 0.00 0.00 0.00 4.44
276 297 5.047235 GTCAAAACAGAGAGTAGAGGGCTTA 60.047 44.000 0.00 0.00 0.00 3.09
285 306 4.319477 GCGCAATTGTCAAAACAGAGAGTA 60.319 41.667 0.30 0.00 36.57 2.59
331 353 3.778629 AGTATTTGTGGACCGTCCCTTAT 59.221 43.478 15.24 6.05 35.03 1.73
332 354 3.175594 AGTATTTGTGGACCGTCCCTTA 58.824 45.455 15.24 0.00 35.03 2.69
334 356 1.553704 GAGTATTTGTGGACCGTCCCT 59.446 52.381 15.24 2.60 35.03 4.20
340 362 1.134491 CGGAGGGAGTATTTGTGGACC 60.134 57.143 0.00 0.00 0.00 4.46
352 374 3.521947 AGTAATTCGAAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
353 375 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
354 376 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
355 377 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
356 378 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
357 379 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
358 380 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
359 381 3.395671 CTGCGACAAGTAATTCGAAACG 58.604 45.455 0.00 0.09 37.43 3.60
361 383 3.064207 AGCTGCGACAAGTAATTCGAAA 58.936 40.909 0.00 0.00 37.43 3.46
362 384 2.683968 AGCTGCGACAAGTAATTCGAA 58.316 42.857 0.00 0.00 37.43 3.71
363 385 2.363788 AGCTGCGACAAGTAATTCGA 57.636 45.000 0.00 0.00 37.43 3.71
364 386 3.060272 CCATAGCTGCGACAAGTAATTCG 60.060 47.826 0.00 0.00 38.31 3.34
365 387 4.119862 TCCATAGCTGCGACAAGTAATTC 58.880 43.478 0.00 0.00 0.00 2.17
366 388 4.137116 TCCATAGCTGCGACAAGTAATT 57.863 40.909 0.00 0.00 0.00 1.40
367 389 3.819564 TCCATAGCTGCGACAAGTAAT 57.180 42.857 0.00 0.00 0.00 1.89
368 390 3.118775 ACATCCATAGCTGCGACAAGTAA 60.119 43.478 0.00 0.00 0.00 2.24
369 391 2.430694 ACATCCATAGCTGCGACAAGTA 59.569 45.455 0.00 0.00 0.00 2.24
370 392 1.208052 ACATCCATAGCTGCGACAAGT 59.792 47.619 0.00 0.00 0.00 3.16
371 393 1.945387 ACATCCATAGCTGCGACAAG 58.055 50.000 0.00 0.00 0.00 3.16
372 394 3.321968 AGATACATCCATAGCTGCGACAA 59.678 43.478 0.00 0.00 0.00 3.18
373 395 2.893489 AGATACATCCATAGCTGCGACA 59.107 45.455 0.00 0.00 0.00 4.35
374 396 3.584406 AGATACATCCATAGCTGCGAC 57.416 47.619 0.00 0.00 0.00 5.19
375 397 4.589908 TCTAGATACATCCATAGCTGCGA 58.410 43.478 0.00 0.00 0.00 5.10
376 398 4.972514 TCTAGATACATCCATAGCTGCG 57.027 45.455 0.00 0.00 0.00 5.18
377 399 6.219417 ACATCTAGATACATCCATAGCTGC 57.781 41.667 4.54 0.00 0.00 5.25
403 425 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
404 426 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
405 427 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
406 428 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
407 429 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
408 430 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
409 431 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
410 432 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
411 433 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
412 434 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
413 435 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
414 436 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
415 437 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
416 438 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
417 439 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
418 440 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
419 441 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
420 442 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
421 443 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
422 444 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
423 445 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
424 446 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
425 447 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
426 448 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
427 449 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
428 450 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
429 451 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
430 452 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
431 453 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
432 454 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
433 455 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
434 456 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
435 457 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
436 458 4.533311 AGTTACTCCCTCCGTTCCAAATTA 59.467 41.667 0.00 0.00 0.00 1.40
437 459 3.329814 AGTTACTCCCTCCGTTCCAAATT 59.670 43.478 0.00 0.00 0.00 1.82
438 460 2.910977 AGTTACTCCCTCCGTTCCAAAT 59.089 45.455 0.00 0.00 0.00 2.32
439 461 2.332117 AGTTACTCCCTCCGTTCCAAA 58.668 47.619 0.00 0.00 0.00 3.28
440 462 2.019807 AGTTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
441 463 2.225091 TGTAGTTACTCCCTCCGTTCCA 60.225 50.000 0.00 0.00 0.00 3.53
442 464 2.450476 TGTAGTTACTCCCTCCGTTCC 58.550 52.381 0.00 0.00 0.00 3.62
443 465 4.492611 CTTTGTAGTTACTCCCTCCGTTC 58.507 47.826 0.00 0.00 0.00 3.95
444 466 3.306571 GCTTTGTAGTTACTCCCTCCGTT 60.307 47.826 0.00 0.00 0.00 4.44
445 467 2.233186 GCTTTGTAGTTACTCCCTCCGT 59.767 50.000 0.00 0.00 0.00 4.69
446 468 2.734492 CGCTTTGTAGTTACTCCCTCCG 60.734 54.545 0.00 0.00 0.00 4.63
447 469 2.418334 CCGCTTTGTAGTTACTCCCTCC 60.418 54.545 0.00 0.00 0.00 4.30
448 470 2.889852 CCGCTTTGTAGTTACTCCCTC 58.110 52.381 0.00 0.00 0.00 4.30
449 471 1.066358 GCCGCTTTGTAGTTACTCCCT 60.066 52.381 0.00 0.00 0.00 4.20
450 472 1.066358 AGCCGCTTTGTAGTTACTCCC 60.066 52.381 0.00 0.00 0.00 4.30
451 473 2.381725 AGCCGCTTTGTAGTTACTCC 57.618 50.000 0.00 0.00 0.00 3.85
452 474 4.066710 CAAAGCCGCTTTGTAGTTACTC 57.933 45.455 29.91 0.00 43.85 2.59
469 491 0.657368 GTGCAAAGCGACGGTCAAAG 60.657 55.000 9.10 0.00 0.00 2.77
472 494 1.163420 AATGTGCAAAGCGACGGTCA 61.163 50.000 9.10 0.00 0.00 4.02
514 614 0.395862 TTCTGGCCGGTTTTTCCACA 60.396 50.000 12.43 0.00 35.57 4.17
527 627 3.676291 TGTTTATTTGGGCTTTCTGGC 57.324 42.857 0.00 0.00 40.96 4.85
561 662 4.557276 CGTTAAGACACGCGTAGAAAAT 57.443 40.909 13.44 0.00 32.43 1.82
614 718 2.435938 TTCCATTGTCGGCGGCTC 60.436 61.111 14.51 1.68 0.00 4.70
615 719 2.746277 GTTCCATTGTCGGCGGCT 60.746 61.111 14.51 0.00 0.00 5.52
616 720 4.160635 CGTTCCATTGTCGGCGGC 62.161 66.667 3.62 3.62 0.00 6.53
617 721 3.496131 CCGTTCCATTGTCGGCGG 61.496 66.667 7.21 0.00 37.90 6.13
618 722 2.433491 TCCGTTCCATTGTCGGCG 60.433 61.111 0.00 0.00 43.35 6.46
619 723 2.750888 GCTCCGTTCCATTGTCGGC 61.751 63.158 0.00 0.00 43.35 5.54
620 724 2.106683 GGCTCCGTTCCATTGTCGG 61.107 63.158 0.00 0.00 44.76 4.79
621 725 2.106683 GGGCTCCGTTCCATTGTCG 61.107 63.158 0.00 0.00 0.00 4.35
649 761 1.204941 GCTTCTTCGCTAGGGTTCTCA 59.795 52.381 6.70 0.00 0.00 3.27
673 785 2.027192 CCGGATAGAGAGAGAGGAGGAG 60.027 59.091 0.00 0.00 0.00 3.69
674 786 1.982226 CCGGATAGAGAGAGAGGAGGA 59.018 57.143 0.00 0.00 0.00 3.71
676 788 1.613255 GGCCGGATAGAGAGAGAGGAG 60.613 61.905 5.05 0.00 0.00 3.69
677 789 0.402504 GGCCGGATAGAGAGAGAGGA 59.597 60.000 5.05 0.00 0.00 3.71
678 790 0.958382 CGGCCGGATAGAGAGAGAGG 60.958 65.000 20.10 0.00 0.00 3.69
679 791 1.582610 GCGGCCGGATAGAGAGAGAG 61.583 65.000 29.38 0.00 0.00 3.20
680 792 1.601197 GCGGCCGGATAGAGAGAGA 60.601 63.158 29.38 0.00 0.00 3.10
715 827 1.495574 TCGAAGTTTTGGGGAGGGAAA 59.504 47.619 0.00 0.00 0.00 3.13
717 829 0.399075 GTCGAAGTTTTGGGGAGGGA 59.601 55.000 0.00 0.00 0.00 4.20
831 953 1.877576 CTGTGCAGGCAGGACTACGA 61.878 60.000 2.87 0.00 39.64 3.43
833 955 0.390472 GACTGTGCAGGCAGGACTAC 60.390 60.000 8.97 0.00 40.59 2.73
834 956 0.542938 AGACTGTGCAGGCAGGACTA 60.543 55.000 7.87 0.00 39.50 2.59
915 1037 1.297967 CGACAGTGAGAGATCCGCG 60.298 63.158 0.00 0.00 0.00 6.46
1060 1184 4.534824 ATGCATGGGAGGGCCTGC 62.535 66.667 17.94 17.94 36.25 4.85
1067 1191 2.515290 TGCTGCGATGCATGGGAG 60.515 61.111 22.98 22.98 38.13 4.30
1070 1194 1.441732 TAAGCTGCTGCGATGCATGG 61.442 55.000 2.46 3.37 45.42 3.66
1074 1198 1.086067 TCAGTAAGCTGCTGCGATGC 61.086 55.000 1.35 7.11 45.42 3.91
1076 1200 0.247460 TGTCAGTAAGCTGCTGCGAT 59.753 50.000 1.35 6.08 45.42 4.58
1077 1201 0.667487 GTGTCAGTAAGCTGCTGCGA 60.667 55.000 1.35 0.00 45.42 5.10
1233 1362 4.208873 CGCTAAGCTGAGATCTGAATCAAC 59.791 45.833 0.74 0.00 34.07 3.18
1256 1385 7.600065 TCCTACTACAGAAAATATATGTCCGC 58.400 38.462 0.00 0.00 0.00 5.54
1257 1386 8.794553 ACTCCTACTACAGAAAATATATGTCCG 58.205 37.037 0.00 0.00 0.00 4.79
1296 1430 7.939782 TCAGTTCAAACAGATATGCAGAAAAA 58.060 30.769 0.00 0.00 0.00 1.94
1298 1432 7.013178 TGTTCAGTTCAAACAGATATGCAGAAA 59.987 33.333 0.00 0.00 32.98 2.52
1299 1433 6.486320 TGTTCAGTTCAAACAGATATGCAGAA 59.514 34.615 0.00 0.00 32.98 3.02
1340 1474 0.813610 CACAACCGAGAACACCAGCA 60.814 55.000 0.00 0.00 0.00 4.41
1372 1506 3.004944 GCAACTGGGTCGATTGGTTTTTA 59.995 43.478 0.00 0.00 0.00 1.52
1397 1533 1.690283 CGCTTGCACGACAGGATCAG 61.690 60.000 0.00 0.00 34.06 2.90
1420 1556 2.468915 AGCACTAGGAGGGAAACTACC 58.531 52.381 0.00 0.00 0.00 3.18
1421 1557 4.021916 TGTAGCACTAGGAGGGAAACTAC 58.978 47.826 0.00 0.00 0.00 2.73
1464 1601 6.023435 CGATGGTTCATTACTCACACATTTG 58.977 40.000 0.00 0.00 0.00 2.32
1480 1617 0.109781 ACACATTTGCGCGATGGTTC 60.110 50.000 22.44 0.00 0.00 3.62
1481 1618 0.387112 CACACATTTGCGCGATGGTT 60.387 50.000 22.44 9.84 0.00 3.67
1487 1624 2.035508 GCATTTATCACACATTTGCGCG 60.036 45.455 0.00 0.00 0.00 6.86
1489 1626 3.919197 TGTGCATTTATCACACATTTGCG 59.081 39.130 0.00 0.00 39.29 4.85
1490 1627 5.842619 TTGTGCATTTATCACACATTTGC 57.157 34.783 0.00 0.00 43.34 3.68
1491 1628 6.308524 ACGATTGTGCATTTATCACACATTTG 59.691 34.615 0.00 0.00 43.34 2.32
1492 1629 6.308524 CACGATTGTGCATTTATCACACATTT 59.691 34.615 0.00 0.00 43.34 2.32
1493 1630 5.801444 CACGATTGTGCATTTATCACACATT 59.199 36.000 0.00 0.00 43.34 2.71
1494 1631 5.334319 CACGATTGTGCATTTATCACACAT 58.666 37.500 0.00 0.00 43.34 3.21
1519 1743 7.883217 AGAAACCATCATATTTGCTCATCATC 58.117 34.615 0.00 0.00 0.00 2.92
1522 1746 7.361127 CAGAGAAACCATCATATTTGCTCATC 58.639 38.462 0.00 0.00 0.00 2.92
1525 1749 5.066893 TGCAGAGAAACCATCATATTTGCTC 59.933 40.000 0.00 0.00 0.00 4.26
1528 1893 5.450965 GGGTGCAGAGAAACCATCATATTTG 60.451 44.000 0.00 0.00 38.27 2.32
1534 1899 1.067295 AGGGTGCAGAGAAACCATCA 58.933 50.000 0.00 0.00 38.27 3.07
1556 1922 1.068434 ACAAAGGGCAATTGGTTGACG 59.932 47.619 7.72 0.00 44.70 4.35
1562 1928 2.906691 TTGTGACAAAGGGCAATTGG 57.093 45.000 7.72 0.00 32.02 3.16
1577 1943 2.386661 ACTAAGAGGGCGACATTGTG 57.613 50.000 0.00 0.00 0.00 3.33
1581 1947 1.409427 GCAGTACTAAGAGGGCGACAT 59.591 52.381 0.00 0.00 0.00 3.06
1583 1949 0.815734 TGCAGTACTAAGAGGGCGAC 59.184 55.000 0.00 0.00 0.00 5.19
1585 1951 2.271800 CTTTGCAGTACTAAGAGGGCG 58.728 52.381 0.00 0.00 33.49 6.13
1587 1953 7.626452 GCATTTAACTTTGCAGTACTAAGAGGG 60.626 40.741 10.24 0.00 38.72 4.30
1594 1960 4.513692 TGACGCATTTAACTTTGCAGTACT 59.486 37.500 0.00 0.00 38.80 2.73
1614 1980 6.144886 TCTGTGATAACATGTTACGTGTTGAC 59.855 38.462 27.19 20.71 39.88 3.18
1615 1981 6.217294 TCTGTGATAACATGTTACGTGTTGA 58.783 36.000 27.19 14.92 39.88 3.18
1616 1982 6.460664 TCTGTGATAACATGTTACGTGTTG 57.539 37.500 27.19 13.15 39.88 3.33
1620 1986 8.662141 GGTAAAATCTGTGATAACATGTTACGT 58.338 33.333 20.26 5.93 0.00 3.57
1621 1987 8.120465 GGGTAAAATCTGTGATAACATGTTACG 58.880 37.037 20.26 7.71 0.00 3.18
1626 1992 6.319658 AGCAGGGTAAAATCTGTGATAACATG 59.680 38.462 0.00 0.00 33.81 3.21
1632 2017 4.922206 TCAAGCAGGGTAAAATCTGTGAT 58.078 39.130 0.00 0.00 33.81 3.06
1645 2030 5.345702 CAATCATAAACACATCAAGCAGGG 58.654 41.667 0.00 0.00 0.00 4.45
1647 2032 5.404096 TGCAATCATAAACACATCAAGCAG 58.596 37.500 0.00 0.00 0.00 4.24
1648 2033 5.388408 TGCAATCATAAACACATCAAGCA 57.612 34.783 0.00 0.00 0.00 3.91
1659 2044 5.212532 ACCAGTTTGCTTGCAATCATAAA 57.787 34.783 15.79 0.00 0.00 1.40
1705 2090 6.238786 CGCCTAGAGATCTAGCTTTTCTACAA 60.239 42.308 10.80 0.00 43.47 2.41
1707 2092 5.470777 TCGCCTAGAGATCTAGCTTTTCTAC 59.529 44.000 10.80 0.00 43.47 2.59
1709 2094 4.277423 GTCGCCTAGAGATCTAGCTTTTCT 59.723 45.833 10.80 0.00 43.47 2.52
1715 2100 3.058501 GTGAAGTCGCCTAGAGATCTAGC 60.059 52.174 10.80 6.37 43.47 3.42
1722 2108 1.067565 TGCAAGTGAAGTCGCCTAGAG 60.068 52.381 0.00 0.00 0.00 2.43
1734 2120 2.959030 AGACTACTGTCAGTGCAAGTGA 59.041 45.455 16.03 0.00 45.77 3.41
1756 2142 3.611057 GCAACTGATGGAAGTCTGCAAAG 60.611 47.826 0.00 0.00 35.79 2.77
1774 2160 3.673323 GCAGCACTATTACCAAAGGCAAC 60.673 47.826 0.00 0.00 0.00 4.17
1798 2184 7.040478 TGCATTGAACTTTGCAGTATTAAGAGT 60.040 33.333 2.16 0.00 43.54 3.24
1862 2409 0.250901 GGTTGAGGAAAGGCTGCAGA 60.251 55.000 20.43 0.00 0.00 4.26
1885 2432 5.327737 AGGGAACACAATTACCAAAGGTA 57.672 39.130 0.00 0.00 37.09 3.08
1898 2445 2.507484 CAGCATGAAGAAGGGAACACA 58.493 47.619 0.00 0.00 39.69 3.72
1968 2515 8.278729 TGCAGTTTACATCATAATCACATCAA 57.721 30.769 0.00 0.00 0.00 2.57
2056 2633 0.108662 GGCTGCACCAAAACTATGGC 60.109 55.000 0.50 0.00 44.75 4.40
2079 2656 6.260050 ACACTATTTACCAAAGGCATATCACG 59.740 38.462 0.00 0.00 0.00 4.35
2084 2661 8.984855 AGTACTACACTATTTACCAAAGGCATA 58.015 33.333 0.00 0.00 34.98 3.14
2098 2675 7.280205 GCATTTAACCTTGCAGTACTACACTAT 59.720 37.037 0.00 0.00 38.72 2.12
2099 2676 6.592607 GCATTTAACCTTGCAGTACTACACTA 59.407 38.462 0.00 0.00 38.72 2.74
2100 2677 5.411669 GCATTTAACCTTGCAGTACTACACT 59.588 40.000 0.00 0.00 38.72 3.55
2167 2744 0.462225 CTGATGAGAGGCTGCACAGG 60.462 60.000 0.50 0.00 0.00 4.00
2189 2766 5.599656 ACGTTGGTAGCACTATAATAAGGGA 59.400 40.000 0.00 0.00 0.00 4.20
2195 2772 7.597743 GCAGTATTACGTTGGTAGCACTATAAT 59.402 37.037 0.00 1.95 0.00 1.28
2197 2774 6.441274 GCAGTATTACGTTGGTAGCACTATA 58.559 40.000 0.00 0.00 0.00 1.31
2206 2783 3.308438 ACTTCGCAGTATTACGTTGGT 57.692 42.857 0.00 0.00 0.00 3.67
2208 2785 4.896562 TCAACTTCGCAGTATTACGTTG 57.103 40.909 0.00 0.00 30.68 4.10
2210 2787 5.636121 TGAATTCAACTTCGCAGTATTACGT 59.364 36.000 5.45 0.00 30.68 3.57
2212 2789 7.290857 TCTGAATTCAACTTCGCAGTATTAC 57.709 36.000 9.88 0.00 30.68 1.89
2221 2798 5.269459 ACACGATTCTGAATTCAACTTCG 57.731 39.130 22.09 22.09 0.00 3.79
2250 2827 7.491696 GGTGCAGAGAAACTATCGTATTTACTT 59.508 37.037 0.00 0.00 0.00 2.24
2274 2851 3.564225 GGACAATTGACTGACGAAAAGGT 59.436 43.478 13.59 0.00 0.00 3.50
2281 2858 3.032017 ACAGAGGACAATTGACTGACG 57.968 47.619 13.59 3.49 33.53 4.35
2294 2871 1.292223 GCGGCACTGTTACAGAGGA 59.708 57.895 20.07 0.00 35.18 3.71
2317 2894 4.202020 TGCATTTAACGTTGCAGTACCAAA 60.202 37.500 11.99 0.76 43.54 3.28
2352 2929 5.497474 ACAAGATGGTTGGTTACTGATACC 58.503 41.667 0.00 0.00 36.17 2.73
2467 3059 4.460263 AGTGCAGTCACCTAGAGATCTAG 58.540 47.826 9.52 9.52 44.16 2.43
2674 3266 0.031994 GGATGTTGTTGCCACCACAC 59.968 55.000 0.00 0.00 31.62 3.82
2696 3288 0.172578 GAAACGGTGCATTTAGGGGC 59.827 55.000 0.00 0.00 0.00 5.80
2699 3291 2.556622 ACAAGGAAACGGTGCATTTAGG 59.443 45.455 0.00 0.00 0.00 2.69
2731 3323 1.128692 GATGTTAGTGGACGCAGCAAC 59.871 52.381 0.00 0.00 0.00 4.17
2846 3438 0.392706 CGATGATGACCGAATCCCCA 59.607 55.000 0.00 0.00 0.00 4.96
2918 3510 2.619013 AACAGCAGCATAGCGAAAAC 57.381 45.000 0.00 0.00 40.15 2.43
3029 3621 5.734720 ACGTGAATTCATAACATCCAGACT 58.265 37.500 12.12 0.00 0.00 3.24
3097 3690 5.744007 GCAGACCAGACATATTGATGATCCA 60.744 44.000 0.00 0.00 36.48 3.41
3116 3709 3.244044 ACTGAAAACTCTCTCCAGCAGAC 60.244 47.826 0.00 0.00 0.00 3.51
3117 3710 2.968574 ACTGAAAACTCTCTCCAGCAGA 59.031 45.455 0.00 0.00 0.00 4.26
3118 3711 3.399440 ACTGAAAACTCTCTCCAGCAG 57.601 47.619 0.00 0.00 0.00 4.24
3119 3712 3.845781 AACTGAAAACTCTCTCCAGCA 57.154 42.857 0.00 0.00 0.00 4.41
3120 3713 4.130118 TGAAACTGAAAACTCTCTCCAGC 58.870 43.478 0.00 0.00 0.00 4.85
3157 3750 3.362986 CGATTCACAAACTCAGTGGAACG 60.363 47.826 0.00 0.00 45.86 3.95
3164 3757 4.377431 GCAACTACCGATTCACAAACTCAG 60.377 45.833 0.00 0.00 0.00 3.35
3192 3785 7.946655 ATATATCATATTGCAATACGACGGG 57.053 36.000 21.10 7.35 0.00 5.28
3277 3899 1.368019 CGTGTGCACAGCAGTTTCG 60.368 57.895 22.40 14.60 40.08 3.46
3278 3900 0.316196 GTCGTGTGCACAGCAGTTTC 60.316 55.000 22.40 5.45 40.08 2.78
3279 3901 1.024046 TGTCGTGTGCACAGCAGTTT 61.024 50.000 22.40 0.00 40.08 2.66
3280 3902 0.815213 ATGTCGTGTGCACAGCAGTT 60.815 50.000 22.40 2.46 40.08 3.16
3281 3903 0.033366 TATGTCGTGTGCACAGCAGT 59.967 50.000 22.40 8.29 40.08 4.40
3282 3904 1.362768 ATATGTCGTGTGCACAGCAG 58.637 50.000 22.40 14.88 40.08 4.24
3283 3905 2.539476 CTATATGTCGTGTGCACAGCA 58.461 47.619 22.40 19.27 35.60 4.41
3284 3906 1.860950 CCTATATGTCGTGTGCACAGC 59.139 52.381 22.40 14.04 0.00 4.40
3285 3907 2.159099 ACCCTATATGTCGTGTGCACAG 60.159 50.000 22.40 14.50 0.00 3.66
3286 3908 1.828595 ACCCTATATGTCGTGTGCACA 59.171 47.619 17.42 17.42 0.00 4.57
3287 3909 2.159156 TCACCCTATATGTCGTGTGCAC 60.159 50.000 10.75 10.75 0.00 4.57
3288 3910 2.104170 TCACCCTATATGTCGTGTGCA 58.896 47.619 0.00 0.00 0.00 4.57
3289 3911 2.864343 GTTCACCCTATATGTCGTGTGC 59.136 50.000 0.00 0.00 0.00 4.57
3290 3912 3.113322 CGTTCACCCTATATGTCGTGTG 58.887 50.000 0.00 0.00 0.00 3.82
3291 3913 3.018856 TCGTTCACCCTATATGTCGTGT 58.981 45.455 0.00 0.00 0.00 4.49
3292 3914 3.369385 GTCGTTCACCCTATATGTCGTG 58.631 50.000 0.00 0.00 0.00 4.35
3293 3915 2.360165 GGTCGTTCACCCTATATGTCGT 59.640 50.000 0.00 0.00 39.69 4.34
3294 3916 3.009301 GGTCGTTCACCCTATATGTCG 57.991 52.381 0.00 0.00 39.69 4.35
3304 3926 2.604174 CGTGCAAGGGTCGTTCACC 61.604 63.158 0.00 0.00 45.97 4.02
3305 3927 0.949105 ATCGTGCAAGGGTCGTTCAC 60.949 55.000 0.00 0.00 0.00 3.18
3306 3928 0.948623 CATCGTGCAAGGGTCGTTCA 60.949 55.000 0.00 0.00 0.00 3.18
3307 3929 1.635663 CCATCGTGCAAGGGTCGTTC 61.636 60.000 0.00 0.00 0.00 3.95
3308 3930 1.671054 CCATCGTGCAAGGGTCGTT 60.671 57.895 0.00 0.00 0.00 3.85
3309 3931 2.047274 CCATCGTGCAAGGGTCGT 60.047 61.111 0.00 0.00 0.00 4.34
3310 3932 2.047274 ACCATCGTGCAAGGGTCG 60.047 61.111 0.00 0.00 0.00 4.79
3311 3933 3.730160 ATGGACCATCGTGCAAGGGTC 62.730 57.143 12.76 12.76 44.18 4.46
3312 3934 1.852157 ATGGACCATCGTGCAAGGGT 61.852 55.000 0.00 0.00 44.18 4.34
3313 3935 1.077501 ATGGACCATCGTGCAAGGG 60.078 57.895 0.00 0.00 44.18 3.95
3314 3936 1.097547 GGATGGACCATCGTGCAAGG 61.098 60.000 24.94 0.00 44.18 3.61
3315 3937 0.392863 TGGATGGACCATCGTGCAAG 60.393 55.000 24.94 0.00 44.18 4.01
3316 3938 1.682257 TGGATGGACCATCGTGCAA 59.318 52.632 24.94 8.06 44.18 4.08
3317 3939 3.397906 TGGATGGACCATCGTGCA 58.602 55.556 24.94 16.08 45.16 4.57
3325 3947 2.700773 GCAAACCGCTGGATGGACC 61.701 63.158 1.50 0.00 37.77 4.46
3326 3948 1.523154 TTGCAAACCGCTGGATGGAC 61.523 55.000 0.00 0.00 43.06 4.02
3327 3949 0.825425 TTTGCAAACCGCTGGATGGA 60.825 50.000 8.05 0.00 43.06 3.41
3328 3950 0.667184 GTTTGCAAACCGCTGGATGG 60.667 55.000 28.29 0.00 43.06 3.51
3329 3951 0.031857 TGTTTGCAAACCGCTGGATG 59.968 50.000 33.33 2.20 43.06 3.51
3330 3952 0.749649 TTGTTTGCAAACCGCTGGAT 59.250 45.000 33.33 0.00 43.06 3.41
3331 3953 0.179124 GTTGTTTGCAAACCGCTGGA 60.179 50.000 33.33 15.47 43.06 3.86
3332 3954 0.179113 AGTTGTTTGCAAACCGCTGG 60.179 50.000 33.33 0.00 43.06 4.85
3333 3955 1.639280 AAGTTGTTTGCAAACCGCTG 58.361 45.000 33.33 0.00 43.06 5.18
3334 3956 2.378445 AAAGTTGTTTGCAAACCGCT 57.622 40.000 33.33 27.24 43.06 5.52
3335 3957 2.768222 CAAAAGTTGTTTGCAAACCGC 58.232 42.857 33.33 25.77 38.11 5.68
3343 3965 4.094590 TCCATGCAAAGCAAAAGTTGTTTG 59.905 37.500 0.00 9.62 43.62 2.93
3344 3966 4.260170 TCCATGCAAAGCAAAAGTTGTTT 58.740 34.783 0.00 0.00 43.62 2.83
3345 3967 3.871485 TCCATGCAAAGCAAAAGTTGTT 58.129 36.364 0.00 0.00 43.62 2.83
3346 3968 3.540314 TCCATGCAAAGCAAAAGTTGT 57.460 38.095 0.00 0.00 43.62 3.32
3347 3969 3.187637 CCATCCATGCAAAGCAAAAGTTG 59.812 43.478 0.00 0.00 43.62 3.16
3348 3970 3.404899 CCATCCATGCAAAGCAAAAGTT 58.595 40.909 0.00 0.00 43.62 2.66
3349 3971 2.872842 GCCATCCATGCAAAGCAAAAGT 60.873 45.455 0.00 0.00 43.62 2.66
3350 3972 1.735571 GCCATCCATGCAAAGCAAAAG 59.264 47.619 0.00 0.00 43.62 2.27
3351 3973 1.348366 AGCCATCCATGCAAAGCAAAA 59.652 42.857 0.00 0.00 43.62 2.44
3352 3974 0.978151 AGCCATCCATGCAAAGCAAA 59.022 45.000 0.00 0.00 43.62 3.68
3353 3975 0.978151 AAGCCATCCATGCAAAGCAA 59.022 45.000 0.00 0.00 43.62 3.91
3354 3976 0.248012 CAAGCCATCCATGCAAAGCA 59.752 50.000 0.00 0.00 44.86 3.91
3355 3977 0.533491 TCAAGCCATCCATGCAAAGC 59.467 50.000 0.00 0.00 0.00 3.51
3356 3978 3.194861 CATTCAAGCCATCCATGCAAAG 58.805 45.455 0.00 0.00 0.00 2.77
3357 3979 2.093394 CCATTCAAGCCATCCATGCAAA 60.093 45.455 0.00 0.00 0.00 3.68
3358 3980 1.483004 CCATTCAAGCCATCCATGCAA 59.517 47.619 0.00 0.00 0.00 4.08
3359 3981 1.116308 CCATTCAAGCCATCCATGCA 58.884 50.000 0.00 0.00 0.00 3.96
3360 3982 0.391597 CCCATTCAAGCCATCCATGC 59.608 55.000 0.00 0.00 0.00 4.06
3361 3983 1.784358 ACCCATTCAAGCCATCCATG 58.216 50.000 0.00 0.00 0.00 3.66
3362 3984 2.112998 CAACCCATTCAAGCCATCCAT 58.887 47.619 0.00 0.00 0.00 3.41
3363 3985 1.203162 ACAACCCATTCAAGCCATCCA 60.203 47.619 0.00 0.00 0.00 3.41
3364 3986 1.478105 GACAACCCATTCAAGCCATCC 59.522 52.381 0.00 0.00 0.00 3.51
3365 3987 1.133025 CGACAACCCATTCAAGCCATC 59.867 52.381 0.00 0.00 0.00 3.51
3366 3988 1.176527 CGACAACCCATTCAAGCCAT 58.823 50.000 0.00 0.00 0.00 4.40
3367 3989 0.179004 ACGACAACCCATTCAAGCCA 60.179 50.000 0.00 0.00 0.00 4.75
3368 3990 0.958822 AACGACAACCCATTCAAGCC 59.041 50.000 0.00 0.00 0.00 4.35
3369 3991 1.606668 TGAACGACAACCCATTCAAGC 59.393 47.619 0.00 0.00 0.00 4.01
3370 3992 5.621197 TTATGAACGACAACCCATTCAAG 57.379 39.130 0.00 0.00 34.88 3.02
3371 3993 6.582677 ATTTATGAACGACAACCCATTCAA 57.417 33.333 0.00 0.00 34.88 2.69
3372 3994 5.163804 CGATTTATGAACGACAACCCATTCA 60.164 40.000 0.00 0.00 35.64 2.57
3373 3995 5.163794 ACGATTTATGAACGACAACCCATTC 60.164 40.000 0.00 0.00 0.00 2.67
3374 3996 4.698304 ACGATTTATGAACGACAACCCATT 59.302 37.500 0.00 0.00 0.00 3.16
3375 3997 4.258543 ACGATTTATGAACGACAACCCAT 58.741 39.130 0.00 0.00 0.00 4.00
3376 3998 3.666274 ACGATTTATGAACGACAACCCA 58.334 40.909 0.00 0.00 0.00 4.51
3377 3999 3.930848 AGACGATTTATGAACGACAACCC 59.069 43.478 0.00 0.00 0.00 4.11
3378 4000 5.275602 CGTAGACGATTTATGAACGACAACC 60.276 44.000 0.00 0.00 43.02 3.77
3379 4001 5.284660 ACGTAGACGATTTATGAACGACAAC 59.715 40.000 9.41 0.00 43.02 3.32
3380 4002 5.393124 ACGTAGACGATTTATGAACGACAA 58.607 37.500 9.41 0.00 43.02 3.18
3381 4003 4.973396 ACGTAGACGATTTATGAACGACA 58.027 39.130 9.41 0.00 43.02 4.35
3382 4004 6.138236 CAGTACGTAGACGATTTATGAACGAC 59.862 42.308 9.41 0.00 43.02 4.34
3383 4005 6.183360 ACAGTACGTAGACGATTTATGAACGA 60.183 38.462 9.41 0.00 43.02 3.85
3384 4006 5.961843 ACAGTACGTAGACGATTTATGAACG 59.038 40.000 9.41 0.00 43.02 3.95
3385 4007 6.138236 CGACAGTACGTAGACGATTTATGAAC 59.862 42.308 9.41 0.00 43.02 3.18
3386 4008 6.183360 ACGACAGTACGTAGACGATTTATGAA 60.183 38.462 9.41 0.00 44.72 2.57
3387 4009 5.291858 ACGACAGTACGTAGACGATTTATGA 59.708 40.000 9.41 0.00 44.72 2.15
3388 4010 5.496387 ACGACAGTACGTAGACGATTTATG 58.504 41.667 9.41 3.08 44.72 1.90
3389 4011 5.521735 AGACGACAGTACGTAGACGATTTAT 59.478 40.000 9.41 0.00 46.52 1.40
3390 4012 4.864806 AGACGACAGTACGTAGACGATTTA 59.135 41.667 9.41 0.00 46.52 1.40
3391 4013 3.681897 AGACGACAGTACGTAGACGATTT 59.318 43.478 9.41 0.00 46.52 2.17
3392 4014 3.061831 CAGACGACAGTACGTAGACGATT 59.938 47.826 9.41 0.00 46.52 3.34
3393 4015 2.602211 CAGACGACAGTACGTAGACGAT 59.398 50.000 9.41 0.00 46.52 3.73
3394 4016 1.988467 CAGACGACAGTACGTAGACGA 59.012 52.381 9.41 0.00 46.52 4.20
3395 4017 1.723542 ACAGACGACAGTACGTAGACG 59.276 52.381 0.00 0.00 46.52 4.18
3396 4018 5.332205 GCTATACAGACGACAGTACGTAGAC 60.332 48.000 0.00 0.00 46.52 2.59
3397 4019 4.742167 GCTATACAGACGACAGTACGTAGA 59.258 45.833 0.00 0.00 46.52 2.59
3398 4020 4.505556 TGCTATACAGACGACAGTACGTAG 59.494 45.833 0.00 0.00 46.52 3.51
3399 4021 4.432712 TGCTATACAGACGACAGTACGTA 58.567 43.478 0.00 0.00 46.52 3.57
3401 4023 3.938778 TGCTATACAGACGACAGTACG 57.061 47.619 0.00 0.00 39.31 3.67
3413 4035 4.470334 TTGACATCAGCACTGCTATACA 57.530 40.909 2.39 0.00 36.40 2.29
3414 4036 5.998454 ATTTGACATCAGCACTGCTATAC 57.002 39.130 2.39 0.00 36.40 1.47
3415 4037 5.698089 GCTATTTGACATCAGCACTGCTATA 59.302 40.000 2.39 0.00 36.40 1.31
3416 4038 4.514441 GCTATTTGACATCAGCACTGCTAT 59.486 41.667 2.39 0.00 36.40 2.97
3417 4039 3.873361 GCTATTTGACATCAGCACTGCTA 59.127 43.478 2.39 0.00 36.40 3.49
3418 4040 2.681848 GCTATTTGACATCAGCACTGCT 59.318 45.455 0.00 0.00 40.77 4.24
3419 4041 2.538333 CGCTATTTGACATCAGCACTGC 60.538 50.000 0.00 0.00 33.55 4.40
3420 4042 2.931969 TCGCTATTTGACATCAGCACTG 59.068 45.455 0.00 0.00 33.55 3.66
3421 4043 3.193263 CTCGCTATTTGACATCAGCACT 58.807 45.455 0.00 0.00 33.55 4.40
3422 4044 2.286294 CCTCGCTATTTGACATCAGCAC 59.714 50.000 0.00 0.00 33.55 4.40
3423 4045 2.554142 CCTCGCTATTTGACATCAGCA 58.446 47.619 0.00 0.00 33.55 4.41
3424 4046 1.869767 CCCTCGCTATTTGACATCAGC 59.130 52.381 0.00 0.00 0.00 4.26
3425 4047 1.869767 GCCCTCGCTATTTGACATCAG 59.130 52.381 0.00 0.00 0.00 2.90
3426 4048 1.486310 AGCCCTCGCTATTTGACATCA 59.514 47.619 0.00 0.00 46.08 3.07
3427 4049 2.246719 AGCCCTCGCTATTTGACATC 57.753 50.000 0.00 0.00 46.08 3.06
3438 4060 2.982744 GCAACAAAGGAGCCCTCGC 61.983 63.158 0.00 0.00 30.89 5.03
3451 4073 6.795144 ATCCCATGAAATTCTATTGCAACA 57.205 33.333 0.00 0.00 0.00 3.33
3469 4091 4.806952 ATTCCCGAGGATAAAAATCCCA 57.193 40.909 0.75 0.00 41.65 4.37
3470 4092 7.776618 AAATATTCCCGAGGATAAAAATCCC 57.223 36.000 0.75 0.00 41.65 3.85
3507 4129 2.740981 GTGCAAATGACTCCTGAGTGAG 59.259 50.000 4.19 0.00 42.66 3.51
3559 4182 0.600782 GGCAAACGAACTCCACGGTA 60.601 55.000 0.00 0.00 34.93 4.02
3632 4285 5.418840 ACCTAAACGGCATCTTTTGATTCAT 59.581 36.000 0.00 0.00 34.71 2.57
3633 4286 4.764823 ACCTAAACGGCATCTTTTGATTCA 59.235 37.500 0.00 0.00 34.71 2.57
3634 4287 5.095490 CACCTAAACGGCATCTTTTGATTC 58.905 41.667 0.00 0.00 34.71 2.52
3635 4288 4.522789 ACACCTAAACGGCATCTTTTGATT 59.477 37.500 0.00 0.00 34.71 2.57
3637 4290 3.482436 ACACCTAAACGGCATCTTTTGA 58.518 40.909 0.00 0.00 35.61 2.69
3638 4291 3.502211 AGACACCTAAACGGCATCTTTTG 59.498 43.478 0.00 0.00 35.61 2.44
3683 4431 1.135517 GCCACGTTTTTATGGCGTCAT 60.136 47.619 8.02 8.02 37.71 3.06
3720 4470 4.895668 AGGTGAATGGTGCATTGATTTT 57.104 36.364 0.00 0.00 33.90 1.82
3759 4509 6.159575 TGGACCCTTGGATATTTGAATGAGTA 59.840 38.462 0.00 0.00 0.00 2.59
3761 4511 5.448654 TGGACCCTTGGATATTTGAATGAG 58.551 41.667 0.00 0.00 0.00 2.90
3762 4512 5.464588 TGGACCCTTGGATATTTGAATGA 57.535 39.130 0.00 0.00 0.00 2.57
3765 4515 5.134339 AGCTATGGACCCTTGGATATTTGAA 59.866 40.000 0.00 0.00 0.00 2.69
3771 4521 3.242867 CTGAGCTATGGACCCTTGGATA 58.757 50.000 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.