Multiple sequence alignment - TraesCS5A01G527800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G527800 chr5A 100.000 3980 0 0 1 3980 688241473 688245452 0.000000e+00 7350.0
1 TraesCS5A01G527800 chr5A 92.272 854 47 7 1736 2572 609823428 609822577 0.000000e+00 1194.0
2 TraesCS5A01G527800 chr5A 85.895 631 60 19 2425 3032 680364641 680365265 0.000000e+00 645.0
3 TraesCS5A01G527800 chr5A 89.729 516 37 4 168 667 688155203 688155718 0.000000e+00 645.0
4 TraesCS5A01G527800 chr5A 89.630 405 34 4 2709 3112 609822487 609822090 3.550000e-140 508.0
5 TraesCS5A01G527800 chr5A 87.317 205 22 4 3398 3600 680365717 680365919 8.600000e-57 231.0
6 TraesCS5A01G527800 chr5A 84.298 242 18 10 1 236 688154891 688155118 6.700000e-53 219.0
7 TraesCS5A01G527800 chr5A 95.536 112 5 0 163 274 682882469 682882580 3.160000e-41 180.0
8 TraesCS5A01G527800 chr5A 94.737 114 6 0 163 276 476631372 476631259 1.140000e-40 178.0
9 TraesCS5A01G527800 chr5A 85.526 76 9 2 616 690 53611539 53611465 1.190000e-10 78.7
10 TraesCS5A01G527800 chr4D 89.019 1703 123 33 1477 3155 503668962 503670624 0.000000e+00 2050.0
11 TraesCS5A01G527800 chr4D 87.392 809 57 18 3202 3980 503670623 503671416 0.000000e+00 887.0
12 TraesCS5A01G527800 chr4D 86.000 650 44 22 2035 2665 503639662 503640283 0.000000e+00 652.0
13 TraesCS5A01G527800 chr4D 92.857 280 15 3 921 1200 503668296 503668570 6.200000e-108 401.0
14 TraesCS5A01G527800 chr4D 81.091 550 54 14 3398 3917 503666130 503666659 1.040000e-105 394.0
15 TraesCS5A01G527800 chr4D 97.462 197 5 0 1004 1200 503639118 503639314 1.770000e-88 337.0
16 TraesCS5A01G527800 chr4D 82.727 330 43 8 273 591 503629620 503629946 8.420000e-72 281.0
17 TraesCS5A01G527800 chr4D 90.526 190 10 3 1741 1930 503639481 503639662 1.100000e-60 244.0
18 TraesCS5A01G527800 chr4D 88.439 173 13 6 3227 3398 503665884 503666050 6.740000e-48 202.0
19 TraesCS5A01G527800 chr4D 83.333 204 13 7 1 203 497581601 497581418 6.840000e-38 169.0
20 TraesCS5A01G527800 chr4B 87.279 1753 149 28 1506 3221 649491097 649492812 0.000000e+00 1934.0
21 TraesCS5A01G527800 chr4B 86.523 512 23 13 713 1202 649490198 649490685 4.560000e-144 521.0
22 TraesCS5A01G527800 chr4B 82.394 426 62 4 3403 3827 649517086 649517499 3.780000e-95 359.0
23 TraesCS5A01G527800 chr4B 84.393 173 21 4 3228 3399 649516841 649517008 8.850000e-37 165.0
24 TraesCS5A01G527800 chr4B 87.324 142 14 4 1198 1335 649490722 649490863 4.120000e-35 159.0
25 TraesCS5A01G527800 chr7A 91.958 858 51 7 1736 2577 672599040 672598185 0.000000e+00 1186.0
26 TraesCS5A01G527800 chr7A 91.715 857 51 8 1738 2577 113795364 113796217 0.000000e+00 1171.0
27 TraesCS5A01G527800 chr7A 91.907 729 46 8 1860 2577 674116071 674115345 0.000000e+00 1007.0
28 TraesCS5A01G527800 chr7A 89.409 406 33 6 2709 3112 113796302 113796699 1.650000e-138 503.0
29 TraesCS5A01G527800 chr7A 88.642 405 38 4 2709 3112 674115260 674114863 1.660000e-133 486.0
30 TraesCS5A01G527800 chr7A 86.885 427 50 4 2709 3133 672598100 672597678 1.290000e-129 473.0
31 TraesCS5A01G527800 chr7A 89.412 170 14 4 967 1134 513412782 513412949 1.120000e-50 211.0
32 TraesCS5A01G527800 chr7A 95.652 115 5 0 1736 1850 674121289 674121175 6.790000e-43 185.0
33 TraesCS5A01G527800 chr7A 92.500 80 6 0 273 352 462342526 462342605 9.040000e-22 115.0
34 TraesCS5A01G527800 chr4A 91.949 857 54 5 1736 2577 17245231 17246087 0.000000e+00 1186.0
35 TraesCS5A01G527800 chr4A 87.067 433 44 6 2709 3133 17246172 17246600 2.780000e-131 479.0
36 TraesCS5A01G527800 chr3A 91.618 859 42 13 1736 2577 697520553 697521398 0.000000e+00 1160.0
37 TraesCS5A01G527800 chr3A 89.877 405 33 4 2709 3112 697521483 697521880 7.630000e-142 514.0
38 TraesCS5A01G527800 chr3A 78.431 510 81 18 2249 2742 700908744 700909240 5.000000e-79 305.0
39 TraesCS5A01G527800 chr3A 80.919 283 27 17 933 1202 700952255 700952523 8.720000e-47 198.0
40 TraesCS5A01G527800 chr3A 93.913 115 7 0 163 277 108509128 108509014 1.470000e-39 174.0
41 TraesCS5A01G527800 chr3A 88.235 136 14 2 1000 1134 701122281 701122415 1.140000e-35 161.0
42 TraesCS5A01G527800 chr3A 82.143 112 19 1 577 688 371092691 371092581 1.180000e-15 95.3
43 TraesCS5A01G527800 chr1B 91.171 589 41 8 1736 2313 117290240 117289652 0.000000e+00 789.0
44 TraesCS5A01G527800 chr1B 95.455 110 5 0 163 272 29161595 29161704 4.090000e-40 176.0
45 TraesCS5A01G527800 chr6B 84.982 273 20 5 1 272 213644531 213644783 1.420000e-64 257.0
46 TraesCS5A01G527800 chr2B 86.702 188 11 8 11 197 3946923 3947097 3.140000e-46 196.0
47 TraesCS5A01G527800 chr2B 85.204 196 13 7 3 197 4216826 4217006 1.890000e-43 187.0
48 TraesCS5A01G527800 chr2B 87.248 149 15 2 986 1134 704575118 704575262 2.460000e-37 167.0
49 TraesCS5A01G527800 chr2B 92.391 92 7 0 285 376 680321111 680321020 8.970000e-27 132.0
50 TraesCS5A01G527800 chr2B 84.615 78 12 0 596 673 794787714 794787637 1.190000e-10 78.7
51 TraesCS5A01G527800 chr7B 84.865 185 19 5 953 1134 435792350 435792172 1.140000e-40 178.0
52 TraesCS5A01G527800 chr7B 92.500 80 6 0 273 352 413109854 413109933 9.040000e-22 115.0
53 TraesCS5A01G527800 chr7B 79.279 111 20 3 581 690 566463640 566463532 1.530000e-09 75.0
54 TraesCS5A01G527800 chr2D 81.116 233 34 9 909 1134 584624599 584624828 1.140000e-40 178.0
55 TraesCS5A01G527800 chr7D 84.343 198 11 6 1 197 70738601 70738779 4.090000e-40 176.0
56 TraesCS5A01G527800 chr7D 86.395 147 16 3 988 1134 419770041 419769899 1.480000e-34 158.0
57 TraesCS5A01G527800 chr7D 92.500 80 6 0 273 352 403784238 403784317 9.040000e-22 115.0
58 TraesCS5A01G527800 chr1A 95.455 110 5 0 163 272 440089360 440089251 4.090000e-40 176.0
59 TraesCS5A01G527800 chr6D 94.643 112 6 0 163 274 462686351 462686240 1.470000e-39 174.0
60 TraesCS5A01G527800 chr6D 82.456 114 20 0 577 690 467817550 467817437 2.530000e-17 100.0
61 TraesCS5A01G527800 chr5D 91.200 125 9 2 149 272 76563495 76563618 6.840000e-38 169.0
62 TraesCS5A01G527800 chr5D 82.353 85 11 2 610 690 128544415 128544499 1.980000e-08 71.3
63 TraesCS5A01G527800 chr3B 91.803 122 9 1 163 284 738508800 738508680 6.840000e-38 169.0
64 TraesCS5A01G527800 chr3B 89.076 119 11 2 1017 1134 754769211 754769328 3.210000e-31 147.0
65 TraesCS5A01G527800 chr1D 83.582 201 12 7 1 200 395082346 395082166 6.840000e-38 169.0
66 TraesCS5A01G527800 chr1D 82.323 198 15 6 1 197 479621819 479621997 1.920000e-33 154.0
67 TraesCS5A01G527800 chr3D 83.333 198 12 8 1 197 57033102 57033279 3.180000e-36 163.0
68 TraesCS5A01G527800 chr5B 82.883 111 19 0 577 687 426556732 426556842 2.530000e-17 100.0
69 TraesCS5A01G527800 chr5B 85.185 81 12 0 610 690 677542051 677542131 2.550000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G527800 chr5A 688241473 688245452 3979 False 7350.000000 7350 100.000000 1 3980 1 chr5A.!!$F2 3979
1 TraesCS5A01G527800 chr5A 609822090 609823428 1338 True 851.000000 1194 90.951000 1736 3112 2 chr5A.!!$R3 1376
2 TraesCS5A01G527800 chr5A 680364641 680365919 1278 False 438.000000 645 86.606000 2425 3600 2 chr5A.!!$F3 1175
3 TraesCS5A01G527800 chr5A 688154891 688155718 827 False 432.000000 645 87.013500 1 667 2 chr5A.!!$F4 666
4 TraesCS5A01G527800 chr4D 503665884 503671416 5532 False 786.800000 2050 87.759600 921 3980 5 chr4D.!!$F3 3059
5 TraesCS5A01G527800 chr4D 503639118 503640283 1165 False 411.000000 652 91.329333 1004 2665 3 chr4D.!!$F2 1661
6 TraesCS5A01G527800 chr4B 649490198 649492812 2614 False 871.333333 1934 87.042000 713 3221 3 chr4B.!!$F1 2508
7 TraesCS5A01G527800 chr4B 649516841 649517499 658 False 262.000000 359 83.393500 3228 3827 2 chr4B.!!$F2 599
8 TraesCS5A01G527800 chr7A 113795364 113796699 1335 False 837.000000 1171 90.562000 1738 3112 2 chr7A.!!$F3 1374
9 TraesCS5A01G527800 chr7A 672597678 672599040 1362 True 829.500000 1186 89.421500 1736 3133 2 chr7A.!!$R2 1397
10 TraesCS5A01G527800 chr7A 674114863 674116071 1208 True 746.500000 1007 90.274500 1860 3112 2 chr7A.!!$R3 1252
11 TraesCS5A01G527800 chr4A 17245231 17246600 1369 False 832.500000 1186 89.508000 1736 3133 2 chr4A.!!$F1 1397
12 TraesCS5A01G527800 chr3A 697520553 697521880 1327 False 837.000000 1160 90.747500 1736 3112 2 chr3A.!!$F4 1376
13 TraesCS5A01G527800 chr1B 117289652 117290240 588 True 789.000000 789 91.171000 1736 2313 1 chr1B.!!$R1 577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 67 0.106819 GGCAGGAGCACATGGAAGAT 60.107 55.0 0.00 0.0 44.61 2.40 F
633 797 0.108992 TGTTAGGTGCGCGTTAGAGG 60.109 55.0 8.43 0.0 0.00 3.69 F
1443 3123 0.035820 GTCGGCCACCCACTTCATTA 60.036 55.0 2.24 0.0 0.00 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1086 2584 1.154225 GAAAGCGGAACACATGGCG 60.154 57.895 0.00 0.0 0.0 5.69 R
1597 3277 2.543848 CGAGTTTCTAGTGCTGCAAACA 59.456 45.455 2.77 0.0 32.2 2.83 R
3161 4972 1.176527 CCTATTAATGCATGGCCCCG 58.823 55.000 0.00 0.0 0.0 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 67 0.106819 GGCAGGAGCACATGGAAGAT 60.107 55.000 0.00 0.00 44.61 2.40
72 74 3.326006 GGAGCACATGGAAGATCCTATGA 59.674 47.826 10.84 0.00 37.46 2.15
103 105 3.791076 GGGGGAGAGGGGATGGGA 61.791 72.222 0.00 0.00 0.00 4.37
106 108 1.460497 GGGAGAGGGGATGGGAGAC 60.460 68.421 0.00 0.00 0.00 3.36
112 114 1.768077 GGGGATGGGAGACTGAGGG 60.768 68.421 0.00 0.00 0.00 4.30
129 131 1.228737 GGAGAGAGGAGGGATCCGG 60.229 68.421 5.45 0.00 34.28 5.14
166 168 5.221204 GGACTTCACCTACCTCGTATTTAGG 60.221 48.000 0.00 0.00 38.73 2.69
173 332 4.153835 CCTACCTCGTATTTAGGAGTAGCG 59.846 50.000 0.00 0.00 37.57 4.26
242 401 1.033746 ACCCGCGCTACTAGTAAGCA 61.034 55.000 22.19 0.00 0.00 3.91
265 424 7.292591 AGCATCTACCTATAAGCTTTTCCCTAA 59.707 37.037 3.20 0.00 0.00 2.69
340 504 3.027533 ATGGCCTACATGGACCAGT 57.972 52.632 3.32 1.04 45.70 4.00
341 505 1.298953 ATGGCCTACATGGACCAGTT 58.701 50.000 3.32 0.00 45.70 3.16
343 507 0.462047 GGCCTACATGGACCAGTTCG 60.462 60.000 0.00 0.00 38.13 3.95
344 508 0.535335 GCCTACATGGACCAGTTCGA 59.465 55.000 0.00 0.00 38.35 3.71
345 509 1.066430 GCCTACATGGACCAGTTCGAA 60.066 52.381 0.00 0.00 38.35 3.71
346 510 2.618053 CCTACATGGACCAGTTCGAAC 58.382 52.381 20.71 20.71 38.35 3.95
348 512 0.391597 ACATGGACCAGTTCGAACGT 59.608 50.000 21.87 14.91 0.00 3.99
349 513 0.790207 CATGGACCAGTTCGAACGTG 59.210 55.000 21.87 18.38 0.00 4.49
350 514 0.677288 ATGGACCAGTTCGAACGTGA 59.323 50.000 21.87 5.44 0.00 4.35
352 516 1.273455 GGACCAGTTCGAACGTGACG 61.273 60.000 21.87 2.24 0.00 4.35
357 521 3.926497 TTCGAACGTGACGAAGCC 58.074 55.556 21.02 0.00 43.19 4.35
358 522 1.361271 TTCGAACGTGACGAAGCCT 59.639 52.632 21.02 0.00 43.19 4.58
359 523 0.937699 TTCGAACGTGACGAAGCCTG 60.938 55.000 21.02 0.00 43.19 4.85
361 525 3.000080 GAACGTGACGAAGCCTGCG 62.000 63.158 13.70 0.00 0.00 5.18
362 526 3.493830 AACGTGACGAAGCCTGCGA 62.494 57.895 13.70 0.00 0.00 5.10
364 528 3.470567 GTGACGAAGCCTGCGACG 61.471 66.667 0.00 8.77 0.00 5.12
365 529 4.717629 TGACGAAGCCTGCGACGG 62.718 66.667 0.00 0.00 0.00 4.79
366 530 4.415332 GACGAAGCCTGCGACGGA 62.415 66.667 0.00 0.00 0.00 4.69
367 531 4.421479 ACGAAGCCTGCGACGGAG 62.421 66.667 9.71 9.71 0.00 4.63
369 533 4.443266 GAAGCCTGCGACGGAGCT 62.443 66.667 11.32 9.01 38.13 4.09
370 534 4.443266 AAGCCTGCGACGGAGCTC 62.443 66.667 11.32 4.71 38.13 4.09
434 598 3.181967 GCGTAGGCTGACAGCACG 61.182 66.667 27.07 27.07 44.75 5.34
435 599 2.566529 CGTAGGCTGACAGCACGA 59.433 61.111 27.28 12.86 44.75 4.35
436 600 1.801913 CGTAGGCTGACAGCACGAC 60.802 63.158 27.28 20.54 44.75 4.34
437 601 1.587054 GTAGGCTGACAGCACGACT 59.413 57.895 27.87 17.63 44.75 4.18
471 635 4.247380 GCGGGGAGCTCATGGGAG 62.247 72.222 17.19 1.40 44.04 4.30
472 636 3.554342 CGGGGAGCTCATGGGAGG 61.554 72.222 17.19 0.00 41.67 4.30
473 637 3.883549 GGGGAGCTCATGGGAGGC 61.884 72.222 17.19 0.00 41.67 4.70
474 638 3.883549 GGGAGCTCATGGGAGGCC 61.884 72.222 17.19 0.00 41.67 5.19
475 639 3.883549 GGAGCTCATGGGAGGCCC 61.884 72.222 17.19 0.00 45.71 5.80
484 648 3.319198 GGGAGGCCCGACAACTGA 61.319 66.667 0.00 0.00 32.13 3.41
485 649 2.266055 GGAGGCCCGACAACTGAG 59.734 66.667 0.00 0.00 0.00 3.35
486 650 2.435059 GAGGCCCGACAACTGAGC 60.435 66.667 0.00 0.00 0.00 4.26
491 655 3.114616 CCGACAACTGAGCGCAGG 61.115 66.667 21.93 7.27 46.60 4.85
492 656 2.049156 CGACAACTGAGCGCAGGA 60.049 61.111 21.93 0.00 46.60 3.86
493 657 2.091112 CGACAACTGAGCGCAGGAG 61.091 63.158 21.93 15.04 46.60 3.69
494 658 1.005630 GACAACTGAGCGCAGGAGT 60.006 57.895 21.93 18.07 46.60 3.85
495 659 0.243907 GACAACTGAGCGCAGGAGTA 59.756 55.000 21.93 0.00 46.60 2.59
496 660 0.244994 ACAACTGAGCGCAGGAGTAG 59.755 55.000 21.93 8.56 46.60 2.57
498 662 1.536073 AACTGAGCGCAGGAGTAGCA 61.536 55.000 21.93 0.00 46.60 3.49
499 663 1.226916 CTGAGCGCAGGAGTAGCAG 60.227 63.158 11.47 0.00 38.51 4.24
501 665 3.438017 GAGCGCAGGAGTAGCAGGG 62.438 68.421 11.47 0.00 0.00 4.45
502 666 4.537433 GCGCAGGAGTAGCAGGGG 62.537 72.222 0.30 0.00 0.00 4.79
503 667 3.854669 CGCAGGAGTAGCAGGGGG 61.855 72.222 0.00 0.00 0.00 5.40
504 668 2.365635 GCAGGAGTAGCAGGGGGA 60.366 66.667 0.00 0.00 0.00 4.81
506 670 1.764054 CAGGAGTAGCAGGGGGAGG 60.764 68.421 0.00 0.00 0.00 4.30
507 671 3.164977 GGAGTAGCAGGGGGAGGC 61.165 72.222 0.00 0.00 0.00 4.70
508 672 3.541713 GAGTAGCAGGGGGAGGCG 61.542 72.222 0.00 0.00 34.54 5.52
509 673 4.075793 AGTAGCAGGGGGAGGCGA 62.076 66.667 0.00 0.00 34.54 5.54
510 674 3.541713 GTAGCAGGGGGAGGCGAG 61.542 72.222 0.00 0.00 34.54 5.03
511 675 3.751018 TAGCAGGGGGAGGCGAGA 61.751 66.667 0.00 0.00 34.54 4.04
512 676 3.740495 TAGCAGGGGGAGGCGAGAG 62.740 68.421 0.00 0.00 34.54 3.20
514 678 4.787280 CAGGGGGAGGCGAGAGGT 62.787 72.222 0.00 0.00 0.00 3.85
518 682 2.997897 GGGAGGCGAGAGGTGTGT 60.998 66.667 0.00 0.00 0.00 3.72
519 683 2.262915 GGAGGCGAGAGGTGTGTG 59.737 66.667 0.00 0.00 0.00 3.82
520 684 2.276116 GGAGGCGAGAGGTGTGTGA 61.276 63.158 0.00 0.00 0.00 3.58
521 685 1.214062 GAGGCGAGAGGTGTGTGAG 59.786 63.158 0.00 0.00 0.00 3.51
522 686 1.228583 AGGCGAGAGGTGTGTGAGA 60.229 57.895 0.00 0.00 0.00 3.27
523 687 0.613292 AGGCGAGAGGTGTGTGAGAT 60.613 55.000 0.00 0.00 0.00 2.75
524 688 0.247736 GGCGAGAGGTGTGTGAGATT 59.752 55.000 0.00 0.00 0.00 2.40
525 689 1.338200 GGCGAGAGGTGTGTGAGATTT 60.338 52.381 0.00 0.00 0.00 2.17
528 692 3.994392 GCGAGAGGTGTGTGAGATTTTTA 59.006 43.478 0.00 0.00 0.00 1.52
531 695 5.696724 CGAGAGGTGTGTGAGATTTTTACTT 59.303 40.000 0.00 0.00 0.00 2.24
533 697 5.696724 AGAGGTGTGTGAGATTTTTACTTCG 59.303 40.000 0.00 0.00 0.00 3.79
534 698 5.365619 AGGTGTGTGAGATTTTTACTTCGT 58.634 37.500 0.00 0.00 0.00 3.85
535 699 5.236478 AGGTGTGTGAGATTTTTACTTCGTG 59.764 40.000 0.00 0.00 0.00 4.35
536 700 4.904154 GTGTGTGAGATTTTTACTTCGTGC 59.096 41.667 0.00 0.00 0.00 5.34
537 701 4.024387 TGTGTGAGATTTTTACTTCGTGCC 60.024 41.667 0.00 0.00 0.00 5.01
538 702 4.024387 GTGTGAGATTTTTACTTCGTGCCA 60.024 41.667 0.00 0.00 0.00 4.92
539 703 4.213270 TGTGAGATTTTTACTTCGTGCCAG 59.787 41.667 0.00 0.00 0.00 4.85
540 704 4.451096 GTGAGATTTTTACTTCGTGCCAGA 59.549 41.667 0.00 0.00 0.00 3.86
541 705 4.690748 TGAGATTTTTACTTCGTGCCAGAG 59.309 41.667 0.00 0.00 0.00 3.35
542 706 3.437049 AGATTTTTACTTCGTGCCAGAGC 59.563 43.478 0.00 0.00 40.48 4.09
543 707 1.144969 TTTTACTTCGTGCCAGAGCG 58.855 50.000 0.00 0.00 44.31 5.03
546 710 1.812686 TACTTCGTGCCAGAGCGGTT 61.813 55.000 0.00 0.00 44.31 4.44
548 712 3.158537 TTCGTGCCAGAGCGGTTGA 62.159 57.895 0.00 0.00 44.31 3.18
551 715 1.292223 GTGCCAGAGCGGTTGAGTA 59.708 57.895 0.00 0.00 44.31 2.59
552 716 0.320421 GTGCCAGAGCGGTTGAGTAA 60.320 55.000 0.00 0.00 44.31 2.24
553 717 0.394938 TGCCAGAGCGGTTGAGTAAA 59.605 50.000 0.00 0.00 44.31 2.01
554 718 1.202710 TGCCAGAGCGGTTGAGTAAAA 60.203 47.619 0.00 0.00 44.31 1.52
555 719 1.197036 GCCAGAGCGGTTGAGTAAAAC 59.803 52.381 0.00 0.00 36.97 2.43
556 720 2.767505 CCAGAGCGGTTGAGTAAAACT 58.232 47.619 0.00 0.00 0.00 2.66
557 721 3.863400 GCCAGAGCGGTTGAGTAAAACTA 60.863 47.826 0.00 0.00 36.97 2.24
558 722 4.312443 CCAGAGCGGTTGAGTAAAACTAA 58.688 43.478 0.00 0.00 0.00 2.24
559 723 4.389077 CCAGAGCGGTTGAGTAAAACTAAG 59.611 45.833 0.00 0.00 0.00 2.18
560 724 4.389077 CAGAGCGGTTGAGTAAAACTAAGG 59.611 45.833 0.00 0.00 0.00 2.69
561 725 4.282703 AGAGCGGTTGAGTAAAACTAAGGA 59.717 41.667 0.00 0.00 0.00 3.36
563 727 4.995487 AGCGGTTGAGTAAAACTAAGGAAG 59.005 41.667 0.00 0.00 0.00 3.46
564 728 4.153655 GCGGTTGAGTAAAACTAAGGAAGG 59.846 45.833 0.00 0.00 0.00 3.46
565 729 4.694037 CGGTTGAGTAAAACTAAGGAAGGG 59.306 45.833 0.00 0.00 0.00 3.95
566 730 5.511888 CGGTTGAGTAAAACTAAGGAAGGGA 60.512 44.000 0.00 0.00 0.00 4.20
568 732 7.580109 CGGTTGAGTAAAACTAAGGAAGGGATA 60.580 40.741 0.00 0.00 0.00 2.59
569 733 8.105197 GGTTGAGTAAAACTAAGGAAGGGATAA 58.895 37.037 0.00 0.00 0.00 1.75
570 734 9.163899 GTTGAGTAAAACTAAGGAAGGGATAAG 57.836 37.037 0.00 0.00 0.00 1.73
571 735 7.858498 TGAGTAAAACTAAGGAAGGGATAAGG 58.142 38.462 0.00 0.00 0.00 2.69
572 736 7.092578 TGAGTAAAACTAAGGAAGGGATAAGGG 60.093 40.741 0.00 0.00 0.00 3.95
573 737 6.739042 AGTAAAACTAAGGAAGGGATAAGGGT 59.261 38.462 0.00 0.00 0.00 4.34
574 738 5.712084 AAACTAAGGAAGGGATAAGGGTC 57.288 43.478 0.00 0.00 0.00 4.46
575 739 4.363546 ACTAAGGAAGGGATAAGGGTCA 57.636 45.455 0.00 0.00 0.00 4.02
576 740 4.299485 ACTAAGGAAGGGATAAGGGTCAG 58.701 47.826 0.00 0.00 0.00 3.51
580 744 3.536434 AGGAAGGGATAAGGGTCAGAGTA 59.464 47.826 0.00 0.00 0.00 2.59
582 746 5.378985 AGGAAGGGATAAGGGTCAGAGTATA 59.621 44.000 0.00 0.00 0.00 1.47
583 747 6.082707 GGAAGGGATAAGGGTCAGAGTATAA 58.917 44.000 0.00 0.00 0.00 0.98
585 749 7.237887 GGAAGGGATAAGGGTCAGAGTATAAAT 59.762 40.741 0.00 0.00 0.00 1.40
587 751 8.582891 AGGGATAAGGGTCAGAGTATAAATTT 57.417 34.615 0.00 0.00 0.00 1.82
588 752 9.015146 AGGGATAAGGGTCAGAGTATAAATTTT 57.985 33.333 0.00 0.00 0.00 1.82
614 778 4.345859 TTTTACGGCGGATTATGGATCT 57.654 40.909 13.24 0.00 35.02 2.75
615 779 3.313012 TTACGGCGGATTATGGATCTG 57.687 47.619 13.24 0.00 42.95 2.90
616 780 1.048601 ACGGCGGATTATGGATCTGT 58.951 50.000 13.24 0.00 42.21 3.41
618 782 2.631062 ACGGCGGATTATGGATCTGTTA 59.369 45.455 13.24 0.00 42.21 2.41
620 784 3.600388 GGCGGATTATGGATCTGTTAGG 58.400 50.000 0.00 0.00 42.21 2.69
622 786 3.997021 GCGGATTATGGATCTGTTAGGTG 59.003 47.826 0.00 0.00 42.21 4.00
623 787 3.997021 CGGATTATGGATCTGTTAGGTGC 59.003 47.826 0.00 0.00 36.55 5.01
624 788 3.997021 GGATTATGGATCTGTTAGGTGCG 59.003 47.826 0.00 0.00 35.02 5.34
626 790 0.530650 ATGGATCTGTTAGGTGCGCG 60.531 55.000 0.00 0.00 0.00 6.86
627 791 1.153628 GGATCTGTTAGGTGCGCGT 60.154 57.895 8.43 0.00 0.00 6.01
628 792 0.739813 GGATCTGTTAGGTGCGCGTT 60.740 55.000 8.43 0.00 0.00 4.84
629 793 1.470285 GGATCTGTTAGGTGCGCGTTA 60.470 52.381 8.43 0.00 0.00 3.18
630 794 1.852895 GATCTGTTAGGTGCGCGTTAG 59.147 52.381 8.43 0.00 0.00 2.34
631 795 0.883153 TCTGTTAGGTGCGCGTTAGA 59.117 50.000 8.43 0.00 0.00 2.10
633 797 0.108992 TGTTAGGTGCGCGTTAGAGG 60.109 55.000 8.43 0.00 0.00 3.69
635 799 0.454600 TTAGGTGCGCGTTAGAGGAG 59.545 55.000 8.43 0.00 0.00 3.69
636 800 0.679002 TAGGTGCGCGTTAGAGGAGT 60.679 55.000 8.43 0.00 0.00 3.85
638 802 0.171903 GGTGCGCGTTAGAGGAGTAA 59.828 55.000 8.43 0.00 0.00 2.24
639 803 1.403249 GGTGCGCGTTAGAGGAGTAAA 60.403 52.381 8.43 0.00 0.00 2.01
641 805 2.091744 GTGCGCGTTAGAGGAGTAAAAC 59.908 50.000 8.43 0.00 0.00 2.43
642 806 1.657594 GCGCGTTAGAGGAGTAAAACC 59.342 52.381 8.43 0.00 0.00 3.27
643 807 2.927871 GCGCGTTAGAGGAGTAAAACCA 60.928 50.000 8.43 0.00 0.00 3.67
644 808 3.319755 CGCGTTAGAGGAGTAAAACCAA 58.680 45.455 0.00 0.00 0.00 3.67
645 809 3.930848 CGCGTTAGAGGAGTAAAACCAAT 59.069 43.478 0.00 0.00 0.00 3.16
646 810 4.390909 CGCGTTAGAGGAGTAAAACCAATT 59.609 41.667 0.00 0.00 0.00 2.32
649 813 7.143340 GCGTTAGAGGAGTAAAACCAATTTTT 58.857 34.615 0.00 0.00 38.91 1.94
667 831 3.688694 TTTTACTCCTTTAGCGCTGGA 57.311 42.857 22.90 17.62 0.00 3.86
668 832 3.906720 TTTACTCCTTTAGCGCTGGAT 57.093 42.857 22.90 10.65 0.00 3.41
669 833 5.347620 TTTTACTCCTTTAGCGCTGGATA 57.652 39.130 22.90 9.72 0.00 2.59
670 834 4.585955 TTACTCCTTTAGCGCTGGATAG 57.414 45.455 22.90 13.15 0.00 2.08
671 835 1.689273 ACTCCTTTAGCGCTGGATAGG 59.311 52.381 22.90 19.57 0.00 2.57
672 836 1.001406 CTCCTTTAGCGCTGGATAGGG 59.999 57.143 22.90 12.36 39.68 3.53
673 837 1.048601 CCTTTAGCGCTGGATAGGGA 58.951 55.000 22.90 0.00 39.07 4.20
674 838 1.625818 CCTTTAGCGCTGGATAGGGAT 59.374 52.381 22.90 0.00 39.07 3.85
675 839 2.039084 CCTTTAGCGCTGGATAGGGATT 59.961 50.000 22.90 0.00 39.07 3.01
676 840 3.330267 CTTTAGCGCTGGATAGGGATTC 58.670 50.000 22.90 0.00 39.07 2.52
677 841 1.267121 TAGCGCTGGATAGGGATTCC 58.733 55.000 22.90 0.00 39.07 3.01
678 842 1.374758 GCGCTGGATAGGGATTCCG 60.375 63.158 0.00 0.00 39.07 4.30
679 843 2.050269 CGCTGGATAGGGATTCCGT 58.950 57.895 3.02 3.02 39.07 4.69
680 844 1.254026 CGCTGGATAGGGATTCCGTA 58.746 55.000 7.53 7.53 39.07 4.02
681 845 1.616865 CGCTGGATAGGGATTCCGTAA 59.383 52.381 9.07 0.00 39.07 3.18
682 846 2.352814 CGCTGGATAGGGATTCCGTAAG 60.353 54.545 9.07 4.18 39.07 2.34
683 847 2.897969 GCTGGATAGGGATTCCGTAAGA 59.102 50.000 9.07 0.00 43.02 2.10
685 849 4.202326 GCTGGATAGGGATTCCGTAAGAAA 60.202 45.833 9.07 0.00 38.21 2.52
686 850 5.513267 GCTGGATAGGGATTCCGTAAGAAAT 60.513 44.000 9.07 0.00 38.21 2.17
687 851 5.865085 TGGATAGGGATTCCGTAAGAAATG 58.135 41.667 9.07 0.00 38.21 2.32
688 852 4.695928 GGATAGGGATTCCGTAAGAAATGC 59.304 45.833 9.07 0.00 38.21 3.56
689 853 2.932261 AGGGATTCCGTAAGAAATGCC 58.068 47.619 0.00 0.00 38.21 4.40
692 856 2.681344 GGATTCCGTAAGAAATGCCGTT 59.319 45.455 0.00 0.00 38.21 4.44
694 858 1.444836 TCCGTAAGAAATGCCGTTGG 58.555 50.000 0.00 0.00 43.02 3.77
695 859 0.450184 CCGTAAGAAATGCCGTTGGG 59.550 55.000 0.00 0.00 43.02 4.12
697 861 1.538075 CGTAAGAAATGCCGTTGGGTT 59.462 47.619 0.00 0.00 43.02 4.11
698 862 2.743126 CGTAAGAAATGCCGTTGGGTTA 59.257 45.455 0.00 0.00 43.02 2.85
699 863 3.188873 CGTAAGAAATGCCGTTGGGTTAA 59.811 43.478 0.00 0.00 43.02 2.01
700 864 4.142556 CGTAAGAAATGCCGTTGGGTTAAT 60.143 41.667 0.00 0.00 43.02 1.40
701 865 3.866883 AGAAATGCCGTTGGGTTAATG 57.133 42.857 0.00 0.00 34.97 1.90
702 866 3.161866 AGAAATGCCGTTGGGTTAATGT 58.838 40.909 0.00 0.00 34.97 2.71
705 869 4.911514 AATGCCGTTGGGTTAATGTATC 57.088 40.909 0.00 0.00 34.97 2.24
707 871 2.093606 TGCCGTTGGGTTAATGTATCGA 60.094 45.455 0.00 0.00 34.97 3.59
709 873 3.059188 GCCGTTGGGTTAATGTATCGATG 60.059 47.826 8.54 0.00 34.97 3.84
710 874 3.059188 CCGTTGGGTTAATGTATCGATGC 60.059 47.826 8.54 7.48 0.00 3.91
747 911 0.250597 ACTCCACCGTAGCCAAAACC 60.251 55.000 0.00 0.00 0.00 3.27
766 930 1.670811 CCGGCAAAGCACGATATTTCT 59.329 47.619 0.00 0.00 0.00 2.52
774 938 6.966632 GCAAAGCACGATATTTCTTCAACATA 59.033 34.615 0.00 0.00 0.00 2.29
782 946 7.280205 ACGATATTTCTTCAACATAGGTTCACC 59.720 37.037 0.00 0.00 34.21 4.02
785 949 5.825593 TTCTTCAACATAGGTTCACCTCT 57.174 39.130 0.39 0.00 44.77 3.69
808 972 2.355412 CCATCTCATCTCACACAAGCCA 60.355 50.000 0.00 0.00 0.00 4.75
809 973 2.756840 TCTCATCTCACACAAGCCAG 57.243 50.000 0.00 0.00 0.00 4.85
810 974 1.973515 TCTCATCTCACACAAGCCAGT 59.026 47.619 0.00 0.00 0.00 4.00
815 979 0.309922 CTCACACAAGCCAGTTGCAG 59.690 55.000 0.00 0.00 44.83 4.41
868 1049 0.255890 ATCACCTTTCCCATCCCACG 59.744 55.000 0.00 0.00 0.00 4.94
870 1051 2.824041 CCTTTCCCATCCCACGCG 60.824 66.667 3.53 3.53 0.00 6.01
909 1090 1.227674 CTACAGATTCTGCCCGGCC 60.228 63.158 13.64 0.00 34.37 6.13
910 1091 2.978452 CTACAGATTCTGCCCGGCCG 62.978 65.000 21.04 21.04 34.37 6.13
945 2438 2.101582 CCTCTCCATCGATCGGTTTCTT 59.898 50.000 16.41 0.00 0.00 2.52
964 2462 2.203640 ACCTCACACCTCTCCGCA 60.204 61.111 0.00 0.00 0.00 5.69
965 2463 2.279069 ACCTCACACCTCTCCGCAG 61.279 63.158 0.00 0.00 0.00 5.18
966 2464 1.979155 CCTCACACCTCTCCGCAGA 60.979 63.158 0.00 0.00 0.00 4.26
967 2465 1.510383 CTCACACCTCTCCGCAGAG 59.490 63.158 0.00 0.00 45.44 3.35
968 2466 2.125753 CACACCTCTCCGCAGAGC 60.126 66.667 0.00 0.00 44.61 4.09
969 2467 2.601666 ACACCTCTCCGCAGAGCA 60.602 61.111 0.00 0.00 44.61 4.26
984 2482 3.397439 GCAGAGCAGAGCCCAGGA 61.397 66.667 0.00 0.00 0.00 3.86
989 2487 1.970352 GAGCAGAGCCCAGGAAGAGG 61.970 65.000 0.00 0.00 0.00 3.69
995 2493 3.415087 CCCAGGAAGAGGCAGGGG 61.415 72.222 0.00 0.00 35.83 4.79
996 2494 2.612115 CCAGGAAGAGGCAGGGGT 60.612 66.667 0.00 0.00 0.00 4.95
997 2495 2.234296 CCAGGAAGAGGCAGGGGTT 61.234 63.158 0.00 0.00 0.00 4.11
998 2496 1.301293 CAGGAAGAGGCAGGGGTTC 59.699 63.158 0.00 0.00 0.00 3.62
1095 2593 0.107508 CATCTTCCCTCGCCATGTGT 60.108 55.000 0.00 0.00 0.00 3.72
1228 2767 5.128008 TGGGTCTTTCAAGGTTTTGGTTAAG 59.872 40.000 0.00 0.00 34.97 1.85
1278 2820 8.167392 TCAAGAGTAATTTTGGGGAGTTTCATA 58.833 33.333 0.00 0.00 0.00 2.15
1297 2839 2.584835 ACACAAAAGGCTAGATGGCA 57.415 45.000 0.00 0.00 44.55 4.92
1301 2843 1.959282 CAAAAGGCTAGATGGCATCCC 59.041 52.381 23.33 17.11 44.55 3.85
1302 2844 0.480252 AAAGGCTAGATGGCATCCCC 59.520 55.000 23.33 19.73 44.55 4.81
1325 2869 6.927381 CCCGTCGAATACTATACATTTCCTTT 59.073 38.462 0.00 0.00 0.00 3.11
1354 2931 7.467623 GTCATGACATGGATTGACTTCTTAAC 58.532 38.462 21.07 0.00 36.43 2.01
1355 2932 7.335422 GTCATGACATGGATTGACTTCTTAACT 59.665 37.037 21.07 0.00 36.43 2.24
1356 2933 8.539544 TCATGACATGGATTGACTTCTTAACTA 58.460 33.333 15.37 0.00 0.00 2.24
1407 3036 0.613777 AGTAGGAGGCCTCGTTTTGG 59.386 55.000 31.44 0.00 34.61 3.28
1429 3109 1.435577 AACGTATTTGTCCAGTCGGC 58.564 50.000 0.00 0.00 0.00 5.54
1437 3117 4.954118 TCCAGTCGGCCACCCACT 62.954 66.667 2.24 0.00 0.00 4.00
1439 3119 2.358737 CAGTCGGCCACCCACTTC 60.359 66.667 2.24 0.00 0.00 3.01
1440 3120 2.847234 AGTCGGCCACCCACTTCA 60.847 61.111 2.24 0.00 0.00 3.02
1441 3121 2.224159 AGTCGGCCACCCACTTCAT 61.224 57.895 2.24 0.00 0.00 2.57
1442 3122 1.303317 GTCGGCCACCCACTTCATT 60.303 57.895 2.24 0.00 0.00 2.57
1443 3123 0.035820 GTCGGCCACCCACTTCATTA 60.036 55.000 2.24 0.00 0.00 1.90
1444 3124 0.251916 TCGGCCACCCACTTCATTAG 59.748 55.000 2.24 0.00 0.00 1.73
1445 3125 0.748005 CGGCCACCCACTTCATTAGG 60.748 60.000 2.24 0.00 0.00 2.69
1446 3126 0.331616 GGCCACCCACTTCATTAGGT 59.668 55.000 0.00 0.00 0.00 3.08
1453 3133 5.373812 ACCCACTTCATTAGGTGATTAGG 57.626 43.478 0.00 0.00 36.54 2.69
1454 3134 4.788617 ACCCACTTCATTAGGTGATTAGGT 59.211 41.667 0.00 0.00 36.54 3.08
1455 3135 5.126067 CCCACTTCATTAGGTGATTAGGTG 58.874 45.833 0.00 0.00 36.54 4.00
1456 3136 5.104527 CCCACTTCATTAGGTGATTAGGTGA 60.105 44.000 0.00 0.00 36.54 4.02
1457 3137 6.409695 CCCACTTCATTAGGTGATTAGGTGAT 60.410 42.308 0.00 0.00 36.54 3.06
1458 3138 7.056635 CCACTTCATTAGGTGATTAGGTGATT 58.943 38.462 0.00 0.00 36.54 2.57
1459 3139 7.557719 CCACTTCATTAGGTGATTAGGTGATTT 59.442 37.037 0.00 0.00 36.54 2.17
1460 3140 8.616076 CACTTCATTAGGTGATTAGGTGATTTC 58.384 37.037 0.00 0.00 36.54 2.17
1461 3141 7.775561 ACTTCATTAGGTGATTAGGTGATTTCC 59.224 37.037 0.00 0.00 36.54 3.13
1462 3142 7.451731 TCATTAGGTGATTAGGTGATTTCCT 57.548 36.000 0.00 0.00 41.20 3.36
1463 3143 8.561536 TCATTAGGTGATTAGGTGATTTCCTA 57.438 34.615 0.00 0.00 38.86 2.94
1464 3144 8.651389 TCATTAGGTGATTAGGTGATTTCCTAG 58.349 37.037 0.00 0.00 40.58 3.02
1465 3145 7.989947 TTAGGTGATTAGGTGATTTCCTAGT 57.010 36.000 0.00 0.00 40.58 2.57
1466 3146 6.893020 AGGTGATTAGGTGATTTCCTAGTT 57.107 37.500 0.00 0.00 40.58 2.24
1467 3147 6.890293 AGGTGATTAGGTGATTTCCTAGTTC 58.110 40.000 0.00 0.00 40.58 3.01
1468 3148 6.443849 AGGTGATTAGGTGATTTCCTAGTTCA 59.556 38.462 0.00 0.00 40.58 3.18
1469 3149 7.037586 AGGTGATTAGGTGATTTCCTAGTTCAA 60.038 37.037 0.00 0.00 40.58 2.69
1470 3150 7.281100 GGTGATTAGGTGATTTCCTAGTTCAAG 59.719 40.741 0.00 0.00 40.58 3.02
1471 3151 7.824779 GTGATTAGGTGATTTCCTAGTTCAAGT 59.175 37.037 0.00 0.00 40.58 3.16
1472 3152 8.383175 TGATTAGGTGATTTCCTAGTTCAAGTT 58.617 33.333 0.00 0.00 40.58 2.66
1473 3153 8.794335 ATTAGGTGATTTCCTAGTTCAAGTTC 57.206 34.615 0.00 0.00 40.58 3.01
1474 3154 6.441088 AGGTGATTTCCTAGTTCAAGTTCT 57.559 37.500 0.00 0.00 35.87 3.01
1475 3155 7.554959 AGGTGATTTCCTAGTTCAAGTTCTA 57.445 36.000 0.00 0.00 35.87 2.10
1480 3160 9.924650 TGATTTCCTAGTTCAAGTTCTAAGTAC 57.075 33.333 0.00 0.00 0.00 2.73
1501 3181 3.908103 ACTAAATATATGGCCTCACCGGT 59.092 43.478 0.00 0.00 43.94 5.28
1507 3187 0.322187 ATGGCCTCACCGGTACAAAC 60.322 55.000 6.87 0.00 43.94 2.93
1514 3194 3.061322 CTCACCGGTACAAACGAAATGA 58.939 45.455 6.87 0.00 0.00 2.57
1547 3227 6.743575 AGGTGATTTCCTAATTCAAGTTCG 57.256 37.500 0.00 0.00 35.87 3.95
1571 3251 9.096160 TCGAAGAGTGTTTATGTAGTAGTAGAG 57.904 37.037 0.00 0.00 0.00 2.43
1588 3268 8.529476 AGTAGTAGAGTTCGTTCCATTACAAAT 58.471 33.333 0.00 0.00 0.00 2.32
1591 3271 8.718734 AGTAGAGTTCGTTCCATTACAAATTTC 58.281 33.333 0.00 0.00 0.00 2.17
1594 3274 9.226606 AGAGTTCGTTCCATTACAAATTTCATA 57.773 29.630 0.00 0.00 0.00 2.15
1597 3277 7.931578 TCGTTCCATTACAAATTTCATACCT 57.068 32.000 0.00 0.00 0.00 3.08
1611 3291 3.599343 TCATACCTGTTTGCAGCACTAG 58.401 45.455 0.00 0.00 41.26 2.57
1657 3337 2.685850 TCAGTCGTCGATAGTCTGGA 57.314 50.000 14.29 3.76 37.40 3.86
1924 3615 3.525800 AGGAAACATGCAGGTTAGGTT 57.474 42.857 18.21 0.81 0.00 3.50
1942 3633 7.344134 GTTAGGTTATCCTACCAATTGACCTT 58.656 38.462 14.30 2.71 44.96 3.50
1979 3670 3.440173 CCGAGTTAACATTCACTTGGCAT 59.560 43.478 8.61 0.00 37.69 4.40
2227 3934 7.824779 AGTCTTAAATGTCTTGATTACTCCCAC 59.175 37.037 0.00 0.00 0.00 4.61
2264 3971 7.264947 CAGGAGGTTAAGTTTGTTTTGTTGAT 58.735 34.615 0.00 0.00 0.00 2.57
2403 4110 4.869941 AGGGATCTTCATGCCCCT 57.130 55.556 1.98 0.00 41.59 4.79
2442 4149 7.771183 TCTTTGTTATCATTGATTGGGTAAGC 58.229 34.615 4.14 0.00 0.00 3.09
2453 4160 0.397187 TGGGTAAGCCGTGCACTTTA 59.603 50.000 16.19 8.11 34.97 1.85
2573 4283 7.477144 ACGAAAAATGAAATTCAGGAAAACC 57.523 32.000 1.10 0.00 33.67 3.27
2577 4287 3.363341 TGAAATTCAGGAAAACCGCAC 57.637 42.857 0.00 0.00 0.00 5.34
2579 4289 0.966179 AATTCAGGAAAACCGCACCC 59.034 50.000 0.00 0.00 0.00 4.61
2636 4365 9.471084 GAATATAAGACAGCCTTAAAGAGACTC 57.529 37.037 0.00 0.00 40.45 3.36
2645 4378 7.099764 CAGCCTTAAAGAGACTCTTTATCACA 58.900 38.462 29.48 18.02 45.24 3.58
2657 4390 3.447229 TCTTTATCACAGGTGCTCGATCA 59.553 43.478 0.00 0.00 0.00 2.92
2665 4398 1.537202 AGGTGCTCGATCAAACTTTGC 59.463 47.619 0.00 0.00 0.00 3.68
2666 4399 1.401539 GGTGCTCGATCAAACTTTGCC 60.402 52.381 0.00 0.00 0.00 4.52
2667 4400 1.266718 GTGCTCGATCAAACTTTGCCA 59.733 47.619 0.00 0.00 0.00 4.92
2669 4402 2.360483 TGCTCGATCAAACTTTGCCAAA 59.640 40.909 0.00 0.00 0.00 3.28
2705 4441 8.770438 TTTGAGCAAGAAATTTTAACAACTGT 57.230 26.923 0.00 0.00 0.00 3.55
2744 4480 0.036765 TGGTTGACCAGCGGTATGTC 60.037 55.000 0.00 8.95 42.01 3.06
2779 4516 1.210155 GTGAACGCATTGCAGGTCC 59.790 57.895 9.69 1.45 0.00 4.46
2898 4635 1.069973 TGCATTCAGTTCACGCTTTCG 60.070 47.619 0.00 0.00 42.43 3.46
2904 4641 0.878961 AGTTCACGCTTTCGGTCACC 60.879 55.000 0.00 0.00 40.69 4.02
2961 4705 0.674895 CTTTCTCCGGGTTCTGGCTG 60.675 60.000 0.00 0.00 0.00 4.85
2981 4725 3.650139 TGCTGGTTTCGTTCTTCTAGTC 58.350 45.455 0.00 0.00 0.00 2.59
2993 4737 5.352846 CGTTCTTCTAGTCATCTCTCTCACA 59.647 44.000 0.00 0.00 0.00 3.58
3062 4807 3.253230 GGTAAATCAGTTGCAATGTGCC 58.747 45.455 0.59 0.00 44.23 5.01
3116 4865 9.319143 GTACATAGATTGTCTGTTTGATAGCTT 57.681 33.333 0.00 0.00 39.87 3.74
3161 4972 8.552034 GTGGAACAGTTACTATTTAGATGATGC 58.448 37.037 0.00 0.00 41.80 3.91
3165 4976 5.639506 CAGTTACTATTTAGATGATGCGGGG 59.360 44.000 0.00 0.00 0.00 5.73
3170 4981 0.250858 TTAGATGATGCGGGGCCATG 60.251 55.000 4.39 0.00 0.00 3.66
3171 4982 2.753009 TAGATGATGCGGGGCCATGC 62.753 60.000 4.39 9.78 0.00 4.06
3172 4983 4.526348 ATGATGCGGGGCCATGCA 62.526 61.111 22.54 22.54 46.51 3.96
3179 4990 0.527565 GCGGGGCCATGCATTAATAG 59.472 55.000 14.35 0.00 0.00 1.73
3184 4995 3.500289 GGGGCCATGCATTAATAGGAAGA 60.500 47.826 4.39 0.00 0.00 2.87
3258 5098 3.393089 ACTGATCCTGTGACTTGTGAC 57.607 47.619 0.00 0.00 0.00 3.67
3286 5126 4.009675 TGCGCCATGGATTTTATATCTCC 58.990 43.478 18.40 0.00 0.00 3.71
3291 5131 6.128172 CGCCATGGATTTTATATCTCCTCAAC 60.128 42.308 18.40 0.00 0.00 3.18
3292 5132 6.944862 GCCATGGATTTTATATCTCCTCAACT 59.055 38.462 18.40 0.00 0.00 3.16
3294 5134 9.442047 CCATGGATTTTATATCTCCTCAACTAC 57.558 37.037 5.56 0.00 0.00 2.73
3297 5137 9.832445 TGGATTTTATATCTCCTCAACTACAAC 57.168 33.333 0.00 0.00 0.00 3.32
3346 5188 5.635120 AGGAATTTCAGTTTAGTCCTTGCT 58.365 37.500 0.00 0.00 31.31 3.91
3404 5323 1.135972 GCCACACATAACAAGACAGCG 60.136 52.381 0.00 0.00 0.00 5.18
3473 5396 9.817809 AGATTCTCAAGAAAAGTATTATGCGTA 57.182 29.630 0.00 0.00 37.61 4.42
3532 5455 4.046462 GCACATATTTCCGCTACGTAGAA 58.954 43.478 26.53 11.57 0.00 2.10
3545 5468 3.896648 ACGTAGAAAATGTGCCAAGTG 57.103 42.857 0.00 0.00 0.00 3.16
3581 5504 3.056891 TCGGTCAGGCAAAAATTCATTCC 60.057 43.478 0.00 0.00 0.00 3.01
3619 5542 1.327303 GCCCACACATCCAGAAACAA 58.673 50.000 0.00 0.00 0.00 2.83
3621 5544 1.613437 CCCACACATCCAGAAACAACC 59.387 52.381 0.00 0.00 0.00 3.77
3644 5567 1.439353 GGGCCACGACGATACGTAGA 61.439 60.000 4.39 0.00 44.76 2.59
3675 5598 4.454847 CAGAAGCAAGCTGATCTTCTTCAA 59.545 41.667 17.60 0.00 42.60 2.69
3676 5599 5.124138 CAGAAGCAAGCTGATCTTCTTCAAT 59.876 40.000 17.60 1.25 42.60 2.57
3677 5600 5.354792 AGAAGCAAGCTGATCTTCTTCAATC 59.645 40.000 15.54 0.00 42.60 2.67
3678 5601 4.846040 AGCAAGCTGATCTTCTTCAATCT 58.154 39.130 0.00 0.00 31.27 2.40
3679 5602 5.254901 AGCAAGCTGATCTTCTTCAATCTT 58.745 37.500 0.00 0.00 31.27 2.40
3680 5603 5.354792 AGCAAGCTGATCTTCTTCAATCTTC 59.645 40.000 0.00 0.00 31.27 2.87
3681 5604 5.123502 GCAAGCTGATCTTCTTCAATCTTCA 59.876 40.000 0.00 0.00 31.27 3.02
3682 5605 6.544622 CAAGCTGATCTTCTTCAATCTTCAC 58.455 40.000 0.00 0.00 31.27 3.18
3683 5606 4.869297 AGCTGATCTTCTTCAATCTTCACG 59.131 41.667 0.00 0.00 0.00 4.35
3712 5635 1.089920 CTGGAAAGGCATCCACTTCG 58.910 55.000 7.85 0.00 44.52 3.79
3850 5801 0.764890 TTGTTGCTCTAGCCCTGTGT 59.235 50.000 0.00 0.00 41.18 3.72
3871 5822 1.936436 GCATTCATGGCGGCAGTTCA 61.936 55.000 19.29 1.21 0.00 3.18
3880 5831 1.660560 GCGGCAGTTCATTGCATCCT 61.661 55.000 0.00 0.00 45.86 3.24
3913 5864 9.118236 GTAATCACTTTATTTTGTTCTGCTGTC 57.882 33.333 0.00 0.00 0.00 3.51
3919 5870 3.607422 TTTTGTTCTGCTGTCATGTCG 57.393 42.857 0.00 0.00 0.00 4.35
3929 5880 2.228822 GCTGTCATGTCGGAAAAATGGT 59.771 45.455 2.72 0.00 0.00 3.55
3952 5903 7.780745 TGGTGGTTTCTTTAACATAAAGAGGAA 59.219 33.333 11.22 3.74 38.55 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 67 2.576191 CCACCACCCTTTCTTCATAGGA 59.424 50.000 0.00 0.00 33.13 2.94
72 74 3.272017 CCCCCACCACCCTTTCTT 58.728 61.111 0.00 0.00 0.00 2.52
91 93 0.264359 CTCAGTCTCCCATCCCCTCT 59.736 60.000 0.00 0.00 0.00 3.69
94 96 1.768077 CCCTCAGTCTCCCATCCCC 60.768 68.421 0.00 0.00 0.00 4.81
96 98 0.263172 TCTCCCTCAGTCTCCCATCC 59.737 60.000 0.00 0.00 0.00 3.51
97 99 1.216678 TCTCTCCCTCAGTCTCCCATC 59.783 57.143 0.00 0.00 0.00 3.51
98 100 1.217689 CTCTCTCCCTCAGTCTCCCAT 59.782 57.143 0.00 0.00 0.00 4.00
99 101 0.628522 CTCTCTCCCTCAGTCTCCCA 59.371 60.000 0.00 0.00 0.00 4.37
101 103 0.923358 TCCTCTCTCCCTCAGTCTCC 59.077 60.000 0.00 0.00 0.00 3.71
102 104 1.133792 CCTCCTCTCTCCCTCAGTCTC 60.134 61.905 0.00 0.00 0.00 3.36
103 105 0.926293 CCTCCTCTCTCCCTCAGTCT 59.074 60.000 0.00 0.00 0.00 3.24
106 108 0.859760 ATCCCTCCTCTCTCCCTCAG 59.140 60.000 0.00 0.00 0.00 3.35
112 114 1.906333 GCCGGATCCCTCCTCTCTC 60.906 68.421 5.05 0.00 39.65 3.20
129 131 0.321996 GAAGTCCCCATATCCTCGGC 59.678 60.000 0.00 0.00 0.00 5.54
166 168 2.625737 GGTTTTTACCCCTCGCTACTC 58.374 52.381 0.00 0.00 0.00 2.59
265 424 1.406887 GGTGATGTTGCCCGACACTAT 60.407 52.381 0.00 0.00 31.30 2.12
308 472 2.124736 CCATGGCCAGGTACACCG 60.125 66.667 17.55 0.00 42.08 4.94
330 494 0.790207 CACGTTCGAACTGGTCCATG 59.210 55.000 24.80 9.96 0.00 3.66
331 495 0.677288 TCACGTTCGAACTGGTCCAT 59.323 50.000 24.80 1.36 0.00 3.41
332 496 0.249155 GTCACGTTCGAACTGGTCCA 60.249 55.000 24.80 4.00 0.00 4.02
333 497 1.273455 CGTCACGTTCGAACTGGTCC 61.273 60.000 24.80 8.82 0.00 4.46
334 498 0.317269 TCGTCACGTTCGAACTGGTC 60.317 55.000 24.80 13.29 34.36 4.02
336 500 0.776451 CTTCGTCACGTTCGAACTGG 59.224 55.000 24.80 16.49 41.33 4.00
337 501 0.158928 GCTTCGTCACGTTCGAACTG 59.841 55.000 24.80 20.21 41.33 3.16
339 503 0.938168 AGGCTTCGTCACGTTCGAAC 60.938 55.000 18.47 18.47 41.33 3.95
340 504 0.937699 CAGGCTTCGTCACGTTCGAA 60.938 55.000 19.34 19.34 43.41 3.71
341 505 1.371267 CAGGCTTCGTCACGTTCGA 60.371 57.895 8.25 8.25 35.50 3.71
343 507 2.853914 GCAGGCTTCGTCACGTTC 59.146 61.111 0.00 0.00 0.00 3.95
344 508 3.036084 CGCAGGCTTCGTCACGTT 61.036 61.111 0.00 0.00 0.00 3.99
345 509 3.973516 TCGCAGGCTTCGTCACGT 61.974 61.111 6.42 0.00 0.00 4.49
346 510 3.470567 GTCGCAGGCTTCGTCACG 61.471 66.667 6.42 0.00 0.00 4.35
348 512 4.717629 CCGTCGCAGGCTTCGTCA 62.718 66.667 6.42 0.00 0.00 4.35
349 513 4.415332 TCCGTCGCAGGCTTCGTC 62.415 66.667 6.42 0.00 0.00 4.20
350 514 4.421479 CTCCGTCGCAGGCTTCGT 62.421 66.667 6.42 0.00 0.00 3.85
352 516 4.443266 AGCTCCGTCGCAGGCTTC 62.443 66.667 0.00 0.00 0.00 3.86
409 573 4.514577 CAGCCTACGCCACCTCCG 62.515 72.222 0.00 0.00 34.57 4.63
410 574 3.075005 TCAGCCTACGCCACCTCC 61.075 66.667 0.00 0.00 34.57 4.30
411 575 2.184579 GTCAGCCTACGCCACCTC 59.815 66.667 0.00 0.00 34.57 3.85
412 576 2.603473 TGTCAGCCTACGCCACCT 60.603 61.111 0.00 0.00 34.57 4.00
413 577 2.125512 CTGTCAGCCTACGCCACC 60.126 66.667 0.00 0.00 34.57 4.61
414 578 2.815647 GCTGTCAGCCTACGCCAC 60.816 66.667 14.27 0.00 34.48 5.01
416 580 2.815647 GTGCTGTCAGCCTACGCC 60.816 66.667 21.99 0.00 41.51 5.68
417 581 3.181967 CGTGCTGTCAGCCTACGC 61.182 66.667 21.99 6.41 41.51 4.42
418 582 1.801913 GTCGTGCTGTCAGCCTACG 60.802 63.158 24.35 24.35 41.51 3.51
419 583 0.734253 CAGTCGTGCTGTCAGCCTAC 60.734 60.000 21.99 15.94 41.51 3.18
420 584 1.586541 CAGTCGTGCTGTCAGCCTA 59.413 57.895 21.99 1.12 41.51 3.93
422 586 2.740055 CCAGTCGTGCTGTCAGCC 60.740 66.667 21.99 12.11 43.55 4.85
423 587 2.740055 CCCAGTCGTGCTGTCAGC 60.740 66.667 18.32 18.32 43.55 4.26
424 588 2.047844 CCCCAGTCGTGCTGTCAG 60.048 66.667 0.00 0.00 43.55 3.51
427 591 4.320456 CTGCCCCAGTCGTGCTGT 62.320 66.667 8.43 0.00 43.55 4.40
449 613 3.933722 ATGAGCTCCCCGCCATCG 61.934 66.667 12.15 0.00 40.39 3.84
450 614 2.281345 CATGAGCTCCCCGCCATC 60.281 66.667 12.15 0.00 40.39 3.51
451 615 3.882326 CCATGAGCTCCCCGCCAT 61.882 66.667 12.15 0.00 40.39 4.40
455 619 3.554342 CCTCCCATGAGCTCCCCG 61.554 72.222 12.15 0.00 37.29 5.73
456 620 3.883549 GCCTCCCATGAGCTCCCC 61.884 72.222 12.15 0.00 37.29 4.81
459 623 4.247380 CGGGCCTCCCATGAGCTC 62.247 72.222 6.82 6.82 45.83 4.09
460 624 4.804420 TCGGGCCTCCCATGAGCT 62.804 66.667 0.84 0.00 45.83 4.09
461 625 4.554036 GTCGGGCCTCCCATGAGC 62.554 72.222 0.84 0.00 45.83 4.26
462 626 2.669133 TTGTCGGGCCTCCCATGAG 61.669 63.158 0.84 0.00 45.83 2.90
463 627 2.609299 TTGTCGGGCCTCCCATGA 60.609 61.111 0.84 0.00 45.83 3.07
464 628 2.438434 GTTGTCGGGCCTCCCATG 60.438 66.667 0.84 0.00 45.83 3.66
465 629 2.610859 AGTTGTCGGGCCTCCCAT 60.611 61.111 0.84 0.00 45.83 4.00
467 631 3.316573 CTCAGTTGTCGGGCCTCCC 62.317 68.421 0.84 0.00 41.09 4.30
468 632 2.266055 CTCAGTTGTCGGGCCTCC 59.734 66.667 0.84 0.00 0.00 4.30
469 633 2.435059 GCTCAGTTGTCGGGCCTC 60.435 66.667 0.84 0.00 0.00 4.70
470 634 4.379243 CGCTCAGTTGTCGGGCCT 62.379 66.667 0.84 0.00 0.00 5.19
473 637 3.114616 CTGCGCTCAGTTGTCGGG 61.115 66.667 9.73 0.00 35.61 5.14
474 638 3.114616 CCTGCGCTCAGTTGTCGG 61.115 66.667 9.73 0.00 38.66 4.79
475 639 2.049156 TCCTGCGCTCAGTTGTCG 60.049 61.111 9.73 0.00 38.66 4.35
476 640 0.243907 TACTCCTGCGCTCAGTTGTC 59.756 55.000 9.73 0.00 38.66 3.18
477 641 0.244994 CTACTCCTGCGCTCAGTTGT 59.755 55.000 9.73 3.78 38.66 3.32
478 642 1.080995 GCTACTCCTGCGCTCAGTTG 61.081 60.000 9.73 9.71 38.66 3.16
479 643 1.216710 GCTACTCCTGCGCTCAGTT 59.783 57.895 9.73 0.00 38.66 3.16
480 644 1.943116 CTGCTACTCCTGCGCTCAGT 61.943 60.000 9.73 10.28 38.66 3.41
482 646 2.714991 CCTGCTACTCCTGCGCTCA 61.715 63.158 9.73 0.00 0.00 4.26
483 647 2.105930 CCTGCTACTCCTGCGCTC 59.894 66.667 9.73 0.00 0.00 5.03
484 648 3.465403 CCCTGCTACTCCTGCGCT 61.465 66.667 9.73 0.00 0.00 5.92
485 649 4.537433 CCCCTGCTACTCCTGCGC 62.537 72.222 0.00 0.00 0.00 6.09
486 650 3.854669 CCCCCTGCTACTCCTGCG 61.855 72.222 0.00 0.00 0.00 5.18
488 652 1.764054 CCTCCCCCTGCTACTCCTG 60.764 68.421 0.00 0.00 0.00 3.86
489 653 2.699496 CCTCCCCCTGCTACTCCT 59.301 66.667 0.00 0.00 0.00 3.69
491 655 3.541713 CGCCTCCCCCTGCTACTC 61.542 72.222 0.00 0.00 0.00 2.59
492 656 4.075793 TCGCCTCCCCCTGCTACT 62.076 66.667 0.00 0.00 0.00 2.57
493 657 3.541713 CTCGCCTCCCCCTGCTAC 61.542 72.222 0.00 0.00 0.00 3.58
494 658 3.740495 CTCTCGCCTCCCCCTGCTA 62.740 68.421 0.00 0.00 0.00 3.49
498 662 4.787280 CACCTCTCGCCTCCCCCT 62.787 72.222 0.00 0.00 0.00 4.79
501 665 2.997897 ACACACCTCTCGCCTCCC 60.998 66.667 0.00 0.00 0.00 4.30
502 666 2.219325 CTCACACACCTCTCGCCTCC 62.219 65.000 0.00 0.00 0.00 4.30
503 667 1.214062 CTCACACACCTCTCGCCTC 59.786 63.158 0.00 0.00 0.00 4.70
504 668 0.613292 ATCTCACACACCTCTCGCCT 60.613 55.000 0.00 0.00 0.00 5.52
506 670 2.086054 AAATCTCACACACCTCTCGC 57.914 50.000 0.00 0.00 0.00 5.03
507 671 5.230942 AGTAAAAATCTCACACACCTCTCG 58.769 41.667 0.00 0.00 0.00 4.04
508 672 6.128795 CGAAGTAAAAATCTCACACACCTCTC 60.129 42.308 0.00 0.00 0.00 3.20
509 673 5.696724 CGAAGTAAAAATCTCACACACCTCT 59.303 40.000 0.00 0.00 0.00 3.69
510 674 5.465724 ACGAAGTAAAAATCTCACACACCTC 59.534 40.000 0.00 0.00 41.94 3.85
511 675 5.236478 CACGAAGTAAAAATCTCACACACCT 59.764 40.000 0.00 0.00 41.61 4.00
512 676 5.440685 CACGAAGTAAAAATCTCACACACC 58.559 41.667 0.00 0.00 41.61 4.16
513 677 4.904154 GCACGAAGTAAAAATCTCACACAC 59.096 41.667 0.00 0.00 41.61 3.82
514 678 4.024387 GGCACGAAGTAAAAATCTCACACA 60.024 41.667 0.00 0.00 41.61 3.72
516 680 4.130857 TGGCACGAAGTAAAAATCTCACA 58.869 39.130 0.00 0.00 41.61 3.58
518 682 4.637276 TCTGGCACGAAGTAAAAATCTCA 58.363 39.130 0.00 0.00 41.61 3.27
519 683 4.436183 GCTCTGGCACGAAGTAAAAATCTC 60.436 45.833 0.00 0.00 41.61 2.75
520 684 3.437049 GCTCTGGCACGAAGTAAAAATCT 59.563 43.478 0.00 0.00 41.61 2.40
521 685 3.725010 CGCTCTGGCACGAAGTAAAAATC 60.725 47.826 0.00 0.00 41.61 2.17
522 686 2.159627 CGCTCTGGCACGAAGTAAAAAT 59.840 45.455 0.00 0.00 41.61 1.82
523 687 1.529438 CGCTCTGGCACGAAGTAAAAA 59.471 47.619 0.00 0.00 41.61 1.94
524 688 1.144969 CGCTCTGGCACGAAGTAAAA 58.855 50.000 0.00 0.00 41.61 1.52
525 689 0.669318 CCGCTCTGGCACGAAGTAAA 60.669 55.000 0.00 0.00 41.61 2.01
528 692 3.165160 AACCGCTCTGGCACGAAGT 62.165 57.895 0.00 0.00 43.94 3.01
531 695 3.573772 CTCAACCGCTCTGGCACGA 62.574 63.158 0.00 0.00 43.94 4.35
533 697 0.320421 TTACTCAACCGCTCTGGCAC 60.320 55.000 0.00 0.00 43.94 5.01
534 698 0.394938 TTTACTCAACCGCTCTGGCA 59.605 50.000 0.00 0.00 43.94 4.92
535 699 1.197036 GTTTTACTCAACCGCTCTGGC 59.803 52.381 0.00 0.00 43.94 4.85
536 700 2.767505 AGTTTTACTCAACCGCTCTGG 58.232 47.619 0.00 0.00 46.41 3.86
537 701 4.389077 CCTTAGTTTTACTCAACCGCTCTG 59.611 45.833 0.00 0.00 0.00 3.35
538 702 4.282703 TCCTTAGTTTTACTCAACCGCTCT 59.717 41.667 0.00 0.00 0.00 4.09
539 703 4.563061 TCCTTAGTTTTACTCAACCGCTC 58.437 43.478 0.00 0.00 0.00 5.03
540 704 4.612264 TCCTTAGTTTTACTCAACCGCT 57.388 40.909 0.00 0.00 0.00 5.52
541 705 4.153655 CCTTCCTTAGTTTTACTCAACCGC 59.846 45.833 0.00 0.00 0.00 5.68
542 706 4.694037 CCCTTCCTTAGTTTTACTCAACCG 59.306 45.833 0.00 0.00 0.00 4.44
543 707 5.872963 TCCCTTCCTTAGTTTTACTCAACC 58.127 41.667 0.00 0.00 0.00 3.77
546 710 7.092578 CCCTTATCCCTTCCTTAGTTTTACTCA 60.093 40.741 0.00 0.00 0.00 3.41
548 712 6.739042 ACCCTTATCCCTTCCTTAGTTTTACT 59.261 38.462 0.00 0.00 0.00 2.24
551 715 5.554350 TGACCCTTATCCCTTCCTTAGTTTT 59.446 40.000 0.00 0.00 0.00 2.43
552 716 5.105853 TGACCCTTATCCCTTCCTTAGTTT 58.894 41.667 0.00 0.00 0.00 2.66
553 717 4.706616 TGACCCTTATCCCTTCCTTAGTT 58.293 43.478 0.00 0.00 0.00 2.24
554 718 4.015541 TCTGACCCTTATCCCTTCCTTAGT 60.016 45.833 0.00 0.00 0.00 2.24
555 719 4.557705 TCTGACCCTTATCCCTTCCTTAG 58.442 47.826 0.00 0.00 0.00 2.18
556 720 4.015541 ACTCTGACCCTTATCCCTTCCTTA 60.016 45.833 0.00 0.00 0.00 2.69
557 721 3.246535 ACTCTGACCCTTATCCCTTCCTT 60.247 47.826 0.00 0.00 0.00 3.36
558 722 2.319438 ACTCTGACCCTTATCCCTTCCT 59.681 50.000 0.00 0.00 0.00 3.36
559 723 2.765502 ACTCTGACCCTTATCCCTTCC 58.234 52.381 0.00 0.00 0.00 3.46
560 724 7.613551 TTTATACTCTGACCCTTATCCCTTC 57.386 40.000 0.00 0.00 0.00 3.46
561 725 8.582891 AATTTATACTCTGACCCTTATCCCTT 57.417 34.615 0.00 0.00 0.00 3.95
593 757 4.062293 CAGATCCATAATCCGCCGTAAAA 58.938 43.478 0.00 0.00 34.67 1.52
594 758 3.070446 ACAGATCCATAATCCGCCGTAAA 59.930 43.478 0.00 0.00 34.67 2.01
597 761 1.048601 ACAGATCCATAATCCGCCGT 58.951 50.000 0.00 0.00 34.67 5.68
598 762 2.169832 AACAGATCCATAATCCGCCG 57.830 50.000 0.00 0.00 34.67 6.46
600 764 3.997021 CACCTAACAGATCCATAATCCGC 59.003 47.826 0.00 0.00 34.67 5.54
601 765 3.997021 GCACCTAACAGATCCATAATCCG 59.003 47.826 0.00 0.00 34.67 4.18
602 766 3.997021 CGCACCTAACAGATCCATAATCC 59.003 47.826 0.00 0.00 34.67 3.01
603 767 3.433615 GCGCACCTAACAGATCCATAATC 59.566 47.826 0.30 0.00 34.30 1.75
604 768 3.403038 GCGCACCTAACAGATCCATAAT 58.597 45.455 0.30 0.00 0.00 1.28
605 769 2.801699 CGCGCACCTAACAGATCCATAA 60.802 50.000 8.75 0.00 0.00 1.90
607 771 0.530650 CGCGCACCTAACAGATCCAT 60.531 55.000 8.75 0.00 0.00 3.41
609 773 0.739813 AACGCGCACCTAACAGATCC 60.740 55.000 5.73 0.00 0.00 3.36
610 774 1.852895 CTAACGCGCACCTAACAGATC 59.147 52.381 5.73 0.00 0.00 2.75
611 775 1.475280 TCTAACGCGCACCTAACAGAT 59.525 47.619 5.73 0.00 0.00 2.90
612 776 0.883153 TCTAACGCGCACCTAACAGA 59.117 50.000 5.73 0.00 0.00 3.41
613 777 1.269166 CTCTAACGCGCACCTAACAG 58.731 55.000 5.73 0.00 0.00 3.16
614 778 0.108992 CCTCTAACGCGCACCTAACA 60.109 55.000 5.73 0.00 0.00 2.41
615 779 0.171903 TCCTCTAACGCGCACCTAAC 59.828 55.000 5.73 0.00 0.00 2.34
616 780 0.454600 CTCCTCTAACGCGCACCTAA 59.545 55.000 5.73 0.00 0.00 2.69
618 782 0.679002 TACTCCTCTAACGCGCACCT 60.679 55.000 5.73 0.00 0.00 4.00
620 784 1.986698 TTTACTCCTCTAACGCGCAC 58.013 50.000 5.73 0.00 0.00 5.34
622 786 1.657594 GGTTTTACTCCTCTAACGCGC 59.342 52.381 5.73 0.00 0.00 6.86
623 787 2.950433 TGGTTTTACTCCTCTAACGCG 58.050 47.619 3.53 3.53 0.00 6.01
624 788 5.874895 AATTGGTTTTACTCCTCTAACGC 57.125 39.130 0.00 0.00 0.00 4.84
646 810 4.010667 TCCAGCGCTAAAGGAGTAAAAA 57.989 40.909 10.99 0.00 0.00 1.94
649 813 3.321111 CCTATCCAGCGCTAAAGGAGTAA 59.679 47.826 18.61 7.57 34.40 2.24
650 814 2.891580 CCTATCCAGCGCTAAAGGAGTA 59.108 50.000 18.61 10.91 34.40 2.59
651 815 1.689273 CCTATCCAGCGCTAAAGGAGT 59.311 52.381 18.61 10.44 34.40 3.85
654 818 1.048601 TCCCTATCCAGCGCTAAAGG 58.951 55.000 10.99 14.25 0.00 3.11
655 819 3.330267 GAATCCCTATCCAGCGCTAAAG 58.670 50.000 10.99 4.98 0.00 1.85
656 820 2.038557 GGAATCCCTATCCAGCGCTAAA 59.961 50.000 10.99 0.17 36.92 1.85
657 821 1.623811 GGAATCCCTATCCAGCGCTAA 59.376 52.381 10.99 0.64 36.92 3.09
658 822 1.267121 GGAATCCCTATCCAGCGCTA 58.733 55.000 10.99 0.00 36.92 4.26
659 823 1.821061 CGGAATCCCTATCCAGCGCT 61.821 60.000 2.64 2.64 36.74 5.92
660 824 1.374758 CGGAATCCCTATCCAGCGC 60.375 63.158 0.00 0.00 36.74 5.92
661 825 1.254026 TACGGAATCCCTATCCAGCG 58.746 55.000 0.00 0.00 36.74 5.18
662 826 2.897969 TCTTACGGAATCCCTATCCAGC 59.102 50.000 0.00 0.00 36.74 4.85
663 827 5.546621 TTTCTTACGGAATCCCTATCCAG 57.453 43.478 0.00 0.00 36.74 3.86
664 828 5.744887 GCATTTCTTACGGAATCCCTATCCA 60.745 44.000 0.00 0.00 36.74 3.41
665 829 4.695928 GCATTTCTTACGGAATCCCTATCC 59.304 45.833 0.00 0.00 33.53 2.59
666 830 4.695928 GGCATTTCTTACGGAATCCCTATC 59.304 45.833 0.00 0.00 33.53 2.08
667 831 4.652822 GGCATTTCTTACGGAATCCCTAT 58.347 43.478 0.00 0.00 33.53 2.57
668 832 3.493699 CGGCATTTCTTACGGAATCCCTA 60.494 47.826 0.00 0.00 33.53 3.53
669 833 2.745152 CGGCATTTCTTACGGAATCCCT 60.745 50.000 0.00 0.00 33.53 4.20
670 834 1.602377 CGGCATTTCTTACGGAATCCC 59.398 52.381 0.00 0.00 33.53 3.85
671 835 2.285977 ACGGCATTTCTTACGGAATCC 58.714 47.619 0.00 0.00 33.53 3.01
672 836 3.486875 CCAACGGCATTTCTTACGGAATC 60.487 47.826 0.00 0.00 33.53 2.52
673 837 2.422127 CCAACGGCATTTCTTACGGAAT 59.578 45.455 0.00 0.00 33.53 3.01
674 838 1.807742 CCAACGGCATTTCTTACGGAA 59.192 47.619 0.00 0.00 0.00 4.30
675 839 1.444836 CCAACGGCATTTCTTACGGA 58.555 50.000 0.00 0.00 0.00 4.69
676 840 0.450184 CCCAACGGCATTTCTTACGG 59.550 55.000 0.00 0.00 0.00 4.02
677 841 1.161843 ACCCAACGGCATTTCTTACG 58.838 50.000 0.00 0.00 0.00 3.18
678 842 4.769859 TTAACCCAACGGCATTTCTTAC 57.230 40.909 0.00 0.00 0.00 2.34
679 843 4.767928 ACATTAACCCAACGGCATTTCTTA 59.232 37.500 0.00 0.00 0.00 2.10
680 844 3.576550 ACATTAACCCAACGGCATTTCTT 59.423 39.130 0.00 0.00 0.00 2.52
681 845 3.161866 ACATTAACCCAACGGCATTTCT 58.838 40.909 0.00 0.00 0.00 2.52
682 846 3.586100 ACATTAACCCAACGGCATTTC 57.414 42.857 0.00 0.00 0.00 2.17
683 847 4.201970 CGATACATTAACCCAACGGCATTT 60.202 41.667 0.00 0.00 0.00 2.32
685 849 2.875933 CGATACATTAACCCAACGGCAT 59.124 45.455 0.00 0.00 0.00 4.40
686 850 2.093606 TCGATACATTAACCCAACGGCA 60.094 45.455 0.00 0.00 0.00 5.69
687 851 2.553086 TCGATACATTAACCCAACGGC 58.447 47.619 0.00 0.00 0.00 5.68
688 852 3.059188 GCATCGATACATTAACCCAACGG 60.059 47.826 0.00 0.00 0.00 4.44
689 853 3.558006 TGCATCGATACATTAACCCAACG 59.442 43.478 0.00 0.00 0.00 4.10
692 856 3.495983 CCCTGCATCGATACATTAACCCA 60.496 47.826 0.00 0.00 0.00 4.51
694 858 2.484264 GCCCTGCATCGATACATTAACC 59.516 50.000 0.00 0.00 0.00 2.85
695 859 3.403038 AGCCCTGCATCGATACATTAAC 58.597 45.455 0.00 0.00 0.00 2.01
697 861 2.632512 TGAGCCCTGCATCGATACATTA 59.367 45.455 0.00 0.00 0.00 1.90
698 862 1.417517 TGAGCCCTGCATCGATACATT 59.582 47.619 0.00 0.00 0.00 2.71
699 863 1.051008 TGAGCCCTGCATCGATACAT 58.949 50.000 0.00 0.00 0.00 2.29
700 864 0.104855 GTGAGCCCTGCATCGATACA 59.895 55.000 0.00 0.00 0.00 2.29
701 865 0.104855 TGTGAGCCCTGCATCGATAC 59.895 55.000 0.00 0.00 0.00 2.24
702 866 1.051008 ATGTGAGCCCTGCATCGATA 58.949 50.000 0.00 0.00 0.00 2.92
705 869 2.184830 CCATGTGAGCCCTGCATCG 61.185 63.158 0.00 0.00 0.00 3.84
707 871 2.441532 GCCATGTGAGCCCTGCAT 60.442 61.111 0.00 0.00 0.00 3.96
709 873 1.976132 TAGAGCCATGTGAGCCCTGC 61.976 60.000 0.00 0.00 0.00 4.85
710 874 0.179062 GTAGAGCCATGTGAGCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
747 911 3.181511 TGAAGAAATATCGTGCTTTGCCG 60.182 43.478 0.00 0.00 0.00 5.69
782 946 3.029570 TGTGTGAGATGAGATGGGAGAG 58.970 50.000 0.00 0.00 0.00 3.20
785 949 2.093288 GCTTGTGTGAGATGAGATGGGA 60.093 50.000 0.00 0.00 0.00 4.37
808 972 3.902881 CAGGATCTCTTACCTGCAACT 57.097 47.619 0.00 0.00 45.30 3.16
815 979 1.049289 ACCGGGCAGGATCTCTTACC 61.049 60.000 11.67 0.00 45.00 2.85
891 1072 1.227674 GGCCGGGCAGAATCTGTAG 60.228 63.158 25.33 3.75 33.43 2.74
892 1073 2.908015 GGCCGGGCAGAATCTGTA 59.092 61.111 25.33 0.00 33.43 2.74
893 1074 4.473520 CGGCCGGGCAGAATCTGT 62.474 66.667 29.19 0.00 33.43 3.41
909 1090 2.443016 AGGAGTCCTGGCTAGCCG 60.443 66.667 28.28 21.44 39.42 5.52
910 1091 1.075600 AGAGGAGTCCTGGCTAGCC 60.076 63.158 27.71 27.71 31.76 3.93
911 1092 1.112916 GGAGAGGAGTCCTGGCTAGC 61.113 65.000 18.90 6.04 31.76 3.42
912 1093 0.260230 TGGAGAGGAGTCCTGGCTAG 59.740 60.000 18.90 0.00 37.52 3.42
913 1094 0.937441 ATGGAGAGGAGTCCTGGCTA 59.063 55.000 18.90 6.40 37.52 3.93
915 1096 1.743321 CGATGGAGAGGAGTCCTGGC 61.743 65.000 18.90 7.92 37.52 4.85
916 1097 0.106469 TCGATGGAGAGGAGTCCTGG 60.106 60.000 18.90 0.00 37.52 4.45
918 1099 1.544537 CGATCGATGGAGAGGAGTCCT 60.545 57.143 12.85 12.85 37.52 3.85
919 1100 0.878416 CGATCGATGGAGAGGAGTCC 59.122 60.000 10.26 0.00 37.10 3.85
920 1101 0.878416 CCGATCGATGGAGAGGAGTC 59.122 60.000 18.66 0.00 0.00 3.36
945 2438 2.276116 GCGGAGAGGTGTGAGGTGA 61.276 63.158 0.00 0.00 0.00 4.02
964 2462 2.284478 TGGGCTCTGCTCTGCTCT 60.284 61.111 0.00 0.00 0.00 4.09
965 2463 2.187424 CTGGGCTCTGCTCTGCTC 59.813 66.667 0.00 0.00 0.00 4.26
966 2464 3.400928 CCTGGGCTCTGCTCTGCT 61.401 66.667 0.00 0.00 0.00 4.24
967 2465 2.872931 CTTCCTGGGCTCTGCTCTGC 62.873 65.000 0.00 0.00 0.00 4.26
968 2466 1.221293 CTTCCTGGGCTCTGCTCTG 59.779 63.158 0.00 0.00 0.00 3.35
969 2467 0.977108 CTCTTCCTGGGCTCTGCTCT 60.977 60.000 0.00 0.00 0.00 4.09
984 2482 0.909610 TCATCGAACCCCTGCCTCTT 60.910 55.000 0.00 0.00 0.00 2.85
989 2487 2.464459 CGCTTCATCGAACCCCTGC 61.464 63.158 0.00 0.00 0.00 4.85
990 2488 2.464459 GCGCTTCATCGAACCCCTG 61.464 63.158 0.00 0.00 0.00 4.45
994 2492 1.258982 CACTATGCGCTTCATCGAACC 59.741 52.381 9.73 0.00 36.63 3.62
995 2493 1.258982 CCACTATGCGCTTCATCGAAC 59.741 52.381 9.73 0.00 36.63 3.95
996 2494 1.570813 CCACTATGCGCTTCATCGAA 58.429 50.000 9.73 0.00 36.63 3.71
997 2495 0.249447 CCCACTATGCGCTTCATCGA 60.249 55.000 9.73 0.00 36.63 3.59
998 2496 1.224069 CCCCACTATGCGCTTCATCG 61.224 60.000 9.73 0.00 36.63 3.84
1086 2584 1.154225 GAAAGCGGAACACATGGCG 60.154 57.895 0.00 0.00 0.00 5.69
1266 2806 3.056821 GCCTTTTGTGTATGAAACTCCCC 60.057 47.826 0.00 0.00 0.00 4.81
1278 2820 2.584835 TGCCATCTAGCCTTTTGTGT 57.415 45.000 0.00 0.00 0.00 3.72
1297 2839 6.350780 GGAAATGTATAGTATTCGACGGGGAT 60.351 42.308 0.00 0.00 0.00 3.85
1301 2843 7.941795 AAAGGAAATGTATAGTATTCGACGG 57.058 36.000 0.00 0.00 0.00 4.79
1302 2844 8.636843 GCTAAAGGAAATGTATAGTATTCGACG 58.363 37.037 0.00 0.00 0.00 5.12
1325 2869 3.132824 AGTCAATCCATGTCATGACGCTA 59.867 43.478 20.54 4.03 45.21 4.26
1372 2953 4.707105 TCCTACTTGTGTATGCATGATGG 58.293 43.478 10.16 0.00 0.00 3.51
1407 3036 3.181527 GCCGACTGGACAAATACGTTTAC 60.182 47.826 0.00 0.00 37.49 2.01
1429 3109 3.652057 ATCACCTAATGAAGTGGGTGG 57.348 47.619 12.48 0.00 46.36 4.61
1437 3117 7.872138 AGGAAATCACCTAATCACCTAATGAA 58.128 34.615 0.00 0.00 38.61 2.57
1439 3119 8.432805 ACTAGGAAATCACCTAATCACCTAATG 58.567 37.037 0.00 0.00 41.27 1.90
1440 3120 8.568617 ACTAGGAAATCACCTAATCACCTAAT 57.431 34.615 0.00 0.00 41.27 1.73
1441 3121 7.989947 ACTAGGAAATCACCTAATCACCTAA 57.010 36.000 0.00 0.00 41.27 2.69
1442 3122 7.622081 TGAACTAGGAAATCACCTAATCACCTA 59.378 37.037 0.00 0.00 41.27 3.08
1443 3123 6.443849 TGAACTAGGAAATCACCTAATCACCT 59.556 38.462 0.00 0.00 41.27 4.00
1444 3124 6.650120 TGAACTAGGAAATCACCTAATCACC 58.350 40.000 0.00 0.00 41.27 4.02
1445 3125 7.824779 ACTTGAACTAGGAAATCACCTAATCAC 59.175 37.037 0.00 0.00 41.27 3.06
1446 3126 7.918076 ACTTGAACTAGGAAATCACCTAATCA 58.082 34.615 0.00 0.00 41.27 2.57
1447 3127 8.794335 AACTTGAACTAGGAAATCACCTAATC 57.206 34.615 0.00 0.00 41.27 1.75
1448 3128 8.606830 AGAACTTGAACTAGGAAATCACCTAAT 58.393 33.333 0.00 0.00 41.27 1.73
1449 3129 7.974504 AGAACTTGAACTAGGAAATCACCTAA 58.025 34.615 0.00 0.00 41.27 2.69
1450 3130 7.554959 AGAACTTGAACTAGGAAATCACCTA 57.445 36.000 0.00 0.00 41.00 3.08
1451 3131 6.441088 AGAACTTGAACTAGGAAATCACCT 57.559 37.500 0.00 0.00 43.32 4.00
1452 3132 7.878644 ACTTAGAACTTGAACTAGGAAATCACC 59.121 37.037 0.00 0.00 0.00 4.02
1453 3133 8.834749 ACTTAGAACTTGAACTAGGAAATCAC 57.165 34.615 0.00 0.00 0.00 3.06
1454 3134 9.924650 GTACTTAGAACTTGAACTAGGAAATCA 57.075 33.333 0.00 0.00 0.00 2.57
1472 3152 9.032624 GGTGAGGCCATATATTTAGTACTTAGA 57.967 37.037 5.01 0.00 37.17 2.10
1473 3153 7.974501 CGGTGAGGCCATATATTTAGTACTTAG 59.025 40.741 5.01 0.00 36.97 2.18
1474 3154 7.093640 CCGGTGAGGCCATATATTTAGTACTTA 60.094 40.741 5.01 0.00 36.97 2.24
1475 3155 6.295688 CCGGTGAGGCCATATATTTAGTACTT 60.296 42.308 5.01 0.00 36.97 2.24
1480 3160 4.553330 ACCGGTGAGGCCATATATTTAG 57.447 45.455 6.12 0.00 46.52 1.85
1482 3162 3.649023 TGTACCGGTGAGGCCATATATTT 59.351 43.478 19.93 0.00 46.52 1.40
1571 3251 8.241367 AGGTATGAAATTTGTAATGGAACGAAC 58.759 33.333 0.00 0.00 0.00 3.95
1588 3268 3.221771 AGTGCTGCAAACAGGTATGAAA 58.778 40.909 2.77 0.00 44.63 2.69
1591 3271 3.599343 TCTAGTGCTGCAAACAGGTATG 58.401 45.455 2.77 0.00 44.63 2.39
1594 3274 2.618709 GTTTCTAGTGCTGCAAACAGGT 59.381 45.455 2.77 0.00 44.63 4.00
1597 3277 2.543848 CGAGTTTCTAGTGCTGCAAACA 59.456 45.455 2.77 0.00 32.20 2.83
1651 3331 7.873505 ACTTAAGTTCATGTAAACTCTCCAGAC 59.126 37.037 1.12 0.00 38.52 3.51
1924 3615 5.043762 AGGGAAAGGTCAATTGGTAGGATA 58.956 41.667 5.42 0.00 0.00 2.59
1942 3633 6.211986 TGTTAACTCGGAAAGATTCTAGGGAA 59.788 38.462 7.22 0.00 35.78 3.97
1979 3670 2.583101 AGACTGGTCCCTGACTAGATCA 59.417 50.000 13.59 0.00 42.49 2.92
2183 3890 9.719355 TTTAAGACTTTATGCAGTTCATAGTCA 57.281 29.630 7.97 0.00 40.65 3.41
2442 4149 5.351465 ACAATAGAAGTGATAAAGTGCACGG 59.649 40.000 12.01 0.00 39.88 4.94
2453 4160 3.881688 GCTGCATGGACAATAGAAGTGAT 59.118 43.478 0.00 0.00 0.00 3.06
2590 4315 5.371115 TTCTCATAAAGGAAGGCAAAACG 57.629 39.130 0.00 0.00 0.00 3.60
2600 4325 8.497910 AGGCTGTCTTATATTCTCATAAAGGA 57.502 34.615 0.00 0.00 0.00 3.36
2630 4355 4.429108 GAGCACCTGTGATAAAGAGTCTC 58.571 47.826 0.51 0.00 0.00 3.36
2636 4365 3.785486 TGATCGAGCACCTGTGATAAAG 58.215 45.455 0.00 0.00 0.00 1.85
2645 4378 1.537202 GCAAAGTTTGATCGAGCACCT 59.463 47.619 19.82 0.00 0.00 4.00
2669 4402 8.454570 AATTTCTTGCTCAAATGGACAATTTT 57.545 26.923 0.00 0.00 36.28 1.82
2735 4471 2.293677 TGTGATCACTGACATACCGC 57.706 50.000 25.55 0.00 0.00 5.68
2779 4516 1.857217 CGAGAACATGAGAATCGCCAG 59.143 52.381 0.00 0.00 38.61 4.85
2882 4619 1.214367 GACCGAAAGCGTGAACTGAA 58.786 50.000 0.00 0.00 35.23 3.02
2904 4641 1.821216 ACCATGTAAAGAACGCCAGG 58.179 50.000 0.00 0.00 0.00 4.45
2961 4705 3.650139 TGACTAGAAGAACGAAACCAGC 58.350 45.455 0.00 0.00 0.00 4.85
2981 4725 1.819226 GCGCGCATGTGAGAGAGATG 61.819 60.000 29.10 0.00 0.00 2.90
3062 4807 4.459331 CGAATGTTGCGTGCCCGG 62.459 66.667 0.00 0.00 33.68 5.73
3073 4818 7.823665 TCTATGTACTAACAAGTGACGAATGT 58.176 34.615 0.00 0.00 39.58 2.71
3116 4865 7.181305 TGTTCCACCTCACCTGAACTAAATATA 59.819 37.037 0.00 0.00 38.29 0.86
3161 4972 1.176527 CCTATTAATGCATGGCCCCG 58.823 55.000 0.00 0.00 0.00 5.73
3165 4976 7.693969 ATTACTCTTCCTATTAATGCATGGC 57.306 36.000 0.00 0.00 0.00 4.40
3179 4990 8.414778 CGACTTATCCCCATATATTACTCTTCC 58.585 40.741 0.00 0.00 0.00 3.46
3184 4995 5.889853 TCGCGACTTATCCCCATATATTACT 59.110 40.000 3.71 0.00 0.00 2.24
3194 5005 1.954528 TCGATCGCGACTTATCCCC 59.045 57.895 12.93 0.00 42.51 4.81
3215 5026 4.322057 ACCAGAGCAATTTTCCAGGTAT 57.678 40.909 0.00 0.00 0.00 2.73
3222 5033 5.649831 AGGATCAGTAACCAGAGCAATTTTC 59.350 40.000 0.00 0.00 0.00 2.29
3258 5098 4.552365 ATCCATGGCGCAGTCCCG 62.552 66.667 10.83 0.00 0.00 5.14
3311 5153 8.652810 AAACTGAAATTCCTTCTGAAAATGTG 57.347 30.769 0.00 0.00 36.33 3.21
3328 5170 3.815401 GCAGAGCAAGGACTAAACTGAAA 59.185 43.478 0.00 0.00 0.00 2.69
3346 5188 2.945008 CAGGTTGAAACAACAGAGCAGA 59.055 45.455 14.89 0.00 0.00 4.26
3404 5323 4.494350 ACTTCGATATGAATGCATTGCC 57.506 40.909 18.59 3.68 35.63 4.52
3462 5385 3.387397 AGGTTCGGCTTACGCATAATAC 58.613 45.455 0.00 0.00 43.86 1.89
3545 5468 4.976116 GCCTGACCGACATTAATATTTTGC 59.024 41.667 0.00 0.00 0.00 3.68
3547 5470 6.767524 TTGCCTGACCGACATTAATATTTT 57.232 33.333 0.00 0.00 0.00 1.82
3557 5480 2.302260 TGAATTTTTGCCTGACCGACA 58.698 42.857 0.00 0.00 0.00 4.35
3558 5481 3.575965 ATGAATTTTTGCCTGACCGAC 57.424 42.857 0.00 0.00 0.00 4.79
3638 5561 2.826128 TGCTTCTGAGGTGATTCTACGT 59.174 45.455 0.00 0.00 0.00 3.57
3640 5563 3.620821 GCTTGCTTCTGAGGTGATTCTAC 59.379 47.826 0.00 0.00 0.00 2.59
3644 5567 2.039480 TCAGCTTGCTTCTGAGGTGATT 59.961 45.455 1.54 0.00 43.24 2.57
3675 5598 3.515502 TCCAGGTGAAGATTCGTGAAGAT 59.484 43.478 0.00 0.00 0.00 2.40
3676 5599 2.897326 TCCAGGTGAAGATTCGTGAAGA 59.103 45.455 0.00 0.00 0.00 2.87
3677 5600 3.319137 TCCAGGTGAAGATTCGTGAAG 57.681 47.619 0.00 0.00 0.00 3.02
3678 5601 3.762407 TTCCAGGTGAAGATTCGTGAA 57.238 42.857 0.00 0.00 0.00 3.18
3679 5602 3.557054 CCTTTCCAGGTGAAGATTCGTGA 60.557 47.826 6.84 0.00 35.06 4.35
3680 5603 2.744202 CCTTTCCAGGTGAAGATTCGTG 59.256 50.000 6.84 0.00 35.06 4.35
3681 5604 2.876079 GCCTTTCCAGGTGAAGATTCGT 60.876 50.000 6.84 0.00 43.18 3.85
3682 5605 1.740025 GCCTTTCCAGGTGAAGATTCG 59.260 52.381 6.84 0.00 43.18 3.34
3683 5606 2.795329 TGCCTTTCCAGGTGAAGATTC 58.205 47.619 6.84 0.00 43.18 2.52
3712 5635 3.056313 GAAGATGTGCAAGCCGGCC 62.056 63.158 26.15 8.84 0.00 6.13
3850 5801 3.142162 CTGCCGCCATGAATGCCA 61.142 61.111 0.00 0.00 0.00 4.92
3854 5805 1.135527 CAATGAACTGCCGCCATGAAT 59.864 47.619 0.00 0.00 0.00 2.57
3862 5813 0.813184 AAGGATGCAATGAACTGCCG 59.187 50.000 0.00 0.00 41.90 5.69
3871 5822 6.893583 AGTGATTACAGACTAAGGATGCAAT 58.106 36.000 0.00 0.00 0.00 3.56
3913 5864 3.658757 AACCACCATTTTTCCGACATG 57.341 42.857 0.00 0.00 0.00 3.21
3919 5870 9.549078 TTATGTTAAAGAAACCACCATTTTTCC 57.451 29.630 0.00 0.00 37.27 3.13
3929 5880 7.724061 AGCTTCCTCTTTATGTTAAAGAAACCA 59.276 33.333 10.10 0.00 37.27 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.