Multiple sequence alignment - TraesCS5A01G527500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G527500 chr5A 100.000 3351 0 0 1 3351 688009438 688006088 0.000000e+00 6189.0
1 TraesCS5A01G527500 chr5A 96.996 233 7 0 3119 3351 134356452 134356684 3.130000e-105 392.0
2 TraesCS5A01G527500 chr5A 96.996 233 7 0 3119 3351 588289042 588288810 3.130000e-105 392.0
3 TraesCS5A01G527500 chr5A 88.095 252 22 6 2402 2646 706663104 706663354 3.270000e-75 292.0
4 TraesCS5A01G527500 chr5A 92.157 51 4 0 1011 1061 706670696 706670746 4.640000e-09 73.1
5 TraesCS5A01G527500 chr4D 86.913 1918 170 27 1260 3119 503598150 503596256 0.000000e+00 2076.0
6 TraesCS5A01G527500 chr4D 90.157 447 24 13 338 779 503599199 503598768 6.280000e-157 564.0
7 TraesCS5A01G527500 chr4D 90.066 151 12 1 991 1141 503598716 503598569 3.410000e-45 193.0
8 TraesCS5A01G527500 chr4B 87.144 1229 105 18 1925 3119 649360163 649358954 0.000000e+00 1345.0
9 TraesCS5A01G527500 chr4B 86.700 1015 93 24 938 1927 649361241 649360244 0.000000e+00 1088.0
10 TraesCS5A01G527500 chr4B 89.006 473 35 15 424 895 649361697 649361241 1.350000e-158 569.0
11 TraesCS5A01G527500 chr4B 87.251 251 24 6 2404 2647 667415984 667415735 2.550000e-71 279.0
12 TraesCS5A01G527500 chr4B 100.000 37 0 0 374 410 649361731 649361695 6.000000e-08 69.4
13 TraesCS5A01G527500 chr2A 97.425 233 6 0 3119 3351 623903251 623903483 6.740000e-107 398.0
14 TraesCS5A01G527500 chr2A 97.403 231 6 0 3119 3349 390589954 390590184 8.710000e-106 394.0
15 TraesCS5A01G527500 chr1A 97.425 233 6 0 3119 3351 303153855 303153623 6.740000e-107 398.0
16 TraesCS5A01G527500 chr7A 96.996 233 7 0 3119 3351 222845106 222844874 3.130000e-105 392.0
17 TraesCS5A01G527500 chr7A 96.996 233 7 0 3119 3351 272691152 272690920 3.130000e-105 392.0
18 TraesCS5A01G527500 chr7A 83.712 264 35 8 2860 3118 56150517 56150777 3.340000e-60 243.0
19 TraesCS5A01G527500 chr3A 96.996 233 7 0 3119 3351 542639065 542639297 3.130000e-105 392.0
20 TraesCS5A01G527500 chr3A 96.996 233 7 0 3119 3351 542644623 542644855 3.130000e-105 392.0
21 TraesCS5A01G527500 chrUn 79.954 434 44 18 2402 2793 30109744 30110176 2.550000e-71 279.0
22 TraesCS5A01G527500 chr5B 85.171 263 27 10 2862 3118 125792433 125792689 3.320000e-65 259.0
23 TraesCS5A01G527500 chr4A 85.600 250 30 6 2872 3118 719207997 719207751 1.190000e-64 257.0
24 TraesCS5A01G527500 chr4A 78.613 173 25 9 142 308 155841503 155841669 1.640000e-18 104.0
25 TraesCS5A01G527500 chr5D 84.462 251 27 9 2870 3116 114596705 114596947 1.550000e-58 237.0
26 TraesCS5A01G527500 chr3B 86.147 231 19 11 2870 3095 78568502 78568280 1.550000e-58 237.0
27 TraesCS5A01G527500 chr3B 81.955 266 31 14 2870 3126 783275385 783275642 3.390000e-50 209.0
28 TraesCS5A01G527500 chr6A 85.106 235 29 5 2888 3118 32602220 32602452 5.590000e-58 235.0
29 TraesCS5A01G527500 chr2D 86.301 219 23 6 2904 3118 533061719 533061504 7.230000e-57 231.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G527500 chr5A 688006088 688009438 3350 True 6189.000000 6189 100.000000 1 3351 1 chr5A.!!$R2 3350
1 TraesCS5A01G527500 chr4D 503596256 503599199 2943 True 944.333333 2076 89.045333 338 3119 3 chr4D.!!$R1 2781
2 TraesCS5A01G527500 chr4B 649358954 649361731 2777 True 767.850000 1345 90.712500 374 3119 4 chr4B.!!$R2 2745

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
217 218 0.312416 TTTGCATTGTACGTGGTGGC 59.688 50.0 0.0 0.0 0.0 5.01 F
1009 1015 0.031111 TCTTGATCGGATGGGGGACT 60.031 55.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1531 1938 0.102120 CCTCTCGGACATGAGCTCAC 59.898 60.0 20.97 6.39 35.9 3.51 R
2579 3096 0.035152 GGCATCACATCACCACCTCA 60.035 55.0 0.00 0.00 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.622260 AAAAACCTAGCATTTGCCATGT 57.378 36.364 0.00 0.00 43.38 3.21
39 40 4.622260 AAAACCTAGCATTTGCCATGTT 57.378 36.364 0.00 0.00 43.38 2.71
40 41 3.598019 AACCTAGCATTTGCCATGTTG 57.402 42.857 0.00 0.00 43.38 3.33
41 42 2.528564 ACCTAGCATTTGCCATGTTGT 58.471 42.857 0.00 0.00 43.38 3.32
42 43 3.696045 ACCTAGCATTTGCCATGTTGTA 58.304 40.909 0.00 0.00 43.38 2.41
43 44 3.443681 ACCTAGCATTTGCCATGTTGTAC 59.556 43.478 0.00 0.00 43.38 2.90
44 45 3.443329 CCTAGCATTTGCCATGTTGTACA 59.557 43.478 0.00 0.00 43.38 2.90
45 46 4.082300 CCTAGCATTTGCCATGTTGTACAA 60.082 41.667 3.59 3.59 43.38 2.41
46 47 4.333913 AGCATTTGCCATGTTGTACAAA 57.666 36.364 10.51 1.41 43.38 2.83
47 48 4.701765 AGCATTTGCCATGTTGTACAAAA 58.298 34.783 10.51 5.16 43.38 2.44
48 49 5.121811 AGCATTTGCCATGTTGTACAAAAA 58.878 33.333 10.51 6.61 43.38 1.94
49 50 5.236911 AGCATTTGCCATGTTGTACAAAAAG 59.763 36.000 10.51 1.40 43.38 2.27
50 51 5.007528 GCATTTGCCATGTTGTACAAAAAGT 59.992 36.000 10.51 0.00 35.79 2.66
51 52 6.458070 GCATTTGCCATGTTGTACAAAAAGTT 60.458 34.615 10.51 0.00 35.79 2.66
52 53 6.414408 TTTGCCATGTTGTACAAAAAGTTG 57.586 33.333 10.51 0.16 40.84 3.16
53 54 3.868077 TGCCATGTTGTACAAAAAGTTGC 59.132 39.130 10.51 9.14 38.39 4.17
54 55 3.247411 GCCATGTTGTACAAAAAGTTGCC 59.753 43.478 10.51 0.00 38.39 4.52
55 56 4.437239 CCATGTTGTACAAAAAGTTGCCA 58.563 39.130 10.51 1.68 38.39 4.92
56 57 5.055812 CCATGTTGTACAAAAAGTTGCCAT 58.944 37.500 10.51 4.14 38.39 4.40
57 58 6.219473 CCATGTTGTACAAAAAGTTGCCATA 58.781 36.000 10.51 0.00 38.39 2.74
58 59 6.365789 CCATGTTGTACAAAAAGTTGCCATAG 59.634 38.462 10.51 0.00 38.39 2.23
59 60 6.458232 TGTTGTACAAAAAGTTGCCATAGT 57.542 33.333 10.51 0.00 38.39 2.12
60 61 6.500041 TGTTGTACAAAAAGTTGCCATAGTC 58.500 36.000 10.51 0.00 38.39 2.59
61 62 5.699097 TGTACAAAAAGTTGCCATAGTCC 57.301 39.130 0.00 0.00 38.39 3.85
62 63 5.133941 TGTACAAAAAGTTGCCATAGTCCA 58.866 37.500 0.00 0.00 38.39 4.02
63 64 5.594725 TGTACAAAAAGTTGCCATAGTCCAA 59.405 36.000 0.00 0.00 38.39 3.53
64 65 5.606348 ACAAAAAGTTGCCATAGTCCAAA 57.394 34.783 0.00 0.00 38.39 3.28
65 66 5.983540 ACAAAAAGTTGCCATAGTCCAAAA 58.016 33.333 0.00 0.00 38.39 2.44
66 67 6.410540 ACAAAAAGTTGCCATAGTCCAAAAA 58.589 32.000 0.00 0.00 38.39 1.94
67 68 7.053498 ACAAAAAGTTGCCATAGTCCAAAAAT 58.947 30.769 0.00 0.00 38.39 1.82
68 69 8.207545 ACAAAAAGTTGCCATAGTCCAAAAATA 58.792 29.630 0.00 0.00 38.39 1.40
69 70 9.050601 CAAAAAGTTGCCATAGTCCAAAAATAA 57.949 29.630 0.00 0.00 0.00 1.40
70 71 9.620259 AAAAAGTTGCCATAGTCCAAAAATAAA 57.380 25.926 0.00 0.00 0.00 1.40
71 72 8.831715 AAAGTTGCCATAGTCCAAAAATAAAG 57.168 30.769 0.00 0.00 0.00 1.85
72 73 6.935167 AGTTGCCATAGTCCAAAAATAAAGG 58.065 36.000 0.00 0.00 0.00 3.11
73 74 5.930837 TGCCATAGTCCAAAAATAAAGGG 57.069 39.130 0.00 0.00 0.00 3.95
74 75 5.337788 TGCCATAGTCCAAAAATAAAGGGT 58.662 37.500 0.00 0.00 0.00 4.34
75 76 6.494952 TGCCATAGTCCAAAAATAAAGGGTA 58.505 36.000 0.00 0.00 0.00 3.69
76 77 6.954684 TGCCATAGTCCAAAAATAAAGGGTAA 59.045 34.615 0.00 0.00 0.00 2.85
77 78 7.455008 TGCCATAGTCCAAAAATAAAGGGTAAA 59.545 33.333 0.00 0.00 0.00 2.01
78 79 8.315482 GCCATAGTCCAAAAATAAAGGGTAAAA 58.685 33.333 0.00 0.00 0.00 1.52
115 116 6.728089 AAAAATCCCATGCAAACCAAAAAT 57.272 29.167 0.00 0.00 0.00 1.82
116 117 5.708877 AAATCCCATGCAAACCAAAAATG 57.291 34.783 0.00 0.00 0.00 2.32
117 118 3.853355 TCCCATGCAAACCAAAAATGT 57.147 38.095 0.00 0.00 0.00 2.71
118 119 3.474600 TCCCATGCAAACCAAAAATGTG 58.525 40.909 0.00 0.00 0.00 3.21
119 120 3.135348 TCCCATGCAAACCAAAAATGTGA 59.865 39.130 0.00 0.00 0.00 3.58
120 121 4.073549 CCCATGCAAACCAAAAATGTGAT 58.926 39.130 0.00 0.00 0.00 3.06
121 122 5.012458 TCCCATGCAAACCAAAAATGTGATA 59.988 36.000 0.00 0.00 0.00 2.15
122 123 5.881443 CCCATGCAAACCAAAAATGTGATAT 59.119 36.000 0.00 0.00 0.00 1.63
123 124 6.374894 CCCATGCAAACCAAAAATGTGATATT 59.625 34.615 0.00 0.00 0.00 1.28
124 125 7.414319 CCCATGCAAACCAAAAATGTGATATTC 60.414 37.037 0.00 0.00 0.00 1.75
125 126 7.334921 CCATGCAAACCAAAAATGTGATATTCT 59.665 33.333 0.00 0.00 0.00 2.40
126 127 8.723311 CATGCAAACCAAAAATGTGATATTCTT 58.277 29.630 0.00 0.00 0.00 2.52
127 128 8.674263 TGCAAACCAAAAATGTGATATTCTTT 57.326 26.923 0.00 0.00 0.00 2.52
128 129 9.770097 TGCAAACCAAAAATGTGATATTCTTTA 57.230 25.926 0.00 0.00 0.00 1.85
155 156 6.806388 AAAATTGCCATGGTCAAAAAGATC 57.194 33.333 20.56 0.00 0.00 2.75
156 157 5.750352 AATTGCCATGGTCAAAAAGATCT 57.250 34.783 20.56 0.00 0.00 2.75
157 158 5.750352 ATTGCCATGGTCAAAAAGATCTT 57.250 34.783 20.56 0.88 0.00 2.40
158 159 5.549742 TTGCCATGGTCAAAAAGATCTTT 57.450 34.783 15.11 15.11 0.00 2.52
159 160 4.885413 TGCCATGGTCAAAAAGATCTTTG 58.115 39.130 21.15 10.89 37.59 2.77
160 161 4.248058 GCCATGGTCAAAAAGATCTTTGG 58.752 43.478 21.15 16.17 37.00 3.28
161 162 4.262592 GCCATGGTCAAAAAGATCTTTGGT 60.263 41.667 21.15 9.85 37.00 3.67
162 163 5.742838 GCCATGGTCAAAAAGATCTTTGGTT 60.743 40.000 21.15 10.11 37.00 3.67
163 164 6.518200 GCCATGGTCAAAAAGATCTTTGGTTA 60.518 38.462 21.15 6.96 37.00 2.85
164 165 7.614494 CCATGGTCAAAAAGATCTTTGGTTAT 58.386 34.615 21.15 8.78 37.00 1.89
165 166 7.546667 CCATGGTCAAAAAGATCTTTGGTTATG 59.453 37.037 21.15 17.80 37.00 1.90
166 167 6.454795 TGGTCAAAAAGATCTTTGGTTATGC 58.545 36.000 21.15 8.22 37.00 3.14
167 168 6.041409 TGGTCAAAAAGATCTTTGGTTATGCA 59.959 34.615 21.15 7.58 37.00 3.96
168 169 6.928492 GGTCAAAAAGATCTTTGGTTATGCAA 59.072 34.615 21.15 0.00 37.00 4.08
169 170 7.603784 GGTCAAAAAGATCTTTGGTTATGCAAT 59.396 33.333 21.15 0.00 37.00 3.56
170 171 8.437742 GTCAAAAAGATCTTTGGTTATGCAATG 58.562 33.333 21.15 8.00 37.00 2.82
171 172 7.603404 TCAAAAAGATCTTTGGTTATGCAATGG 59.397 33.333 21.15 0.00 37.00 3.16
172 173 4.660789 AGATCTTTGGTTATGCAATGGC 57.339 40.909 0.00 0.00 41.68 4.40
173 174 6.520401 AAAAGATCTTTGGTTATGCAATGGCA 60.520 34.615 21.15 0.00 43.00 4.92
174 175 8.485079 AAAAGATCTTTGGTTATGCAATGGCAC 61.485 37.037 21.15 0.00 42.21 5.01
214 215 2.671596 GCAATTTGCATTGTACGTGGT 58.328 42.857 16.35 0.00 44.26 4.16
215 216 2.408032 GCAATTTGCATTGTACGTGGTG 59.592 45.455 16.35 0.00 44.26 4.17
216 217 2.985809 CAATTTGCATTGTACGTGGTGG 59.014 45.455 0.00 0.00 35.86 4.61
217 218 0.312416 TTTGCATTGTACGTGGTGGC 59.688 50.000 0.00 0.00 0.00 5.01
218 219 0.819666 TTGCATTGTACGTGGTGGCA 60.820 50.000 0.00 0.00 0.00 4.92
219 220 0.819666 TGCATTGTACGTGGTGGCAA 60.820 50.000 0.00 0.00 0.00 4.52
220 221 0.312416 GCATTGTACGTGGTGGCAAA 59.688 50.000 0.00 0.00 0.00 3.68
221 222 1.269309 GCATTGTACGTGGTGGCAAAA 60.269 47.619 0.00 0.00 0.00 2.44
222 223 2.799917 GCATTGTACGTGGTGGCAAAAA 60.800 45.455 0.00 0.00 0.00 1.94
296 297 9.669887 AATGTGTATTAAAATTTGCCATCATGT 57.330 25.926 0.00 0.00 0.00 3.21
297 298 8.476657 TGTGTATTAAAATTTGCCATCATGTG 57.523 30.769 0.00 0.00 0.00 3.21
324 325 5.964758 CACAAAAGGTGCACCATATATTGT 58.035 37.500 36.39 29.87 41.36 2.71
325 326 6.397272 CACAAAAGGTGCACCATATATTGTT 58.603 36.000 36.39 17.17 41.36 2.83
326 327 6.873076 CACAAAAGGTGCACCATATATTGTTT 59.127 34.615 36.39 21.80 41.36 2.83
327 328 8.031864 CACAAAAGGTGCACCATATATTGTTTA 58.968 33.333 36.39 0.00 41.36 2.01
328 329 8.757877 ACAAAAGGTGCACCATATATTGTTTAT 58.242 29.630 36.39 14.33 38.89 1.40
329 330 9.598517 CAAAAGGTGCACCATATATTGTTTATT 57.401 29.630 36.39 14.95 38.89 1.40
368 369 1.917782 GCCGCTGCCATGTTTCGTAA 61.918 55.000 0.00 0.00 0.00 3.18
411 412 1.673665 GACTTGTCAGGCAGGCAGG 60.674 63.158 0.00 0.00 34.67 4.85
517 519 3.372458 GCCTCCTCCCTCAAAGATGAAAT 60.372 47.826 0.00 0.00 34.49 2.17
554 556 2.361104 CCCTGCGCTGCCCTTTTA 60.361 61.111 9.73 0.00 0.00 1.52
562 564 2.164422 GCGCTGCCCTTTTATTTCTTCT 59.836 45.455 0.00 0.00 0.00 2.85
566 568 5.645624 GCTGCCCTTTTATTTCTTCTTCTC 58.354 41.667 0.00 0.00 0.00 2.87
567 569 5.417266 GCTGCCCTTTTATTTCTTCTTCTCT 59.583 40.000 0.00 0.00 0.00 3.10
568 570 6.624642 GCTGCCCTTTTATTTCTTCTTCTCTG 60.625 42.308 0.00 0.00 0.00 3.35
571 573 6.404184 GCCCTTTTATTTCTTCTTCTCTGCTC 60.404 42.308 0.00 0.00 0.00 4.26
572 574 6.883756 CCCTTTTATTTCTTCTTCTCTGCTCT 59.116 38.462 0.00 0.00 0.00 4.09
574 576 7.823799 CCTTTTATTTCTTCTTCTCTGCTCTCT 59.176 37.037 0.00 0.00 0.00 3.10
575 577 8.770438 TTTTATTTCTTCTTCTCTGCTCTCTC 57.230 34.615 0.00 0.00 0.00 3.20
576 578 7.716799 TTATTTCTTCTTCTCTGCTCTCTCT 57.283 36.000 0.00 0.00 0.00 3.10
577 579 5.643379 TTTCTTCTTCTCTGCTCTCTCTC 57.357 43.478 0.00 0.00 0.00 3.20
578 580 4.574674 TCTTCTTCTCTGCTCTCTCTCT 57.425 45.455 0.00 0.00 0.00 3.10
579 581 4.517285 TCTTCTTCTCTGCTCTCTCTCTC 58.483 47.826 0.00 0.00 0.00 3.20
580 582 4.225942 TCTTCTTCTCTGCTCTCTCTCTCT 59.774 45.833 0.00 0.00 0.00 3.10
581 583 4.142609 TCTTCTCTGCTCTCTCTCTCTC 57.857 50.000 0.00 0.00 0.00 3.20
582 584 3.776969 TCTTCTCTGCTCTCTCTCTCTCT 59.223 47.826 0.00 0.00 0.00 3.10
583 585 3.827008 TCTCTGCTCTCTCTCTCTCTC 57.173 52.381 0.00 0.00 0.00 3.20
584 586 3.378512 TCTCTGCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
585 587 3.386078 TCTCTGCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
586 588 3.378512 TCTGCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
587 589 3.386078 TCTGCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
588 590 3.378512 TGCTCTCTCTCTCTCTCTCTCT 58.621 50.000 0.00 0.00 0.00 3.10
589 591 3.386078 TGCTCTCTCTCTCTCTCTCTCTC 59.614 52.174 0.00 0.00 0.00 3.20
600 602 3.776969 TCTCTCTCTCTCTCTCTCTGCTT 59.223 47.826 0.00 0.00 0.00 3.91
601 603 3.875727 CTCTCTCTCTCTCTCTCTGCTTG 59.124 52.174 0.00 0.00 0.00 4.01
602 604 2.357009 CTCTCTCTCTCTCTCTGCTTGC 59.643 54.545 0.00 0.00 0.00 4.01
603 605 2.025981 TCTCTCTCTCTCTCTGCTTGCT 60.026 50.000 0.00 0.00 0.00 3.91
604 606 2.093890 TCTCTCTCTCTCTGCTTGCTG 58.906 52.381 0.00 0.00 0.00 4.41
605 607 1.135527 CTCTCTCTCTCTGCTTGCTGG 59.864 57.143 0.00 0.00 0.00 4.85
633 635 4.081476 GGTGCAGGCCAGATATTTTTCTTT 60.081 41.667 5.01 0.00 0.00 2.52
712 717 0.726827 CGACCAAATCCCACACATCG 59.273 55.000 0.00 0.00 0.00 3.84
734 739 0.631753 TCCCCTCTTCTCCATCGACT 59.368 55.000 0.00 0.00 0.00 4.18
744 749 4.801330 TCTCCATCGACTTGAGCTTTTA 57.199 40.909 0.00 0.00 0.00 1.52
747 752 5.127845 TCTCCATCGACTTGAGCTTTTATCT 59.872 40.000 0.00 0.00 0.00 1.98
788 793 4.674281 ATCCTGATTTCTACGTCCTTCC 57.326 45.455 0.00 0.00 0.00 3.46
838 843 1.304464 TTGCGGAGGAGAGAGCTCA 60.304 57.895 17.77 0.00 43.14 4.26
853 858 4.681744 AGAGCTCAAATCTTGTCGATCTC 58.318 43.478 17.77 0.00 0.00 2.75
873 879 0.601841 TTCGTCCAACCGCTCTTTCC 60.602 55.000 0.00 0.00 0.00 3.13
878 884 2.048503 AACCGCTCTTTCCGACCG 60.049 61.111 0.00 0.00 0.00 4.79
896 902 2.180017 CCGTCGATTTCGGTCCGT 59.820 61.111 11.88 0.00 42.62 4.69
897 903 1.444895 CCGTCGATTTCGGTCCGTT 60.445 57.895 11.88 0.00 42.62 4.44
898 904 1.010419 CCGTCGATTTCGGTCCGTTT 61.010 55.000 11.88 0.00 42.62 3.60
899 905 0.785979 CGTCGATTTCGGTCCGTTTT 59.214 50.000 11.88 0.00 40.29 2.43
900 906 1.192980 CGTCGATTTCGGTCCGTTTTT 59.807 47.619 11.88 0.00 40.29 1.94
901 907 2.719688 CGTCGATTTCGGTCCGTTTTTC 60.720 50.000 11.88 3.94 40.29 2.29
902 908 2.477754 GTCGATTTCGGTCCGTTTTTCT 59.522 45.455 11.88 0.00 40.29 2.52
903 909 2.733026 TCGATTTCGGTCCGTTTTTCTC 59.267 45.455 11.88 0.71 40.29 2.87
904 910 2.477375 CGATTTCGGTCCGTTTTTCTCA 59.523 45.455 11.88 0.00 35.37 3.27
905 911 3.124636 CGATTTCGGTCCGTTTTTCTCAT 59.875 43.478 11.88 0.00 35.37 2.90
906 912 4.648970 GATTTCGGTCCGTTTTTCTCATC 58.351 43.478 11.88 0.00 0.00 2.92
907 913 2.823924 TCGGTCCGTTTTTCTCATCA 57.176 45.000 11.88 0.00 0.00 3.07
908 914 3.114668 TCGGTCCGTTTTTCTCATCAA 57.885 42.857 11.88 0.00 0.00 2.57
909 915 3.064207 TCGGTCCGTTTTTCTCATCAAG 58.936 45.455 11.88 0.00 0.00 3.02
910 916 2.159627 CGGTCCGTTTTTCTCATCAAGG 59.840 50.000 2.08 0.00 0.00 3.61
911 917 2.488153 GGTCCGTTTTTCTCATCAAGGG 59.512 50.000 0.00 0.00 0.00 3.95
912 918 2.488153 GTCCGTTTTTCTCATCAAGGGG 59.512 50.000 0.00 0.00 0.00 4.79
913 919 1.818674 CCGTTTTTCTCATCAAGGGGG 59.181 52.381 0.00 0.00 0.00 5.40
928 934 3.430149 GGGGGAAAGGAGGTAGGAA 57.570 57.895 0.00 0.00 0.00 3.36
929 935 1.214217 GGGGGAAAGGAGGTAGGAAG 58.786 60.000 0.00 0.00 0.00 3.46
930 936 1.214217 GGGGAAAGGAGGTAGGAAGG 58.786 60.000 0.00 0.00 0.00 3.46
931 937 1.274242 GGGGAAAGGAGGTAGGAAGGA 60.274 57.143 0.00 0.00 0.00 3.36
932 938 2.558974 GGGAAAGGAGGTAGGAAGGAA 58.441 52.381 0.00 0.00 0.00 3.36
933 939 2.917600 GGGAAAGGAGGTAGGAAGGAAA 59.082 50.000 0.00 0.00 0.00 3.13
934 940 3.054287 GGGAAAGGAGGTAGGAAGGAAAG 60.054 52.174 0.00 0.00 0.00 2.62
935 941 3.054287 GGAAAGGAGGTAGGAAGGAAAGG 60.054 52.174 0.00 0.00 0.00 3.11
936 942 3.579742 AAGGAGGTAGGAAGGAAAGGA 57.420 47.619 0.00 0.00 0.00 3.36
947 953 5.320277 AGGAAGGAAAGGACTGAATCTTTG 58.680 41.667 0.00 0.00 33.85 2.77
948 954 4.082517 GGAAGGAAAGGACTGAATCTTTGC 60.083 45.833 0.00 0.00 40.20 3.68
968 974 2.291741 GCTTCCATCCATTTCATCGGAC 59.708 50.000 0.00 0.00 33.05 4.79
976 982 6.016024 CCATCCATTTCATCGGACACATAAAT 60.016 38.462 0.00 0.00 33.05 1.40
981 987 8.450964 CCATTTCATCGGACACATAAATATACC 58.549 37.037 0.00 0.00 0.00 2.73
998 1004 2.393271 ACCCTGCTTCTTCTTGATCG 57.607 50.000 0.00 0.00 0.00 3.69
1009 1015 0.031111 TCTTGATCGGATGGGGGACT 60.031 55.000 0.00 0.00 0.00 3.85
1025 1031 2.489971 GGACTTGTCCACGATTCAACA 58.510 47.619 14.34 0.00 0.00 3.33
1064 1075 5.103000 CGCCAAGGTAATCTAATCTATCCG 58.897 45.833 0.00 0.00 0.00 4.18
1072 1083 5.808366 AATCTAATCTATCCGTGCCTGAA 57.192 39.130 0.00 0.00 0.00 3.02
1085 1096 4.549458 CGTGCCTGAATGTTTTTCTGATT 58.451 39.130 0.00 0.00 0.00 2.57
1094 1105 6.698329 TGAATGTTTTTCTGATTCACTGCAAG 59.302 34.615 0.00 0.00 42.29 4.01
1138 1187 7.837863 TCGACTTATGTTTGATTTCCTAGTCT 58.162 34.615 0.00 0.00 0.00 3.24
1139 1188 7.974501 TCGACTTATGTTTGATTTCCTAGTCTC 59.025 37.037 0.00 0.00 0.00 3.36
1140 1189 7.976734 CGACTTATGTTTGATTTCCTAGTCTCT 59.023 37.037 0.00 0.00 0.00 3.10
1141 1190 9.092876 GACTTATGTTTGATTTCCTAGTCTCTG 57.907 37.037 0.00 0.00 0.00 3.35
1142 1191 8.816894 ACTTATGTTTGATTTCCTAGTCTCTGA 58.183 33.333 0.00 0.00 0.00 3.27
1143 1192 9.829507 CTTATGTTTGATTTCCTAGTCTCTGAT 57.170 33.333 0.00 0.00 0.00 2.90
1154 1203 9.838339 TTTCCTAGTCTCTGATAAATGAAATCC 57.162 33.333 0.00 0.00 0.00 3.01
1155 1204 8.789767 TCCTAGTCTCTGATAAATGAAATCCT 57.210 34.615 0.00 0.00 0.00 3.24
1156 1205 9.218525 TCCTAGTCTCTGATAAATGAAATCCTT 57.781 33.333 0.00 0.00 0.00 3.36
1157 1206 9.270640 CCTAGTCTCTGATAAATGAAATCCTTG 57.729 37.037 0.00 0.00 0.00 3.61
1160 1209 9.917887 AGTCTCTGATAAATGAAATCCTTGATT 57.082 29.630 0.00 0.00 33.25 2.57
1164 1213 9.857656 TCTGATAAATGAAATCCTTGATTAGCT 57.142 29.630 0.00 0.00 31.46 3.32
1166 1215 9.631257 TGATAAATGAAATCCTTGATTAGCTCA 57.369 29.630 0.00 0.00 31.46 4.26
1168 1217 7.951347 AAATGAAATCCTTGATTAGCTCAGT 57.049 32.000 0.00 0.00 34.68 3.41
1170 1219 9.638176 AAATGAAATCCTTGATTAGCTCAGTAT 57.362 29.630 0.00 0.00 34.68 2.12
1171 1220 9.638176 AATGAAATCCTTGATTAGCTCAGTATT 57.362 29.630 0.00 0.00 34.68 1.89
1172 1221 8.668510 TGAAATCCTTGATTAGCTCAGTATTC 57.331 34.615 0.00 0.00 34.68 1.75
1198 1247 2.355756 GCAATTAGCTCTTGCCAATCGA 59.644 45.455 18.57 0.00 42.47 3.59
1202 1251 1.376543 AGCTCTTGCCAATCGACATG 58.623 50.000 0.00 0.00 40.80 3.21
1233 1282 3.179010 TCGACTCGAAAAGTACAGACG 57.821 47.619 0.00 0.00 38.74 4.18
1247 1296 0.239347 CAGACGAAGCCAGGCAAAAG 59.761 55.000 15.80 4.37 0.00 2.27
1248 1297 0.179018 AGACGAAGCCAGGCAAAAGT 60.179 50.000 15.80 7.93 0.00 2.66
1249 1298 1.071699 AGACGAAGCCAGGCAAAAGTA 59.928 47.619 15.80 0.00 0.00 2.24
1252 1301 1.606668 CGAAGCCAGGCAAAAGTACAA 59.393 47.619 15.80 0.00 0.00 2.41
1253 1302 2.350772 CGAAGCCAGGCAAAAGTACAAG 60.351 50.000 15.80 0.00 0.00 3.16
1256 1640 2.158608 AGCCAGGCAAAAGTACAAGTCT 60.159 45.455 15.80 0.00 0.00 3.24
1258 1650 3.437049 GCCAGGCAAAAGTACAAGTCTAG 59.563 47.826 6.55 0.00 0.00 2.43
1262 1654 5.177696 CAGGCAAAAGTACAAGTCTAGTGAC 59.822 44.000 0.00 0.00 43.22 3.67
1297 1689 6.588719 TGGAAATGGAAATGACCTGTAAAG 57.411 37.500 0.00 0.00 0.00 1.85
1310 1702 6.303054 TGACCTGTAAAGTGGAAAATGATCA 58.697 36.000 0.00 0.00 0.00 2.92
1332 1724 2.315925 TCTTATTCTTCAGCAGGGCG 57.684 50.000 0.00 0.00 0.00 6.13
1334 1726 1.936547 CTTATTCTTCAGCAGGGCGAC 59.063 52.381 0.00 0.00 0.00 5.19
1380 1772 0.179032 ATGGACAAACGACAGCCACA 60.179 50.000 0.00 0.00 0.00 4.17
1381 1773 0.813610 TGGACAAACGACAGCCACAG 60.814 55.000 0.00 0.00 0.00 3.66
1417 1809 2.747855 GGAGGCCTCCTTTGTGCG 60.748 66.667 39.99 0.00 46.16 5.34
1487 1894 0.323725 GGAACATCACCCATGTGGCT 60.324 55.000 0.00 0.00 45.77 4.75
1627 2034 3.365265 GCGTTTCAGGCCACCCAG 61.365 66.667 5.01 0.00 0.00 4.45
1643 2050 2.434702 ACCCAGAGATTATTCCGGTGTC 59.565 50.000 0.00 0.00 0.00 3.67
1715 2122 1.511464 CGAGACGGTTCCGAAGACG 60.511 63.158 18.28 12.64 39.43 4.18
1728 2135 0.032130 GAAGACGGCTCGGATGCATA 59.968 55.000 0.00 0.00 34.04 3.14
1748 2155 5.448360 GCATAGAAGAGAAGTGGACATTTGC 60.448 44.000 0.00 0.00 0.00 3.68
1751 2158 0.169009 GAGAAGTGGACATTTGCGCC 59.831 55.000 4.18 0.00 0.00 6.53
1754 2161 3.053291 GTGGACATTTGCGCCGGA 61.053 61.111 5.05 0.00 0.00 5.14
1816 2223 9.545105 TTCATTATCTTGTTTGCAGATTGTTTT 57.455 25.926 0.00 0.00 0.00 2.43
1821 2228 6.198687 TCTTGTTTGCAGATTGTTTTCTACG 58.801 36.000 0.00 0.00 0.00 3.51
1869 2276 5.353678 AGAAGTTCAGAATTGCTATGCAGTC 59.646 40.000 5.50 0.00 40.61 3.51
1913 2329 8.903820 TGATATGAATTCAGAAGAGTCGACTAA 58.096 33.333 20.09 8.45 0.00 2.24
1976 2475 6.966534 ATCCAATAATTGTGATCCAAGGAC 57.033 37.500 0.00 0.00 36.25 3.85
1977 2476 5.200483 TCCAATAATTGTGATCCAAGGACC 58.800 41.667 0.00 0.00 36.25 4.46
2070 2569 5.637006 TTGTTTGTCATATAAAGCGGCTT 57.363 34.783 9.94 9.94 0.00 4.35
2087 2586 4.440112 GCGGCTTTAACTGAATTGGCTATT 60.440 41.667 0.00 0.00 0.00 1.73
2199 2716 5.050363 TGTTAGTCTGACAAGCATTTCGTTC 60.050 40.000 10.88 0.00 0.00 3.95
2232 2749 4.042684 AGAAGCCTCTGGTCAGAATTTTCT 59.957 41.667 2.13 7.95 36.94 2.52
2272 2789 3.132289 CCATTGCTCAGCCAATCAAATCT 59.868 43.478 0.00 0.00 33.35 2.40
2280 2797 4.082408 TCAGCCAATCAAATCTTGCAAGAG 60.082 41.667 31.14 19.37 38.66 2.85
2310 2827 4.020617 CCCTTCCACCGCTGCAGA 62.021 66.667 20.43 0.00 0.00 4.26
2319 2836 1.741706 CACCGCTGCAGATTCTTTCAT 59.258 47.619 20.43 0.00 0.00 2.57
2329 2846 4.201891 GCAGATTCTTTCATGTCGATGCTT 60.202 41.667 0.00 0.00 0.00 3.91
2336 2853 1.328374 TCATGTCGATGCTTGAATGCG 59.672 47.619 0.00 0.00 35.36 4.73
2362 2879 0.546122 AGCGGTGATGAAGGCCAATA 59.454 50.000 5.01 0.00 0.00 1.90
2370 2887 6.429692 CGGTGATGAAGGCCAATATATGTTTA 59.570 38.462 5.01 0.00 0.00 2.01
2423 2940 8.371699 ACTAGTTCTAGAAATTCTTGCTGAAGT 58.628 33.333 11.16 2.31 38.18 3.01
2434 2951 8.621532 AATTCTTGCTGAAGTAGTTGTGATAA 57.378 30.769 0.00 0.00 38.18 1.75
2437 2954 7.892609 TCTTGCTGAAGTAGTTGTGATAAGTA 58.107 34.615 0.00 0.00 0.00 2.24
2445 2962 7.299246 AGTAGTTGTGATAAGTAACTGGTGT 57.701 36.000 0.00 0.00 36.22 4.16
2468 2985 6.596106 TGTGGCTGCTAATATTTTTAACTCGA 59.404 34.615 0.00 0.00 0.00 4.04
2482 2999 1.025812 ACTCGACGGATAGCTCTTGG 58.974 55.000 0.00 0.00 0.00 3.61
2498 3015 0.756294 TTGGTCGGTCTGCTCTTTCA 59.244 50.000 0.00 0.00 0.00 2.69
2512 3029 3.858877 GCTCTTTCAGCGTGAAGAGAAGA 60.859 47.826 22.02 11.40 37.70 2.87
2571 3088 2.419324 CAGGCTCAAGTTTGCAGATCTC 59.581 50.000 0.00 0.00 0.00 2.75
2579 3096 2.564947 AGTTTGCAGATCTCCGAGAGTT 59.435 45.455 4.07 0.00 0.00 3.01
2604 3124 1.073603 TGGTGATGTGATGCCTTGTGA 59.926 47.619 0.00 0.00 0.00 3.58
2687 3207 2.574006 ACATGACTGTTGATGCCACT 57.426 45.000 0.00 0.00 28.70 4.00
2688 3208 2.156917 ACATGACTGTTGATGCCACTG 58.843 47.619 0.00 0.00 28.70 3.66
2737 3272 3.679389 TGGCAATCTCTCTGTTTCTTCC 58.321 45.455 0.00 0.00 0.00 3.46
2744 3279 3.006323 TCTCTCTGTTTCTTCCTCTGCAC 59.994 47.826 0.00 0.00 0.00 4.57
2772 3307 3.119316 TGGTTGTGTTGTGCTAAAACTGG 60.119 43.478 0.00 0.00 0.00 4.00
2784 3319 5.468746 GTGCTAAAACTGGAGTATGTTGTGA 59.531 40.000 0.00 0.00 0.00 3.58
2868 3403 1.267261 CGAGGTCTTCGCCGAGAATAT 59.733 52.381 0.00 0.00 43.22 1.28
2882 3417 3.616821 CGAGAATATCGTTGCAAAGACCA 59.383 43.478 17.44 8.90 46.62 4.02
3069 3608 5.454613 CCCAAATACAACAAAGAAAAGGCCT 60.455 40.000 0.00 0.00 0.00 5.19
3077 3616 8.657074 ACAACAAAGAAAAGGCCTATTTTAAC 57.343 30.769 5.16 0.00 32.62 2.01
3081 3620 8.646900 ACAAAGAAAAGGCCTATTTTAACATGA 58.353 29.630 5.16 0.00 32.62 3.07
3082 3621 9.487790 CAAAGAAAAGGCCTATTTTAACATGAA 57.512 29.630 5.16 0.00 32.62 2.57
3122 3661 8.621532 GTGTACATCACATATGAATATGGGTT 57.378 34.615 10.38 2.15 43.13 4.11
3123 3662 8.721478 GTGTACATCACATATGAATATGGGTTC 58.279 37.037 10.38 5.11 43.13 3.62
3124 3663 8.435982 TGTACATCACATATGAATATGGGTTCA 58.564 33.333 10.38 6.98 43.13 3.18
3139 3678 6.699575 ATGGGTTCATACTTTCAATAGTGC 57.300 37.500 0.00 0.00 0.00 4.40
3140 3679 5.565509 TGGGTTCATACTTTCAATAGTGCA 58.434 37.500 0.00 0.00 0.00 4.57
3141 3680 6.007076 TGGGTTCATACTTTCAATAGTGCAA 58.993 36.000 0.00 0.00 0.00 4.08
3142 3681 6.491745 TGGGTTCATACTTTCAATAGTGCAAA 59.508 34.615 0.00 0.00 0.00 3.68
3143 3682 7.178274 TGGGTTCATACTTTCAATAGTGCAAAT 59.822 33.333 0.00 0.00 0.00 2.32
3144 3683 8.034804 GGGTTCATACTTTCAATAGTGCAAATT 58.965 33.333 0.00 0.00 0.00 1.82
3145 3684 9.076596 GGTTCATACTTTCAATAGTGCAAATTC 57.923 33.333 0.00 0.00 0.00 2.17
3146 3685 9.846248 GTTCATACTTTCAATAGTGCAAATTCT 57.154 29.630 0.00 0.00 0.00 2.40
3148 3687 9.453572 TCATACTTTCAATAGTGCAAATTCTCT 57.546 29.630 0.00 0.00 0.00 3.10
3149 3688 9.713740 CATACTTTCAATAGTGCAAATTCTCTC 57.286 33.333 0.00 0.00 0.00 3.20
3150 3689 7.750229 ACTTTCAATAGTGCAAATTCTCTCA 57.250 32.000 0.00 0.00 0.00 3.27
3151 3690 8.169977 ACTTTCAATAGTGCAAATTCTCTCAA 57.830 30.769 0.00 0.00 0.00 3.02
3152 3691 8.078596 ACTTTCAATAGTGCAAATTCTCTCAAC 58.921 33.333 0.00 0.00 0.00 3.18
3153 3692 7.509141 TTCAATAGTGCAAATTCTCTCAACA 57.491 32.000 0.00 0.00 0.00 3.33
3154 3693 7.509141 TCAATAGTGCAAATTCTCTCAACAA 57.491 32.000 0.00 0.00 0.00 2.83
3155 3694 8.114331 TCAATAGTGCAAATTCTCTCAACAAT 57.886 30.769 0.00 0.00 0.00 2.71
3156 3695 9.230122 TCAATAGTGCAAATTCTCTCAACAATA 57.770 29.630 0.00 0.00 0.00 1.90
3157 3696 9.844790 CAATAGTGCAAATTCTCTCAACAATAA 57.155 29.630 0.00 0.00 0.00 1.40
3161 3700 9.846248 AGTGCAAATTCTCTCAACAATAATAAC 57.154 29.630 0.00 0.00 0.00 1.89
3162 3701 9.624697 GTGCAAATTCTCTCAACAATAATAACA 57.375 29.630 0.00 0.00 0.00 2.41
3186 3725 9.479549 ACATAATTGGATCACATAATTATCCCC 57.520 33.333 0.00 0.00 38.76 4.81
3187 3726 8.917088 CATAATTGGATCACATAATTATCCCCC 58.083 37.037 0.00 0.00 38.76 5.40
3188 3727 5.939318 TTGGATCACATAATTATCCCCCA 57.061 39.130 0.00 0.00 38.76 4.96
3189 3728 5.939318 TGGATCACATAATTATCCCCCAA 57.061 39.130 0.00 0.00 38.76 4.12
3190 3729 5.640147 TGGATCACATAATTATCCCCCAAC 58.360 41.667 0.00 0.00 38.76 3.77
3191 3730 5.135191 TGGATCACATAATTATCCCCCAACA 59.865 40.000 0.00 0.00 38.76 3.33
3192 3731 6.183361 TGGATCACATAATTATCCCCCAACAT 60.183 38.462 0.00 0.00 38.76 2.71
3193 3732 6.153340 GGATCACATAATTATCCCCCAACATG 59.847 42.308 0.00 0.00 34.30 3.21
3194 3733 4.832266 TCACATAATTATCCCCCAACATGC 59.168 41.667 0.00 0.00 0.00 4.06
3195 3734 4.588106 CACATAATTATCCCCCAACATGCA 59.412 41.667 0.00 0.00 0.00 3.96
3196 3735 5.070180 CACATAATTATCCCCCAACATGCAA 59.930 40.000 0.00 0.00 0.00 4.08
3197 3736 5.070313 ACATAATTATCCCCCAACATGCAAC 59.930 40.000 0.00 0.00 0.00 4.17
3198 3737 2.612285 TTATCCCCCAACATGCAACA 57.388 45.000 0.00 0.00 0.00 3.33
3199 3738 2.612285 TATCCCCCAACATGCAACAA 57.388 45.000 0.00 0.00 0.00 2.83
3200 3739 1.727062 ATCCCCCAACATGCAACAAA 58.273 45.000 0.00 0.00 0.00 2.83
3201 3740 1.047002 TCCCCCAACATGCAACAAAG 58.953 50.000 0.00 0.00 0.00 2.77
3202 3741 1.047002 CCCCCAACATGCAACAAAGA 58.953 50.000 0.00 0.00 0.00 2.52
3203 3742 1.001181 CCCCCAACATGCAACAAAGAG 59.999 52.381 0.00 0.00 0.00 2.85
3204 3743 1.688197 CCCCAACATGCAACAAAGAGT 59.312 47.619 0.00 0.00 0.00 3.24
3205 3744 2.288395 CCCCAACATGCAACAAAGAGTC 60.288 50.000 0.00 0.00 0.00 3.36
3206 3745 2.361757 CCCAACATGCAACAAAGAGTCA 59.638 45.455 0.00 0.00 0.00 3.41
3207 3746 3.374745 CCAACATGCAACAAAGAGTCAC 58.625 45.455 0.00 0.00 0.00 3.67
3208 3747 3.067180 CCAACATGCAACAAAGAGTCACT 59.933 43.478 0.00 0.00 0.00 3.41
3209 3748 4.285292 CAACATGCAACAAAGAGTCACTC 58.715 43.478 0.00 0.00 0.00 3.51
3210 3749 2.880890 ACATGCAACAAAGAGTCACTCC 59.119 45.455 0.00 0.00 0.00 3.85
3211 3750 2.708216 TGCAACAAAGAGTCACTCCA 57.292 45.000 0.00 0.00 0.00 3.86
3212 3751 2.997980 TGCAACAAAGAGTCACTCCAA 58.002 42.857 0.00 0.00 0.00 3.53
3213 3752 3.351740 TGCAACAAAGAGTCACTCCAAA 58.648 40.909 0.00 0.00 0.00 3.28
3214 3753 3.378112 TGCAACAAAGAGTCACTCCAAAG 59.622 43.478 0.00 0.00 0.00 2.77
3215 3754 3.378427 GCAACAAAGAGTCACTCCAAAGT 59.622 43.478 0.00 0.00 35.60 2.66
3216 3755 4.496507 GCAACAAAGAGTCACTCCAAAGTC 60.497 45.833 0.00 0.00 31.71 3.01
3217 3756 4.487714 ACAAAGAGTCACTCCAAAGTCA 57.512 40.909 0.00 0.00 31.71 3.41
3218 3757 4.192317 ACAAAGAGTCACTCCAAAGTCAC 58.808 43.478 0.00 0.00 31.71 3.67
3219 3758 4.080863 ACAAAGAGTCACTCCAAAGTCACT 60.081 41.667 0.00 0.00 39.88 3.41
3220 3759 5.128827 ACAAAGAGTCACTCCAAAGTCACTA 59.871 40.000 0.00 0.00 36.91 2.74
3221 3760 5.871396 AAGAGTCACTCCAAAGTCACTAA 57.129 39.130 0.00 0.00 36.91 2.24
3222 3761 6.426646 AAGAGTCACTCCAAAGTCACTAAT 57.573 37.500 0.00 0.00 36.91 1.73
3223 3762 7.540474 AAGAGTCACTCCAAAGTCACTAATA 57.460 36.000 0.00 0.00 36.91 0.98
3224 3763 7.164230 AGAGTCACTCCAAAGTCACTAATAG 57.836 40.000 0.00 0.00 36.91 1.73
3225 3764 5.725362 AGTCACTCCAAAGTCACTAATAGC 58.275 41.667 0.00 0.00 34.73 2.97
3226 3765 4.563184 GTCACTCCAAAGTCACTAATAGCG 59.437 45.833 0.00 0.00 31.71 4.26
3227 3766 3.865745 CACTCCAAAGTCACTAATAGCGG 59.134 47.826 0.00 0.00 31.71 5.52
3228 3767 3.767673 ACTCCAAAGTCACTAATAGCGGA 59.232 43.478 0.00 0.00 0.00 5.54
3229 3768 4.142138 ACTCCAAAGTCACTAATAGCGGAG 60.142 45.833 0.00 0.00 42.58 4.63
3230 3769 4.021229 TCCAAAGTCACTAATAGCGGAGA 58.979 43.478 0.00 0.00 0.00 3.71
3231 3770 4.464951 TCCAAAGTCACTAATAGCGGAGAA 59.535 41.667 0.00 0.00 0.00 2.87
3232 3771 4.567159 CCAAAGTCACTAATAGCGGAGAAC 59.433 45.833 0.00 0.00 0.00 3.01
3233 3772 5.168569 CAAAGTCACTAATAGCGGAGAACA 58.831 41.667 0.00 0.00 0.00 3.18
3234 3773 5.401531 AAGTCACTAATAGCGGAGAACAA 57.598 39.130 0.00 0.00 0.00 2.83
3235 3774 5.401531 AGTCACTAATAGCGGAGAACAAA 57.598 39.130 0.00 0.00 0.00 2.83
3236 3775 5.978814 AGTCACTAATAGCGGAGAACAAAT 58.021 37.500 0.00 0.00 0.00 2.32
3237 3776 5.812642 AGTCACTAATAGCGGAGAACAAATG 59.187 40.000 0.00 0.00 0.00 2.32
3238 3777 5.810587 GTCACTAATAGCGGAGAACAAATGA 59.189 40.000 0.00 0.00 0.00 2.57
3239 3778 6.312918 GTCACTAATAGCGGAGAACAAATGAA 59.687 38.462 0.00 0.00 0.00 2.57
3240 3779 6.535150 TCACTAATAGCGGAGAACAAATGAAG 59.465 38.462 0.00 0.00 0.00 3.02
3241 3780 6.535150 CACTAATAGCGGAGAACAAATGAAGA 59.465 38.462 0.00 0.00 0.00 2.87
3242 3781 6.758886 ACTAATAGCGGAGAACAAATGAAGAG 59.241 38.462 0.00 0.00 0.00 2.85
3243 3782 3.685139 AGCGGAGAACAAATGAAGAGA 57.315 42.857 0.00 0.00 0.00 3.10
3244 3783 4.213564 AGCGGAGAACAAATGAAGAGAT 57.786 40.909 0.00 0.00 0.00 2.75
3245 3784 4.583871 AGCGGAGAACAAATGAAGAGATT 58.416 39.130 0.00 0.00 0.00 2.40
3246 3785 5.734720 AGCGGAGAACAAATGAAGAGATTA 58.265 37.500 0.00 0.00 0.00 1.75
3247 3786 6.352516 AGCGGAGAACAAATGAAGAGATTAT 58.647 36.000 0.00 0.00 0.00 1.28
3248 3787 6.259608 AGCGGAGAACAAATGAAGAGATTATG 59.740 38.462 0.00 0.00 0.00 1.90
3249 3788 6.512415 GCGGAGAACAAATGAAGAGATTATGG 60.512 42.308 0.00 0.00 0.00 2.74
3250 3789 6.540189 CGGAGAACAAATGAAGAGATTATGGT 59.460 38.462 0.00 0.00 0.00 3.55
3251 3790 7.710907 CGGAGAACAAATGAAGAGATTATGGTA 59.289 37.037 0.00 0.00 0.00 3.25
3252 3791 9.050601 GGAGAACAAATGAAGAGATTATGGTAG 57.949 37.037 0.00 0.00 0.00 3.18
3253 3792 8.970859 AGAACAAATGAAGAGATTATGGTAGG 57.029 34.615 0.00 0.00 0.00 3.18
3254 3793 8.772250 AGAACAAATGAAGAGATTATGGTAGGA 58.228 33.333 0.00 0.00 0.00 2.94
3255 3794 9.566432 GAACAAATGAAGAGATTATGGTAGGAT 57.434 33.333 0.00 0.00 0.00 3.24
3258 3797 9.144747 CAAATGAAGAGATTATGGTAGGATACG 57.855 37.037 0.00 0.00 44.28 3.06
3259 3798 8.651589 AATGAAGAGATTATGGTAGGATACGA 57.348 34.615 0.00 0.00 44.28 3.43
3260 3799 8.651589 ATGAAGAGATTATGGTAGGATACGAA 57.348 34.615 0.00 0.00 44.28 3.85
3261 3800 8.473358 TGAAGAGATTATGGTAGGATACGAAA 57.527 34.615 0.00 0.00 44.28 3.46
3262 3801 8.358148 TGAAGAGATTATGGTAGGATACGAAAC 58.642 37.037 0.00 0.00 44.28 2.78
3263 3802 7.229581 AGAGATTATGGTAGGATACGAAACC 57.770 40.000 0.00 0.00 44.28 3.27
3265 3804 6.756221 AGATTATGGTAGGATACGAAACCAC 58.244 40.000 2.36 0.00 46.65 4.16
3266 3805 3.832615 ATGGTAGGATACGAAACCACC 57.167 47.619 2.36 0.00 46.65 4.61
3267 3806 2.823959 TGGTAGGATACGAAACCACCT 58.176 47.619 0.00 0.00 44.28 4.00
3268 3807 2.762327 TGGTAGGATACGAAACCACCTC 59.238 50.000 0.00 0.00 44.28 3.85
3269 3808 2.762327 GGTAGGATACGAAACCACCTCA 59.238 50.000 0.00 0.00 44.28 3.86
3270 3809 3.196254 GGTAGGATACGAAACCACCTCAA 59.804 47.826 0.00 0.00 44.28 3.02
3271 3810 4.322953 GGTAGGATACGAAACCACCTCAAA 60.323 45.833 0.00 0.00 44.28 2.69
3272 3811 3.939066 AGGATACGAAACCACCTCAAAG 58.061 45.455 0.00 0.00 46.39 2.77
3273 3812 3.326880 AGGATACGAAACCACCTCAAAGT 59.673 43.478 0.00 0.00 46.39 2.66
3274 3813 4.070009 GGATACGAAACCACCTCAAAGTT 58.930 43.478 0.00 0.00 0.00 2.66
3275 3814 5.012354 AGGATACGAAACCACCTCAAAGTTA 59.988 40.000 0.00 0.00 46.39 2.24
3276 3815 5.878669 GGATACGAAACCACCTCAAAGTTAT 59.121 40.000 0.00 0.00 0.00 1.89
3277 3816 6.373495 GGATACGAAACCACCTCAAAGTTATT 59.627 38.462 0.00 0.00 0.00 1.40
3278 3817 5.684550 ACGAAACCACCTCAAAGTTATTC 57.315 39.130 0.00 0.00 0.00 1.75
3279 3818 5.374071 ACGAAACCACCTCAAAGTTATTCT 58.626 37.500 0.00 0.00 0.00 2.40
3280 3819 5.826208 ACGAAACCACCTCAAAGTTATTCTT 59.174 36.000 0.00 0.00 38.10 2.52
3281 3820 6.320418 ACGAAACCACCTCAAAGTTATTCTTT 59.680 34.615 0.00 0.00 45.96 2.52
3282 3821 6.856426 CGAAACCACCTCAAAGTTATTCTTTC 59.144 38.462 0.00 0.00 43.57 2.62
3283 3822 7.255139 CGAAACCACCTCAAAGTTATTCTTTCT 60.255 37.037 0.00 0.00 43.57 2.52
3284 3823 6.884280 ACCACCTCAAAGTTATTCTTTCTG 57.116 37.500 0.00 0.00 43.57 3.02
3285 3824 6.601332 ACCACCTCAAAGTTATTCTTTCTGA 58.399 36.000 0.00 0.00 43.57 3.27
3286 3825 7.234355 ACCACCTCAAAGTTATTCTTTCTGAT 58.766 34.615 0.00 0.00 43.57 2.90
3287 3826 7.391833 ACCACCTCAAAGTTATTCTTTCTGATC 59.608 37.037 0.00 0.00 43.57 2.92
3288 3827 7.413438 CCACCTCAAAGTTATTCTTTCTGATCG 60.413 40.741 0.00 0.00 43.57 3.69
3289 3828 7.331934 CACCTCAAAGTTATTCTTTCTGATCGA 59.668 37.037 0.00 0.00 43.57 3.59
3290 3829 8.043710 ACCTCAAAGTTATTCTTTCTGATCGAT 58.956 33.333 0.00 0.00 43.57 3.59
3291 3830 8.547069 CCTCAAAGTTATTCTTTCTGATCGATC 58.453 37.037 18.72 18.72 43.57 3.69
3292 3831 9.311916 CTCAAAGTTATTCTTTCTGATCGATCT 57.688 33.333 25.02 5.91 43.57 2.75
3301 3840 9.695526 ATTCTTTCTGATCGATCTATTCAAGAG 57.304 33.333 25.02 12.07 37.74 2.85
3302 3841 8.231692 TCTTTCTGATCGATCTATTCAAGAGT 57.768 34.615 25.02 0.00 37.74 3.24
3303 3842 8.349245 TCTTTCTGATCGATCTATTCAAGAGTC 58.651 37.037 25.02 0.00 37.74 3.36
3304 3843 6.567687 TCTGATCGATCTATTCAAGAGTCC 57.432 41.667 25.02 0.00 37.74 3.85
3305 3844 5.180304 TCTGATCGATCTATTCAAGAGTCCG 59.820 44.000 25.02 0.00 37.74 4.79
3306 3845 4.822350 TGATCGATCTATTCAAGAGTCCGT 59.178 41.667 25.02 0.00 37.74 4.69
3307 3846 5.995897 TGATCGATCTATTCAAGAGTCCGTA 59.004 40.000 25.02 0.00 37.74 4.02
3308 3847 5.926214 TCGATCTATTCAAGAGTCCGTAG 57.074 43.478 0.00 0.00 37.74 3.51
3309 3848 5.366460 TCGATCTATTCAAGAGTCCGTAGT 58.634 41.667 0.00 0.00 37.74 2.73
3310 3849 6.519382 TCGATCTATTCAAGAGTCCGTAGTA 58.481 40.000 0.00 0.00 37.74 1.82
3311 3850 6.988580 TCGATCTATTCAAGAGTCCGTAGTAA 59.011 38.462 0.00 0.00 37.74 2.24
3312 3851 7.496920 TCGATCTATTCAAGAGTCCGTAGTAAA 59.503 37.037 0.00 0.00 37.74 2.01
3313 3852 8.127327 CGATCTATTCAAGAGTCCGTAGTAAAA 58.873 37.037 0.00 0.00 37.74 1.52
3314 3853 9.968870 GATCTATTCAAGAGTCCGTAGTAAAAT 57.031 33.333 0.00 0.00 37.74 1.82
3319 3858 9.886132 ATTCAAGAGTCCGTAGTAAAATAACAT 57.114 29.630 0.00 0.00 0.00 2.71
3320 3859 8.697846 TCAAGAGTCCGTAGTAAAATAACATG 57.302 34.615 0.00 0.00 0.00 3.21
3321 3860 8.525316 TCAAGAGTCCGTAGTAAAATAACATGA 58.475 33.333 0.00 0.00 0.00 3.07
3322 3861 9.146984 CAAGAGTCCGTAGTAAAATAACATGAA 57.853 33.333 0.00 0.00 0.00 2.57
3323 3862 8.928270 AGAGTCCGTAGTAAAATAACATGAAG 57.072 34.615 0.00 0.00 0.00 3.02
3324 3863 7.491696 AGAGTCCGTAGTAAAATAACATGAAGC 59.508 37.037 0.00 0.00 0.00 3.86
3325 3864 7.328737 AGTCCGTAGTAAAATAACATGAAGCT 58.671 34.615 0.00 0.00 0.00 3.74
3326 3865 8.472413 AGTCCGTAGTAAAATAACATGAAGCTA 58.528 33.333 0.00 0.00 0.00 3.32
3327 3866 9.257651 GTCCGTAGTAAAATAACATGAAGCTAT 57.742 33.333 0.00 0.00 0.00 2.97
3328 3867 9.826574 TCCGTAGTAAAATAACATGAAGCTATT 57.173 29.630 0.00 0.00 0.00 1.73
3336 3875 7.865706 AATAACATGAAGCTATTCTTTCCGT 57.134 32.000 0.00 0.00 36.33 4.69
3337 3876 7.865706 ATAACATGAAGCTATTCTTTCCGTT 57.134 32.000 0.00 0.00 36.33 4.44
3338 3877 5.803020 ACATGAAGCTATTCTTTCCGTTC 57.197 39.130 0.00 0.00 36.33 3.95
3339 3878 5.245531 ACATGAAGCTATTCTTTCCGTTCA 58.754 37.500 0.00 0.00 36.33 3.18
3340 3879 5.705441 ACATGAAGCTATTCTTTCCGTTCAA 59.295 36.000 0.00 0.00 36.33 2.69
3341 3880 6.375455 ACATGAAGCTATTCTTTCCGTTCAAT 59.625 34.615 0.00 0.00 36.33 2.57
3342 3881 6.422776 TGAAGCTATTCTTTCCGTTCAATC 57.577 37.500 0.00 0.00 36.33 2.67
3343 3882 6.173339 TGAAGCTATTCTTTCCGTTCAATCT 58.827 36.000 0.00 0.00 36.33 2.40
3344 3883 7.327975 TGAAGCTATTCTTTCCGTTCAATCTA 58.672 34.615 0.00 0.00 36.33 1.98
3345 3884 7.987458 TGAAGCTATTCTTTCCGTTCAATCTAT 59.013 33.333 0.00 0.00 36.33 1.98
3346 3885 7.954788 AGCTATTCTTTCCGTTCAATCTATC 57.045 36.000 0.00 0.00 0.00 2.08
3347 3886 6.931840 AGCTATTCTTTCCGTTCAATCTATCC 59.068 38.462 0.00 0.00 0.00 2.59
3348 3887 6.931840 GCTATTCTTTCCGTTCAATCTATCCT 59.068 38.462 0.00 0.00 0.00 3.24
3349 3888 8.088981 GCTATTCTTTCCGTTCAATCTATCCTA 58.911 37.037 0.00 0.00 0.00 2.94
3350 3889 9.632807 CTATTCTTTCCGTTCAATCTATCCTAG 57.367 37.037 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.622260 ACATGGCAAATGCTAGGTTTTT 57.378 36.364 3.15 0.00 43.74 1.94
22 23 3.443329 TGTACAACATGGCAAATGCTAGG 59.557 43.478 5.25 3.47 41.70 3.02
23 24 4.700268 TGTACAACATGGCAAATGCTAG 57.300 40.909 5.25 0.00 41.70 3.42
24 25 5.459536 TTTGTACAACATGGCAAATGCTA 57.540 34.783 8.07 0.00 41.70 3.49
25 26 4.333913 TTTGTACAACATGGCAAATGCT 57.666 36.364 8.07 0.00 41.70 3.79
26 27 5.007528 ACTTTTTGTACAACATGGCAAATGC 59.992 36.000 8.07 0.00 41.14 3.56
27 28 6.601741 ACTTTTTGTACAACATGGCAAATG 57.398 33.333 8.07 3.41 30.78 2.32
28 29 6.458070 GCAACTTTTTGTACAACATGGCAAAT 60.458 34.615 8.07 0.00 34.90 2.32
29 30 5.163814 GCAACTTTTTGTACAACATGGCAAA 60.164 36.000 8.07 4.36 34.90 3.68
30 31 4.331168 GCAACTTTTTGTACAACATGGCAA 59.669 37.500 8.07 0.00 34.90 4.52
31 32 3.868077 GCAACTTTTTGTACAACATGGCA 59.132 39.130 8.07 0.00 34.90 4.92
32 33 3.247411 GGCAACTTTTTGTACAACATGGC 59.753 43.478 8.07 11.09 34.90 4.40
33 34 4.437239 TGGCAACTTTTTGTACAACATGG 58.563 39.130 8.07 1.95 34.90 3.66
34 35 6.922957 ACTATGGCAACTTTTTGTACAACATG 59.077 34.615 8.07 6.94 34.90 3.21
35 36 7.049799 ACTATGGCAACTTTTTGTACAACAT 57.950 32.000 8.07 8.36 34.90 2.71
36 37 6.458232 ACTATGGCAACTTTTTGTACAACA 57.542 33.333 8.07 0.00 34.90 3.33
37 38 5.918576 GGACTATGGCAACTTTTTGTACAAC 59.081 40.000 8.07 0.00 34.90 3.32
38 39 5.594725 TGGACTATGGCAACTTTTTGTACAA 59.405 36.000 3.59 3.59 34.90 2.41
39 40 5.133941 TGGACTATGGCAACTTTTTGTACA 58.866 37.500 0.00 0.00 34.90 2.90
40 41 5.699097 TGGACTATGGCAACTTTTTGTAC 57.301 39.130 0.00 0.00 34.90 2.90
41 42 6.716934 TTTGGACTATGGCAACTTTTTGTA 57.283 33.333 0.00 0.00 34.90 2.41
42 43 5.606348 TTTGGACTATGGCAACTTTTTGT 57.394 34.783 0.00 0.00 34.90 2.83
43 44 6.917217 TTTTTGGACTATGGCAACTTTTTG 57.083 33.333 0.00 0.00 35.62 2.44
44 45 9.620259 TTTATTTTTGGACTATGGCAACTTTTT 57.380 25.926 0.00 0.00 37.61 1.94
45 46 9.271828 CTTTATTTTTGGACTATGGCAACTTTT 57.728 29.630 0.00 0.00 37.61 2.27
46 47 7.877612 CCTTTATTTTTGGACTATGGCAACTTT 59.122 33.333 0.00 0.00 37.61 2.66
47 48 7.386059 CCTTTATTTTTGGACTATGGCAACTT 58.614 34.615 0.00 0.00 37.61 2.66
48 49 6.070824 CCCTTTATTTTTGGACTATGGCAACT 60.071 38.462 0.00 0.00 37.61 3.16
49 50 6.106003 CCCTTTATTTTTGGACTATGGCAAC 58.894 40.000 0.00 0.00 0.00 4.17
50 51 5.782845 ACCCTTTATTTTTGGACTATGGCAA 59.217 36.000 0.00 0.00 0.00 4.52
51 52 5.337788 ACCCTTTATTTTTGGACTATGGCA 58.662 37.500 0.00 0.00 0.00 4.92
52 53 5.932619 ACCCTTTATTTTTGGACTATGGC 57.067 39.130 0.00 0.00 0.00 4.40
92 93 6.097981 ACATTTTTGGTTTGCATGGGATTTTT 59.902 30.769 0.00 0.00 0.00 1.94
93 94 5.597594 ACATTTTTGGTTTGCATGGGATTTT 59.402 32.000 0.00 0.00 0.00 1.82
94 95 5.009811 CACATTTTTGGTTTGCATGGGATTT 59.990 36.000 0.00 0.00 0.00 2.17
95 96 4.519730 CACATTTTTGGTTTGCATGGGATT 59.480 37.500 0.00 0.00 0.00 3.01
96 97 4.073549 CACATTTTTGGTTTGCATGGGAT 58.926 39.130 0.00 0.00 0.00 3.85
97 98 3.135348 TCACATTTTTGGTTTGCATGGGA 59.865 39.130 0.00 0.00 0.00 4.37
98 99 3.474600 TCACATTTTTGGTTTGCATGGG 58.525 40.909 0.00 0.00 0.00 4.00
99 100 6.988622 ATATCACATTTTTGGTTTGCATGG 57.011 33.333 0.00 0.00 0.00 3.66
100 101 8.259049 AGAATATCACATTTTTGGTTTGCATG 57.741 30.769 0.00 0.00 0.00 4.06
101 102 8.851541 AAGAATATCACATTTTTGGTTTGCAT 57.148 26.923 0.00 0.00 0.00 3.96
102 103 8.674263 AAAGAATATCACATTTTTGGTTTGCA 57.326 26.923 0.00 0.00 0.00 4.08
131 132 6.999871 AGATCTTTTTGACCATGGCAATTTTT 59.000 30.769 13.04 2.36 0.00 1.94
132 133 6.536447 AGATCTTTTTGACCATGGCAATTTT 58.464 32.000 13.04 0.00 0.00 1.82
133 134 6.117975 AGATCTTTTTGACCATGGCAATTT 57.882 33.333 13.04 0.00 0.00 1.82
134 135 5.750352 AGATCTTTTTGACCATGGCAATT 57.250 34.783 13.04 0.00 0.00 2.32
135 136 5.750352 AAGATCTTTTTGACCATGGCAAT 57.250 34.783 13.04 1.83 0.00 3.56
136 137 5.299148 CAAAGATCTTTTTGACCATGGCAA 58.701 37.500 18.16 14.28 39.79 4.52
137 138 4.262549 CCAAAGATCTTTTTGACCATGGCA 60.263 41.667 18.16 8.31 39.79 4.92
138 139 4.248058 CCAAAGATCTTTTTGACCATGGC 58.752 43.478 18.16 5.35 39.79 4.40
139 140 5.473066 ACCAAAGATCTTTTTGACCATGG 57.527 39.130 18.16 15.93 39.79 3.66
140 141 7.063780 GCATAACCAAAGATCTTTTTGACCATG 59.936 37.037 18.16 15.65 39.79 3.66
141 142 7.099120 GCATAACCAAAGATCTTTTTGACCAT 58.901 34.615 18.16 4.78 39.79 3.55
142 143 6.041409 TGCATAACCAAAGATCTTTTTGACCA 59.959 34.615 18.16 7.18 39.79 4.02
143 144 6.454795 TGCATAACCAAAGATCTTTTTGACC 58.545 36.000 18.16 4.87 39.79 4.02
144 145 7.945033 TTGCATAACCAAAGATCTTTTTGAC 57.055 32.000 18.16 5.38 39.79 3.18
145 146 7.603404 CCATTGCATAACCAAAGATCTTTTTGA 59.397 33.333 18.16 2.21 39.79 2.69
146 147 7.624764 GCCATTGCATAACCAAAGATCTTTTTG 60.625 37.037 18.16 14.17 36.36 2.44
147 148 6.372381 GCCATTGCATAACCAAAGATCTTTTT 59.628 34.615 18.16 13.22 37.47 1.94
148 149 5.876460 GCCATTGCATAACCAAAGATCTTTT 59.124 36.000 18.16 7.02 37.47 2.27
149 150 5.046448 TGCCATTGCATAACCAAAGATCTTT 60.046 36.000 15.11 15.11 44.23 2.52
150 151 4.467082 TGCCATTGCATAACCAAAGATCTT 59.533 37.500 0.88 0.88 44.23 2.40
151 152 4.025360 TGCCATTGCATAACCAAAGATCT 58.975 39.130 0.00 0.00 44.23 2.75
152 153 4.389890 TGCCATTGCATAACCAAAGATC 57.610 40.909 0.00 0.00 44.23 2.75
184 185 6.334102 ACAATGCAAATTGCCATGATTTTT 57.666 29.167 21.41 2.02 44.23 1.94
185 186 5.968528 ACAATGCAAATTGCCATGATTTT 57.031 30.435 21.41 4.79 44.23 1.82
186 187 5.063691 CGTACAATGCAAATTGCCATGATTT 59.936 36.000 21.41 6.90 44.23 2.17
187 188 4.567558 CGTACAATGCAAATTGCCATGATT 59.432 37.500 21.41 10.33 44.23 2.57
188 189 4.114073 CGTACAATGCAAATTGCCATGAT 58.886 39.130 21.41 5.12 44.23 2.45
189 190 3.056962 ACGTACAATGCAAATTGCCATGA 60.057 39.130 21.41 2.99 44.23 3.07
190 191 3.061028 CACGTACAATGCAAATTGCCATG 59.939 43.478 15.98 15.67 44.23 3.66
191 192 3.252400 CACGTACAATGCAAATTGCCAT 58.748 40.909 15.98 6.31 44.23 4.40
192 193 2.608998 CCACGTACAATGCAAATTGCCA 60.609 45.455 15.98 4.07 44.23 4.92
193 194 1.991965 CCACGTACAATGCAAATTGCC 59.008 47.619 15.98 0.00 44.23 4.52
194 195 2.408032 CACCACGTACAATGCAAATTGC 59.592 45.455 11.58 11.58 45.29 3.56
195 196 2.985809 CCACCACGTACAATGCAAATTG 59.014 45.455 0.00 0.00 37.54 2.32
196 197 2.609244 GCCACCACGTACAATGCAAATT 60.609 45.455 0.00 0.00 0.00 1.82
197 198 1.067915 GCCACCACGTACAATGCAAAT 60.068 47.619 0.00 0.00 0.00 2.32
198 199 0.312416 GCCACCACGTACAATGCAAA 59.688 50.000 0.00 0.00 0.00 3.68
199 200 0.819666 TGCCACCACGTACAATGCAA 60.820 50.000 0.00 0.00 0.00 4.08
200 201 0.819666 TTGCCACCACGTACAATGCA 60.820 50.000 0.00 0.00 0.00 3.96
201 202 0.312416 TTTGCCACCACGTACAATGC 59.688 50.000 0.00 0.00 0.00 3.56
202 203 2.783828 TTTTGCCACCACGTACAATG 57.216 45.000 0.00 0.00 0.00 2.82
270 271 9.669887 ACATGATGGCAAATTTTAATACACATT 57.330 25.926 0.00 0.00 0.00 2.71
271 272 9.100554 CACATGATGGCAAATTTTAATACACAT 57.899 29.630 0.00 0.00 0.00 3.21
272 273 7.548427 CCACATGATGGCAAATTTTAATACACA 59.452 33.333 0.00 0.00 43.24 3.72
273 274 7.908230 CCACATGATGGCAAATTTTAATACAC 58.092 34.615 0.00 0.00 43.24 2.90
288 289 4.796946 CACCTTTTGTGTTCCACATGATGG 60.797 45.833 0.00 3.67 44.16 3.51
289 290 4.300803 CACCTTTTGTGTTCCACATGATG 58.699 43.478 0.00 0.00 44.16 3.07
290 291 4.589216 CACCTTTTGTGTTCCACATGAT 57.411 40.909 0.00 0.00 44.16 2.45
302 303 6.603940 AACAATATATGGTGCACCTTTTGT 57.396 33.333 34.75 28.52 36.82 2.83
303 304 9.598517 AATAAACAATATATGGTGCACCTTTTG 57.401 29.630 34.75 27.95 36.82 2.44
330 331 8.447833 GCAGCGGCAATTATACATTACTAATAA 58.552 33.333 3.18 0.00 40.72 1.40
331 332 7.065324 GGCAGCGGCAATTATACATTACTAATA 59.935 37.037 11.88 0.00 43.71 0.98
332 333 6.128007 GGCAGCGGCAATTATACATTACTAAT 60.128 38.462 11.88 0.00 43.71 1.73
333 334 5.180492 GGCAGCGGCAATTATACATTACTAA 59.820 40.000 11.88 0.00 43.71 2.24
334 335 4.693566 GGCAGCGGCAATTATACATTACTA 59.306 41.667 11.88 0.00 43.71 1.82
335 336 3.502211 GGCAGCGGCAATTATACATTACT 59.498 43.478 11.88 0.00 43.71 2.24
336 337 3.252215 TGGCAGCGGCAATTATACATTAC 59.748 43.478 11.88 0.00 43.71 1.89
337 338 3.481453 TGGCAGCGGCAATTATACATTA 58.519 40.909 11.88 0.00 43.71 1.90
338 339 2.305928 TGGCAGCGGCAATTATACATT 58.694 42.857 11.88 0.00 43.71 2.71
339 340 1.979855 TGGCAGCGGCAATTATACAT 58.020 45.000 11.88 0.00 43.71 2.29
340 341 1.608109 CATGGCAGCGGCAATTATACA 59.392 47.619 11.88 0.00 42.43 2.29
341 342 1.608590 ACATGGCAGCGGCAATTATAC 59.391 47.619 11.88 0.00 42.43 1.47
411 412 2.203266 GGATGCAGGCTGTAGGGC 60.203 66.667 17.16 1.00 41.20 5.19
487 488 0.903236 GAGGGAGGAGGCGTACTTTT 59.097 55.000 0.00 0.00 0.00 2.27
517 519 3.126729 GCGTGGAGGCGTACTTTAA 57.873 52.632 0.00 0.00 0.00 1.52
540 542 1.544724 AGAAATAAAAGGGCAGCGCA 58.455 45.000 11.47 0.00 0.00 6.09
554 556 5.954150 AGAGAGAGAGCAGAGAAGAAGAAAT 59.046 40.000 0.00 0.00 0.00 2.17
562 564 3.776969 AGAGAGAGAGAGAGAGCAGAGAA 59.223 47.826 0.00 0.00 0.00 2.87
566 568 3.387374 AGAGAGAGAGAGAGAGAGAGCAG 59.613 52.174 0.00 0.00 0.00 4.24
567 569 3.378512 AGAGAGAGAGAGAGAGAGAGCA 58.621 50.000 0.00 0.00 0.00 4.26
568 570 3.640967 AGAGAGAGAGAGAGAGAGAGAGC 59.359 52.174 0.00 0.00 0.00 4.09
571 573 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
572 574 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
574 576 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
575 577 4.501229 GCAGAGAGAGAGAGAGAGAGAGAG 60.501 54.167 0.00 0.00 0.00 3.20
576 578 3.386078 GCAGAGAGAGAGAGAGAGAGAGA 59.614 52.174 0.00 0.00 0.00 3.10
577 579 3.387374 AGCAGAGAGAGAGAGAGAGAGAG 59.613 52.174 0.00 0.00 0.00 3.20
578 580 3.378512 AGCAGAGAGAGAGAGAGAGAGA 58.621 50.000 0.00 0.00 0.00 3.10
579 581 3.834489 AGCAGAGAGAGAGAGAGAGAG 57.166 52.381 0.00 0.00 0.00 3.20
580 582 3.877559 CAAGCAGAGAGAGAGAGAGAGA 58.122 50.000 0.00 0.00 0.00 3.10
581 583 2.357009 GCAAGCAGAGAGAGAGAGAGAG 59.643 54.545 0.00 0.00 0.00 3.20
582 584 2.025981 AGCAAGCAGAGAGAGAGAGAGA 60.026 50.000 0.00 0.00 0.00 3.10
583 585 2.098607 CAGCAAGCAGAGAGAGAGAGAG 59.901 54.545 0.00 0.00 0.00 3.20
584 586 2.093890 CAGCAAGCAGAGAGAGAGAGA 58.906 52.381 0.00 0.00 0.00 3.10
585 587 1.135527 CCAGCAAGCAGAGAGAGAGAG 59.864 57.143 0.00 0.00 0.00 3.20
586 588 1.184431 CCAGCAAGCAGAGAGAGAGA 58.816 55.000 0.00 0.00 0.00 3.10
587 589 0.460635 GCCAGCAAGCAGAGAGAGAG 60.461 60.000 0.00 0.00 0.00 3.20
588 590 1.595882 GCCAGCAAGCAGAGAGAGA 59.404 57.895 0.00 0.00 0.00 3.10
589 591 1.810441 CGCCAGCAAGCAGAGAGAG 60.810 63.158 0.00 0.00 0.00 3.20
612 614 4.142403 CGAAAGAAAAATATCTGGCCTGCA 60.142 41.667 3.32 0.00 0.00 4.41
633 635 2.485814 CCGAGATGCATACTCTCATCGA 59.514 50.000 14.51 0.00 42.76 3.59
646 648 3.492311 GACGAGGAGGCCGAGATGC 62.492 68.421 0.00 0.00 0.00 3.91
712 717 0.105778 CGATGGAGAAGAGGGGAAGC 59.894 60.000 0.00 0.00 0.00 3.86
734 739 7.411912 CGTCGATTTTCTCAGATAAAAGCTCAA 60.412 37.037 7.45 0.00 31.70 3.02
744 749 4.720649 TCTTCCGTCGATTTTCTCAGAT 57.279 40.909 0.00 0.00 0.00 2.90
747 752 5.529791 GGATATCTTCCGTCGATTTTCTCA 58.470 41.667 2.05 0.00 33.93 3.27
853 858 0.790814 GAAAGAGCGGTTGGACGAAG 59.209 55.000 0.00 0.00 35.47 3.79
910 916 1.214217 CTTCCTACCTCCTTTCCCCC 58.786 60.000 0.00 0.00 0.00 5.40
911 917 1.214217 CCTTCCTACCTCCTTTCCCC 58.786 60.000 0.00 0.00 0.00 4.81
912 918 2.265526 TCCTTCCTACCTCCTTTCCC 57.734 55.000 0.00 0.00 0.00 3.97
913 919 3.054287 CCTTTCCTTCCTACCTCCTTTCC 60.054 52.174 0.00 0.00 0.00 3.13
914 920 3.844804 TCCTTTCCTTCCTACCTCCTTTC 59.155 47.826 0.00 0.00 0.00 2.62
915 921 3.587951 GTCCTTTCCTTCCTACCTCCTTT 59.412 47.826 0.00 0.00 0.00 3.11
916 922 3.181394 AGTCCTTTCCTTCCTACCTCCTT 60.181 47.826 0.00 0.00 0.00 3.36
917 923 2.387510 AGTCCTTTCCTTCCTACCTCCT 59.612 50.000 0.00 0.00 0.00 3.69
918 924 2.502130 CAGTCCTTTCCTTCCTACCTCC 59.498 54.545 0.00 0.00 0.00 4.30
919 925 3.442076 TCAGTCCTTTCCTTCCTACCTC 58.558 50.000 0.00 0.00 0.00 3.85
920 926 3.562108 TCAGTCCTTTCCTTCCTACCT 57.438 47.619 0.00 0.00 0.00 3.08
921 927 4.471747 AGATTCAGTCCTTTCCTTCCTACC 59.528 45.833 0.00 0.00 0.00 3.18
922 928 5.685520 AGATTCAGTCCTTTCCTTCCTAC 57.314 43.478 0.00 0.00 0.00 3.18
923 929 6.476378 CAAAGATTCAGTCCTTTCCTTCCTA 58.524 40.000 0.00 0.00 30.89 2.94
924 930 5.320277 CAAAGATTCAGTCCTTTCCTTCCT 58.680 41.667 0.00 0.00 30.89 3.36
925 931 4.082517 GCAAAGATTCAGTCCTTTCCTTCC 60.083 45.833 0.00 0.00 30.89 3.46
926 932 4.764308 AGCAAAGATTCAGTCCTTTCCTTC 59.236 41.667 0.00 0.00 30.89 3.46
927 933 4.734266 AGCAAAGATTCAGTCCTTTCCTT 58.266 39.130 0.00 0.00 30.89 3.36
928 934 4.379302 AGCAAAGATTCAGTCCTTTCCT 57.621 40.909 0.00 0.00 30.89 3.36
929 935 4.082517 GGAAGCAAAGATTCAGTCCTTTCC 60.083 45.833 0.00 0.00 30.89 3.13
930 936 4.520492 TGGAAGCAAAGATTCAGTCCTTTC 59.480 41.667 0.00 0.00 30.89 2.62
931 937 4.473444 TGGAAGCAAAGATTCAGTCCTTT 58.527 39.130 0.00 0.00 33.29 3.11
932 938 4.104383 TGGAAGCAAAGATTCAGTCCTT 57.896 40.909 0.00 0.00 28.65 3.36
933 939 3.795688 TGGAAGCAAAGATTCAGTCCT 57.204 42.857 0.00 0.00 28.65 3.85
934 940 3.379688 GGATGGAAGCAAAGATTCAGTCC 59.620 47.826 0.00 0.81 30.54 3.85
935 941 4.012374 TGGATGGAAGCAAAGATTCAGTC 58.988 43.478 0.00 0.00 28.65 3.51
936 942 4.038271 TGGATGGAAGCAAAGATTCAGT 57.962 40.909 0.00 0.00 28.65 3.41
947 953 2.291741 GTCCGATGAAATGGATGGAAGC 59.708 50.000 0.00 0.00 36.48 3.86
948 954 3.313526 GTGTCCGATGAAATGGATGGAAG 59.686 47.826 0.00 0.00 36.48 3.46
968 974 8.562892 CAAGAAGAAGCAGGGTATATTTATGTG 58.437 37.037 0.00 0.00 0.00 3.21
976 982 4.039245 CCGATCAAGAAGAAGCAGGGTATA 59.961 45.833 0.00 0.00 0.00 1.47
981 987 2.680312 TCCGATCAAGAAGAAGCAGG 57.320 50.000 0.00 0.00 0.00 4.85
1009 1015 1.234821 GGCTGTTGAATCGTGGACAA 58.765 50.000 0.00 0.00 0.00 3.18
1064 1075 5.403466 GTGAATCAGAAAAACATTCAGGCAC 59.597 40.000 0.00 0.00 37.24 5.01
1072 1083 6.152932 ACTTGCAGTGAATCAGAAAAACAT 57.847 33.333 0.00 0.00 0.00 2.71
1085 1096 4.760530 ATGCTCCTATTACTTGCAGTGA 57.239 40.909 0.00 0.00 37.07 3.41
1094 1105 6.915349 AGTCGAAGTGATATGCTCCTATTAC 58.085 40.000 0.00 0.00 0.00 1.89
1096 1107 6.412362 AAGTCGAAGTGATATGCTCCTATT 57.588 37.500 0.00 0.00 0.00 1.73
1097 1108 7.177568 ACATAAGTCGAAGTGATATGCTCCTAT 59.822 37.037 0.00 0.00 0.00 2.57
1138 1187 9.857656 AGCTAATCAAGGATTTCATTTATCAGA 57.142 29.630 0.00 0.00 33.95 3.27
1140 1189 9.631257 TGAGCTAATCAAGGATTTCATTTATCA 57.369 29.630 0.00 0.00 34.02 2.15
1142 1191 9.638176 ACTGAGCTAATCAAGGATTTCATTTAT 57.362 29.630 0.00 0.00 37.52 1.40
1144 1193 7.951347 ACTGAGCTAATCAAGGATTTCATTT 57.049 32.000 0.00 0.00 37.52 2.32
1145 1194 9.638176 AATACTGAGCTAATCAAGGATTTCATT 57.362 29.630 0.00 0.00 37.52 2.57
1146 1195 9.282569 GAATACTGAGCTAATCAAGGATTTCAT 57.717 33.333 0.00 0.00 37.52 2.57
1147 1196 8.489489 AGAATACTGAGCTAATCAAGGATTTCA 58.511 33.333 0.00 0.00 37.52 2.69
1148 1197 8.900983 AGAATACTGAGCTAATCAAGGATTTC 57.099 34.615 0.00 0.00 37.52 2.17
1149 1198 8.713036 AGAGAATACTGAGCTAATCAAGGATTT 58.287 33.333 0.00 0.00 37.52 2.17
1150 1199 8.261349 AGAGAATACTGAGCTAATCAAGGATT 57.739 34.615 0.00 0.00 37.52 3.01
1151 1200 7.854166 AGAGAATACTGAGCTAATCAAGGAT 57.146 36.000 0.00 0.00 37.52 3.24
1152 1201 7.495901 CAAGAGAATACTGAGCTAATCAAGGA 58.504 38.462 0.00 0.00 37.52 3.36
1153 1202 6.202570 GCAAGAGAATACTGAGCTAATCAAGG 59.797 42.308 0.00 0.00 37.52 3.61
1154 1203 6.760298 TGCAAGAGAATACTGAGCTAATCAAG 59.240 38.462 0.00 0.00 37.52 3.02
1155 1204 6.643388 TGCAAGAGAATACTGAGCTAATCAA 58.357 36.000 0.00 0.00 37.52 2.57
1156 1205 6.225981 TGCAAGAGAATACTGAGCTAATCA 57.774 37.500 0.00 0.00 36.21 2.57
1157 1206 7.727331 ATTGCAAGAGAATACTGAGCTAATC 57.273 36.000 4.94 0.00 0.00 1.75
1158 1207 9.270640 CTAATTGCAAGAGAATACTGAGCTAAT 57.729 33.333 4.94 0.00 0.00 1.73
1159 1208 7.225538 GCTAATTGCAAGAGAATACTGAGCTAA 59.774 37.037 13.87 0.00 42.31 3.09
1160 1209 6.703607 GCTAATTGCAAGAGAATACTGAGCTA 59.296 38.462 13.87 0.00 42.31 3.32
1161 1210 5.526846 GCTAATTGCAAGAGAATACTGAGCT 59.473 40.000 13.87 0.00 42.31 4.09
1162 1211 5.526846 AGCTAATTGCAAGAGAATACTGAGC 59.473 40.000 13.87 4.76 45.94 4.26
1163 1212 6.985645 AGAGCTAATTGCAAGAGAATACTGAG 59.014 38.462 13.87 0.00 45.94 3.35
1164 1213 6.882656 AGAGCTAATTGCAAGAGAATACTGA 58.117 36.000 13.87 0.00 45.94 3.41
1165 1214 7.408123 CAAGAGCTAATTGCAAGAGAATACTG 58.592 38.462 13.87 0.00 45.94 2.74
1166 1215 7.551035 CAAGAGCTAATTGCAAGAGAATACT 57.449 36.000 13.87 2.91 45.94 2.12
1198 1247 4.688879 TCGAGTCGAATTAAACTTGCATGT 59.311 37.500 13.98 0.00 31.06 3.21
1202 1251 6.134061 ACTTTTCGAGTCGAATTAAACTTGC 58.866 36.000 27.26 0.00 45.28 4.01
1230 1279 1.197036 GTACTTTTGCCTGGCTTCGTC 59.803 52.381 21.03 1.04 0.00 4.20
1233 1282 2.623416 ACTTGTACTTTTGCCTGGCTTC 59.377 45.455 21.03 0.00 0.00 3.86
1253 1302 7.377766 TCCATGCAAAATTAAGTCACTAGAC 57.622 36.000 0.00 0.00 45.31 2.59
1256 1640 8.034215 CCATTTCCATGCAAAATTAAGTCACTA 58.966 33.333 0.00 0.00 0.00 2.74
1258 1650 6.873076 TCCATTTCCATGCAAAATTAAGTCAC 59.127 34.615 0.00 0.00 0.00 3.67
1262 1654 8.948145 TCATTTCCATTTCCATGCAAAATTAAG 58.052 29.630 0.00 0.00 28.84 1.85
1310 1702 4.284490 TCGCCCTGCTGAAGAATAAGATAT 59.716 41.667 0.00 0.00 0.00 1.63
1317 1709 1.078143 GGTCGCCCTGCTGAAGAAT 60.078 57.895 0.00 0.00 0.00 2.40
1332 1724 2.222027 CACCAACTCTCCAACTTGGTC 58.778 52.381 7.72 0.00 44.82 4.02
1334 1726 2.222027 GACACCAACTCTCCAACTTGG 58.778 52.381 0.74 0.74 40.40 3.61
1380 1772 3.392285 TCCATGGAGCTTATGTACATGCT 59.608 43.478 18.81 18.31 38.02 3.79
1381 1773 3.743521 TCCATGGAGCTTATGTACATGC 58.256 45.455 18.81 13.80 38.02 4.06
1529 1936 0.813821 TCTCGGACATGAGCTCACTG 59.186 55.000 20.97 19.50 35.90 3.66
1531 1938 0.102120 CCTCTCGGACATGAGCTCAC 59.898 60.000 20.97 6.39 35.90 3.51
1624 2031 3.819564 TGACACCGGAATAATCTCTGG 57.180 47.619 9.46 0.00 46.04 3.86
1627 2034 4.369182 ACGATTGACACCGGAATAATCTC 58.631 43.478 9.46 0.00 0.00 2.75
1643 2050 0.721154 CCACATCACCACGACGATTG 59.279 55.000 0.00 0.00 0.00 2.67
1708 2115 2.956964 GCATCCGAGCCGTCTTCG 60.957 66.667 0.00 0.00 0.00 3.79
1715 2122 1.615883 TCTCTTCTATGCATCCGAGCC 59.384 52.381 0.19 0.00 0.00 4.70
1716 2123 3.243704 ACTTCTCTTCTATGCATCCGAGC 60.244 47.826 0.19 0.00 0.00 5.03
1717 2124 4.297510 CACTTCTCTTCTATGCATCCGAG 58.702 47.826 0.19 5.33 0.00 4.63
1723 2130 5.426689 AATGTCCACTTCTCTTCTATGCA 57.573 39.130 0.00 0.00 0.00 3.96
1724 2131 5.448360 GCAAATGTCCACTTCTCTTCTATGC 60.448 44.000 0.00 0.00 0.00 3.14
1728 2135 3.070018 CGCAAATGTCCACTTCTCTTCT 58.930 45.455 0.00 0.00 0.00 2.85
1748 2155 1.135689 CCAACAAGATTTTCTCCGGCG 60.136 52.381 0.00 0.00 0.00 6.46
1751 2158 3.641437 TTGCCAACAAGATTTTCTCCG 57.359 42.857 0.00 0.00 0.00 4.63
1816 2223 5.603596 ACTGAACAAAACACATACCGTAGA 58.396 37.500 0.00 0.00 0.00 2.59
1821 2228 6.326375 TGTCAAACTGAACAAAACACATACC 58.674 36.000 0.00 0.00 0.00 2.73
1976 2475 3.117794 CTGGCATGCAAAATTACATCGG 58.882 45.455 21.36 0.00 0.00 4.18
1977 2476 3.117794 CCTGGCATGCAAAATTACATCG 58.882 45.455 21.36 0.00 0.00 3.84
2020 2519 9.793259 TCCATAAGATCATTTACTATTTCCACC 57.207 33.333 0.00 0.00 0.00 4.61
2070 2569 5.941058 TCGACCAAATAGCCAATTCAGTTAA 59.059 36.000 0.00 0.00 0.00 2.01
2143 2643 9.565213 GAACTTCTATCAAAGTGAATTTCCATG 57.435 33.333 0.00 0.00 39.40 3.66
2161 2661 9.074576 TGTCAGACTAACAGTTATGAACTTCTA 57.925 33.333 1.31 0.00 40.46 2.10
2232 2749 3.762407 TGGAATGAACCTCGTCTTCAA 57.238 42.857 0.00 0.00 31.48 2.69
2272 2789 1.271054 GCAGTCCTCCTTCTCTTGCAA 60.271 52.381 0.00 0.00 0.00 4.08
2280 2797 1.604915 GAAGGGGCAGTCCTCCTTC 59.395 63.158 0.00 0.00 44.73 3.46
2310 2827 5.885230 TTCAAGCATCGACATGAAAGAAT 57.115 34.783 0.00 0.00 30.57 2.40
2319 2836 1.980951 GCCGCATTCAAGCATCGACA 61.981 55.000 0.00 0.00 0.00 4.35
2336 2853 3.982372 TTCATCACCGCTCGTCGCC 62.982 63.158 0.00 0.00 36.73 5.54
2350 2867 6.539173 TCGGTAAACATATATTGGCCTTCAT 58.461 36.000 3.32 0.00 0.00 2.57
2362 2879 1.202722 CCGGGGCTTCGGTAAACATAT 60.203 52.381 10.72 0.00 44.60 1.78
2382 2899 0.100861 CTAGTCTTCCGTCGCTTCCC 59.899 60.000 0.00 0.00 0.00 3.97
2423 2940 6.460781 CCACACCAGTTACTTATCACAACTA 58.539 40.000 0.00 0.00 31.46 2.24
2434 2951 1.348064 TAGCAGCCACACCAGTTACT 58.652 50.000 0.00 0.00 0.00 2.24
2437 2954 3.652057 ATATTAGCAGCCACACCAGTT 57.348 42.857 0.00 0.00 0.00 3.16
2445 2962 6.237996 CGTCGAGTTAAAAATATTAGCAGCCA 60.238 38.462 0.00 0.00 0.00 4.75
2468 2985 0.683504 ACCGACCAAGAGCTATCCGT 60.684 55.000 0.00 0.00 0.00 4.69
2498 3015 3.995199 TGAATTGTCTTCTCTTCACGCT 58.005 40.909 0.00 0.00 0.00 5.07
2512 3029 9.466497 AGATGATACAAACTACCAATGAATTGT 57.534 29.630 2.55 0.00 36.06 2.71
2571 3088 0.898320 ATCACCACCTCAACTCTCGG 59.102 55.000 0.00 0.00 0.00 4.63
2579 3096 0.035152 GGCATCACATCACCACCTCA 60.035 55.000 0.00 0.00 0.00 3.86
2604 3124 6.765036 CAGTAGATGCTGAAGAAATACACCAT 59.235 38.462 0.00 0.00 38.70 3.55
2630 3150 6.755141 CCAAATTCTATTGATTCACTTGCAGG 59.245 38.462 0.00 0.00 31.84 4.85
2687 3207 3.576078 ATGTCTCCAGACCAAACAACA 57.424 42.857 4.25 0.00 44.15 3.33
2688 3208 4.918810 AAATGTCTCCAGACCAAACAAC 57.081 40.909 4.25 0.00 44.15 3.32
2737 3272 1.064505 CACAACCAACAGTGTGCAGAG 59.935 52.381 0.00 0.00 0.00 3.35
2744 3279 1.202114 AGCACAACACAACCAACAGTG 59.798 47.619 0.00 0.00 41.40 3.66
2772 3307 5.482908 ACCTCACAGAATCACAACATACTC 58.517 41.667 0.00 0.00 0.00 2.59
2868 3403 0.944386 GAGCTTGGTCTTTGCAACGA 59.056 50.000 0.00 0.00 0.00 3.85
2947 3484 9.590451 AGAATATGCATTGTATTTGTGGAAAAG 57.410 29.630 3.54 0.00 0.00 2.27
3030 3568 6.872920 TGTATTTGGGCCAGATATTTGTTTC 58.127 36.000 18.66 5.97 0.00 2.78
3077 3616 9.743057 TGTACACCTAAAAGACAAAAATTCATG 57.257 29.630 0.00 0.00 0.00 3.07
3081 3620 9.744468 GTGATGTACACCTAAAAGACAAAAATT 57.256 29.630 0.00 0.00 43.05 1.82
3119 3658 8.986477 AATTTGCACTATTGAAAGTATGAACC 57.014 30.769 0.00 0.00 0.00 3.62
3120 3659 9.846248 AGAATTTGCACTATTGAAAGTATGAAC 57.154 29.630 0.00 0.00 0.00 3.18
3122 3661 9.453572 AGAGAATTTGCACTATTGAAAGTATGA 57.546 29.630 0.00 0.00 0.00 2.15
3123 3662 9.713740 GAGAGAATTTGCACTATTGAAAGTATG 57.286 33.333 0.00 0.00 0.00 2.39
3124 3663 9.453572 TGAGAGAATTTGCACTATTGAAAGTAT 57.546 29.630 0.00 0.00 0.00 2.12
3125 3664 8.846943 TGAGAGAATTTGCACTATTGAAAGTA 57.153 30.769 0.00 0.00 0.00 2.24
3126 3665 7.750229 TGAGAGAATTTGCACTATTGAAAGT 57.250 32.000 0.00 0.00 0.00 2.66
3127 3666 8.077991 TGTTGAGAGAATTTGCACTATTGAAAG 58.922 33.333 0.00 0.00 0.00 2.62
3128 3667 7.939782 TGTTGAGAGAATTTGCACTATTGAAA 58.060 30.769 0.00 0.00 0.00 2.69
3129 3668 7.509141 TGTTGAGAGAATTTGCACTATTGAA 57.491 32.000 0.00 0.00 0.00 2.69
3130 3669 7.509141 TTGTTGAGAGAATTTGCACTATTGA 57.491 32.000 0.00 0.00 0.00 2.57
3131 3670 9.844790 TTATTGTTGAGAGAATTTGCACTATTG 57.155 29.630 0.00 0.00 0.00 1.90
3135 3674 9.846248 GTTATTATTGTTGAGAGAATTTGCACT 57.154 29.630 0.00 0.00 0.00 4.40
3136 3675 9.624697 TGTTATTATTGTTGAGAGAATTTGCAC 57.375 29.630 0.00 0.00 0.00 4.57
3160 3699 9.479549 GGGGATAATTATGTGATCCAATTATGT 57.520 33.333 1.78 0.00 40.90 2.29
3161 3700 8.917088 GGGGGATAATTATGTGATCCAATTATG 58.083 37.037 1.78 0.00 40.90 1.90
3162 3701 8.631906 TGGGGGATAATTATGTGATCCAATTAT 58.368 33.333 1.78 9.60 40.90 1.28
3163 3702 8.005831 TGGGGGATAATTATGTGATCCAATTA 57.994 34.615 1.78 0.00 40.90 1.40
3164 3703 6.873250 TGGGGGATAATTATGTGATCCAATT 58.127 36.000 1.78 0.00 40.90 2.32
3165 3704 6.482389 TGGGGGATAATTATGTGATCCAAT 57.518 37.500 1.78 0.00 40.90 3.16
3166 3705 5.939318 TGGGGGATAATTATGTGATCCAA 57.061 39.130 1.78 0.00 40.90 3.53
3167 3706 5.135191 TGTTGGGGGATAATTATGTGATCCA 59.865 40.000 1.78 1.29 40.90 3.41
3168 3707 5.640147 TGTTGGGGGATAATTATGTGATCC 58.360 41.667 1.78 0.00 38.78 3.36
3169 3708 6.350445 GCATGTTGGGGGATAATTATGTGATC 60.350 42.308 1.78 0.00 0.00 2.92
3170 3709 5.481473 GCATGTTGGGGGATAATTATGTGAT 59.519 40.000 1.78 0.00 0.00 3.06
3171 3710 4.832266 GCATGTTGGGGGATAATTATGTGA 59.168 41.667 1.78 0.00 0.00 3.58
3172 3711 4.588106 TGCATGTTGGGGGATAATTATGTG 59.412 41.667 1.78 0.00 0.00 3.21
3173 3712 4.813809 TGCATGTTGGGGGATAATTATGT 58.186 39.130 1.78 0.00 0.00 2.29
3174 3713 5.070180 TGTTGCATGTTGGGGGATAATTATG 59.930 40.000 1.78 0.00 0.00 1.90
3175 3714 5.215069 TGTTGCATGTTGGGGGATAATTAT 58.785 37.500 0.00 0.00 0.00 1.28
3176 3715 4.614475 TGTTGCATGTTGGGGGATAATTA 58.386 39.130 0.00 0.00 0.00 1.40
3177 3716 3.448934 TGTTGCATGTTGGGGGATAATT 58.551 40.909 0.00 0.00 0.00 1.40
3178 3717 3.113191 TGTTGCATGTTGGGGGATAAT 57.887 42.857 0.00 0.00 0.00 1.28
3179 3718 2.612285 TGTTGCATGTTGGGGGATAA 57.388 45.000 0.00 0.00 0.00 1.75
3180 3719 2.612285 TTGTTGCATGTTGGGGGATA 57.388 45.000 0.00 0.00 0.00 2.59
3181 3720 1.624813 CTTTGTTGCATGTTGGGGGAT 59.375 47.619 0.00 0.00 0.00 3.85
3182 3721 1.047002 CTTTGTTGCATGTTGGGGGA 58.953 50.000 0.00 0.00 0.00 4.81
3183 3722 1.001181 CTCTTTGTTGCATGTTGGGGG 59.999 52.381 0.00 0.00 0.00 5.40
3184 3723 1.688197 ACTCTTTGTTGCATGTTGGGG 59.312 47.619 0.00 0.00 0.00 4.96
3185 3724 2.361757 TGACTCTTTGTTGCATGTTGGG 59.638 45.455 0.00 0.00 0.00 4.12
3186 3725 3.067180 AGTGACTCTTTGTTGCATGTTGG 59.933 43.478 0.00 0.00 0.00 3.77
3187 3726 4.285292 GAGTGACTCTTTGTTGCATGTTG 58.715 43.478 5.12 0.00 0.00 3.33
3188 3727 3.316308 GGAGTGACTCTTTGTTGCATGTT 59.684 43.478 12.92 0.00 0.00 2.71
3189 3728 2.880890 GGAGTGACTCTTTGTTGCATGT 59.119 45.455 12.92 0.00 0.00 3.21
3190 3729 2.880268 TGGAGTGACTCTTTGTTGCATG 59.120 45.455 12.92 0.00 0.00 4.06
3191 3730 3.213206 TGGAGTGACTCTTTGTTGCAT 57.787 42.857 12.92 0.00 0.00 3.96
3192 3731 2.708216 TGGAGTGACTCTTTGTTGCA 57.292 45.000 12.92 0.00 0.00 4.08
3193 3732 3.378427 ACTTTGGAGTGACTCTTTGTTGC 59.622 43.478 12.92 0.00 33.99 4.17
3194 3733 4.635765 TGACTTTGGAGTGACTCTTTGTTG 59.364 41.667 12.92 1.60 35.88 3.33
3195 3734 4.636206 GTGACTTTGGAGTGACTCTTTGTT 59.364 41.667 12.92 0.00 37.09 2.83
3196 3735 4.080863 AGTGACTTTGGAGTGACTCTTTGT 60.081 41.667 12.92 6.66 45.55 2.83
3197 3736 4.446371 AGTGACTTTGGAGTGACTCTTTG 58.554 43.478 12.92 3.60 45.55 2.77
3198 3737 4.762289 AGTGACTTTGGAGTGACTCTTT 57.238 40.909 12.92 0.00 45.55 2.52
3199 3738 5.871396 TTAGTGACTTTGGAGTGACTCTT 57.129 39.130 12.92 0.00 45.55 2.85
3200 3739 6.350612 GCTATTAGTGACTTTGGAGTGACTCT 60.351 42.308 12.92 0.00 45.55 3.24
3201 3740 5.808030 GCTATTAGTGACTTTGGAGTGACTC 59.192 44.000 3.47 3.47 45.55 3.36
3203 3742 4.563184 CGCTATTAGTGACTTTGGAGTGAC 59.437 45.833 0.00 0.00 39.91 3.67
3204 3743 4.381612 CCGCTATTAGTGACTTTGGAGTGA 60.382 45.833 5.81 0.00 35.88 3.41
3205 3744 3.865745 CCGCTATTAGTGACTTTGGAGTG 59.134 47.826 5.81 0.00 35.88 3.51
3206 3745 3.767673 TCCGCTATTAGTGACTTTGGAGT 59.232 43.478 5.81 0.00 39.32 3.85
3207 3746 4.098044 TCTCCGCTATTAGTGACTTTGGAG 59.902 45.833 5.81 0.00 41.39 3.86
3208 3747 4.021229 TCTCCGCTATTAGTGACTTTGGA 58.979 43.478 5.81 0.00 0.00 3.53
3209 3748 4.386867 TCTCCGCTATTAGTGACTTTGG 57.613 45.455 5.81 0.00 0.00 3.28
3210 3749 5.168569 TGTTCTCCGCTATTAGTGACTTTG 58.831 41.667 5.81 0.00 0.00 2.77
3211 3750 5.401531 TGTTCTCCGCTATTAGTGACTTT 57.598 39.130 5.81 0.00 0.00 2.66
3212 3751 5.401531 TTGTTCTCCGCTATTAGTGACTT 57.598 39.130 5.81 0.00 0.00 3.01
3213 3752 5.401531 TTTGTTCTCCGCTATTAGTGACT 57.598 39.130 5.81 0.00 0.00 3.41
3214 3753 5.810587 TCATTTGTTCTCCGCTATTAGTGAC 59.189 40.000 5.81 0.00 0.00 3.67
3215 3754 5.972935 TCATTTGTTCTCCGCTATTAGTGA 58.027 37.500 5.81 0.00 0.00 3.41
3216 3755 6.535150 TCTTCATTTGTTCTCCGCTATTAGTG 59.465 38.462 0.00 0.00 0.00 2.74
3217 3756 6.640518 TCTTCATTTGTTCTCCGCTATTAGT 58.359 36.000 0.00 0.00 0.00 2.24
3218 3757 6.980978 TCTCTTCATTTGTTCTCCGCTATTAG 59.019 38.462 0.00 0.00 0.00 1.73
3219 3758 6.873997 TCTCTTCATTTGTTCTCCGCTATTA 58.126 36.000 0.00 0.00 0.00 0.98
3220 3759 5.734720 TCTCTTCATTTGTTCTCCGCTATT 58.265 37.500 0.00 0.00 0.00 1.73
3221 3760 5.344743 TCTCTTCATTTGTTCTCCGCTAT 57.655 39.130 0.00 0.00 0.00 2.97
3222 3761 4.801330 TCTCTTCATTTGTTCTCCGCTA 57.199 40.909 0.00 0.00 0.00 4.26
3223 3762 3.685139 TCTCTTCATTTGTTCTCCGCT 57.315 42.857 0.00 0.00 0.00 5.52
3224 3763 4.954092 AATCTCTTCATTTGTTCTCCGC 57.046 40.909 0.00 0.00 0.00 5.54
3225 3764 6.540189 ACCATAATCTCTTCATTTGTTCTCCG 59.460 38.462 0.00 0.00 0.00 4.63
3226 3765 7.872113 ACCATAATCTCTTCATTTGTTCTCC 57.128 36.000 0.00 0.00 0.00 3.71
3227 3766 9.050601 CCTACCATAATCTCTTCATTTGTTCTC 57.949 37.037 0.00 0.00 0.00 2.87
3228 3767 8.772250 TCCTACCATAATCTCTTCATTTGTTCT 58.228 33.333 0.00 0.00 0.00 3.01
3229 3768 8.964476 TCCTACCATAATCTCTTCATTTGTTC 57.036 34.615 0.00 0.00 0.00 3.18
3232 3771 9.144747 CGTATCCTACCATAATCTCTTCATTTG 57.855 37.037 0.00 0.00 0.00 2.32
3233 3772 9.090103 TCGTATCCTACCATAATCTCTTCATTT 57.910 33.333 0.00 0.00 0.00 2.32
3234 3773 8.651589 TCGTATCCTACCATAATCTCTTCATT 57.348 34.615 0.00 0.00 0.00 2.57
3235 3774 8.651589 TTCGTATCCTACCATAATCTCTTCAT 57.348 34.615 0.00 0.00 0.00 2.57
3236 3775 8.358148 GTTTCGTATCCTACCATAATCTCTTCA 58.642 37.037 0.00 0.00 0.00 3.02
3237 3776 7.813627 GGTTTCGTATCCTACCATAATCTCTTC 59.186 40.741 0.00 0.00 0.00 2.87
3238 3777 7.289317 TGGTTTCGTATCCTACCATAATCTCTT 59.711 37.037 0.00 0.00 35.82 2.85
3239 3778 6.781014 TGGTTTCGTATCCTACCATAATCTCT 59.219 38.462 0.00 0.00 35.82 3.10
3240 3779 6.867293 GTGGTTTCGTATCCTACCATAATCTC 59.133 42.308 0.00 0.00 42.21 2.75
3241 3780 6.239515 GGTGGTTTCGTATCCTACCATAATCT 60.240 42.308 0.00 0.00 42.21 2.40
3242 3781 5.930569 GGTGGTTTCGTATCCTACCATAATC 59.069 44.000 0.00 0.00 42.21 1.75
3243 3782 5.605488 AGGTGGTTTCGTATCCTACCATAAT 59.395 40.000 0.00 0.00 42.21 1.28
3244 3783 4.964262 AGGTGGTTTCGTATCCTACCATAA 59.036 41.667 0.00 0.00 42.21 1.90
3245 3784 4.549668 AGGTGGTTTCGTATCCTACCATA 58.450 43.478 0.00 0.00 42.21 2.74
3246 3785 3.381335 AGGTGGTTTCGTATCCTACCAT 58.619 45.455 0.00 0.00 42.21 3.55
3247 3786 2.762327 GAGGTGGTTTCGTATCCTACCA 59.238 50.000 10.86 0.00 38.29 3.25
3248 3787 2.762327 TGAGGTGGTTTCGTATCCTACC 59.238 50.000 0.00 0.00 0.00 3.18
3249 3788 4.460948 TTGAGGTGGTTTCGTATCCTAC 57.539 45.455 0.00 0.00 0.00 3.18
3250 3789 4.529377 ACTTTGAGGTGGTTTCGTATCCTA 59.471 41.667 0.00 0.00 0.00 2.94
3251 3790 3.326880 ACTTTGAGGTGGTTTCGTATCCT 59.673 43.478 0.00 0.00 0.00 3.24
3252 3791 3.671716 ACTTTGAGGTGGTTTCGTATCC 58.328 45.455 0.00 0.00 0.00 2.59
3253 3792 6.980051 ATAACTTTGAGGTGGTTTCGTATC 57.020 37.500 0.00 0.00 0.00 2.24
3254 3793 7.166167 AGAATAACTTTGAGGTGGTTTCGTAT 58.834 34.615 0.00 0.00 0.00 3.06
3255 3794 6.527423 AGAATAACTTTGAGGTGGTTTCGTA 58.473 36.000 0.00 0.00 0.00 3.43
3256 3795 5.374071 AGAATAACTTTGAGGTGGTTTCGT 58.626 37.500 0.00 0.00 0.00 3.85
3257 3796 5.941948 AGAATAACTTTGAGGTGGTTTCG 57.058 39.130 0.00 0.00 0.00 3.46
3275 3814 9.695526 CTCTTGAATAGATCGATCAGAAAGAAT 57.304 33.333 26.47 6.48 30.92 2.40
3276 3815 8.690884 ACTCTTGAATAGATCGATCAGAAAGAA 58.309 33.333 26.47 10.91 30.92 2.52
3277 3816 8.231692 ACTCTTGAATAGATCGATCAGAAAGA 57.768 34.615 26.47 21.92 30.92 2.52
3278 3817 7.594758 GGACTCTTGAATAGATCGATCAGAAAG 59.405 40.741 26.47 19.51 30.92 2.62
3279 3818 7.429633 GGACTCTTGAATAGATCGATCAGAAA 58.570 38.462 26.47 12.17 30.92 2.52
3280 3819 6.293680 CGGACTCTTGAATAGATCGATCAGAA 60.294 42.308 26.47 12.27 30.92 3.02
3281 3820 5.180304 CGGACTCTTGAATAGATCGATCAGA 59.820 44.000 26.47 17.22 30.92 3.27
3282 3821 5.049060 ACGGACTCTTGAATAGATCGATCAG 60.049 44.000 26.47 14.02 30.92 2.90
3283 3822 4.822350 ACGGACTCTTGAATAGATCGATCA 59.178 41.667 26.47 13.23 30.92 2.92
3284 3823 5.365403 ACGGACTCTTGAATAGATCGATC 57.635 43.478 17.91 17.91 30.92 3.69
3285 3824 5.998981 ACTACGGACTCTTGAATAGATCGAT 59.001 40.000 0.00 0.00 30.92 3.59
3286 3825 5.366460 ACTACGGACTCTTGAATAGATCGA 58.634 41.667 0.00 0.00 30.92 3.59
3287 3826 5.676532 ACTACGGACTCTTGAATAGATCG 57.323 43.478 0.00 0.00 30.92 3.69
3288 3827 9.968870 ATTTTACTACGGACTCTTGAATAGATC 57.031 33.333 0.00 0.00 30.92 2.75
3293 3832 9.886132 ATGTTATTTTACTACGGACTCTTGAAT 57.114 29.630 0.00 0.00 0.00 2.57
3294 3833 9.146984 CATGTTATTTTACTACGGACTCTTGAA 57.853 33.333 0.00 0.00 0.00 2.69
3295 3834 8.525316 TCATGTTATTTTACTACGGACTCTTGA 58.475 33.333 0.00 0.00 0.00 3.02
3296 3835 8.697846 TCATGTTATTTTACTACGGACTCTTG 57.302 34.615 0.00 0.00 0.00 3.02
3297 3836 9.367444 CTTCATGTTATTTTACTACGGACTCTT 57.633 33.333 0.00 0.00 0.00 2.85
3298 3837 7.491696 GCTTCATGTTATTTTACTACGGACTCT 59.508 37.037 0.00 0.00 0.00 3.24
3299 3838 7.491696 AGCTTCATGTTATTTTACTACGGACTC 59.508 37.037 0.00 0.00 0.00 3.36
3300 3839 7.328737 AGCTTCATGTTATTTTACTACGGACT 58.671 34.615 0.00 0.00 0.00 3.85
3301 3840 7.535489 AGCTTCATGTTATTTTACTACGGAC 57.465 36.000 0.00 0.00 0.00 4.79
3302 3841 9.826574 AATAGCTTCATGTTATTTTACTACGGA 57.173 29.630 0.00 0.00 29.56 4.69
3310 3849 8.739972 ACGGAAAGAATAGCTTCATGTTATTTT 58.260 29.630 0.00 0.00 35.24 1.82
3311 3850 8.281212 ACGGAAAGAATAGCTTCATGTTATTT 57.719 30.769 0.00 0.00 35.24 1.40
3312 3851 7.865706 ACGGAAAGAATAGCTTCATGTTATT 57.134 32.000 0.00 0.00 35.24 1.40
3313 3852 7.552687 TGAACGGAAAGAATAGCTTCATGTTAT 59.447 33.333 0.00 0.00 35.24 1.89
3314 3853 6.876789 TGAACGGAAAGAATAGCTTCATGTTA 59.123 34.615 0.00 0.00 35.24 2.41
3315 3854 5.705441 TGAACGGAAAGAATAGCTTCATGTT 59.295 36.000 0.00 0.00 35.24 2.71
3316 3855 5.245531 TGAACGGAAAGAATAGCTTCATGT 58.754 37.500 0.00 0.00 35.24 3.21
3317 3856 5.801350 TGAACGGAAAGAATAGCTTCATG 57.199 39.130 0.00 0.00 35.24 3.07
3318 3857 6.825721 AGATTGAACGGAAAGAATAGCTTCAT 59.174 34.615 0.00 0.00 35.24 2.57
3319 3858 6.173339 AGATTGAACGGAAAGAATAGCTTCA 58.827 36.000 0.00 0.00 35.24 3.02
3320 3859 6.670077 AGATTGAACGGAAAGAATAGCTTC 57.330 37.500 0.00 0.00 35.24 3.86
3321 3860 7.442666 GGATAGATTGAACGGAAAGAATAGCTT 59.557 37.037 0.00 0.00 38.88 3.74
3322 3861 6.931840 GGATAGATTGAACGGAAAGAATAGCT 59.068 38.462 0.00 0.00 0.00 3.32
3323 3862 6.931840 AGGATAGATTGAACGGAAAGAATAGC 59.068 38.462 0.00 0.00 0.00 2.97
3324 3863 9.632807 CTAGGATAGATTGAACGGAAAGAATAG 57.367 37.037 0.00 0.00 42.77 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.