Multiple sequence alignment - TraesCS5A01G525600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G525600 chr5A 100.000 2216 0 0 1 2216 685874882 685877097 0.000000e+00 4093
1 TraesCS5A01G525600 chr5A 97.419 155 4 0 221 375 678573977 678573823 4.690000e-67 265
2 TraesCS5A01G525600 chr4B 93.949 1223 64 6 994 2213 646873214 646874429 0.000000e+00 1840
3 TraesCS5A01G525600 chr4B 91.922 619 45 3 373 990 646872513 646873127 0.000000e+00 861
4 TraesCS5A01G525600 chr4B 98.701 154 2 0 222 375 73100638 73100485 7.800000e-70 274
5 TraesCS5A01G525600 chr4D 92.427 1228 71 11 994 2213 502553867 502555080 0.000000e+00 1733
6 TraesCS5A01G525600 chr4D 93.366 618 37 2 373 990 502553111 502553724 0.000000e+00 911
7 TraesCS5A01G525600 chr4D 92.202 218 14 2 1 217 502552900 502553115 2.760000e-79 305
8 TraesCS5A01G525600 chr3B 96.914 162 4 1 214 374 612035629 612035790 1.010000e-68 270
9 TraesCS5A01G525600 chr2D 98.675 151 2 0 222 372 398728223 398728073 3.630000e-68 268
10 TraesCS5A01G525600 chr1A 98.675 151 2 0 222 372 124785952 124785802 3.630000e-68 268
11 TraesCS5A01G525600 chr4A 98.630 146 2 0 222 367 639055007 639055152 2.180000e-65 259
12 TraesCS5A01G525600 chr4A 96.753 154 4 1 220 372 2399663 2399816 2.820000e-64 255
13 TraesCS5A01G525600 chr5B 93.793 145 5 2 222 366 358616930 358617070 4.790000e-52 215
14 TraesCS5A01G525600 chr6B 93.571 140 9 0 222 361 594438525 594438386 2.230000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G525600 chr5A 685874882 685877097 2215 False 4093.0 4093 100.0000 1 2216 1 chr5A.!!$F1 2215
1 TraesCS5A01G525600 chr4B 646872513 646874429 1916 False 1350.5 1840 92.9355 373 2213 2 chr4B.!!$F1 1840
2 TraesCS5A01G525600 chr4D 502552900 502555080 2180 False 983.0 1733 92.6650 1 2213 3 chr4D.!!$F1 2212

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
280 282 0.027194 CACGATGCTTTGATCCAGCG 59.973 55.0 5.92 5.92 45.3 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1364 1509 0.031178 GCACAGCCACAAGTTTCCAG 59.969 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.959749 CTTTTACTAGATCTAATGAGTCTGTCC 57.040 37.037 3.57 0.00 0.00 4.02
56 57 7.776107 TCTAATGAGTCTGTCCTAAATGTCAG 58.224 38.462 0.00 0.00 0.00 3.51
110 111 1.629861 TCCCAATCAGACTCACATGCA 59.370 47.619 0.00 0.00 0.00 3.96
121 122 0.324614 TCACATGCACCCATTCGAGT 59.675 50.000 0.00 0.00 0.00 4.18
122 123 1.552792 TCACATGCACCCATTCGAGTA 59.447 47.619 0.00 0.00 0.00 2.59
129 130 3.823873 TGCACCCATTCGAGTATTTTGTT 59.176 39.130 0.00 0.00 0.00 2.83
130 131 5.004448 TGCACCCATTCGAGTATTTTGTTA 58.996 37.500 0.00 0.00 0.00 2.41
165 167 1.319614 ACCGCATGCAAACCCCATAC 61.320 55.000 19.57 0.00 0.00 2.39
212 214 0.327591 AGTAGTCCGAGAAGACCGGT 59.672 55.000 6.92 6.92 46.53 5.28
213 215 1.172175 GTAGTCCGAGAAGACCGGTT 58.828 55.000 9.42 0.00 46.53 4.44
214 216 1.543358 GTAGTCCGAGAAGACCGGTTT 59.457 52.381 9.42 0.00 46.53 3.27
215 217 0.317479 AGTCCGAGAAGACCGGTTTG 59.683 55.000 9.42 0.00 46.53 2.93
216 218 0.316204 GTCCGAGAAGACCGGTTTGA 59.684 55.000 9.42 0.00 46.53 2.69
217 219 0.316204 TCCGAGAAGACCGGTTTGAC 59.684 55.000 9.42 1.01 46.53 3.18
218 220 0.032952 CCGAGAAGACCGGTTTGACA 59.967 55.000 9.42 0.00 41.91 3.58
219 221 1.539496 CCGAGAAGACCGGTTTGACAA 60.539 52.381 9.42 0.00 41.91 3.18
220 222 1.792949 CGAGAAGACCGGTTTGACAAG 59.207 52.381 9.42 0.00 0.00 3.16
221 223 1.531578 GAGAAGACCGGTTTGACAAGC 59.468 52.381 9.42 0.00 0.00 4.01
229 231 2.963498 GGTTTGACAAGCGGAACTAC 57.037 50.000 0.00 0.00 0.00 2.73
230 232 2.490991 GGTTTGACAAGCGGAACTACT 58.509 47.619 0.00 0.00 0.00 2.57
231 233 2.223377 GGTTTGACAAGCGGAACTACTG 59.777 50.000 0.00 0.00 0.00 2.74
232 234 3.128349 GTTTGACAAGCGGAACTACTGA 58.872 45.455 0.00 0.00 0.00 3.41
233 235 2.724977 TGACAAGCGGAACTACTGAG 57.275 50.000 0.00 0.00 0.00 3.35
234 236 1.336887 TGACAAGCGGAACTACTGAGC 60.337 52.381 0.00 0.00 0.00 4.26
235 237 0.679505 ACAAGCGGAACTACTGAGCA 59.320 50.000 0.00 0.00 0.00 4.26
236 238 1.337260 ACAAGCGGAACTACTGAGCAG 60.337 52.381 0.00 0.00 0.00 4.24
237 239 0.390472 AAGCGGAACTACTGAGCAGC 60.390 55.000 0.00 0.00 0.00 5.25
238 240 1.811679 GCGGAACTACTGAGCAGCC 60.812 63.158 0.00 0.00 0.00 4.85
239 241 1.517257 CGGAACTACTGAGCAGCCG 60.517 63.158 0.00 0.00 0.00 5.52
240 242 1.890894 GGAACTACTGAGCAGCCGA 59.109 57.895 0.00 0.00 0.00 5.54
241 243 0.458716 GGAACTACTGAGCAGCCGAC 60.459 60.000 0.00 0.00 0.00 4.79
242 244 0.243907 GAACTACTGAGCAGCCGACA 59.756 55.000 0.00 0.00 0.00 4.35
243 245 0.038159 AACTACTGAGCAGCCGACAC 60.038 55.000 0.00 0.00 0.00 3.67
244 246 1.153745 CTACTGAGCAGCCGACACC 60.154 63.158 0.00 0.00 0.00 4.16
245 247 2.564553 CTACTGAGCAGCCGACACCC 62.565 65.000 0.00 0.00 0.00 4.61
246 248 4.007644 CTGAGCAGCCGACACCCA 62.008 66.667 0.00 0.00 0.00 4.51
247 249 4.314440 TGAGCAGCCGACACCCAC 62.314 66.667 0.00 0.00 0.00 4.61
248 250 4.008933 GAGCAGCCGACACCCACT 62.009 66.667 0.00 0.00 0.00 4.00
249 251 4.320456 AGCAGCCGACACCCACTG 62.320 66.667 0.00 0.00 0.00 3.66
255 257 4.308458 CGACACCCACTGGCCGAA 62.308 66.667 0.00 0.00 33.59 4.30
256 258 2.668550 GACACCCACTGGCCGAAC 60.669 66.667 0.00 0.00 33.59 3.95
257 259 3.469863 GACACCCACTGGCCGAACA 62.470 63.158 0.00 0.00 33.59 3.18
258 260 2.034066 CACCCACTGGCCGAACAT 59.966 61.111 0.00 0.00 33.59 2.71
259 261 1.603455 CACCCACTGGCCGAACATT 60.603 57.895 0.00 0.00 33.59 2.71
260 262 1.603455 ACCCACTGGCCGAACATTG 60.603 57.895 0.00 0.00 33.59 2.82
261 263 2.568090 CCACTGGCCGAACATTGC 59.432 61.111 0.00 0.00 0.00 3.56
262 264 2.267351 CCACTGGCCGAACATTGCA 61.267 57.895 0.00 0.00 0.00 4.08
263 265 1.081242 CACTGGCCGAACATTGCAC 60.081 57.895 0.00 0.00 0.00 4.57
264 266 2.176546 CTGGCCGAACATTGCACG 59.823 61.111 0.00 0.00 0.00 5.34
265 267 2.281139 TGGCCGAACATTGCACGA 60.281 55.556 0.00 0.00 0.00 4.35
266 268 1.647545 CTGGCCGAACATTGCACGAT 61.648 55.000 0.00 0.00 0.00 3.73
267 269 1.226379 GGCCGAACATTGCACGATG 60.226 57.895 0.00 0.00 0.00 3.84
268 270 1.869132 GCCGAACATTGCACGATGC 60.869 57.895 0.00 0.00 45.29 3.91
269 271 1.796151 CCGAACATTGCACGATGCT 59.204 52.632 10.54 0.00 45.31 3.79
270 272 0.168788 CCGAACATTGCACGATGCTT 59.831 50.000 10.54 0.00 45.31 3.91
271 273 1.401409 CCGAACATTGCACGATGCTTT 60.401 47.619 10.54 0.00 45.31 3.51
272 274 1.645265 CGAACATTGCACGATGCTTTG 59.355 47.619 10.54 9.87 45.31 2.77
273 275 2.665245 CGAACATTGCACGATGCTTTGA 60.665 45.455 10.54 0.00 45.31 2.69
274 276 3.504863 GAACATTGCACGATGCTTTGAT 58.495 40.909 10.54 4.29 45.31 2.57
275 277 3.141002 ACATTGCACGATGCTTTGATC 57.859 42.857 10.54 0.00 45.31 2.92
276 278 2.159338 ACATTGCACGATGCTTTGATCC 60.159 45.455 10.54 0.00 45.31 3.36
277 279 1.532523 TTGCACGATGCTTTGATCCA 58.467 45.000 10.54 0.00 45.31 3.41
278 280 1.089112 TGCACGATGCTTTGATCCAG 58.911 50.000 10.54 0.00 45.31 3.86
279 281 0.248377 GCACGATGCTTTGATCCAGC 60.248 55.000 6.99 6.99 40.96 4.85
280 282 0.027194 CACGATGCTTTGATCCAGCG 59.973 55.000 5.92 5.92 45.30 5.18
281 283 1.091771 ACGATGCTTTGATCCAGCGG 61.092 55.000 11.12 5.52 44.23 5.52
282 284 1.091771 CGATGCTTTGATCCAGCGGT 61.092 55.000 8.95 1.67 40.45 5.68
283 285 0.659957 GATGCTTTGATCCAGCGGTC 59.340 55.000 8.95 6.51 40.45 4.79
284 286 1.091771 ATGCTTTGATCCAGCGGTCG 61.092 55.000 8.95 0.00 40.45 4.79
285 287 2.464459 GCTTTGATCCAGCGGTCGG 61.464 63.158 0.00 0.00 0.00 4.79
286 288 2.435938 TTTGATCCAGCGGTCGGC 60.436 61.111 0.00 0.00 44.05 5.54
287 289 3.969250 TTTGATCCAGCGGTCGGCC 62.969 63.158 0.00 0.00 45.17 6.13
289 291 4.593864 GATCCAGCGGTCGGCCTC 62.594 72.222 3.66 0.00 45.17 4.70
295 297 4.083862 GCGGTCGGCCTCCTCTTT 62.084 66.667 3.66 0.00 34.80 2.52
296 298 2.125512 CGGTCGGCCTCCTCTTTG 60.126 66.667 3.66 0.00 0.00 2.77
297 299 2.943978 CGGTCGGCCTCCTCTTTGT 61.944 63.158 3.66 0.00 0.00 2.83
298 300 1.376037 GGTCGGCCTCCTCTTTGTG 60.376 63.158 0.00 0.00 0.00 3.33
299 301 1.671742 GTCGGCCTCCTCTTTGTGA 59.328 57.895 0.00 0.00 0.00 3.58
300 302 0.670854 GTCGGCCTCCTCTTTGTGAC 60.671 60.000 0.00 0.00 0.00 3.67
301 303 1.118965 TCGGCCTCCTCTTTGTGACA 61.119 55.000 0.00 0.00 0.00 3.58
302 304 0.036010 CGGCCTCCTCTTTGTGACAT 60.036 55.000 0.00 0.00 0.00 3.06
303 305 1.457346 GGCCTCCTCTTTGTGACATG 58.543 55.000 0.00 0.00 0.00 3.21
304 306 0.807496 GCCTCCTCTTTGTGACATGC 59.193 55.000 0.00 0.00 0.00 4.06
305 307 1.883638 GCCTCCTCTTTGTGACATGCA 60.884 52.381 0.00 0.00 0.00 3.96
306 308 2.719739 CCTCCTCTTTGTGACATGCAT 58.280 47.619 0.00 0.00 0.00 3.96
307 309 2.422479 CCTCCTCTTTGTGACATGCATG 59.578 50.000 25.09 25.09 0.00 4.06
308 310 3.079578 CTCCTCTTTGTGACATGCATGT 58.920 45.455 31.82 31.82 45.16 3.21
309 311 4.256110 CTCCTCTTTGTGACATGCATGTA 58.744 43.478 31.45 14.49 41.95 2.29
310 312 4.002982 TCCTCTTTGTGACATGCATGTAC 58.997 43.478 31.45 25.74 41.95 2.90
311 313 3.181517 CCTCTTTGTGACATGCATGTACG 60.182 47.826 31.45 14.10 41.95 3.67
312 314 3.658709 TCTTTGTGACATGCATGTACGA 58.341 40.909 31.45 23.23 41.95 3.43
313 315 4.252878 TCTTTGTGACATGCATGTACGAT 58.747 39.130 31.45 9.56 41.95 3.73
314 316 4.329801 TCTTTGTGACATGCATGTACGATC 59.670 41.667 31.45 18.92 41.95 3.69
315 317 3.244033 TGTGACATGCATGTACGATCA 57.756 42.857 31.45 21.25 41.95 2.92
316 318 3.189285 TGTGACATGCATGTACGATCAG 58.811 45.455 31.45 2.62 41.95 2.90
317 319 3.119173 TGTGACATGCATGTACGATCAGA 60.119 43.478 31.45 19.67 41.95 3.27
318 320 4.053983 GTGACATGCATGTACGATCAGAT 58.946 43.478 31.45 5.52 41.95 2.90
319 321 4.149571 GTGACATGCATGTACGATCAGATC 59.850 45.833 31.45 15.41 41.95 2.75
320 322 4.202141 TGACATGCATGTACGATCAGATCA 60.202 41.667 31.45 17.74 41.95 2.92
321 323 4.304939 ACATGCATGTACGATCAGATCAG 58.695 43.478 30.50 6.05 39.68 2.90
322 324 4.202192 ACATGCATGTACGATCAGATCAGT 60.202 41.667 30.50 11.14 39.68 3.41
323 325 5.010012 ACATGCATGTACGATCAGATCAGTA 59.990 40.000 30.50 10.25 39.68 2.74
324 326 5.113502 TGCATGTACGATCAGATCAGTAG 57.886 43.478 11.12 4.29 0.00 2.57
325 327 3.917380 GCATGTACGATCAGATCAGTAGC 59.083 47.826 11.12 9.27 0.00 3.58
326 328 4.557496 GCATGTACGATCAGATCAGTAGCA 60.557 45.833 11.12 12.58 0.00 3.49
327 329 5.707931 CATGTACGATCAGATCAGTAGCAT 58.292 41.667 11.12 13.80 0.00 3.79
328 330 5.363979 TGTACGATCAGATCAGTAGCATC 57.636 43.478 11.12 3.55 0.00 3.91
329 331 3.550950 ACGATCAGATCAGTAGCATCG 57.449 47.619 11.12 0.46 39.20 3.84
330 332 2.881513 ACGATCAGATCAGTAGCATCGT 59.118 45.455 11.12 6.71 41.03 3.73
331 333 3.058570 ACGATCAGATCAGTAGCATCGTC 60.059 47.826 11.12 0.00 41.83 4.20
332 334 3.669290 CGATCAGATCAGTAGCATCGTCC 60.669 52.174 11.12 0.00 0.00 4.79
333 335 2.654863 TCAGATCAGTAGCATCGTCCA 58.345 47.619 0.00 0.00 0.00 4.02
334 336 2.620585 TCAGATCAGTAGCATCGTCCAG 59.379 50.000 0.00 0.00 0.00 3.86
335 337 2.620585 CAGATCAGTAGCATCGTCCAGA 59.379 50.000 0.00 0.00 0.00 3.86
336 338 2.621055 AGATCAGTAGCATCGTCCAGAC 59.379 50.000 0.00 0.00 0.00 3.51
337 339 1.834188 TCAGTAGCATCGTCCAGACA 58.166 50.000 0.00 0.00 0.00 3.41
338 340 2.379005 TCAGTAGCATCGTCCAGACAT 58.621 47.619 0.00 0.00 0.00 3.06
339 341 2.359214 TCAGTAGCATCGTCCAGACATC 59.641 50.000 0.00 0.00 0.00 3.06
340 342 1.335182 AGTAGCATCGTCCAGACATCG 59.665 52.381 0.00 0.00 0.00 3.84
341 343 0.668535 TAGCATCGTCCAGACATCGG 59.331 55.000 0.00 0.00 0.00 4.18
342 344 2.240500 GCATCGTCCAGACATCGGC 61.241 63.158 0.00 0.00 0.00 5.54
343 345 1.439228 CATCGTCCAGACATCGGCT 59.561 57.895 0.00 0.00 0.00 5.52
344 346 0.873312 CATCGTCCAGACATCGGCTG 60.873 60.000 0.00 0.00 0.00 4.85
345 347 2.635229 ATCGTCCAGACATCGGCTGC 62.635 60.000 0.00 0.00 32.06 5.25
346 348 2.265739 GTCCAGACATCGGCTGCA 59.734 61.111 0.50 0.00 32.06 4.41
347 349 2.103042 GTCCAGACATCGGCTGCAC 61.103 63.158 0.50 0.00 32.06 4.57
348 350 2.046988 CCAGACATCGGCTGCACA 60.047 61.111 0.50 0.00 32.06 4.57
349 351 2.393768 CCAGACATCGGCTGCACAC 61.394 63.158 0.50 0.00 32.06 3.82
350 352 2.046892 AGACATCGGCTGCACACC 60.047 61.111 0.50 0.00 0.00 4.16
365 367 3.706287 CACCGTCGTGTGTATAGCA 57.294 52.632 5.89 0.00 35.10 3.49
366 368 1.545759 CACCGTCGTGTGTATAGCAG 58.454 55.000 5.89 0.00 35.10 4.24
367 369 0.179145 ACCGTCGTGTGTATAGCAGC 60.179 55.000 0.00 0.00 0.00 5.25
368 370 1.200474 CCGTCGTGTGTATAGCAGCG 61.200 60.000 0.00 0.00 0.00 5.18
369 371 1.798368 CGTCGTGTGTATAGCAGCGC 61.798 60.000 0.00 0.00 0.00 5.92
370 372 0.525668 GTCGTGTGTATAGCAGCGCT 60.526 55.000 2.64 2.64 43.41 5.92
371 373 0.248498 TCGTGTGTATAGCAGCGCTC 60.248 55.000 7.13 2.24 40.44 5.03
378 380 2.094234 TGTATAGCAGCGCTCTTTGACA 60.094 45.455 7.13 6.93 40.44 3.58
398 400 5.944599 TGACAAGAGTCTAACTTCGGAGTAT 59.055 40.000 0.00 0.00 45.20 2.12
400 402 5.711036 ACAAGAGTCTAACTTCGGAGTATGT 59.289 40.000 0.00 0.00 34.21 2.29
447 449 3.425577 CAACATGTTGCCGCTTATGAT 57.574 42.857 24.69 0.00 33.45 2.45
520 522 0.107703 TGGTTCTCCATCGTGCCATC 60.108 55.000 0.00 0.00 39.03 3.51
549 551 7.959175 ACATGCTTACCCTTATATAAACTCGA 58.041 34.615 0.00 0.00 0.00 4.04
579 581 3.829886 TTTGACGCATGATTGTCTTCC 57.170 42.857 0.00 0.00 36.10 3.46
582 584 3.521560 TGACGCATGATTGTCTTCCTAC 58.478 45.455 0.00 0.00 36.10 3.18
585 587 3.270027 CGCATGATTGTCTTCCTACCAA 58.730 45.455 0.00 0.00 0.00 3.67
627 629 3.644335 TGCAATCCATGAATTCATCCCA 58.356 40.909 18.16 5.55 33.61 4.37
733 736 7.255801 CCTTTCTTTTTGATACACTGCCCTTTA 60.256 37.037 0.00 0.00 0.00 1.85
741 744 2.514803 ACACTGCCCTTTATGTTGTCC 58.485 47.619 0.00 0.00 0.00 4.02
743 746 3.329520 ACACTGCCCTTTATGTTGTCCTA 59.670 43.478 0.00 0.00 0.00 2.94
747 750 6.772716 CACTGCCCTTTATGTTGTCCTATAAT 59.227 38.462 0.00 0.00 0.00 1.28
780 783 5.565592 TGCTAACTAAAACATGGCAGATG 57.434 39.130 0.00 0.00 0.00 2.90
842 845 4.582869 TGAGCCCATCATATATGACAAGC 58.417 43.478 17.60 18.06 40.03 4.01
850 853 9.181061 CCCATCATATATGACAAGCAATATTCA 57.819 33.333 17.60 0.00 40.03 2.57
875 878 8.131100 CACAAGACATGAATATCAATTGGTACC 58.869 37.037 4.43 4.43 0.00 3.34
916 919 3.525800 AGCACAAAAGGGGTGTCTTAT 57.474 42.857 0.00 0.00 38.51 1.73
917 920 4.650972 AGCACAAAAGGGGTGTCTTATA 57.349 40.909 0.00 0.00 38.51 0.98
983 986 8.687292 AAACTTATGCAGATACATCATCATGT 57.313 30.769 0.00 0.00 45.73 3.21
990 993 6.204108 TGCAGATACATCATCATGTGTGATTC 59.796 38.462 11.81 8.72 42.37 2.52
991 994 6.204108 GCAGATACATCATCATGTGTGATTCA 59.796 38.462 11.81 5.58 42.37 2.57
992 995 7.573627 CAGATACATCATCATGTGTGATTCAC 58.426 38.462 9.93 9.93 42.37 3.18
1011 1153 9.986833 TGATTCACTGATTTGATGTATTTAACG 57.013 29.630 0.00 0.00 0.00 3.18
1121 1263 1.242076 GGCATATGCATCCTGGACAC 58.758 55.000 28.07 3.87 44.36 3.67
1186 1328 1.754745 GAGTGTGAAGGCCTCCACA 59.245 57.895 22.49 22.49 40.56 4.17
1218 1360 0.677731 GCAGAACACCATGCTAGGCA 60.678 55.000 0.00 0.00 44.86 4.75
1285 1427 9.869757 CCCGATTTAGATAAAAACAAGGAAAAT 57.130 29.630 0.00 0.00 0.00 1.82
1371 1516 5.452078 TTTCCACATGTTCATCTGGAAAC 57.548 39.130 22.11 0.00 44.31 2.78
1378 1523 2.622942 TGTTCATCTGGAAACTTGTGGC 59.377 45.455 0.00 0.00 37.23 5.01
1385 1530 0.031178 GGAAACTTGTGGCTGTGCAG 59.969 55.000 0.00 0.00 0.00 4.41
1409 1554 3.824151 TGATGCATTTGTGTTGATCGTG 58.176 40.909 0.00 0.00 0.00 4.35
1520 1670 6.140786 GTGATCATGCAATGCAGTATTGTAG 58.859 40.000 14.98 3.90 46.21 2.74
1533 1683 5.911838 GCAGTATTGTAGTACTAGTAACCGC 59.088 44.000 3.61 0.00 33.29 5.68
1557 1707 8.600625 CGCAGTGTTTCTAGTAGCATAAATTTA 58.399 33.333 0.00 0.00 0.00 1.40
1603 1754 6.176183 ACAGTGAAGACAAATAGAAGGATGG 58.824 40.000 0.00 0.00 0.00 3.51
1606 1757 7.555554 CAGTGAAGACAAATAGAAGGATGGAAT 59.444 37.037 0.00 0.00 0.00 3.01
1635 1786 2.553602 GTGGTTGCATGATCTGAACACA 59.446 45.455 0.00 0.00 0.00 3.72
1738 1889 4.917415 CCTTGAAATTTTTGCTAGTGTCCG 59.083 41.667 0.00 0.00 0.00 4.79
1840 1991 6.537301 AGTGAAGTTGTTTATTCGTGTCTTGA 59.463 34.615 0.00 0.00 0.00 3.02
1858 2009 7.602644 GTGTCTTGACTCTTGGTATTAATGACA 59.397 37.037 0.00 0.00 0.00 3.58
1872 2023 3.827008 AATGACAGCAGTGATCGGTAT 57.173 42.857 0.00 0.00 0.00 2.73
1877 2028 2.930040 ACAGCAGTGATCGGTATTTTCG 59.070 45.455 0.00 0.00 0.00 3.46
1901 2052 5.108891 GCAGTTTTGTTATTTGTCGAACGAC 60.109 40.000 18.48 18.48 44.77 4.34
1938 2089 6.566079 ATCTCCAAATGACCACTGAGAATA 57.434 37.500 0.00 0.00 33.07 1.75
2012 2164 9.175060 CTGATCTGACATTAGTAACAACTATCG 57.825 37.037 0.00 0.00 0.00 2.92
2038 2190 6.263516 AGTTCATTGTGAAATCACCATCAG 57.736 37.500 10.83 0.00 45.88 2.90
2184 2337 4.966965 AGACGTACATGTTCTACTCCAG 57.033 45.455 2.30 0.00 0.00 3.86
2213 2366 1.541147 CGTCACCATGTTCAAGGCATT 59.459 47.619 0.00 0.00 0.00 3.56
2214 2367 2.414559 CGTCACCATGTTCAAGGCATTC 60.415 50.000 0.00 0.00 0.00 2.67
2215 2368 2.557924 GTCACCATGTTCAAGGCATTCA 59.442 45.455 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
91 92 1.741706 GTGCATGTGAGTCTGATTGGG 59.258 52.381 0.00 0.00 0.00 4.12
110 111 6.542370 CCTCATAACAAAATACTCGAATGGGT 59.458 38.462 0.00 0.00 0.00 4.51
149 150 3.261580 GAAAAGTATGGGGTTTGCATGC 58.738 45.455 11.82 11.82 0.00 4.06
187 189 4.575645 CGGTCTTCTCGGACTACTATTCTT 59.424 45.833 0.00 0.00 36.55 2.52
188 190 4.128643 CGGTCTTCTCGGACTACTATTCT 58.871 47.826 0.00 0.00 36.55 2.40
204 206 1.164041 CCGCTTGTCAAACCGGTCTT 61.164 55.000 8.04 1.26 36.18 3.01
212 214 3.390135 CTCAGTAGTTCCGCTTGTCAAA 58.610 45.455 0.00 0.00 0.00 2.69
213 215 2.866460 GCTCAGTAGTTCCGCTTGTCAA 60.866 50.000 0.00 0.00 0.00 3.18
214 216 1.336887 GCTCAGTAGTTCCGCTTGTCA 60.337 52.381 0.00 0.00 0.00 3.58
215 217 1.336887 TGCTCAGTAGTTCCGCTTGTC 60.337 52.381 0.00 0.00 0.00 3.18
216 218 0.679505 TGCTCAGTAGTTCCGCTTGT 59.320 50.000 0.00 0.00 0.00 3.16
217 219 1.354040 CTGCTCAGTAGTTCCGCTTG 58.646 55.000 0.00 0.00 0.00 4.01
218 220 0.390472 GCTGCTCAGTAGTTCCGCTT 60.390 55.000 0.00 0.00 0.00 4.68
219 221 1.216710 GCTGCTCAGTAGTTCCGCT 59.783 57.895 0.00 0.00 0.00 5.52
220 222 1.811679 GGCTGCTCAGTAGTTCCGC 60.812 63.158 0.00 0.00 0.00 5.54
221 223 1.517257 CGGCTGCTCAGTAGTTCCG 60.517 63.158 0.00 0.00 0.00 4.30
222 224 0.458716 GTCGGCTGCTCAGTAGTTCC 60.459 60.000 0.00 0.00 0.00 3.62
223 225 0.243907 TGTCGGCTGCTCAGTAGTTC 59.756 55.000 0.00 0.00 0.00 3.01
224 226 0.038159 GTGTCGGCTGCTCAGTAGTT 60.038 55.000 0.00 0.00 0.00 2.24
225 227 1.587054 GTGTCGGCTGCTCAGTAGT 59.413 57.895 0.00 0.00 0.00 2.73
226 228 1.153745 GGTGTCGGCTGCTCAGTAG 60.154 63.158 0.00 0.00 0.00 2.57
227 229 2.646175 GGGTGTCGGCTGCTCAGTA 61.646 63.158 0.00 0.00 0.00 2.74
228 230 4.008933 GGGTGTCGGCTGCTCAGT 62.009 66.667 0.00 0.00 0.00 3.41
229 231 4.007644 TGGGTGTCGGCTGCTCAG 62.008 66.667 0.00 0.00 0.00 3.35
230 232 4.314440 GTGGGTGTCGGCTGCTCA 62.314 66.667 0.00 0.00 0.00 4.26
231 233 4.008933 AGTGGGTGTCGGCTGCTC 62.009 66.667 0.00 0.00 0.00 4.26
232 234 4.320456 CAGTGGGTGTCGGCTGCT 62.320 66.667 0.00 0.00 0.00 4.24
238 240 4.308458 TTCGGCCAGTGGGTGTCG 62.308 66.667 12.15 0.00 36.17 4.35
239 241 2.668550 GTTCGGCCAGTGGGTGTC 60.669 66.667 12.15 0.00 36.17 3.67
240 242 2.351924 AATGTTCGGCCAGTGGGTGT 62.352 55.000 12.15 0.00 36.17 4.16
241 243 1.603455 AATGTTCGGCCAGTGGGTG 60.603 57.895 12.15 0.00 36.17 4.61
242 244 1.603455 CAATGTTCGGCCAGTGGGT 60.603 57.895 12.15 0.00 36.17 4.51
243 245 2.993471 GCAATGTTCGGCCAGTGGG 61.993 63.158 12.15 0.00 31.39 4.61
244 246 2.267351 TGCAATGTTCGGCCAGTGG 61.267 57.895 4.20 4.20 31.39 4.00
245 247 1.081242 GTGCAATGTTCGGCCAGTG 60.081 57.895 2.24 0.00 33.75 3.66
246 248 2.616330 CGTGCAATGTTCGGCCAGT 61.616 57.895 2.24 0.00 0.00 4.00
247 249 1.647545 ATCGTGCAATGTTCGGCCAG 61.648 55.000 2.24 0.00 0.00 4.85
248 250 1.673993 ATCGTGCAATGTTCGGCCA 60.674 52.632 2.24 0.00 0.00 5.36
249 251 1.226379 CATCGTGCAATGTTCGGCC 60.226 57.895 0.00 0.00 0.00 6.13
250 252 1.869132 GCATCGTGCAATGTTCGGC 60.869 57.895 0.00 0.00 44.26 5.54
251 253 4.365287 GCATCGTGCAATGTTCGG 57.635 55.556 0.00 0.00 44.26 4.30
260 262 0.248377 GCTGGATCAAAGCATCGTGC 60.248 55.000 13.25 2.28 45.46 5.34
261 263 0.027194 CGCTGGATCAAAGCATCGTG 59.973 55.000 17.02 0.36 40.86 4.35
262 264 1.091771 CCGCTGGATCAAAGCATCGT 61.092 55.000 17.02 0.00 40.86 3.73
263 265 1.091771 ACCGCTGGATCAAAGCATCG 61.092 55.000 17.02 8.06 40.86 3.84
264 266 0.659957 GACCGCTGGATCAAAGCATC 59.340 55.000 17.02 11.03 40.86 3.91
265 267 1.091771 CGACCGCTGGATCAAAGCAT 61.092 55.000 17.02 6.74 40.86 3.79
266 268 1.741401 CGACCGCTGGATCAAAGCA 60.741 57.895 17.02 0.00 40.86 3.91
267 269 2.464459 CCGACCGCTGGATCAAAGC 61.464 63.158 9.09 9.09 37.31 3.51
268 270 2.464459 GCCGACCGCTGGATCAAAG 61.464 63.158 0.00 0.00 0.00 2.77
269 271 2.435938 GCCGACCGCTGGATCAAA 60.436 61.111 0.00 0.00 0.00 2.69
270 272 4.467084 GGCCGACCGCTGGATCAA 62.467 66.667 0.00 0.00 37.74 2.57
272 274 4.593864 GAGGCCGACCGCTGGATC 62.594 72.222 0.00 0.00 42.76 3.36
278 280 4.083862 AAAGAGGAGGCCGACCGC 62.084 66.667 15.33 15.33 42.76 5.68
279 281 2.125512 CAAAGAGGAGGCCGACCG 60.126 66.667 14.56 0.00 42.76 4.79
280 282 1.376037 CACAAAGAGGAGGCCGACC 60.376 63.158 13.01 13.01 0.00 4.79
281 283 0.670854 GTCACAAAGAGGAGGCCGAC 60.671 60.000 0.00 0.00 0.00 4.79
282 284 1.118965 TGTCACAAAGAGGAGGCCGA 61.119 55.000 0.00 0.00 0.00 5.54
283 285 0.036010 ATGTCACAAAGAGGAGGCCG 60.036 55.000 0.00 0.00 0.00 6.13
284 286 1.457346 CATGTCACAAAGAGGAGGCC 58.543 55.000 0.00 0.00 0.00 5.19
285 287 0.807496 GCATGTCACAAAGAGGAGGC 59.193 55.000 0.00 0.00 0.00 4.70
286 288 2.189594 TGCATGTCACAAAGAGGAGG 57.810 50.000 0.00 0.00 0.00 4.30
287 289 3.079578 ACATGCATGTCACAAAGAGGAG 58.920 45.455 26.61 0.00 35.87 3.69
288 290 3.144657 ACATGCATGTCACAAAGAGGA 57.855 42.857 26.61 0.00 35.87 3.71
289 291 3.181517 CGTACATGCATGTCACAAAGAGG 60.182 47.826 34.54 17.14 41.97 3.69
290 292 3.679502 TCGTACATGCATGTCACAAAGAG 59.320 43.478 34.54 17.10 41.97 2.85
291 293 3.658709 TCGTACATGCATGTCACAAAGA 58.341 40.909 34.54 21.24 41.97 2.52
292 294 4.093261 TGATCGTACATGCATGTCACAAAG 59.907 41.667 34.54 19.37 41.97 2.77
293 295 3.999663 TGATCGTACATGCATGTCACAAA 59.000 39.130 34.54 15.32 41.97 2.83
294 296 3.594134 TGATCGTACATGCATGTCACAA 58.406 40.909 34.54 18.94 41.97 3.33
295 297 3.119173 TCTGATCGTACATGCATGTCACA 60.119 43.478 34.54 23.59 41.97 3.58
296 298 3.447742 TCTGATCGTACATGCATGTCAC 58.552 45.455 34.54 25.90 41.97 3.67
297 299 3.799281 TCTGATCGTACATGCATGTCA 57.201 42.857 34.54 23.58 41.97 3.58
298 300 4.301628 TGATCTGATCGTACATGCATGTC 58.698 43.478 34.54 23.28 41.97 3.06
299 301 4.202192 ACTGATCTGATCGTACATGCATGT 60.202 41.667 33.20 33.20 44.48 3.21
300 302 4.304939 ACTGATCTGATCGTACATGCATG 58.695 43.478 25.09 25.09 0.00 4.06
301 303 4.597404 ACTGATCTGATCGTACATGCAT 57.403 40.909 12.65 0.00 0.00 3.96
302 304 4.557496 GCTACTGATCTGATCGTACATGCA 60.557 45.833 12.65 0.00 0.00 3.96
303 305 3.917380 GCTACTGATCTGATCGTACATGC 59.083 47.826 12.65 12.25 0.00 4.06
304 306 5.113502 TGCTACTGATCTGATCGTACATG 57.886 43.478 12.65 0.00 0.00 3.21
305 307 5.391416 CGATGCTACTGATCTGATCGTACAT 60.391 44.000 12.65 17.84 0.00 2.29
306 308 4.083802 CGATGCTACTGATCTGATCGTACA 60.084 45.833 12.65 15.15 0.00 2.90
307 309 4.083749 ACGATGCTACTGATCTGATCGTAC 60.084 45.833 18.88 11.50 42.89 3.67
308 310 4.065789 ACGATGCTACTGATCTGATCGTA 58.934 43.478 18.88 14.67 42.89 3.43
309 311 2.881513 ACGATGCTACTGATCTGATCGT 59.118 45.455 16.27 16.27 40.65 3.73
310 312 3.487536 GACGATGCTACTGATCTGATCG 58.512 50.000 12.65 15.32 38.85 3.69
311 313 3.254411 TGGACGATGCTACTGATCTGATC 59.746 47.826 10.72 10.72 0.00 2.92
312 314 3.225940 TGGACGATGCTACTGATCTGAT 58.774 45.455 6.60 0.00 0.00 2.90
313 315 2.620585 CTGGACGATGCTACTGATCTGA 59.379 50.000 6.60 0.00 0.00 3.27
314 316 2.620585 TCTGGACGATGCTACTGATCTG 59.379 50.000 0.00 0.00 0.00 2.90
315 317 2.621055 GTCTGGACGATGCTACTGATCT 59.379 50.000 0.00 0.00 0.00 2.75
316 318 2.359214 TGTCTGGACGATGCTACTGATC 59.641 50.000 0.00 0.00 0.00 2.92
317 319 2.379005 TGTCTGGACGATGCTACTGAT 58.621 47.619 0.00 0.00 0.00 2.90
318 320 1.834188 TGTCTGGACGATGCTACTGA 58.166 50.000 0.00 0.00 0.00 3.41
319 321 2.736978 GATGTCTGGACGATGCTACTG 58.263 52.381 0.00 0.00 0.00 2.74
320 322 1.335182 CGATGTCTGGACGATGCTACT 59.665 52.381 0.00 0.00 0.00 2.57
321 323 1.600663 CCGATGTCTGGACGATGCTAC 60.601 57.143 0.00 0.00 0.00 3.58
322 324 0.668535 CCGATGTCTGGACGATGCTA 59.331 55.000 0.00 0.00 0.00 3.49
323 325 1.439228 CCGATGTCTGGACGATGCT 59.561 57.895 0.00 0.00 0.00 3.79
324 326 2.240500 GCCGATGTCTGGACGATGC 61.241 63.158 0.00 0.00 0.00 3.91
325 327 0.873312 CAGCCGATGTCTGGACGATG 60.873 60.000 0.00 0.00 0.00 3.84
326 328 1.439228 CAGCCGATGTCTGGACGAT 59.561 57.895 0.00 0.00 0.00 3.73
327 329 2.885113 CAGCCGATGTCTGGACGA 59.115 61.111 0.00 0.00 0.00 4.20
328 330 2.887568 GCAGCCGATGTCTGGACG 60.888 66.667 0.00 0.00 32.41 4.79
329 331 2.103042 GTGCAGCCGATGTCTGGAC 61.103 63.158 0.00 0.00 43.61 4.02
330 332 2.265739 GTGCAGCCGATGTCTGGA 59.734 61.111 0.00 0.00 32.41 3.86
331 333 2.046988 TGTGCAGCCGATGTCTGG 60.047 61.111 0.00 0.00 32.41 3.86
332 334 2.393768 GGTGTGCAGCCGATGTCTG 61.394 63.158 0.00 0.00 34.79 3.51
333 335 2.046892 GGTGTGCAGCCGATGTCT 60.047 61.111 0.00 0.00 0.00 3.41
348 350 0.179145 GCTGCTATACACACGACGGT 60.179 55.000 0.00 0.00 0.00 4.83
349 351 1.200474 CGCTGCTATACACACGACGG 61.200 60.000 0.00 0.00 0.00 4.79
350 352 1.798368 GCGCTGCTATACACACGACG 61.798 60.000 0.00 0.00 0.00 5.12
351 353 0.525668 AGCGCTGCTATACACACGAC 60.526 55.000 10.39 0.00 36.99 4.34
352 354 0.248498 GAGCGCTGCTATACACACGA 60.248 55.000 18.48 0.00 39.88 4.35
353 355 0.248661 AGAGCGCTGCTATACACACG 60.249 55.000 18.48 0.00 39.88 4.49
354 356 1.927895 AAGAGCGCTGCTATACACAC 58.072 50.000 18.48 0.00 39.88 3.82
355 357 2.094234 TCAAAGAGCGCTGCTATACACA 60.094 45.455 18.48 0.00 39.88 3.72
356 358 2.282820 GTCAAAGAGCGCTGCTATACAC 59.717 50.000 18.48 0.00 39.88 2.90
357 359 2.094234 TGTCAAAGAGCGCTGCTATACA 60.094 45.455 18.48 11.21 39.88 2.29
358 360 2.540515 TGTCAAAGAGCGCTGCTATAC 58.459 47.619 18.48 8.34 39.88 1.47
359 361 2.959507 TGTCAAAGAGCGCTGCTATA 57.040 45.000 18.48 0.00 39.88 1.31
360 362 2.005451 CTTGTCAAAGAGCGCTGCTAT 58.995 47.619 18.48 0.00 39.88 2.97
361 363 1.000843 TCTTGTCAAAGAGCGCTGCTA 59.999 47.619 18.48 0.00 39.88 3.49
362 364 0.250038 TCTTGTCAAAGAGCGCTGCT 60.250 50.000 18.48 9.38 43.88 4.24
363 365 2.238353 TCTTGTCAAAGAGCGCTGC 58.762 52.632 18.48 6.71 37.51 5.25
370 372 5.301045 TCCGAAGTTAGACTCTTGTCAAAGA 59.699 40.000 0.00 0.00 45.20 2.52
371 373 5.529791 TCCGAAGTTAGACTCTTGTCAAAG 58.470 41.667 0.00 0.00 45.20 2.77
378 380 5.944599 TGACATACTCCGAAGTTAGACTCTT 59.055 40.000 0.00 0.00 36.92 2.85
398 400 7.189087 TGTCCCTAGGCATTCTATATATGACA 58.811 38.462 2.05 3.94 33.28 3.58
400 402 6.325028 GCTGTCCCTAGGCATTCTATATATGA 59.675 42.308 2.05 0.00 0.00 2.15
412 414 3.318384 TTGCGCTGTCCCTAGGCA 61.318 61.111 9.73 0.00 0.00 4.75
413 415 2.820037 GTTGCGCTGTCCCTAGGC 60.820 66.667 9.73 0.00 0.00 3.93
481 483 3.431346 CCACAAGATCGTCTCACATCCAT 60.431 47.826 0.00 0.00 0.00 3.41
482 484 2.094026 CCACAAGATCGTCTCACATCCA 60.094 50.000 0.00 0.00 0.00 3.41
520 522 8.157476 AGTTTATATAAGGGTAAGCATGTCTGG 58.843 37.037 0.00 0.00 0.00 3.86
549 551 6.127647 ACAATCATGCGTCAAAATCCTTATGT 60.128 34.615 0.00 0.00 0.00 2.29
582 584 8.539674 GCAAGTTATGTGTAAACTTTTCTTTGG 58.460 33.333 0.00 0.00 42.97 3.28
585 587 9.816354 ATTGCAAGTTATGTGTAAACTTTTCTT 57.184 25.926 4.94 0.00 42.97 2.52
627 629 3.181476 GGCAACAACCATGAAGAACTTGT 60.181 43.478 0.00 0.00 0.00 3.16
850 853 7.833682 TGGTACCAATTGATATTCATGTCTTGT 59.166 33.333 13.60 0.00 0.00 3.16
883 886 9.095700 ACCCCTTTTGTGCTTTTATTTCTTATA 57.904 29.630 0.00 0.00 0.00 0.98
949 952 9.624373 ATGTATCTGCATAAGTTTTTCTCTCAT 57.376 29.630 0.00 0.00 0.00 2.90
967 970 7.573627 GTGAATCACACATGATGATGTATCTG 58.426 38.462 8.74 0.00 45.26 2.90
1121 1263 1.372004 CACATGTTGGCGCAACTGG 60.372 57.895 10.83 10.40 43.85 4.00
1202 1344 1.135286 GCTTTGCCTAGCATGGTGTTC 60.135 52.381 7.89 0.00 38.76 3.18
1218 1360 5.061853 CAGTCCAGACTATGCATATGCTTT 58.938 41.667 27.13 17.14 40.20 3.51
1362 1507 2.233271 CACAGCCACAAGTTTCCAGAT 58.767 47.619 0.00 0.00 0.00 2.90
1364 1509 0.031178 GCACAGCCACAAGTTTCCAG 59.969 55.000 0.00 0.00 0.00 3.86
1371 1516 0.740149 TCAAACTGCACAGCCACAAG 59.260 50.000 0.00 0.00 0.00 3.16
1385 1530 4.681025 ACGATCAACACAAATGCATCAAAC 59.319 37.500 0.00 0.00 0.00 2.93
1398 1543 1.806542 ACTGGATTGCACGATCAACAC 59.193 47.619 1.02 0.00 0.00 3.32
1409 1554 5.294060 ACAAAAACACATCAAACTGGATTGC 59.706 36.000 0.00 0.00 0.00 3.56
1520 1670 4.802999 AGAAACACTGCGGTTACTAGTAC 58.197 43.478 0.91 0.00 0.00 2.73
1557 1707 8.142551 ACTGTCAACGTTAGAAGTTAGAGAAAT 58.857 33.333 0.00 0.00 0.00 2.17
1603 1754 4.567971 TCATGCAACCACCAAAATCATTC 58.432 39.130 0.00 0.00 0.00 2.67
1606 1757 3.833650 AGATCATGCAACCACCAAAATCA 59.166 39.130 0.00 0.00 0.00 2.57
1738 1889 4.357142 TCGATAATTTAGTCACGGCTCAC 58.643 43.478 0.00 0.00 0.00 3.51
1831 1982 6.811665 TCATTAATACCAAGAGTCAAGACACG 59.188 38.462 2.72 0.00 0.00 4.49
1840 1991 5.877012 CACTGCTGTCATTAATACCAAGAGT 59.123 40.000 0.00 0.00 0.00 3.24
1858 2009 1.933853 GCGAAAATACCGATCACTGCT 59.066 47.619 0.00 0.00 0.00 4.24
1872 2023 6.028368 TCGACAAATAACAAAACTGCGAAAA 58.972 32.000 0.00 0.00 0.00 2.29
1877 2028 4.965158 TCGTTCGACAAATAACAAAACTGC 59.035 37.500 0.00 0.00 0.00 4.40
1901 2052 7.645340 GTCATTTGGAGATAATCATTTGTTCCG 59.355 37.037 0.00 0.00 0.00 4.30
2038 2190 5.351740 GTCTACAAGGGCTCAATTGACTTAC 59.648 44.000 3.38 0.00 0.00 2.34
2150 2303 2.775032 TACGTCTTTGGCCACCTCGC 62.775 60.000 3.88 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.