Multiple sequence alignment - TraesCS5A01G523000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G523000 chr5A 100.000 2651 0 0 1 2651 684321650 684324300 0.000000e+00 4896.0
1 TraesCS5A01G523000 chr5A 92.569 471 27 5 241 708 659259991 659259526 0.000000e+00 669.0
2 TraesCS5A01G523000 chr1A 96.768 1640 39 3 1017 2651 554467967 554466337 0.000000e+00 2723.0
3 TraesCS5A01G523000 chr1A 90.590 712 48 6 1 708 560190960 560191656 0.000000e+00 926.0
4 TraesCS5A01G523000 chr3B 96.520 1638 40 6 1017 2649 201503636 201505261 0.000000e+00 2693.0
5 TraesCS5A01G523000 chr3B 91.575 1638 96 17 1017 2638 460161328 460159717 0.000000e+00 2222.0
6 TraesCS5A01G523000 chr3B 95.758 165 6 1 2371 2535 416936389 416936552 5.630000e-67 265.0
7 TraesCS5A01G523000 chr3B 90.511 137 12 1 2321 2457 478049211 478049076 2.100000e-41 180.0
8 TraesCS5A01G523000 chr3B 97.727 44 1 0 2499 2542 636818125 636818168 2.830000e-10 76.8
9 TraesCS5A01G523000 chr1D 96.086 1635 39 3 1017 2651 254486784 254488393 0.000000e+00 2641.0
10 TraesCS5A01G523000 chr3D 97.857 1493 29 3 1160 2651 21894763 21896253 0.000000e+00 2577.0
11 TraesCS5A01G523000 chr2A 97.032 1415 36 3 1238 2651 276443796 276442387 0.000000e+00 2375.0
12 TraesCS5A01G523000 chr2A 97.359 568 15 0 428 995 216521402 216521969 0.000000e+00 966.0
13 TraesCS5A01G523000 chr2A 96.829 410 11 2 1 408 216520807 216521216 0.000000e+00 684.0
14 TraesCS5A01G523000 chr2A 94.911 393 18 2 1 391 30045558 30045166 4.850000e-172 614.0
15 TraesCS5A01G523000 chr2D 98.044 1329 22 2 1324 2651 628283044 628284369 0.000000e+00 2307.0
16 TraesCS5A01G523000 chr2D 89.563 709 42 12 1 708 487945347 487946024 0.000000e+00 870.0
17 TraesCS5A01G523000 chr2D 86.408 721 77 11 1 708 564604882 564604170 0.000000e+00 769.0
18 TraesCS5A01G523000 chr2D 94.885 391 19 1 1 390 102659732 102659342 6.270000e-171 610.0
19 TraesCS5A01G523000 chr5D 97.913 1150 17 4 1017 2166 483798495 483797353 0.000000e+00 1984.0
20 TraesCS5A01G523000 chr5D 97.874 1129 19 2 1017 2145 6210586 6209463 0.000000e+00 1947.0
21 TraesCS5A01G523000 chr5D 90.550 709 40 11 1 708 15668066 15668748 0.000000e+00 913.0
22 TraesCS5A01G523000 chr7A 91.268 710 54 5 1 708 288231041 288231744 0.000000e+00 961.0
23 TraesCS5A01G523000 chr6B 93.158 570 25 7 439 998 49398684 49398119 0.000000e+00 824.0
24 TraesCS5A01G523000 chr6B 93.396 318 16 2 241 557 690489304 690488991 1.440000e-127 466.0
25 TraesCS5A01G523000 chr5B 96.774 496 13 3 504 998 548331418 548330925 0.000000e+00 824.0
26 TraesCS5A01G523000 chr5B 97.714 350 8 0 28 377 548332003 548331654 1.050000e-168 603.0
27 TraesCS5A01G523000 chr6D 92.191 461 32 3 249 708 326411217 326411674 0.000000e+00 649.0
28 TraesCS5A01G523000 chr6A 95.178 394 17 2 1 393 99927305 99926913 2.900000e-174 621.0
29 TraesCS5A01G523000 chr3A 93.878 392 23 1 1 391 97497570 97497961 8.170000e-165 590.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G523000 chr5A 684321650 684324300 2650 False 4896.0 4896 100.000 1 2651 1 chr5A.!!$F1 2650
1 TraesCS5A01G523000 chr1A 554466337 554467967 1630 True 2723.0 2723 96.768 1017 2651 1 chr1A.!!$R1 1634
2 TraesCS5A01G523000 chr1A 560190960 560191656 696 False 926.0 926 90.590 1 708 1 chr1A.!!$F1 707
3 TraesCS5A01G523000 chr3B 201503636 201505261 1625 False 2693.0 2693 96.520 1017 2649 1 chr3B.!!$F1 1632
4 TraesCS5A01G523000 chr3B 460159717 460161328 1611 True 2222.0 2222 91.575 1017 2638 1 chr3B.!!$R1 1621
5 TraesCS5A01G523000 chr1D 254486784 254488393 1609 False 2641.0 2641 96.086 1017 2651 1 chr1D.!!$F1 1634
6 TraesCS5A01G523000 chr3D 21894763 21896253 1490 False 2577.0 2577 97.857 1160 2651 1 chr3D.!!$F1 1491
7 TraesCS5A01G523000 chr2A 276442387 276443796 1409 True 2375.0 2375 97.032 1238 2651 1 chr2A.!!$R2 1413
8 TraesCS5A01G523000 chr2A 216520807 216521969 1162 False 825.0 966 97.094 1 995 2 chr2A.!!$F1 994
9 TraesCS5A01G523000 chr2D 628283044 628284369 1325 False 2307.0 2307 98.044 1324 2651 1 chr2D.!!$F2 1327
10 TraesCS5A01G523000 chr2D 487945347 487946024 677 False 870.0 870 89.563 1 708 1 chr2D.!!$F1 707
11 TraesCS5A01G523000 chr2D 564604170 564604882 712 True 769.0 769 86.408 1 708 1 chr2D.!!$R2 707
12 TraesCS5A01G523000 chr5D 483797353 483798495 1142 True 1984.0 1984 97.913 1017 2166 1 chr5D.!!$R2 1149
13 TraesCS5A01G523000 chr5D 6209463 6210586 1123 True 1947.0 1947 97.874 1017 2145 1 chr5D.!!$R1 1128
14 TraesCS5A01G523000 chr5D 15668066 15668748 682 False 913.0 913 90.550 1 708 1 chr5D.!!$F1 707
15 TraesCS5A01G523000 chr7A 288231041 288231744 703 False 961.0 961 91.268 1 708 1 chr7A.!!$F1 707
16 TraesCS5A01G523000 chr6B 49398119 49398684 565 True 824.0 824 93.158 439 998 1 chr6B.!!$R1 559
17 TraesCS5A01G523000 chr5B 548330925 548332003 1078 True 713.5 824 97.244 28 998 2 chr5B.!!$R1 970

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 459 0.037326 TAGTGCTCGTTCTGGCCAAG 60.037 55.0 7.01 0.98 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1999 2481 6.239148 GCAAAAGAAAAAGAGGTCCAAGAGAT 60.239 38.462 0.0 0.0 0.0 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 57 7.004555 TCACCGAGGCATCTATATGTAAATT 57.995 36.000 0.00 0.00 35.38 1.82
146 153 0.734889 GCTGGCTGCGTGTATGAATT 59.265 50.000 0.00 0.00 0.00 2.17
151 158 4.919206 TGGCTGCGTGTATGAATTAAATG 58.081 39.130 0.00 0.00 0.00 2.32
156 163 7.744715 GGCTGCGTGTATGAATTAAATGTATAC 59.255 37.037 0.00 0.00 0.00 1.47
191 198 4.380867 CGAGAGGCCAATTTGTTGCTATTT 60.381 41.667 5.01 0.00 0.00 1.40
206 213 5.199024 TGCTATTTCAATGCACACAAAGT 57.801 34.783 0.00 0.00 0.00 2.66
236 243 9.851686 ATCTTGTATGAATCTACAAAATAGCCA 57.148 29.630 6.71 0.00 40.18 4.75
239 246 8.208718 TGTATGAATCTACAAAATAGCCACAC 57.791 34.615 0.00 0.00 0.00 3.82
255 262 4.876107 AGCCACACTTTATGAATAAGACGG 59.124 41.667 0.00 0.00 0.00 4.79
260 267 5.581085 ACACTTTATGAATAAGACGGAGCAC 59.419 40.000 0.00 0.00 0.00 4.40
261 268 5.580691 CACTTTATGAATAAGACGGAGCACA 59.419 40.000 0.00 0.00 0.00 4.57
262 269 6.092122 CACTTTATGAATAAGACGGAGCACAA 59.908 38.462 0.00 0.00 0.00 3.33
263 270 6.823689 ACTTTATGAATAAGACGGAGCACAAT 59.176 34.615 0.00 0.00 0.00 2.71
264 271 7.336931 ACTTTATGAATAAGACGGAGCACAATT 59.663 33.333 0.00 0.00 0.00 2.32
265 272 5.741388 ATGAATAAGACGGAGCACAATTC 57.259 39.130 0.00 0.00 0.00 2.17
266 273 4.832248 TGAATAAGACGGAGCACAATTCT 58.168 39.130 0.00 0.00 0.00 2.40
267 274 5.972935 TGAATAAGACGGAGCACAATTCTA 58.027 37.500 0.00 0.00 0.00 2.10
268 275 6.403049 TGAATAAGACGGAGCACAATTCTAA 58.597 36.000 0.00 0.00 0.00 2.10
269 276 6.876789 TGAATAAGACGGAGCACAATTCTAAA 59.123 34.615 0.00 0.00 0.00 1.85
270 277 7.389330 TGAATAAGACGGAGCACAATTCTAAAA 59.611 33.333 0.00 0.00 0.00 1.52
271 278 5.358298 AAGACGGAGCACAATTCTAAAAC 57.642 39.130 0.00 0.00 0.00 2.43
288 295 8.506168 TTCTAAAACATTATTCGATGGAAGCT 57.494 30.769 0.00 0.00 35.19 3.74
292 299 6.757897 AACATTATTCGATGGAAGCTTTGA 57.242 33.333 0.00 0.00 35.19 2.69
302 309 3.122297 TGGAAGCTTTGATTGCAAAACG 58.878 40.909 1.71 0.00 42.96 3.60
311 318 4.491554 TGATTGCAAAACGAACAAAACG 57.508 36.364 1.71 0.00 0.00 3.60
323 330 9.815936 AAAACGAACAAAACGGTTATATCTTAG 57.184 29.630 0.00 0.00 39.77 2.18
415 422 9.635520 CCATCTATCAAGGAATGAAAAATATGC 57.364 33.333 0.00 0.00 42.54 3.14
418 425 8.853126 TCTATCAAGGAATGAAAAATATGCAGG 58.147 33.333 0.00 0.00 42.54 4.85
450 457 1.292223 GTAGTGCTCGTTCTGGCCA 59.708 57.895 4.71 4.71 0.00 5.36
452 459 0.037326 TAGTGCTCGTTCTGGCCAAG 60.037 55.000 7.01 0.98 0.00 3.61
470 477 0.674895 AGGATGAGCGAACACCTTGC 60.675 55.000 0.00 0.00 0.00 4.01
481 490 2.949177 ACACCTTGCTGTATGAACCA 57.051 45.000 0.00 0.00 0.00 3.67
498 507 2.669569 ATGGACACACACGGCAGC 60.670 61.111 0.00 0.00 0.00 5.25
512 521 3.677648 CAGCTGGCCTGGTTGCAC 61.678 66.667 12.13 0.00 37.93 4.57
544 553 2.172372 CAGCATGCCTCGAGTGCTC 61.172 63.158 22.15 12.89 45.42 4.26
553 562 3.753434 CGAGTGCTCGCTCAGGGT 61.753 66.667 8.71 0.00 46.50 4.34
554 563 2.125753 GAGTGCTCGCTCAGGGTG 60.126 66.667 5.64 0.00 35.67 4.61
555 564 4.385405 AGTGCTCGCTCAGGGTGC 62.385 66.667 8.76 8.76 35.96 5.01
567 576 2.285442 GGGTGCCCCTACTGGTCT 60.285 66.667 3.16 0.00 41.34 3.85
568 577 2.670148 GGGTGCCCCTACTGGTCTG 61.670 68.421 3.16 0.00 41.34 3.51
569 578 2.670148 GGTGCCCCTACTGGTCTGG 61.670 68.421 0.00 0.00 0.00 3.86
570 579 1.918800 GTGCCCCTACTGGTCTGGT 60.919 63.158 0.00 0.00 0.00 4.00
571 580 1.151899 TGCCCCTACTGGTCTGGTT 60.152 57.895 0.00 0.00 0.00 3.67
572 581 1.198759 TGCCCCTACTGGTCTGGTTC 61.199 60.000 0.00 0.00 0.00 3.62
573 582 1.911702 GCCCCTACTGGTCTGGTTCC 61.912 65.000 0.00 0.00 0.00 3.62
574 583 1.614241 CCCCTACTGGTCTGGTTCCG 61.614 65.000 0.00 0.00 0.00 4.30
575 584 1.614241 CCCTACTGGTCTGGTTCCGG 61.614 65.000 0.00 0.00 37.36 5.14
576 585 0.613853 CCTACTGGTCTGGTTCCGGA 60.614 60.000 0.00 0.00 35.49 5.14
577 586 0.531200 CTACTGGTCTGGTTCCGGAC 59.469 60.000 19.26 19.26 40.54 4.79
578 587 0.178955 TACTGGTCTGGTTCCGGACA 60.179 55.000 25.88 14.49 42.41 4.02
579 588 1.004918 CTGGTCTGGTTCCGGACAC 60.005 63.158 25.88 17.65 42.41 3.67
580 589 1.754380 CTGGTCTGGTTCCGGACACA 61.754 60.000 25.88 20.27 42.41 3.72
581 590 1.004918 GGTCTGGTTCCGGACACAG 60.005 63.158 25.88 22.60 42.41 3.66
582 591 1.668151 GTCTGGTTCCGGACACAGC 60.668 63.158 23.41 16.67 40.85 4.40
583 592 1.837051 TCTGGTTCCGGACACAGCT 60.837 57.895 23.41 0.00 30.93 4.24
584 593 1.374758 CTGGTTCCGGACACAGCTC 60.375 63.158 18.53 3.66 0.00 4.09
585 594 2.099652 CTGGTTCCGGACACAGCTCA 62.100 60.000 18.53 7.22 0.00 4.26
586 595 1.374758 GGTTCCGGACACAGCTCAG 60.375 63.158 1.83 0.00 0.00 3.35
587 596 1.374758 GTTCCGGACACAGCTCAGG 60.375 63.158 1.83 0.00 0.00 3.86
588 597 1.533033 TTCCGGACACAGCTCAGGA 60.533 57.895 1.83 0.00 33.20 3.86
589 598 0.904865 TTCCGGACACAGCTCAGGAT 60.905 55.000 1.83 0.00 34.86 3.24
590 599 1.153489 CCGGACACAGCTCAGGATG 60.153 63.158 0.00 0.00 37.54 3.51
603 612 3.581265 TCAGGATGAATATGCCAAGCA 57.419 42.857 0.00 0.00 45.97 3.91
604 613 3.483421 TCAGGATGAATATGCCAAGCAG 58.517 45.455 0.00 0.00 45.97 4.24
605 614 2.557056 CAGGATGAATATGCCAAGCAGG 59.443 50.000 0.00 0.00 39.96 4.85
606 615 2.176364 AGGATGAATATGCCAAGCAGGT 59.824 45.455 0.00 0.00 43.65 4.00
607 616 3.395607 AGGATGAATATGCCAAGCAGGTA 59.604 43.478 0.00 0.00 43.65 3.08
608 617 3.755378 GGATGAATATGCCAAGCAGGTAG 59.245 47.826 0.00 0.00 43.65 3.18
609 618 2.575532 TGAATATGCCAAGCAGGTAGC 58.424 47.619 0.00 0.00 43.65 3.58
618 627 2.815647 GCAGGTAGCACGGCTGTC 60.816 66.667 0.00 0.00 44.79 3.51
619 628 2.656646 CAGGTAGCACGGCTGTCA 59.343 61.111 0.00 0.00 40.10 3.58
620 629 1.005037 CAGGTAGCACGGCTGTCAA 60.005 57.895 0.00 0.00 40.10 3.18
621 630 1.016130 CAGGTAGCACGGCTGTCAAG 61.016 60.000 0.00 0.00 40.10 3.02
622 631 1.741770 GGTAGCACGGCTGTCAAGG 60.742 63.158 0.00 0.00 40.10 3.61
623 632 2.047274 TAGCACGGCTGTCAAGGC 60.047 61.111 0.00 0.00 45.41 4.35
624 633 2.583441 TAGCACGGCTGTCAAGGCT 61.583 57.895 12.36 12.36 46.66 4.58
625 634 2.507110 TAGCACGGCTGTCAAGGCTC 62.507 60.000 11.20 0.00 46.66 4.70
626 635 2.031012 CACGGCTGTCAAGGCTCA 59.969 61.111 0.00 0.00 46.66 4.26
627 636 1.376424 CACGGCTGTCAAGGCTCAT 60.376 57.895 0.00 0.00 46.66 2.90
628 637 1.078848 ACGGCTGTCAAGGCTCATC 60.079 57.895 0.00 0.00 46.66 2.92
629 638 1.078918 CGGCTGTCAAGGCTCATCA 60.079 57.895 0.00 0.00 46.66 3.07
630 639 1.088340 CGGCTGTCAAGGCTCATCAG 61.088 60.000 0.00 0.00 46.66 2.90
631 640 0.251354 GGCTGTCAAGGCTCATCAGA 59.749 55.000 14.03 0.00 45.41 3.27
632 641 1.654317 GCTGTCAAGGCTCATCAGAG 58.346 55.000 14.03 0.00 44.96 3.35
640 649 3.947173 CTCATCAGAGCCGGGTCT 58.053 61.111 30.14 30.14 34.61 3.85
641 650 2.206635 CTCATCAGAGCCGGGTCTT 58.793 57.895 32.94 17.76 34.61 3.01
642 651 0.179089 CTCATCAGAGCCGGGTCTTG 60.179 60.000 32.94 27.61 34.61 3.02
643 652 0.614697 TCATCAGAGCCGGGTCTTGA 60.615 55.000 32.94 29.30 0.00 3.02
644 653 0.250234 CATCAGAGCCGGGTCTTGAA 59.750 55.000 32.94 21.00 0.00 2.69
645 654 0.250513 ATCAGAGCCGGGTCTTGAAC 59.749 55.000 32.94 6.54 0.00 3.18
646 655 1.118965 TCAGAGCCGGGTCTTGAACA 61.119 55.000 32.94 12.11 0.00 3.18
647 656 0.951040 CAGAGCCGGGTCTTGAACAC 60.951 60.000 32.94 4.89 0.00 3.32
653 662 2.928416 GGGTCTTGAACACGAAGGG 58.072 57.895 0.00 0.00 0.00 3.95
654 663 1.235281 GGGTCTTGAACACGAAGGGC 61.235 60.000 0.00 0.00 0.00 5.19
655 664 1.235281 GGTCTTGAACACGAAGGGCC 61.235 60.000 0.00 0.00 0.00 5.80
656 665 1.301401 TCTTGAACACGAAGGGCCG 60.301 57.895 0.00 0.00 0.00 6.13
657 666 2.281208 TTGAACACGAAGGGCCGG 60.281 61.111 0.00 0.00 0.00 6.13
658 667 3.109592 TTGAACACGAAGGGCCGGT 62.110 57.895 1.90 0.00 0.00 5.28
659 668 2.281276 GAACACGAAGGGCCGGTT 60.281 61.111 1.90 0.00 0.00 4.44
660 669 2.593436 AACACGAAGGGCCGGTTG 60.593 61.111 1.90 0.00 0.00 3.77
661 670 2.999739 GAACACGAAGGGCCGGTTGA 63.000 60.000 1.90 0.00 0.00 3.18
662 671 3.047877 CACGAAGGGCCGGTTGAC 61.048 66.667 1.90 0.00 0.00 3.18
663 672 4.324991 ACGAAGGGCCGGTTGACC 62.325 66.667 1.90 0.28 0.00 4.02
671 680 4.722700 CCGGTTGACCCAGCCCTG 62.723 72.222 0.00 0.00 30.81 4.45
674 683 4.284550 GTTGACCCAGCCCTGCCA 62.285 66.667 0.00 0.00 0.00 4.92
675 684 3.970410 TTGACCCAGCCCTGCCAG 61.970 66.667 0.00 0.00 0.00 4.85
680 689 3.655211 CCAGCCCTGCCAGGTCTT 61.655 66.667 10.47 0.00 31.93 3.01
681 690 2.360852 CAGCCCTGCCAGGTCTTG 60.361 66.667 10.47 0.99 31.93 3.02
682 691 2.530151 AGCCCTGCCAGGTCTTGA 60.530 61.111 10.47 0.00 31.93 3.02
683 692 2.156098 AGCCCTGCCAGGTCTTGAA 61.156 57.895 10.47 0.00 31.93 2.69
684 693 1.000396 GCCCTGCCAGGTCTTGAAT 60.000 57.895 10.47 0.00 31.93 2.57
685 694 1.318158 GCCCTGCCAGGTCTTGAATG 61.318 60.000 10.47 0.00 31.93 2.67
686 695 1.318158 CCCTGCCAGGTCTTGAATGC 61.318 60.000 10.47 0.00 31.93 3.56
687 696 1.318158 CCTGCCAGGTCTTGAATGCC 61.318 60.000 1.39 0.00 0.00 4.40
688 697 0.323178 CTGCCAGGTCTTGAATGCCT 60.323 55.000 0.00 0.00 0.00 4.75
689 698 0.991146 TGCCAGGTCTTGAATGCCTA 59.009 50.000 0.00 0.00 0.00 3.93
690 699 1.340017 TGCCAGGTCTTGAATGCCTAC 60.340 52.381 0.00 0.00 0.00 3.18
691 700 1.340017 GCCAGGTCTTGAATGCCTACA 60.340 52.381 0.00 0.00 0.00 2.74
692 701 2.636830 CCAGGTCTTGAATGCCTACAG 58.363 52.381 0.00 0.00 0.00 2.74
693 702 2.012673 CAGGTCTTGAATGCCTACAGC 58.987 52.381 0.00 0.00 44.14 4.40
704 713 1.604604 GCCTACAGCAACAAAGGTGA 58.395 50.000 0.00 0.00 42.97 4.02
705 714 1.953686 GCCTACAGCAACAAAGGTGAA 59.046 47.619 0.00 0.00 42.97 3.18
706 715 2.558359 GCCTACAGCAACAAAGGTGAAT 59.442 45.455 0.00 0.00 42.97 2.57
707 716 3.756434 GCCTACAGCAACAAAGGTGAATA 59.244 43.478 0.00 0.00 42.97 1.75
708 717 4.379499 GCCTACAGCAACAAAGGTGAATAC 60.379 45.833 0.00 0.00 42.97 1.89
709 718 7.334056 GCCTACAGCAACAAAGGTGAATACC 62.334 48.000 0.00 0.00 44.17 2.73
722 731 4.969816 GGTGAATACCAGTTTCATCAACG 58.030 43.478 0.00 0.00 46.71 4.10
723 732 4.403453 GTGAATACCAGTTTCATCAACGC 58.597 43.478 0.00 0.00 40.75 4.84
724 733 4.068599 TGAATACCAGTTTCATCAACGCA 58.931 39.130 0.00 0.00 40.75 5.24
725 734 4.699735 TGAATACCAGTTTCATCAACGCAT 59.300 37.500 0.00 0.00 40.75 4.73
726 735 5.182950 TGAATACCAGTTTCATCAACGCATT 59.817 36.000 0.00 0.00 40.75 3.56
727 736 3.287312 ACCAGTTTCATCAACGCATTG 57.713 42.857 0.00 0.00 40.75 2.82
728 737 1.987770 CCAGTTTCATCAACGCATTGC 59.012 47.619 0.00 0.00 40.75 3.56
729 738 2.607526 CCAGTTTCATCAACGCATTGCA 60.608 45.455 9.69 0.00 40.75 4.08
730 739 2.406024 CAGTTTCATCAACGCATTGCAC 59.594 45.455 9.69 0.00 40.75 4.57
731 740 2.034432 AGTTTCATCAACGCATTGCACA 59.966 40.909 9.69 0.00 40.75 4.57
732 741 2.988493 GTTTCATCAACGCATTGCACAT 59.012 40.909 9.69 0.00 35.63 3.21
733 742 2.265647 TCATCAACGCATTGCACATG 57.734 45.000 9.69 4.36 35.63 3.21
734 743 1.540707 TCATCAACGCATTGCACATGT 59.459 42.857 9.69 0.00 35.63 3.21
735 744 2.030096 TCATCAACGCATTGCACATGTT 60.030 40.909 9.69 1.71 35.63 2.71
736 745 2.505628 TCAACGCATTGCACATGTTT 57.494 40.000 9.69 0.00 35.63 2.83
737 746 2.819115 TCAACGCATTGCACATGTTTT 58.181 38.095 9.69 2.80 35.63 2.43
738 747 3.193263 TCAACGCATTGCACATGTTTTT 58.807 36.364 9.69 1.02 35.63 1.94
739 748 3.001026 TCAACGCATTGCACATGTTTTTG 59.999 39.130 9.69 9.76 35.63 2.44
740 749 2.548875 ACGCATTGCACATGTTTTTGT 58.451 38.095 9.69 0.00 0.00 2.83
741 750 2.935201 ACGCATTGCACATGTTTTTGTT 59.065 36.364 9.69 0.00 0.00 2.83
742 751 3.373439 ACGCATTGCACATGTTTTTGTTT 59.627 34.783 9.69 0.00 0.00 2.83
743 752 4.568359 ACGCATTGCACATGTTTTTGTTTA 59.432 33.333 9.69 0.00 0.00 2.01
744 753 5.236047 ACGCATTGCACATGTTTTTGTTTAT 59.764 32.000 9.69 0.00 0.00 1.40
745 754 6.134730 CGCATTGCACATGTTTTTGTTTATT 58.865 32.000 9.69 0.00 0.00 1.40
746 755 6.632035 CGCATTGCACATGTTTTTGTTTATTT 59.368 30.769 9.69 0.00 0.00 1.40
747 756 7.356557 CGCATTGCACATGTTTTTGTTTATTTG 60.357 33.333 9.69 0.00 0.00 2.32
748 757 7.642978 GCATTGCACATGTTTTTGTTTATTTGA 59.357 29.630 3.15 0.00 0.00 2.69
749 758 9.499585 CATTGCACATGTTTTTGTTTATTTGAA 57.500 25.926 0.00 0.00 0.00 2.69
750 759 8.886816 TTGCACATGTTTTTGTTTATTTGAAC 57.113 26.923 0.00 0.00 0.00 3.18
751 760 8.261492 TGCACATGTTTTTGTTTATTTGAACT 57.739 26.923 0.00 0.00 0.00 3.01
752 761 8.725148 TGCACATGTTTTTGTTTATTTGAACTT 58.275 25.926 0.00 0.00 0.00 2.66
753 762 8.997960 GCACATGTTTTTGTTTATTTGAACTTG 58.002 29.630 0.00 0.00 0.00 3.16
754 763 9.488124 CACATGTTTTTGTTTATTTGAACTTGG 57.512 29.630 0.00 0.00 30.85 3.61
755 764 9.225436 ACATGTTTTTGTTTATTTGAACTTGGT 57.775 25.926 0.00 0.00 30.85 3.67
758 767 9.273016 TGTTTTTGTTTATTTGAACTTGGTTGA 57.727 25.926 0.00 0.00 0.00 3.18
761 770 8.430801 TTTGTTTATTTGAACTTGGTTGATGG 57.569 30.769 0.00 0.00 0.00 3.51
762 771 7.118496 TGTTTATTTGAACTTGGTTGATGGT 57.882 32.000 0.00 0.00 0.00 3.55
763 772 7.206687 TGTTTATTTGAACTTGGTTGATGGTC 58.793 34.615 0.00 0.00 0.00 4.02
764 773 7.069331 TGTTTATTTGAACTTGGTTGATGGTCT 59.931 33.333 0.00 0.00 0.00 3.85
765 774 8.573035 GTTTATTTGAACTTGGTTGATGGTCTA 58.427 33.333 0.00 0.00 0.00 2.59
766 775 8.877864 TTATTTGAACTTGGTTGATGGTCTAT 57.122 30.769 0.00 0.00 0.00 1.98
767 776 6.817765 TTTGAACTTGGTTGATGGTCTATC 57.182 37.500 0.00 0.00 36.29 2.08
768 777 4.843728 TGAACTTGGTTGATGGTCTATCC 58.156 43.478 0.00 0.00 34.77 2.59
781 790 3.504520 TGGTCTATCCAAAAACGGAAAGC 59.495 43.478 0.00 0.00 44.12 3.51
782 791 3.504520 GGTCTATCCAAAAACGGAAAGCA 59.495 43.478 0.00 0.00 38.95 3.91
783 792 4.022676 GGTCTATCCAAAAACGGAAAGCAA 60.023 41.667 0.00 0.00 38.95 3.91
784 793 5.508320 GGTCTATCCAAAAACGGAAAGCAAA 60.508 40.000 0.00 0.00 38.95 3.68
785 794 6.156519 GTCTATCCAAAAACGGAAAGCAAAT 58.843 36.000 0.00 0.00 38.95 2.32
786 795 7.309920 GTCTATCCAAAAACGGAAAGCAAATA 58.690 34.615 0.00 0.00 38.95 1.40
787 796 7.484959 GTCTATCCAAAAACGGAAAGCAAATAG 59.515 37.037 0.00 0.00 38.95 1.73
788 797 5.523438 TCCAAAAACGGAAAGCAAATAGT 57.477 34.783 0.00 0.00 29.93 2.12
789 798 5.285651 TCCAAAAACGGAAAGCAAATAGTG 58.714 37.500 0.00 0.00 29.93 2.74
790 799 5.067936 TCCAAAAACGGAAAGCAAATAGTGA 59.932 36.000 0.00 0.00 29.93 3.41
791 800 5.402270 CCAAAAACGGAAAGCAAATAGTGAG 59.598 40.000 0.00 0.00 0.00 3.51
792 801 3.831715 AACGGAAAGCAAATAGTGAGC 57.168 42.857 0.00 0.00 0.00 4.26
793 802 2.084546 ACGGAAAGCAAATAGTGAGCC 58.915 47.619 0.00 0.00 0.00 4.70
794 803 1.062587 CGGAAAGCAAATAGTGAGCCG 59.937 52.381 0.00 0.00 0.00 5.52
795 804 2.084546 GGAAAGCAAATAGTGAGCCGT 58.915 47.619 0.00 0.00 0.00 5.68
796 805 3.267483 GGAAAGCAAATAGTGAGCCGTA 58.733 45.455 0.00 0.00 0.00 4.02
797 806 3.877508 GGAAAGCAAATAGTGAGCCGTAT 59.122 43.478 0.00 0.00 0.00 3.06
798 807 4.260784 GGAAAGCAAATAGTGAGCCGTATG 60.261 45.833 0.00 0.00 0.00 2.39
799 808 3.819564 AGCAAATAGTGAGCCGTATGA 57.180 42.857 0.00 0.00 0.00 2.15
800 809 4.137116 AGCAAATAGTGAGCCGTATGAA 57.863 40.909 0.00 0.00 0.00 2.57
801 810 4.122776 AGCAAATAGTGAGCCGTATGAAG 58.877 43.478 0.00 0.00 0.00 3.02
802 811 3.303395 GCAAATAGTGAGCCGTATGAAGC 60.303 47.826 0.00 0.00 0.00 3.86
803 812 3.819564 AATAGTGAGCCGTATGAAGCA 57.180 42.857 0.00 0.00 0.00 3.91
804 813 4.342862 AATAGTGAGCCGTATGAAGCAT 57.657 40.909 0.00 0.00 0.00 3.79
805 814 1.945387 AGTGAGCCGTATGAAGCATG 58.055 50.000 0.00 0.00 0.00 4.06
806 815 0.940126 GTGAGCCGTATGAAGCATGG 59.060 55.000 0.00 0.00 0.00 3.66
807 816 0.179048 TGAGCCGTATGAAGCATGGG 60.179 55.000 0.00 0.00 0.00 4.00
808 817 0.179045 GAGCCGTATGAAGCATGGGT 60.179 55.000 0.00 0.00 0.00 4.51
809 818 1.070134 GAGCCGTATGAAGCATGGGTA 59.930 52.381 0.00 0.00 0.00 3.69
810 819 1.488812 AGCCGTATGAAGCATGGGTAA 59.511 47.619 0.00 0.00 0.00 2.85
811 820 1.873591 GCCGTATGAAGCATGGGTAAG 59.126 52.381 0.00 0.00 0.00 2.34
812 821 2.494059 CCGTATGAAGCATGGGTAAGG 58.506 52.381 0.00 0.00 0.00 2.69
813 822 2.104111 CCGTATGAAGCATGGGTAAGGA 59.896 50.000 0.00 0.00 0.00 3.36
814 823 3.433031 CCGTATGAAGCATGGGTAAGGAA 60.433 47.826 0.00 0.00 0.00 3.36
815 824 3.560068 CGTATGAAGCATGGGTAAGGAAC 59.440 47.826 0.00 0.00 0.00 3.62
833 842 4.517075 AGGAACTTCACAAAAGAAGCTAGC 59.483 41.667 6.62 6.62 46.97 3.42
834 843 4.517075 GGAACTTCACAAAAGAAGCTAGCT 59.483 41.667 12.68 12.68 46.97 3.32
835 844 5.429957 AACTTCACAAAAGAAGCTAGCTG 57.570 39.130 20.16 8.00 46.97 4.24
836 845 4.708177 ACTTCACAAAAGAAGCTAGCTGA 58.292 39.130 20.16 6.46 46.97 4.26
837 846 4.513318 ACTTCACAAAAGAAGCTAGCTGAC 59.487 41.667 20.16 15.52 46.97 3.51
838 847 4.342862 TCACAAAAGAAGCTAGCTGACT 57.657 40.909 20.16 17.58 0.00 3.41
839 848 4.060900 TCACAAAAGAAGCTAGCTGACTG 58.939 43.478 20.16 13.57 0.00 3.51
840 849 2.810852 ACAAAAGAAGCTAGCTGACTGC 59.189 45.455 20.16 5.88 43.29 4.40
841 850 2.810274 CAAAAGAAGCTAGCTGACTGCA 59.190 45.455 20.16 0.00 45.94 4.41
842 851 2.383368 AAGAAGCTAGCTGACTGCAG 57.617 50.000 20.16 13.48 45.94 4.41
843 852 1.554836 AGAAGCTAGCTGACTGCAGA 58.445 50.000 23.35 0.00 45.17 4.26
844 853 1.898472 AGAAGCTAGCTGACTGCAGAA 59.102 47.619 23.35 7.24 45.17 3.02
845 854 2.301296 AGAAGCTAGCTGACTGCAGAAA 59.699 45.455 23.35 6.83 45.17 2.52
846 855 3.055240 AGAAGCTAGCTGACTGCAGAAAT 60.055 43.478 23.35 0.00 45.17 2.17
847 856 2.903798 AGCTAGCTGACTGCAGAAATC 58.096 47.619 23.35 8.43 45.17 2.17
848 857 2.235650 AGCTAGCTGACTGCAGAAATCA 59.764 45.455 23.35 13.08 45.17 2.57
849 858 3.005554 GCTAGCTGACTGCAGAAATCAA 58.994 45.455 23.35 0.00 45.17 2.57
850 859 3.181512 GCTAGCTGACTGCAGAAATCAAC 60.182 47.826 23.35 9.39 45.17 3.18
851 860 2.157738 AGCTGACTGCAGAAATCAACC 58.842 47.619 23.35 7.74 45.17 3.77
852 861 2.157738 GCTGACTGCAGAAATCAACCT 58.842 47.619 23.35 0.00 45.17 3.50
853 862 2.555757 GCTGACTGCAGAAATCAACCTT 59.444 45.455 23.35 0.00 45.17 3.50
854 863 3.005155 GCTGACTGCAGAAATCAACCTTT 59.995 43.478 23.35 0.00 45.17 3.11
855 864 4.500375 GCTGACTGCAGAAATCAACCTTTT 60.500 41.667 23.35 0.00 45.17 2.27
856 865 5.186996 TGACTGCAGAAATCAACCTTTTC 57.813 39.130 23.35 2.73 34.08 2.29
857 866 4.889409 TGACTGCAGAAATCAACCTTTTCT 59.111 37.500 23.35 0.00 42.63 2.52
858 867 5.360714 TGACTGCAGAAATCAACCTTTTCTT 59.639 36.000 23.35 0.00 40.53 2.52
859 868 6.127366 TGACTGCAGAAATCAACCTTTTCTTT 60.127 34.615 23.35 0.00 40.53 2.52
860 869 6.643388 ACTGCAGAAATCAACCTTTTCTTTT 58.357 32.000 23.35 0.00 40.53 2.27
861 870 6.758416 ACTGCAGAAATCAACCTTTTCTTTTC 59.242 34.615 23.35 0.00 40.53 2.29
862 871 6.048509 TGCAGAAATCAACCTTTTCTTTTCC 58.951 36.000 0.00 0.00 40.53 3.13
863 872 5.175673 GCAGAAATCAACCTTTTCTTTTCCG 59.824 40.000 0.00 0.00 40.53 4.30
864 873 6.273071 CAGAAATCAACCTTTTCTTTTCCGT 58.727 36.000 0.00 0.00 40.53 4.69
865 874 6.198966 CAGAAATCAACCTTTTCTTTTCCGTG 59.801 38.462 0.00 0.00 40.53 4.94
866 875 3.430333 TCAACCTTTTCTTTTCCGTGC 57.570 42.857 0.00 0.00 0.00 5.34
867 876 2.100087 TCAACCTTTTCTTTTCCGTGCC 59.900 45.455 0.00 0.00 0.00 5.01
868 877 0.666374 ACCTTTTCTTTTCCGTGCCG 59.334 50.000 0.00 0.00 0.00 5.69
869 878 0.948678 CCTTTTCTTTTCCGTGCCGA 59.051 50.000 0.00 0.00 0.00 5.54
870 879 1.539827 CCTTTTCTTTTCCGTGCCGAT 59.460 47.619 0.00 0.00 0.00 4.18
871 880 2.745281 CCTTTTCTTTTCCGTGCCGATA 59.255 45.455 0.00 0.00 0.00 2.92
872 881 3.189702 CCTTTTCTTTTCCGTGCCGATAA 59.810 43.478 0.00 0.00 0.00 1.75
873 882 4.320641 CCTTTTCTTTTCCGTGCCGATAAA 60.321 41.667 0.00 0.00 0.00 1.40
874 883 4.832590 TTTCTTTTCCGTGCCGATAAAA 57.167 36.364 0.00 3.06 0.00 1.52
875 884 4.832590 TTCTTTTCCGTGCCGATAAAAA 57.167 36.364 0.00 1.10 0.00 1.94
876 885 5.379732 TTCTTTTCCGTGCCGATAAAAAT 57.620 34.783 0.00 0.00 0.00 1.82
877 886 6.497785 TTCTTTTCCGTGCCGATAAAAATA 57.502 33.333 0.00 0.00 0.00 1.40
878 887 6.687081 TCTTTTCCGTGCCGATAAAAATAT 57.313 33.333 0.00 0.00 0.00 1.28
879 888 6.721321 TCTTTTCCGTGCCGATAAAAATATC 58.279 36.000 0.00 0.00 0.00 1.63
880 889 6.316640 TCTTTTCCGTGCCGATAAAAATATCA 59.683 34.615 0.00 0.00 0.00 2.15
881 890 6.627395 TTTCCGTGCCGATAAAAATATCAT 57.373 33.333 0.00 0.00 0.00 2.45
882 891 6.627395 TTCCGTGCCGATAAAAATATCATT 57.373 33.333 0.00 0.00 0.00 2.57
883 892 6.236017 TCCGTGCCGATAAAAATATCATTC 57.764 37.500 0.00 0.00 0.00 2.67
884 893 5.995282 TCCGTGCCGATAAAAATATCATTCT 59.005 36.000 0.00 0.00 0.00 2.40
885 894 7.156000 TCCGTGCCGATAAAAATATCATTCTA 58.844 34.615 0.00 0.00 0.00 2.10
886 895 7.822334 TCCGTGCCGATAAAAATATCATTCTAT 59.178 33.333 0.00 0.00 0.00 1.98
887 896 8.450964 CCGTGCCGATAAAAATATCATTCTATT 58.549 33.333 0.00 0.00 0.00 1.73
888 897 9.478019 CGTGCCGATAAAAATATCATTCTATTC 57.522 33.333 0.00 0.00 0.00 1.75
919 928 7.667557 TCTATAAAGATGATCGTGTTAAGGGG 58.332 38.462 0.00 0.00 0.00 4.79
920 929 4.837093 AAAGATGATCGTGTTAAGGGGA 57.163 40.909 0.00 0.00 0.00 4.81
921 930 4.837093 AAGATGATCGTGTTAAGGGGAA 57.163 40.909 0.00 0.00 0.00 3.97
922 931 5.373812 AAGATGATCGTGTTAAGGGGAAT 57.626 39.130 0.00 0.00 0.00 3.01
923 932 6.494666 AAGATGATCGTGTTAAGGGGAATA 57.505 37.500 0.00 0.00 0.00 1.75
924 933 6.688073 AGATGATCGTGTTAAGGGGAATAT 57.312 37.500 0.00 0.00 0.00 1.28
925 934 7.079451 AGATGATCGTGTTAAGGGGAATATT 57.921 36.000 0.00 0.00 0.00 1.28
926 935 6.936900 AGATGATCGTGTTAAGGGGAATATTG 59.063 38.462 0.00 0.00 0.00 1.90
927 936 5.996644 TGATCGTGTTAAGGGGAATATTGT 58.003 37.500 0.00 0.00 0.00 2.71
928 937 6.053005 TGATCGTGTTAAGGGGAATATTGTC 58.947 40.000 0.00 0.00 0.00 3.18
929 938 5.423704 TCGTGTTAAGGGGAATATTGTCA 57.576 39.130 0.00 0.00 0.00 3.58
930 939 5.996644 TCGTGTTAAGGGGAATATTGTCAT 58.003 37.500 0.00 0.00 0.00 3.06
931 940 6.053005 TCGTGTTAAGGGGAATATTGTCATC 58.947 40.000 0.00 0.00 0.00 2.92
932 941 5.820423 CGTGTTAAGGGGAATATTGTCATCA 59.180 40.000 0.00 0.00 0.00 3.07
933 942 6.486657 CGTGTTAAGGGGAATATTGTCATCAT 59.513 38.462 0.00 0.00 0.00 2.45
934 943 7.013274 CGTGTTAAGGGGAATATTGTCATCATT 59.987 37.037 0.00 0.00 0.00 2.57
935 944 8.137437 GTGTTAAGGGGAATATTGTCATCATTG 58.863 37.037 0.00 0.00 0.00 2.82
936 945 7.287466 TGTTAAGGGGAATATTGTCATCATTGG 59.713 37.037 0.00 0.00 0.00 3.16
937 946 5.668135 AGGGGAATATTGTCATCATTGGA 57.332 39.130 0.00 0.00 0.00 3.53
938 947 5.388654 AGGGGAATATTGTCATCATTGGAC 58.611 41.667 0.00 0.00 35.83 4.02
939 948 5.135020 AGGGGAATATTGTCATCATTGGACT 59.865 40.000 0.00 0.00 36.26 3.85
940 949 5.835280 GGGGAATATTGTCATCATTGGACTT 59.165 40.000 0.00 0.00 36.26 3.01
941 950 6.015940 GGGGAATATTGTCATCATTGGACTTC 60.016 42.308 0.00 0.00 36.26 3.01
942 951 6.015940 GGGAATATTGTCATCATTGGACTTCC 60.016 42.308 0.00 0.00 36.18 3.46
943 952 6.774656 GGAATATTGTCATCATTGGACTTCCT 59.225 38.462 0.00 0.00 35.05 3.36
944 953 7.939039 GGAATATTGTCATCATTGGACTTCCTA 59.061 37.037 0.00 0.00 35.05 2.94
945 954 9.342308 GAATATTGTCATCATTGGACTTCCTAA 57.658 33.333 0.00 0.00 36.26 2.69
946 955 8.682936 ATATTGTCATCATTGGACTTCCTAAC 57.317 34.615 0.00 0.00 36.26 2.34
947 956 4.503910 TGTCATCATTGGACTTCCTAACG 58.496 43.478 0.00 0.00 36.26 3.18
948 957 4.020573 TGTCATCATTGGACTTCCTAACGT 60.021 41.667 0.00 0.00 36.26 3.99
949 958 4.935808 GTCATCATTGGACTTCCTAACGTT 59.064 41.667 5.88 5.88 36.82 3.99
950 959 6.103997 GTCATCATTGGACTTCCTAACGTTA 58.896 40.000 7.94 7.94 36.82 3.18
951 960 6.255887 GTCATCATTGGACTTCCTAACGTTAG 59.744 42.308 25.33 25.33 36.82 2.34
952 961 4.501071 TCATTGGACTTCCTAACGTTAGC 58.499 43.478 26.57 14.07 36.82 3.09
953 962 4.020928 TCATTGGACTTCCTAACGTTAGCA 60.021 41.667 26.57 12.48 36.82 3.49
954 963 4.546829 TTGGACTTCCTAACGTTAGCAT 57.453 40.909 26.57 12.83 36.82 3.79
955 964 5.664294 TTGGACTTCCTAACGTTAGCATA 57.336 39.130 26.57 13.11 36.82 3.14
956 965 5.664294 TGGACTTCCTAACGTTAGCATAA 57.336 39.130 26.57 18.50 36.82 1.90
957 966 6.040209 TGGACTTCCTAACGTTAGCATAAA 57.960 37.500 26.57 16.46 36.82 1.40
958 967 6.465948 TGGACTTCCTAACGTTAGCATAAAA 58.534 36.000 26.57 14.46 36.82 1.52
959 968 6.935771 TGGACTTCCTAACGTTAGCATAAAAA 59.064 34.615 26.57 13.04 36.82 1.94
984 993 7.816945 AATATGCAACTAACAAAACTCATGC 57.183 32.000 0.00 0.00 0.00 4.06
985 994 3.626977 TGCAACTAACAAAACTCATGCG 58.373 40.909 0.00 0.00 35.40 4.73
986 995 2.979813 GCAACTAACAAAACTCATGCGG 59.020 45.455 0.00 0.00 0.00 5.69
987 996 3.550030 GCAACTAACAAAACTCATGCGGT 60.550 43.478 0.00 0.00 0.00 5.68
988 997 3.896648 ACTAACAAAACTCATGCGGTG 57.103 42.857 0.00 0.00 0.00 4.94
989 998 3.211045 ACTAACAAAACTCATGCGGTGT 58.789 40.909 0.00 0.00 0.00 4.16
990 999 4.382291 ACTAACAAAACTCATGCGGTGTA 58.618 39.130 0.00 0.00 0.00 2.90
991 1000 3.619233 AACAAAACTCATGCGGTGTAC 57.381 42.857 0.00 0.00 0.00 2.90
992 1001 2.566913 ACAAAACTCATGCGGTGTACA 58.433 42.857 0.00 0.00 0.00 2.90
993 1002 2.289547 ACAAAACTCATGCGGTGTACAC 59.710 45.455 18.01 18.01 0.00 2.90
994 1003 2.248280 AAACTCATGCGGTGTACACA 57.752 45.000 26.51 7.73 0.00 3.72
995 1004 2.248280 AACTCATGCGGTGTACACAA 57.752 45.000 26.51 12.43 0.00 3.33
996 1005 2.248280 ACTCATGCGGTGTACACAAA 57.752 45.000 26.51 12.08 0.00 2.83
997 1006 2.566913 ACTCATGCGGTGTACACAAAA 58.433 42.857 26.51 11.72 0.00 2.44
998 1007 2.946329 ACTCATGCGGTGTACACAAAAA 59.054 40.909 26.51 9.97 0.00 1.94
999 1008 3.568007 ACTCATGCGGTGTACACAAAAAT 59.432 39.130 26.51 11.74 0.00 1.82
1000 1009 4.757657 ACTCATGCGGTGTACACAAAAATA 59.242 37.500 26.51 7.59 0.00 1.40
1001 1010 5.414454 ACTCATGCGGTGTACACAAAAATAT 59.586 36.000 26.51 9.40 0.00 1.28
1002 1011 5.635866 TCATGCGGTGTACACAAAAATATG 58.364 37.500 26.51 18.84 0.00 1.78
1003 1012 3.827625 TGCGGTGTACACAAAAATATGC 58.172 40.909 26.51 15.68 0.00 3.14
1004 1013 3.253432 TGCGGTGTACACAAAAATATGCA 59.747 39.130 26.51 17.69 0.00 3.96
1005 1014 4.230657 GCGGTGTACACAAAAATATGCAA 58.769 39.130 26.51 0.00 0.00 4.08
1006 1015 4.089351 GCGGTGTACACAAAAATATGCAAC 59.911 41.667 26.51 4.36 0.00 4.17
1007 1016 5.457140 CGGTGTACACAAAAATATGCAACT 58.543 37.500 26.51 0.00 0.00 3.16
1008 1017 6.604012 CGGTGTACACAAAAATATGCAACTA 58.396 36.000 26.51 0.00 0.00 2.24
1009 1018 7.078851 CGGTGTACACAAAAATATGCAACTAA 58.921 34.615 26.51 0.00 0.00 2.24
1010 1019 7.060174 CGGTGTACACAAAAATATGCAACTAAC 59.940 37.037 26.51 2.62 0.00 2.34
1011 1020 7.863375 GGTGTACACAAAAATATGCAACTAACA 59.137 33.333 26.51 0.00 0.00 2.41
1012 1021 9.239002 GTGTACACAAAAATATGCAACTAACAA 57.761 29.630 21.14 0.00 0.00 2.83
1013 1022 9.803315 TGTACACAAAAATATGCAACTAACAAA 57.197 25.926 0.00 0.00 0.00 2.83
1141 1150 4.322057 AACATTCTTGTGATAGGCCCTT 57.678 40.909 0.00 0.00 35.83 3.95
1403 1418 0.247460 TCAGATGGACGCCAAGTGAG 59.753 55.000 2.68 0.00 36.95 3.51
2185 2709 7.898014 AAGTAAACTCTTCCATTGAAGGTTT 57.102 32.000 19.97 19.97 46.61 3.27
2330 2861 9.017509 TGATCTCTTTTTCTTGTTGCTTCATAT 57.982 29.630 0.00 0.00 0.00 1.78
2487 3022 7.698550 CGATTACTATAGAGATGAACCCAATCG 59.301 40.741 6.78 0.00 35.52 3.34
2553 3088 4.341520 AGCAATACCAGCTACAGTACCTAC 59.658 45.833 0.00 0.00 41.32 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 16 6.371548 CCTCGGTGAATACTCAAGAATTTTGA 59.628 38.462 3.95 3.95 31.88 2.69
54 57 7.403312 TGTCTTTGATTTTTGTCTCTTCCAA 57.597 32.000 0.00 0.00 0.00 3.53
146 153 9.878667 TCTCGGTCTCATTTTTGTATACATTTA 57.121 29.630 6.36 0.00 0.00 1.40
151 158 5.234543 GCCTCTCGGTCTCATTTTTGTATAC 59.765 44.000 0.00 0.00 0.00 1.47
156 163 1.740025 GGCCTCTCGGTCTCATTTTTG 59.260 52.381 0.00 0.00 30.13 2.44
158 165 0.984230 TGGCCTCTCGGTCTCATTTT 59.016 50.000 3.32 0.00 35.36 1.82
169 176 4.725790 AATAGCAACAAATTGGCCTCTC 57.274 40.909 3.32 0.00 36.23 3.20
179 186 5.354767 TGTGTGCATTGAAATAGCAACAAA 58.645 33.333 0.00 0.00 40.35 2.83
191 198 4.314961 AGATACGACTTTGTGTGCATTGA 58.685 39.130 0.00 0.00 0.00 2.57
236 243 5.581085 GTGCTCCGTCTTATTCATAAAGTGT 59.419 40.000 0.00 0.00 0.00 3.55
239 246 6.662414 TTGTGCTCCGTCTTATTCATAAAG 57.338 37.500 0.00 0.00 0.00 1.85
255 262 9.722056 ATCGAATAATGTTTTAGAATTGTGCTC 57.278 29.630 0.00 0.00 0.00 4.26
261 268 9.736023 GCTTCCATCGAATAATGTTTTAGAATT 57.264 29.630 0.00 0.00 0.00 2.17
262 269 9.125026 AGCTTCCATCGAATAATGTTTTAGAAT 57.875 29.630 0.00 0.00 0.00 2.40
263 270 8.506168 AGCTTCCATCGAATAATGTTTTAGAA 57.494 30.769 0.00 0.00 0.00 2.10
264 271 8.506168 AAGCTTCCATCGAATAATGTTTTAGA 57.494 30.769 0.00 0.00 0.00 2.10
265 272 9.013490 CAAAGCTTCCATCGAATAATGTTTTAG 57.987 33.333 0.00 0.00 0.00 1.85
266 273 8.735315 TCAAAGCTTCCATCGAATAATGTTTTA 58.265 29.630 0.00 0.00 0.00 1.52
267 274 7.601856 TCAAAGCTTCCATCGAATAATGTTTT 58.398 30.769 0.00 0.00 0.00 2.43
268 275 7.156876 TCAAAGCTTCCATCGAATAATGTTT 57.843 32.000 0.00 0.00 0.00 2.83
269 276 6.757897 TCAAAGCTTCCATCGAATAATGTT 57.242 33.333 0.00 0.00 0.00 2.71
270 277 6.949352 ATCAAAGCTTCCATCGAATAATGT 57.051 33.333 0.00 0.00 0.00 2.71
271 278 6.143438 GCAATCAAAGCTTCCATCGAATAATG 59.857 38.462 0.00 0.00 0.00 1.90
288 295 5.308927 CGTTTTGTTCGTTTTGCAATCAAA 58.691 33.333 0.00 3.58 40.17 2.69
292 299 3.254892 ACCGTTTTGTTCGTTTTGCAAT 58.745 36.364 0.00 0.00 0.00 3.56
302 309 9.537848 CAACACTAAGATATAACCGTTTTGTTC 57.462 33.333 0.00 0.00 0.00 3.18
311 318 8.788325 ACCTCAAACAACACTAAGATATAACC 57.212 34.615 0.00 0.00 0.00 2.85
323 330 7.136119 TCGAATTATGAAACCTCAAACAACAC 58.864 34.615 0.00 0.00 34.49 3.32
338 345 9.825972 GACAATGTTTTTCTTCTCGAATTATGA 57.174 29.630 0.00 0.00 0.00 2.15
427 434 2.600731 CCAGAACGAGCACTACAAGAG 58.399 52.381 0.00 0.00 0.00 2.85
435 442 2.328099 CCTTGGCCAGAACGAGCAC 61.328 63.158 5.11 0.00 0.00 4.40
450 457 1.813513 CAAGGTGTTCGCTCATCCTT 58.186 50.000 0.00 0.00 38.79 3.36
452 459 0.674895 AGCAAGGTGTTCGCTCATCC 60.675 55.000 0.00 0.00 0.00 3.51
470 477 3.436704 GTGTGTGTCCATGGTTCATACAG 59.563 47.826 27.24 0.00 34.85 2.74
481 490 2.669569 GCTGCCGTGTGTGTCCAT 60.670 61.111 0.00 0.00 0.00 3.41
498 507 3.052082 CGAGTGCAACCAGGCCAG 61.052 66.667 5.01 0.00 37.80 4.85
512 521 1.462283 CATGCTGTCAAGTTGGACGAG 59.538 52.381 2.34 2.90 40.72 4.18
555 564 1.614241 CGGAACCAGACCAGTAGGGG 61.614 65.000 0.00 0.00 42.91 4.79
556 565 1.614241 CCGGAACCAGACCAGTAGGG 61.614 65.000 0.00 0.00 44.81 3.53
557 566 0.613853 TCCGGAACCAGACCAGTAGG 60.614 60.000 0.00 0.00 42.21 3.18
558 567 0.531200 GTCCGGAACCAGACCAGTAG 59.469 60.000 5.23 0.00 0.00 2.57
559 568 0.178955 TGTCCGGAACCAGACCAGTA 60.179 55.000 5.23 0.00 31.76 2.74
560 569 1.458777 TGTCCGGAACCAGACCAGT 60.459 57.895 5.23 0.00 31.76 4.00
561 570 1.004918 GTGTCCGGAACCAGACCAG 60.005 63.158 5.23 0.00 31.76 4.00
562 571 1.754380 CTGTGTCCGGAACCAGACCA 61.754 60.000 21.53 5.27 31.50 4.02
563 572 1.004918 CTGTGTCCGGAACCAGACC 60.005 63.158 21.53 2.63 31.50 3.85
564 573 1.668151 GCTGTGTCCGGAACCAGAC 60.668 63.158 27.41 17.65 31.50 3.51
565 574 1.816863 GAGCTGTGTCCGGAACCAGA 61.817 60.000 27.41 12.58 31.50 3.86
566 575 1.374758 GAGCTGTGTCCGGAACCAG 60.375 63.158 21.67 21.67 32.45 4.00
567 576 2.099652 CTGAGCTGTGTCCGGAACCA 62.100 60.000 5.23 4.71 0.00 3.67
568 577 1.374758 CTGAGCTGTGTCCGGAACC 60.375 63.158 5.23 0.00 0.00 3.62
569 578 1.374758 CCTGAGCTGTGTCCGGAAC 60.375 63.158 5.23 7.82 0.00 3.62
570 579 0.904865 ATCCTGAGCTGTGTCCGGAA 60.905 55.000 5.23 0.00 33.96 4.30
571 580 1.305297 ATCCTGAGCTGTGTCCGGA 60.305 57.895 0.00 0.00 34.67 5.14
572 581 1.153489 CATCCTGAGCTGTGTCCGG 60.153 63.158 0.00 0.00 0.00 5.14
573 582 0.247460 TTCATCCTGAGCTGTGTCCG 59.753 55.000 0.00 0.00 0.00 4.79
574 583 2.706339 ATTCATCCTGAGCTGTGTCC 57.294 50.000 0.00 0.00 0.00 4.02
575 584 3.497640 GCATATTCATCCTGAGCTGTGTC 59.502 47.826 0.00 0.00 0.00 3.67
576 585 3.474600 GCATATTCATCCTGAGCTGTGT 58.525 45.455 0.00 0.00 0.00 3.72
577 586 2.812591 GGCATATTCATCCTGAGCTGTG 59.187 50.000 0.00 0.00 0.00 3.66
578 587 2.440627 TGGCATATTCATCCTGAGCTGT 59.559 45.455 0.00 0.00 0.00 4.40
579 588 3.136009 TGGCATATTCATCCTGAGCTG 57.864 47.619 0.00 0.00 0.00 4.24
580 589 3.752665 CTTGGCATATTCATCCTGAGCT 58.247 45.455 0.00 0.00 0.00 4.09
581 590 2.228343 GCTTGGCATATTCATCCTGAGC 59.772 50.000 0.00 0.00 0.00 4.26
582 591 3.483421 TGCTTGGCATATTCATCCTGAG 58.517 45.455 0.00 0.00 31.71 3.35
583 592 3.483421 CTGCTTGGCATATTCATCCTGA 58.517 45.455 0.00 0.00 38.13 3.86
584 593 2.557056 CCTGCTTGGCATATTCATCCTG 59.443 50.000 0.00 0.00 38.13 3.86
585 594 2.176364 ACCTGCTTGGCATATTCATCCT 59.824 45.455 0.00 0.00 38.13 3.24
586 595 2.590821 ACCTGCTTGGCATATTCATCC 58.409 47.619 0.00 0.00 38.13 3.51
587 596 3.190118 GCTACCTGCTTGGCATATTCATC 59.810 47.826 0.00 0.00 38.13 2.92
588 597 3.152341 GCTACCTGCTTGGCATATTCAT 58.848 45.455 0.00 0.00 38.13 2.57
589 598 2.092484 TGCTACCTGCTTGGCATATTCA 60.092 45.455 0.00 0.00 43.37 2.57
590 599 2.291741 GTGCTACCTGCTTGGCATATTC 59.708 50.000 0.00 0.00 43.37 1.75
591 600 2.301346 GTGCTACCTGCTTGGCATATT 58.699 47.619 0.00 0.00 43.37 1.28
592 601 1.811558 CGTGCTACCTGCTTGGCATAT 60.812 52.381 0.00 0.00 43.37 1.78
593 602 0.461870 CGTGCTACCTGCTTGGCATA 60.462 55.000 0.00 0.00 43.37 3.14
594 603 1.746615 CGTGCTACCTGCTTGGCAT 60.747 57.895 0.00 0.00 43.37 4.40
595 604 2.358615 CGTGCTACCTGCTTGGCA 60.359 61.111 0.00 0.00 43.37 4.92
596 605 3.127533 CCGTGCTACCTGCTTGGC 61.128 66.667 0.00 0.00 43.37 4.52
597 606 3.127533 GCCGTGCTACCTGCTTGG 61.128 66.667 0.00 0.00 43.37 3.61
598 607 2.046892 AGCCGTGCTACCTGCTTG 60.047 61.111 0.00 0.00 43.37 4.01
599 608 2.046892 CAGCCGTGCTACCTGCTT 60.047 61.111 0.00 0.00 43.37 3.91
600 609 3.302347 GACAGCCGTGCTACCTGCT 62.302 63.158 0.00 0.00 43.37 4.24
601 610 2.815647 GACAGCCGTGCTACCTGC 60.816 66.667 0.00 0.00 36.40 4.85
602 611 1.005037 TTGACAGCCGTGCTACCTG 60.005 57.895 0.00 0.00 36.40 4.00
603 612 1.293498 CTTGACAGCCGTGCTACCT 59.707 57.895 0.00 0.00 36.40 3.08
604 613 1.741770 CCTTGACAGCCGTGCTACC 60.742 63.158 0.00 0.00 36.40 3.18
605 614 2.391389 GCCTTGACAGCCGTGCTAC 61.391 63.158 0.00 0.00 36.40 3.58
606 615 2.047274 GCCTTGACAGCCGTGCTA 60.047 61.111 0.00 0.00 36.40 3.49
607 616 3.890936 GAGCCTTGACAGCCGTGCT 62.891 63.158 0.00 0.00 40.77 4.40
608 617 3.426568 GAGCCTTGACAGCCGTGC 61.427 66.667 0.00 0.00 0.00 5.34
609 618 1.364626 GATGAGCCTTGACAGCCGTG 61.365 60.000 0.00 0.00 0.00 4.94
610 619 1.078848 GATGAGCCTTGACAGCCGT 60.079 57.895 0.00 0.00 0.00 5.68
611 620 1.078918 TGATGAGCCTTGACAGCCG 60.079 57.895 0.00 0.00 0.00 5.52
612 621 0.251354 TCTGATGAGCCTTGACAGCC 59.749 55.000 0.00 0.00 0.00 4.85
613 622 1.654317 CTCTGATGAGCCTTGACAGC 58.346 55.000 0.00 0.00 33.12 4.40
623 632 0.179089 CAAGACCCGGCTCTGATGAG 60.179 60.000 0.00 0.00 42.96 2.90
624 633 0.614697 TCAAGACCCGGCTCTGATGA 60.615 55.000 0.00 0.00 0.00 2.92
625 634 0.250234 TTCAAGACCCGGCTCTGATG 59.750 55.000 0.00 0.00 0.00 3.07
626 635 0.250513 GTTCAAGACCCGGCTCTGAT 59.749 55.000 0.00 0.00 0.00 2.90
627 636 1.118965 TGTTCAAGACCCGGCTCTGA 61.119 55.000 0.00 0.00 0.00 3.27
628 637 0.951040 GTGTTCAAGACCCGGCTCTG 60.951 60.000 0.00 0.00 0.00 3.35
629 638 1.371558 GTGTTCAAGACCCGGCTCT 59.628 57.895 0.00 0.00 0.00 4.09
630 639 2.027625 CGTGTTCAAGACCCGGCTC 61.028 63.158 0.00 0.00 0.00 4.70
631 640 2.030562 CGTGTTCAAGACCCGGCT 59.969 61.111 0.00 0.00 0.00 5.52
632 641 1.566018 CTTCGTGTTCAAGACCCGGC 61.566 60.000 0.00 0.00 29.62 6.13
633 642 0.949105 CCTTCGTGTTCAAGACCCGG 60.949 60.000 0.00 0.00 29.62 5.73
634 643 0.949105 CCCTTCGTGTTCAAGACCCG 60.949 60.000 0.00 0.00 0.00 5.28
635 644 1.235281 GCCCTTCGTGTTCAAGACCC 61.235 60.000 0.00 0.00 0.00 4.46
636 645 1.235281 GGCCCTTCGTGTTCAAGACC 61.235 60.000 0.00 0.00 0.00 3.85
637 646 1.566018 CGGCCCTTCGTGTTCAAGAC 61.566 60.000 0.00 0.00 0.00 3.01
638 647 1.301401 CGGCCCTTCGTGTTCAAGA 60.301 57.895 0.00 0.00 0.00 3.02
639 648 2.325082 CCGGCCCTTCGTGTTCAAG 61.325 63.158 0.00 0.00 0.00 3.02
640 649 2.281208 CCGGCCCTTCGTGTTCAA 60.281 61.111 0.00 0.00 0.00 2.69
641 650 3.109592 AACCGGCCCTTCGTGTTCA 62.110 57.895 0.00 0.00 0.00 3.18
642 651 2.281276 AACCGGCCCTTCGTGTTC 60.281 61.111 0.00 0.00 0.00 3.18
643 652 2.593436 CAACCGGCCCTTCGTGTT 60.593 61.111 0.00 0.00 0.00 3.32
644 653 3.552384 TCAACCGGCCCTTCGTGT 61.552 61.111 0.00 0.00 0.00 4.49
645 654 3.047877 GTCAACCGGCCCTTCGTG 61.048 66.667 0.00 0.00 0.00 4.35
646 655 4.324991 GGTCAACCGGCCCTTCGT 62.325 66.667 0.00 0.00 0.00 3.85
648 657 3.920093 CTGGGTCAACCGGCCCTTC 62.920 68.421 15.11 0.00 45.06 3.46
649 658 3.966543 CTGGGTCAACCGGCCCTT 61.967 66.667 15.11 0.00 45.06 3.95
657 666 4.284550 TGGCAGGGCTGGGTCAAC 62.285 66.667 0.00 0.00 0.00 3.18
658 667 3.970410 CTGGCAGGGCTGGGTCAA 61.970 66.667 6.61 0.00 0.00 3.18
666 675 1.000396 ATTCAAGACCTGGCAGGGC 60.000 57.895 35.34 34.18 46.64 5.19
667 676 1.318158 GCATTCAAGACCTGGCAGGG 61.318 60.000 35.34 18.83 40.58 4.45
668 677 1.318158 GGCATTCAAGACCTGGCAGG 61.318 60.000 31.62 31.62 42.49 4.85
669 678 0.323178 AGGCATTCAAGACCTGGCAG 60.323 55.000 7.75 7.75 37.87 4.85
670 679 0.991146 TAGGCATTCAAGACCTGGCA 59.009 50.000 0.00 0.00 37.87 4.92
671 680 1.340017 TGTAGGCATTCAAGACCTGGC 60.340 52.381 0.00 0.00 34.92 4.85
672 681 2.636830 CTGTAGGCATTCAAGACCTGG 58.363 52.381 0.00 0.00 34.92 4.45
673 682 2.012673 GCTGTAGGCATTCAAGACCTG 58.987 52.381 0.00 0.00 41.35 4.00
674 683 2.409948 GCTGTAGGCATTCAAGACCT 57.590 50.000 0.00 0.00 41.35 3.85
685 694 1.604604 TCACCTTTGTTGCTGTAGGC 58.395 50.000 0.00 0.00 42.22 3.93
686 695 4.156008 GGTATTCACCTTTGTTGCTGTAGG 59.844 45.833 0.00 0.00 42.11 3.18
687 696 4.759693 TGGTATTCACCTTTGTTGCTGTAG 59.240 41.667 0.00 0.00 45.98 2.74
688 697 4.720046 TGGTATTCACCTTTGTTGCTGTA 58.280 39.130 0.00 0.00 45.98 2.74
689 698 3.561143 TGGTATTCACCTTTGTTGCTGT 58.439 40.909 0.00 0.00 45.98 4.40
690 699 3.569701 ACTGGTATTCACCTTTGTTGCTG 59.430 43.478 0.00 0.00 45.98 4.41
691 700 3.832527 ACTGGTATTCACCTTTGTTGCT 58.167 40.909 0.00 0.00 45.98 3.91
692 701 4.584327 AACTGGTATTCACCTTTGTTGC 57.416 40.909 0.00 0.00 45.98 4.17
693 702 6.142818 TGAAACTGGTATTCACCTTTGTTG 57.857 37.500 0.00 0.00 45.98 3.33
694 703 6.549364 TGATGAAACTGGTATTCACCTTTGTT 59.451 34.615 0.00 0.00 45.98 2.83
695 704 6.068010 TGATGAAACTGGTATTCACCTTTGT 58.932 36.000 0.00 0.00 45.98 2.83
696 705 6.573664 TGATGAAACTGGTATTCACCTTTG 57.426 37.500 0.00 0.00 45.98 2.77
697 706 6.293955 CGTTGATGAAACTGGTATTCACCTTT 60.294 38.462 0.00 0.00 39.43 3.11
698 707 5.181245 CGTTGATGAAACTGGTATTCACCTT 59.819 40.000 0.00 0.00 39.43 3.50
699 708 4.695455 CGTTGATGAAACTGGTATTCACCT 59.305 41.667 0.00 0.00 39.43 4.00
700 709 4.671766 GCGTTGATGAAACTGGTATTCACC 60.672 45.833 0.00 0.00 39.43 4.02
701 710 4.083537 TGCGTTGATGAAACTGGTATTCAC 60.084 41.667 0.00 0.00 39.43 3.18
702 711 4.068599 TGCGTTGATGAAACTGGTATTCA 58.931 39.130 0.00 0.00 40.76 2.57
703 712 4.678509 TGCGTTGATGAAACTGGTATTC 57.321 40.909 0.00 0.00 36.56 1.75
704 713 5.401550 CAATGCGTTGATGAAACTGGTATT 58.598 37.500 13.63 0.00 37.53 1.89
705 714 4.675146 GCAATGCGTTGATGAAACTGGTAT 60.675 41.667 22.81 0.00 37.53 2.73
706 715 3.365868 GCAATGCGTTGATGAAACTGGTA 60.366 43.478 22.81 0.00 37.53 3.25
707 716 2.607771 GCAATGCGTTGATGAAACTGGT 60.608 45.455 22.81 0.00 37.53 4.00
708 717 1.987770 GCAATGCGTTGATGAAACTGG 59.012 47.619 22.81 0.00 37.53 4.00
709 718 2.406024 GTGCAATGCGTTGATGAAACTG 59.594 45.455 22.81 0.00 37.53 3.16
710 719 2.034432 TGTGCAATGCGTTGATGAAACT 59.966 40.909 22.81 0.00 37.53 2.66
711 720 2.392821 TGTGCAATGCGTTGATGAAAC 58.607 42.857 22.81 11.29 37.53 2.78
712 721 2.789491 TGTGCAATGCGTTGATGAAA 57.211 40.000 22.81 0.00 37.53 2.69
713 722 2.030096 ACATGTGCAATGCGTTGATGAA 60.030 40.909 22.81 4.67 37.53 2.57
714 723 1.540707 ACATGTGCAATGCGTTGATGA 59.459 42.857 22.81 4.71 37.53 2.92
715 724 1.985334 ACATGTGCAATGCGTTGATG 58.015 45.000 22.81 17.79 37.53 3.07
716 725 2.728690 AACATGTGCAATGCGTTGAT 57.271 40.000 22.81 4.18 37.53 2.57
717 726 2.505628 AAACATGTGCAATGCGTTGA 57.494 40.000 22.81 1.64 37.53 3.18
718 727 3.242349 ACAAAAACATGTGCAATGCGTTG 60.242 39.130 14.54 14.54 38.39 4.10
719 728 2.935201 ACAAAAACATGTGCAATGCGTT 59.065 36.364 0.00 0.00 30.82 4.84
720 729 2.548875 ACAAAAACATGTGCAATGCGT 58.451 38.095 0.00 0.00 30.82 5.24
721 730 3.589061 AACAAAAACATGTGCAATGCG 57.411 38.095 0.00 0.00 32.81 4.73
722 731 7.642978 TCAAATAAACAAAAACATGTGCAATGC 59.357 29.630 0.00 0.00 32.81 3.56
723 732 9.499585 TTCAAATAAACAAAAACATGTGCAATG 57.500 25.926 0.00 0.00 32.81 2.82
724 733 9.500864 GTTCAAATAAACAAAAACATGTGCAAT 57.499 25.926 0.00 0.00 32.81 3.56
725 734 8.725148 AGTTCAAATAAACAAAAACATGTGCAA 58.275 25.926 0.00 0.00 32.81 4.08
726 735 8.261492 AGTTCAAATAAACAAAAACATGTGCA 57.739 26.923 0.00 0.00 32.81 4.57
727 736 8.997960 CAAGTTCAAATAAACAAAAACATGTGC 58.002 29.630 0.00 0.00 32.81 4.57
728 737 9.488124 CCAAGTTCAAATAAACAAAAACATGTG 57.512 29.630 0.00 0.00 32.81 3.21
729 738 9.225436 ACCAAGTTCAAATAAACAAAAACATGT 57.775 25.926 0.00 0.00 34.24 3.21
732 741 9.273016 TCAACCAAGTTCAAATAAACAAAAACA 57.727 25.926 0.00 0.00 0.00 2.83
735 744 8.887717 CCATCAACCAAGTTCAAATAAACAAAA 58.112 29.630 0.00 0.00 0.00 2.44
736 745 8.043710 ACCATCAACCAAGTTCAAATAAACAAA 58.956 29.630 0.00 0.00 0.00 2.83
737 746 7.560368 ACCATCAACCAAGTTCAAATAAACAA 58.440 30.769 0.00 0.00 0.00 2.83
738 747 7.069331 AGACCATCAACCAAGTTCAAATAAACA 59.931 33.333 0.00 0.00 0.00 2.83
739 748 7.433680 AGACCATCAACCAAGTTCAAATAAAC 58.566 34.615 0.00 0.00 0.00 2.01
740 749 7.595819 AGACCATCAACCAAGTTCAAATAAA 57.404 32.000 0.00 0.00 0.00 1.40
741 750 8.877864 ATAGACCATCAACCAAGTTCAAATAA 57.122 30.769 0.00 0.00 0.00 1.40
742 751 7.556275 GGATAGACCATCAACCAAGTTCAAATA 59.444 37.037 0.00 0.00 38.79 1.40
743 752 6.378280 GGATAGACCATCAACCAAGTTCAAAT 59.622 38.462 0.00 0.00 38.79 2.32
744 753 5.710099 GGATAGACCATCAACCAAGTTCAAA 59.290 40.000 0.00 0.00 38.79 2.69
745 754 5.222027 TGGATAGACCATCAACCAAGTTCAA 60.222 40.000 0.00 0.00 44.64 2.69
746 755 4.288366 TGGATAGACCATCAACCAAGTTCA 59.712 41.667 0.00 0.00 44.64 3.18
747 756 4.843728 TGGATAGACCATCAACCAAGTTC 58.156 43.478 0.00 0.00 44.64 3.01
748 757 4.927267 TGGATAGACCATCAACCAAGTT 57.073 40.909 0.00 0.00 44.64 2.66
760 769 3.504520 TGCTTTCCGTTTTTGGATAGACC 59.495 43.478 4.70 0.00 38.83 3.85
761 770 4.759516 TGCTTTCCGTTTTTGGATAGAC 57.240 40.909 4.70 0.00 38.83 2.59
762 771 5.776173 TTTGCTTTCCGTTTTTGGATAGA 57.224 34.783 4.70 0.00 38.83 1.98
763 772 7.273381 CACTATTTGCTTTCCGTTTTTGGATAG 59.727 37.037 0.00 0.00 39.33 2.08
764 773 7.040340 TCACTATTTGCTTTCCGTTTTTGGATA 60.040 33.333 0.00 0.00 38.00 2.59
765 774 5.925969 CACTATTTGCTTTCCGTTTTTGGAT 59.074 36.000 0.00 0.00 38.00 3.41
766 775 5.067936 TCACTATTTGCTTTCCGTTTTTGGA 59.932 36.000 0.00 0.00 35.83 3.53
767 776 5.285651 TCACTATTTGCTTTCCGTTTTTGG 58.714 37.500 0.00 0.00 0.00 3.28
768 777 5.107875 GCTCACTATTTGCTTTCCGTTTTTG 60.108 40.000 0.00 0.00 0.00 2.44
769 778 4.982295 GCTCACTATTTGCTTTCCGTTTTT 59.018 37.500 0.00 0.00 0.00 1.94
770 779 4.546570 GCTCACTATTTGCTTTCCGTTTT 58.453 39.130 0.00 0.00 0.00 2.43
771 780 3.057526 GGCTCACTATTTGCTTTCCGTTT 60.058 43.478 0.00 0.00 0.00 3.60
772 781 2.488153 GGCTCACTATTTGCTTTCCGTT 59.512 45.455 0.00 0.00 0.00 4.44
773 782 2.084546 GGCTCACTATTTGCTTTCCGT 58.915 47.619 0.00 0.00 0.00 4.69
774 783 1.062587 CGGCTCACTATTTGCTTTCCG 59.937 52.381 0.00 0.00 0.00 4.30
775 784 2.084546 ACGGCTCACTATTTGCTTTCC 58.915 47.619 0.00 0.00 0.00 3.13
776 785 4.570772 TCATACGGCTCACTATTTGCTTTC 59.429 41.667 0.00 0.00 0.00 2.62
777 786 4.513442 TCATACGGCTCACTATTTGCTTT 58.487 39.130 0.00 0.00 0.00 3.51
778 787 4.137116 TCATACGGCTCACTATTTGCTT 57.863 40.909 0.00 0.00 0.00 3.91
779 788 3.819564 TCATACGGCTCACTATTTGCT 57.180 42.857 0.00 0.00 0.00 3.91
780 789 3.303395 GCTTCATACGGCTCACTATTTGC 60.303 47.826 0.00 0.00 0.00 3.68
781 790 3.871006 TGCTTCATACGGCTCACTATTTG 59.129 43.478 0.00 0.00 0.00 2.32
782 791 4.137116 TGCTTCATACGGCTCACTATTT 57.863 40.909 0.00 0.00 0.00 1.40
783 792 3.819564 TGCTTCATACGGCTCACTATT 57.180 42.857 0.00 0.00 0.00 1.73
784 793 3.555795 CCATGCTTCATACGGCTCACTAT 60.556 47.826 0.00 0.00 0.00 2.12
785 794 2.224042 CCATGCTTCATACGGCTCACTA 60.224 50.000 0.00 0.00 0.00 2.74
786 795 1.473965 CCATGCTTCATACGGCTCACT 60.474 52.381 0.00 0.00 0.00 3.41
787 796 0.940126 CCATGCTTCATACGGCTCAC 59.060 55.000 0.00 0.00 0.00 3.51
788 797 0.179048 CCCATGCTTCATACGGCTCA 60.179 55.000 0.00 0.00 0.00 4.26
789 798 0.179045 ACCCATGCTTCATACGGCTC 60.179 55.000 0.00 0.00 0.00 4.70
790 799 1.128200 TACCCATGCTTCATACGGCT 58.872 50.000 0.00 0.00 0.00 5.52
791 800 1.873591 CTTACCCATGCTTCATACGGC 59.126 52.381 0.00 0.00 0.00 5.68
792 801 2.104111 TCCTTACCCATGCTTCATACGG 59.896 50.000 0.00 0.00 0.00 4.02
793 802 3.469008 TCCTTACCCATGCTTCATACG 57.531 47.619 0.00 0.00 0.00 3.06
794 803 4.781934 AGTTCCTTACCCATGCTTCATAC 58.218 43.478 0.00 0.00 0.00 2.39
795 804 5.045213 TGAAGTTCCTTACCCATGCTTCATA 60.045 40.000 0.00 0.00 36.82 2.15
796 805 4.263905 TGAAGTTCCTTACCCATGCTTCAT 60.264 41.667 0.00 0.00 36.82 2.57
797 806 3.073798 TGAAGTTCCTTACCCATGCTTCA 59.926 43.478 0.00 0.00 38.60 3.02
798 807 3.440522 GTGAAGTTCCTTACCCATGCTTC 59.559 47.826 0.00 0.00 33.57 3.86
799 808 3.181434 TGTGAAGTTCCTTACCCATGCTT 60.181 43.478 0.00 0.00 0.00 3.91
800 809 2.375174 TGTGAAGTTCCTTACCCATGCT 59.625 45.455 0.00 0.00 0.00 3.79
801 810 2.790433 TGTGAAGTTCCTTACCCATGC 58.210 47.619 0.00 0.00 0.00 4.06
802 811 5.534654 TCTTTTGTGAAGTTCCTTACCCATG 59.465 40.000 0.00 0.00 0.00 3.66
803 812 5.701224 TCTTTTGTGAAGTTCCTTACCCAT 58.299 37.500 0.00 0.00 0.00 4.00
804 813 5.118729 TCTTTTGTGAAGTTCCTTACCCA 57.881 39.130 0.00 0.00 0.00 4.51
805 814 5.507482 GCTTCTTTTGTGAAGTTCCTTACCC 60.507 44.000 0.00 0.00 43.74 3.69
806 815 5.299531 AGCTTCTTTTGTGAAGTTCCTTACC 59.700 40.000 0.00 0.00 43.74 2.85
807 816 6.378710 AGCTTCTTTTGTGAAGTTCCTTAC 57.621 37.500 0.00 0.00 43.74 2.34
808 817 6.204882 GCTAGCTTCTTTTGTGAAGTTCCTTA 59.795 38.462 7.70 0.00 43.74 2.69
809 818 5.009110 GCTAGCTTCTTTTGTGAAGTTCCTT 59.991 40.000 7.70 0.00 43.74 3.36
810 819 4.517075 GCTAGCTTCTTTTGTGAAGTTCCT 59.483 41.667 7.70 0.00 43.74 3.36
811 820 4.517075 AGCTAGCTTCTTTTGTGAAGTTCC 59.483 41.667 12.68 0.00 43.74 3.62
812 821 5.237344 TCAGCTAGCTTCTTTTGTGAAGTTC 59.763 40.000 16.46 0.00 43.74 3.01
813 822 5.008118 GTCAGCTAGCTTCTTTTGTGAAGTT 59.992 40.000 16.46 3.13 43.74 2.66
814 823 4.513318 GTCAGCTAGCTTCTTTTGTGAAGT 59.487 41.667 16.46 0.00 43.74 3.01
815 824 4.754114 AGTCAGCTAGCTTCTTTTGTGAAG 59.246 41.667 16.46 0.00 44.44 3.02
816 825 4.512944 CAGTCAGCTAGCTTCTTTTGTGAA 59.487 41.667 16.46 0.00 0.00 3.18
817 826 4.060900 CAGTCAGCTAGCTTCTTTTGTGA 58.939 43.478 16.46 4.57 0.00 3.58
818 827 3.364764 GCAGTCAGCTAGCTTCTTTTGTG 60.365 47.826 16.46 7.02 41.15 3.33
819 828 2.810852 GCAGTCAGCTAGCTTCTTTTGT 59.189 45.455 16.46 0.00 41.15 2.83
820 829 2.810274 TGCAGTCAGCTAGCTTCTTTTG 59.190 45.455 16.46 10.42 45.94 2.44
821 830 3.072944 CTGCAGTCAGCTAGCTTCTTTT 58.927 45.455 16.46 0.00 45.94 2.27
822 831 2.301296 TCTGCAGTCAGCTAGCTTCTTT 59.699 45.455 16.46 0.00 45.94 2.52
823 832 1.898472 TCTGCAGTCAGCTAGCTTCTT 59.102 47.619 16.46 0.00 45.94 2.52
824 833 1.554836 TCTGCAGTCAGCTAGCTTCT 58.445 50.000 16.46 13.70 45.94 2.85
825 834 2.376808 TTCTGCAGTCAGCTAGCTTC 57.623 50.000 16.46 11.47 45.94 3.86
826 835 2.847327 TTTCTGCAGTCAGCTAGCTT 57.153 45.000 16.46 0.00 45.94 3.74
827 836 2.235650 TGATTTCTGCAGTCAGCTAGCT 59.764 45.455 12.68 12.68 45.94 3.32
828 837 2.625737 TGATTTCTGCAGTCAGCTAGC 58.374 47.619 14.67 6.62 45.94 3.42
829 838 3.373439 GGTTGATTTCTGCAGTCAGCTAG 59.627 47.826 14.67 0.00 45.94 3.42
830 839 3.008375 AGGTTGATTTCTGCAGTCAGCTA 59.992 43.478 14.67 0.00 45.94 3.32
831 840 2.157738 GGTTGATTTCTGCAGTCAGCT 58.842 47.619 14.67 0.00 45.94 4.24
832 841 2.157738 AGGTTGATTTCTGCAGTCAGC 58.842 47.619 14.67 11.95 45.96 4.26
833 842 4.843220 AAAGGTTGATTTCTGCAGTCAG 57.157 40.909 14.67 0.00 41.67 3.51
834 843 4.889409 AGAAAAGGTTGATTTCTGCAGTCA 59.111 37.500 14.67 7.56 43.56 3.41
835 844 5.444663 AGAAAAGGTTGATTTCTGCAGTC 57.555 39.130 14.67 4.61 43.56 3.51
836 845 5.859205 AAGAAAAGGTTGATTTCTGCAGT 57.141 34.783 14.67 0.00 44.22 4.40
837 846 6.201615 GGAAAAGAAAAGGTTGATTTCTGCAG 59.798 38.462 7.63 7.63 44.22 4.41
838 847 6.048509 GGAAAAGAAAAGGTTGATTTCTGCA 58.951 36.000 2.59 0.00 44.22 4.41
839 848 5.175673 CGGAAAAGAAAAGGTTGATTTCTGC 59.824 40.000 2.59 0.00 44.22 4.26
840 849 6.198966 CACGGAAAAGAAAAGGTTGATTTCTG 59.801 38.462 2.59 0.00 44.22 3.02
841 850 6.273071 CACGGAAAAGAAAAGGTTGATTTCT 58.727 36.000 0.00 0.00 46.30 2.52
842 851 5.051039 GCACGGAAAAGAAAAGGTTGATTTC 60.051 40.000 0.00 0.00 37.11 2.17
843 852 4.808895 GCACGGAAAAGAAAAGGTTGATTT 59.191 37.500 0.00 0.00 0.00 2.17
844 853 4.368315 GCACGGAAAAGAAAAGGTTGATT 58.632 39.130 0.00 0.00 0.00 2.57
845 854 3.243737 GGCACGGAAAAGAAAAGGTTGAT 60.244 43.478 0.00 0.00 0.00 2.57
846 855 2.100087 GGCACGGAAAAGAAAAGGTTGA 59.900 45.455 0.00 0.00 0.00 3.18
847 856 2.469826 GGCACGGAAAAGAAAAGGTTG 58.530 47.619 0.00 0.00 0.00 3.77
848 857 2.882927 GGCACGGAAAAGAAAAGGTT 57.117 45.000 0.00 0.00 0.00 3.50
893 902 8.314751 CCCCTTAACACGATCATCTTTATAGAT 58.685 37.037 0.00 0.00 41.89 1.98
894 903 7.507956 TCCCCTTAACACGATCATCTTTATAGA 59.492 37.037 0.00 0.00 34.21 1.98
895 904 7.667557 TCCCCTTAACACGATCATCTTTATAG 58.332 38.462 0.00 0.00 0.00 1.31
896 905 7.606135 TCCCCTTAACACGATCATCTTTATA 57.394 36.000 0.00 0.00 0.00 0.98
897 906 6.494666 TCCCCTTAACACGATCATCTTTAT 57.505 37.500 0.00 0.00 0.00 1.40
898 907 5.943349 TCCCCTTAACACGATCATCTTTA 57.057 39.130 0.00 0.00 0.00 1.85
899 908 4.837093 TCCCCTTAACACGATCATCTTT 57.163 40.909 0.00 0.00 0.00 2.52
900 909 4.837093 TTCCCCTTAACACGATCATCTT 57.163 40.909 0.00 0.00 0.00 2.40
901 910 6.688073 ATATTCCCCTTAACACGATCATCT 57.312 37.500 0.00 0.00 0.00 2.90
902 911 6.710744 ACAATATTCCCCTTAACACGATCATC 59.289 38.462 0.00 0.00 0.00 2.92
903 912 6.601332 ACAATATTCCCCTTAACACGATCAT 58.399 36.000 0.00 0.00 0.00 2.45
904 913 5.996644 ACAATATTCCCCTTAACACGATCA 58.003 37.500 0.00 0.00 0.00 2.92
905 914 6.053005 TGACAATATTCCCCTTAACACGATC 58.947 40.000 0.00 0.00 0.00 3.69
906 915 5.996644 TGACAATATTCCCCTTAACACGAT 58.003 37.500 0.00 0.00 0.00 3.73
907 916 5.423704 TGACAATATTCCCCTTAACACGA 57.576 39.130 0.00 0.00 0.00 4.35
908 917 5.820423 TGATGACAATATTCCCCTTAACACG 59.180 40.000 0.00 0.00 0.00 4.49
909 918 7.823745 ATGATGACAATATTCCCCTTAACAC 57.176 36.000 0.00 0.00 0.00 3.32
910 919 7.287466 CCAATGATGACAATATTCCCCTTAACA 59.713 37.037 0.00 0.00 0.00 2.41
911 920 7.505585 TCCAATGATGACAATATTCCCCTTAAC 59.494 37.037 0.00 0.00 0.00 2.01
912 921 7.505585 GTCCAATGATGACAATATTCCCCTTAA 59.494 37.037 0.00 0.00 32.91 1.85
913 922 7.004086 GTCCAATGATGACAATATTCCCCTTA 58.996 38.462 0.00 0.00 32.91 2.69
914 923 5.835280 GTCCAATGATGACAATATTCCCCTT 59.165 40.000 0.00 0.00 32.91 3.95
915 924 5.135020 AGTCCAATGATGACAATATTCCCCT 59.865 40.000 0.00 0.00 35.15 4.79
916 925 5.388654 AGTCCAATGATGACAATATTCCCC 58.611 41.667 0.00 0.00 35.15 4.81
917 926 6.015940 GGAAGTCCAATGATGACAATATTCCC 60.016 42.308 0.00 0.00 35.15 3.97
918 927 6.774656 AGGAAGTCCAATGATGACAATATTCC 59.225 38.462 0.00 0.00 38.89 3.01
919 928 7.814264 AGGAAGTCCAATGATGACAATATTC 57.186 36.000 0.00 0.00 38.89 1.75
920 929 9.125026 GTTAGGAAGTCCAATGATGACAATATT 57.875 33.333 0.00 0.00 38.89 1.28
921 930 7.442364 CGTTAGGAAGTCCAATGATGACAATAT 59.558 37.037 0.00 0.00 38.89 1.28
922 931 6.761242 CGTTAGGAAGTCCAATGATGACAATA 59.239 38.462 0.00 0.00 38.89 1.90
923 932 5.586243 CGTTAGGAAGTCCAATGATGACAAT 59.414 40.000 0.00 0.00 38.89 2.71
924 933 4.935205 CGTTAGGAAGTCCAATGATGACAA 59.065 41.667 0.00 0.00 38.89 3.18
925 934 4.020573 ACGTTAGGAAGTCCAATGATGACA 60.021 41.667 0.00 0.00 38.89 3.58
926 935 4.504858 ACGTTAGGAAGTCCAATGATGAC 58.495 43.478 0.00 0.00 38.89 3.06
927 936 4.819105 ACGTTAGGAAGTCCAATGATGA 57.181 40.909 0.00 0.00 38.89 2.92
928 937 5.006746 GCTAACGTTAGGAAGTCCAATGATG 59.993 44.000 30.94 6.58 38.89 3.07
929 938 5.116882 GCTAACGTTAGGAAGTCCAATGAT 58.883 41.667 30.94 0.00 38.89 2.45
930 939 4.020928 TGCTAACGTTAGGAAGTCCAATGA 60.021 41.667 30.94 0.00 38.89 2.57
931 940 4.250464 TGCTAACGTTAGGAAGTCCAATG 58.750 43.478 30.94 7.75 38.89 2.82
932 941 4.546829 TGCTAACGTTAGGAAGTCCAAT 57.453 40.909 30.94 0.00 38.89 3.16
933 942 4.546829 ATGCTAACGTTAGGAAGTCCAA 57.453 40.909 29.53 7.88 38.89 3.53
934 943 5.664294 TTATGCTAACGTTAGGAAGTCCA 57.336 39.130 29.53 19.98 38.89 4.02
935 944 6.973229 TTTTATGCTAACGTTAGGAAGTCC 57.027 37.500 29.53 15.51 34.72 3.85
958 967 8.711457 GCATGAGTTTTGTTAGTTGCATATTTT 58.289 29.630 0.00 0.00 0.00 1.82
959 968 7.062138 CGCATGAGTTTTGTTAGTTGCATATTT 59.938 33.333 0.00 0.00 0.00 1.40
960 969 6.527722 CGCATGAGTTTTGTTAGTTGCATATT 59.472 34.615 0.00 0.00 0.00 1.28
961 970 6.029607 CGCATGAGTTTTGTTAGTTGCATAT 58.970 36.000 0.00 0.00 0.00 1.78
962 971 5.389778 CGCATGAGTTTTGTTAGTTGCATA 58.610 37.500 0.00 0.00 0.00 3.14
963 972 4.229096 CGCATGAGTTTTGTTAGTTGCAT 58.771 39.130 0.00 0.00 0.00 3.96
964 973 3.549827 CCGCATGAGTTTTGTTAGTTGCA 60.550 43.478 0.00 0.00 0.00 4.08
965 974 2.979813 CCGCATGAGTTTTGTTAGTTGC 59.020 45.455 0.00 0.00 0.00 4.17
966 975 3.974401 CACCGCATGAGTTTTGTTAGTTG 59.026 43.478 0.00 0.00 0.00 3.16
967 976 3.630312 ACACCGCATGAGTTTTGTTAGTT 59.370 39.130 0.00 0.00 0.00 2.24
968 977 3.211045 ACACCGCATGAGTTTTGTTAGT 58.789 40.909 0.00 0.00 0.00 2.24
969 978 3.896648 ACACCGCATGAGTTTTGTTAG 57.103 42.857 0.00 0.00 0.00 2.34
970 979 4.024725 GTGTACACCGCATGAGTTTTGTTA 60.025 41.667 15.42 0.00 0.00 2.41
971 980 2.946329 TGTACACCGCATGAGTTTTGTT 59.054 40.909 0.00 0.00 0.00 2.83
972 981 2.289547 GTGTACACCGCATGAGTTTTGT 59.710 45.455 15.42 0.00 0.00 2.83
973 982 2.289274 TGTGTACACCGCATGAGTTTTG 59.711 45.455 22.91 0.00 0.00 2.44
974 983 2.566913 TGTGTACACCGCATGAGTTTT 58.433 42.857 22.91 0.00 0.00 2.43
975 984 2.248280 TGTGTACACCGCATGAGTTT 57.752 45.000 22.91 0.00 0.00 2.66
976 985 2.248280 TTGTGTACACCGCATGAGTT 57.752 45.000 22.91 0.00 32.58 3.01
977 986 2.248280 TTTGTGTACACCGCATGAGT 57.752 45.000 22.91 0.00 32.58 3.41
978 987 3.617540 TTTTTGTGTACACCGCATGAG 57.382 42.857 22.91 0.00 32.58 2.90
979 988 5.635866 CATATTTTTGTGTACACCGCATGA 58.364 37.500 22.91 5.45 32.58 3.07
980 989 4.265085 GCATATTTTTGTGTACACCGCATG 59.735 41.667 22.91 16.36 32.58 4.06
981 990 4.082517 TGCATATTTTTGTGTACACCGCAT 60.083 37.500 22.91 11.86 32.58 4.73
982 991 3.253432 TGCATATTTTTGTGTACACCGCA 59.747 39.130 22.91 14.28 0.00 5.69
983 992 3.827625 TGCATATTTTTGTGTACACCGC 58.172 40.909 22.91 12.17 0.00 5.68
984 993 5.457140 AGTTGCATATTTTTGTGTACACCG 58.543 37.500 22.91 3.06 0.00 4.94
985 994 7.863375 TGTTAGTTGCATATTTTTGTGTACACC 59.137 33.333 22.91 6.06 0.00 4.16
986 995 8.789881 TGTTAGTTGCATATTTTTGTGTACAC 57.210 30.769 19.36 19.36 0.00 2.90
987 996 9.803315 TTTGTTAGTTGCATATTTTTGTGTACA 57.197 25.926 0.00 0.00 0.00 2.90
996 1005 9.676195 GGCAAAAATTTTGTTAGTTGCATATTT 57.324 25.926 18.28 0.00 42.38 1.40
997 1006 8.296000 GGGCAAAAATTTTGTTAGTTGCATATT 58.704 29.630 18.28 0.00 42.38 1.28
998 1007 7.360776 CGGGCAAAAATTTTGTTAGTTGCATAT 60.361 33.333 18.28 0.00 42.38 1.78
999 1008 6.073548 CGGGCAAAAATTTTGTTAGTTGCATA 60.074 34.615 18.28 0.00 42.38 3.14
1000 1009 5.277731 CGGGCAAAAATTTTGTTAGTTGCAT 60.278 36.000 18.28 0.00 42.38 3.96
1001 1010 4.034510 CGGGCAAAAATTTTGTTAGTTGCA 59.965 37.500 18.28 0.00 42.38 4.08
1002 1011 4.271291 TCGGGCAAAAATTTTGTTAGTTGC 59.729 37.500 18.28 12.50 40.42 4.17
1003 1012 5.050431 CCTCGGGCAAAAATTTTGTTAGTTG 60.050 40.000 18.28 0.00 0.00 3.16
1004 1013 5.053811 CCTCGGGCAAAAATTTTGTTAGTT 58.946 37.500 18.28 0.00 0.00 2.24
1005 1014 4.502431 CCCTCGGGCAAAAATTTTGTTAGT 60.502 41.667 18.28 0.00 0.00 2.24
1006 1015 3.993736 CCCTCGGGCAAAAATTTTGTTAG 59.006 43.478 18.28 10.43 0.00 2.34
1007 1016 3.641906 TCCCTCGGGCAAAAATTTTGTTA 59.358 39.130 18.28 3.05 34.68 2.41
1008 1017 2.436173 TCCCTCGGGCAAAAATTTTGTT 59.564 40.909 18.28 0.00 34.68 2.83
1009 1018 2.043227 TCCCTCGGGCAAAAATTTTGT 58.957 42.857 18.28 0.00 34.68 2.83
1010 1019 2.829741 TCCCTCGGGCAAAAATTTTG 57.170 45.000 13.64 13.64 34.68 2.44
1011 1020 3.616317 CGAATCCCTCGGGCAAAAATTTT 60.616 43.478 0.00 0.00 44.20 1.82
1012 1021 2.094234 CGAATCCCTCGGGCAAAAATTT 60.094 45.455 0.00 0.00 44.20 1.82
1013 1022 1.476488 CGAATCCCTCGGGCAAAAATT 59.524 47.619 0.00 0.00 44.20 1.82
1014 1023 1.102978 CGAATCCCTCGGGCAAAAAT 58.897 50.000 0.00 0.00 44.20 1.82
1015 1024 2.562125 CGAATCCCTCGGGCAAAAA 58.438 52.632 0.00 0.00 44.20 1.94
1041 1050 1.068585 GGAAATACGATCGGGCGGT 59.931 57.895 20.98 0.00 35.12 5.68
1087 1096 3.924686 GGACGATAACTCTGAAAAGCGAA 59.075 43.478 0.00 0.00 0.00 4.70
1089 1098 2.603560 GGGACGATAACTCTGAAAAGCG 59.396 50.000 0.00 0.00 0.00 4.68
1141 1150 9.689501 AATTTCACTATATTTCTTACCGGGAAA 57.310 29.630 6.32 6.62 37.15 3.13
1999 2481 6.239148 GCAAAAGAAAAAGAGGTCCAAGAGAT 60.239 38.462 0.00 0.00 0.00 2.75
2356 2887 7.884354 ACCCGTGGAATTTTTACTCTTATAACA 59.116 33.333 0.00 0.00 0.00 2.41
2509 3044 5.012251 TGCTGTGATTGGTTTAGTAGGTGTA 59.988 40.000 0.00 0.00 0.00 2.90
2576 3111 1.569072 AGGGGAAATGGCCGATACTTT 59.431 47.619 0.00 0.00 0.00 2.66
2577 3112 1.222567 AGGGGAAATGGCCGATACTT 58.777 50.000 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.