Multiple sequence alignment - TraesCS5A01G520900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5A01G520900 chr5A 100.000 4951 0 0 631 5581 681462664 681467614 0.000000e+00 9143.0
1 TraesCS5A01G520900 chr5A 94.702 151 6 2 5426 5575 681485450 681485301 3.360000e-57 233.0
2 TraesCS5A01G520900 chr5A 92.025 163 11 2 631 793 414976485 414976325 1.560000e-55 228.0
3 TraesCS5A01G520900 chr5A 100.000 89 0 0 1 89 681462034 681462122 1.240000e-36 165.0
4 TraesCS5A01G520900 chr4D 92.055 4745 211 74 793 5437 500497708 500502386 0.000000e+00 6521.0
5 TraesCS5A01G520900 chr4B 91.139 4740 242 88 793 5437 644375933 644371277 0.000000e+00 6263.0
6 TraesCS5A01G520900 chr4B 100.000 62 0 0 28 89 660113752 660113691 1.270000e-21 115.0
7 TraesCS5A01G520900 chr4B 100.000 62 0 0 28 89 665559399 665559460 1.270000e-21 115.0
8 TraesCS5A01G520900 chr7A 94.479 163 8 1 633 794 731648479 731648317 3.340000e-62 250.0
9 TraesCS5A01G520900 chr3A 92.727 165 10 2 631 794 76343677 76343840 2.600000e-58 237.0
10 TraesCS5A01G520900 chr3A 92.121 165 11 2 631 793 16861101 16860937 1.210000e-56 231.0
11 TraesCS5A01G520900 chr7D 93.631 157 9 1 5426 5581 602087426 602087270 3.360000e-57 233.0
12 TraesCS5A01G520900 chr7D 93.103 145 9 1 5438 5581 113727582 113727726 1.580000e-50 211.0
13 TraesCS5A01G520900 chr7D 89.873 158 15 1 5425 5581 360143059 360142902 9.480000e-48 202.0
14 TraesCS5A01G520900 chr6A 92.638 163 10 2 631 793 471195327 471195167 3.360000e-57 233.0
15 TraesCS5A01G520900 chr6A 92.121 165 11 2 631 793 76435845 76435681 1.210000e-56 231.0
16 TraesCS5A01G520900 chr6A 81.633 147 26 1 4026 4171 39172093 39171947 2.730000e-23 121.0
17 TraesCS5A01G520900 chr6A 100.000 62 0 0 28 89 58001655 58001716 1.270000e-21 115.0
18 TraesCS5A01G520900 chr2A 92.121 165 12 1 631 794 35678458 35678294 1.210000e-56 231.0
19 TraesCS5A01G520900 chr2A 91.515 165 12 2 631 793 20238929 20239093 5.630000e-55 226.0
20 TraesCS5A01G520900 chr2A 100.000 62 0 0 28 89 423177341 423177280 1.270000e-21 115.0
21 TraesCS5A01G520900 chr5D 92.994 157 10 1 5426 5581 502144491 502144647 1.560000e-55 228.0
22 TraesCS5A01G520900 chr5D 92.949 156 10 1 5427 5581 502148734 502148579 5.630000e-55 226.0
23 TraesCS5A01G520900 chr5D 73.507 268 52 14 4277 4535 543596917 543596660 3.580000e-12 84.2
24 TraesCS5A01G520900 chr1A 92.025 163 12 1 631 793 454420310 454420471 1.560000e-55 228.0
25 TraesCS5A01G520900 chr2D 92.949 156 10 1 5427 5581 64626213 64626058 5.630000e-55 226.0
26 TraesCS5A01G520900 chr2D 91.667 156 12 1 5427 5581 64621971 64622126 1.220000e-51 215.0
27 TraesCS5A01G520900 chr7B 92.667 150 10 1 5433 5581 43963429 43963280 1.220000e-51 215.0
28 TraesCS5A01G520900 chr4A 89.677 155 16 0 4018 4172 625534043 625534197 1.230000e-46 198.0
29 TraesCS5A01G520900 chr4A 100.000 62 0 0 28 89 199942226 199942165 1.270000e-21 115.0
30 TraesCS5A01G520900 chr4A 74.621 264 54 7 4279 4535 625534223 625534480 2.750000e-18 104.0
31 TraesCS5A01G520900 chr5B 89.032 155 17 0 4018 4172 685436232 685436386 5.710000e-45 193.0
32 TraesCS5A01G520900 chr5B 98.529 68 0 1 22 89 440262452 440262518 9.820000e-23 119.0
33 TraesCS5A01G520900 chr5B 98.529 68 0 1 22 89 440262727 440262793 9.820000e-23 119.0
34 TraesCS5A01G520900 chr5B 74.453 274 51 14 4277 4535 685436508 685436777 3.560000e-17 100.0
35 TraesCS5A01G520900 chr6D 81.818 143 26 0 4029 4171 34985569 34985427 2.730000e-23 121.0
36 TraesCS5A01G520900 chr6B 100.000 62 0 0 28 89 171973432 171973371 1.270000e-21 115.0
37 TraesCS5A01G520900 chr2B 93.421 76 3 2 16 89 632039483 632039558 1.640000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5A01G520900 chr5A 681462034 681467614 5580 False 4654 9143 100.000 1 5581 2 chr5A.!!$F1 5580
1 TraesCS5A01G520900 chr4D 500497708 500502386 4678 False 6521 6521 92.055 793 5437 1 chr4D.!!$F1 4644
2 TraesCS5A01G520900 chr4B 644371277 644375933 4656 True 6263 6263 91.139 793 5437 1 chr4B.!!$R1 4644

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
715 716 0.029371 AAGTAGGGGGTGGGGGATAC 60.029 60.0 0.00 0.00 0.00 2.24 F
717 718 0.029371 GTAGGGGGTGGGGGATACTT 60.029 60.0 0.00 0.00 0.00 2.24 F
820 821 0.030603 GGGGGAGAAGGAGAGACCAT 60.031 60.0 0.00 0.00 42.04 3.55 F
830 838 0.464013 GAGAGACCATGCTGCATGCT 60.464 55.0 31.84 24.91 40.20 3.79 F
2112 2158 0.528017 GCACACGAGATGAGGAGACA 59.472 55.0 0.00 0.00 0.00 3.41 F
3387 3445 0.173029 TGCCAGCAACAAATATGCCG 59.827 50.0 0.00 0.00 44.91 5.69 F
3842 3942 0.033366 AAGCGGTGGAAAATGCCAAC 59.967 50.0 0.00 0.00 42.35 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1881 1909 1.092345 GGATGCCAAGGACGCTTCTC 61.092 60.000 0.00 0.0 32.53 2.87 R
1884 1912 1.377725 CTGGATGCCAAGGACGCTT 60.378 57.895 0.00 0.0 30.80 4.68 R
2763 2814 0.855349 CATCGTCGTCAATAGCTGCC 59.145 55.000 0.00 0.0 0.00 4.85 R
2805 2856 3.127791 ACCTGAACATCCCATCTCTCT 57.872 47.619 0.00 0.0 0.00 3.10 R
3682 3774 0.177836 TGGCCAGGACGACACATATG 59.822 55.000 0.00 0.0 0.00 1.78 R
4289 4412 0.672342 GCGACATCCTGTACCCGTAT 59.328 55.000 0.00 0.0 0.00 3.06 R
5507 5652 0.033011 AGTCCCTAGGCTCGTGTGAT 60.033 55.000 2.05 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.396590 TTTTAGGGGAAGCAGCTACG 57.603 50.000 0.00 0.00 0.00 3.51
22 23 1.563924 TTTAGGGGAAGCAGCTACGA 58.436 50.000 0.00 0.00 0.00 3.43
23 24 1.789523 TTAGGGGAAGCAGCTACGAT 58.210 50.000 0.00 0.00 0.00 3.73
24 25 1.329256 TAGGGGAAGCAGCTACGATC 58.671 55.000 0.00 0.00 0.00 3.69
25 26 1.069935 GGGGAAGCAGCTACGATCC 59.930 63.158 0.00 0.00 0.00 3.36
26 27 1.300233 GGGAAGCAGCTACGATCCG 60.300 63.158 0.00 0.00 0.00 4.18
27 28 1.951631 GGAAGCAGCTACGATCCGC 60.952 63.158 0.00 0.00 0.00 5.54
29 30 3.774959 AAGCAGCTACGATCCGCGG 62.775 63.158 22.12 22.12 46.49 6.46
30 31 4.266070 GCAGCTACGATCCGCGGA 62.266 66.667 33.12 33.12 46.49 5.54
31 32 2.411701 CAGCTACGATCCGCGGAA 59.588 61.111 34.66 15.30 46.49 4.30
32 33 1.226859 CAGCTACGATCCGCGGAAA 60.227 57.895 34.66 16.79 46.49 3.13
33 34 0.804544 CAGCTACGATCCGCGGAAAA 60.805 55.000 34.66 16.42 46.49 2.29
34 35 0.108520 AGCTACGATCCGCGGAAAAA 60.109 50.000 34.66 16.79 46.49 1.94
67 68 6.678568 AGACCAGGTCTCATATAAATCAGG 57.321 41.667 17.31 0.00 38.71 3.86
68 69 6.146760 AGACCAGGTCTCATATAAATCAGGT 58.853 40.000 17.31 0.00 38.71 4.00
69 70 6.042552 AGACCAGGTCTCATATAAATCAGGTG 59.957 42.308 17.31 0.00 38.71 4.00
70 71 5.905331 ACCAGGTCTCATATAAATCAGGTGA 59.095 40.000 0.00 0.00 0.00 4.02
71 72 6.042552 ACCAGGTCTCATATAAATCAGGTGAG 59.957 42.308 0.00 0.00 38.07 3.51
72 73 6.268617 CCAGGTCTCATATAAATCAGGTGAGA 59.731 42.308 0.00 0.00 41.99 3.27
75 76 6.672266 TCTCATATAAATCAGGTGAGACCC 57.328 41.667 0.00 0.00 40.06 4.46
76 77 5.243954 TCTCATATAAATCAGGTGAGACCCG 59.756 44.000 0.00 0.00 40.06 5.28
77 78 2.622064 ATAAATCAGGTGAGACCCGC 57.378 50.000 0.00 0.00 39.75 6.13
78 79 0.539986 TAAATCAGGTGAGACCCGCC 59.460 55.000 0.00 0.00 45.81 6.13
79 80 2.198304 AAATCAGGTGAGACCCGCCC 62.198 60.000 0.00 0.00 46.65 6.13
80 81 3.625632 ATCAGGTGAGACCCGCCCT 62.626 63.158 0.00 0.00 46.65 5.19
81 82 4.087892 CAGGTGAGACCCGCCCTG 62.088 72.222 0.00 0.00 46.65 4.45
82 83 4.316823 AGGTGAGACCCGCCCTGA 62.317 66.667 0.00 0.00 46.65 3.86
83 84 3.083997 GGTGAGACCCGCCCTGAT 61.084 66.667 0.00 0.00 39.55 2.90
84 85 2.187946 GTGAGACCCGCCCTGATG 59.812 66.667 0.00 0.00 0.00 3.07
85 86 2.038813 TGAGACCCGCCCTGATGA 59.961 61.111 0.00 0.00 0.00 2.92
86 87 1.612146 TGAGACCCGCCCTGATGAA 60.612 57.895 0.00 0.00 0.00 2.57
87 88 0.982852 TGAGACCCGCCCTGATGAAT 60.983 55.000 0.00 0.00 0.00 2.57
88 89 0.533755 GAGACCCGCCCTGATGAATG 60.534 60.000 0.00 0.00 0.00 2.67
649 650 1.996292 CGTCCTGATGAATGACACGT 58.004 50.000 0.00 0.00 0.00 4.49
650 651 1.655597 CGTCCTGATGAATGACACGTG 59.344 52.381 15.48 15.48 0.00 4.49
651 652 2.002586 GTCCTGATGAATGACACGTGG 58.997 52.381 21.57 1.66 0.00 4.94
652 653 0.729116 CCTGATGAATGACACGTGGC 59.271 55.000 21.57 19.24 0.00 5.01
653 654 1.441738 CTGATGAATGACACGTGGCA 58.558 50.000 29.28 29.28 37.54 4.92
659 660 3.320823 ATGACACGTGGCATTCACA 57.679 47.368 31.22 4.96 42.08 3.58
660 661 1.603456 ATGACACGTGGCATTCACAA 58.397 45.000 31.22 4.08 42.08 3.33
661 662 1.383523 TGACACGTGGCATTCACAAA 58.616 45.000 23.03 0.00 46.36 2.83
662 663 1.952990 TGACACGTGGCATTCACAAAT 59.047 42.857 23.03 0.00 46.36 2.32
663 664 2.031245 TGACACGTGGCATTCACAAATC 60.031 45.455 23.03 3.54 46.36 2.17
664 665 1.952990 ACACGTGGCATTCACAAATCA 59.047 42.857 21.57 0.00 46.36 2.57
665 666 2.287547 ACACGTGGCATTCACAAATCAC 60.288 45.455 21.57 0.00 46.36 3.06
666 667 1.952990 ACGTGGCATTCACAAATCACA 59.047 42.857 0.00 0.00 46.36 3.58
667 668 2.360483 ACGTGGCATTCACAAATCACAA 59.640 40.909 0.00 0.00 46.36 3.33
668 669 3.181482 ACGTGGCATTCACAAATCACAAA 60.181 39.130 0.00 0.00 46.36 2.83
669 670 3.426191 CGTGGCATTCACAAATCACAAAG 59.574 43.478 0.00 0.00 46.36 2.77
670 671 3.184986 GTGGCATTCACAAATCACAAAGC 59.815 43.478 0.00 0.00 45.39 3.51
671 672 3.181468 TGGCATTCACAAATCACAAAGCA 60.181 39.130 0.00 0.00 0.00 3.91
672 673 3.998341 GGCATTCACAAATCACAAAGCAT 59.002 39.130 0.00 0.00 0.00 3.79
673 674 4.092383 GGCATTCACAAATCACAAAGCATC 59.908 41.667 0.00 0.00 0.00 3.91
674 675 4.927425 GCATTCACAAATCACAAAGCATCT 59.073 37.500 0.00 0.00 0.00 2.90
675 676 6.094719 GCATTCACAAATCACAAAGCATCTA 58.905 36.000 0.00 0.00 0.00 1.98
676 677 6.587226 GCATTCACAAATCACAAAGCATCTAA 59.413 34.615 0.00 0.00 0.00 2.10
677 678 7.277098 GCATTCACAAATCACAAAGCATCTAAT 59.723 33.333 0.00 0.00 0.00 1.73
678 679 8.804743 CATTCACAAATCACAAAGCATCTAATC 58.195 33.333 0.00 0.00 0.00 1.75
679 680 7.692460 TCACAAATCACAAAGCATCTAATCT 57.308 32.000 0.00 0.00 0.00 2.40
680 681 7.755591 TCACAAATCACAAAGCATCTAATCTC 58.244 34.615 0.00 0.00 0.00 2.75
681 682 7.609146 TCACAAATCACAAAGCATCTAATCTCT 59.391 33.333 0.00 0.00 0.00 3.10
682 683 7.909121 CACAAATCACAAAGCATCTAATCTCTC 59.091 37.037 0.00 0.00 0.00 3.20
683 684 7.828223 ACAAATCACAAAGCATCTAATCTCTCT 59.172 33.333 0.00 0.00 0.00 3.10
684 685 8.336806 CAAATCACAAAGCATCTAATCTCTCTC 58.663 37.037 0.00 0.00 0.00 3.20
685 686 5.911752 TCACAAAGCATCTAATCTCTCTCC 58.088 41.667 0.00 0.00 0.00 3.71
686 687 5.055812 CACAAAGCATCTAATCTCTCTCCC 58.944 45.833 0.00 0.00 0.00 4.30
687 688 4.102367 ACAAAGCATCTAATCTCTCTCCCC 59.898 45.833 0.00 0.00 0.00 4.81
688 689 2.901291 AGCATCTAATCTCTCTCCCCC 58.099 52.381 0.00 0.00 0.00 5.40
689 690 2.454381 AGCATCTAATCTCTCTCCCCCT 59.546 50.000 0.00 0.00 0.00 4.79
690 691 2.566724 GCATCTAATCTCTCTCCCCCTG 59.433 54.545 0.00 0.00 0.00 4.45
691 692 3.756800 GCATCTAATCTCTCTCCCCCTGA 60.757 52.174 0.00 0.00 0.00 3.86
692 693 4.686891 CATCTAATCTCTCTCCCCCTGAT 58.313 47.826 0.00 0.00 0.00 2.90
693 694 4.841813 TCTAATCTCTCTCCCCCTGATT 57.158 45.455 0.00 0.00 0.00 2.57
694 695 5.163259 TCTAATCTCTCTCCCCCTGATTT 57.837 43.478 0.00 0.00 0.00 2.17
695 696 5.542743 TCTAATCTCTCTCCCCCTGATTTT 58.457 41.667 0.00 0.00 0.00 1.82
696 697 6.693599 TCTAATCTCTCTCCCCCTGATTTTA 58.306 40.000 0.00 0.00 0.00 1.52
697 698 7.139619 TCTAATCTCTCTCCCCCTGATTTTAA 58.860 38.462 0.00 0.00 0.00 1.52
698 699 5.903198 ATCTCTCTCCCCCTGATTTTAAG 57.097 43.478 0.00 0.00 0.00 1.85
699 700 4.699994 TCTCTCTCCCCCTGATTTTAAGT 58.300 43.478 0.00 0.00 0.00 2.24
700 701 5.850278 TCTCTCTCCCCCTGATTTTAAGTA 58.150 41.667 0.00 0.00 0.00 2.24
701 702 5.900123 TCTCTCTCCCCCTGATTTTAAGTAG 59.100 44.000 0.00 0.00 0.00 2.57
702 703 4.969359 TCTCTCCCCCTGATTTTAAGTAGG 59.031 45.833 0.00 0.00 0.00 3.18
707 708 3.898482 CCCTGATTTTAAGTAGGGGGTG 58.102 50.000 0.00 0.00 44.99 4.61
708 709 3.372675 CCCTGATTTTAAGTAGGGGGTGG 60.373 52.174 0.00 0.00 44.99 4.61
709 710 3.372675 CCTGATTTTAAGTAGGGGGTGGG 60.373 52.174 0.00 0.00 0.00 4.61
710 711 2.583566 TGATTTTAAGTAGGGGGTGGGG 59.416 50.000 0.00 0.00 0.00 4.96
711 712 1.385014 TTTTAAGTAGGGGGTGGGGG 58.615 55.000 0.00 0.00 0.00 5.40
712 713 0.501934 TTTAAGTAGGGGGTGGGGGA 59.498 55.000 0.00 0.00 0.00 4.81
713 714 0.732584 TTAAGTAGGGGGTGGGGGAT 59.267 55.000 0.00 0.00 0.00 3.85
714 715 1.647695 TAAGTAGGGGGTGGGGGATA 58.352 55.000 0.00 0.00 0.00 2.59
715 716 0.029371 AAGTAGGGGGTGGGGGATAC 60.029 60.000 0.00 0.00 0.00 2.24
716 717 0.939961 AGTAGGGGGTGGGGGATACT 60.940 60.000 0.00 0.00 0.00 2.12
717 718 0.029371 GTAGGGGGTGGGGGATACTT 60.029 60.000 0.00 0.00 0.00 2.24
718 719 0.732584 TAGGGGGTGGGGGATACTTT 59.267 55.000 0.00 0.00 0.00 2.66
719 720 0.924226 AGGGGGTGGGGGATACTTTG 60.924 60.000 0.00 0.00 0.00 2.77
720 721 1.219131 GGGGGTGGGGGATACTTTGT 61.219 60.000 0.00 0.00 0.00 2.83
721 722 0.033503 GGGGTGGGGGATACTTTGTG 60.034 60.000 0.00 0.00 0.00 3.33
722 723 0.996583 GGGTGGGGGATACTTTGTGA 59.003 55.000 0.00 0.00 0.00 3.58
723 724 1.569072 GGGTGGGGGATACTTTGTGAT 59.431 52.381 0.00 0.00 0.00 3.06
724 725 2.024369 GGGTGGGGGATACTTTGTGATT 60.024 50.000 0.00 0.00 0.00 2.57
725 726 3.565670 GGGTGGGGGATACTTTGTGATTT 60.566 47.826 0.00 0.00 0.00 2.17
726 727 3.447229 GGTGGGGGATACTTTGTGATTTG 59.553 47.826 0.00 0.00 0.00 2.32
727 728 4.086457 GTGGGGGATACTTTGTGATTTGT 58.914 43.478 0.00 0.00 0.00 2.83
728 729 4.082245 GTGGGGGATACTTTGTGATTTGTG 60.082 45.833 0.00 0.00 0.00 3.33
729 730 4.202620 TGGGGGATACTTTGTGATTTGTGA 60.203 41.667 0.00 0.00 0.00 3.58
730 731 4.770010 GGGGGATACTTTGTGATTTGTGAA 59.230 41.667 0.00 0.00 0.00 3.18
731 732 5.422012 GGGGGATACTTTGTGATTTGTGAAT 59.578 40.000 0.00 0.00 0.00 2.57
732 733 6.332630 GGGGATACTTTGTGATTTGTGAATG 58.667 40.000 0.00 0.00 0.00 2.67
733 734 5.807011 GGGATACTTTGTGATTTGTGAATGC 59.193 40.000 0.00 0.00 0.00 3.56
734 735 6.350445 GGGATACTTTGTGATTTGTGAATGCT 60.350 38.462 0.00 0.00 0.00 3.79
735 736 7.148086 GGGATACTTTGTGATTTGTGAATGCTA 60.148 37.037 0.00 0.00 0.00 3.49
736 737 7.698130 GGATACTTTGTGATTTGTGAATGCTAC 59.302 37.037 0.00 0.00 0.00 3.58
737 738 6.389830 ACTTTGTGATTTGTGAATGCTACA 57.610 33.333 0.00 0.00 0.00 2.74
738 739 6.985117 ACTTTGTGATTTGTGAATGCTACAT 58.015 32.000 0.00 0.00 0.00 2.29
739 740 6.864685 ACTTTGTGATTTGTGAATGCTACATG 59.135 34.615 0.00 0.00 0.00 3.21
740 741 5.963176 TGTGATTTGTGAATGCTACATGT 57.037 34.783 2.69 2.69 0.00 3.21
741 742 5.941733 TGTGATTTGTGAATGCTACATGTC 58.058 37.500 0.00 0.00 0.00 3.06
742 743 5.472820 TGTGATTTGTGAATGCTACATGTCA 59.527 36.000 0.00 0.00 0.00 3.58
743 744 6.151480 TGTGATTTGTGAATGCTACATGTCAT 59.849 34.615 0.00 0.00 30.17 3.06
744 745 7.031372 GTGATTTGTGAATGCTACATGTCATT 58.969 34.615 11.45 11.45 35.79 2.57
745 746 7.219535 GTGATTTGTGAATGCTACATGTCATTC 59.780 37.037 23.65 23.65 45.24 2.67
751 752 6.856135 GAATGCTACATGTCATTCATCAGA 57.144 37.500 24.71 0.00 44.71 3.27
752 753 7.255491 GAATGCTACATGTCATTCATCAGAA 57.745 36.000 24.71 3.80 44.71 3.02
753 754 7.818997 AATGCTACATGTCATTCATCAGAAT 57.181 32.000 0.00 0.00 45.16 2.40
763 764 2.428888 TCATCAGAATGGATCTCGCG 57.571 50.000 0.00 0.00 35.73 5.87
764 765 0.788995 CATCAGAATGGATCTCGCGC 59.211 55.000 0.00 0.00 35.73 6.86
765 766 0.390492 ATCAGAATGGATCTCGCGCA 59.610 50.000 8.75 0.00 35.73 6.09
766 767 0.175531 TCAGAATGGATCTCGCGCAA 59.824 50.000 8.75 0.00 35.73 4.85
767 768 0.580578 CAGAATGGATCTCGCGCAAG 59.419 55.000 8.75 0.00 35.73 4.01
768 769 0.461548 AGAATGGATCTCGCGCAAGA 59.538 50.000 8.75 3.49 32.99 3.02
769 770 0.579156 GAATGGATCTCGCGCAAGAC 59.421 55.000 8.75 0.00 43.02 3.01
770 771 0.811616 AATGGATCTCGCGCAAGACC 60.812 55.000 8.75 9.08 43.02 3.85
771 772 1.680522 ATGGATCTCGCGCAAGACCT 61.681 55.000 8.75 0.00 43.02 3.85
772 773 1.880340 GGATCTCGCGCAAGACCTG 60.880 63.158 8.75 0.00 43.02 4.00
773 774 1.880340 GATCTCGCGCAAGACCTGG 60.880 63.158 8.75 0.00 43.02 4.45
774 775 2.564553 GATCTCGCGCAAGACCTGGT 62.565 60.000 8.75 0.00 43.02 4.00
775 776 2.564553 ATCTCGCGCAAGACCTGGTC 62.565 60.000 19.20 19.20 43.02 4.02
776 777 3.288308 CTCGCGCAAGACCTGGTCT 62.288 63.158 23.49 23.49 45.64 3.85
777 778 2.811317 CGCGCAAGACCTGGTCTC 60.811 66.667 28.46 16.42 42.59 3.36
778 779 2.343758 GCGCAAGACCTGGTCTCA 59.656 61.111 28.46 0.00 42.59 3.27
779 780 1.078848 GCGCAAGACCTGGTCTCAT 60.079 57.895 28.46 12.42 42.59 2.90
780 781 0.175760 GCGCAAGACCTGGTCTCATA 59.824 55.000 28.46 0.00 42.59 2.15
781 782 1.804372 GCGCAAGACCTGGTCTCATAG 60.804 57.143 28.46 19.75 42.59 2.23
782 783 1.751351 CGCAAGACCTGGTCTCATAGA 59.249 52.381 28.46 0.00 42.59 1.98
783 784 2.166459 CGCAAGACCTGGTCTCATAGAA 59.834 50.000 28.46 0.00 42.59 2.10
784 785 3.181471 CGCAAGACCTGGTCTCATAGAAT 60.181 47.826 28.46 9.40 42.59 2.40
785 786 4.681781 CGCAAGACCTGGTCTCATAGAATT 60.682 45.833 28.46 8.64 42.59 2.17
786 787 5.189180 GCAAGACCTGGTCTCATAGAATTT 58.811 41.667 28.46 7.90 42.59 1.82
787 788 5.649831 GCAAGACCTGGTCTCATAGAATTTT 59.350 40.000 28.46 7.15 42.59 1.82
788 789 6.151817 GCAAGACCTGGTCTCATAGAATTTTT 59.848 38.462 28.46 6.63 42.59 1.94
817 818 0.615261 AACGGGGGAGAAGGAGAGAC 60.615 60.000 0.00 0.00 0.00 3.36
818 819 1.758906 CGGGGGAGAAGGAGAGACC 60.759 68.421 0.00 0.00 39.35 3.85
820 821 0.030603 GGGGGAGAAGGAGAGACCAT 60.031 60.000 0.00 0.00 42.04 3.55
830 838 0.464013 GAGAGACCATGCTGCATGCT 60.464 55.000 31.84 24.91 40.20 3.79
911 923 1.433837 AACAACGCGAGACCACCAAC 61.434 55.000 15.93 0.00 0.00 3.77
917 929 1.153628 CGAGACCACCAACCGATCC 60.154 63.158 0.00 0.00 0.00 3.36
1338 1363 3.470567 GCCGTGAGCTTCGTCGTG 61.471 66.667 10.42 0.00 38.99 4.35
1920 1951 6.351711 CATCCAGATGGTAACTGAATTCAGA 58.648 40.000 36.15 17.73 39.37 3.27
1949 1982 9.236691 TCGATTTAATTAAAATGCTGCAGAATC 57.763 29.630 20.43 11.56 37.93 2.52
1987 2021 7.864108 TGTTCATGTCATTTATCCGAATTCT 57.136 32.000 3.52 0.00 0.00 2.40
2064 2107 9.467258 ACTTTGCATATGTAAATTATGACATGC 57.533 29.630 17.72 8.36 36.92 4.06
2065 2108 8.815141 TTTGCATATGTAAATTATGACATGCC 57.185 30.769 14.12 0.00 36.92 4.40
2068 2111 8.030106 TGCATATGTAAATTATGACATGCCATG 58.970 33.333 4.56 2.40 36.92 3.66
2112 2158 0.528017 GCACACGAGATGAGGAGACA 59.472 55.000 0.00 0.00 0.00 3.41
2118 2164 2.093606 ACGAGATGAGGAGACACGTAGA 60.094 50.000 0.00 0.00 0.00 2.59
2187 2233 1.115326 GGAAAAGGCACAGCTGGGTT 61.115 55.000 19.18 3.08 0.00 4.11
2202 2248 3.319689 GCTGGGTTAAGCAAAAGGTTGTA 59.680 43.478 7.03 0.00 43.01 2.41
2354 2400 2.102554 CGATGCCGGCAATGGTAAA 58.897 52.632 36.33 7.40 0.00 2.01
2512 2558 5.851720 TCCTGAATATGATCTGAACTCTGC 58.148 41.667 0.00 0.00 0.00 4.26
2555 2606 9.288576 TCAATTCTACATTTGATAGCCTAATGG 57.711 33.333 7.54 0.00 40.63 3.16
2565 2616 3.513225 CCTAATGGGCCGCTTGTG 58.487 61.111 0.00 0.00 0.00 3.33
2697 2748 2.101783 TCAAAATCATCCAAGCGCCAT 58.898 42.857 2.29 0.00 0.00 4.40
2757 2808 4.887748 TGCTCTGGATCGAAAAGATATCC 58.112 43.478 0.00 0.00 40.26 2.59
2763 2814 5.714047 TGGATCGAAAAGATATCCGAGATG 58.286 41.667 0.00 0.00 41.81 2.90
2778 2829 2.131183 GAGATGGCAGCTATTGACGAC 58.869 52.381 4.69 0.00 37.78 4.34
2805 2856 6.706295 TGTATACTCCAATGACAATGACACA 58.294 36.000 4.17 0.00 0.00 3.72
2867 2918 3.002348 CAGAGTTTCCAACCAAAGTCGTC 59.998 47.826 0.00 0.00 39.69 4.20
2887 2938 4.260212 CGTCTGTCGAAACATTGAACAGTT 60.260 41.667 0.00 0.00 42.86 3.16
2889 2940 6.027749 GTCTGTCGAAACATTGAACAGTTTT 58.972 36.000 0.00 0.00 38.01 2.43
2891 2942 7.163682 GTCTGTCGAAACATTGAACAGTTTTAC 59.836 37.037 0.00 0.00 38.01 2.01
2892 2943 7.065324 TCTGTCGAAACATTGAACAGTTTTACT 59.935 33.333 0.00 0.00 38.01 2.24
2898 2949 9.313118 GAAACATTGAACAGTTTTACTTTGGAT 57.687 29.630 0.00 0.00 38.01 3.41
2945 2996 0.602905 ACTCCGTCAAGGCTTTTCCG 60.603 55.000 0.00 0.00 40.77 4.30
3012 3063 3.738982 TCACCTGACCATAACTGTGTTG 58.261 45.455 0.00 0.00 0.00 3.33
3238 3293 6.146347 GCAAGGACTAGTACAGTTTCTTTCAG 59.854 42.308 8.10 0.00 37.72 3.02
3239 3294 6.980416 AGGACTAGTACAGTTTCTTTCAGT 57.020 37.500 8.10 0.00 37.72 3.41
3240 3295 7.362802 AGGACTAGTACAGTTTCTTTCAGTT 57.637 36.000 8.10 0.00 37.72 3.16
3241 3296 7.210873 AGGACTAGTACAGTTTCTTTCAGTTG 58.789 38.462 8.10 0.00 37.72 3.16
3265 3320 4.199310 TCTTAATGGCATGCTAGGTTGTC 58.801 43.478 18.92 0.00 0.00 3.18
3275 3330 5.390991 GCATGCTAGGTTGTCTTGTTTAGTC 60.391 44.000 11.37 0.00 0.00 2.59
3387 3445 0.173029 TGCCAGCAACAAATATGCCG 59.827 50.000 0.00 0.00 44.91 5.69
3589 3651 5.248477 ACAGAGAATTCTTTACTGGCAGGTA 59.752 40.000 20.34 6.10 33.57 3.08
3590 3652 5.814705 CAGAGAATTCTTTACTGGCAGGTAG 59.185 44.000 20.34 12.37 0.00 3.18
3592 3654 4.536489 AGAATTCTTTACTGGCAGGTAGGT 59.464 41.667 20.34 0.00 0.00 3.08
3594 3656 3.975168 TCTTTACTGGCAGGTAGGTTC 57.025 47.619 20.34 0.00 0.00 3.62
3595 3657 3.517612 TCTTTACTGGCAGGTAGGTTCT 58.482 45.455 20.34 0.00 0.00 3.01
3608 3675 6.127310 GCAGGTAGGTTCTTTATCTCTCTCAA 60.127 42.308 0.00 0.00 0.00 3.02
3611 3678 7.621683 AGGTAGGTTCTTTATCTCTCTCAATGT 59.378 37.037 0.00 0.00 0.00 2.71
3622 3714 6.788598 TCTCTCTCAATGTCTCTAAAGCAT 57.211 37.500 0.00 0.00 0.00 3.79
3624 3716 7.939782 TCTCTCTCAATGTCTCTAAAGCATAG 58.060 38.462 0.00 0.00 0.00 2.23
3648 3740 6.989169 AGCAGCTTCTACTAACCTTCATTATG 59.011 38.462 0.00 0.00 0.00 1.90
3649 3741 6.293135 GCAGCTTCTACTAACCTTCATTATGC 60.293 42.308 0.00 0.00 0.00 3.14
3650 3742 6.989169 CAGCTTCTACTAACCTTCATTATGCT 59.011 38.462 0.00 0.00 0.00 3.79
3651 3743 7.170658 CAGCTTCTACTAACCTTCATTATGCTC 59.829 40.741 0.00 0.00 0.00 4.26
3652 3744 7.070571 AGCTTCTACTAACCTTCATTATGCTCT 59.929 37.037 0.00 0.00 0.00 4.09
3653 3745 7.170658 GCTTCTACTAACCTTCATTATGCTCTG 59.829 40.741 0.00 0.00 0.00 3.35
3654 3746 7.661536 TCTACTAACCTTCATTATGCTCTGT 57.338 36.000 0.00 0.00 0.00 3.41
3655 3747 7.717568 TCTACTAACCTTCATTATGCTCTGTC 58.282 38.462 0.00 0.00 0.00 3.51
3656 3748 6.299805 ACTAACCTTCATTATGCTCTGTCA 57.700 37.500 0.00 0.00 0.00 3.58
3657 3749 6.711277 ACTAACCTTCATTATGCTCTGTCAA 58.289 36.000 0.00 0.00 0.00 3.18
3658 3750 6.820656 ACTAACCTTCATTATGCTCTGTCAAG 59.179 38.462 0.00 0.00 0.00 3.02
3659 3751 5.171339 ACCTTCATTATGCTCTGTCAAGT 57.829 39.130 0.00 0.00 0.00 3.16
3660 3752 5.564550 ACCTTCATTATGCTCTGTCAAGTT 58.435 37.500 0.00 0.00 0.00 2.66
3661 3753 6.006449 ACCTTCATTATGCTCTGTCAAGTTT 58.994 36.000 0.00 0.00 0.00 2.66
3662 3754 6.072286 ACCTTCATTATGCTCTGTCAAGTTTG 60.072 38.462 0.00 0.00 0.00 2.93
3679 3771 7.545965 GTCAAGTTTGAAGTATAGCTGCTTCTA 59.454 37.037 7.79 14.15 42.61 2.10
3682 3774 8.655651 AGTTTGAAGTATAGCTGCTTCTATTC 57.344 34.615 7.79 8.72 42.61 1.75
3683 3775 8.260818 AGTTTGAAGTATAGCTGCTTCTATTCA 58.739 33.333 7.79 11.18 42.61 2.57
3684 3776 9.050601 GTTTGAAGTATAGCTGCTTCTATTCAT 57.949 33.333 7.79 0.00 42.61 2.57
3687 3779 9.866798 TGAAGTATAGCTGCTTCTATTCATATG 57.133 33.333 7.79 0.00 42.61 1.78
3688 3780 9.868277 GAAGTATAGCTGCTTCTATTCATATGT 57.132 33.333 7.79 0.00 40.00 2.29
3689 3781 9.650539 AAGTATAGCTGCTTCTATTCATATGTG 57.349 33.333 7.79 0.00 32.07 3.21
3690 3782 8.811017 AGTATAGCTGCTTCTATTCATATGTGT 58.189 33.333 7.79 0.00 32.07 3.72
3691 3783 9.081997 GTATAGCTGCTTCTATTCATATGTGTC 57.918 37.037 7.79 0.00 32.07 3.67
3692 3784 4.987285 AGCTGCTTCTATTCATATGTGTCG 59.013 41.667 1.90 0.00 0.00 4.35
3693 3785 4.747108 GCTGCTTCTATTCATATGTGTCGT 59.253 41.667 1.90 0.00 0.00 4.34
3695 3787 5.289595 TGCTTCTATTCATATGTGTCGTCC 58.710 41.667 1.90 0.00 0.00 4.79
3696 3788 5.069119 TGCTTCTATTCATATGTGTCGTCCT 59.931 40.000 1.90 0.00 0.00 3.85
3697 3789 5.403766 GCTTCTATTCATATGTGTCGTCCTG 59.596 44.000 1.90 0.00 0.00 3.86
3702 3802 0.908910 ATATGTGTCGTCCTGGCCAA 59.091 50.000 7.01 0.00 0.00 4.52
3710 3810 1.243342 CGTCCTGGCCAATGCAGAAA 61.243 55.000 7.01 0.00 40.13 2.52
3840 3940 0.539438 AGAAGCGGTGGAAAATGCCA 60.539 50.000 0.00 0.00 35.02 4.92
3841 3941 0.316841 GAAGCGGTGGAAAATGCCAA 59.683 50.000 0.00 0.00 40.20 4.52
3842 3942 0.033366 AAGCGGTGGAAAATGCCAAC 59.967 50.000 0.00 0.00 42.35 3.77
3849 3949 1.059942 GGAAAATGCCAACGCTTTCG 58.940 50.000 0.00 0.00 42.43 3.46
3854 3954 3.799755 GCCAACGCTTTCGCCGAT 61.800 61.111 0.00 0.00 39.84 4.18
3865 3965 0.170116 TTCGCCGATGCATTTTCACC 59.830 50.000 0.00 0.00 37.32 4.02
3905 4010 2.291089 TGAGAATCAGGGATTGCAAGCA 60.291 45.455 17.68 0.00 42.56 3.91
3919 4024 3.148412 TGCAAGCAGCTGAAATTCTGTA 58.852 40.909 20.43 0.98 45.94 2.74
3926 4031 4.669318 CAGCTGAAATTCTGTAGCAATGG 58.331 43.478 8.42 0.00 38.59 3.16
3927 4032 3.129988 AGCTGAAATTCTGTAGCAATGGC 59.870 43.478 6.58 0.00 38.59 4.40
3933 4038 0.325933 TCTGTAGCAATGGCAGCACT 59.674 50.000 0.00 0.00 44.61 4.40
3936 4041 1.017387 GTAGCAATGGCAGCACTACC 58.983 55.000 10.77 0.00 44.61 3.18
3940 4051 0.035152 CAATGGCAGCACTACCAGGA 60.035 55.000 0.00 0.00 39.88 3.86
3962 4074 5.352846 GGAGCCACTCTTTCTGAAAGATTAC 59.647 44.000 27.67 18.60 46.36 1.89
3963 4075 5.249420 AGCCACTCTTTCTGAAAGATTACC 58.751 41.667 27.67 17.96 46.36 2.85
3967 4079 6.234177 CACTCTTTCTGAAAGATTACCCAGT 58.766 40.000 27.67 18.80 46.36 4.00
3970 4082 6.407202 TCTTTCTGAAAGATTACCCAGTAGC 58.593 40.000 24.84 0.00 46.36 3.58
3972 4084 5.344743 TCTGAAAGATTACCCAGTAGCAG 57.655 43.478 0.00 0.00 38.67 4.24
3974 4086 5.955959 TCTGAAAGATTACCCAGTAGCAGTA 59.044 40.000 0.00 0.00 38.67 2.74
3975 4087 5.974108 TGAAAGATTACCCAGTAGCAGTAC 58.026 41.667 0.00 0.00 0.00 2.73
3976 4088 5.720041 TGAAAGATTACCCAGTAGCAGTACT 59.280 40.000 0.00 0.00 40.38 2.73
3977 4089 5.855740 AAGATTACCCAGTAGCAGTACTC 57.144 43.478 0.00 0.00 37.40 2.59
3978 4090 3.884091 AGATTACCCAGTAGCAGTACTCG 59.116 47.826 0.00 0.00 37.40 4.18
3979 4091 3.354948 TTACCCAGTAGCAGTACTCGA 57.645 47.619 0.00 0.00 37.40 4.04
3981 4093 2.299521 ACCCAGTAGCAGTACTCGATC 58.700 52.381 0.00 0.00 37.40 3.69
3982 4094 2.298610 CCCAGTAGCAGTACTCGATCA 58.701 52.381 0.00 0.00 37.40 2.92
3983 4095 2.292016 CCCAGTAGCAGTACTCGATCAG 59.708 54.545 0.00 0.00 37.40 2.90
3984 4096 3.206964 CCAGTAGCAGTACTCGATCAGA 58.793 50.000 0.00 0.00 37.40 3.27
3985 4097 3.002862 CCAGTAGCAGTACTCGATCAGAC 59.997 52.174 0.00 0.00 37.40 3.51
3987 4099 2.428544 AGCAGTACTCGATCAGACCT 57.571 50.000 0.00 0.00 0.00 3.85
3988 4100 2.020720 AGCAGTACTCGATCAGACCTG 58.979 52.381 0.00 3.34 0.00 4.00
3990 4102 2.223386 GCAGTACTCGATCAGACCTGTC 60.223 54.545 0.00 0.00 0.00 3.51
3991 4103 3.275143 CAGTACTCGATCAGACCTGTCT 58.725 50.000 0.00 0.00 41.37 3.41
3993 4105 4.156922 CAGTACTCGATCAGACCTGTCTTT 59.843 45.833 0.00 0.00 37.98 2.52
3995 4107 2.894126 ACTCGATCAGACCTGTCTTTGT 59.106 45.455 0.00 0.00 37.98 2.83
4188 4304 1.073923 ACCTGGTCCAACATGTTCTCC 59.926 52.381 8.48 11.54 0.00 3.71
4279 4402 1.986378 CGACTGACGAACTGGAATGTC 59.014 52.381 0.00 0.00 45.77 3.06
4289 4412 1.482182 ACTGGAATGTCGCTGCAGATA 59.518 47.619 20.43 0.05 35.92 1.98
4611 4734 6.862593 TCTACTAGTAGGGCACTAAGCATTCA 60.863 42.308 26.06 1.96 39.28 2.57
4680 4803 6.042638 ACAACTCAGTCATATGTAGTGCTT 57.957 37.500 1.90 0.00 0.00 3.91
4733 4858 1.816074 AACGTATGTTCGCATGGGTT 58.184 45.000 9.86 0.00 38.47 4.11
4734 4859 1.816074 ACGTATGTTCGCATGGGTTT 58.184 45.000 9.86 0.00 38.47 3.27
4735 4860 1.735571 ACGTATGTTCGCATGGGTTTC 59.264 47.619 9.86 2.69 38.47 2.78
4759 4884 5.058149 TCACAATATTTTCACGCATGCTT 57.942 34.783 17.13 2.67 0.00 3.91
4786 4911 3.499918 AGTGTTTGCTGAGCTGAACATAC 59.500 43.478 22.56 14.40 37.51 2.39
4789 4914 4.214119 TGTTTGCTGAGCTGAACATACTTC 59.786 41.667 18.20 0.00 33.29 3.01
4839 4966 7.582435 TTGTTTTTCTGTTTTGAAATACGCA 57.418 28.000 0.00 0.00 39.22 5.24
4880 5008 1.154035 CATTTCCTTTGGCCGCGTC 60.154 57.895 4.92 0.00 0.00 5.19
4881 5009 1.602323 ATTTCCTTTGGCCGCGTCA 60.602 52.632 4.92 0.00 0.00 4.35
4882 5010 1.175983 ATTTCCTTTGGCCGCGTCAA 61.176 50.000 4.92 6.70 0.00 3.18
4883 5011 1.791103 TTTCCTTTGGCCGCGTCAAG 61.791 55.000 4.92 0.99 0.00 3.02
4884 5012 2.951475 TTCCTTTGGCCGCGTCAAGT 62.951 55.000 4.92 0.00 0.00 3.16
4885 5013 2.551912 CCTTTGGCCGCGTCAAGTT 61.552 57.895 4.92 0.00 0.00 2.66
4886 5014 1.358759 CTTTGGCCGCGTCAAGTTT 59.641 52.632 4.92 0.00 0.00 2.66
4887 5015 0.248866 CTTTGGCCGCGTCAAGTTTT 60.249 50.000 4.92 0.00 0.00 2.43
4888 5016 0.248702 TTTGGCCGCGTCAAGTTTTC 60.249 50.000 4.92 0.00 0.00 2.29
4889 5017 2.065906 TTGGCCGCGTCAAGTTTTCC 62.066 55.000 4.92 0.00 0.00 3.13
4891 5019 1.357334 GCCGCGTCAAGTTTTCCAA 59.643 52.632 4.92 0.00 0.00 3.53
4892 5020 0.039527 GCCGCGTCAAGTTTTCCAAT 60.040 50.000 4.92 0.00 0.00 3.16
4893 5021 1.198178 GCCGCGTCAAGTTTTCCAATA 59.802 47.619 4.92 0.00 0.00 1.90
4894 5022 2.350964 GCCGCGTCAAGTTTTCCAATAA 60.351 45.455 4.92 0.00 0.00 1.40
4895 5023 3.672241 GCCGCGTCAAGTTTTCCAATAAT 60.672 43.478 4.92 0.00 0.00 1.28
4896 5024 4.437659 GCCGCGTCAAGTTTTCCAATAATA 60.438 41.667 4.92 0.00 0.00 0.98
4897 5025 5.732247 GCCGCGTCAAGTTTTCCAATAATAT 60.732 40.000 4.92 0.00 0.00 1.28
4902 5031 9.997482 GCGTCAAGTTTTCCAATAATATTTAGA 57.003 29.630 0.00 0.00 0.00 2.10
4974 5103 8.414003 TGGTTAACATTTACACATTGCTTACAA 58.586 29.630 8.10 0.00 40.87 2.41
4995 5124 1.804748 AGCCGTTTCATTCGAGTTTCC 59.195 47.619 0.00 0.00 0.00 3.13
5068 5198 1.003580 GTCAAGACCAAGAGGATGGCA 59.996 52.381 0.00 0.00 44.75 4.92
5078 5208 4.301628 CAAGAGGATGGCAAAAACAGTTC 58.698 43.478 0.00 0.00 0.00 3.01
5098 5230 2.367241 TCCTGAATCGGACACACTTCAA 59.633 45.455 0.00 0.00 0.00 2.69
5156 5288 6.002704 AGCATGGATCAAATAATCAGAGACC 58.997 40.000 0.00 0.00 0.00 3.85
5245 5377 2.959516 AGATCAGCAAATCGAACGTCA 58.040 42.857 0.00 0.00 0.00 4.35
5246 5378 3.325870 AGATCAGCAAATCGAACGTCAA 58.674 40.909 0.00 0.00 0.00 3.18
5253 5385 3.789224 GCAAATCGAACGTCAAACAGTTT 59.211 39.130 0.00 0.00 0.00 2.66
5254 5386 4.965158 GCAAATCGAACGTCAAACAGTTTA 59.035 37.500 0.00 0.00 0.00 2.01
5256 5388 6.415702 CAAATCGAACGTCAAACAGTTTAGA 58.584 36.000 0.00 0.00 0.00 2.10
5260 5392 3.547054 ACGTCAAACAGTTTAGACCCA 57.453 42.857 16.51 0.00 0.00 4.51
5283 5415 1.544724 GCATAGTTGTGCTTCCCCAA 58.455 50.000 0.00 0.00 41.82 4.12
5297 5429 4.513692 GCTTCCCCAAAAATTTAACCACAC 59.486 41.667 0.00 0.00 0.00 3.82
5304 5436 5.526846 CCAAAAATTTAACCACACATGTGCT 59.473 36.000 25.68 10.24 44.34 4.40
5397 5542 4.913784 TGGGGAAGGACATGTTAGTTTAC 58.086 43.478 0.00 0.00 0.00 2.01
5408 5553 7.328277 ACATGTTAGTTTACTTGAAAGCACA 57.672 32.000 0.00 0.00 0.00 4.57
5415 5560 6.354130 AGTTTACTTGAAAGCACAGGTTAGA 58.646 36.000 0.00 0.00 32.63 2.10
5426 5571 7.440523 AAGCACAGGTTAGAATAGTTTGAAG 57.559 36.000 0.00 0.00 0.00 3.02
5430 5575 6.206634 CACAGGTTAGAATAGTTTGAAGGCAA 59.793 38.462 0.00 0.00 0.00 4.52
5431 5576 6.206829 ACAGGTTAGAATAGTTTGAAGGCAAC 59.793 38.462 0.00 0.00 32.79 4.17
5432 5577 6.206634 CAGGTTAGAATAGTTTGAAGGCAACA 59.793 38.462 0.00 0.00 41.41 3.33
5433 5578 6.948309 AGGTTAGAATAGTTTGAAGGCAACAT 59.052 34.615 0.00 0.00 41.41 2.71
5434 5579 8.107095 AGGTTAGAATAGTTTGAAGGCAACATA 58.893 33.333 0.00 0.00 41.41 2.29
5439 5584 8.253113 AGAATAGTTTGAAGGCAACATATTTGG 58.747 33.333 0.00 0.00 41.41 3.28
5440 5585 5.806654 AGTTTGAAGGCAACATATTTGGT 57.193 34.783 0.00 0.00 41.41 3.67
5441 5586 5.540911 AGTTTGAAGGCAACATATTTGGTG 58.459 37.500 0.00 0.00 43.81 4.17
5442 5587 5.304101 AGTTTGAAGGCAACATATTTGGTGA 59.696 36.000 5.27 0.00 43.67 4.02
5443 5588 5.798125 TTGAAGGCAACATATTTGGTGAA 57.202 34.783 5.27 0.00 43.67 3.18
5444 5589 5.999205 TGAAGGCAACATATTTGGTGAAT 57.001 34.783 5.27 0.00 43.67 2.57
5445 5590 5.964758 TGAAGGCAACATATTTGGTGAATC 58.035 37.500 5.27 0.71 43.67 2.52
5446 5591 5.105392 TGAAGGCAACATATTTGGTGAATCC 60.105 40.000 5.27 0.00 43.67 3.01
5447 5592 4.613437 AGGCAACATATTTGGTGAATCCT 58.387 39.130 5.27 0.00 43.67 3.24
5448 5593 5.765510 AGGCAACATATTTGGTGAATCCTA 58.234 37.500 5.27 0.00 43.67 2.94
5449 5594 5.594317 AGGCAACATATTTGGTGAATCCTAC 59.406 40.000 5.27 0.00 43.67 3.18
5450 5595 5.221244 GGCAACATATTTGGTGAATCCTACC 60.221 44.000 5.27 0.00 43.67 3.18
5451 5596 5.594317 GCAACATATTTGGTGAATCCTACCT 59.406 40.000 5.27 0.00 43.67 3.08
5452 5597 6.770785 GCAACATATTTGGTGAATCCTACCTA 59.229 38.462 5.27 0.00 43.67 3.08
5453 5598 7.041098 GCAACATATTTGGTGAATCCTACCTAG 60.041 40.741 5.27 0.00 43.67 3.02
5454 5599 7.691993 ACATATTTGGTGAATCCTACCTAGT 57.308 36.000 0.00 0.00 39.01 2.57
5455 5600 8.102484 ACATATTTGGTGAATCCTACCTAGTT 57.898 34.615 0.00 0.00 39.01 2.24
5456 5601 8.211629 ACATATTTGGTGAATCCTACCTAGTTC 58.788 37.037 0.00 0.00 39.01 3.01
5457 5602 4.730949 TTGGTGAATCCTACCTAGTTCG 57.269 45.455 0.00 0.00 39.01 3.95
5458 5603 3.705051 TGGTGAATCCTACCTAGTTCGT 58.295 45.455 0.00 0.00 39.01 3.85
5459 5604 3.446161 TGGTGAATCCTACCTAGTTCGTG 59.554 47.826 0.00 0.00 39.01 4.35
5460 5605 3.446516 GGTGAATCCTACCTAGTTCGTGT 59.553 47.826 0.00 0.00 35.30 4.49
5461 5606 4.641989 GGTGAATCCTACCTAGTTCGTGTA 59.358 45.833 0.00 0.00 35.30 2.90
5462 5607 5.301298 GGTGAATCCTACCTAGTTCGTGTAT 59.699 44.000 0.00 0.00 35.30 2.29
5463 5608 6.437094 GTGAATCCTACCTAGTTCGTGTATC 58.563 44.000 0.00 0.00 0.00 2.24
5464 5609 5.533903 TGAATCCTACCTAGTTCGTGTATCC 59.466 44.000 0.00 0.00 0.00 2.59
5465 5610 3.470709 TCCTACCTAGTTCGTGTATCCG 58.529 50.000 0.00 0.00 0.00 4.18
5466 5611 3.118261 TCCTACCTAGTTCGTGTATCCGT 60.118 47.826 0.00 0.00 0.00 4.69
5467 5612 3.003068 CCTACCTAGTTCGTGTATCCGTG 59.997 52.174 0.00 0.00 0.00 4.94
5468 5613 2.440409 ACCTAGTTCGTGTATCCGTGT 58.560 47.619 0.00 0.00 0.00 4.49
5469 5614 3.609853 ACCTAGTTCGTGTATCCGTGTA 58.390 45.455 0.00 0.00 0.00 2.90
5470 5615 3.624861 ACCTAGTTCGTGTATCCGTGTAG 59.375 47.826 0.00 0.00 0.00 2.74
5471 5616 2.556534 AGTTCGTGTATCCGTGTAGC 57.443 50.000 0.00 0.00 0.00 3.58
5472 5617 1.133790 AGTTCGTGTATCCGTGTAGCC 59.866 52.381 0.00 0.00 0.00 3.93
5473 5618 0.099259 TTCGTGTATCCGTGTAGCCG 59.901 55.000 0.00 0.00 0.00 5.52
5474 5619 1.026182 TCGTGTATCCGTGTAGCCGT 61.026 55.000 0.00 0.00 0.00 5.68
5475 5620 0.179156 CGTGTATCCGTGTAGCCGTT 60.179 55.000 0.00 0.00 0.00 4.44
5476 5621 1.553308 GTGTATCCGTGTAGCCGTTC 58.447 55.000 0.00 0.00 0.00 3.95
5477 5622 0.457035 TGTATCCGTGTAGCCGTTCC 59.543 55.000 0.00 0.00 0.00 3.62
5478 5623 0.457035 GTATCCGTGTAGCCGTTCCA 59.543 55.000 0.00 0.00 0.00 3.53
5479 5624 1.068127 GTATCCGTGTAGCCGTTCCAT 59.932 52.381 0.00 0.00 0.00 3.41
5480 5625 0.539986 ATCCGTGTAGCCGTTCCATT 59.460 50.000 0.00 0.00 0.00 3.16
5481 5626 0.322322 TCCGTGTAGCCGTTCCATTT 59.678 50.000 0.00 0.00 0.00 2.32
5482 5627 0.725117 CCGTGTAGCCGTTCCATTTC 59.275 55.000 0.00 0.00 0.00 2.17
5483 5628 1.434555 CGTGTAGCCGTTCCATTTCA 58.565 50.000 0.00 0.00 0.00 2.69
5484 5629 1.393539 CGTGTAGCCGTTCCATTTCAG 59.606 52.381 0.00 0.00 0.00 3.02
5485 5630 1.130561 GTGTAGCCGTTCCATTTCAGC 59.869 52.381 0.00 0.00 0.00 4.26
5486 5631 0.733150 GTAGCCGTTCCATTTCAGCC 59.267 55.000 0.00 0.00 0.00 4.85
5487 5632 0.393808 TAGCCGTTCCATTTCAGCCC 60.394 55.000 0.00 0.00 0.00 5.19
5488 5633 2.710902 GCCGTTCCATTTCAGCCCC 61.711 63.158 0.00 0.00 0.00 5.80
5489 5634 1.304052 CCGTTCCATTTCAGCCCCA 60.304 57.895 0.00 0.00 0.00 4.96
5490 5635 1.595093 CCGTTCCATTTCAGCCCCAC 61.595 60.000 0.00 0.00 0.00 4.61
5491 5636 1.883021 GTTCCATTTCAGCCCCACG 59.117 57.895 0.00 0.00 0.00 4.94
5492 5637 0.608035 GTTCCATTTCAGCCCCACGA 60.608 55.000 0.00 0.00 0.00 4.35
5493 5638 0.331278 TTCCATTTCAGCCCCACGAT 59.669 50.000 0.00 0.00 0.00 3.73
5494 5639 0.107214 TCCATTTCAGCCCCACGATC 60.107 55.000 0.00 0.00 0.00 3.69
5495 5640 0.107017 CCATTTCAGCCCCACGATCT 60.107 55.000 0.00 0.00 0.00 2.75
5496 5641 1.683011 CCATTTCAGCCCCACGATCTT 60.683 52.381 0.00 0.00 0.00 2.40
5497 5642 2.421388 CCATTTCAGCCCCACGATCTTA 60.421 50.000 0.00 0.00 0.00 2.10
5498 5643 3.278574 CATTTCAGCCCCACGATCTTAA 58.721 45.455 0.00 0.00 0.00 1.85
5499 5644 3.644966 TTTCAGCCCCACGATCTTAAT 57.355 42.857 0.00 0.00 0.00 1.40
5500 5645 2.910688 TCAGCCCCACGATCTTAATC 57.089 50.000 0.00 0.00 0.00 1.75
5501 5646 1.416401 TCAGCCCCACGATCTTAATCC 59.584 52.381 0.00 0.00 0.00 3.01
5502 5647 0.765510 AGCCCCACGATCTTAATCCC 59.234 55.000 0.00 0.00 0.00 3.85
5503 5648 0.602905 GCCCCACGATCTTAATCCCG 60.603 60.000 0.00 0.00 0.00 5.14
5504 5649 1.045407 CCCCACGATCTTAATCCCGA 58.955 55.000 0.00 0.00 0.00 5.14
5505 5650 1.000955 CCCCACGATCTTAATCCCGAG 59.999 57.143 0.00 0.00 0.00 4.63
5506 5651 1.605712 CCCACGATCTTAATCCCGAGC 60.606 57.143 0.00 0.00 0.00 5.03
5507 5652 1.068588 CCACGATCTTAATCCCGAGCA 59.931 52.381 0.00 0.00 0.00 4.26
5508 5653 2.289072 CCACGATCTTAATCCCGAGCAT 60.289 50.000 0.00 0.00 0.00 3.79
5509 5654 2.989840 CACGATCTTAATCCCGAGCATC 59.010 50.000 0.00 0.00 0.00 3.91
5510 5655 2.628178 ACGATCTTAATCCCGAGCATCA 59.372 45.455 0.00 0.00 33.17 3.07
5511 5656 2.989840 CGATCTTAATCCCGAGCATCAC 59.010 50.000 0.00 0.00 33.17 3.06
5512 5657 3.552890 CGATCTTAATCCCGAGCATCACA 60.553 47.826 0.00 0.00 33.17 3.58
5513 5658 3.179443 TCTTAATCCCGAGCATCACAC 57.821 47.619 0.00 0.00 33.17 3.82
5514 5659 1.860950 CTTAATCCCGAGCATCACACG 59.139 52.381 0.00 0.00 33.17 4.49
5515 5660 1.107945 TAATCCCGAGCATCACACGA 58.892 50.000 0.00 0.00 33.84 4.35
5516 5661 0.179100 AATCCCGAGCATCACACGAG 60.179 55.000 0.00 0.00 33.84 4.18
5517 5662 2.635229 ATCCCGAGCATCACACGAGC 62.635 60.000 0.00 0.00 33.84 5.03
5518 5663 2.887568 CCGAGCATCACACGAGCC 60.888 66.667 0.00 0.00 33.84 4.70
5519 5664 2.182791 CGAGCATCACACGAGCCT 59.817 61.111 0.00 0.00 33.84 4.58
5520 5665 1.433471 CGAGCATCACACGAGCCTA 59.567 57.895 0.00 0.00 33.84 3.93
5521 5666 0.593518 CGAGCATCACACGAGCCTAG 60.594 60.000 0.00 0.00 33.84 3.02
5522 5667 0.249238 GAGCATCACACGAGCCTAGG 60.249 60.000 3.67 3.67 33.17 3.02
5523 5668 1.227380 GCATCACACGAGCCTAGGG 60.227 63.158 11.72 0.00 0.00 3.53
5524 5669 1.676678 GCATCACACGAGCCTAGGGA 61.677 60.000 11.72 0.00 0.00 4.20
5525 5670 0.103208 CATCACACGAGCCTAGGGAC 59.897 60.000 11.72 0.00 0.00 4.46
5526 5671 0.033011 ATCACACGAGCCTAGGGACT 60.033 55.000 11.72 0.00 46.37 3.85
5527 5672 0.622136 TCACACGAGCCTAGGGACTA 59.378 55.000 11.72 0.00 41.75 2.59
5528 5673 1.005097 TCACACGAGCCTAGGGACTAA 59.995 52.381 11.72 0.00 42.17 2.24
5529 5674 2.032620 CACACGAGCCTAGGGACTAAT 58.967 52.381 11.72 0.00 42.17 1.73
5530 5675 2.431057 CACACGAGCCTAGGGACTAATT 59.569 50.000 11.72 0.00 42.17 1.40
5531 5676 3.635373 CACACGAGCCTAGGGACTAATTA 59.365 47.826 11.72 0.00 42.17 1.40
5532 5677 3.635836 ACACGAGCCTAGGGACTAATTAC 59.364 47.826 11.72 0.00 42.17 1.89
5533 5678 2.883386 ACGAGCCTAGGGACTAATTACG 59.117 50.000 11.72 2.25 42.17 3.18
5534 5679 2.883386 CGAGCCTAGGGACTAATTACGT 59.117 50.000 11.72 0.00 42.17 3.57
5535 5680 3.317430 CGAGCCTAGGGACTAATTACGTT 59.683 47.826 11.72 0.00 42.17 3.99
5536 5681 4.202090 CGAGCCTAGGGACTAATTACGTTT 60.202 45.833 11.72 0.00 42.17 3.60
5537 5682 5.009010 CGAGCCTAGGGACTAATTACGTTTA 59.991 44.000 11.72 0.00 42.17 2.01
5538 5683 6.402456 AGCCTAGGGACTAATTACGTTTAG 57.598 41.667 11.72 0.00 42.17 1.85
5539 5684 4.987285 GCCTAGGGACTAATTACGTTTAGC 59.013 45.833 11.72 1.46 42.17 3.09
5540 5685 5.536260 CCTAGGGACTAATTACGTTTAGCC 58.464 45.833 0.00 8.64 42.17 3.93
5541 5686 4.050852 AGGGACTAATTACGTTTAGCCG 57.949 45.455 6.88 0.00 36.02 5.52
5542 5687 2.541346 GGGACTAATTACGTTTAGCCGC 59.459 50.000 6.88 1.70 33.34 6.53
5543 5688 2.541346 GGACTAATTACGTTTAGCCGCC 59.459 50.000 6.88 3.62 33.34 6.13
5544 5689 2.541346 GACTAATTACGTTTAGCCGCCC 59.459 50.000 6.88 0.00 33.34 6.13
5545 5690 2.169144 ACTAATTACGTTTAGCCGCCCT 59.831 45.455 6.88 0.00 33.34 5.19
5546 5691 1.660167 AATTACGTTTAGCCGCCCTC 58.340 50.000 0.00 0.00 0.00 4.30
5547 5692 0.828677 ATTACGTTTAGCCGCCCTCT 59.171 50.000 0.00 0.00 0.00 3.69
5548 5693 0.174162 TTACGTTTAGCCGCCCTCTC 59.826 55.000 0.00 0.00 0.00 3.20
5549 5694 0.682209 TACGTTTAGCCGCCCTCTCT 60.682 55.000 0.00 0.00 0.00 3.10
5550 5695 1.519455 CGTTTAGCCGCCCTCTCTG 60.519 63.158 0.00 0.00 0.00 3.35
5551 5696 1.597461 GTTTAGCCGCCCTCTCTGT 59.403 57.895 0.00 0.00 0.00 3.41
5552 5697 0.822164 GTTTAGCCGCCCTCTCTGTA 59.178 55.000 0.00 0.00 0.00 2.74
5553 5698 1.206371 GTTTAGCCGCCCTCTCTGTAA 59.794 52.381 0.00 0.00 0.00 2.41
5554 5699 1.789523 TTAGCCGCCCTCTCTGTAAT 58.210 50.000 0.00 0.00 0.00 1.89
5555 5700 1.329256 TAGCCGCCCTCTCTGTAATC 58.671 55.000 0.00 0.00 0.00 1.75
5556 5701 0.397816 AGCCGCCCTCTCTGTAATCT 60.398 55.000 0.00 0.00 0.00 2.40
5557 5702 1.133450 AGCCGCCCTCTCTGTAATCTA 60.133 52.381 0.00 0.00 0.00 1.98
5558 5703 1.687123 GCCGCCCTCTCTGTAATCTAA 59.313 52.381 0.00 0.00 0.00 2.10
5559 5704 2.546162 GCCGCCCTCTCTGTAATCTAAC 60.546 54.545 0.00 0.00 0.00 2.34
5560 5705 2.693591 CCGCCCTCTCTGTAATCTAACA 59.306 50.000 0.00 0.00 0.00 2.41
5561 5706 3.132289 CCGCCCTCTCTGTAATCTAACAA 59.868 47.826 0.00 0.00 0.00 2.83
5562 5707 4.113354 CGCCCTCTCTGTAATCTAACAAC 58.887 47.826 0.00 0.00 0.00 3.32
5563 5708 4.443621 GCCCTCTCTGTAATCTAACAACC 58.556 47.826 0.00 0.00 0.00 3.77
5564 5709 4.081087 GCCCTCTCTGTAATCTAACAACCA 60.081 45.833 0.00 0.00 0.00 3.67
5565 5710 5.396884 GCCCTCTCTGTAATCTAACAACCAT 60.397 44.000 0.00 0.00 0.00 3.55
5566 5711 6.284459 CCCTCTCTGTAATCTAACAACCATC 58.716 44.000 0.00 0.00 0.00 3.51
5567 5712 6.098982 CCCTCTCTGTAATCTAACAACCATCT 59.901 42.308 0.00 0.00 0.00 2.90
5568 5713 7.365117 CCCTCTCTGTAATCTAACAACCATCTT 60.365 40.741 0.00 0.00 0.00 2.40
5569 5714 8.696374 CCTCTCTGTAATCTAACAACCATCTTA 58.304 37.037 0.00 0.00 0.00 2.10
5578 5723 9.739276 AATCTAACAACCATCTTAATTCACAGA 57.261 29.630 0.00 0.00 0.00 3.41
5579 5724 9.739276 ATCTAACAACCATCTTAATTCACAGAA 57.261 29.630 0.00 0.00 0.00 3.02
5580 5725 9.567776 TCTAACAACCATCTTAATTCACAGAAA 57.432 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.504175 TCGTAGCTGCTTCCCCTAAAAT 59.496 45.455 7.79 0.00 0.00 1.82
2 3 1.903860 TCGTAGCTGCTTCCCCTAAAA 59.096 47.619 7.79 0.00 0.00 1.52
3 4 1.563924 TCGTAGCTGCTTCCCCTAAA 58.436 50.000 7.79 0.00 0.00 1.85
4 5 1.687123 GATCGTAGCTGCTTCCCCTAA 59.313 52.381 7.79 0.00 0.00 2.69
5 6 1.329256 GATCGTAGCTGCTTCCCCTA 58.671 55.000 7.79 0.00 0.00 3.53
7 8 1.069935 GGATCGTAGCTGCTTCCCC 59.930 63.158 7.79 0.00 0.00 4.81
8 9 1.300233 CGGATCGTAGCTGCTTCCC 60.300 63.158 7.79 0.00 0.00 3.97
9 10 1.951631 GCGGATCGTAGCTGCTTCC 60.952 63.158 7.79 7.82 34.83 3.46
10 11 2.296480 CGCGGATCGTAGCTGCTTC 61.296 63.158 7.79 0.77 35.51 3.86
11 12 2.278857 CGCGGATCGTAGCTGCTT 60.279 61.111 7.79 0.00 35.51 3.91
12 13 4.271816 CCGCGGATCGTAGCTGCT 62.272 66.667 24.07 7.57 35.51 4.24
13 14 3.768185 TTCCGCGGATCGTAGCTGC 62.768 63.158 31.56 0.00 36.19 5.25
14 15 0.804544 TTTTCCGCGGATCGTAGCTG 60.805 55.000 31.56 0.00 36.19 4.24
15 16 0.108520 TTTTTCCGCGGATCGTAGCT 60.109 50.000 31.56 0.00 36.19 3.32
16 17 2.375981 TTTTTCCGCGGATCGTAGC 58.624 52.632 31.56 0.00 36.19 3.58
44 45 6.042552 CACCTGATTTATATGAGACCTGGTCT 59.957 42.308 28.70 28.70 46.42 3.85
45 46 6.042093 TCACCTGATTTATATGAGACCTGGTC 59.958 42.308 19.20 19.20 0.00 4.02
46 47 5.905331 TCACCTGATTTATATGAGACCTGGT 59.095 40.000 0.00 0.00 0.00 4.00
47 48 6.268617 TCTCACCTGATTTATATGAGACCTGG 59.731 42.308 0.00 0.00 40.59 4.45
48 49 7.295322 TCTCACCTGATTTATATGAGACCTG 57.705 40.000 0.00 0.00 40.59 4.00
52 53 6.672266 GGGTCTCACCTGATTTATATGAGA 57.328 41.667 0.00 0.00 42.63 3.27
65 66 3.625632 ATCAGGGCGGGTCTCACCT 62.626 63.158 0.00 0.00 38.64 4.00
66 67 3.083997 ATCAGGGCGGGTCTCACC 61.084 66.667 0.00 0.00 37.60 4.02
67 68 1.899437 TTCATCAGGGCGGGTCTCAC 61.899 60.000 0.00 0.00 0.00 3.51
68 69 0.982852 ATTCATCAGGGCGGGTCTCA 60.983 55.000 0.00 0.00 0.00 3.27
69 70 0.533755 CATTCATCAGGGCGGGTCTC 60.534 60.000 0.00 0.00 0.00 3.36
70 71 1.528824 CATTCATCAGGGCGGGTCT 59.471 57.895 0.00 0.00 0.00 3.85
71 72 4.147701 CATTCATCAGGGCGGGTC 57.852 61.111 0.00 0.00 0.00 4.46
630 631 1.655597 CACGTGTCATTCATCAGGACG 59.344 52.381 7.58 0.00 34.32 4.79
631 632 2.002586 CCACGTGTCATTCATCAGGAC 58.997 52.381 15.65 0.00 0.00 3.85
632 633 1.675714 GCCACGTGTCATTCATCAGGA 60.676 52.381 15.65 0.00 0.00 3.86
633 634 0.729116 GCCACGTGTCATTCATCAGG 59.271 55.000 15.65 0.00 0.00 3.86
634 635 1.441738 TGCCACGTGTCATTCATCAG 58.558 50.000 15.65 0.00 0.00 2.90
635 636 2.112380 ATGCCACGTGTCATTCATCA 57.888 45.000 15.65 0.00 0.00 3.07
636 637 3.056952 GAATGCCACGTGTCATTCATC 57.943 47.619 35.00 17.82 44.71 2.92
639 640 2.247311 GTGAATGCCACGTGTCATTC 57.753 50.000 33.99 33.99 45.24 2.67
648 649 3.184986 GCTTTGTGATTTGTGAATGCCAC 59.815 43.478 0.00 0.00 45.88 5.01
649 650 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
650 651 3.391965 TGCTTTGTGATTTGTGAATGCC 58.608 40.909 0.00 0.00 0.00 4.40
651 652 4.927425 AGATGCTTTGTGATTTGTGAATGC 59.073 37.500 0.00 0.00 0.00 3.56
652 653 8.697846 ATTAGATGCTTTGTGATTTGTGAATG 57.302 30.769 0.00 0.00 0.00 2.67
653 654 8.746530 AGATTAGATGCTTTGTGATTTGTGAAT 58.253 29.630 0.00 0.00 0.00 2.57
654 655 8.114331 AGATTAGATGCTTTGTGATTTGTGAA 57.886 30.769 0.00 0.00 0.00 3.18
655 656 7.609146 AGAGATTAGATGCTTTGTGATTTGTGA 59.391 33.333 0.00 0.00 0.00 3.58
656 657 7.759465 AGAGATTAGATGCTTTGTGATTTGTG 58.241 34.615 0.00 0.00 0.00 3.33
657 658 7.828223 AGAGAGATTAGATGCTTTGTGATTTGT 59.172 33.333 0.00 0.00 0.00 2.83
658 659 8.211116 AGAGAGATTAGATGCTTTGTGATTTG 57.789 34.615 0.00 0.00 0.00 2.32
659 660 7.498570 GGAGAGAGATTAGATGCTTTGTGATTT 59.501 37.037 0.00 0.00 0.00 2.17
660 661 6.991531 GGAGAGAGATTAGATGCTTTGTGATT 59.008 38.462 0.00 0.00 0.00 2.57
661 662 6.464180 GGGAGAGAGATTAGATGCTTTGTGAT 60.464 42.308 0.00 0.00 0.00 3.06
662 663 5.163364 GGGAGAGAGATTAGATGCTTTGTGA 60.163 44.000 0.00 0.00 0.00 3.58
663 664 5.055812 GGGAGAGAGATTAGATGCTTTGTG 58.944 45.833 0.00 0.00 0.00 3.33
664 665 4.102367 GGGGAGAGAGATTAGATGCTTTGT 59.898 45.833 0.00 0.00 0.00 2.83
665 666 4.504689 GGGGGAGAGAGATTAGATGCTTTG 60.505 50.000 0.00 0.00 0.00 2.77
666 667 3.650461 GGGGGAGAGAGATTAGATGCTTT 59.350 47.826 0.00 0.00 0.00 3.51
667 668 3.116395 AGGGGGAGAGAGATTAGATGCTT 60.116 47.826 0.00 0.00 0.00 3.91
668 669 2.454381 AGGGGGAGAGAGATTAGATGCT 59.546 50.000 0.00 0.00 0.00 3.79
669 670 2.566724 CAGGGGGAGAGAGATTAGATGC 59.433 54.545 0.00 0.00 0.00 3.91
670 671 4.125124 TCAGGGGGAGAGAGATTAGATG 57.875 50.000 0.00 0.00 0.00 2.90
671 672 5.367618 AATCAGGGGGAGAGAGATTAGAT 57.632 43.478 0.00 0.00 0.00 1.98
672 673 4.841813 AATCAGGGGGAGAGAGATTAGA 57.158 45.455 0.00 0.00 0.00 2.10
673 674 5.903198 AAAATCAGGGGGAGAGAGATTAG 57.097 43.478 0.00 0.00 0.00 1.73
674 675 6.909158 ACTTAAAATCAGGGGGAGAGAGATTA 59.091 38.462 0.00 0.00 0.00 1.75
675 676 5.733647 ACTTAAAATCAGGGGGAGAGAGATT 59.266 40.000 0.00 0.00 0.00 2.40
676 677 5.292815 ACTTAAAATCAGGGGGAGAGAGAT 58.707 41.667 0.00 0.00 0.00 2.75
677 678 4.699994 ACTTAAAATCAGGGGGAGAGAGA 58.300 43.478 0.00 0.00 0.00 3.10
678 679 5.071115 CCTACTTAAAATCAGGGGGAGAGAG 59.929 48.000 0.00 0.00 0.00 3.20
679 680 4.969359 CCTACTTAAAATCAGGGGGAGAGA 59.031 45.833 0.00 0.00 0.00 3.10
680 681 4.103311 CCCTACTTAAAATCAGGGGGAGAG 59.897 50.000 0.00 0.00 43.55 3.20
681 682 4.045022 CCCTACTTAAAATCAGGGGGAGA 58.955 47.826 0.00 0.00 43.55 3.71
682 683 4.439253 CCCTACTTAAAATCAGGGGGAG 57.561 50.000 0.00 0.00 43.55 4.30
686 687 3.372675 CCACCCCCTACTTAAAATCAGGG 60.373 52.174 0.00 0.00 46.35 4.45
687 688 3.372675 CCCACCCCCTACTTAAAATCAGG 60.373 52.174 0.00 0.00 0.00 3.86
688 689 3.372675 CCCCACCCCCTACTTAAAATCAG 60.373 52.174 0.00 0.00 0.00 2.90
689 690 2.583566 CCCCACCCCCTACTTAAAATCA 59.416 50.000 0.00 0.00 0.00 2.57
690 691 2.091499 CCCCCACCCCCTACTTAAAATC 60.091 54.545 0.00 0.00 0.00 2.17
691 692 1.934480 CCCCCACCCCCTACTTAAAAT 59.066 52.381 0.00 0.00 0.00 1.82
692 693 1.131804 TCCCCCACCCCCTACTTAAAA 60.132 52.381 0.00 0.00 0.00 1.52
693 694 0.501934 TCCCCCACCCCCTACTTAAA 59.498 55.000 0.00 0.00 0.00 1.52
694 695 0.732584 ATCCCCCACCCCCTACTTAA 59.267 55.000 0.00 0.00 0.00 1.85
695 696 1.223858 GTATCCCCCACCCCCTACTTA 59.776 57.143 0.00 0.00 0.00 2.24
696 697 0.029371 GTATCCCCCACCCCCTACTT 60.029 60.000 0.00 0.00 0.00 2.24
697 698 0.939961 AGTATCCCCCACCCCCTACT 60.940 60.000 0.00 0.00 0.00 2.57
698 699 0.029371 AAGTATCCCCCACCCCCTAC 60.029 60.000 0.00 0.00 0.00 3.18
699 700 0.732584 AAAGTATCCCCCACCCCCTA 59.267 55.000 0.00 0.00 0.00 3.53
700 701 0.924226 CAAAGTATCCCCCACCCCCT 60.924 60.000 0.00 0.00 0.00 4.79
701 702 1.219131 ACAAAGTATCCCCCACCCCC 61.219 60.000 0.00 0.00 0.00 5.40
702 703 0.033503 CACAAAGTATCCCCCACCCC 60.034 60.000 0.00 0.00 0.00 4.95
703 704 0.996583 TCACAAAGTATCCCCCACCC 59.003 55.000 0.00 0.00 0.00 4.61
704 705 3.382083 AATCACAAAGTATCCCCCACC 57.618 47.619 0.00 0.00 0.00 4.61
705 706 4.082245 CACAAATCACAAAGTATCCCCCAC 60.082 45.833 0.00 0.00 0.00 4.61
706 707 4.085733 CACAAATCACAAAGTATCCCCCA 58.914 43.478 0.00 0.00 0.00 4.96
707 708 4.340617 TCACAAATCACAAAGTATCCCCC 58.659 43.478 0.00 0.00 0.00 5.40
708 709 5.975693 TTCACAAATCACAAAGTATCCCC 57.024 39.130 0.00 0.00 0.00 4.81
709 710 5.807011 GCATTCACAAATCACAAAGTATCCC 59.193 40.000 0.00 0.00 0.00 3.85
710 711 6.624423 AGCATTCACAAATCACAAAGTATCC 58.376 36.000 0.00 0.00 0.00 2.59
711 712 8.236586 TGTAGCATTCACAAATCACAAAGTATC 58.763 33.333 0.00 0.00 0.00 2.24
712 713 8.109705 TGTAGCATTCACAAATCACAAAGTAT 57.890 30.769 0.00 0.00 0.00 2.12
713 714 7.503521 TGTAGCATTCACAAATCACAAAGTA 57.496 32.000 0.00 0.00 0.00 2.24
714 715 6.389830 TGTAGCATTCACAAATCACAAAGT 57.610 33.333 0.00 0.00 0.00 2.66
715 716 6.864685 ACATGTAGCATTCACAAATCACAAAG 59.135 34.615 0.00 0.00 0.00 2.77
716 717 6.747125 ACATGTAGCATTCACAAATCACAAA 58.253 32.000 0.00 0.00 0.00 2.83
717 718 6.016443 TGACATGTAGCATTCACAAATCACAA 60.016 34.615 0.00 0.00 0.00 3.33
718 719 5.472820 TGACATGTAGCATTCACAAATCACA 59.527 36.000 0.00 0.00 0.00 3.58
719 720 5.941733 TGACATGTAGCATTCACAAATCAC 58.058 37.500 0.00 0.00 0.00 3.06
720 721 6.762702 ATGACATGTAGCATTCACAAATCA 57.237 33.333 0.00 0.00 31.99 2.57
721 722 7.675270 GAATGACATGTAGCATTCACAAATC 57.325 36.000 24.71 6.45 45.94 2.17
728 729 6.856135 TCTGATGAATGACATGTAGCATTC 57.144 37.500 23.65 23.65 46.52 2.67
729 730 7.818997 ATTCTGATGAATGACATGTAGCATT 57.181 32.000 11.45 11.45 41.00 3.56
742 743 3.324117 CGCGAGATCCATTCTGATGAAT 58.676 45.455 0.00 0.00 43.10 2.57
743 744 2.747436 CGCGAGATCCATTCTGATGAA 58.253 47.619 0.00 0.00 35.16 2.57
744 745 1.603931 GCGCGAGATCCATTCTGATGA 60.604 52.381 12.10 0.00 35.16 2.92
745 746 0.788995 GCGCGAGATCCATTCTGATG 59.211 55.000 12.10 0.00 33.74 3.07
746 747 0.390492 TGCGCGAGATCCATTCTGAT 59.610 50.000 12.10 0.00 33.74 2.90
747 748 0.175531 TTGCGCGAGATCCATTCTGA 59.824 50.000 12.10 0.00 33.74 3.27
748 749 0.580578 CTTGCGCGAGATCCATTCTG 59.419 55.000 20.57 0.00 33.74 3.02
749 750 0.461548 TCTTGCGCGAGATCCATTCT 59.538 50.000 23.66 0.00 37.41 2.40
750 751 0.579156 GTCTTGCGCGAGATCCATTC 59.421 55.000 29.35 12.40 0.00 2.67
751 752 0.811616 GGTCTTGCGCGAGATCCATT 60.812 55.000 29.35 0.00 0.00 3.16
752 753 1.227380 GGTCTTGCGCGAGATCCAT 60.227 57.895 29.35 0.00 0.00 3.41
753 754 2.184322 GGTCTTGCGCGAGATCCA 59.816 61.111 29.35 5.05 0.00 3.41
754 755 1.880340 CAGGTCTTGCGCGAGATCC 60.880 63.158 30.27 28.01 0.00 3.36
755 756 1.880340 CCAGGTCTTGCGCGAGATC 60.880 63.158 29.35 28.43 0.00 2.75
756 757 2.185350 CCAGGTCTTGCGCGAGAT 59.815 61.111 29.35 12.78 0.00 2.75
757 758 3.282745 GACCAGGTCTTGCGCGAGA 62.283 63.158 23.66 23.66 0.00 4.04
758 759 2.811317 GACCAGGTCTTGCGCGAG 60.811 66.667 19.15 19.15 0.00 5.03
759 760 3.282745 GAGACCAGGTCTTGCGCGA 62.283 63.158 23.78 0.00 43.53 5.87
760 761 2.811317 GAGACCAGGTCTTGCGCG 60.811 66.667 23.78 0.00 43.53 6.86
761 762 0.175760 TATGAGACCAGGTCTTGCGC 59.824 55.000 23.78 11.09 43.53 6.09
762 763 1.751351 TCTATGAGACCAGGTCTTGCG 59.249 52.381 23.78 12.19 43.53 4.85
763 764 3.895232 TTCTATGAGACCAGGTCTTGC 57.105 47.619 23.78 12.20 43.53 4.01
764 765 7.693969 AAAAATTCTATGAGACCAGGTCTTG 57.306 36.000 23.78 13.61 43.53 3.02
793 794 1.375523 CCTTCTCCCCCGTTGTTCG 60.376 63.158 0.00 0.00 39.52 3.95
794 795 0.036294 CTCCTTCTCCCCCGTTGTTC 60.036 60.000 0.00 0.00 0.00 3.18
795 796 0.473117 TCTCCTTCTCCCCCGTTGTT 60.473 55.000 0.00 0.00 0.00 2.83
796 797 0.905337 CTCTCCTTCTCCCCCGTTGT 60.905 60.000 0.00 0.00 0.00 3.32
797 798 0.614979 TCTCTCCTTCTCCCCCGTTG 60.615 60.000 0.00 0.00 0.00 4.10
798 799 0.615261 GTCTCTCCTTCTCCCCCGTT 60.615 60.000 0.00 0.00 0.00 4.44
799 800 1.000612 GTCTCTCCTTCTCCCCCGT 59.999 63.158 0.00 0.00 0.00 5.28
800 801 1.758906 GGTCTCTCCTTCTCCCCCG 60.759 68.421 0.00 0.00 0.00 5.73
801 802 0.030603 ATGGTCTCTCCTTCTCCCCC 60.031 60.000 0.00 0.00 37.07 5.40
878 890 2.112198 TTGTTGCCGCGATGATCCC 61.112 57.895 8.23 0.00 0.00 3.85
879 891 1.062525 GTTGTTGCCGCGATGATCC 59.937 57.895 8.23 0.00 0.00 3.36
911 923 2.336809 GTCTAGCCTGCGGATCGG 59.663 66.667 0.00 0.00 0.00 4.18
1249 1274 1.514228 CGTCGTCCTGGATCACGTG 60.514 63.158 9.94 9.94 37.30 4.49
1250 1275 1.645704 CTCGTCGTCCTGGATCACGT 61.646 60.000 22.27 0.00 37.30 4.49
1323 1348 2.054801 CTTCACGACGAAGCTCACG 58.945 57.895 0.00 10.87 44.57 4.35
1338 1363 1.134530 CGATCACGTCGCTGTCCTTC 61.135 60.000 0.00 0.00 44.33 3.46
1473 1498 4.796231 ACCGACATCCGCAGCGTC 62.796 66.667 15.05 3.36 36.84 5.19
1672 1697 4.208686 CCCGTGCCGGTAGAGCTC 62.209 72.222 5.27 5.27 46.80 4.09
1723 1748 2.035193 TGTAGATGAGATGCTTCGCCTC 59.965 50.000 0.96 1.29 0.00 4.70
1812 1840 3.842820 CGACTTCTTCTTGAGCAGATCA 58.157 45.455 0.00 0.00 35.62 2.92
1872 1900 2.974489 GACGCTTCTCGACGTGGGA 61.974 63.158 3.34 0.00 43.71 4.37
1881 1909 1.092345 GGATGCCAAGGACGCTTCTC 61.092 60.000 0.00 0.00 32.53 2.87
1884 1912 1.377725 CTGGATGCCAAGGACGCTT 60.378 57.895 0.00 0.00 30.80 4.68
1920 1951 8.190122 TCTGCAGCATTTTAATTAAATCGACAT 58.810 29.630 9.47 0.00 34.19 3.06
1987 2021 2.557924 AGCCAACGATGAAATTTGAGCA 59.442 40.909 0.00 0.00 0.00 4.26
2039 2082 8.918658 GGCATGTCATAATTTACATATGCAAAG 58.081 33.333 1.58 0.00 34.70 2.77
2043 2086 7.490079 CCATGGCATGTCATAATTTACATATGC 59.510 37.037 24.80 0.00 34.61 3.14
2064 2107 4.982241 ACCTTCCTACATATGACCATGG 57.018 45.455 11.19 11.19 0.00 3.66
2065 2108 6.826668 TGTAACCTTCCTACATATGACCATG 58.173 40.000 10.38 0.00 0.00 3.66
2068 2111 6.231211 CCATGTAACCTTCCTACATATGACC 58.769 44.000 10.38 0.00 37.79 4.02
2112 2158 6.307155 CGAAGAATGCTTGAAAAATCTACGT 58.693 36.000 0.00 0.00 33.61 3.57
2118 2164 5.841810 TGAACCGAAGAATGCTTGAAAAAT 58.158 33.333 0.00 0.00 33.61 1.82
2187 2233 9.995003 ATGAAATGAAATACAACCTTTTGCTTA 57.005 25.926 0.00 0.00 36.00 3.09
2202 2248 8.971073 AGTTTATTTCCTCGGATGAAATGAAAT 58.029 29.630 23.20 19.06 41.30 2.17
2245 2291 2.854963 TCATCAGCTCATTGCCCATAC 58.145 47.619 0.00 0.00 44.23 2.39
2348 2394 2.756760 AGCGACTATCTTCCGTTTACCA 59.243 45.455 0.00 0.00 0.00 3.25
2354 2400 1.471684 ACGAAAGCGACTATCTTCCGT 59.528 47.619 0.00 0.00 41.64 4.69
2512 2558 7.636150 AGAATTGATACATGAAAACCTCCAG 57.364 36.000 0.00 0.00 0.00 3.86
2555 2606 4.166011 GCATCGACACAAGCGGCC 62.166 66.667 0.00 0.00 0.00 6.13
2565 2616 3.119291 CTCATCAGTTACCTGCATCGAC 58.881 50.000 0.00 0.00 38.66 4.20
2697 2748 2.940994 TCGACAATTTCTTGGACCCA 57.059 45.000 0.00 0.00 36.64 4.51
2757 2808 1.135046 CGTCAATAGCTGCCATCTCG 58.865 55.000 0.00 0.00 0.00 4.04
2763 2814 0.855349 CATCGTCGTCAATAGCTGCC 59.145 55.000 0.00 0.00 0.00 4.85
2778 2829 6.701400 TGTCATTGTCATTGGAGTATACATCG 59.299 38.462 5.50 0.00 0.00 3.84
2805 2856 3.127791 ACCTGAACATCCCATCTCTCT 57.872 47.619 0.00 0.00 0.00 3.10
2867 2918 7.186804 AGTAAAACTGTTCAATGTTTCGACAG 58.813 34.615 0.00 0.00 42.48 3.51
2887 2938 6.015856 TCGGAAAATCTGCAATCCAAAGTAAA 60.016 34.615 0.00 0.00 32.08 2.01
2889 2940 5.007034 TCGGAAAATCTGCAATCCAAAGTA 58.993 37.500 0.00 0.00 32.08 2.24
2891 2942 4.439305 TCGGAAAATCTGCAATCCAAAG 57.561 40.909 0.00 0.00 32.08 2.77
2892 2943 4.438608 CGATCGGAAAATCTGCAATCCAAA 60.439 41.667 7.38 0.00 32.08 3.28
2898 2949 2.539688 CGATCGATCGGAAAATCTGCAA 59.460 45.455 34.54 0.00 45.93 4.08
2945 2996 2.003301 GTTGCTTCTCGTGGATCCTTC 58.997 52.381 14.23 5.40 0.00 3.46
3012 3063 5.003804 TCAGGTAAAACAAATGGAGCTCTC 58.996 41.667 14.64 4.40 0.00 3.20
3238 3293 4.823989 ACCTAGCATGCCATTAAGATCAAC 59.176 41.667 15.66 0.00 0.00 3.18
3239 3294 5.052693 ACCTAGCATGCCATTAAGATCAA 57.947 39.130 15.66 0.00 0.00 2.57
3240 3295 4.712051 ACCTAGCATGCCATTAAGATCA 57.288 40.909 15.66 0.00 0.00 2.92
3241 3296 4.823989 ACAACCTAGCATGCCATTAAGATC 59.176 41.667 15.66 0.00 0.00 2.75
3265 3320 7.695869 AAGTCGACACTAAAGACTAAACAAG 57.304 36.000 19.50 0.00 43.60 3.16
3275 3330 6.326375 AGAGATAGCAAAGTCGACACTAAAG 58.674 40.000 19.50 2.33 30.14 1.85
3351 3409 4.685924 CTGGCATGATGTGGGAAATTAAC 58.314 43.478 0.00 0.00 0.00 2.01
3387 3445 3.130516 GGCTGCCAGAAATTTAAGTACCC 59.869 47.826 15.17 0.00 0.00 3.69
3589 3651 7.619302 AGAGACATTGAGAGAGATAAAGAACCT 59.381 37.037 0.00 0.00 0.00 3.50
3590 3652 7.781056 AGAGACATTGAGAGAGATAAAGAACC 58.219 38.462 0.00 0.00 0.00 3.62
3594 3656 9.248291 GCTTTAGAGACATTGAGAGAGATAAAG 57.752 37.037 0.00 0.00 32.40 1.85
3595 3657 8.753133 TGCTTTAGAGACATTGAGAGAGATAAA 58.247 33.333 0.00 0.00 0.00 1.40
3608 3675 4.686191 AGCTGCTATGCTTTAGAGACAT 57.314 40.909 0.00 0.00 40.93 3.06
3622 3714 6.546428 AATGAAGGTTAGTAGAAGCTGCTA 57.454 37.500 0.90 0.00 0.00 3.49
3624 3716 6.293135 GCATAATGAAGGTTAGTAGAAGCTGC 60.293 42.308 0.00 0.00 0.00 5.25
3634 3726 6.820656 ACTTGACAGAGCATAATGAAGGTTAG 59.179 38.462 0.00 0.00 0.00 2.34
3635 3727 6.711277 ACTTGACAGAGCATAATGAAGGTTA 58.289 36.000 0.00 0.00 0.00 2.85
3648 3740 5.872070 AGCTATACTTCAAACTTGACAGAGC 59.128 40.000 0.00 0.12 36.83 4.09
3649 3741 6.183360 GCAGCTATACTTCAAACTTGACAGAG 60.183 42.308 0.00 0.00 36.83 3.35
3650 3742 5.639506 GCAGCTATACTTCAAACTTGACAGA 59.360 40.000 0.00 0.00 36.83 3.41
3651 3743 5.641209 AGCAGCTATACTTCAAACTTGACAG 59.359 40.000 0.00 0.00 36.83 3.51
3652 3744 5.551233 AGCAGCTATACTTCAAACTTGACA 58.449 37.500 0.00 0.00 36.83 3.58
3653 3745 6.370166 AGAAGCAGCTATACTTCAAACTTGAC 59.630 38.462 19.65 0.00 43.84 3.18
3654 3746 6.467677 AGAAGCAGCTATACTTCAAACTTGA 58.532 36.000 19.65 0.00 43.84 3.02
3655 3747 6.734104 AGAAGCAGCTATACTTCAAACTTG 57.266 37.500 19.65 0.00 43.84 3.16
3656 3748 9.103861 GAATAGAAGCAGCTATACTTCAAACTT 57.896 33.333 19.65 10.44 43.84 2.66
3657 3749 8.260818 TGAATAGAAGCAGCTATACTTCAAACT 58.739 33.333 19.65 6.92 43.84 2.66
3658 3750 8.425577 TGAATAGAAGCAGCTATACTTCAAAC 57.574 34.615 19.65 11.38 43.84 2.93
3661 3753 9.866798 CATATGAATAGAAGCAGCTATACTTCA 57.133 33.333 19.65 4.17 43.84 3.02
3662 3754 9.868277 ACATATGAATAGAAGCAGCTATACTTC 57.132 33.333 10.38 12.96 42.13 3.01
3679 3771 2.485479 GGCCAGGACGACACATATGAAT 60.485 50.000 10.38 0.00 0.00 2.57
3682 3774 0.177836 TGGCCAGGACGACACATATG 59.822 55.000 0.00 0.00 0.00 1.78
3683 3775 0.908910 TTGGCCAGGACGACACATAT 59.091 50.000 5.11 0.00 0.00 1.78
3684 3776 0.908910 ATTGGCCAGGACGACACATA 59.091 50.000 5.11 0.00 0.00 2.29
3685 3777 0.677731 CATTGGCCAGGACGACACAT 60.678 55.000 5.11 0.00 0.00 3.21
3687 3779 2.690778 GCATTGGCCAGGACGACAC 61.691 63.158 5.11 0.00 0.00 3.67
3688 3780 2.359850 GCATTGGCCAGGACGACA 60.360 61.111 5.11 0.00 0.00 4.35
3689 3781 2.359850 TGCATTGGCCAGGACGAC 60.360 61.111 5.11 0.00 40.13 4.34
3690 3782 2.046023 CTGCATTGGCCAGGACGA 60.046 61.111 5.11 0.00 40.13 4.20
3691 3783 1.243342 TTTCTGCATTGGCCAGGACG 61.243 55.000 5.11 0.00 40.13 4.79
3692 3784 0.968405 TTTTCTGCATTGGCCAGGAC 59.032 50.000 5.11 0.00 40.13 3.85
3693 3785 1.714541 TTTTTCTGCATTGGCCAGGA 58.285 45.000 5.11 0.00 40.13 3.86
3710 3810 4.629634 TCGTACATCATCTGCATCGTTTTT 59.370 37.500 0.00 0.00 0.00 1.94
3716 3816 7.257003 AGATTATCTCGTACATCATCTGCATC 58.743 38.462 0.00 0.00 0.00 3.91
3849 3949 0.458370 GTGGGTGAAAATGCATCGGC 60.458 55.000 0.00 0.00 41.68 5.54
3854 3954 0.755686 GGTTGGTGGGTGAAAATGCA 59.244 50.000 0.00 0.00 0.00 3.96
3884 3984 2.291089 TGCTTGCAATCCCTGATTCTCA 60.291 45.455 0.00 0.00 28.87 3.27
3885 3985 2.358267 CTGCTTGCAATCCCTGATTCTC 59.642 50.000 0.00 0.00 28.87 2.87
3886 3986 2.376109 CTGCTTGCAATCCCTGATTCT 58.624 47.619 0.00 0.00 28.87 2.40
3887 3987 1.202382 GCTGCTTGCAATCCCTGATTC 60.202 52.381 0.00 0.00 42.31 2.52
3888 3988 0.822164 GCTGCTTGCAATCCCTGATT 59.178 50.000 0.00 0.00 42.31 2.57
3893 3993 0.604578 TTTCAGCTGCTTGCAATCCC 59.395 50.000 9.47 0.00 45.94 3.85
3897 4002 2.363038 ACAGAATTTCAGCTGCTTGCAA 59.637 40.909 9.47 0.00 45.94 4.08
3905 4010 3.129988 GCCATTGCTACAGAATTTCAGCT 59.870 43.478 8.23 0.00 35.05 4.24
3919 4024 0.679002 CTGGTAGTGCTGCCATTGCT 60.679 55.000 9.36 0.00 44.27 3.91
3926 4031 2.124942 GGCTCCTGGTAGTGCTGC 60.125 66.667 0.00 0.00 0.00 5.25
3927 4032 1.078848 GTGGCTCCTGGTAGTGCTG 60.079 63.158 0.00 0.00 0.00 4.41
3933 4038 1.902508 CAGAAAGAGTGGCTCCTGGTA 59.097 52.381 0.00 0.00 0.00 3.25
3936 4041 2.847327 TTCAGAAAGAGTGGCTCCTG 57.153 50.000 0.00 0.00 0.00 3.86
3962 4074 2.292016 CTGATCGAGTACTGCTACTGGG 59.708 54.545 0.00 0.00 32.96 4.45
3963 4075 3.002862 GTCTGATCGAGTACTGCTACTGG 59.997 52.174 0.00 0.00 32.96 4.00
3967 4079 3.206964 CAGGTCTGATCGAGTACTGCTA 58.793 50.000 0.00 0.00 0.00 3.49
3970 4082 3.275143 AGACAGGTCTGATCGAGTACTG 58.725 50.000 0.00 0.00 38.75 2.74
3972 4084 4.082679 ACAAAGACAGGTCTGATCGAGTAC 60.083 45.833 2.15 0.00 40.36 2.73
3974 4086 2.894126 ACAAAGACAGGTCTGATCGAGT 59.106 45.455 2.15 0.00 40.36 4.18
3975 4087 3.057245 TCACAAAGACAGGTCTGATCGAG 60.057 47.826 2.15 0.00 40.36 4.04
3976 4088 2.890945 TCACAAAGACAGGTCTGATCGA 59.109 45.455 2.15 0.00 40.36 3.59
3977 4089 3.303881 TCACAAAGACAGGTCTGATCG 57.696 47.619 2.15 0.00 40.36 3.69
3978 4090 3.937706 CCATCACAAAGACAGGTCTGATC 59.062 47.826 2.15 0.00 40.36 2.92
3979 4091 3.328931 ACCATCACAAAGACAGGTCTGAT 59.671 43.478 2.15 0.00 40.36 2.90
3981 4093 3.131709 ACCATCACAAAGACAGGTCTG 57.868 47.619 2.15 0.00 40.36 3.51
3982 4094 3.136443 TGAACCATCACAAAGACAGGTCT 59.864 43.478 0.00 0.00 42.75 3.85
3983 4095 3.476552 TGAACCATCACAAAGACAGGTC 58.523 45.455 0.00 0.00 37.09 3.85
3984 4096 3.480470 CTGAACCATCACAAAGACAGGT 58.520 45.455 0.00 0.00 39.07 4.00
3985 4097 2.816087 CCTGAACCATCACAAAGACAGG 59.184 50.000 0.00 0.00 37.81 4.00
3987 4099 3.476552 GTCCTGAACCATCACAAAGACA 58.523 45.455 0.00 0.00 0.00 3.41
4215 4335 1.482182 GAGGGAATGGATTTGGTTGGC 59.518 52.381 0.00 0.00 0.00 4.52
4279 4402 1.268625 TGTACCCGTATATCTGCAGCG 59.731 52.381 9.47 6.25 0.00 5.18
4289 4412 0.672342 GCGACATCCTGTACCCGTAT 59.328 55.000 0.00 0.00 0.00 3.06
4475 4598 3.047877 CCGACCTTGCCGTTCCAC 61.048 66.667 0.00 0.00 0.00 4.02
4611 4734 7.254319 CCACTAATTTGTTAATCGTGCGTCTAT 60.254 37.037 0.00 0.00 0.00 1.98
4680 4803 2.489938 AAGAGCATAAAACTGCGGGA 57.510 45.000 0.00 0.00 46.86 5.14
4716 4839 2.006888 AGAAACCCATGCGAACATACG 58.993 47.619 0.00 0.00 33.67 3.06
4719 4844 2.228822 GTGAAGAAACCCATGCGAACAT 59.771 45.455 0.00 0.00 36.79 2.71
4721 4846 1.606668 TGTGAAGAAACCCATGCGAAC 59.393 47.619 0.00 0.00 0.00 3.95
4733 4858 5.572511 GCATGCGTGAAAATATTGTGAAGAA 59.427 36.000 10.93 0.00 0.00 2.52
4734 4859 5.094812 GCATGCGTGAAAATATTGTGAAGA 58.905 37.500 10.93 0.00 0.00 2.87
4735 4860 5.097529 AGCATGCGTGAAAATATTGTGAAG 58.902 37.500 13.01 0.00 0.00 3.02
4765 4890 3.499918 AGTATGTTCAGCTCAGCAAACAC 59.500 43.478 17.15 8.12 38.53 3.32
4766 4891 3.743521 AGTATGTTCAGCTCAGCAAACA 58.256 40.909 17.13 17.13 39.44 2.83
4776 4901 3.350219 TTCCCTGGAAGTATGTTCAGC 57.650 47.619 0.00 0.00 0.00 4.26
4839 4966 4.729227 ACCGTGGAACTTGTTTGAAATT 57.271 36.364 0.00 0.00 31.75 1.82
4902 5031 8.918658 GCATTCACAAAATCATGCGAAATATAT 58.081 29.630 0.00 0.00 33.19 0.86
4974 5103 2.225727 GGAAACTCGAATGAAACGGCTT 59.774 45.455 0.00 0.00 0.00 4.35
5078 5208 2.455674 TGAAGTGTGTCCGATTCAGG 57.544 50.000 0.00 0.00 0.00 3.86
5156 5288 1.338674 TGCCCACAGTCTACCATTTCG 60.339 52.381 0.00 0.00 0.00 3.46
5212 5344 7.201591 CGATTTGCTGATCTAGATTCAAACAGT 60.202 37.037 20.87 11.97 0.00 3.55
5213 5345 7.010830 TCGATTTGCTGATCTAGATTCAAACAG 59.989 37.037 20.87 16.94 0.00 3.16
5245 5377 4.098914 TGCTGATGGGTCTAAACTGTTT 57.901 40.909 10.98 10.98 0.00 2.83
5246 5378 3.788227 TGCTGATGGGTCTAAACTGTT 57.212 42.857 0.00 0.00 0.00 3.16
5253 5385 3.432186 GCACAACTATGCTGATGGGTCTA 60.432 47.826 0.00 0.00 42.62 2.59
5254 5386 2.681976 GCACAACTATGCTGATGGGTCT 60.682 50.000 0.00 0.00 42.62 3.85
5256 5388 1.755179 GCACAACTATGCTGATGGGT 58.245 50.000 0.00 0.00 42.62 4.51
5397 5542 7.440523 AACTATTCTAACCTGTGCTTTCAAG 57.559 36.000 0.00 0.00 0.00 3.02
5408 5553 6.303839 TGTTGCCTTCAAACTATTCTAACCT 58.696 36.000 0.00 0.00 33.37 3.50
5415 5560 7.818930 CACCAAATATGTTGCCTTCAAACTATT 59.181 33.333 0.00 0.00 33.37 1.73
5426 5571 5.221244 GGTAGGATTCACCAAATATGTTGCC 60.221 44.000 0.00 0.00 42.04 4.52
5430 5575 7.691993 ACTAGGTAGGATTCACCAAATATGT 57.308 36.000 0.00 0.00 42.04 2.29
5431 5576 7.385205 CGAACTAGGTAGGATTCACCAAATATG 59.615 40.741 0.00 0.00 42.04 1.78
5432 5577 7.070821 ACGAACTAGGTAGGATTCACCAAATAT 59.929 37.037 0.00 0.00 42.04 1.28
5433 5578 6.381994 ACGAACTAGGTAGGATTCACCAAATA 59.618 38.462 0.00 0.00 42.04 1.40
5434 5579 5.189145 ACGAACTAGGTAGGATTCACCAAAT 59.811 40.000 0.00 0.00 42.04 2.32
5436 5581 4.081862 CACGAACTAGGTAGGATTCACCAA 60.082 45.833 0.00 0.00 42.04 3.67
5437 5582 3.446161 CACGAACTAGGTAGGATTCACCA 59.554 47.826 0.00 0.00 42.04 4.17
5438 5583 3.446516 ACACGAACTAGGTAGGATTCACC 59.553 47.826 0.00 0.00 39.35 4.02
5439 5584 4.715527 ACACGAACTAGGTAGGATTCAC 57.284 45.455 0.00 0.00 0.00 3.18
5440 5585 5.533903 GGATACACGAACTAGGTAGGATTCA 59.466 44.000 0.00 0.00 0.00 2.57
5441 5586 5.334724 CGGATACACGAACTAGGTAGGATTC 60.335 48.000 0.00 0.00 35.47 2.52
5442 5587 4.518211 CGGATACACGAACTAGGTAGGATT 59.482 45.833 0.00 0.00 35.47 3.01
5443 5588 4.070716 CGGATACACGAACTAGGTAGGAT 58.929 47.826 0.00 0.00 35.47 3.24
5444 5589 3.118261 ACGGATACACGAACTAGGTAGGA 60.118 47.826 0.00 0.00 37.61 2.94
5445 5590 3.003068 CACGGATACACGAACTAGGTAGG 59.997 52.174 0.00 0.00 37.61 3.18
5446 5591 3.624861 ACACGGATACACGAACTAGGTAG 59.375 47.826 0.00 0.00 37.61 3.18
5447 5592 3.609853 ACACGGATACACGAACTAGGTA 58.390 45.455 0.00 0.00 37.61 3.08
5448 5593 2.440409 ACACGGATACACGAACTAGGT 58.560 47.619 0.00 0.00 37.61 3.08
5449 5594 3.547613 GCTACACGGATACACGAACTAGG 60.548 52.174 0.00 0.00 37.61 3.02
5450 5595 3.547613 GGCTACACGGATACACGAACTAG 60.548 52.174 0.00 0.00 37.61 2.57
5451 5596 2.355756 GGCTACACGGATACACGAACTA 59.644 50.000 0.00 0.00 37.61 2.24
5452 5597 1.133790 GGCTACACGGATACACGAACT 59.866 52.381 0.00 0.00 37.61 3.01
5453 5598 1.553308 GGCTACACGGATACACGAAC 58.447 55.000 0.00 0.00 37.61 3.95
5454 5599 0.099259 CGGCTACACGGATACACGAA 59.901 55.000 0.00 0.00 37.61 3.85
5455 5600 1.026182 ACGGCTACACGGATACACGA 61.026 55.000 0.00 0.00 38.39 4.35
5456 5601 0.179156 AACGGCTACACGGATACACG 60.179 55.000 0.00 0.00 38.39 4.49
5457 5602 1.553308 GAACGGCTACACGGATACAC 58.447 55.000 0.00 0.00 38.39 2.90
5458 5603 0.457035 GGAACGGCTACACGGATACA 59.543 55.000 0.00 0.00 38.39 2.29
5459 5604 0.457035 TGGAACGGCTACACGGATAC 59.543 55.000 0.00 0.00 38.39 2.24
5460 5605 1.405872 ATGGAACGGCTACACGGATA 58.594 50.000 0.00 0.00 38.39 2.59
5461 5606 0.539986 AATGGAACGGCTACACGGAT 59.460 50.000 0.00 0.00 38.39 4.18
5462 5607 0.322322 AAATGGAACGGCTACACGGA 59.678 50.000 0.00 0.00 38.39 4.69
5463 5608 0.725117 GAAATGGAACGGCTACACGG 59.275 55.000 0.00 0.00 38.39 4.94
5464 5609 1.393539 CTGAAATGGAACGGCTACACG 59.606 52.381 0.00 0.00 40.31 4.49
5465 5610 1.130561 GCTGAAATGGAACGGCTACAC 59.869 52.381 0.00 0.00 35.76 2.90
5466 5611 1.448985 GCTGAAATGGAACGGCTACA 58.551 50.000 0.00 0.00 35.76 2.74
5467 5612 0.733150 GGCTGAAATGGAACGGCTAC 59.267 55.000 0.00 0.00 38.32 3.58
5468 5613 0.393808 GGGCTGAAATGGAACGGCTA 60.394 55.000 0.00 0.00 38.32 3.93
5469 5614 1.678970 GGGCTGAAATGGAACGGCT 60.679 57.895 0.00 0.00 38.32 5.52
5470 5615 2.710902 GGGGCTGAAATGGAACGGC 61.711 63.158 0.00 0.00 37.63 5.68
5471 5616 1.304052 TGGGGCTGAAATGGAACGG 60.304 57.895 0.00 0.00 0.00 4.44
5472 5617 1.883021 GTGGGGCTGAAATGGAACG 59.117 57.895 0.00 0.00 0.00 3.95
5473 5618 0.608035 TCGTGGGGCTGAAATGGAAC 60.608 55.000 0.00 0.00 0.00 3.62
5474 5619 0.331278 ATCGTGGGGCTGAAATGGAA 59.669 50.000 0.00 0.00 0.00 3.53
5475 5620 0.107214 GATCGTGGGGCTGAAATGGA 60.107 55.000 0.00 0.00 0.00 3.41
5476 5621 0.107017 AGATCGTGGGGCTGAAATGG 60.107 55.000 0.00 0.00 0.00 3.16
5477 5622 1.755179 AAGATCGTGGGGCTGAAATG 58.245 50.000 0.00 0.00 0.00 2.32
5478 5623 3.644966 TTAAGATCGTGGGGCTGAAAT 57.355 42.857 0.00 0.00 0.00 2.17
5479 5624 3.541632 GATTAAGATCGTGGGGCTGAAA 58.458 45.455 0.00 0.00 0.00 2.69
5480 5625 2.158813 GGATTAAGATCGTGGGGCTGAA 60.159 50.000 0.00 0.00 32.84 3.02
5481 5626 1.416401 GGATTAAGATCGTGGGGCTGA 59.584 52.381 0.00 0.00 32.84 4.26
5482 5627 1.543429 GGGATTAAGATCGTGGGGCTG 60.543 57.143 0.00 0.00 32.84 4.85
5483 5628 0.765510 GGGATTAAGATCGTGGGGCT 59.234 55.000 0.00 0.00 32.84 5.19
5484 5629 0.602905 CGGGATTAAGATCGTGGGGC 60.603 60.000 0.00 0.00 32.84 5.80
5485 5630 1.000955 CTCGGGATTAAGATCGTGGGG 59.999 57.143 0.00 0.00 32.84 4.96
5486 5631 1.605712 GCTCGGGATTAAGATCGTGGG 60.606 57.143 0.00 0.00 32.84 4.61
5487 5632 1.068588 TGCTCGGGATTAAGATCGTGG 59.931 52.381 0.00 0.00 32.84 4.94
5488 5633 2.509052 TGCTCGGGATTAAGATCGTG 57.491 50.000 0.00 0.00 32.84 4.35
5489 5634 2.628178 TGATGCTCGGGATTAAGATCGT 59.372 45.455 0.00 0.00 32.84 3.73
5490 5635 2.989840 GTGATGCTCGGGATTAAGATCG 59.010 50.000 0.00 0.00 32.84 3.69
5491 5636 3.743396 GTGTGATGCTCGGGATTAAGATC 59.257 47.826 0.00 0.00 0.00 2.75
5492 5637 3.733337 GTGTGATGCTCGGGATTAAGAT 58.267 45.455 0.00 0.00 0.00 2.40
5493 5638 2.481276 CGTGTGATGCTCGGGATTAAGA 60.481 50.000 0.00 0.00 0.00 2.10
5494 5639 1.860950 CGTGTGATGCTCGGGATTAAG 59.139 52.381 0.00 0.00 0.00 1.85
5495 5640 1.478916 TCGTGTGATGCTCGGGATTAA 59.521 47.619 0.00 0.00 35.12 1.40
5496 5641 1.067060 CTCGTGTGATGCTCGGGATTA 59.933 52.381 0.00 0.00 36.76 1.75
5497 5642 0.179100 CTCGTGTGATGCTCGGGATT 60.179 55.000 0.00 0.00 36.76 3.01
5498 5643 1.439228 CTCGTGTGATGCTCGGGAT 59.561 57.895 0.00 0.00 36.76 3.85
5499 5644 2.885113 CTCGTGTGATGCTCGGGA 59.115 61.111 0.00 0.00 36.76 5.14
5500 5645 2.887568 GCTCGTGTGATGCTCGGG 60.888 66.667 0.00 0.00 37.60 5.14
5501 5646 2.004808 TAGGCTCGTGTGATGCTCGG 62.005 60.000 0.00 0.00 35.12 4.63
5502 5647 0.593518 CTAGGCTCGTGTGATGCTCG 60.594 60.000 0.00 0.00 35.64 5.03
5503 5648 0.249238 CCTAGGCTCGTGTGATGCTC 60.249 60.000 0.00 0.00 0.00 4.26
5504 5649 1.680522 CCCTAGGCTCGTGTGATGCT 61.681 60.000 2.05 0.00 0.00 3.79
5505 5650 1.227380 CCCTAGGCTCGTGTGATGC 60.227 63.158 2.05 0.00 0.00 3.91
5506 5651 0.103208 GTCCCTAGGCTCGTGTGATG 59.897 60.000 2.05 0.00 0.00 3.07
5507 5652 0.033011 AGTCCCTAGGCTCGTGTGAT 60.033 55.000 2.05 0.00 0.00 3.06
5508 5653 0.622136 TAGTCCCTAGGCTCGTGTGA 59.378 55.000 2.05 0.00 0.00 3.58
5509 5654 1.471119 TTAGTCCCTAGGCTCGTGTG 58.529 55.000 2.05 0.00 0.00 3.82
5510 5655 2.456073 ATTAGTCCCTAGGCTCGTGT 57.544 50.000 2.05 0.00 0.00 4.49
5511 5656 3.304525 CGTAATTAGTCCCTAGGCTCGTG 60.305 52.174 2.05 0.00 0.00 4.35
5512 5657 2.883386 CGTAATTAGTCCCTAGGCTCGT 59.117 50.000 2.05 0.00 0.00 4.18
5513 5658 2.883386 ACGTAATTAGTCCCTAGGCTCG 59.117 50.000 2.05 0.00 0.00 5.03
5514 5659 4.933505 AACGTAATTAGTCCCTAGGCTC 57.066 45.455 2.05 0.00 0.00 4.70
5515 5660 5.221402 GCTAAACGTAATTAGTCCCTAGGCT 60.221 44.000 2.05 0.00 35.70 4.58
5516 5661 4.987285 GCTAAACGTAATTAGTCCCTAGGC 59.013 45.833 2.05 0.00 35.70 3.93
5517 5662 5.536260 GGCTAAACGTAATTAGTCCCTAGG 58.464 45.833 0.06 0.06 35.70 3.02
5518 5663 5.218139 CGGCTAAACGTAATTAGTCCCTAG 58.782 45.833 6.13 0.00 34.70 3.02
5519 5664 4.499696 GCGGCTAAACGTAATTAGTCCCTA 60.500 45.833 6.13 0.00 34.70 3.53
5520 5665 3.739209 GCGGCTAAACGTAATTAGTCCCT 60.739 47.826 6.13 0.00 34.70 4.20
5521 5666 2.541346 GCGGCTAAACGTAATTAGTCCC 59.459 50.000 6.13 1.36 34.70 4.46
5522 5667 2.541346 GGCGGCTAAACGTAATTAGTCC 59.459 50.000 0.00 7.75 34.70 3.85
5523 5668 2.541346 GGGCGGCTAAACGTAATTAGTC 59.459 50.000 9.56 5.44 35.70 2.59
5524 5669 2.169144 AGGGCGGCTAAACGTAATTAGT 59.831 45.455 9.56 0.00 35.70 2.24
5525 5670 2.798847 GAGGGCGGCTAAACGTAATTAG 59.201 50.000 9.56 3.14 36.24 1.73
5526 5671 2.431782 AGAGGGCGGCTAAACGTAATTA 59.568 45.455 9.56 0.00 35.98 1.40
5527 5672 1.208776 AGAGGGCGGCTAAACGTAATT 59.791 47.619 9.56 0.00 35.98 1.40
5528 5673 0.828677 AGAGGGCGGCTAAACGTAAT 59.171 50.000 9.56 0.00 35.98 1.89
5529 5674 0.174162 GAGAGGGCGGCTAAACGTAA 59.826 55.000 9.56 0.00 35.98 3.18
5530 5675 0.682209 AGAGAGGGCGGCTAAACGTA 60.682 55.000 9.56 0.00 35.98 3.57
5531 5676 1.982938 AGAGAGGGCGGCTAAACGT 60.983 57.895 9.56 0.00 35.98 3.99
5532 5677 1.519455 CAGAGAGGGCGGCTAAACG 60.519 63.158 9.56 0.00 0.00 3.60
5533 5678 0.822164 TACAGAGAGGGCGGCTAAAC 59.178 55.000 9.56 0.00 0.00 2.01
5534 5679 1.563924 TTACAGAGAGGGCGGCTAAA 58.436 50.000 9.56 0.00 0.00 1.85
5535 5680 1.687123 GATTACAGAGAGGGCGGCTAA 59.313 52.381 9.56 0.00 0.00 3.09
5536 5681 1.133450 AGATTACAGAGAGGGCGGCTA 60.133 52.381 9.56 0.00 0.00 3.93
5537 5682 0.397816 AGATTACAGAGAGGGCGGCT 60.398 55.000 9.56 0.00 0.00 5.52
5538 5683 1.329256 TAGATTACAGAGAGGGCGGC 58.671 55.000 0.00 0.00 0.00 6.53
5539 5684 2.693591 TGTTAGATTACAGAGAGGGCGG 59.306 50.000 0.00 0.00 0.00 6.13
5540 5685 4.113354 GTTGTTAGATTACAGAGAGGGCG 58.887 47.826 0.00 0.00 0.00 6.13
5541 5686 4.081087 TGGTTGTTAGATTACAGAGAGGGC 60.081 45.833 0.00 0.00 0.00 5.19
5542 5687 5.677319 TGGTTGTTAGATTACAGAGAGGG 57.323 43.478 0.00 0.00 0.00 4.30
5543 5688 7.118496 AGATGGTTGTTAGATTACAGAGAGG 57.882 40.000 0.00 0.00 0.00 3.69
5552 5697 9.739276 TCTGTGAATTAAGATGGTTGTTAGATT 57.261 29.630 0.00 0.00 0.00 2.40
5553 5698 9.739276 TTCTGTGAATTAAGATGGTTGTTAGAT 57.261 29.630 0.00 0.00 0.00 1.98
5554 5699 9.567776 TTTCTGTGAATTAAGATGGTTGTTAGA 57.432 29.630 0.00 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.